BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039177
(453 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224091084|ref|XP_002309173.1| predicted protein [Populus trichocarpa]
gi|222855149|gb|EEE92696.1| predicted protein [Populus trichocarpa]
Length = 506
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 279/495 (56%), Positives = 347/495 (70%), Gaps = 56/495 (11%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
M ++ K A+ LRKHRKWP SPYKA+WH+ +QQQA Q++KQS PP QQ+ P +
Sbjct: 1 MASCTSKKSASFFLRKHRKWPYSPYKARWHRIFNQQQAMQSLKQSALKPP---QQESPNK 57
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
PH+LSSL+HSFSIY+ EP P+A+ F+ KTL + SQF I SVLDH+EK E+FE PE F
Sbjct: 58 PHLLSSLIHSFSIYDVEPAPKAFDFIFKTLVKTSQFHHIPSVLDHLEKVESFEPPESTFA 117
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFR---------------------------------- 146
LI+ Y ++ +++ LFY+IPKFR
Sbjct: 118 YLIEVYGRTNKTHEAIELFYRIPKFRCVPSVYSLNTLISVLCRNSKGLKLVPEILLKSQV 177
Query: 147 -------------------INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
+ +VGFAIE+LNCM+NDGF V+ + SL+LS +CEQ+D +
Sbjct: 178 MNIRVEESTFQVLITALCRVRKVGFAIEMLNCMVNDGFIVNAEIYSLLLSCLCEQKDATK 237
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
E++GF+++++KLGF GMVDY+NVIR LVK ++ DAL +LN MKSD IKPDI CYTMV
Sbjct: 238 FEVIGFLEQLRKLGFFPGMVDYSNVIRFLVKGKRGLDALHVLNHMKSDRIKPDIFCYTMV 297
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+GVI +DY+KA+ELFDELLV GLVPD YTYNVYINGLCKQNNV+AGIKM+A MEELG
Sbjct: 298 LHGVIEDKDYLKADELFDELLVFGLVPDAYTYNVYINGLCKQNNVQAGIKMVASMEELGC 357
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KP++ITYN L++ LCKV EL++ ELV+EM KGI LN+QTY IMIDGLAS G I+EACG
Sbjct: 358 KPNLITYNMLVKQLCKVGELSKAGELVREMGLKGIGLNMQTYRIMIDGLASNGKIVEACG 417
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L EEAL+KGLCTQS MFDE ICGLC R L KAL+LL++M K+VSPGAR W+ALLLSS
Sbjct: 418 LFEEALDKGLCTQSLMFDEIICGLCHRDLSCKALKLLEKMVGKNVSPGARAWKALLLSSG 477
Query: 428 SKLDFVNTSFIRLVD 442
KLD V T LVD
Sbjct: 478 FKLDSVETKLFSLVD 492
>gi|225439604|ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Vitis vinifera]
Length = 505
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/504 (48%), Positives = 316/504 (62%), Gaps = 57/504 (11%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
M+R + + N LRK RKWPLSPYKA WH+T +QA Q +K ++ Q P
Sbjct: 1 MLRPPSFSKTNF-LRKRRKWPLSPYKATWHETFHHRQAMQTLKNTIAN--QSPSPQSPSN 57
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
LS L+ SF IYN +P P AY FVI TL QF + +L +EK E FETPEFIF
Sbjct: 58 SQFLSILIDSFRIYNSDPTPNAYRFVISTLTRCRQFHHLPPLLHRLEKVEKFETPEFIFT 117
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFR---------------------------------- 146
+LIK Y +A+ F+D+V+LF++IP FR
Sbjct: 118 NLIKVYGNANMFEDAVDLFFRIPNFRCVPSVYSLNALLYVLCKRREGLVMVPQILLKSQA 177
Query: 147 -------------------INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
I + +AI ILN M+NDG+ VD K CS+ILSS+CEQ+ LS
Sbjct: 178 MNIRLEESSFRILVAALCRIKKHNYAIRILNYMLNDGYAVDAKMCSIILSSLCEQKGLSG 237
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE+L F++EM+KLGF G VD NVIR LVK+ V DALG+ +QMK+DGIKPD V YTM+
Sbjct: 238 DEVLRFMEEMRKLGFYPGRVDCNNVIRFLVKEGMVMDALGVFDQMKTDGIKPDTVSYTMI 297
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNGV DY KA++LFDE+LVLG+VPD++ YNVYIN LCKQNN+E G++M+A M ELG
Sbjct: 298 LNGVTADGDYEKADDLFDEMLVLGVVPDIHAYNVYINSLCKQNNIEEGVRMLASMRELGC 357
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD +TYN LL+ + KVR+L +REL +EM+ +G+ N +TY IM+DGL KG+I E+C
Sbjct: 358 KPDYVTYNMLLEGMSKVRDLGGMRELAREMELEGVQWNWETYRIMLDGLVGKGEIDESCS 417
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
LLEE L+K S FDE IC LCQRGLV KAL+L+ +M K ++PGAR WEALLL SV
Sbjct: 418 LLEEMLDKYFSCWCSTFDEIICELCQRGLVCKALQLVNKMVRKTIAPGARAWEALLLGSV 477
Query: 428 SKLDFVNTSFIRLVDQILNTPCKM 451
+ F TS LV+ I P ++
Sbjct: 478 -EFSFAETSLTELVNPIQIHPARL 500
>gi|357506483|ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498545|gb|AES79748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 653
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/498 (48%), Positives = 318/498 (63%), Gaps = 61/498 (12%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
MVR+ K AN +LRK RKWP SPYK WH +QQA Q + + K Q Q
Sbjct: 1 MVRNPLSKTANKYLRKFRKWPHSPYKTSWHHNFGEQQAIQILINA------KTQTQNNND 54
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAE--NSQFCDISSVLDHIEKRENFETPEFI 118
P +LS+L+HSF Y+ +P P+AY F+IKT+ S +I +L+H+E E FETPEFI
Sbjct: 55 PFLLSTLIHSFKAYHTDPSPKAYFFLIKTITNINTSHLHEIPHILNHLEHNEKFETPEFI 114
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFR-------------------------------- 146
F+ LI+ Y R QD+V+LF++IP+FR
Sbjct: 115 FMYLIRFYGFNDRVQDAVDLFFRIPRFRCTPTVCSLNLLLSLLCGKRECLRMVPDILLKS 174
Query: 147 ---------------------INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
I RV +AI+++NCM+ DG+C+D K CSLI+SS+CEQ DL
Sbjct: 175 RDMKIRLEESSFWVLIKALCRIKRVDYAIKMMNCMVEDGYCLDDKICSLIISSLCEQNDL 234
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+S E L M+KLGFC G++D TN+IR LVK+ K DAL ILNQ+K DGIKPDIVCYT
Sbjct: 235 TSVEALVVWGNMRKLGFCPGVMDCTNMIRFLVKEGKGMDALEILNQLKEDGIKPDIVCYT 294
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+VL+G++ + DYVK +ELFDE+LVLGLVPDVYTYNVYINGLCKQNN + +K++ ME+L
Sbjct: 295 IVLSGIVKEGDYVKLDELFDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKL 354
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G KP+V+TYNTLL ALC +L + + ++KEM+ KG+ LNL TY IM+DGL KG+I EA
Sbjct: 355 GCKPNVVTYNTLLGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEA 414
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C LLEE L K +SS FD + +CQ+GL+ AL L+ ++ K PGA+VWEALLL+
Sbjct: 415 CVLLEEMLEKCFYPRSSTFDSIVHQMCQKGLISDALVLMNKIVAKSFDPGAKVWEALLLN 474
Query: 426 SVSKLDFVNTSFIRLVDQ 443
S SK+ + T+F L+ +
Sbjct: 475 SESKVTYSETTFAGLLSK 492
>gi|356530205|ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Glycine max]
Length = 499
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/499 (47%), Positives = 316/499 (63%), Gaps = 55/499 (11%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
MVR KRAN +LRK +KWP SPYK WH ++QA +N+KQ+ + Q Q P
Sbjct: 1 MVRHPLSKRANKYLRKFKKWPHSPYKTSWHHNFGEEQAMKNLKQATLEMDSSQHPQRPNL 60
Query: 61 P--HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
P +LS+LL SF Y+ +P P+AY FV+KTL SQ DI VL H+E E FETPE I
Sbjct: 61 PCPFLLSTLLDSFKAYSIDPTPKAYFFVLKTLTSTSQLQDIPPVLYHLEHLEKFETPESI 120
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFR-------------------------------- 146
+ LI+ Y + R QD+V+LF++IP+FR
Sbjct: 121 LVYLIRFYGLSDRVQDAVDLFFRIPRFRCTPTVCSLNLVLSLLCRKRDCLEMVPEILLKS 180
Query: 147 ---------------------INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
I RVG+AI++LN M+ DG+ +D K CSL++S++CEQ+DL
Sbjct: 181 QHMNIRVEESTFRVLIRALCRIKRVGYAIKMLNFMVEDGYGLDEKICSLVISALCEQKDL 240
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+S E L ++M+KLGFC G++DYTN+IR LVK+ + DAL ILNQ K DGIK D+V YT
Sbjct: 241 TSAEALVVWRDMRKLGFCPGVMDYTNMIRFLVKEGRGMDALDILNQQKQDGIKLDVVSYT 300
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
MVL+G++ + +YV +ELFDE+LV+GL+PD YTYNVYINGLCKQNNV ++++A MEEL
Sbjct: 301 MVLSGIVAEGEYVMLDELFDEMLVIGLIPDAYTYNVYINGLCKQNNVAEALQIVASMEEL 360
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G KP+V+TYNTLL AL + + REL+KEM WKG+ LNL TY I++DGL KG+I E+
Sbjct: 361 GCKPNVVTYNTLLGALSVAGDFVKARELMKEMGWKGVGLNLHTYRIVLDGLVGKGEIGES 420
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C LLEE L K L +SS FD I +CQ+ L +A+EL K++ K PGA WEALLL+
Sbjct: 421 CLLLEEMLEKCLFPRSSTFDNIIFQMCQKDLFTEAMELTKKVVAKSFLPGASTWEALLLN 480
Query: 426 SVSKLDFVNTSFIRLVDQI 444
S SKL + +F L+ I
Sbjct: 481 SGSKLGYSKATFSGLLGPI 499
>gi|449440241|ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
gi|449483740|ref|XP_004156675.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
Length = 491
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/485 (47%), Positives = 308/485 (63%), Gaps = 64/485 (13%)
Query: 5 SALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHIL 64
S +K++N LRKHRKWPLS +K KWHQT DQ +A + +KQ+ P QPH+L
Sbjct: 6 SVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAAN----------PDQPHLL 55
Query: 65 -SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
S+L+ SF+ Y+C P P AY+FV+KTLA SQF I VL ++ ENF+TPE+IF+DLI
Sbjct: 56 LSALVTSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLI 115
Query: 124 KTYADAHRFQDSVNLFYKIPKFR------------------------------------- 146
K Y +R QD+V LF +IP FR
Sbjct: 116 KLYGRMNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGI 175
Query: 147 ----------------INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
+N+VG A+E+ N MI +G+ ++ + CSLIL+S+C+Q+ S D +
Sbjct: 176 RLEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVV 235
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
LGF++EM++ GFC +VDY+NVI+ V + DA+ +LN+MK+DG KPDIVCYTMVLNG
Sbjct: 236 LGFLEEMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNG 295
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
VI DY A+ELFDELL+ GLVPD+YTYNVYI+GLCKQ + AG++MI ME LG +P+
Sbjct: 296 VIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPN 355
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
VITYN +L++LCK EL+ R+L +M+ KG+ NL+T+ IMIDGL G++IEAC LLE
Sbjct: 356 VITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLE 415
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
E L Q S F E + LC+R +V KA+ELL M K+ SPG + WE LLLSS S+L
Sbjct: 416 EMLGSRFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESEL 475
Query: 431 DFVNT 435
V +
Sbjct: 476 TSVKS 480
>gi|147799110|emb|CAN63706.1| hypothetical protein VITISV_013107 [Vitis vinifera]
Length = 390
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/373 (51%), Positives = 250/373 (67%), Gaps = 7/373 (1%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
M+R + + N LRK RKWPLSPYKA WH+T +QA Q +K ++ Q P
Sbjct: 3 MLRPPSFSKTNF-LRKRRKWPLSPYKATWHETFHHRQAMQTLKNTIAN--QSPSPQSPSN 59
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
LS L+ SF IYN +P P AY FVI TL QF + +L +EK E FETPEFIF
Sbjct: 60 SQFLSILIDSFRIYNSDPTPNAYRFVISTLTRCRQFHHLPPLLHRLEKVEKFETPEFIFT 119
Query: 121 DLIKTYADAH----RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+LIK + R ++S RI + +AI ILN M+NDG+ VD K CS+IL
Sbjct: 120 NLIKILLKSQAMNIRLEESSFRILVAALCRIKKHNYAIRILNYMLNDGYAVDAKMCSIIL 179
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
SS+CEQ+ LS DE+L F++EM+KLGF G VD NVI LVK+ V DALG+ +QMK+DG
Sbjct: 180 SSLCEQKGLSGDEVLRFMEEMRKLGFYPGRVDCNNVIXFLVKEGMVMDALGVFDQMKTDG 239
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
IKPD V YTM+LNGV DY KA++LFDE+LVLG+VPD++ YNVYIN LCKQNN+E G+
Sbjct: 240 IKPDTVSYTMILNGVTADGDYEKADDLFDEMLVLGVVPDIHAYNVYINSLCKQNNIEEGV 299
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+M+A M ELG KPD + YN LL+ + KVR+L +REL +EM+ +G+ N +TY IM+DGL
Sbjct: 300 RMLASMRELGCKPDYVXYNMLLEGMSKVRDLGGMRELAREMELEGVQWNWETYRIMLDGL 359
Query: 357 ASKGDIIEACGLL 369
KG+I E+C L+
Sbjct: 360 VGKGEIDESCSLV 372
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 106/225 (47%), Gaps = 18/225 (8%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+TN+I+ L+K + A+ I + S I +C I + +Y A + + +L
Sbjct: 118 FTNLIKILLKSQ----AMNIRLEESSFRILVAALCR-------IKKHNY--AIRILNYML 164
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE---LGSKPDVITYNTLLQALCKVR 325
G D ++ ++ LC+Q + +G +++ MEE LG P + N ++ L K
Sbjct: 165 NDGYAVDAKMCSIILSSLCEQKGL-SGDEVLRFMEEMRKLGFYPGRVDCNNVIXFLVKEG 223
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + +MK GI + +Y+++++G+ + GD +A L +E L G+ ++
Sbjct: 224 MVMDALGVFDQMKTDGIKPDTVSYTMILNGVTADGDYEKADDLFDEMLVLGVVPDIHAYN 283
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
I LC++ + + + +L M + P V +LL +SK+
Sbjct: 284 VYINSLCKQNNIEEGVRMLASMRELGCKPDY-VXYNMLLEGMSKV 327
>gi|255586345|ref|XP_002533822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526239|gb|EEF28557.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 373
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/295 (62%), Positives = 228/295 (77%), Gaps = 2/295 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
IN+VG+A+E+ NCMINDGF VD K CSL+LSS+C Q D+SS E++ F+ E++K GFC G+
Sbjct: 69 INKVGYAVEMFNCMINDGFSVDSKICSLLLSSLCYQADISSSEVMRFLGELRKFGFCPGI 128
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
DY+ VI LV++ +AL +LNQMK DGIKPDIVCYT VLNGVI Y KA+ELFDE
Sbjct: 129 KDYSKVINFLVRRGMGMEALNVLNQMKLDGIKPDIVCYTTVLNGVIANGVYSKADELFDE 188
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
LLV GLVPDVYTYNVYI GLCKQNNVEAGI+M+ MEELG KP++ITYN LL+ LCK E
Sbjct: 189 LLVFGLVPDVYTYNVYIYGLCKQNNVEAGIEMVTSMEELGCKPNLITYNILLEDLCKNGE 248
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+R R+LV++M KGI L +QTY +MI GL S G I++AC LLEEAL+KGLC + FDE
Sbjct: 249 DSRARDLVRDMGSKGIGLGMQTYKVMIHGLTSGGKIVKACSLLEEALDKGLCPRGLRFDE 308
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLV 441
I GLCQ G + KALELL+++ +K+VSPG RVWE LLL S ++FV +FI LV
Sbjct: 309 VIYGLCQTGSICKALELLEKVVNKNVSPGVRVWETLLLK--SNINFVEDTFIDLV 361
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 37/183 (20%)
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK---------VRELN 328
++ + IN LC N V ++M CM G D + LL +LC +R L
Sbjct: 58 SFRLLINALCSINKVGYAVEMFNCMINDGFSVDSKICSLLLSSLCYQADISSSEVMRFLG 117
Query: 329 RLRE----------------------------LVKEMKWKGIVLNLQTYSIMIDGLASKG 360
LR+ ++ +MK GI ++ Y+ +++G+ + G
Sbjct: 118 ELRKFGFCPGIKDYSKVINFLVRRGMGMEALNVLNQMKLDGIKPDIVCYTTVLNGVIANG 177
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+A L +E L GL ++ I GLC++ V +E++ M + P +
Sbjct: 178 VYSKADELFDELLVFGLVPDVYTYNVYIYGLCKQNNVEAGIEMVTSMEELGCKPNLITYN 237
Query: 421 ALL 423
LL
Sbjct: 238 ILL 240
>gi|334184790|ref|NP_181376.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546769|sp|Q8L6Y7.2|PP193_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g38420, mitochondrial; Flags: Precursor
gi|3395430|gb|AAC28762.1| hypothetical protein [Arabidopsis thaliana]
gi|330254441|gb|AEC09535.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 186/460 (40%), Positives = 276/460 (60%), Gaps = 61/460 (13%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
M RSS+ R + +RK+RK P S +K KW++ L Q+ A + ++ +L T +
Sbjct: 1 MARSSSWHRMSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDS--------EN 52
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
++ +LL SF ++NCEP P+AY FVIKTLA++SQ +ISSVL H+E E F+TPE IF
Sbjct: 53 ASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFR 112
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFR---------------------------------- 146
D+I Y + R ++++ +F+KIP FR
Sbjct: 113 DVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACR 172
Query: 147 -------------------INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
I V A E++ M D VD + S +LSSVC+ +D S
Sbjct: 173 MGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSC 232
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+++G++++++K F G+ DYT V+R LV+ + + + +LNQMK D ++PD+VCYT+V
Sbjct: 233 FDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIV 292
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L GVI EDY KA++LFDELL+LGL PDVYTYNVYINGLCKQN++E +KM++ M +LGS
Sbjct: 293 LQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGS 352
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+V+TYN L++AL K +L+R + L KEM+ G+ N T+ IMI +++ A G
Sbjct: 353 EPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHG 412
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
LLEEA N + +SS +E I LC++GL+ +A+ELL +
Sbjct: 413 LLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
>gi|22655258|gb|AAM98219.1| unknown protein [Arabidopsis thaliana]
gi|31376375|gb|AAP49514.1| At2g38420 [Arabidopsis thaliana]
Length = 444
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/447 (40%), Positives = 269/447 (60%), Gaps = 61/447 (13%)
Query: 14 LRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSI 73
+RK+RK P S +K KW++ L Q+ A + ++ +L T + ++ +LL SF +
Sbjct: 5 MRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDS--------ENASVMRTLLSSFQL 56
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
+NCEP P+AY FVIKTLA++SQ +ISSVL H+E E F+TPE IF D+I Y + R +
Sbjct: 57 HNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIE 116
Query: 134 DSVNLFYKIPKFR----------------------------------------------- 146
+++ +F+KIP FR
Sbjct: 117 EAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGIL 176
Query: 147 ------INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
I V A E++ M D VD + S +LSSVC+ +D S +++G++++++K
Sbjct: 177 IDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKT 236
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
F G+ DYT V+R LV+ + + + +LNQMK D ++PD+VCYT+VL GVI EDY KA
Sbjct: 237 RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKA 296
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
++LFDELL+LGL PDVYTYNVYINGLCKQN++E +KM++ M +LGS+P+V+TYN L++A
Sbjct: 297 DKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKA 356
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L K +L+R + L KEM+ G+ N T+ IMI +++ A GLLEEA N + +
Sbjct: 357 LVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVK 416
Query: 381 SSMFDETICGLCQRGLVRKALELLKQM 407
SS +E I LC++GL+ +A+ELL +
Sbjct: 417 SSRIEEVISRLCEKGLMDQAVELLAHL 443
>gi|297823723|ref|XP_002879744.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325583|gb|EFH56003.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 444
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/447 (40%), Positives = 268/447 (59%), Gaps = 61/447 (13%)
Query: 14 LRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSI 73
+RK+RK P S +K KW++ L Q+ A + ++ +L + ++ +L+ SF +
Sbjct: 5 MRKYRKIPQSSFKTKWNENLKQKYAMEELRSNLLADS--------ENGSVMRTLVSSFQL 56
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
+NCEP P+AY FVI+TLA+ SQ +I+SVLDH+E E F+TPE IF D+I Y + R +
Sbjct: 57 HNCEPTPQAYRFVIETLAKTSQLENIASVLDHLEVSEKFDTPESIFRDVIAAYGFSGRIE 116
Query: 134 DSVNLFYKIPKF------------------------------------------------ 145
+++++F+KIP F
Sbjct: 117 EAIDVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKASRMGVRLEESTFGIL 176
Query: 146 -----RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
RI V A E++ M D VD + SL+LSSVC+ +D S +++G++++++K
Sbjct: 177 INALCRIGEVDCATELVRYMSEDSVIVDPRLYSLLLSSVCKHKDSSCFDVIGYLEDLRKT 236
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
F G+ DYT V+R LV+ + + + +LNQMK D I PD+VCYT+VL GVI EDY KA
Sbjct: 237 RFLPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRIDPDVVCYTIVLLGVIADEDYPKA 296
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
++LFDELL+LGL PDVYTYNVYINGLCKQN++E IKM++ M +LGS+P+V+TYN +++
Sbjct: 297 DKLFDELLLLGLDPDVYTYNVYINGLCKQNDIEGAIKMMSSMNKLGSEPNVVTYNIVIKG 356
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L K +L+R + L KEM+ G+ N TY IMI +++ A GLLEEA N L +
Sbjct: 357 LVKAGDLSRAKTLWKEMEMNGVNRNSHTYDIMISAYIEVDEVVCAQGLLEEAFNMNLFVK 416
Query: 381 SSMFDETICGLCQRGLVRKALELLKQM 407
SS +E I LC++GL+ KA+ELL +
Sbjct: 417 SSKIEEVISRLCEKGLMDKAVELLAHL 443
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 147/262 (56%), Gaps = 2/262 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M+ +G + T ++I+ V Q DL ++ LGF+++M+K G +V Y +
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDL--EKGLGFMRKMEKEGISPNVVTYNTL 248
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + KK+KV +A+ +L M G+ +++ Y V+NG+ + + EL +E+ GL
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPD TYN +NG CK+ N+ G+ +++ M G P+V+TY TL+ +CK L+R E
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M+ +G+ N +TY+ +IDG KG + EA +L E + G ++ + G C
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428
Query: 393 QRGLVRKALELLKQMADKDVSP 414
G V++A+ +L+ M ++ + P
Sbjct: 429 FLGRVQEAVGILRGMVERGLPP 450
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 120/217 (55%), Gaps = 5/217 (2%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ-----EDYVKAEELFDE 266
V++SL + V AL +L+ G P ++ Y VL+ ++ + DY AE +F +
Sbjct: 138 VVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRD 197
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G+ P+VYTYNV I G+ Q ++E G+ + ME+ G P+V+TYNTL+ A CK ++
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ L++ M G+ NL +Y+ +I+GL KG + E L+EE KGL ++
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C+ G + + L LL +M K +SP + L+
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLI 354
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 142/280 (50%), Gaps = 5/280 (1%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
K R++ VG E++ M G D T + +++ C++ +L +L + EM G
Sbjct: 290 KGRMSEVG---ELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVL--LSEMVGKGLS 344
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V YT +I + K + A+ I +QM+ G++P+ YT +++G + +A ++
Sbjct: 345 PNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKV 404
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E++V G P V TYN ++G C V+ + ++ M E G PDV++Y+T++ C+
Sbjct: 405 LSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCR 464
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
REL + ++ +EM KG++ + TYS +I GL + ++EA L E + +GL
Sbjct: 465 ERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVT 524
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I C G + KAL L +M + P + L+
Sbjct: 525 YTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLI 564
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 138/278 (49%), Gaps = 14/278 (5%)
Query: 148 NRVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
NR GFA +L N +++ +L+ S RD E + ++M + G
Sbjct: 159 NRHGFAPTVLSYNAVLD----------ALLRRSSSNHRDYDDAERV--FRDMVRNGVSPN 206
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +IR +V + + LG + +M+ +GI P++V Y +++ ++ +A L
Sbjct: 207 VYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLR 266
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ V G+ ++ +YN INGLC + + +++ M G PD +TYNTL+ CK
Sbjct: 267 AMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEG 326
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L++ L+ EM KG+ N+ TY+ +I+ + G++ A + ++ +GL +
Sbjct: 327 NLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYT 386
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G CQ+GL+ +A ++L +M SP + AL+
Sbjct: 387 TLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 152/277 (54%), Gaps = 2/277 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI G + T S+++ ++C+ R + + + M K G +V Y ++
Sbjct: 173 MIAKGIFPNVYTFSILVDALCKDR--KGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLV 230
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V AL I N M +G++P++ CY +++NG+ ++ +A LF E+ + PDV TY
Sbjct: 231 NQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTY 290
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ I+GLCK + ++++ M +G D+ITYN+LL ALCK L++ LVKE+K
Sbjct: 291 NILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKD 350
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+GI N+ TY+ +IDGL G + +A + +E L +G ++ I GLC++GL +
Sbjct: 351 QGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDE 410
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
AL LL +M D P A +E ++ + K + V T+
Sbjct: 411 ALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTN 447
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 137/264 (51%), Gaps = 5/264 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
++ GF +D + +++++ +C+ E +Q ++K +V Y+ +I SL K
Sbjct: 106 VVAHGFKLDQVSYAILMNGLCKM-----GETRAAMQMLRKTWVNADVVMYSTIIDSLCKG 160
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ V DA + ++M + GI P++ ++++++ + +A L ++ G+ P+V TY
Sbjct: 161 KFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTY 220
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
++G C N V + + M + G +P+V YN ++ LCK + ++ L KEM W
Sbjct: 221 GAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHW 280
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
K I ++ TY+I+IDGL G I + L++E + G ++ + LC+ + +
Sbjct: 281 KKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQ 340
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A+ L+K++ D+ + P + L+
Sbjct: 341 AITLVKEIKDQGIQPNVCTYTTLI 364
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 127/238 (53%), Gaps = 2/238 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L KK++V +A+ + +M I PD+V Y ++++G+ + EL DE+
Sbjct: 255 YNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMR 314
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+G D+ TYN ++ LCK ++++ I ++ +++ G +P+V TY TL+ LCK L
Sbjct: 315 SIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLE 374
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ +E+ +G + + TY++MI+GL KG EA LL + + ++ I
Sbjct: 375 DAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETII 434
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
L ++G K +LL M + +S R+ + + +++++ L+ ++ L D +++
Sbjct: 435 YALSEKGETVKTNKLLCAMIVRGLS--KRLKKKVNMTTIADLNDKWAAYASLEDGMIH 490
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+IN AI + + +G T +++++ C ++ L + ++ K+G+
Sbjct: 22 KINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITF--LFSILTKILKMGYEPN 79
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV-----------IVQ 254
+ +T +I+ + + ++AL + + + G K D V Y +++NG+ +++
Sbjct: 80 SITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLR 139
Query: 255 EDYVKAE---------------------ELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
+ +V A+ L+ E++ G+ P+VYT+++ ++ LCK +
Sbjct: 140 KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGK 199
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ ++A M + G KP+V+TY ++ C V ++N+ + M +G+ N+ Y+I+I
Sbjct: 200 QAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIII 259
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+GL K + EA L +E K + ++ I GLC+ G + +LEL+ +M
Sbjct: 260 NGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEM 313
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
IL ++ G +P+ + +T ++ G+ + +A D ++ G D +Y + +NG
Sbjct: 65 FSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNG 124
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LCK A ++M + + DV+ Y+T++ +LCK + + L EM KGI N
Sbjct: 125 LCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPN 181
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ T+SI++D L +A LL + KG+ + + G C V KAL +
Sbjct: 182 VYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFN 241
Query: 406 QMADKDVSPGARVW 419
M + V P VW
Sbjct: 242 VMVQEGVEP--NVW 253
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P I+ + +L ++ Y A LF +L G+ P + T + +N C + +
Sbjct: 8 PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ + ++G +P+ IT+ TL++ +C + + G L+ +Y+I+++GL
Sbjct: 68 LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127
Query: 359 KGDIIEACGLLEEA-LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G+ A +L + +N + S++ D LC+ V A L +M K + P
Sbjct: 128 MGETRAAMQMLRKTWVNADVVMYSTIIDS----LCKGKFVTDAYRLYSEMIAKGIFPNVY 183
Query: 418 VWEALL 423
+ L+
Sbjct: 184 TFSILV 189
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L + P + +N + L K N+ I + +E G KP ++T L+ C
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ L ++ ++ G N T++ +I G+ G EA + + G +
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120
Query: 387 TICGLCQRGLVRKALELL-KQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ GLC+ G R A+++L K + DV V + ++ S+ K FV ++ RL +++
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNADV-----VMYSTIIDSLCKGKFVTDAY-RLYSEMI 174
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 179/360 (49%), Gaps = 18/360 (5%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P YH VIK+L + +Q ++LD + R F+ ++ L + + R +D++
Sbjct: 158 PDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVR-GFKPEVSVYTILTRAFCKTGRLKDALE 216
Query: 138 LFYKIPK-------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+F IP R N A+E L M D T ++++ +C+
Sbjct: 217 IFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKAS- 275
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+D+ + EM G V + +++ L K K A +L M +P Y
Sbjct: 276 -KTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTY 334
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++G+ Q++ +A++L DE + G VPDV TY++ +GLCK+ ++ +++ M
Sbjct: 335 NTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSG 394
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G P+++TYNTL+ LCK + + EL++ + G V ++ TY+I++DGL +G + +
Sbjct: 395 KGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDK 454
Query: 365 ACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A ++E L +G CT S + + + GLC+ G V +A + K+M KD + A + +L+
Sbjct: 455 ALKMVEGMLKRG-CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 31/269 (11%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
SSD + + M G+ Y VI+SL + ++ A +L++ K G KP++ YT
Sbjct: 140 SSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYT 199
Query: 246 M-------------------------------VLNGVIVQEDYVKAEELFDELLVLGLVP 274
+ +++G + D A E E+ + P
Sbjct: 200 ILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAP 259
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
DV+TYN+ I+GLCK + + +M+ M + G PD +T+N+++ LCK + R L+
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 319
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M + + TY+ +I GL + ++ A L++E ++ G + GLC+R
Sbjct: 320 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKR 379
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G + +A EL+K+M+ K +P + L+
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLI 408
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 137/290 (47%), Gaps = 24/290 (8%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
++ L+ Y + R +++ + I R I++ N ++ DG+C +G+
Sbjct: 509 YVSLVNGYCKSSRTKEAQKVVDGI------RGTPYIDVYNALM-DGYCKEGRL------- 554
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
DE+ ++M G + Y V+ L K KV +A L M S G
Sbjct: 555 ---------DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCV 605
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD+V Y ++++G+ +A ++ D+++ G+ PD TYN + CK+ + + +
Sbjct: 606 PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGI 665
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL-QTYSIMIDGLA 357
+ M + G PD +TYNTL+ L + L EL+ EM G V++ TY+ +ID L
Sbjct: 666 LKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLC 725
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+G + +A L++ G+ + ++ I LC+ G + +A LL +M
Sbjct: 726 KEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 34/287 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L +++ GF D T ++I+ +C++ L D+ L V+ M K G ++ YT +
Sbjct: 420 AYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL--DKALKMVEGMLKRGCTPSVITYTAL 477
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV--------------------- 251
+ L + +V +A I +M S D + Y ++NG
Sbjct: 478 MEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY 537
Query: 252 -----IVQEDYVKAEEL------FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+ + Y K L F+++ G VP++ TYN+ ++GLCK V+ +
Sbjct: 538 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 597
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M G PDV++YN ++ L K + R+++ +M GI + TY+ ++ +
Sbjct: 598 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 657
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+A G+L+ + G+ + ++ I GL Q + A EL+ +M
Sbjct: 658 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 704
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 154/324 (47%), Gaps = 25/324 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L S C P +Y+ +I L + S+ + VLD + + + L+ +
Sbjct: 595 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM-IQAGIPPDAVTYNTLMAQF 653
Query: 127 ADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDG 169
RF D+V + + K + NR+G A E+++ M+ +G V
Sbjct: 654 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 713
Query: 170 -KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + I+ +C++ L LL + M G V Y I L K+ ++ +A +
Sbjct: 714 CTTYNTIIDRLCKEGCLKQALLL--MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 771
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLGLVPDVYTYNVYINGLC 287
L++M D ++ D V YT V+ G+ E +A +L E++ V GL +T+N+ I+
Sbjct: 772 LSEM--DTLR-DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFT 828
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K ++ + ++ M + G P VITYN ++ LCK+ ++++ EL EM +GIV +
Sbjct: 829 KTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSV 888
Query: 348 TYSIMIDGLASKGDIIEACGLLEE 371
+Y+++I GL +G EA +LEE
Sbjct: 889 SYTVLIYGLCGQGRGKEALQVLEE 912
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G +T N ++ L + + + M M + G PD TY+ ++++LC++ ++++
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
++ + K +G + Y+I+ G + +A + + + ++ I G
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSP----DAIAYNAIIHG 235
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
C++ ALE LK+M ++ V+P + L+ L SK D + +VD+
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDR 290
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 150/280 (53%), Gaps = 2/280 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI V A+EIL+ M+ +GF D T + ++ +C+ ++ +E + + +M F
Sbjct: 328 RIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEV--EEAVEILNQMILRDFSPN 385
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I +L K+ +V +A + + S GI PD+ + ++ G+ + ++ A ELF+
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFE 445
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PD +TYN+ I+ LC + +E + ++ ME G +V+TYNTL+ CK +
Sbjct: 446 EMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNK 505
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ E+ EM+ +GI N+ TY+ +IDGL + EA L+++ L +GL ++
Sbjct: 506 RIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYN 565
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ C+ G ++KA ++++ M P + + L+L
Sbjct: 566 SLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILG 605
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ I M+ G T ++++ C++ + +E+L F+ EM GF + ++
Sbjct: 265 ALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRI--EEVLSFIDEMSNEGFRPDRFTFNSL 322
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L + V AL IL+ M +G PDI Y ++ G+ + +A E+ +++++
Sbjct: 323 VNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDF 382
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN I+ LCK+N VE ++ + G PDV T+N+L+Q LC E
Sbjct: 383 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAME 442
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +EMK KG + TY+++ID L S+G + EA LL+E + G ++ I G C
Sbjct: 443 LFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFC 502
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + +A E+ +M + +S + L+
Sbjct: 503 KNKRIEEAEEIFDEMELQGISRNVVTYNTLI 533
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 150/299 (50%), Gaps = 5/299 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N A+E+ M G D T ++++ S+C + L +E L ++EM+ G +V
Sbjct: 435 NNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRL--EEALSLLKEMESSGCSRNVV 492
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I K +++ +A I ++M+ GI ++V Y +++G+ +A +L D++
Sbjct: 493 TYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L+ GL PD +TYN + C+ +++ ++ M G +PD +TY TL+ L K +
Sbjct: 553 LMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRV 612
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
L++ ++ KG+VL QTY+ +I L + EA L E + KG + +
Sbjct: 613 ELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVV 672
Query: 388 ICGLCQ-RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
GLC G + +A++ L +M DK P + +L + L +T I+LV++++
Sbjct: 673 FRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSF-LMLAEGLCALSMEDT-LIKLVNRVM 729
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 138/278 (49%), Gaps = 6/278 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG--FVQEMKKLGFCFG 205
N+V A E+ + + G D T + ++ +C L+++ L +EMK G
Sbjct: 400 NQVEEATELARVLTSKGILPDVCTFNSLIQGLC----LTNNHRLAMELFEEMKTKGCHPD 455
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I SL + ++ +AL +L +M+S G ++V Y +++G + +AEE+FD
Sbjct: 456 EFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFD 515
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + G+ +V TYN I+GLCK VE +++ M G KPD TYN+LL C+
Sbjct: 516 EMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAG 575
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + ++V+ M G + TY +I GL+ G + A LL KG+ ++
Sbjct: 576 DIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYN 635
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I L + +A+ L ++M +K P A ++ +
Sbjct: 636 PVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVF 673
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 186/425 (43%), Gaps = 34/425 (8%)
Query: 36 QQAKQNVKQSLTTPPTKQ--QQQIPKQ-----------PHILSSLLHSFSIYNCEPPPEA 82
QQA +L+ PT Q Q PKQ IL L + N P
Sbjct: 48 QQAVSPSFSTLSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVI 107
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF--- 139
Y V++ L ++ F + VL + K E F+ LI++YA F ++V +
Sbjct: 108 YEEVLRKLGKDGSFGSMRRVLQEM-KHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIM 166
Query: 140 -----YKIPKFRINRVGFA---------IEILNC-MINDGFCVDGKTCSLILSSVCEQRD 184
K+ F N + +EI+N M++ G D T ++++ ++C
Sbjct: 167 EEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQ 226
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ L+ ++EM G +T +++ +++ + AL I QM + G V
Sbjct: 227 IRPAILM--MEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTV 284
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++++G + + DE+ G PD +T+N +NGLC+ +V+ ++++ M +
Sbjct: 285 NVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQ 344
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD+ TYN+L+ LCK+ E+ E++ +M + N TY+ +I L + + E
Sbjct: 345 EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEE 404
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A L +KG+ F+ I GLC R A+EL ++M K P + L+
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLID 464
Query: 425 SSVSK 429
S S+
Sbjct: 465 SLCSR 469
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 185/421 (43%), Gaps = 39/421 (9%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
M + +++A L P + ++ ++NV+Q +++ I
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 61 PHILSSLLHSF-------SIYN---------CEPPPEAYHFVIKTLAENSQFCDISSVLD 104
P+ +++ YN C P Y +IKT +NS+F D VL
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 105 HIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMIND 163
E +E P+ F + LI + A R ++ + F +E M+ +
Sbjct: 477 --EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS--------------FLVE----MVEN 516
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + T +S E + +S + +V+EM++ G V T +I KKEKV
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASAD--KYVKEMRECGVLPNKVLCTGLINEYCKKEKVI 574
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A M GI D YT+++NG+ + AEE+F E+ G+ PDV++Y V I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
NG K N++ + M E G P+VI YN LL C+ E+ + +EL+ EM KG+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N TY +IDG GD+ EA L +E KGL S ++ + G C+ V +A+ +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 404 L 404
Sbjct: 755 F 755
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++ +C DL D V+EM G +V YT +I++ ++ + DA+ +L
Sbjct: 419 TYGTVVKGMCSSGDL--DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK GI PDI CY ++ G+ + +A E++ GL P+ +TY +I+G + +
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 291 NVEAGIKMIACMEELGSKP-----------------------------------DVITYN 315
+ K + M E G P D TY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ L K +++ E+ +EM+ KGI ++ +Y ++I+G + G++ +A + +E + +
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
GL +++ + G C+ G + KA ELL +M+ K + P A +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 20/306 (6%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
I+ LIKT+ RF D++ + ++ + G A +I FC + SLI+
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKE-----QGIAPDI--------FCYN----SLIIG 496
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+R DE F+ EM + G Y I ++ + A + +M+ G+
Sbjct: 497 LSKAKR---MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P+ V T ++N +E ++A + ++ G++ D TY V +NGL K + V+ +
Sbjct: 554 LPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M G PDV +Y L+ K+ + + + EM +G+ N+ Y++++ G
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G+I +A LL+E KGL + + I G C+ G + +A L +M K + P +
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 418 VWEALL 423
V+ L+
Sbjct: 734 VYTTLV 739
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 128/305 (41%), Gaps = 40/305 (13%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ ++V A EI M G D + ++++ + ++ EM + G
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS--SIFDEMVEEGLTP 660
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ Y ++ + ++ A +L++M G+ P+ V Y +++G D +A LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA-----CMEELG------------- 306
DE+ + GLVPD + Y ++G C+ N+VE I + C
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 307 --------------------SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
KP+ +TYN ++ LCK L +EL +M+ ++ +
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +++G G E + +EA+ G+ M+ I + G+ KAL L+ Q
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Query: 407 MADKD 411
M K+
Sbjct: 901 MFAKN 905
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 21/322 (6%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD--LSSDELLGFVQE------ 196
R NR+ ++ M+ D KT +++ + C + L D L +E
Sbjct: 197 LRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL 256
Query: 197 -------MKKLGFCFGMV----DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+K+ C G+V Y +I L K +++ DA +L +M S G+ D Y+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++++G++ + A+ L E++ G+ Y Y+ I + K+ +E + M
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P Y +L++ C+ + + + EL+ EMK + IV++ TY ++ G+ S GD+ A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL-- 423
+++E + G ++ I Q A+ +LK+M ++ ++P + +L+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 424 LSSVSKLDFVNTSFIRLVDQIL 445
LS ++D + + +V+ L
Sbjct: 497 LSKAKRMDEARSFLVEMVENGL 518
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I R+ A +L M + G +D T SL++ + + R+ +D G V EM G
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN--ADAAKGLVHEMVSHGINIK 346
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y I + K+ + A + + M + G+ P Y ++ G +++ + EL
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +V YTY + G+C +++ ++ M G +P+V+ Y TL++ +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++KEMK +GI ++ Y+ +I GL+ + EA L E + GL + +
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I G + A + +K+M + V P
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLP 555
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 116/299 (38%), Gaps = 47/299 (15%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A I + M+ +G + +++L C ++ + ELL EM G V Y
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL---DEMSVKGLHPNAVTYCT 702
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF------- 264
+I K + +A + ++MK G+ PD YT +++G D +A +F
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 265 -----------DELLVLGLV--------------------PDVYTYNVYINGLCKQNNVE 293
+ + G P+ TYN+ I+ LCK+ N+E
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
A ++ M+ P VITY +LL K+ + + E GI + YS++I
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC-----GLCQRGLVRKALELLKQM 407
+ +G +A L+++ K + C G + G + A ++++ M
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 56/244 (22%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G D V + ++ +G I + +A +F + L LVP + V ++ L + N ++
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV--------------------- 334
+ M E DV TY+ L+ A C+ + ++++
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 335 KEMKWKGIV-----------------------------------LNLQTYSIMIDGLASK 359
+ M KG+V L+ TYS++IDGL
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ A GL+ E ++ G+ + M+D IC + + G++ KA L M + P A+ +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 420 EALL 423
+L+
Sbjct: 386 ASLI 389
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 142/262 (54%), Gaps = 2/262 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I ++ A IL M DG C + T ++++ C+ +++S+ + EM + G
Sbjct: 213 KIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSA--AMKVFAEMNRQGVKPN 270
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++I L KV +A + +QM + +KP+I+ + +LNG + +A ELFD
Sbjct: 271 VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFD 330
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+V TYN+ I+ CK N+E + M G PDV TYN L+ LC+
Sbjct: 331 DMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG 390
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L R LV EM K + +L TY+I+ID L +KG++ +A LL+E KGL ++
Sbjct: 391 DLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYN 450
Query: 386 ETICGLCQRGLVRKALELLKQM 407
I G C+ G +R AL L QM
Sbjct: 451 TMIDGYCKEGNLRAALNLRSQM 472
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 131/255 (51%), Gaps = 5/255 (1%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKV---FDALGILNQMKSDGIKPDIVCYTMVLN 249
+++MK G ++ Y +I K K+ + A IL +M++DGI P+ V + ++++
Sbjct: 185 IIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILID 244
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G ++ A ++F E+ G+ P+V TYN INGLC V + M KP
Sbjct: 245 GFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKP 304
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
++IT+N LL CK + + + EL +M +GI N+ TY+I+ID ++ +A L
Sbjct: 305 NIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALY 364
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
L KG+C S ++ I GLC++G + A L+ +M K + + L+ S +K
Sbjct: 365 RIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNK 424
Query: 430 LDFVNTSFIRLVDQI 444
+ +RL+D++
Sbjct: 425 GEM--KKALRLLDEM 437
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 152/322 (47%), Gaps = 30/322 (9%)
Query: 116 EFIFIDLIKTYADAH--RFQDSVNLFYKIPKFRINRVGFAIEIL------------NCMI 161
EF++ ++I+ + F +N K+ K +N+ G IE + N +I
Sbjct: 148 EFVYKEMIRRRIEPTLISFNIVINGLCKVGK--LNKAGDIIEDMKVRGVSANVITYNTLI 205
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
DG+C GK + +D +L +EM+ G C V + +I K +
Sbjct: 206 -DGYCKMGKIGKM----------YKADAIL---KEMRADGICPNEVTFNILIDGFCKDKN 251
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V A+ + +M G+KP++V Y ++NG+ +A L D+++ L P++ T+N
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNA 311
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
+NG CK V+ ++ M + G P+V TYN L+ A CK + L + M KG
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 371
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ ++ TY+ +I GL KGD+ A L+ E K L ++ I LC +G ++KAL
Sbjct: 372 VCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKAL 431
Query: 402 ELLKQMADKDVSPGARVWEALL 423
LL +M K + P + ++
Sbjct: 432 RLLDEMCRKGLKPSQLTYNTMI 453
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M G + T ++++ + C +D + ++ + M G C + Y +
Sbjct: 325 AGELFDDMPKQGITPNVTTYNILIDAYC--KDENMEDAFALYRIMLGKGVCPDVSTYNCL 382
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L +K + A ++++M + +K D++ Y ++++ + + + KA L DE+ GL
Sbjct: 383 IAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL 442
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P TYN I+G CK+ N+ A + + + ME++G +V TYN L++ CK +L
Sbjct: 443 KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANG 502
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKG 360
L+ EM KG++ N TY I+ + + KG
Sbjct: 503 LLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ LVK ++ D + +M I+P ++ + +V+NG+ KA ++ +++ V G
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL---GSKPDVITYNTLLQALCKVRELN 328
+ +V TYN I+G CK + K A ++E+ G P+ +T+N L+ CK + ++
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ EM +G+ N+ TY+ +I+GL + G + EA L ++ +N L + +
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ +V++A EL M + ++P + L+
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILI 348
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 3/191 (1%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+K + +++G++ + E ++ E++ + P + ++N+ INGLCK +
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE---LVKEMKWKGIVLNLQTYSIM 352
+I M+ G +VITYNTL+ CK+ ++ ++ + ++KEM+ GI N T++I+
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDG ++ A + E +G+ ++ I GLC G V +A L QM + +
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302
Query: 413 SPGARVWEALL 423
P ALL
Sbjct: 303 KPNIITHNALL 313
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 144/281 (51%), Gaps = 21/281 (7%)
Query: 163 DGFCVDG--KTCSLILSSVCEQRDLSSDELL------GFVQ--EMKKLG------FCFGM 206
DGFC G + S + RD++ D L GF Q +M + G FC G+
Sbjct: 802 DGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 860
Query: 207 ----VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V +T +I K + DA + N M G P++V YT +++G+ + D A E
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
L E+ +GL P+++TYN +NGLCK N+E +K++ E G D +TY TL+ A C
Sbjct: 921 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K E+++ +E++KEM KG+ + T++++++G G + + LL L KG+ ++
Sbjct: 981 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1040
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F+ + C R ++ A + K M + V P + +E L+
Sbjct: 1041 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 1081
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 154/331 (46%), Gaps = 33/331 (9%)
Query: 94 SQFCDISSVLD-----HIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRIN 148
S FC I +++ H + E F +LI Y A +D+ FR++
Sbjct: 837 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA---------FRVH 887
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMV 207
N MI G + T + ++ +C++ DL S++ELL EM K+G +
Sbjct: 888 ---------NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL---HEMWKIGLQPNIF 935
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +++ L K + +A+ ++ + ++ G+ D V YT +++ + KA+E+ E+
Sbjct: 936 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L GL P + T+NV +NG C +E G K++ M G P+ T+N+L++ C L
Sbjct: 996 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 1055
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ K+M +G+ + +TY ++ G ++ EA L +E KG S +
Sbjct: 1056 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 1115
Query: 388 ICGLCQRGLVRKALELLKQM------ADKDV 412
I G +R +A E+ QM ADK++
Sbjct: 1116 IKGFLKRKKFLEAREVFDQMRREGLAADKEI 1146
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 145/313 (46%), Gaps = 6/313 (1%)
Query: 114 TPEFI-FIDL-IKTYADAHRFQDSVNLFYKI-PKFRINRVGFAIEILNCMINDGFCVDGK 170
T F+ F DL + TY D ++F+++ F + R A + M+N G +
Sbjct: 597 TDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLRE--ARRVFEKMLNYGLVLSVD 654
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+C++ L+ + + ++ ++ F +E ++G C+ + Y VI + + ++ +A +L
Sbjct: 655 SCNVYLTRLSKDCYKTATAIIVF-REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 713
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M+ G PD++ Y+ V+NG + K +L + + GL P+ Y Y I LC+
Sbjct: 714 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + + M G PD + Y TL+ CK ++ + EM + I ++ TY+
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I G GD++EA L E KGL S F E I G C+ G ++ A + M
Sbjct: 834 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 411 DVSPGARVWEALL 423
SP + L+
Sbjct: 894 GCSPNVVTYTTLI 906
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 4/263 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A +L M G+ D + S +++ C +L D++ ++ MK+ G
Sbjct: 701 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL--DKVWKLIEVMKRKGLKPN 758
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y ++I L + K+ +A ++M GI PD V YT +++G + D A + F
Sbjct: 759 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 818
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNN-VEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PDV TY I+G C+ + VEAG K+ M G +PD +T+ L+ CK
Sbjct: 819 EMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKA 877
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ + M G N+ TY+ +IDGL +GD+ A LL E GL +
Sbjct: 878 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 937
Query: 385 DETICGLCQRGLVRKALELLKQM 407
+ + GLC+ G + +A++L+ +
Sbjct: 938 NSIVNGLCKSGNIEEAVKLVGEF 960
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 152/285 (53%), Gaps = 2/285 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + ++ AI++ N MI + D T ++++ C+ + + + F MK+ G
Sbjct: 243 FTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTV-FAMMMKQ-GIKP 300
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y +++ ++V A IL M G+ PDI Y ++++G + +A LF
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 360
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ ++PDV TYN I+GLCK + +K++ M + G PD+ITY+++L ALCK
Sbjct: 361 KEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN 420
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++++ L+ ++K +GI N+ TY+I+IDGL G + +A + E+ L KG + +
Sbjct: 421 HQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTY 480
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
I G C +GL +AL LL +M D P A +E ++ S K
Sbjct: 481 TVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDK 525
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 193/412 (46%), Gaps = 49/412 (11%)
Query: 21 PLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPP 80
P S +H D A + L PT + K IL SL+ S
Sbjct: 43 PYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNK---ILGSLVKS---------- 89
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRE---NFETPEFIFIDLIKTYA------DAHR 131
+ YH V+ +L++ +F I+ VL H + + F LIK A
Sbjct: 90 KHYHTVL-SLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALL 148
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
F D+V F++++VG+ I G C G+T + + DL
Sbjct: 149 FHDNVVAM----GFQLDQVGYGTLI------HGLCKVGETRAAL--------DLLRRVDG 190
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
VQ +V Y+ +I + K + V DA + ++M S GI P++V Y+ +++G
Sbjct: 191 NLVQP--------NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 242
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
A +LF+++++ + PDVYT+N+ ++G CK ++ G + A M + G KP+V
Sbjct: 243 FTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNV 302
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TY +L+ C V+E+N+ + ++ M +G+ ++Q+Y+I+IDG + EA L +E
Sbjct: 303 VTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKE 362
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+K + ++ I GLC+ G + AL+L+ +M D+ V P + ++L
Sbjct: 363 MHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSIL 414
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 30/308 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT---------- 171
LI + + +D+++LF K+ I + IL DGFC DGK
Sbjct: 238 LISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILV----DGFCKDGKMKEGKTVFAMM 293
Query: 172 ------------CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
CSL + C ++++ + + M + G + Y +I K
Sbjct: 294 MKQGIKPNVVTYCSL-MDGYCLVKEVNKAK--SILYTMSQRGVNPDIQSYNILIDGFCKI 350
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+KV +A+ + +M I PD+V Y +++G+ A +L DE+ G+ PD+ TY
Sbjct: 351 KKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITY 410
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ++ LCK + V+ I ++ +++ G +P++ TY L+ LCK L + +++
Sbjct: 411 SSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLV 470
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG + + TY++MI G +KG EA LL + + + ++ I L + K
Sbjct: 471 KGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDK 530
Query: 400 ALELLKQM 407
A E L++M
Sbjct: 531 A-EKLREM 537
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ MI + T ++++ C +L LG EM++ G +V Y +
Sbjct: 198 AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKG--LGCFGEMERNGCLPNVVTYNTL 255
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K ++ +A G+L M S G++P+++ Y +++NG+ + +A E+ +E+ G
Sbjct: 256 IDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGF 315
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TYN +NG CK+ N + + A M G P V+TY L+ ++CK R LNR E
Sbjct: 316 TPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAME 375
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKG-------------------------------- 360
+M+ +G+ N +TY+ +IDG + +G
Sbjct: 376 FFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 435
Query: 361 ---DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ EA G+++E + KGL + I G C++G + +A ++ ++M +K VSP A
Sbjct: 436 VLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAV 495
Query: 418 VWEALL 423
+ +L+
Sbjct: 496 TYSSLI 501
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EIL M GF D T + +L+ C++ + + L EM + G +V YT +
Sbjct: 303 AWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF--HQALVIHAEMVRNGVSPSVVTYTAL 360
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I S+ K + A+ +QM+ G++P+ YT +++G Q +A + +E+ G
Sbjct: 361 INSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 420
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V TYN +I+G C +E + ++ M E G PDV++Y+T++ C+ EL+R +
Sbjct: 421 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 480
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +EM KG+ + TYS +I GL + EAC L +E L+ GL + I C
Sbjct: 481 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 540
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + KAL L +M K P A + L+
Sbjct: 541 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 571
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 2/216 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK--AEELFDELLV 269
+++S + A+ +N KS G P ++ Y VL+ ++ VK AEE++ E++
Sbjct: 148 MVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR 207
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ P+VYTYN+ I G C ++ G+ ME G P+V+TYNTL+ A CK+ ++
Sbjct: 208 SRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDE 267
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L+K M KG+ NL +Y+++I+GL +G + EA +LEE KG ++ +
Sbjct: 268 AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLN 327
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
G C+ G +AL + +M VSP + AL+ S
Sbjct: 328 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINS 363
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A +L M + G + + ++I++ +C R+ S E ++EM GF
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLC--REGSMKEAWEILEEMGYKGFTPD 318
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ K+ AL I +M +G+ P +V YT ++N + + +A E FD
Sbjct: 319 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 378
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + GL P+ TY I+G +Q + +++ M E G P V+TYN + C +
Sbjct: 379 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 438
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +V+EM KG+ ++ +YS +I G KG++ A + +E + KG+ + +
Sbjct: 439 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 498
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ + +A +L ++M D + P + L+
Sbjct: 499 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 536
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 171/367 (46%), Gaps = 22/367 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
LL S S +P +Y+ +I L + +L+ + + F E + L+
Sbjct: 270 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK-GFTPDEVTYNTLLNG 328
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
Y F A+ I M+ +G T + +++S+C+ R+L
Sbjct: 329 YCKEGNFHQ------------------ALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 370
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ + F +M+ G YT +I ++ + +A ILN+M G P +V Y
Sbjct: 371 --NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYN 428
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++G V E +A + E++ GL PDV +Y+ I+G C++ ++ +M M E
Sbjct: 429 AFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 488
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G PD +TY++L+Q LC++R L +L +EM G+ + TY+ +I+ +GD+ +A
Sbjct: 489 GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKA 548
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L +E ++KG + + I GL ++ R+A LL ++ ++ P ++ L+
Sbjct: 549 LHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT-LIE 607
Query: 426 SVSKLDF 432
+ S ++F
Sbjct: 608 NCSNIEF 614
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E + M G + +T + ++ Q L +E + EM + GF +V Y
Sbjct: 373 AMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL--NEAYRILNEMTESGFSPSVVTYNAF 430
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I E++ +ALG++ +M G+ PD+V Y+ +++G + + +A ++ E++ G+
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY+ I GLC+ + + M ++G PD TY TL+ A C +LN+
Sbjct: 491 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 550
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKG-------------------------DIIEACG 367
L EM KG + + TYS++I+GL + +IE C
Sbjct: 551 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 610
Query: 368 LLE----EALNKGLCTQSSM---------------------FDETICGLCQRGLVRKALE 402
+E AL KG C + M ++ I G C+ G + KA
Sbjct: 611 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 670
Query: 403 LLKQMADKDVSP 414
L K+M P
Sbjct: 671 LYKEMIHSGFVP 682
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 52/221 (23%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ M+ G D T S ++ +CE R L+ E QEM +G YT +
Sbjct: 478 AFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT--EACDLSQEMLDMGLPPDEFTYTTL 535
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV---------------IVQEDY 257
I + + + AL + ++M G PD V Y++++NG+ ++ E+
Sbjct: 536 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 595
Query: 258 VKAEELFDELL----------VLGLV-------------------------PDVYTYNVY 282
V ++ +D L+ V+ L+ P YNV
Sbjct: 596 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 655
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
I+G C+ N+ + M G P +T TL++AL K
Sbjct: 656 IHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 696
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 144/281 (51%), Gaps = 21/281 (7%)
Query: 163 DGFCVDG--KTCSLILSSVCEQRDLSSDELL------GFVQ--EMKKLG------FCFGM 206
DGFC G + S + RD++ D L GF Q +M + G FC G+
Sbjct: 359 DGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 207 ----VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V +T +I K + DA + N M G P++V YT +++G+ + D A E
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
L E+ +GL P+++TYN +NGLCK N+E +K++ E G D +TY TL+ A C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K E+++ +E++KEM KG+ + T++++++G G + + LL L KG+ ++
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F+ + C R ++ A + K M + V P + +E L+
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 154/331 (46%), Gaps = 33/331 (9%)
Query: 94 SQFCDISSVLD-----HIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRIN 148
S FC I +++ H + E F +LI Y A +D+ FR++
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA---------FRVH 444
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMV 207
N MI G + T + ++ +C++ DL S++ELL EM K+G +
Sbjct: 445 ---------NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL---HEMWKIGLQPNIF 492
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +++ L K + +A+ ++ + ++ G+ D V YT +++ + KA+E+ E+
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L GL P + T+NV +NG C +E G K++ M G P+ T+N+L++ C L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ K+M +G+ + +TY ++ G ++ EA L +E KG S +
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 388 ICGLCQRGLVRKALELLKQM------ADKDV 412
I G +R +A E+ QM ADK++
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 145/313 (46%), Gaps = 6/313 (1%)
Query: 114 TPEFI-FIDL-IKTYADAHRFQDSVNLFYKI-PKFRINRVGFAIEILNCMINDGFCVDGK 170
T F+ F DL + TY D ++F+++ F + R A + M+N G +
Sbjct: 154 TDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLRE--ARRVFEKMLNYGLVLSVD 211
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+C++ L+ + + ++ ++ F +E ++G C+ + Y VI + + ++ +A +L
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVF-REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M+ G PD++ Y+ V+NG + K +L + + GL P+ Y Y I LC+
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + + M G PD + Y TL+ CK ++ + EM + I ++ TY+
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I G GD++EA L E KGL S F E I G C+ G ++ A + M
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 411 DVSPGARVWEALL 423
SP + L+
Sbjct: 451 GCSPNVVTYTTLI 463
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A +L M G+ D + S +++ C +L D++ ++ MK+ G
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL--DKVWKLIEVMKRKGLKPN 315
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y ++I L + K+ +A ++M GI PD V YT +++G + D A + F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNN-VEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PDV TY I+G C+ + VEAG K+ M G +PD +T+ L+ CK
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ + M G N+ TY+ +IDGL +GD+ A LL E GL +
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + GLC+ G + +A++L+ + ++ + L+
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 139/264 (52%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G DG T + +++ +C +L E + +QEM+ G V YT +I K
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERV--LQEMEDKGLDVDAVTYTVLIDGYCKV 438
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A + N+M + P++V YT + +G+ Q D A EL E+ GL +++TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N INGLCK N+E ++ + M+E G KPDV TY T++ ALC+ +EL+R L++EM
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KGI + TY+++++G G + LLE L K + ++ ++ + C ++
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
E+ K M ++V P + L+
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILI 642
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 140/276 (50%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A+ ++ M+ G +D + ++S C + DL++ + EM+K G V
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR--NWFDEMQKRGLAADGV 391
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I L + ++ +A +L +M+ G+ D V YT++++G +A + +++
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + P+V TY +GLCKQ +V A +++ M G + ++ TYN+L+ LCK L
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + +M G+ ++ TY+ +I L ++ A LL+E L+KG+ ++
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVL 571
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C G V LL+ M +K++ P + +L+
Sbjct: 572 MNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 4/278 (1%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T +++ C +L + + + EM G V YT+VI L + +V DA+
Sbjct: 284 DVVTYGIMVHGYCTLSELET--AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVR 341
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++ M G+ D +T V++G + D A FDE+ GL D TY INGLC
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ ++ +++ ME+ G D +TY L+ CKV ++ + +M K + N+
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ + DGL +GD+ A LL E +KGL ++ I GLC+ G + +A+ + M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 408 ADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ + P + ++ L +LD ++ ++D+
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 149/339 (43%), Gaps = 25/339 (7%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y +I L + + VL +E + + + LI Y + ++ + K+
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDK-GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 143 PKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+ R+ N V + ++DG C G C+ ++ELL EM
Sbjct: 452 VQKRVTPNVVTYTA------LSDGLCKQGDVCA-------------ANELL---HEMCSK 489
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G + Y ++I L K + A+ + M G+KPD+ YT ++ + ++ +A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L E+L G+ P + TYNV +NG C VE G +++ M E P+ TYN+L++
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C + + E+ K M + +V N TY+I+I G ++ EA E + KG
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+S ++ I L ++ +A L ++M + ++ V+
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L DE + QE+ + C Y ++++L ++ DA + ++M S PD+V Y
Sbjct: 236 LPLDEAVQLFQELPEKNTC----SYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTY 288
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++++G + A +L E+ GL + Y I LC + V ++++ M
Sbjct: 289 GIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM 348
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G D + T++ C+ +L R EM+ +G+ + TY+ +I+GL G++ E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A +L+E +KGL + + I G C+ G + +A + +M K V+P + AL
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 3/180 (1%)
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y ++L + A +LFDE+ PDV TY + ++G C + +E IK+++ M
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G + + + Y +++ LC +++ +V++M G+VL+ ++ ++ G KGD+
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A +E +GL + I GLC+ G +++A +L++M DK + A + L+
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 17/271 (6%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L+ M + G ++ T + +++ +C+ +L ++ + + +M + G + YT +
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNL--EQAMRTMIDMDEAGLKPDVYTYTTI 536
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +L + +++ A +L +M GIKP IV Y +++NG + + L + +L +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN + C + N+++ ++ M P+ TYN L++ CK R +
Sbjct: 597 HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALY 656
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD------- 385
EM KG L +Y+ +I L K EA L E+ + L + +++
Sbjct: 657 FHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSF 716
Query: 386 -----ETICGLCQRGLVRKALELLKQMADKD 411
E+ LC LV + L+K +AD D
Sbjct: 717 NEDNLESTLALCDE-LVE--VTLVKSIADTD 744
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 139/264 (52%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G DG T + +++ +C +L E + +QEM+ G V YT +I K
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERV--LQEMEDKGLDVDAVTYTVLIDGYCKV 438
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A + N+M + P++V YT + +G+ Q D A EL E+ GL +++TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N INGLCK N+E ++ + M+E G KPDV TY T++ ALC+ +EL+R L++EM
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KGI + TY+++++G G + LLE L K + ++ ++ + C ++
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
E+ K M ++V P + L+
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILI 642
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 140/276 (50%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A+ ++ M+ G +D + ++S C + DL++ + EM+K G V
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR--NWFDEMQKRGLAADGV 391
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I L + ++ +A +L +M+ G+ D V YT++++G +A + +++
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + P+V TY +GLCKQ +V A +++ M G + ++ TYN+L+ LCK L
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + +M G+ ++ TY+ +I L ++ A LL+E L+KG+ ++
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVL 571
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C G V LL+ M +K++ P + +L+
Sbjct: 572 MNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 4/278 (1%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T +++ C +L + + + EM G V YT+VI L + +V DA+
Sbjct: 284 DVVTYGIMVHGYCTLSELET--AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVR 341
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++ M G+ D +T V++G + D A FDE+ GL D TY INGLC
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ ++ +++ ME+ G D +TY L+ CKV ++ + +M K + N+
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ + DGL +GD+ A LL E +KGL ++ I GLC+ G + +A+ + M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 408 ADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ + P + ++ L +LD ++ ++D+
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 149/339 (43%), Gaps = 25/339 (7%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y +I L + + VL +E + + + LI Y + ++ + K+
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDK-GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 143 PKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+ R+ N V + ++DG C G C+ ++ELL EM
Sbjct: 452 VQKRVTPNVVTYTA------LSDGLCKQGDVCA-------------ANELL---HEMCSK 489
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G + Y ++I L K + A+ + M G+KPD+ YT ++ + ++ +A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L E+L G+ P + TYNV +NG C VE G +++ M E P+ TYN+L++
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C + + E+ K M + +V N TY+I+I G ++ EA E + KG
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+S ++ I L ++ +A L ++M + ++ V+
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L DE + QE+ + C Y ++++L ++ DA + ++M S PD+V Y
Sbjct: 236 LPLDEAVQLFQELPEKNTC----SYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTY 288
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++++G + A +L E+ GL + Y I LC + V ++++ M
Sbjct: 289 GIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM 348
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G D + T++ C+ +L R EM+ +G+ + TY+ +I+GL G++ E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A +L+E +KGL + + I G C+ G + +A + +M K V+P + AL
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 3/180 (1%)
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y ++L + A +LFDE+ PDV TY + ++G C + +E IK+++ M
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G + + + Y +++ LC +++ +V++M G+VL+ ++ ++ G KGD+
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A +E +GL + I GLC+ G +++A +L++M DK + A + L+
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 17/271 (6%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L+ M + G ++ T + +++ +C+ +L ++ + + +M + G + YT +
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNL--EQAMRTMIDMDEAGLKPDVYTYTTI 536
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +L + +++ A +L +M GIKP IV Y +++NG + + L + +L +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN + C + N+++ ++ M P+ TYN L++ CK R +
Sbjct: 597 HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALY 656
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD------- 385
EM KG L +Y+ +I L K EA L E+ + L + +++
Sbjct: 657 FHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSF 716
Query: 386 -----ETICGLCQRGLVRKALELLKQMADKD 411
E+ LC LV + L+K +AD D
Sbjct: 717 NEDNLESTLALCDE-LVE--VTLVKSIADTD 744
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 160/340 (47%), Gaps = 21/340 (6%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+ LL S P +Y+ +I ++S+ + L H E EF + +I
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYL-HKMVNSGVEPNEFTYNTIIN 329
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ A Q+ A +IL + GF D T S +++ +C D
Sbjct: 330 GFCKAGMMQN------------------ADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
++ + F + M+K GF ++ Y +++ L K+ V AL ++ M G PDI Y
Sbjct: 372 MNR-AMAVFYEAMEK-GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTY 429
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+V+NG+ A + ++ + G +PD++T+N I+G CKQ N++ I+++ M
Sbjct: 430 NLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS 489
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PDVITYNTLL LCK R+L+ + + K M KG N+ TY+I+I+ + E
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
A L +E +GL ICGLC G + KA EL
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 179/389 (46%), Gaps = 52/389 (13%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
E Y +I+ L + +F + VL + K + + E ++I +++ Y + Q++VN+F
Sbjct: 41 ETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFE 100
Query: 141 KIPKFRIN-RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL--------- 190
++ + V I+N ++ G+ + + + D+ + +
Sbjct: 101 RMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITG 160
Query: 191 -----LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
L + M G F V Y VI K+ +A + ++M GI PDI+ +
Sbjct: 161 RPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFN 220
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++ + + + ++E+LF +++ G+ P+++T+N++I GLC++ ++ +++ +
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280
Query: 306 GSKPDVI-----------------------------------TYNTLLQALCKVRELNRL 330
G PDVI TYNT++ CK +
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+++++ +KG + + TYS +I+GL + GD+ A + EA+ KG +++ + G
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVW 419
L ++GLV +AL+L+K M + SP +W
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSPD--IW 427
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 191/433 (44%), Gaps = 59/433 (13%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIK 124
++ Y+CEP ++Y+ ++ L E F V ++ ++ P+ + +K
Sbjct: 97 NVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKV--YMRMKDIGIYPDVYTHTIRMK 154
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCV 167
++ R ++ L +P N V + A + + M+ G C
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICP 214
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + ++ +C++ ++ E L F + MK+ G C + + I+ L +K + +A
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKL-FSKVMKR-GVCPNLFTFNIFIQGLCRKGAIDEAAR 272
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-------------------------- 261
+L + S+G+ PD++ Y ++ G V+AE
Sbjct: 273 LLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFC 332
Query: 262 ---------ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
++ + + G +PD +TY+ INGLC ++ + + E G K +I
Sbjct: 333 KAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSII 392
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
YNTL++ L K + + +L+K+M G ++ TY+++++GL G + +A G+L +A
Sbjct: 393 LYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDA 452
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKL 430
+ KG F+ I G C++ + KA+E+L M ++P + LL L KL
Sbjct: 453 IAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKL 512
Query: 431 DFVNTSFIRLVDQ 443
D V +F ++++
Sbjct: 513 DNVVDTFKAMLEK 525
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 127/259 (49%), Gaps = 4/259 (1%)
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
L+ M+N G + T + I++ C+ + ++D++L ++ GF Y+++I
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKIL---RDAMFKGFIPDEFTYSSLING 365
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L + A+ + + G K I+ Y ++ G+ Q ++A +L +++ G PD
Sbjct: 366 LCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPD 425
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
++TYN+ +NGLCK + ++ G PD+ T+NTL+ CK R +++ E++
Sbjct: 426 IWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD 485
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M GI ++ TY+ +++GL + + L KG ++ I C+
Sbjct: 486 TMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDR 545
Query: 396 LVRKALELLKQMADKDVSP 414
V +A+EL K+M + ++P
Sbjct: 546 KVSEAMELFKEMKTRGLTP 564
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 163/362 (45%), Gaps = 9/362 (2%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAEN--SQFCDISSVLDHIEKRENFETPEFIFIDLI 123
+++ F NC+ EAYH + L + + ++ + K+ N + E +F ++
Sbjct: 186 AVISGFYKENCQI--EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
K + F + N+F + R + A +L ++++G D + + ++ C+
Sbjct: 244 KRGVCPNLF--TFNIFIQ-GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHS 300
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
L E ++ +M G Y +I K + +A IL G PD
Sbjct: 301 KLVEAEC--YLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFT 358
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ ++NG+ D +A +F E + G + YN + GL KQ V ++++ M
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G PD+ TYN ++ LCK+ L+ ++ + KG + ++ T++ +IDG + ++
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A +L+ L+ G+ ++ + GLC+ + ++ K M +K +P + L+
Sbjct: 479 KAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538
Query: 424 LS 425
S
Sbjct: 539 ES 540
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 35/250 (14%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++R +K KV +A+ + +M +P + Y ++N ++ + +A +++ +
Sbjct: 79 YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK-------------------- 308
+G+ PDVYT+ + + C A ++++ M G +
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 309 ---------------PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
PD++T+N L+ LCK + +L ++ +G+ NL T++I I
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GL KG I EA LLE +++GL ++ ICG C+ + +A L +M + V
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318
Query: 414 PGARVWEALL 423
P + ++
Sbjct: 319 PNEFTYNTII 328
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 3/260 (1%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
ILN I G D T + ++ C+QR++ D+ + + M G ++ Y ++
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNM--DKAIEILDTMLSHGITPDVITYNTLLNG 505
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K K+ + + M G P+I+ Y +++ +A ELF E+ GL PD
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACME-ELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ T I GLC ++ ++ +E E +N ++ A C+ ++ +L
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLF 625
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M + TY +MID G+I A L E ++KGL + + + LC
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVT 685
Query: 395 GLVRKALELLKQMADKDVSP 414
+ +A+ ++ M + P
Sbjct: 686 HRLSEAVVIINLMVQNGIVP 705
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 7/221 (3%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+E+ M G D T ++ +C +L L FV K+ F +
Sbjct: 546 KVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL-FVTIEKEYKFSYSTAI 604
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +I + +K V A + ++M PD Y ++++ + A E +
Sbjct: 605 FNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENI 664
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GLVP T +N LC + + + +I M + G P+ + N++ +A +E+
Sbjct: 665 SKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV--NSIFEA--DKKEVA 720
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
+ +V E K + +Y ++ DG+ ++ ++EA LL
Sbjct: 721 APK-IVVEYLLKKSHITYYSYELLYDGIRNR-KVVEARPLL 759
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 139/264 (52%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G DG T + +++ +C +L E + +QEM+ G V YT +I K
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERV--LQEMEDKGLDVDAVTYTVLIDGYCKV 438
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A + N+M + P++V YT + +G+ Q D A EL E+ GL +++TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N INGLCK N+E ++ + M+E G KPDV TY T++ ALC+ +EL+R L++EM
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KGI + TY+++++G G + LLE L K + ++ ++ + C ++
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
E+ K M ++V P + L+
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILI 642
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 140/276 (50%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A+ ++ M+ G +D + ++S C + DL++ + EM+K G V
Sbjct: 334 GQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR--NWFDEMQKRGLAADGV 391
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I L + ++ +A +L +M+ G+ D V YT++++G +A + +++
Sbjct: 392 TYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + P+V TY +GLCKQ +V A +++ M G + ++ TYN+L+ LCK L
Sbjct: 452 VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNL 511
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + +M G+ ++ TY+ +I L ++ A LL+E L+KG+ ++
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVL 571
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C G V LL+ M +K++ P + +L+
Sbjct: 572 MNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 4/278 (1%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T +++ C +L + + + EM G V YT+VI L + +V DA+
Sbjct: 284 DVVTYGIMVHGYCTLSELET--AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVR 341
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++ M G+ D +T V++G + D A FDE+ GL D TY INGLC
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ ++ +++ ME+ G D +TY L+ CKV ++ + +M K + N+
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ + DGL +GD+ A LL E +KGL ++ I GLC+ G + +A+ + M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 408 ADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ + P + ++ L +LD ++ ++D+
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 144/327 (44%), Gaps = 25/327 (7%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y +I L + + VL +E + + + LI Y + ++ + K+
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDK-GLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKM 451
Query: 143 PKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+ R+ N V + ++DG C G C+ ++ELL EM
Sbjct: 452 VQKRVTPNVVTYTA------LSDGLCKQGDVCA-------------ANELL---HEMCSK 489
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G + Y ++I L K + A+ + M G+KPD+ YT ++ + ++ +A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L E+L G+ P + TYNV +NG C VE G +++ M E P+ TYN+L++
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C + + E+ K M + +V N TY+I+I G ++ EA E + KG
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 381 SSMFDETICGLCQRGLVRKALELLKQM 407
+S ++ I L ++ +A L ++M
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L DE + QE+ + C Y ++++L ++ DA + ++M S PD+V Y
Sbjct: 236 LPLDEAVQLFQELPEKNTC----SYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTY 288
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++++G + A +L E+ GL + Y I LC + V ++++ M
Sbjct: 289 GIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM 348
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G D + T++ C+ +L R EM+ +G+ + TY+ +I+GL G++ E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A +L+E +KGL + + I G C+ G + +A + +M K V+P + AL
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 3/180 (1%)
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y ++L + A +LFDE+ PDV TY + ++G C + +E IK+++ M
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVHGYCTLSELETAIKLLSEMA 312
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G + + + Y +++ LC +++ +V++M G+VL+ ++ ++ G KGD+
Sbjct: 313 ARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLA 372
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A +E +GL + I GLC+ G +++A +L++M DK + A + L+
Sbjct: 373 AARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 126/271 (46%), Gaps = 17/271 (6%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L+ M + G ++ T + +++ +C+ +L ++ + + +M + G + YT +
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNL--EQAMRTMIDMDEAGLKPDVYTYTTI 536
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +L + +++ A +L +M GIKP IV Y +++NG + + L + +L +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN + C + N+++ ++ M P+ TYN L++ CK R +
Sbjct: 597 HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALY 656
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD------- 385
EM KG L +Y+ +I L K EA L E+ L + +++
Sbjct: 657 FHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSF 716
Query: 386 -----ETICGLCQRGLVRKALELLKQMADKD 411
E+ LC LV + L+K +AD D
Sbjct: 717 NEDNLESTLALCDE-LVE--VTLVKSIADTD 744
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 160/340 (47%), Gaps = 21/340 (6%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+ LL S P +Y+ +I ++S+ + L H E EF + +I
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYL-HKMVNSGVEPNEFTYNTIIN 329
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ A Q+ A +IL + GF D T S +++ +C D
Sbjct: 330 GFCKAGMMQN------------------ADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
++ + F + M+K GF ++ Y +++ L K+ V AL ++ M G PDI Y
Sbjct: 372 MNR-AMAVFYEAMEK-GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTY 429
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+V+NG+ A + ++ + G +PD++T+N I+G CKQ N++ I+++ M
Sbjct: 430 NLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS 489
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PDVITYNTLL LCK R+L+ + + K M KG N+ TY+I+I+ + E
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
A L +E +GL ICGLC G + KA EL
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 179/389 (46%), Gaps = 52/389 (13%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
E Y +I+ L + +F + VL + K + + E ++I +++ Y + Q++VN+F
Sbjct: 41 ETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFE 100
Query: 141 KIPKFRIN-RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL--------- 190
++ + V I+N ++ G+ + + + D+ + +
Sbjct: 101 RMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITG 160
Query: 191 -----LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
L + M G F V Y VI K+ +A + ++M GI PDI+ +
Sbjct: 161 RPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFN 220
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++ + + + ++E+LF +++ G+ P+++T+N++I GLC++ ++ +++ +
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280
Query: 306 GSKPDVI-----------------------------------TYNTLLQALCKVRELNRL 330
G PDVI TYNT++ CK +
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+++++ +KG + + TYS +I+GL + GD+ A + EA+ KG +++ + G
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVW 419
L ++GLV +AL+L+K M + SP +W
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSPD--IW 427
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 191/433 (44%), Gaps = 59/433 (13%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIK 124
++ Y+CEP ++Y+ ++ L E F V ++ ++ P+ + +K
Sbjct: 97 NVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKV--YMRMKDIGIYPDVYTHTIRMK 154
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCV 167
++ R ++ L +P N V + A + + M+ G C
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICP 214
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + ++ +C++ ++ E L F + MK+ G C + + I+ L +K + +A
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKL-FSKVMKR-GVCPNLFTFNIFIQGLCRKGAIDEAAR 272
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-------------------------- 261
+L + S+G+ PD++ Y ++ G V+AE
Sbjct: 273 LLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFC 332
Query: 262 ---------ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
++ + + G +PD +TY+ INGLC ++ + + E G K +I
Sbjct: 333 KAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSII 392
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
YNTL++ L K + + +L+K+M G ++ TY+++++GL G + +A G+L +A
Sbjct: 393 LYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDA 452
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKL 430
+ KG F+ I G C++ + KA+E+L M ++P + LL L KL
Sbjct: 453 IAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKL 512
Query: 431 DFVNTSFIRLVDQ 443
D V +F ++++
Sbjct: 513 DNVVDTFKAMLEK 525
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 127/259 (49%), Gaps = 4/259 (1%)
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
L+ M+N G + T + I++ C+ + ++D++L ++ GF Y+++I
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKIL---RDAMFKGFIPDEFTYSSLING 365
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L + A+ + + G K I+ Y ++ G+ Q ++A +L +++ G PD
Sbjct: 366 LCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPD 425
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
++TYN+ +NGLCK + ++ G PD+ T+NTL+ CK R +++ E++
Sbjct: 426 IWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD 485
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M GI ++ TY+ +++GL + + L KG ++ I C+
Sbjct: 486 TMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDR 545
Query: 396 LVRKALELLKQMADKDVSP 414
V +A+EL K+M + ++P
Sbjct: 546 KVSEAMELFKEMKTRGLTP 564
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 163/362 (45%), Gaps = 9/362 (2%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAEN--SQFCDISSVLDHIEKRENFETPEFIFIDLI 123
+++ F NC+ EAYH + L + + ++ + K+ N + E +F ++
Sbjct: 186 AVISGFYKENCQI--EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
K + F + N+F + R + A +L ++++G D + + ++ C+
Sbjct: 244 KRGVCPNLF--TFNIFIQ-GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHS 300
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
L E ++ +M G Y +I K + +A IL G PD
Sbjct: 301 KLVEAEC--YLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFT 358
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ ++NG+ D +A +F E + G + YN + GL KQ V ++++ M
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G PD+ TYN ++ LCK+ L+ ++ + KG + ++ T++ +IDG + ++
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A +L+ L+ G+ ++ + GLC+ + ++ K M +K +P + L+
Sbjct: 479 KAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538
Query: 424 LS 425
S
Sbjct: 539 ES 540
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 35/250 (14%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++R +K KV +A+ + +M +P + Y ++N ++ + +A +++ +
Sbjct: 79 YIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK 138
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK-------------------- 308
+G+ PDVYT+ + + C A ++++ M G +
Sbjct: 139 DIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQI 198
Query: 309 ---------------PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
PD++T+N L+ LCK + +L ++ +G+ NL T++I I
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GL KG I EA LLE +++GL ++ ICG C+ + +A L +M + V
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318
Query: 414 PGARVWEALL 423
P + ++
Sbjct: 319 PNEFTYNTII 328
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 3/260 (1%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
ILN I G D T + ++ C+QR++ D+ + + M G ++ Y ++
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNM--DKAIEILDTMLSHGITPDVITYNTLLNG 505
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K K+ + + M G P+I+ Y +++ +A ELF E+ GL PD
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACME-ELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ T I GLC ++ ++ +E E +N ++ A C ++ +L
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLF 625
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M + TY +MID G+I A L E ++KGL + + + LC
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVT 685
Query: 395 GLVRKALELLKQMADKDVSP 414
+ +A+ ++ M + P
Sbjct: 686 HRLSEAVVIINLMVQNGIVP 705
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 184/421 (43%), Gaps = 39/421 (9%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
M + +++A L P + ++ ++NV+Q +++ I
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 61 PHILSSLLHSF-------SIYN---------CEPPPEAYHFVIKTLAENSQFCDISSVLD 104
P+ +++ YN C P Y +IKT +NS+F D VL
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 105 HIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMIND 163
E +E P+ F + LI + A R ++ + F +E M+ +
Sbjct: 477 --EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS--------------FLVE----MVEN 516
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + T +S E + +S + +V+EM++ G V T +I KK KV
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASAD--KYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A M GI D YT+++NG+ + AEE+F E+ G+ PDV++Y V I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
NG K N++ + M E G P+VI YN LL C+ E+ + +EL+ EM KG+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N TY +IDG GD+ EA L +E KGL S ++ + G C+ V +A+ +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 404 L 404
Sbjct: 755 F 755
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++ +C DL D V+EM G +V YT +I++ ++ + DA+ +L
Sbjct: 419 TYGTVVKGMCSSGDL--DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK GI PDI CY ++ G+ + +A E++ GL P+ +TY +I+G + +
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 291 NVEAGIKMIACMEELGSKP-----------------------------------DVITYN 315
+ K + M E G P D TY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ L K +++ E+ +EM+ KGI ++ +Y ++I+G + G++ +A + +E + +
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
GL +++ + G C+ G + KA ELL +M+ K + P A +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 20/306 (6%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
I+ LIKT+ RF D++ + ++ + G A +I FC + SLI+
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKE-----QGIAPDI--------FCYN----SLIIG 496
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+R DE F+ EM + G Y I ++ + A + +M+ G+
Sbjct: 497 LSKAKR---MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P+ V T ++N + ++A + ++ G++ D TY V +NGL K + V+ +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M G PDV +Y L+ K+ + + + EM +G+ N+ Y++++ G
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G+I +A LL+E KGL + + I G C+ G + +A L +M K + P +
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 418 VWEALL 423
V+ L+
Sbjct: 734 VYTTLV 739
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 128/305 (41%), Gaps = 40/305 (13%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ ++V A EI M G D + ++++ + ++ EM + G
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS--SIFDEMVEEGLTP 660
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ Y ++ + ++ A +L++M G+ P+ V Y +++G D +A LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA-----CMEELG------------- 306
DE+ + GLVPD + Y ++G C+ N+VE I + C
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 307 --------------------SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
KP+ +TYN ++ LCK L +EL +M+ ++ +
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +++G G E + +EA+ G+ M+ I + G+ KAL L+ Q
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Query: 407 MADKD 411
M K+
Sbjct: 901 MFAKN 905
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 21/322 (6%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD--LSSDELLGFVQE------ 196
R NR+ ++ M+ D KT +++ + C + L D L +E
Sbjct: 197 LRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL 256
Query: 197 -------MKKLGFCFGMV----DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+K+ C G+V Y +I L K +++ DA +L +M S G+ D Y+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++++G++ + A+ L E++ G+ Y Y+ I + K+ +E + M
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P Y +L++ C+ + + + EL+ EMK + IV++ TY ++ G+ S GD+ A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL-- 423
+++E + G ++ I Q A+ +LK+M ++ ++P + +L+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 424 LSSVSKLDFVNTSFIRLVDQIL 445
LS ++D + + +V+ L
Sbjct: 497 LSKAKRMDEARSFLVEMVENGL 518
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I R+ A +L M + G +D T SL++ + + R+ +D G V EM G
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN--ADAAKGLVHEMVSHGINIK 346
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y I + K+ + A + + M + G+ P Y ++ G +++ + EL
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +V YTY + G+C +++ ++ M G +P+V+ Y TL++ +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++KEMK +GI ++ Y+ +I GL+ + EA L E + GL + +
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I G + A + +K+M + V P
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLP 555
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 116/299 (38%), Gaps = 47/299 (15%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A I + M+ +G + +++L C ++ + ELL EM G V Y
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL---DEMSVKGLHPNAVTYCT 702
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF------- 264
+I K + +A + ++MK G+ PD YT +++G D +A +F
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 265 -----------DELLVLGLV--------------------PDVYTYNVYINGLCKQNNVE 293
+ + G P+ TYN+ I+ LCK+ N+E
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
A ++ M+ P VITY +LL K+ + + E GI + YS++I
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC-----GLCQRGLVRKALELLKQM 407
+ +G +A L+++ K + C G + G + A ++++ M
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 97/244 (39%), Gaps = 56/244 (22%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G D V + ++ +G I +E +A +F + L LVP + V ++ L + N ++
Sbjct: 146 GKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV--------------------- 334
+ M E DV TY+ L+ A C+ + ++++
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 335 KEMKWKGIV-----------------------------------LNLQTYSIMIDGLASK 359
+ M KG+V L+ TYS++IDGL
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ A GL+ E ++ G+ + M+D IC + + G++ KA L M + P A+ +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 420 EALL 423
+L+
Sbjct: 386 ASLI 389
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ R+ +L M GF DG T + +++ C+ + + L EM + G
Sbjct: 285 RVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFH--QALVLHSEMLRNGLPPD 342
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT++I ++ K + A+ +QM G++P+ V YT ++NG + +A ++D
Sbjct: 343 VVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWD 402
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G P + TYN +NG C +E I ++ ME G PDV++Y+T++ C+ +
Sbjct: 403 EMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQ 462
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
EL+R ++ EM KG+ + TYS +I GL + + EAC L +E LNK L +
Sbjct: 463 ELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYT 522
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ G + +AL L +M K P + L+
Sbjct: 523 SLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLI 560
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 171/366 (46%), Gaps = 22/366 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S + EP Y+ VI L + + S VL ++ R+ F + L+ Y
Sbjct: 260 LLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD-RKGFAPDGVTYNTLVNGY 318
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
F ++ L + M+ +G D T + +++++C+ +L
Sbjct: 319 CKVGNFHQALVLHSE------------------MLRNGLPPDVVTYTSLINTMCKAGNL- 359
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ + F +M G V YT++I +K + +A I ++M G P IV Y
Sbjct: 360 -NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNA 418
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+LNG V +A L + GL PDV +Y+ I G C+ ++ +M A M E G
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD ITY++L+Q LC+ R LN +L +EM K ++ + TY+ +I+G +GD+ EA
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEAL 538
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
L +E + KG + ++ I GL ++ R+A LL ++ + P ++ L+ S
Sbjct: 539 NLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDT-LIES 597
Query: 427 VSKLDF 432
S ++F
Sbjct: 598 CSDIEF 603
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 112/200 (56%), Gaps = 1/200 (0%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVI-VQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
AL I++ K +G P ++ Y +L+ ++ ++ + AE+++ E++ G+ +V++YN+ I
Sbjct: 151 ALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILI 210
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
G C N+E G++ ME P+V+TYNT++ A CK++ ++ +L++ M +G+
Sbjct: 211 RGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLE 270
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
NL TY+++I+GL G I E G+L E KG ++ + G C+ G +AL L
Sbjct: 271 PNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVL 330
Query: 404 LKQMADKDVSPGARVWEALL 423
+M + P + +L+
Sbjct: 331 HSEMLRNGLPPDVVTYTSLI 350
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++ + C+ + + DE ++ M G ++ Y VI L + ++ + G+L
Sbjct: 240 TYNTVIGAYCKLKRI--DEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLA 297
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M G PD V Y ++NG ++ +A L E+L GL PDV TY IN +CK
Sbjct: 298 EMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAG 357
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N+ ++ M G +P+ +TY +L+ + ++ + EM G + TY+
Sbjct: 358 NLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYN 417
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+++G G + EA GLL KGL + I G C+ + +A ++ +M +K
Sbjct: 418 ALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEK 477
Query: 411 DVSPGARVWEALL 423
VSP A + +L+
Sbjct: 478 GVSPDAITYSSLI 490
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 157/366 (42%), Gaps = 41/366 (11%)
Query: 67 LLHSFSIYNCEPPPE-AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+LHS + N PP Y +I T+ + D + R + LI
Sbjct: 329 VLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR-GLRPNGVTYTSLING 387
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQR 183
++ F D Y+I I R GF I+ N ++N G CV G+
Sbjct: 388 FSQKG-FMDEA---YRIWDEMI-RSGFPPTIVTYNALLN-GHCVSGRM------------ 429
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+E +G ++ M+ G +V Y+ +I + +++ A + +M G+ PD +
Sbjct: 430 ----EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAIT 485
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ ++ G+ Q +A +LF E+L L+PD +TY ING CK+ ++ + + M
Sbjct: 486 YSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMI 545
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID--------- 354
+ G PD +TYN L+ L K + L+ ++ + + N TY +I+
Sbjct: 546 KKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKS 605
Query: 355 ------GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
G KG + EA + E + + ++++ I G C+ G V KA +L K+M
Sbjct: 606 VVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMV 665
Query: 409 DKDVSP 414
D P
Sbjct: 666 DFGFIP 671
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM G + Y +IR + L +M+ + P++V Y V+
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL 251
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +L + + GL P++ TYN+ INGLC+ +E ++A M+ G PD +TY
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTL+ CKV ++ L EM G+ ++ TY+ +I+ + G++ A ++
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+GL + I G Q+G + +A + +M P + ALL
Sbjct: 372 RGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 17/188 (9%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A ++ M+N D T + +++ C++ DL +E L EM K GF V
Sbjct: 498 RLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDL--NEALNLHDEMIKKGFLPDTVT 555
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY---------------TMVLNGVIV 253
Y +I L K+ + +A +L ++ D P+ + Y ++ G +
Sbjct: 556 YNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCM 615
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ +A+++F+ ++ P+ YNV I+G C+ NV K+ M + G P +T
Sbjct: 616 KGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVT 675
Query: 314 YNTLLQAL 321
L++AL
Sbjct: 676 IIALVKAL 683
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 165/343 (48%), Gaps = 21/343 (6%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
YH +I L QF + ++ + K TP +F+D+I+ Y + +++ F++
Sbjct: 135 TYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPG-LFVDIIEIYGEVGMPNEAIKAFHQ 193
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ +F G+ K +++L + E + L + L +++ + G
Sbjct: 194 MLEF------------------GYEPLAKHFNVLLIVLIEHKCL--ETALSLFKKLHEFG 233
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
Y +IR+ +K+ A + N+M G PD+ Y++++ G+ + A
Sbjct: 234 ISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTAL 293
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ DE+L G VPD TYN +N LC++ N+ ++++ M+ +G PDVI YNT++
Sbjct: 294 GVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGF 353
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ +++++M G + N +Y +++GL ++G EA +EE ++ G
Sbjct: 354 CREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHI 413
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
S++ I GLC G V +A E+L M + ++P W LL+
Sbjct: 414 SIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLM 456
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 122/301 (40%), Gaps = 67/301 (22%)
Query: 50 PTKQQQQIPKQPHILSS-LLHSFSIYN------CEPPPEAYHFVIKTLAENSQFCDISSV 102
P + I + H S L H++ ++N C P E Y +++ L SQ V
Sbjct: 236 PNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGV 295
Query: 103 LDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMIN 162
LD E+LN
Sbjct: 296 LD--------------------------------------------------EMLN---- 301
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
G+ D T + +L+S+C + +L E + +MK +G +++Y VI ++ +
Sbjct: 302 KGYVPDALTYNTLLNSLCRKMNLR--EAYRLLSKMKVMGCNPDVINYNTVITGFCREGRA 359
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DA IL M +G P+ + Y ++NG+ + + +A++ +E++ G +P + Y++
Sbjct: 360 LDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLL 419
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK---W 339
I GLC + V +++ M + P T++ LL +C+ + RELV ++ W
Sbjct: 420 ITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQ-TEARELVDKLSEDDW 478
Query: 340 K 340
+
Sbjct: 479 R 479
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 51/118 (43%)
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G K TY+TL+ L + R+ + L+++M+ G + +I+ G EA
Sbjct: 128 GFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMPNEA 187
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ L G + F+ + L + + AL L K++ + +SP R + L+
Sbjct: 188 IKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILI 245
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 184/421 (43%), Gaps = 39/421 (9%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
M + +++A L P + ++ ++NV+Q +++ I
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 61 PHILSSLLHSF-------SIYN---------CEPPPEAYHFVIKTLAENSQFCDISSVLD 104
P+ +++ YN C P Y +IKT +NS+F D VL
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 105 HIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMIND 163
E +E P+ F + LI + A R ++ + F +E M+ +
Sbjct: 477 --EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS--------------FLVE----MVEN 516
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + T +S E + +S + +V+EM++ G V T +I KK KV
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASAD--KYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A M GI D YT+++NG+ + AEE+F E+ G+ PDV++Y V I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
NG K N++ + M E G P+VI YN LL C+ E+ + +EL+ EM KG+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N TY +IDG GD+ EA L +E KGL S ++ + G C+ V +A+ +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 404 L 404
Sbjct: 755 F 755
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++ +C DL D V+EM G +V YT +I++ ++ + DA+ +L
Sbjct: 419 TYGTVVKGMCSSGDL--DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK GI PDI CY ++ G+ + +A E++ GL P+ +TY +I+G + +
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 291 NVEAGIKMIACMEELGSKP-----------------------------------DVITYN 315
+ K + M E G P D TY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ L K +++ E+ +EM+ KGI ++ +Y ++I+G + G++ +A + +E + +
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
GL +++ + G C+ G + KA ELL +M+ K + P A +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 20/306 (6%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
I+ LIKT+ RF D++ + ++ + G A +I FC + SLI+
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKE-----QGIAPDI--------FCYN----SLIIG 496
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+R DE F+ EM + G Y I ++ + A + +M+ G+
Sbjct: 497 LSKAKR---MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P+ V T ++N + ++A + ++ G++ D TY V +NGL K + V+ +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M G PDV +Y L+ K+ + + + EM +G+ N+ Y++++ G
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G+I +A LL+E KGL + + I G C+ G + +A L +M K + P +
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 418 VWEALL 423
V+ L+
Sbjct: 734 VYTTLV 739
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 128/305 (41%), Gaps = 40/305 (13%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ ++V A EI M G D + ++++ + ++ EM + G
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS--SIFDEMVEEGLTP 660
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ Y ++ + ++ A +L++M G+ P+ V Y +++G D +A LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA-----CMEELG------------- 306
DE+ + GLVPD + Y ++G C+ N+VE I + C
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 307 --------------------SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
KP+ +TYN ++ LCK L +EL +M+ ++ +
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +++G G E + +EA+ G+ M+ I + G+ KAL L+ Q
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Query: 407 MADKD 411
M K+
Sbjct: 901 MFAKN 905
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 21/322 (6%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD--LSSDELLGFVQE------ 196
R NR+ ++ M+ D KT +++ + C + L D L +E
Sbjct: 197 LRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL 256
Query: 197 -------MKKLGFCFGMV----DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+K+ C G+V Y +I L K +++ DA +L +M S G+ D Y+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++++G++ + A+ L E++ G+ Y Y+ I + K+ +E + M
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P Y +L++ C+ + + + EL+ EMK + IV++ TY ++ G+ S GD+ A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL-- 423
+++E + G ++ I Q A+ +LK+M ++ ++P + +L+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 424 LSSVSKLDFVNTSFIRLVDQIL 445
LS ++D + + +V+ L
Sbjct: 497 LSKAKRMDEARSFLVEMVENGL 518
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I R+ A +L M + G +D T SL++ + + R+ +D G V EM G
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN--ADAAKGLVHEMVSHGINIK 346
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y I + K+ + A + + M + G+ P Y ++ G +++ + EL
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +V YTY + G+C +++ ++ M G +P+V+ Y TL++ +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++KEMK +GI ++ Y+ +I GL+ + EA L E + GL + +
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I G + A + +K+M + V P
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLP 555
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 116/299 (38%), Gaps = 47/299 (15%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A I + M+ +G + +++L C ++ + ELL EM G V Y
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL---DEMSVKGLHPNAVTYCT 702
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF------- 264
+I K + +A + ++MK G+ PD YT +++G D +A +F
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 265 -----------DELLVLGLV--------------------PDVYTYNVYINGLCKQNNVE 293
+ + G P+ TYN+ I+ LCK+ N+E
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
A ++ M+ P VITY +LL K+ + + E GI + YS++I
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC-----GLCQRGLVRKALELLKQM 407
+ +G +A L+++ K + C G + G + A ++++ M
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 56/244 (22%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G D V + ++ +G I + +A +F + L LVP + V ++ L + N ++
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV--------------------- 334
+ M E DV TY+ L+ A C+ + ++++
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 335 KEMKWKGIV-----------------------------------LNLQTYSIMIDGLASK 359
+ M KG+V L+ TYS++IDGL
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ A GL+ E ++ G+ + M+D IC + + G++ KA L M + P A+ +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 420 EALL 423
+L+
Sbjct: 386 ASLI 389
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 145/277 (52%), Gaps = 2/277 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI++ N MI + D T ++++++ C+ + + + M K G V Y ++
Sbjct: 279 AIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV--FDMMMKQGIKPNFVTYNSL 336
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ ++V A I N M G+ PDI Y++++NG + + +A LF E+ +
Sbjct: 337 MDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDV TY+ I+GL K + ++++ M + G P + TYN++L ALCK+ ++++
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIA 456
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ ++K KGI N+ TYSI+I GL G + +A + E L KG + I G C
Sbjct: 457 LLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFC 516
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
GL +AL LL +M D P A+ +E ++LS K
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 122/218 (55%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I S+ K + V +A + ++M S GI PD+V Y+ +++G + A +LF+
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFN 284
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++++ + PDVYT+N+ +N CK ++ G + M + G KP+ +TYN+L+ C V+
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+N+ + + M G+ ++Q+YSIMI+G EA L +E K + +
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GL + G + AL+L+ QM D+ V P R + ++L
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSIL 442
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 96/218 (44%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y++ + V DA+ + N++ P + +L ++ + Y L
Sbjct: 50 FISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQ 109
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P++ N+ IN C+ + + A + ++G PD IT+ TL++ LC
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKG 169
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + ++ G + +Y +I GL G+ A LL+ + M++
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I +C+ LV +A +L +M K +SP + AL+
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALI 267
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
K + + Y+ D A LF+ LL P + +N + L K + +
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ ME G KP+++ N L+ C++ + + ++ G V + T++ +I GL
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
KG I +A ++ + G + I GLC+ G R AL+LL+++ V P
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226
Query: 418 VWEALLLSSVSKLDFVNTSF 437
++ ++ S+ K+ VN +F
Sbjct: 227 MYNT-IIDSMCKVKLVNEAF 245
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 158/299 (52%), Gaps = 20/299 (6%)
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
+ +D+V+LF K+ IN + IL DGFC +G+ V E +++ +
Sbjct: 157 KLKDAVDLFNKMILENINPDVYTFTILV----DGFCKEGR--------VKEAKNVLA--- 201
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ +Q +K G+V Y +++ ++V A I N M G+ PDI Y++++NG
Sbjct: 202 MMMIQGIKP-----GVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILING 256
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ +A EL E+ ++P+V TY+ I+GLCK + +K++ M + G P+
Sbjct: 257 FCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPN 316
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
++TY+++L ALCK +++ L+ +MK +GI N+ TY+I+I GL G + +A + E
Sbjct: 317 IVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFE 376
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ L KG + I G C +GL +AL LL +M D P A+ +E ++LS K
Sbjct: 377 DLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKK 435
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + +V A I N M G D ++ S++++ C+ + + DE + ++EM
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMM--DEAMELLKEMHHKQIIP 280
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y+++I L K K+ AL ++++M G P+IV Y+ +L+ + A L
Sbjct: 281 NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G+ P++YTY + I GLC+ +E K+ + G +V TY ++Q C
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDK 400
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ L+ +M+ G + N +TY I+I L K + A LL E + + ++
Sbjct: 401 GLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALT 460
Query: 385 DETICGLCQRG 395
++ I + G
Sbjct: 461 NDLIASIWVTG 471
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 125/288 (43%), Gaps = 51/288 (17%)
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
F + Y + + V DA+ + N++ P + + +L ++ + Y L
Sbjct: 25 FNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYL 84
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++ G+ P++ N+ IN C+ ++ + ++ + ++G KP+ IT NTL++ LC
Sbjct: 85 SQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCL 144
Query: 324 ----------VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE--- 370
V +L +L +M + I ++ T++I++DG +G + EA +L
Sbjct: 145 NGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMM 204
Query: 371 -EALNKGLCTQSSMFDE-------------------------------TICGLCQRGLVR 398
+ + G+ T +S+ D I G C+ ++
Sbjct: 205 IQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMD 264
Query: 399 KALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQI 444
+A+ELLK+M K + P + +L+ L K+ + ++LVD++
Sbjct: 265 EAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYA----LKLVDEM 308
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 154/318 (48%), Gaps = 23/318 (7%)
Query: 91 AENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRV 150
NS+ + + L H + E +F + +I Y+ + QD+ + K KF+
Sbjct: 269 GANSKVVEAENYL-HKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRIL-KDAKFK---- 322
Query: 151 GFAIEILNCMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
GF D T CSLI+ VC+ D+ D L +E G +V Y
Sbjct: 323 -------------GFVPDEFTYCSLIIG-VCQDGDI--DHALALFEEALGKGLKPSIVLY 366
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I+ L ++ V AL ++N M +G+ PDI Y +V+NG+ A L + +
Sbjct: 367 NTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIA 426
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G +PD++T+N I+G CK+ ++ I ++ M G PDVITYN++L LCK +
Sbjct: 427 KGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPED 486
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ E K + KG + N+ TY+I+I+ L + EA LLEE N+GL F I
Sbjct: 487 VMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVIS 546
Query: 390 GLCQRGLVRKALELLKQM 407
G C G + +A +L ++M
Sbjct: 547 GFCNNGDLDEAYQLFRRM 564
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 184/401 (45%), Gaps = 71/401 (17%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETP--EFIFIDLIKTYADAHRFQDSVNLF 139
Y +I+ L + +F + VL +E R N + E +++ ++ Y + Q++V++F
Sbjct: 42 TYKRMIEKLGFHGEFDAMERVL--MEMRLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVF 99
Query: 140 YKIPKFRINRVGFAIE-ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
++ + F+ I+N ++ G+ L MK
Sbjct: 100 ERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYL---------------------RMK 138
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
G + +T I+S + ++ AL +LN M S G + + V Y V++G + V
Sbjct: 139 HEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQV 198
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A ELF+++L LG+ P + T+N ++ LCK+ +++ G K++ + + G P++ T+N +
Sbjct: 199 EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFI 258
Query: 319 QALC------------------------------------------KVRELNRLRELVKE 336
Q LC KV ++ ++K+
Sbjct: 259 QGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD 318
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
K+KG V + TY +I G+ GDI A L EEAL KGL +++ I GL Q+GL
Sbjct: 319 AKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGL 378
Query: 397 VRKALELLKQMADKDVSPGARVWEA-LLLSSVSKLDFVNTS 436
V KAL+L+ M+ + +SP +W L+++ + K+ V+ +
Sbjct: 379 VLKALQLMNDMSKEGMSP--DIWTYNLVINGLCKMGCVSDA 417
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 166/374 (44%), Gaps = 27/374 (7%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
YNCEP +Y+ ++ L E F V + K E F IK++ R
Sbjct: 105 YNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM-KHEGIAPDVCTFTIRIKSFCRTKRPL 163
Query: 134 DSVNLFYKIPK--FRINRV-------GF--------AIEILNCMINDGFCVDGKTCSLIL 176
++ L +P +N V GF A E+ N M+ G T + ++
Sbjct: 164 AALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLM 223
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK-------EKVFDALGIL 229
+C++ L E L + ++ K G C + + I+ L +K KV +A L
Sbjct: 224 HILCKKGHLQEGEKL--LNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYL 281
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
++M + G++PD Y ++ G A + + G VPD +TY I G+C+
Sbjct: 282 HKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQD 341
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+++ + + G KP ++ YNTL++ L + + + +L+ +M +G+ ++ TY
Sbjct: 342 GDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTY 401
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+++I+GL G + +A LL A+ KG F+ I G C+R + A+ +L M
Sbjct: 402 NLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWS 461
Query: 410 KDVSPGARVWEALL 423
V+P + ++L
Sbjct: 462 HGVTPDVITYNSIL 475
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 124/253 (49%), Gaps = 3/253 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++++N M +G D T +L+++ +C+ +S L + G+ + + +
Sbjct: 382 ALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNL--LNAAIAKGYLPDIFTFNTL 439
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ K+ +A+GIL+ M S G+ PD++ Y +LNG+ E F ++ G
Sbjct: 440 IDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGC 499
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P++ TYN+ I LCK V + ++ + G PD +++ T++ C +L+ +
Sbjct: 500 LPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQ 559
Query: 333 LVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L + M+ + I + TY+IMI+ + K D+ A L E +KG S + I G
Sbjct: 560 LFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGF 619
Query: 392 CQRGLVRKALELL 404
C+ G V + L
Sbjct: 620 CKVGNVNSGYDFL 632
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 7/297 (2%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD-----ELLGFVQEMKKLGFCFGMVDY 209
++LN ++ +G C + T ++ + +C + L E ++ +M G Y
Sbjct: 237 KLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTY 296
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I K K+ DA IL K G PD Y ++ GV D A LF+E L
Sbjct: 297 NTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALG 356
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
GL P + YN I GL +Q V ++++ M + G PD+ TYN ++ LCK+ ++
Sbjct: 357 KGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSD 416
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L+ KG + ++ T++ +IDG + + A G+L+ + G+ ++ +
Sbjct: 417 ANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILN 476
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
GLC+ +E K + +K P + +L+ S+ K V T + L+++I N
Sbjct: 477 GLCKAAKPEDVMETFKMIMEKGCLPNIITYN-ILIESLCKARKV-TEALDLLEEIRN 531
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 38/227 (16%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI IL+ M + G D T + IL+ +C+ D + F M+K G ++ Y +
Sbjct: 452 AIGILDSMWSHGVTPDVITYNSILNGLCKAAK-PEDVMETFKMIMEK-GCLPNIITYNIL 509
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPD-------------------------------- 240
I SL K KV +AL +L ++++ G+ PD
Sbjct: 510 IESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYR 569
Query: 241 ----IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ Y +++N + D A++LF E+ G PD YTY V I+G CK NV +G
Sbjct: 570 ICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGY 629
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ E+G P + T+ ++ LC ++ +V M G+V
Sbjct: 630 DFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVV 676
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 142/288 (49%), Gaps = 37/288 (12%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ C +L LG EM++ G +V Y +I + K ++ +A G+L
Sbjct: 12 TYNILIRGFCSVGELQKG--LGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLK 69
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M S G++P+++ Y +++NG+ + +A E+ +E+ G PD TYN +NG CK+
Sbjct: 70 SMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG 129
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N + + A M G P V+TY L+ ++CK R LNR E +M+ +G+ N +TY+
Sbjct: 130 NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT 189
Query: 351 IMIDGLASKG-----------------------------------DIIEACGLLEEALNK 375
+IDG + +G + EA G+++E + K
Sbjct: 190 TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 249
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + I G C++G + +A ++ ++M +K VSP A + +L+
Sbjct: 250 GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EIL M GF D T + +L+ C++ + + L EM + G +V YT +
Sbjct: 99 AWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH--QALVIHAEMVRNGVSPSVVTYTAL 156
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I S+ K + A+ +QM+ G++P+ YT +++G Q +A + +E+ G
Sbjct: 157 INSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 216
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V TYN +I+G C +E + ++ M E G PDV++Y+T++ C+ EL+R +
Sbjct: 217 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 276
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +EM KG+ + TYS +I GL + EAC L +E L+ GL + I C
Sbjct: 277 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 336
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + KAL L +M K P A + L+
Sbjct: 337 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 171/367 (46%), Gaps = 22/367 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
LL S S +P +Y+ +I L + +L+ + + F E + L+
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK-GFTPDEVTYNTLLNG 124
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
Y F A+ I M+ +G T + +++S+C+ R+L
Sbjct: 125 YCKEGNFHQ------------------ALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 166
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ + F +M+ G YT +I ++ + +A ILN+M G P +V Y
Sbjct: 167 --NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYN 224
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++G V E +A + E++ GL PDV +Y+ I+G C++ ++ +M M E
Sbjct: 225 AFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 284
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G PD +TY++L+Q LC++R L +L +EM G+ + TY+ +I+ +GD+ +A
Sbjct: 285 GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKA 344
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L +E ++KG + + I GL ++ R+A LL ++ ++ P ++ L+
Sbjct: 345 LHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT-LIE 403
Query: 426 SVSKLDF 432
+ S ++F
Sbjct: 404 NCSNIEF 410
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A +L M + G + + ++I++ +C R+ S E ++EM GF
Sbjct: 57 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLC--REGSMKEAWEILEEMGYKGFTPD 114
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ K+ AL I +M +G+ P +V YT ++N + + +A E FD
Sbjct: 115 EVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFD 174
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + GL P+ TY I+G +Q + +++ M E G P V+TYN + C +
Sbjct: 175 QMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLE 234
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +V+EM KG+ ++ +YS +I G KG++ A + +E + KG+ + +
Sbjct: 235 RMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYS 294
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ + +A +L ++M D + P + L+
Sbjct: 295 SLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 332
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P+VYTYN+ I G C ++ G+ ME G P+V+TYNTL+ A CK+ ++ L
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+K M KG+ NL +Y+++I+GL +G + EA +LEE KG ++ + G C+
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLS 425
G +AL + +M VSP + AL+ S
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINS 159
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 104/208 (50%), Gaps = 2/208 (0%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P++ Y +++ G + K F E+ G +P+V TYN I+ CK ++
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M G +P++I+YN ++ LC+ + E+++EM +KG + TY+ +++G
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+G+ +A + E + G+ + I +C+ + +A+E QM + + P
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 417 RVWEALLLSSVSKLDFVNTSFIRLVDQI 444
R + L+ S+ +N ++ R+++++
Sbjct: 186 RTY-TTLIDGFSRQGLLNEAY-RILNEM 211
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 116/289 (40%), Gaps = 62/289 (21%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ A+ ++ M+ G D + S I+S C + +L D QEM + G
Sbjct: 233 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL--DRAFQMKQEMVEKGVSPDA 290
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+++I+ L + ++ +A + +M G+ PD YT ++N V+ D KA L DE
Sbjct: 291 VTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE 350
Query: 267 LLVLGLVPDVYTYNVYINGLCKQ--------------------------------NNVE- 293
++ G +PD TY+V INGL KQ +N+E
Sbjct: 351 MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEF 410
Query: 294 ------------AGI-----KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
G+ ++ M E KP YN ++ C+ L + L KE
Sbjct: 411 KSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKE 470
Query: 337 MKWKGIVLNLQTYSIMIDGLASK----------GDIIEACGLLEEALNK 375
M G V + T +I L + GD + +C L E L K
Sbjct: 471 MIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAK 519
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 128/224 (57%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+ +I + K + V DA + ++M S GI P++V Y+ +++G A +LF+
Sbjct: 227 VVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFN 286
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ + PDVYT+N+ ++ CK + +K++ M + G P+++TY+++L ALCK
Sbjct: 287 KMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTH 346
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ L+ ++K +GI N+ TY+I+IDGL + G + +A + E+ L KG +
Sbjct: 347 RVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYI 406
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G C++GL +A LL +M + P A+ +E + LS K
Sbjct: 407 VMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKK 450
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + ++ A+++ N MI++ D T ++++ C+ +S L V EM G
Sbjct: 273 FTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKIS--YALKLVDEMHDRGQPP 330
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y++++ +L K +V A+ +L ++K GI+P++ YT++++G+ A +F
Sbjct: 331 NIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIF 390
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++LLV G V TY V G CK+ + +++ MEE G PD TY + +L K
Sbjct: 391 EDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKK 450
Query: 325 RELNRLRELVKE 336
E + +L +E
Sbjct: 451 GENDMAEKLHRE 462
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y++ + V DA+ + N + P + + +L ++ + Y L
Sbjct: 52 LIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSK 111
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P++ N+ IN C+ + + A + ++G P+ IT+ TL++ LC
Sbjct: 112 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKG 171
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++++ ++ G N +Y +IDGL G+ A LL K + M+
Sbjct: 172 QIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYS 231
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G+C+ V A +L +M K +SP + AL+
Sbjct: 232 TIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 269
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 115/301 (38%), Gaps = 66/301 (21%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFC---------- 166
F LIK + ++N K+ F+ N++ + I DG C
Sbjct: 160 FTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLI------DGLCKVGETRAALD 213
Query: 167 ----VDGKTC-------SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
VDGK S I+ +C+ + + ++ EM G +V Y+ +I
Sbjct: 214 LLRRVDGKLVQPNVVMYSTIIDGMCKDKHV--NDAFDLYSEMVSKGISPNVVTYSALISG 271
Query: 216 LVKKEKVFDALGILNQMKSDGIKPD----------------------------------- 240
K+ DA+ + N+M S+ IKPD
Sbjct: 272 FFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPN 331
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
IV Y+ +L+ + KA L +L G+ P+++TY + I+GLC +E +
Sbjct: 332 IVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFE 391
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ G V+TY + CK + L+ +M+ G + + +TY ++ L KG
Sbjct: 392 DLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKG 451
Query: 361 D 361
+
Sbjct: 452 E 452
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
K +++ Y+ D A LF+ LL P +N + L K + +
Sbjct: 49 KINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLY 108
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ ME G KP+++ N L+ C++ + + ++ G N T++ +I GL
Sbjct: 109 LSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLC 168
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
KG I +A ++ + G + I GLC+ G R AL+LL+++ K V P
Sbjct: 169 LKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVV 228
Query: 418 VWEALLLSSVSKLDFVNTSF 437
++ ++ + K VN +F
Sbjct: 229 MYST-IIDGMCKDKHVNDAF 247
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 127/229 (55%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M K G V Y++++ +V +A GI + M G+ ++ Y +++NG +
Sbjct: 161 MMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKM 220
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A LF+E+ L+PDV TYN INGLCK + +K++ M + G PD+ITY++
Sbjct: 221 TDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSS 280
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL ALCK ++++ L+K +K +GI N+ TY+I+IDGL G + +A + E+ L KG
Sbjct: 281 LLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 340
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + I G C +GL +AL LL +M D P A +E ++ S
Sbjct: 341 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRS 389
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 119/255 (46%), Gaps = 2/255 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +L M+ G + T S ++ C ++++ + G M G + Y +
Sbjct: 154 AKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAK--GIFSTMSLRGVTANVWSYNIM 211
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K + +A+ + +M + PD+V Y ++NG+ A +L DE+ G
Sbjct: 212 INGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQ 271
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ TY+ ++ LCK + V+ I ++ +++ G +P++ TY L+ LCK L
Sbjct: 272 PPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 331
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +++ KG + + TY++MI G +KG EA LL + + + ++ I L
Sbjct: 332 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLF 391
Query: 393 QRGLVRKALELLKQM 407
KA LL++M
Sbjct: 392 DNDENDKAENLLREM 406
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+N V A I + M G + + +++++ C+ + +DE + +EM +
Sbjct: 183 VNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIK--MTDEAMNLFEEMHCRKLIPDV 240
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K K+ AL ++++M G PDI+ Y+ +L+ + KA L
Sbjct: 241 VTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKN 300
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L G+ P++YTY + I+GLCK +E + + G V TY ++ C
Sbjct: 301 LKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGL 360
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ L+ +MK N TY I+I L + +A LL E + +GL
Sbjct: 361 FDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITRGL 411
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + +++ +C+ +S L V EM G ++ Y++++ +L K +V A+ +L
Sbjct: 242 TYNSLINGLCKSGKISY--ALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLK 299
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+K GI+P++ YT++++G+ A +F++LLV G V TY V I+G C +
Sbjct: 300 NLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKG 359
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ + +++ M++ P+ +TY ++++L E ++ L++EM +G++
Sbjct: 360 LFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITRGLL 412
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A+ + ++ G+ P+ TY+ ++G C N V + + M G +V +YN ++
Sbjct: 153 EAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMI 212
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG-- 376
CK++ + L +EM + ++ ++ TY+ +I+GL G I A L++E ++G
Sbjct: 213 NGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQP 272
Query: 377 --LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ T SS+ D LC+ V KA+ LLK + D+ + P + L+
Sbjct: 273 PDIITYSSLLD----ALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILI 317
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ NV+ ++A M + G P+ +TY++L+ C V E+N + + M +G+ N+
Sbjct: 147 NEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVW 206
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+Y+IMI+G EA L EE + L ++ I GLC+ G + AL+L+ +M
Sbjct: 207 SYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEM 266
Query: 408 ADKDVSPGARVWEALL 423
D+ P + +LL
Sbjct: 267 HDRGQPPDIITYSSLL 282
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 169/341 (49%), Gaps = 24/341 (7%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
E + +I L +QF +L+ + K+E E IF+ + + Y HR D++ +F+
Sbjct: 51 ETFGLIISRLVTVNQFRPAEGMLERM-KQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFH 109
Query: 141 KIPKFRINRVGFA-IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
K+ F++ A + IL+ ++ + +GF +EM++
Sbjct: 110 KMEGFQLRPTQKAYLTILDILVEENHV---------------------KRAIGFYREMRE 148
Query: 200 LGFCFGMVDYTNVIRSLVK-KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
LG +V +I++L K KE V AL I +M + G +PD Y ++NG+ +
Sbjct: 149 LGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNIS 208
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A+ELF E+ G V TY I+GLC+ NN++ I ++ M+ +P+V TY++L+
Sbjct: 209 EAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLM 268
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCK ++ +L++ M K + N+ TYS +I+GL + + EA +L+ +GL
Sbjct: 269 DGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLK 328
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ ++ + I GLC G ++A + +M +SP W
Sbjct: 329 PNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASW 369
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 201/446 (45%), Gaps = 37/446 (8%)
Query: 17 HRKWPLSPYKAK-W-HQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ----PHILSSLLH- 69
H P P A W L AK L +P T+QQQQ P++ LS+L+H
Sbjct: 25 HPHHPRQPTAAGGWLPPRLRSSGAKPPPTPRLESPTTRQQQQAPRRLLGSDRRLSALVHR 84
Query: 70 -----SFSIYNCEP-PPEAY--HFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
+ + P PP+A + +++ L + D V+ +
Sbjct: 85 GDLDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVGACGPAATV----VAYGA 140
Query: 122 LIKTYADAHRFQDSVNLFYKIP----KFRIN----------RVGFAIEILNCMINDGFCV 167
L Y A R D+ + +P + N +V A+ +L+ M+ G
Sbjct: 141 LTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAP 200
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T +++L + C+ R + + + M+ G V Y ++ + + V DAL
Sbjct: 201 DVVTYNILLEATCKGRGYR--QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALE 258
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L + S G KP V Y VL G+ E + A+EL E+L P+ T+NV I LC
Sbjct: 259 LLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLC 318
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
++ ++ I+++ M + G +++TYN ++ LC+ R ++ L+ +MK G ++
Sbjct: 319 RKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIV 378
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ ++ GL S ++A L++ G + F+ I LCQ+GL+ A+E+ KQM
Sbjct: 379 TYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM 438
Query: 408 ADKDVSPGARVWEALL--LSSVSKLD 431
DK +P + + ++ L+ +KLD
Sbjct: 439 PDKGCTPNSITYSTIISGLAKATKLD 464
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 117/241 (48%), Gaps = 2/241 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I +L ++ +V DAL +L+ M G PD+V Y ++L Y +A EL D +
Sbjct: 170 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 229
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P+ TYNV ++G+C + +V+ ++++ + G KP + YNT+L+ LC
Sbjct: 230 AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 289
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
ELV EM + N T++++I L KG + +A LLE+ G ++ I
Sbjct: 290 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 349
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTP 448
GLC++ V A+ LL +M P + LL S +V+ L+D +
Sbjct: 350 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAE--ELMDNMTQNG 407
Query: 449 C 449
C
Sbjct: 408 C 408
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 159/359 (44%), Gaps = 23/359 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + + C+P Y+ V+K L ++ D ++ + REN E F +I +
Sbjct: 259 LLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM-LRENCPPNEATFNVVIYSL 317
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
Q ++ L K+ K G I+ T + I++ +CEQR++
Sbjct: 318 CRKGLLQQAIQLLEKMSKH-----GCTANIV-------------TYNAIINGLCEQRNV- 358
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D +G + +MK G +V Y +++ L + DA +++ M +G PD V +
Sbjct: 359 -DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNT 417
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ + + V A E+F ++ G P+ TY+ I+GL K ++ +++ M G
Sbjct: 418 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 477
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD I Y L + L + + V++++ GI + Y+ ++ GL G A
Sbjct: 478 FNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 536
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV-WEALLL 424
++ ++ G + I GL G + +A ELL ++ +DV + + EALLL
Sbjct: 537 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEALLL 595
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 125/235 (53%), Gaps = 2/235 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S I+ S+C +D + EM++ G + Y ++I + DA +L +M
Sbjct: 259 SAIIDSLC--KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I PD+V Y ++N + + + +AEEL+DE+L G++P+ TY+ I+G CKQN +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+A M M G P++IT+NTL+ C + ++ EL+ EM G+V + TY+ +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I G GD+ A LL+E ++ GLC D + GLC G ++ ALE+ K M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 44/312 (14%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIE 155
+P I F LI Y A R D + L +++ + + + + A++
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L MI+ G C D TC +L +C+ L D + +
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLK---------------------DALEMFKV 490
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ K +K DA N G++PD+ Y ++++G+I + +++AEEL++E+ G+VPD
Sbjct: 491 MQKSKKDLDASHPFN-----GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TY+ I+GLCKQ+ ++ +M M P+V+T+ TL+ CK ++ EL
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM +GIV N TY +I G G+I A + +E ++ G+ + + GL +
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Query: 396 LVRKALELLKQM 407
+++A+ +L+++
Sbjct: 666 ELKRAVAMLEKL 677
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 166/370 (44%), Gaps = 33/370 (8%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I +L ++ + D ++ ++++ F P+ F + +I + + R+ D+ L +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIF--PDLFTYNSMIVGFCSSGRWSDAEQLLQE 315
Query: 142 IPKFRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + +I+ + A E+ + M+ G + T S ++ C+Q
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L + E + ++ K G ++ + +I +++ D + +L++M G+ D Y
Sbjct: 376 LDAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++G + D A +L E++ GL PD+ T + ++GLC ++ ++M M++
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Query: 305 L-----------GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G +PDV TYN L+ L + EL +EM +GIV + TYS MI
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DGL + + EA + + +K F I G C+ G V LEL +M + +
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 414 PGARVWEALL 423
A + L+
Sbjct: 614 ANAITYITLI 623
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 9/262 (3%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ Q+M++ + + +I+ K+ AL ++ G+ PD+V +T +
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ V++ +A + F ++ P+V T+ +NGLC++ + + ++ M E G
Sbjct: 156 LHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 308 KPDVITYNTLLQALCK----VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+P ITY T++ +CK V LN LR++ +E+ I+ N+ YS +ID L G
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKM-EEVSH--IIPNVVIYSAIIDSLCKDGRHS 272
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A L E KG+ ++ I G C G A +LL++M ++ +SP + AL+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 424 LSSVSKLDFVNTSFIRLVDQIL 445
+ V + F L D++L
Sbjct: 333 NAFVKEGKFFEAE--ELYDEML 352
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 13/293 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A + M G + T + ++ C + + D+ + + EM + G
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI--DDGMELLHEMTETGLVADTT 431
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + AL +L +M S G+ PDIV +L+G+ A E+F +
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
G+ PDV TYN+ I+GL + ++ M G PD ITY++
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M K N+ T++ +I+G G + + L E +G
Sbjct: 552 MIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + + ICG + G + AL++ ++M V P +L SK
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 36/202 (17%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +LF ++L +P V + + + + + I + ME + D+ ++N L++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 320 ALCKVREL--------------------------------NRLRE---LVKEMKWKGIVL 344
C +L +R+ E +M
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ T++ +++GL +G I+EA LL+ + GL + + G+C++G AL LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 405 KQMAD-KDVSPGARVWEALLLS 425
++M + + P ++ A++ S
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDS 264
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 127/236 (53%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +++EMK LG V YT VI + + +AL + ++M G PD+V Y +
Sbjct: 314 DHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL 373
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG+ Q + AE+L +E+ G+ PD+ T+ I+G C+Q N E +++ +
Sbjct: 374 LNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRL 433
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDV+TYN+L+ +C+ +L + EL +M + I+ N TYSI+ID KG + +A G
Sbjct: 434 RPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFG 493
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+E + KG ++ I G C+ G V+K + L++M +V P + L+
Sbjct: 494 FLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLI 549
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
+FR V AI +++ M N G T + +L +C+ R D+ + M +
Sbjct: 202 RFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRF--DKAKEVFRTMDQCSVA 259
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ + +I + +V +A+ +M+ + PD+V ++ ++ + + A
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E+ LGLVPD Y + I G C+ ++ +++ M G PDV+TYNTLL LCK
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCK 379
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
L +L+ EM+ +G+ +L T++ +I G +G+ A L + L + L
Sbjct: 380 QHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVT 439
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++ I G+C++G + KA EL M +++ P + L+ S K
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEK 485
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 179/386 (46%), Gaps = 33/386 (8%)
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
I+SSLL S + P P+ + +I+T ++ + RE FE +
Sbjct: 74 IVSSLLAS----SPTPQPQVFDLLIRTYTQSRK------------PREAFEAFRLLLDHR 117
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGF---AIEILNCMINDGFCVDGKTCSLILSSV 179
+ A A +V ++R G+ A E +++ V+ T ++++ S
Sbjct: 118 VPVPASASNALLAV----------LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSY 167
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C+ + + + + EM+K +V + +I + + V A+ +++ M + G+KP
Sbjct: 168 CKTLEFDGADTV--ISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKP 225
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
IV Y VL G+ + KA+E+F + + PDV ++N+ I G C+ V+ +K
Sbjct: 226 GIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFY 285
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M+ PDV++++ L+ + E++ ++EMK G+V + Y+++I G
Sbjct: 286 KEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRA 345
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
G + EA + +E + G ++ + GLC++ + A +LL +M ++ V+P +
Sbjct: 346 GSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTF 405
Query: 420 EALLLSSVSKLDFVNTSFIRLVDQIL 445
L+ + +F N ++L D +L
Sbjct: 406 TTLIHGYCRQGNFENA--LQLFDTLL 429
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 2/260 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G DG ++++ C +S E L EM G +V Y ++ L K+ ++
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMS--EALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA +LN+M+ G+ PD+ +T +++G Q ++ A +LFD LL L PDV TYN I
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G+C++ ++ ++ M P+ ITY+ L+ + C+ ++ + EM KG +
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL 504
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N++TY+ +I G G++ + L++ + F+ I G + + A +
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNV 564
Query: 404 LKQMADKDVSPGARVWEALL 423
M + V P A + ++
Sbjct: 565 FNIMEKEMVRPDAVTYNMII 584
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 137/307 (44%), Gaps = 25/307 (8%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRF 132
+ C P Y+ ++ L + + D +L+ +E+R TP+ F LI Y F
Sbjct: 361 FGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG--VTPDLCTFTTLIHGYCRQGNF 418
Query: 133 QDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELL 191
++++ LF + + R+ D T + ++ +C + DL+ ++EL
Sbjct: 419 ENALQLFDTLLRQRLR------------------PDVVTYNSLIDGMCRKGDLAKANELW 460
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+M + Y+ +I S +K +V DA G L++M G P+I Y ++ G
Sbjct: 461 ---DDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGY 517
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ K ++ ++ + PD+ T+N I+G K+ N+ + ME+ +PD
Sbjct: 518 CRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDA 577
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TYN ++ + + + K M GI + TY +I+G + G+ +A L +E
Sbjct: 578 VTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDE 637
Query: 372 ALNKGLC 378
+++G
Sbjct: 638 MIHRGFA 644
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 137/304 (45%), Gaps = 37/304 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + A+ + + M+ G D T + +L+ +C+Q L E L + EM++ G
Sbjct: 344 RAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKL--LNEMEERGVTPD 401
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I ++ +AL + + + ++PD+V Y +++G+ + D KA EL+D
Sbjct: 402 LCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWD 461
Query: 266 -----------------------------------ELLVLGLVPDVYTYNVYINGLCKQN 290
E++ G +P++ TYN I G C+
Sbjct: 462 DMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSG 521
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
NV+ G + + M + PD+IT+NTL+ K ++ + M+ + + + TY+
Sbjct: 522 NVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYN 581
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++I+G + +G++ +A + + + G+ + I G G ++A +L +M +
Sbjct: 582 MIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHR 641
Query: 411 DVSP 414
+P
Sbjct: 642 GFAP 645
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 125/235 (53%), Gaps = 2/235 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S I+ S+C +D + EM++ G + Y ++I + DA +L +M
Sbjct: 259 SAIIDSLC--KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I PD+V Y ++N + + + +AEEL+DE+L G++P+ TY+ I+G CKQN +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+A M M G P++IT+NTL+ C + ++ EL+ EM G+V + TY+ +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I G GD+ A LL+E ++ GLC D + GLC G ++ ALE+ K M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 44/312 (14%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIE 155
+P I F LI Y A R D + L +++ + + + + A++
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L MI+ G C D TC +L +C+ L D + +
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLK---------------------DALEMFKV 490
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ K +K DA N G++PD+ Y ++++G+I + +++AEEL++E+ G+VPD
Sbjct: 491 MQKSKKDLDASHPFN-----GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TY+ I+GLCKQ+ ++ +M M P+V+T+ TL+ CK ++ EL
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM +GIV N TY +I G G+I A + +E ++ G+ + + GL +
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Query: 396 LVRKALELLKQM 407
+++A+ +L+++
Sbjct: 666 ELKRAVAMLEKL 677
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 167/375 (44%), Gaps = 33/375 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSV 136
P Y +I +L ++ + D ++ ++++ F P+ F + +I + + R+ D+
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF--PDLFTYNSMIVGFCSSGRWSDAE 310
Query: 137 NLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
L ++ + +I+ + A E+ + M+ G + T S ++
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C+Q L + E + ++ K G ++ + +I +++ D + +L++M G+
Sbjct: 371 CKQNRLDAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D Y +++G + D A +L E++ GL PD+ T + ++GLC ++ ++M
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMF 488
Query: 300 ACMEEL-----------GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
M++ G +PDV TYN L+ L + EL +EM +GIV + T
Sbjct: 489 KVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTIT 548
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
YS MIDGL + + EA + + +K F I G C+ G V LEL +M
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 608
Query: 409 DKDVSPGARVWEALL 423
+ + A + L+
Sbjct: 609 RRGIVANAITYITLI 623
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 129/259 (49%), Gaps = 3/259 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ Q+M++ + +T +I+ K+ AL ++ G+ PD+V + +
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTL 155
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ V++ +A LF ++ P+V T+ +NGLC++ + + ++ M E G
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P ITY T++ +CK+ + +L+++M + I+ N+ YS +ID L G +A
Sbjct: 216 QPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
L E KG+ ++ I G C G A +LL++M ++ +SP + AL+ +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335
Query: 427 VSKLDFVNTSFIRLVDQIL 445
V + F L D++L
Sbjct: 336 VKEGKFFEAE--ELYDEML 352
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 13/293 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A + M G + T + ++ C + + D+ + + EM + G
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI--DDGMELLHEMTETGLVADTT 431
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + AL +L +M S G+ PDIV +L+G+ A E+F +
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
G+ PDV TYN+ I+GL + ++ M G PD ITY++
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M K N+ T++ +I+G G + + L E +G
Sbjct: 552 MIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + + ICG + G + AL++ ++M V P +L SK
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 36/202 (17%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +LF ++L +P V + + + + + I + ME + D+ ++ L++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122
Query: 320 ALCKVREL--------------------------------NRLRE---LVKEMKWKGIVL 344
C +L +R+ E L +M
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ T++ +++GL +G I+EA LL+ + GL + + G+C+ G AL+LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLL 242
Query: 405 KQMAD-KDVSPGARVWEALLLS 425
++M + + P ++ A++ S
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDS 264
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 125/235 (53%), Gaps = 2/235 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S I+ S+C +D + EM++ G + Y ++I + DA +L +M
Sbjct: 259 SAIIDSLC--KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I PD+V Y ++N + + + +AEEL+DE+L G++P+ TY+ I+G CKQN +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+A M M G P++IT+NTL+ C + ++ EL+ EM G+V + TY+ +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I G GD+ A LL+E ++ GLC D + GLC G ++ ALE+ K M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 44/312 (14%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIE 155
+P I F LI Y A R D + L +++ + + + + A++
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L MI+ G C D TC +L +C+ L D + +
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLK---------------------DALEMFKV 490
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ K +K DA N G++PD+ Y ++++G+I + +++AEEL++E+ G+VPD
Sbjct: 491 MQKSKKDLDASHPFN-----GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TY+ I+GLCKQ+ ++ +M M P+V+T+ TL+ CK ++ EL
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM +GIV N TY +I G G+I A + +E ++ G+ + + GL +
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Query: 396 LVRKALELLKQM 407
+++A+ +L+++
Sbjct: 666 ELKRAVAMLEKL 677
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 166/370 (44%), Gaps = 33/370 (8%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I +L ++ + D ++ ++++ F P+ F + +I + + R+ D+ L +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIF--PDLFTYNSMIVGFCSSGRWSDAEQLLQE 315
Query: 142 IPKFRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + +I+ + A E+ + M+ G + T S ++ C+Q
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L + E + ++ K G ++ + +I +++ D + +L++M G+ D Y
Sbjct: 376 LDAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++G + D A +L E++ GL PD+ T + ++GLC ++ ++M M++
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Query: 305 L-----------GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G +PDV TYN L+ L + EL +EM +GIV + TYS MI
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DGL + + EA + + +K F I G C+ G V LEL +M + +
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 414 PGARVWEALL 423
A + L+
Sbjct: 614 ANAITYITLI 623
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 130/262 (49%), Gaps = 9/262 (3%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ Q+M++ + +T +I+ K+ AL ++ G+ PD+V + +
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTL 155
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ V++ +A LF ++ P+V T+ +NGLC++ + + ++ M E G
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 308 KPDVITYNTLLQALCK----VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+P ITY T++ +CK V LN LR++ +E+ I+ N+ YS +ID L G
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKM-EEVSH--IIPNVVIYSAIIDSLCKDGRHS 272
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A L E KG+ ++ I G C G A +LL++M ++ +SP + AL+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 424 LSSVSKLDFVNTSFIRLVDQIL 445
+ V + F L D++L
Sbjct: 333 NAFVKEGKFFEAE--ELYDEML 352
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 13/293 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A + M G + T + ++ C + + D+ + + EM + G
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI--DDGMELLHEMTETGLVADTT 431
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + AL +L +M S G+ PDIV +L+G+ A E+F +
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
G+ PDV TYN+ I+GL + ++ M G PD ITY++
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M K N+ T++ +I+G G + + L E +G
Sbjct: 552 MIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + + ICG + G + AL++ ++M V P +L SK
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 83/212 (39%), Gaps = 35/212 (16%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA+ + + M P +V + ++ V+ E L+ ++ + D+Y++ + I
Sbjct: 62 DAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILI 121
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
C + + + + +LG PDV+T+NTLL LC ++ L +M
Sbjct: 122 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR 181
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ T++ +++GL C+ G + +A+ L
Sbjct: 182 PNVVTFTTLMNGL-----------------------------------CREGRIVEAVAL 206
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
L +M + + P + ++ K D V+
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 125/235 (53%), Gaps = 2/235 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S I+ S+C +D + EM++ G + Y ++I + DA +L +M
Sbjct: 259 SAIIDSLC--KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I PD+V Y ++N + + + +AEEL+DE+L G++P+ TY+ I+G CKQN +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+A M M G P++IT+NTL+ C + ++ EL+ EM G+V + TY+ +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I G GD+ A LL+E ++ GLC D + GLC G ++ ALE+ K M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 44/312 (14%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIE 155
+P I F LI Y A R D + L +++ + + + + A++
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L MI+ G C D TC +L +C+ L D + +
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLK---------------------DALEMFKV 490
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ K +K DA N G++PD+ Y ++++G+I + +++AEEL++E+ G+VPD
Sbjct: 491 MQKSKKDLDASHPFN-----GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TY+ I+GLCKQ+ ++ +M M P+V+T+ TL+ CK ++ EL
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM +GIV N TY +I G G+I A + +E ++ G+ + + GL +
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Query: 396 LVRKALELLKQM 407
+++A+ +L+++
Sbjct: 666 ELKRAVAMLEKL 677
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 166/370 (44%), Gaps = 33/370 (8%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I +L ++ + D ++ ++++ F P+ F + +I + + R+ D+ L +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIF--PDLFTYNSMIVGFCSSGRWSDAEQLLQE 315
Query: 142 IPKFRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + +I+ + A E+ + M+ G + T S ++ C+Q
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L + E + ++ K G ++ + +I +++ D + +L++M G+ D Y
Sbjct: 376 LDAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++G + D A +L E++ GL PD+ T + ++GLC ++ ++M M++
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Query: 305 L-----------GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G +PDV TYN L+ L + EL +EM +GIV + TYS MI
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DGL + + EA + + +K F I G C+ G V LEL +M + +
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 414 PGARVWEALL 423
A + L+
Sbjct: 614 ANAITYITLI 623
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 130/262 (49%), Gaps = 9/262 (3%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ Q+M++ + +T +I+ K+ AL ++ G+ PD+V + +
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTL 155
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ V++ +A LF ++ P+V T+ +NGLC++ + + ++ M E G
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 308 KPDVITYNTLLQALCK----VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+P ITY T++ +CK V LN LR++ +E+ I+ N+ YS +ID L G
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKM-EEVSH--IIPNVVIYSAIIDSLCKDGRHS 272
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A L E KG+ ++ I G C G A +LL++M ++ +SP + AL+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 424 LSSVSKLDFVNTSFIRLVDQIL 445
+ V + F L D++L
Sbjct: 333 NAFVKEGKFFEAE--ELYDEML 352
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 13/293 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A + M G + T + ++ C + + D+ + + EM + G
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI--DDGMELLHEMTETGLVADTT 431
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + AL +L +M S G+ PDIV +L+G+ A E+F +
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
G+ PDV TYN+ I+GL + ++ M G PD ITY++
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M K N+ T++ +I+G G + + L E +G
Sbjct: 552 MIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + + ICG + G + AL++ ++M V P +L SK
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 36/202 (17%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +LF ++L +P V + + + + + I + ME + D+ ++ L++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122
Query: 320 ALCKVREL--------------------------------NRLRE---LVKEMKWKGIVL 344
C +L +R+ E L +M
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ T++ +++GL +G I+EA LL+ + GL + + G+C++G AL LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 405 KQMAD-KDVSPGARVWEALLLS 425
++M + + P ++ A++ S
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDS 264
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 125/235 (53%), Gaps = 2/235 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S I+ S+C +D + EM++ G + Y ++I + DA +L +M
Sbjct: 259 SAIIDSLC--KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I PD+V Y ++N + + + +AEEL+DE+L G++P+ TY+ I+G CKQN +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+A M M G P++IT+NTL+ C + ++ EL+ EM G+V + TY+ +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I G GD+ A LL+E ++ GLC D + GLC G ++ ALE+ K M
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 44/312 (14%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIE 155
+P I F LI Y A R D + L +++ + + + + A++
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L MI+ G C D TC +L +C+ L D + +
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLK---------------------DALEMFKV 490
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ K +K DA N G++PD+ Y ++++G+I + +++AEEL++E+ G+VPD
Sbjct: 491 MQKSKKDLDASHPFN-----GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TY+ I+GLCKQ+ ++ +M M P+V+T+ TL+ CK ++ EL
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM +GIV N TY +I G G+I A + +E ++ G+ + + GL +
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665
Query: 396 LVRKALELLKQM 407
+++A+ +L+++
Sbjct: 666 ELKRAVAMLEKL 677
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 166/370 (44%), Gaps = 33/370 (8%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I +L ++ + D ++ ++++ F P+ F + +I + + R+ D+ L +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIF--PDLFTYNSMIVGFCSSGRWSDAEQLLQE 315
Query: 142 IPKFRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + +I+ + A E+ + M+ G + T S ++ C+Q
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L + E + ++ K G ++ + +I +++ D + +L++M G+ D Y
Sbjct: 376 LDAAEHMFYLMATK--GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTY 433
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++G + D A +L E++ GL PD+ T + ++GLC ++ ++M M++
Sbjct: 434 NTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Query: 305 L-----------GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G +PDV TYN L+ L + EL +EM +GIV + TYS MI
Sbjct: 494 SKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DGL + + EA + + +K F I G C+ G V LEL +M + +
Sbjct: 554 DGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 414 PGARVWEALL 423
A + L+
Sbjct: 614 ANAITYITLI 623
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 130/262 (49%), Gaps = 9/262 (3%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ Q+M++ + + +I+ K+ AL ++ G+ PD+V +T +
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ V++ +A LF ++ P+V T+ +NGLC++ + + ++ M E G
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 308 KPDVITYNTLLQALCK----VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+P ITY T++ +CK V LN LR++ +E+ I+ N+ YS +ID L G
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKM-EEVSH--IIPNVVIYSAIIDSLCKDGRHS 272
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A L E KG+ ++ I G C G A +LL++M ++ +SP + AL+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 424 LSSVSKLDFVNTSFIRLVDQIL 445
+ V + F L D++L
Sbjct: 333 NAFVKEGKFFEAE--ELYDEML 352
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 13/293 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A + M G + T + ++ C + + D+ + + EM + G
Sbjct: 374 NRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI--DDGMELLHEMTETGLVADTT 431
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + AL +L +M S G+ PDIV +L+G+ A E+F +
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
G+ PDV TYN+ I+GL + ++ M G PD ITY++
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M K N+ T++ +I+G G + + L E +G
Sbjct: 552 MIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + + ICG + G + AL++ ++M V P +L SK
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 664
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 36/202 (17%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +LF ++L +P V + + + + + I + ME + D+ ++N L++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 320 ALCKVREL--------------------------------NRLRE---LVKEMKWKGIVL 344
C +L +R+ E L +M
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRP 182
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ T++ +++GL +G I+EA LL+ + GL + + G+C++G AL LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 405 KQMAD-KDVSPGARVWEALLLS 425
++M + + P ++ A++ S
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDS 264
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 153/288 (53%), Gaps = 4/288 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+I+ V A E+L + GF D T CSLI + +C + D+ + L E + G
Sbjct: 303 KISMVQEATELLKDAVFKGFVPDQVTYCSLI-NGLCAEGDV--ERALELFNEAQAKGIKP 359
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y ++++ L + + AL ++N+M +G PDI Y +V+NG+ + A +
Sbjct: 360 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 419
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ ++ G +PDV+T+N I+G CK+ +++ ++++ M E G PD ITYN++L LCK
Sbjct: 420 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 479
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++N + E +EM KG N TY+I+I+ + EA ++ + +GL + F
Sbjct: 480 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 539
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ I G C+ G + A L +++ +K S A + L+ + KL+
Sbjct: 540 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNM 587
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 149/288 (51%), Gaps = 5/288 (1%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L +I G ++ T ++ + +CE L E + V M+ +V Y +IR
Sbjct: 209 LLGKVIQRGMSINLFTYNIWIRGLCEAGRLP--EAVRLVDGMRAYAVP-DVVTYNTLIRG 265
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L KK +A+ L +M + G PD Y +++G +A EL + + G VPD
Sbjct: 266 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 325
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TY INGLC + +VE +++ + G KPD++ YN+L++ LC + +++
Sbjct: 326 QVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 385
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM +G ++QTY+I+I+GL G+I +A ++ +A+ KG F+ I G C+R
Sbjct: 386 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 445
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
+ AL+L+++M + ++P + ++L L K++ VN +F ++
Sbjct: 446 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 181/416 (43%), Gaps = 60/416 (14%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
AY +I+ LA + + + + R + T +++ I+ YA A R +D+V+ F +
Sbjct: 17 AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 76
Query: 142 IPKFRINRVGFAIE-ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+ F A I++ +++ + + + + DL + ++
Sbjct: 77 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHT-------HTIRLR 129
Query: 201 GFCF-----------------GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
FC G V Y V+ L DA + +QM + P++
Sbjct: 130 SFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAA 189
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGL------------------------------- 272
+ VL+ + + D ++A L +++ G+
Sbjct: 190 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR 249
Query: 273 ---VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
VPDV TYN I GLCK++ + + + M G PD TYNT++ CK+ +
Sbjct: 250 AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQE 309
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL+K+ +KG V + TY +I+GL ++GD+ A L EA KG+ +++ +
Sbjct: 310 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVK 369
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
GLC +GL+ AL+++ +MA++ P + + ++++ + K+ ++ + + + D I+
Sbjct: 370 GLCLQGLILHALQVMNEMAEEGCHPDIQTYN-IVINGLCKMGNISDATVVMNDAIM 424
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 145/297 (48%), Gaps = 3/297 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++++N M +G D +T +++++ +C+ ++S ++ MK G+ + + +
Sbjct: 380 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK--GYLPDVFTFNTL 437
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ K+ AL ++ +M GI PD + Y VLNG+ + E F E+++ G
Sbjct: 438 IDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 497
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN+ I C+ N +E K+I M + G PD +++NTL+ C+ +L
Sbjct: 498 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 557
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++++ KG T++ +I + K ++ A + +E L+KG S + I G C
Sbjct: 558 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 617
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS-SVSKLDFVNTSFIRLVDQILNTP 448
+ V +A L +M K P + ++ S +V+ F I ++ +I P
Sbjct: 618 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +++ M G Y +I K V +A +L G PD V Y ++
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG+ + D +A ELF+E G+ PD+ YN + GLC Q + ++++ M E G
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 393
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD+ TYN ++ LCK+ ++ ++ + KG + ++ T++ +IDG + + A L
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 453
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+E G+ + ++ + GLC+ G V + E ++M K P + L+
Sbjct: 454 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 508
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 20/185 (10%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P P Y+ +I+ +++ + S V+ + + E F LI + +
Sbjct: 496 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ-EGLHPDAVSFNTLIYGFCRNGDLEG 554
Query: 135 SVNLFYKIPKFRINRVG-----------------FAIEILNCMINDGFCVDGKTCSLILS 177
+ LF K+ + + A +I + M++ G D T +++
Sbjct: 555 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 614
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
C+ ++ D + EM K GF M + VI SL +VF A+GI++ M G+
Sbjct: 615 GSCKTANV--DRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 672
Query: 238 KPDIV 242
P++V
Sbjct: 673 VPEVV 677
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 153/288 (53%), Gaps = 4/288 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+I+ V A E+L + GF D T CSLI + +C + D+ + L E + G
Sbjct: 302 KISMVQEATELLKDAVFKGFVPDQVTYCSLI-NGLCAEGDV--ERALELFNEAQAKGIKP 358
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y ++++ L + + AL ++N+M +G PDI Y +V+NG+ + A +
Sbjct: 359 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 418
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ ++ G +PDV+T+N I+G CK+ +++ ++++ M E G PD ITYN++L LCK
Sbjct: 419 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 478
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++N + E +EM KG N TY+I+I+ + EA ++ + +GL + F
Sbjct: 479 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 538
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ I G C+ G + A L +++ +K S A + L+ + KL+
Sbjct: 539 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNM 586
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 149/288 (51%), Gaps = 5/288 (1%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L +I G ++ T ++ + +CE L E + V M+ +V Y +IR
Sbjct: 208 LLGKVIQRGMSINLFTYNIWIRGLCEAGRLP--EAVRLVDGMRAYAVP-DVVTYNTLIRG 264
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L KK +A+ L +M + G PD Y +++G +A EL + + G VPD
Sbjct: 265 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 324
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TY INGLC + +VE +++ + G KPD++ YN+L++ LC + +++
Sbjct: 325 QVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 384
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM +G ++QTY+I+I+GL G+I +A ++ +A+ KG F+ I G C+R
Sbjct: 385 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 444
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
+ AL+L+++M + ++P + ++L L K++ VN +F ++
Sbjct: 445 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 181/416 (43%), Gaps = 60/416 (14%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
AY +I+ LA + + + + R + T +++ I+ YA A R +D+V+ F +
Sbjct: 16 AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 75
Query: 142 IPKFRINRVGFAIE-ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+ F A I++ +++ + + + + DL + ++
Sbjct: 76 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHT-------HTIRLR 128
Query: 201 GFCF-----------------GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
FC G V Y V+ L DA + +QM + P++
Sbjct: 129 SFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAA 188
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGL------------------------------- 272
+ VL+ + + D ++A L +++ G+
Sbjct: 189 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR 248
Query: 273 ---VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
VPDV TYN I GLCK++ + + + M G PD TYNT++ CK+ +
Sbjct: 249 AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQE 308
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL+K+ +KG V + TY +I+GL ++GD+ A L EA KG+ +++ +
Sbjct: 309 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVK 368
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
GLC +GL+ AL+++ +MA++ P + + ++++ + K+ ++ + + + D I+
Sbjct: 369 GLCLQGLILHALQVMNEMAEEGCHPDIQTYN-IVINGLCKMGNISDATVVMNDAIM 423
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 145/297 (48%), Gaps = 3/297 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++++N M +G D +T +++++ +C+ ++S ++ MK G+ + + +
Sbjct: 379 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK--GYLPDVFTFNTL 436
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ K+ AL ++ +M GI PD + Y VLNG+ + E F E+++ G
Sbjct: 437 IDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 496
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN+ I C+ N +E K+I M + G PD +++NTL+ C+ +L
Sbjct: 497 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 556
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++++ KG T++ +I + K ++ A + +E L+KG S + I G C
Sbjct: 557 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 616
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS-SVSKLDFVNTSFIRLVDQILNTP 448
+ V +A L +M K P + ++ S +V+ F I ++ +I P
Sbjct: 617 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +++ M G Y +I K V +A +L G PD V Y ++
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG+ + D +A ELF+E G+ PD+ YN + GLC Q + ++++ M E G
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 392
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD+ TYN ++ LCK+ ++ ++ + KG + ++ T++ +IDG + + A L
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 452
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+E G+ + ++ + GLC+ G V + E ++M K P + L+
Sbjct: 453 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 507
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 20/185 (10%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P P Y+ +I+ +++ + S V+ + + E F LI + +
Sbjct: 495 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ-EGLHPDAVSFNTLIYGFCRNGDLEG 553
Query: 135 SVNLFYKIPKFRINRVG-----------------FAIEILNCMINDGFCVDGKTCSLILS 177
+ LF K+ + + A +I + M++ G D T +++
Sbjct: 554 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 613
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
C+ ++ D + EM K GF M + VI SL +VF A+GI++ M G+
Sbjct: 614 GSCKTANV--DRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 671
Query: 238 KPDIV 242
P++V
Sbjct: 672 VPEVV 676
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 157/327 (48%), Gaps = 9/327 (2%)
Query: 99 ISSVLDHIEKRENFETPEFIF--IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEI 156
+SVL + K F+ + +F +D D F + F R+ V A++
Sbjct: 230 FNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC-----RVGEVEEAMKF 284
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
M G D + S ++ + + D +++EMK LG V YT VI
Sbjct: 285 YKEMQQRGVTPDVVSFSCLIGLFSTRGKM--DHAAAYLREMKGLGLVPDGVIYTMVIGGF 342
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
+ + +AL + ++M G PD+V Y +LNG+ Q + AEEL +E+ G+ PD+
Sbjct: 343 CRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDL 402
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
T+ I+G C+ N E +++ + +PDV+ YN+L+ +C+ +L + EL +
Sbjct: 403 CTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDD 462
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M + I N TYSI+ID KG + EA G L+E ++KG ++ I G C+ G
Sbjct: 463 MHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGN 522
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
V+K + L++M ++ P + L+
Sbjct: 523 VKKGQQFLQKMMQDNILPDLITFNTLI 549
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 2/286 (0%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
+FR V AI +++ M N G T + +L +C+ R D+ + M +
Sbjct: 202 RFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRF--DKAKEVFRAMDQCSVA 259
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ + +I + +V +A+ +M+ G+ PD+V ++ ++ + A
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E+ LGLVPD Y + I G C+ ++ +++ M LG PDV+TYNTLL LCK
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
L EL+ EMK +G+ +L T++ +I G G+ +A L + L++ L
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++ I G+C++G + KA EL M +++ P + L+ S K
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEK 485
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 153/314 (48%), Gaps = 19/314 (6%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRI--------------NRVGF---AIEILNCM 160
+F LI+TY + + +++ F + R+ +R G+ A E +
Sbjct: 89 VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRLV 148
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
++ V+ T ++++ S C + L D+ + EM+K +V + +I + +
Sbjct: 149 LSSDSEVNAYTLNIMVHSYC--KSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAG 206
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
V A+ +++ M + G+KP IV + VL G+ + KA+E+F + + PDV ++N
Sbjct: 207 DVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFN 266
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+ I G C+ VE +K M++ G PDV++++ L+ +++ ++EMK
Sbjct: 267 ILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGL 326
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G+V + Y+++I G G + EA + +E + G ++ + GLC++ + A
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDA 386
Query: 401 LELLKQMADKDVSP 414
ELL +M ++ V+P
Sbjct: 387 EELLNEMKERGVTP 400
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
++ A L M G DG ++++ C +S E L EM LG +V
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMS--EALRVRDEMVGLGCLPDVV 368
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ L K+ ++ DA +LN+MK G+ PD+ +T +++G ++ KA +LFD L
Sbjct: 369 TYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL 428
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L L PDV YN I+G+C++ ++ ++ M P+ +TY+ L+ + C+ ++
Sbjct: 429 LHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQV 488
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ EM KG + N+ TY+ +I G G++ + L++ + + F+
Sbjct: 489 EEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTL 548
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + + A + M + V P A + ++
Sbjct: 549 IHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMII 584
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 140/308 (45%), Gaps = 29/308 (9%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQ 133
C P Y+ ++ L + + D +L+ E +E TP+ F LI Y F+
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEELLN--EMKERGVTPDLCTFTTLIHGYCRDGNFE 419
Query: 134 DSVNLFYKI--PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDEL 190
++ LF + + R + V + N +I DG C G DL+ ++EL
Sbjct: 420 KALQLFDTLLHQRLRPDVVAY-----NSLI-DGMCRKG--------------DLAKANEL 459
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+M V Y+ +I S +K +V +A G L++M S G P+I+ Y ++ G
Sbjct: 460 W---DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKG 516
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ K ++ +++ ++PD+ T+N I+G K+ N+ + ME+ +PD
Sbjct: 517 YCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPD 576
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+TYN ++ + + + K+M GI + TY +I+G + G+ EA L +
Sbjct: 577 AVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHD 636
Query: 371 EALNKGLC 378
E +++G
Sbjct: 637 EMMHRGFA 644
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 138/305 (45%), Gaps = 39/305 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCF 204
R + A+ + + M+ G D T + +L+ +C+Q R L ++ELL EMK+ G
Sbjct: 344 RAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL---NEMKERGVTP 400
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ +T +I + AL + + + ++PD+V Y +++G+ + D KA EL+
Sbjct: 401 DLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELW 460
Query: 265 D-----------------------------------ELLVLGLVPDVYTYNVYINGLCKQ 289
D E++ G +P++ TYN I G C+
Sbjct: 461 DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS 520
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
NV+ G + + M + PD+IT+NTL+ K ++ + M+ + + + TY
Sbjct: 521 GNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTY 580
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+++I+G + +G++ EA + ++ G+ + I G G ++A +L +M
Sbjct: 581 NMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMH 640
Query: 410 KDVSP 414
+ +P
Sbjct: 641 RGFAP 645
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 117/293 (39%), Gaps = 35/293 (11%)
Query: 28 KWHQTLDQQQAKQNVKQSLTTPPTK----------QQQQIPKQPHILSSLLHSFSIYNCE 77
K H+ LD ++ +K+ TP + K + +LLH
Sbjct: 379 KQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ----RLR 434
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AY+ +I + + + D + RE F + LI ++ + + ++
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPN-HVTYSILIDSHCEKGQVEE--- 490
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
A L+ M++ G + T + I+ C ++ + F+Q+M
Sbjct: 491 ---------------AFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQ--FLQKM 533
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
+ ++ + +I +K+E + A + N M+ + ++PD V Y M++NG Q +
Sbjct: 534 MQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNM 593
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+A +F ++ G+ PD YTY ING N + ++ M G PD
Sbjct: 594 EEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 152/308 (49%), Gaps = 20/308 (6%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
LI + + D++ LF K+ IN + IL DGFC +G+ V E
Sbjct: 237 LISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILV----DGFCKEGR--------VKE 284
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+++ + M K G +V Y +++ ++V A I N M G+ ++
Sbjct: 285 AKNV--------LAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANV 336
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y +++NG + +A LF E+ ++PDV TYN I+GLCK + +K++
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDE 396
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M + G D ITYN++L ALCK ++++ L+ +MK +GI ++ TY+I+IDGL G
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGR 456
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ +A + E+ L KG + I G C L KAL LL +M D P A+ +E
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEI 516
Query: 422 LLLSSVSK 429
++LS K
Sbjct: 517 IILSLFEK 524
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 124/218 (56%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I S+ K + V +A + ++M S GI PD+V Y+ +++G + A LF+
Sbjct: 196 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFN 255
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ + PDVYT+++ ++G CK+ V+ ++A M + G KPDV+TY +L+ C V+
Sbjct: 256 KMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVK 315
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++N+ + + M G+ N+Q+Y+IMI+G + EA L +E K + ++
Sbjct: 316 QVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYN 375
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G + AL+L+ +M D+ V + ++L
Sbjct: 376 SLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 113/229 (49%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM+ G +V + +I + + + + G +P+ + T ++ G+ ++
Sbjct: 80 REMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLK 139
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A D+++ LG + Y INGLCK A ++++ ++ +P+V+ Y
Sbjct: 140 GQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 199
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NT++ ++CKV+ +N +L EM KGI ++ TYS +I G G + +A GL + ++
Sbjct: 200 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMIS 259
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + F + G C+ G V++A +L M + + P + +L+
Sbjct: 260 EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLM 308
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 2/199 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I +V A+ + M D T + ++ +C+ +S L V EM G
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISY--ALKLVDEMHDRGVPHD 405
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +++ +L K +V A+ +L +MK +GI+PD+ YT++++G+ A+ +F+
Sbjct: 406 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFE 465
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+LLV G VYTY V I G C + + + +++ ME+ G P+ TY ++ +L +
Sbjct: 466 DLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKD 525
Query: 326 ELNRLRELVKEMKWKGIVL 344
E + +L++EM +G++
Sbjct: 526 ENDMAEKLLREMIARGLLF 544
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ +V A I N M G + ++ +++++ C+ + + DE + +EM +
Sbjct: 314 VKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKV--DEAMNLFKEMHCKNIIPDV 371
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K K+ AL ++++M G+ D + Y +L+ + KA L +
Sbjct: 372 VTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 431
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ PD+YTY + I+GLCK ++ + + G V TY ++Q C
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDL 491
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++ L+ +M+ G + N +TY I+I L K + A LL E + +GL
Sbjct: 492 FDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
Q+D F+ +L + P ++ + + L K N + I + ME G D++T
Sbjct: 34 QDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVT 93
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
+N L+ ++ + + + KG N T + +I GL KG I +A ++ +
Sbjct: 94 FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV 153
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
G + I GLC+ G AL+LL+++ K V P ++ ++ S+ K+ V
Sbjct: 154 ALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT-IIDSMCKVKLV 212
Query: 434 NTSF 437
N +F
Sbjct: 213 NEAF 216
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 168/349 (48%), Gaps = 21/349 (6%)
Query: 79 PPEAYHFVI--KTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P AY F I K S+ S I K F F L+ R +++
Sbjct: 110 PCNAYSFTILMKCFCSCSKLPFALSTFGKITKL-GFHPTVVTFSTLLHGLCVEDRISEAL 168
Query: 137 NLFYKIPK-------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+LF+++ K R RV A+ +L+ M+ DG + T I+ +C+
Sbjct: 169 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 228
Query: 184 D-LSSDELLGFVQEMKKLG---FCFGMVDYTNVIRSLVKKEKVFDALGILNQM-KSDGIK 238
D +S+ LL ++E+ + + + T +I + +A +L +M + I
Sbjct: 229 DTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKIS 288
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD+V Y ++N + + + +AEEL+DE+L G++P TY+ I+G CKQN ++A M
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M G PD+IT+NTL+ C+ + ++ +L+ EM G+V N TY+ +I G
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
GD+ A LL+E ++ G+C + + GLC G ++ ALE+ K M
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 168/358 (46%), Gaps = 31/358 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y+ +I + +F + + D + R + + +I + +R + +
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPST-ITYSSMIDGFCKQNRLDAAEH 347
Query: 138 LFY---------KIPKF--------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+FY I F R RV I++L+ M G + T + ++ C
Sbjct: 348 MFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 407
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS------ 234
+ DL++ + L +QEM G C +V ++ L K+ DAL + M+
Sbjct: 408 QVGDLNAAQDL--LQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 465
Query: 235 -----DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+G++PD+ Y ++++G+I + +++AEEL++E+ G+VPD TYN I+GLCKQ
Sbjct: 466 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQ 525
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ ++ +M M P+V+T+ TL+ CK ++ EL EM +GIV N TY
Sbjct: 526 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 585
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+I G G+I A + +E + G+ + + GL + +++A+ +L+ +
Sbjct: 586 ITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 178/423 (42%), Gaps = 82/423 (19%)
Query: 64 LSSLLHSFSIYN------------CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKREN 111
S+LLH + + C+P + ++ L + + ++LD + + +
Sbjct: 151 FSTLLHGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLE-DG 209
Query: 112 FETPEFIFIDLIKTYADAHRFQDSVNLFYK---IPKFRINRVGFAIEILNCMINDGFCVD 168
+ + + ++ ++NL K + + N V + +E CMIN GFC
Sbjct: 210 LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMIN-GFCSS 268
Query: 169 GK--TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
G+ +L + E++ +S D +V Y +I + VK+ K F+A
Sbjct: 269 GRWSEAQQLLQEMLERKKISPD-----------------VVTYNALINAFVKEGKFFEAE 311
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ ++M GI P + Y+ +++G Q AE +F + G PD+ T+N I G
Sbjct: 312 ELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY 371
Query: 287 CKQNNVEAGIKMIACMEELGSK-----------------------------------PDV 311
C+ V+ GIK++ M E G P+V
Sbjct: 372 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNV 431
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMK-----------WKGIVLNLQTYSIMIDGLASKG 360
+T NTLL LC +L E+ K M+ + G+ ++QTY+I+I GL ++G
Sbjct: 432 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEG 491
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+EA L EE ++G+ + ++ I GLC++ + +A ++ M K SP +
Sbjct: 492 KFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 551
Query: 421 ALL 423
L+
Sbjct: 552 TLI 554
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 141/312 (45%), Gaps = 20/312 (6%)
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGF-AIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
K D + +N F K KF F A E+ + M+ G T S ++ C+Q
Sbjct: 286 KISPDVVTYNALINAFVKEGKF------FEAEELYDEMLPRGIIPSTITYSSMIDGFCKQ 339
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
L + E + ++ K G ++ + +I + ++V D + +L++M G+ + +
Sbjct: 340 NRLDAAEHMFYLMATK--GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 397
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
YT +++G D A++L E++ G+ P+V T N ++GLC ++ ++M M
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457
Query: 303 EEL-----------GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
++ G +PDV TYN L+ L + EL +EM +GIV + TY+
Sbjct: 458 QKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNS 517
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I GL + + EA + + +K F I G C+ G V LEL +M +
Sbjct: 518 VIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 577
Query: 412 VSPGARVWEALL 423
+ A + L+
Sbjct: 578 IVANAITYITLI 589
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 13/293 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A + M G D T + +++ C + + D+ + + EM + G +
Sbjct: 340 NRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRV--DDGIKLLHEMTEAGLVANTI 397
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I + + A +L +M S G+ P++V +L+G+ A E+F +
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
G+ PDV TYN+ I+GL + ++ M G PD ITYN+
Sbjct: 458 QKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNS 517
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M K N+ T++ +I+G G + + L E +G
Sbjct: 518 VIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 577
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + + I G + G + AL++ ++M V P +L SK
Sbjct: 578 IVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSK 630
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS-VC 180
L+ D + +D++ +F + K ++ +I +G D +T ++++S +
Sbjct: 437 LLDGLCDNGKLKDALEMFKAMQKSKM-------DIDASHPFNGVEPDVQTYNILISGLIN 489
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
E + L ++EL +EM G + Y +VI L K+ ++ +A + + M S P+
Sbjct: 490 EGKFLEAEELY---EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPN 546
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+V +T ++NG ELF E+ G+V + TY I+G K N+ + +
Sbjct: 547 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQ 606
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
M G PD IT +L L EL R ++++++
Sbjct: 607 EMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 171/351 (48%), Gaps = 39/351 (11%)
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
I+L++ D F +N F R+ RV FA +L +I GF D T S +++ +
Sbjct: 110 IELLRIERDVFHFNILINCFS-----RLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGL 164
Query: 180 CEQRDLSS-----DELL----------------------------GFVQEMKKLGFCFGM 206
C + + DE++ G +++M K G +
Sbjct: 165 CFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDI 224
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y +I L K V +AL I +++K G++PD+ Y+++++G+ + +A LF+E
Sbjct: 225 VIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNE 284
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ L ++PDV T+N+ ++ LCK+ + +I M E G +P+ TYN+L+ C +
Sbjct: 285 MMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNK 344
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ R + M KG + N+ +Y+I+I+G I EA L +E +GL + ++
Sbjct: 345 VFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNT 404
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
I GLCQ G +A EL K M + SP V +LL S+ KL +++ +
Sbjct: 405 LISGLCQAGRHCEARELFKDMQAQGCSPDL-VTCTILLDSLCKLGYLDNAL 454
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL N M P IV + +L+ ++ + Y L + +L + DV+ +N+ I
Sbjct: 67 DALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILI 126
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N + V+ ++ + +LG +PD +T+++L+ LC + R E EM G
Sbjct: 127 NCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQ 186
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
NL TY+ +I G G A GLL++ G +++ I GLC+ LV +AL++
Sbjct: 187 PNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDI 246
Query: 404 LKQMADKDVSPGARVWEALL 423
++ K V P + L+
Sbjct: 247 FSEIKGKGVRPDVFTYSILM 266
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 37/212 (17%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + N M++ D T ++++ +C++ LS E G ++ M + G Y ++
Sbjct: 278 ASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLS--EAQGIIKIMIEKGVEPNYATYNSL 335
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + KVF+A + + M + G P++V Y +++NG + +A ELFDE+ GL
Sbjct: 336 MNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL 395
Query: 273 VPDVYTYNVYINGLC-----------------------------------KQNNVEAGIK 297
+P+ + YN I+GLC K ++ ++
Sbjct: 396 IPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALR 455
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ M++ KP+++TY+ L++A+ K ++ R
Sbjct: 456 LFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 144/277 (51%), Gaps = 2/277 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI++ N MI + D T ++++++ C+ + + + M K G V Y ++
Sbjct: 279 AIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV--FDMMMKQGIKPNFVTYNSL 336
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ ++V A I N M G+ PDI Y++++NG + + +A LF E+ +
Sbjct: 337 MDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDV TY+ I+GL K + ++++ M + G P++ TYN++L ALCK ++++
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIA 456
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ + K KG ++ TYSI+I GL G + +A + E+ L KG + I G C
Sbjct: 457 LLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFC 516
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
GL +AL LL +M D P A+ +E ++LS K
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 121/218 (55%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I S+ K + V +A + ++M S GI PD+V Y+ +++G + A +LF+
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFN 284
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++++ + PDVYT+N+ +N CK ++ G + M + G KP+ +TYN+L+ C V+
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+N+ + + M G+ ++Q+YSIMI+G EA L +E K + +
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GL + G + AL+L+ QM D+ V P + ++L
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSIL 442
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 150/301 (49%), Gaps = 15/301 (4%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL-NCMINDGFCVDGKTC-SLILSSV 179
LI + + +D+++LF K+ I + IL N DG +GKT +++
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 180 CEQRDLSSDELL-GF--VQEMKKLGFCFGMV----------DYTNVIRSLVKKEKVFDAL 226
+ ++ + L+ G+ V+E+ K F + Y+ +I K +K +A+
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ +M I PD+V Y+ +++G+ A +L D++ G+ P++ TYN ++ L
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDAL 445
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK + V+ I ++ ++ G +PD+ TY+ L++ LC+ +L R++ +++ KG L++
Sbjct: 446 CKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDV 505
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
Y+IMI G +G EA LL + + G + ++ I L ++ A +LL++
Sbjct: 506 YAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE 565
Query: 407 M 407
M
Sbjct: 566 M 566
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ V A I N M G D ++ S++++ C+ + DE + +EM + +
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF--DEAMNLFKEMHRKNIIPDV 400
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+++I L K ++ AL +++QM G+ P+I Y +L+ + KA L +
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTK 460
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
G PD+ TY++ I GLC+ +E K+ + G DV Y ++Q C
Sbjct: 461 FKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGL 520
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
N L+ +M+ G + + +TY I+I L K + A LL E + +GL
Sbjct: 521 FNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 9/230 (3%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
D + +N F KI KF A+ + M D T S ++ + + +S
Sbjct: 364 DIQSYSIMINGFCKIKKFDE-----AMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS- 417
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
L V +M G + Y +++ +L K +V A+ +L + K G +PDI Y+++
Sbjct: 418 -YALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSIL 476
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G+ A ++F++LLV G DVY Y + I G C + + +++ ME+ G
Sbjct: 477 IKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGC 536
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
PD TY ++ +L K E + +L++EM +G+ LN Y + + LA
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNF--YDLYLTRLA 584
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y++ + V DA+ + N++ P + +L ++ + Y L
Sbjct: 50 FISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQ 109
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P++ N+ IN C+ + + A + ++G PD IT+ TL + LC
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKG 169
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + ++ G + +Y +I GL G+ A LL+ + M++
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I +C+ LV +A +L +M K +SP + AL+
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALI 267
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
K + + Y+ D A LF+ LL P + +N + L K + +
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ ME G KP+++ N L+ C++ + + ++ G V + T++ + GL
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
KG I +A ++ + G + I GLC+ G R AL+LL+++ V P
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226
Query: 418 VWEALLLSSVSKLDFVNTSF 437
++ ++ S+ K+ VN +F
Sbjct: 227 MYNT-IIDSMCKVKLVNEAF 245
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 132/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + I+S C+ D+ E EM G ++ +T ++ K + DA + N
Sbjct: 811 TYTAIISGFCQIGDMV--EAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHN 868
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M G P++V YT +++G+ + D A EL E+ +GL P+++TYN +NGLCK
Sbjct: 869 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 928
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N+E +K++ E G D +TY TL+ A CK E+++ +E++ EM KG+ + T++
Sbjct: 929 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFN 988
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++++G G + + LL L KG+ ++ F+ + C R ++ A + K M +
Sbjct: 989 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSR 1048
Query: 411 DVSPGARVWEALL 423
V P + +E L+
Sbjct: 1049 GVEPDGKTYENLV 1061
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 2/230 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM G + YT ++ K+ + A +M S I PD++ YT +++G
Sbjct: 763 SEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 822
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
D V+A +LF E+L GL PD+ T+ +NG CK +++ ++ M + G P+V+TY
Sbjct: 823 GDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTY 882
Query: 315 NTLLQALCKVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
TL+ LCK +L+ EL+ EM WK G+ N+ TY+ +++GL G+I EA L+ E
Sbjct: 883 TTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 941
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + + + C+ G + KA E+L +M K + P + L+
Sbjct: 942 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLM 991
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 139/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI ++ A E + MI G D + ++ C++ D+ + F EM
Sbjct: 751 RICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAAS--KFFYEMHSRDITPD 808
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT +I + + +A + ++M G++PDI+ +T ++NG A + +
Sbjct: 809 VLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHN 868
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G P+V TY I+GLCK+ ++++ +++ M ++G +P++ TYN+++ LCK
Sbjct: 869 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 928
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +LV E + G+ + TY+ ++D G++ +A +L E L KGL F+
Sbjct: 929 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFN 988
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C G++ +LL M K ++P A + L+
Sbjct: 989 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 156/334 (46%), Gaps = 39/334 (11%)
Query: 94 SQFCDISSVLDHIEKRENFET-------PEFI-FIDLIKTYADAHRFQDSVNLFYKIPKF 145
S FC I D +E + F P+ I F +L+ Y A +D+ F
Sbjct: 817 SGFCQIG---DMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDA---------F 864
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCF 204
R++ N MI G + T + ++ +C++ DL S++ELL EM K+G
Sbjct: 865 RVH---------NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL---HEMWKIGLQP 912
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y +++ L K + +A+ ++ + ++ G+ D V YT +++ + KA+E+
Sbjct: 913 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+L GL P + T+NV +NG C +E G K++ M G P+ T+N L++ C
Sbjct: 973 TEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIR 1032
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L + K+M +G+ + +TY ++ G + ++ EA L +E KG S +
Sbjct: 1033 NNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTY 1092
Query: 385 DETICGLCQRGLVRKALELLKQM------ADKDV 412
I G +R +A E+ QM ADK++
Sbjct: 1093 SVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEI 1126
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 147/312 (47%), Gaps = 4/312 (1%)
Query: 114 TPEFI-FIDL-IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT 171
T F+ F DL + TY D ++F+++ + A ++ M+N G + +
Sbjct: 577 TESFVQFFDLLVYTYKDWGSDPRVFDVFFQV-LVEFGMLPEARKVFEKMLNYGLVLSVDS 635
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
C++ L+ + + + ++ ++ F +E ++G C+ + Y VI + + ++ +A +L
Sbjct: 636 CNVYLARLSKDCNKTATAIIVF-REFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLL 694
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M+ G PD++ Y+ V+NG + K +L +++ GL P+ YTY I LC+
Sbjct: 695 MELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICK 754
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ + + M G PD I Y TL+ CK ++ + EM + I ++ TY+
Sbjct: 755 LAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 814
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I G GD++EA L E L +GL F E + G C+ G ++ A + M
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874
Query: 412 VSPGARVWEALL 423
SP + L+
Sbjct: 875 CSPNVVTYTTLI 886
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 4/263 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A +L M G+ D + S +++ C +L D++ +++MK+ G
Sbjct: 681 QLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGEL--DKVWKLIEKMKQKGLKPN 738
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y ++I L + K+ +A ++M GI PD + YT +++G + D A + F
Sbjct: 739 SYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFY 798
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNN-VEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PDV TY I+G C+ + VEAG K+ M G +PD+IT+ L+ CK
Sbjct: 799 EMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMLCRGLEPDIITFTELMNGYCKA 857
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ + M G N+ TY+ +IDGL +GD+ A LL E GL +
Sbjct: 858 GHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 917
Query: 385 DETICGLCQRGLVRKALELLKQM 407
+ + GLC+ G + +A++L+ +
Sbjct: 918 NSIVNGLCKSGNIEEAVKLVGEF 940
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 87/202 (43%), Gaps = 2/202 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++++ G D T + ++ + C+ ++ D+ + EM G +V + +
Sbjct: 933 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM--DKAQEILTEMLGKGLQPTIVTFNVL 990
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + D +LN M + GI P+ + ++ ++ + A ++ ++ G+
Sbjct: 991 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGV 1050
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY + G C N++ + M+ G V TY+ L++ K ++ RE
Sbjct: 1051 EPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEARE 1110
Query: 333 LVKEMKWKGIVLNLQTYSIMID 354
+ +M+ G+ + + + D
Sbjct: 1111 IFDQMRRDGLAADKEIFDFFSD 1132
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 145/286 (50%), Gaps = 24/286 (8%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
F++N+V + +LN G C G+T C++ L + E R D
Sbjct: 166 FQMNQVSYG-TLLN-----GLCKIGETRCAVKLLRMIEDRSTRPD--------------- 204
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y+ +I L K + V A ++M + GI P+++ Y+ ++ G + + A L
Sbjct: 205 --VVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSL 262
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+E+++ + P+VYTYN+ I+ LCK+ V+ K++A M G DV+TYN++L LCK
Sbjct: 263 LNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCK 322
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ L++ L +MK GI N TY+ +IDGL G + A L + L KG C
Sbjct: 323 SQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRT 382
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++ I GLC+ G+ KAL + +M D P A ++ ++ S K
Sbjct: 383 YNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEK 428
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 125/272 (45%), Gaps = 37/272 (13%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN---------------- 249
++++ ++ LVK + A+ + QM+ GI+P++V +++N
Sbjct: 65 IIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLG 124
Query: 250 -------------------GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
G+ ++ + ++ D+++ G + +Y +NGLCK
Sbjct: 125 KILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 184
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+K++ +E+ ++PDV+ Y+T++ LCK + +N+ + EM +GI N+ TYS
Sbjct: 185 ETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYS 244
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I G G ++ A LL E + K + ++ I LC+ G V++A +LL +M K
Sbjct: 245 TLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHK 304
Query: 411 DVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
+ ++L L LD F+++
Sbjct: 305 GQPADVVTYNSVLDGLCKSQNLDKATALFMKM 336
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 104/191 (54%), Gaps = 2/191 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +LN MI + T ++++ ++C++ + + L + EM G +V Y +V
Sbjct: 259 AFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKL--LAEMHHKGQPADVVTYNSV 316
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + + A + +MK GI+P+ YT +++G+ A++LF LLV G
Sbjct: 317 LDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGC 376
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
DV TYNV I+GLCK+ + + M + ME+ G P+ +T++ ++++L + E ++ +
Sbjct: 377 CIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEK 436
Query: 333 LVKEMKWKGIV 343
L+ M KG++
Sbjct: 437 LLHGMIAKGLL 447
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I +L K+ KV +A +L +M G D+V Y VL+G+ ++ KA LF ++
Sbjct: 278 YNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMK 337
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P+ YTY I+GLCK ++ K+ + G DV TYN ++ LCK +
Sbjct: 338 KWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFD 397
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ + +M+ G + N T+ I+I L K + +A LL + KGL
Sbjct: 398 KALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P I+ + +L ++ + Y A L ++ V G+ P++ T N+ IN C + +
Sbjct: 63 PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ + +LG +PD IT NTL++ LC E+ R ++ +G +N +Y +++GL
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G+ A LL ++ M+ I GLC+ +V +A + +M + + P
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVIT 242
Query: 419 WEALL 423
+ L+
Sbjct: 243 YSTLI 247
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 165/367 (44%), Gaps = 24/367 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S P Y+ VI L S+ + L H FE +F + +I Y
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECL-HKMVNGGFEPNDFTYNSIIDGY 410
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAI-EILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
D+ N K F+ GF E C + +GFC DG
Sbjct: 411 CKKGMVVDA-NRILKDAVFK----GFKPDEFTYCSLVNGFCQDG---------------- 449
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D+ + ++ G ++ Y +I+ L ++ + AL ++N+M G KPDI Y
Sbjct: 450 DPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYN 509
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++NG+ A L + + G +PD++TYN ++G C+Q +++ I+++ M
Sbjct: 510 LIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQ 569
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G PDVITYNTLL LCK + + E+ K M KG N+ TY+ +I+ L + + EA
Sbjct: 570 GMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEA 629
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK-DVSPGARVWEALLL 424
LL E +KGL F I G C+ G + A L + M + DVS + ++
Sbjct: 630 VDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIIS 689
Query: 425 SSVSKLD 431
+ +L+
Sbjct: 690 AFSEQLN 696
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 176/361 (48%), Gaps = 23/361 (6%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETP--EFIFIDLIKTYADAHRFQDSVNLF 139
Y +++ L + +F ++ ++L E R N + E ++++ ++ Y + Q++V+ F
Sbjct: 121 TYKSMLQKLGFHGKFNEMENLLS--EMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTF 178
Query: 140 YKIPKFRINRVGFAIE-ILNCMINDGFC----------------VDGKTCSLILSSVCEQ 182
++ F + ++ I+N ++ G+ D T ++ + S C
Sbjct: 179 ERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFC-- 236
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
R L ++ M LG V Y V+ + A + ++M + PD+
Sbjct: 237 RTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVT 296
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+ +++ + + +++E LFD++L G+ P+++T+N++I GLCK+ +++ ++++ C+
Sbjct: 297 TFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCV 356
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G +PDV+TYNT++ LC+ + E + +M G N TY+ +IDG KG +
Sbjct: 357 SREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMV 416
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
++A +L++A+ KG + + G CQ G +A+ + K K + P V+ L
Sbjct: 417 VDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTL 476
Query: 423 L 423
+
Sbjct: 477 I 477
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 168/360 (46%), Gaps = 26/360 (7%)
Query: 73 IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRF 132
++NC+P +Y+ ++ L E F V + K + E+ + + IK++ R
Sbjct: 183 LFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM-KDKKVESDVYTYTIRIKSFCRTGRP 241
Query: 133 QDSVNLFYKIPKFRINRVGFAIEILNCMIND-GFCVDGKTCSLILSSVCEQRDLSSDELL 191
++ L +P +L C N +C +++ E D +D
Sbjct: 242 YAALRLLRNMP------------VLGCFSNAVAYCT-------VVTGFYEFGD--NDRAR 280
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
EM + C + + ++ +L KK V ++ + +++ G+ P++ + + + G+
Sbjct: 281 ELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ +A L + GL PDV TYN I GLC+++ V + + M G +P+
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPND 400
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
TYN+++ CK + ++K+ +KG + TY +++G GD +A + ++
Sbjct: 401 FTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE-ALLLSSVSKL 430
L KGL +++ I GLCQ+GL+ AL+L+ +MA+K P +W L+++ + K+
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPD--IWTYNLIINGLCKM 518
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 40/299 (13%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A++++N M G D T +LI++ +C+ LS ++ L+G + G + Y
Sbjct: 489 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIG---DAITKGCIPDIFTYNT 545
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ ++ K+ A+ ++N+M S G+ PD++ Y +LNG+ + E+F + G
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P++ TYN I LC V + ++ M+ G PDV+++ TL+ CKV +L+
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAY 665
Query: 332 ELVK------------------------------------EMKWKGIVLNLQTYSIMIDG 355
L + EMK G + TY ++IDG
Sbjct: 666 GLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDG 725
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G++ + L E + KG + F + LC V++A+ ++ M KD+ P
Sbjct: 726 FCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVP 784
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%), Gaps = 5/173 (2%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM-KKLGFCFGMV 207
+V A+++L M + G D + +++ C+ DL D G + M K+
Sbjct: 625 KVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDL--DGAYGLFRGMEKQYDVSHTTA 682
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + ++ + AL + ++MK +G PD Y ++++G + + + E
Sbjct: 683 TYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLEN 742
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ G +P + T+ +N LC ++ V+ + +I M + PD T NT+ +A
Sbjct: 743 IEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFEA 793
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 145/263 (55%), Gaps = 4/263 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ V A ++ MI++G D TC+ +L+ +CE L ++ L + +K
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKL--EKALEMFKVFQKSKMDLD 300
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE-DYVKAEELF 264
+I + K KV +A + N + +G++ D+V Y +++ GV V+E ++++AE+++
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILI-GVFVKEGNFLRAEDIY 359
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+L G++P TYN ++G CKQN +E +M+ M G PDV+T++TL++ CK
Sbjct: 360 LEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKA 419
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ EL EM +G+V + TY+ +I G GD+ A + EE ++ G+C + F
Sbjct: 420 GRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITF 479
Query: 385 DETICGLCQRGLVRKALELLKQM 407
+ GLC + ++K L +L+ +
Sbjct: 480 RSMLAGLCTKAELQKGLTMLEDL 502
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 15/276 (5%)
Query: 160 MINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M+ G + T + +++ +C E R L + L V M + G V Y ++ + K
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQA---LALVDRMVEEGHQPDAVTYGTIVNGMCK 57
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
AL +L +M IK ++V Y+ +++ + +++KA+ +F E+ G+ P+V T
Sbjct: 58 LGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLT 117
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I+G C +++ M E PDV+T++ L+ A K +++ EL +EM
Sbjct: 118 YNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREML 177
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG----LCTQSSMFD-------ET 387
+ I TYS MIDG + +A + + ++KG + T +++ D
Sbjct: 178 RRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G CQ G V A +L ++M VSP LL
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLL 273
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 168/403 (41%), Gaps = 33/403 (8%)
Query: 31 QTLDQQQAKQNV--KQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIK 88
+ +D+ Q K NV ++ K I Q + + +H I+ P Y+ +I
Sbjct: 69 RKMDESQIKANVVIYSAIVDRLCKDGNHIKAQN--IFTEMHEKGIF---PNVLTYNCMID 123
Query: 89 TLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRI 147
++ D +L D IE+ N + F LI + + + L+ ++ + I
Sbjct: 124 GYCSYGKWSDAEQLLRDMIER--NIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNI 181
Query: 148 NRVGFAIEILNCMINDGFCVDGK------TCSLILSSVCEQRDLSSDELL-GFVQEMKKL 200
F I + DGFC + L++S C ++ + L+ G + + L
Sbjct: 182 ----FPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
F V NV + L + +M S+G+ PDIV +L G+ KA
Sbjct: 238 IHGFCQVGNVNVAQDLFQ------------EMISNGVSPDIVTCNTLLAGLCENGKLEKA 285
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
E+F + D T N+ ING+CK N V+ + + G + DV+TYN L+
Sbjct: 286 LEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGV 345
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
K R ++ EM KGI+ + TY+ M+DG + + EA +++ +++G
Sbjct: 346 FVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPD 405
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F I G C+ G V LEL +M + + + AL+
Sbjct: 406 VVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALI 448
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 156/368 (42%), Gaps = 14/368 (3%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL N +P + +I + + + + +R F T + +I +
Sbjct: 137 LLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTT-ITYSSMIDGF 195
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEI--LNCMINDGFCVDGKTCSLILSSVCEQRD 184
R +D+ ++F +++ G + +I LN +I DG C + ++ C+ +
Sbjct: 196 CKHSRLEDAKHMF----DLMVSK-GCSPDIITLNTLI-DGCC---RAKRHLIHGFCQVGN 246
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
++ + L QEM G +V ++ L + K+ AL + + + D
Sbjct: 247 VNVAQDL--FQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATC 304
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++NG+ +A +LF+ L V G+ DV TYN+ I K+ N + M
Sbjct: 305 NIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLC 364
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G P +TYN+++ CK L R++V M +G ++ T+S +I G G + +
Sbjct: 365 KGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDD 424
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
L E +GL + ++ I G C+ G + A ++ ++M V P + ++L
Sbjct: 425 GLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLA 484
Query: 425 SSVSKLDF 432
+K +
Sbjct: 485 GLCTKAEL 492
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 16/266 (6%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM + G ++ Y +I K DA +L M I PD+V ++ ++N + +
Sbjct: 105 EMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEG 164
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
AEEL+ E+L + P TY+ I+G CK + +E M M G PD+IT N
Sbjct: 165 KVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLN 224
Query: 316 TLL-----------QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
TL+ C+V +N ++L +EM G+ ++ T + ++ GL G + +
Sbjct: 225 TLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEK 284
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A + + + ++ + I G+C+ V +A +L + V + L+
Sbjct: 285 ALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIG 344
Query: 425 SSVSKLDFVNTSFIRLVDQILNTPCK 450
V + +F+R D L CK
Sbjct: 345 VFVKE-----GNFLRAEDIYLEMLCK 365
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM G V Y +++ K+ ++ +A +++ M S+G PD+V ++ ++ G
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
ELF E+ GLV D TYN I+G CK ++ + M G PD IT+
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFR 480
Query: 316 TLLQALCKVRELNRLRELVKEMK 338
++L LC EL + ++++++
Sbjct: 481 SMLAGLCTKAELQKGLTMLEDLQ 503
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 183/388 (47%), Gaps = 26/388 (6%)
Query: 57 IPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE 116
I +PH+ LL S C+ P AY V++ L + D + D + +R+ F P+
Sbjct: 57 ITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVF--PD 114
Query: 117 F-IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
F +++ +S L K+ K G V+ TC++
Sbjct: 115 VATFNNVLHALCQKGDIMESGALLAKVLK------------------RGMSVNKFTCNIW 156
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ +CE L +E + V+ M +V Y ++R L K KV +A L +M +
Sbjct: 157 IRGLCEGGRL--EEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQ 213
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G PD Y +++G ++ +A EL + + G VPD TY INGLC + +VE
Sbjct: 214 GCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERA 273
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+++ + KPD++ YN+L++ LC+ + +++ EM G ++ TY+I+I+G
Sbjct: 274 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVING 333
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L G+I +A ++ +A+ KG F+ I G C+R + AL+L+++M ++P
Sbjct: 334 LCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPD 393
Query: 416 ARVWEALL--LSSVSKLDFVNTSFIRLV 441
A + ++L L K VN +F ++
Sbjct: 394 AITYNSVLNGLCKAGKAKEVNETFEEMI 421
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 146/281 (51%), Gaps = 4/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E+L I GF D T CSLI + +C + D+ + L E + +V Y +
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLI-NGLCAEGDV--ERALELFNEAQAKDLKPDLVVYNS 294
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+++ L ++ + AL ++N+M DG PDI Y +V+NG+ + A + ++ +V G
Sbjct: 295 LVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKG 354
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+PDV+T+N I+G CK+ +++ ++++ M G PD ITYN++L LCK + +
Sbjct: 355 YLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVN 414
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E +EM KG N TY+I+I+ + EA G++ GL + F+ I G
Sbjct: 415 ETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGF 474
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
C+ G + A L +++ +K S A + L+ + SKL+
Sbjct: 475 CRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNM 515
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 150/306 (49%), Gaps = 13/306 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++++N M+ DG D T +++++ +C+ ++S ++ + + G+ + + +
Sbjct: 308 ALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVV--MNDAIVKGYLPDVFTFNTM 365
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ K+ AL ++ +M GI PD + Y VLNG+ + E F+E+++ G
Sbjct: 366 IDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGC 425
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN+ I CK N +E +I M + G PD I++NTL+ C+ +L+
Sbjct: 426 RPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYL 485
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +++ KG T++I+I +SK ++ A + E ++KG + + G C
Sbjct: 486 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSC 545
Query: 393 QRGLVRKALELLKQMADKDVSPG----ARVWEALLLSS-VSKLDFVNTSFIRL------V 441
+ V +A L +M K P RV +L ++ VS+ + +R+ V
Sbjct: 546 KAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV 605
Query: 442 DQILNT 447
D IL+T
Sbjct: 606 DTILST 611
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 7/211 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+IN++ A ++ M DG D + + ++ C DL LL Q++ + G+
Sbjct: 441 KINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLL--FQKLDEKGYSAT 498
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +I + K + A I +M S G KPD+ Y ++++G + +A
Sbjct: 499 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLA 558
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G VP + T+ +N L + V + +I M +G P+V+ +T+L +
Sbjct: 559 EMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILST--DKK 614
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
E+ + LV+E+ KG + + TY ++ +G+
Sbjct: 615 EIAAPKILVEELMKKGHI-SYPTYEVLHEGV 644
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 63/145 (43%)
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ G P YN ++ L + K+ M G PD T+ +++ C +
Sbjct: 3 LFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPH 62
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L++ + +G + Y ++ GL + G +A L +E L + + + F+ +
Sbjct: 63 VALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVL 122
Query: 389 CGLCQRGLVRKALELLKQMADKDVS 413
LCQ+G + ++ LL ++ + +S
Sbjct: 123 HALCQKGDIMESGALLAKVLKRGMS 147
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 142/271 (52%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + M +G + T + I+ S+C+ R + ++ + F+ EM G + Y ++
Sbjct: 217 AVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLV--NDAMDFLSEMVGRGIPPDAITYNSI 274
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L ++ +A + +M+ +G KPD+V Y ++++ + A + E++ G+
Sbjct: 275 VHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGI 334
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY ++GLC + I++ ME+ G KPDV+ YNT++ +LCK R +N E
Sbjct: 335 PPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAME 394
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM +GI N TYS ++ G + G + EA L +E + + + + F + GLC
Sbjct: 395 FLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLC 454
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
Q G+V +A + + M +K V P + AL+
Sbjct: 455 QEGMVSEARWVFETMTEKGVEPNIYTYNALM 485
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 4/300 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+N V FA+ + M G D T + +++ VC + + + EM + G
Sbjct: 140 RLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVA--VELYNEMVRSGHEPD 197
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I L A+ + +M+ +G KP++V Y +++ + A +
Sbjct: 198 VISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLS 257
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G+ PD TYN ++GLC + ++ ME+ G KPDV+TYN ++ +L K R
Sbjct: 258 EMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDR 317
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N + + EM +GI ++ TY+ ++ GL G + EA L ++ KG ++
Sbjct: 318 LVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYN 377
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
I LC+ LV A+E L +M D+ + P A + +L ++ +LD F +V +
Sbjct: 378 TIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR 437
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 170/373 (45%), Gaps = 17/373 (4%)
Query: 90 LAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINR 149
L NS F I+S + +++ E F F+ ++ HR + + F K P
Sbjct: 3 LMRNSAFRAIASSAIWV-LQQHMEMGIFPFLPYFPSFLFFHRHHITTSTFTKNPSLPKKN 61
Query: 150 VGFAIEILNCM-INDGFCVDGKTCSL-----------ILSSVCEQRDLSSDELLGFVQEM 197
GFA N + ++D + + L S+ + + S+ ++ +M
Sbjct: 62 GGFASNSSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYST--VVYLCNQM 119
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
G + +I L + V A+ + +M GI+PD++ +T ++NGV +
Sbjct: 120 DLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKI 179
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
A EL++E++ G PDV +YN INGLC N + + ME+ G KP+V+TYNT+
Sbjct: 180 KVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTI 239
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ +LCK R +N + + EM +GI + TY+ ++ GL G + EA L + G
Sbjct: 240 IDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGC 299
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I L + LV A + L +M D+ + P + +L + L +N +
Sbjct: 300 KPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT-ILHGLCYLGQLNEA- 357
Query: 438 IRLVDQILNTPCK 450
IRL ++ CK
Sbjct: 358 IRLFKKMEQKGCK 370
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++ L+ M+ G D T + I+ +C L +E + M++ G +V Y +
Sbjct: 252 AMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQL--NEATRLFKRMEQNGCKPDVVTYNII 309
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K V DA L++M GI PD+V YT +L+G+ +A LF ++ G
Sbjct: 310 IDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGC 369
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV YN I+ LCK V ++ ++ M + G P+ +TY+T+L C + +L+ +
Sbjct: 370 KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQ 429
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L KEM + ++ N T+SI++DGL +G + EA + E KG+ ++ + G C
Sbjct: 430 LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYC 489
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
R + +A ++ + M K +P + L+
Sbjct: 490 LRCKMNEARKVFEIMVGKGCAPDLHSYNILI 520
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 139/271 (51%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + L+ M++ G D T + IL +C L +E + ++M++ G +V Y +
Sbjct: 322 AADFLSEMVDQGIPPDVVTYTTILHGLCYLGQL--NEAIRLFKKMEQKGCKPDVVAYNTI 379
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K V DA+ L++M GI P+ V Y+ +L+G +A +LF E++ +
Sbjct: 380 IDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNV 439
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P+ T+++ ++GLC++ V + M E G +P++ TYN L+ C ++N R+
Sbjct: 440 MPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARK 499
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ + M KG +L +Y+I+I+G + + +A LL + K L + ++ + GLC
Sbjct: 500 VFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLC 559
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + A EL K+M + P + LL
Sbjct: 560 YVGRLLDAQELFKKMCSSGMLPTLMTYSILL 590
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E L+ M++ G + T S IL C L DE +EM + ++ +
Sbjct: 392 AMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQL--DEATQLFKEMVGRNVMPNTLTFSIL 449
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L ++ V +A + M G++P+I Y ++NG ++ +A ++F+ ++ G
Sbjct: 450 VDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGC 509
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+++YN+ ING C ++ ++ M P+ +TYNT+++ LC V L +E
Sbjct: 510 APDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQE 569
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K+M G++ L TYSI+++GL G + EA L + K L ++ I G+
Sbjct: 570 LFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMF 629
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + A L +++ + P R + ++
Sbjct: 630 IGGKLEVAKGLFSKLSADGIQPPGRTYNVMI 660
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ M+ G D + +++++ C R + + L +KKL V Y +
Sbjct: 497 ARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL--TPNTVTYNTI 554
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
++ L ++ DA + +M S G+ P ++ Y+++LNG+ +A +LF + L
Sbjct: 555 MKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ Y + I G+ +E + + + G +P TYN +++ L K + E
Sbjct: 615 EPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYE 674
Query: 333 LVKEMKWK 340
L + KWK
Sbjct: 675 LFR--KWK 680
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 153/288 (53%), Gaps = 4/288 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+I+ V A E+L + GF D T CSLI + +C + D+ + L E + G
Sbjct: 305 KISMVQEATELLKDAVFKGFVPDQVTYCSLI-NGLCAEGDV--ERALELFNEAQAKGIKP 361
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y ++++ L + + AL ++N+M +G PDI Y +V+NG+ + A +
Sbjct: 362 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 421
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ ++ G +PDV+T+N I+G CK+ +++ ++++ M E G PD ITYN++L LCK
Sbjct: 422 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 481
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++N + E +EM KG N TY+I+I+ + EA ++ + +GL + F
Sbjct: 482 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 541
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ I G C+ G + A L +++ +K S A + L+ + KL+
Sbjct: 542 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNM 589
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 149/288 (51%), Gaps = 5/288 (1%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L +I G ++ T ++ + +CE L E + V M+ +V Y +IR
Sbjct: 211 LLGKVIQRGMSINLFTYNIWIRGLCEAGRLP--EAVRLVDGMRAYAVP-DVVTYNTLIRG 267
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L KK +A+ L +M + G PD Y +++G +A EL + + G VPD
Sbjct: 268 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 327
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TY INGLC + +VE +++ + G KPD++ YN+L++ LC + +++
Sbjct: 328 QVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMN 387
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM +G ++QTY+I+I+GL G+I +A ++ +A+ KG F+ I G C+R
Sbjct: 388 EMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRL 447
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
+ AL+L+++M + ++P + ++L L K++ VN +F ++
Sbjct: 448 KLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 181/416 (43%), Gaps = 60/416 (14%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
AY +I+ LA + + + + R + T +++ I+ YA A R +D+V+ F +
Sbjct: 19 AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 78
Query: 142 IPKFRINRVGFAIE-ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+ F A I++ +++ + + + + DL + ++
Sbjct: 79 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHT-------HTIRLR 131
Query: 201 GFCF-----------------GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
FC G V Y V+ L DA + +QM + P++
Sbjct: 132 SFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAA 191
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGL------------------------------- 272
+ VL+ + + D ++A L +++ G+
Sbjct: 192 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR 251
Query: 273 ---VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
VPDV TYN I GLCK++ + + + M G PD TYNT++ CK+ +
Sbjct: 252 AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQE 311
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL+K+ +KG V + TY +I+GL ++GD+ A L EA KG+ +++ +
Sbjct: 312 ATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVK 371
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
GLC +GL+ AL+++ +MA++ P + + ++++ + K+ ++ + + + D I+
Sbjct: 372 GLCLQGLILHALQVMNEMAEEGCHPDIQTYN-IVINGLCKMGNISDATVVMNDAIM 426
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 145/297 (48%), Gaps = 3/297 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++++N M +G D +T +++++ +C+ ++S ++ MK G+ + + +
Sbjct: 382 ALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK--GYLPDVFTFNTL 439
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ K+ AL ++ +M GI PD + Y VLNG+ + E F E+++ G
Sbjct: 440 IDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGC 499
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN+ I C+ N +E K+I M + G PD +++NTL+ C+ +L
Sbjct: 500 HPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYL 559
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++++ KG T++ +I + K ++ A + +E L+KG S + I G C
Sbjct: 560 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 619
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS-SVSKLDFVNTSFIRLVDQILNTP 448
+ V +A L +M K P + ++ S +V+ F I ++ +I P
Sbjct: 620 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +++ M G Y +I K V +A +L G PD V Y ++
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 335
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG+ + D +A ELF+E G+ PD+ YN + GLC Q + ++++ M E G
Sbjct: 336 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 395
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD+ TYN ++ LCK+ ++ ++ + KG + ++ T++ +IDG + + A L
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+E G+ + ++ + GLC+ G V + E ++M K P + L+
Sbjct: 456 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILI 510
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 20/185 (10%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P P Y+ +I+ +++ + S V+ + + E F LI + +
Sbjct: 498 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ-EGLHPDAVSFNTLIYGFCRNGDLEG 556
Query: 135 SVNLFYKIPKFRINRVG-----------------FAIEILNCMINDGFCVDGKTCSLILS 177
+ LF K+ + + A +I + M++ G D T +++
Sbjct: 557 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 616
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
C+ ++ D + EM K GF M + VI SL +VF A+GI++ M G+
Sbjct: 617 GSCKTANV--DRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGV 674
Query: 238 KPDIV 242
P++V
Sbjct: 675 VPEVV 679
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 125/242 (51%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +++EM++ G V YT VI + + +AL + ++M + G PD+V Y +
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL 375
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG+ + AEEL +E+ G+ PD+ T+ I+G C+ N+E ++ + +
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD++TYNTL+ +C+ +L + EL +M + I N TYSI+ID KG + A
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFA 495
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L+E +NKG+ ++ I G C+ G V K + L +M V P + L+ V
Sbjct: 496 FLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYV 555
Query: 428 SK 429
+
Sbjct: 556 KE 557
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 177/386 (45%), Gaps = 23/386 (5%)
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
PH+ + N E + ++ + + QF ++ +V+ +EKR F P+ +
Sbjct: 140 PHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVF--PDVVTH 197
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+++ DA +FR V A+ +++ M++ G T + +L +
Sbjct: 198 NVM---VDA--------------RFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLL 240
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
R+ D+ + M G + + +I + ++ +AL +M+ + PD
Sbjct: 241 --RNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPD 298
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+V ++ ++ + + A E E+ GL+PD Y + I G C+ + +++
Sbjct: 299 VVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRD 358
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M G PDV+TYNTLL LCK R L+ EL+ EMK +G+ +L T++ +I G G
Sbjct: 359 EMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDG 418
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+I +A + ++ L ++ I G+C++G + KA EL M +++ P +
Sbjct: 419 NIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYS 478
Query: 421 ALLLSSVSKLDFVNTSFIRLVDQILN 446
L+ S K V+ +F +D+++N
Sbjct: 479 ILIDSHCEKGQ-VDNAFA-FLDEMVN 502
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 144/282 (51%), Gaps = 5/282 (1%)
Query: 149 RVGFAIEILNC---MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R G +E L M+ G D T + +L+ +C++R LS E L + EMK+ G
Sbjct: 346 RAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEEL--LNEMKERGVPPD 403
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I + + AL + + ++PDIV Y +++G+ Q D KA EL+D
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD 463
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + P+ TY++ I+ C++ V+ + M G P+++TYN++++ C+
Sbjct: 464 DMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSG 523
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ ++ + +M+ ++ +L TY+ +I G +G + EA LL+ N+ + + ++
Sbjct: 524 NVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYN 583
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
I G G +++A + K+M + + P + +++ V
Sbjct: 584 MIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHV 625
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + A E L M G DG ++++ C + E L EM G
Sbjct: 311 RRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLML--EALRVRDEMVAFGCLPD 368
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ L K+ ++ DA +LN+MK G+ PD+ +T +++G + KA + FD
Sbjct: 369 VVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFD 428
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ L PD+ TYN I+G+C+Q ++ ++ M P+ +TY+ L+ + C+
Sbjct: 429 TISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKG 488
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ + EM KGIV N+ TY+ +I G G++ + L + + + ++
Sbjct: 489 QVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYN 548
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G + +A LLK M +++V P A + ++
Sbjct: 549 TLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMII 586
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A L+ M+N G + T + I+ C ++S + F+ +M+ ++ Y +
Sbjct: 493 AFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQ--FLPKMRHDKVMPDLITYNTL 550
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I VK+ K+ +A +L M+++ ++PD V Y M+++G V + +A+ ++ ++ G+
Sbjct: 551 IHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGI 610
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
PD YTY ING N + ++ M + G PD
Sbjct: 611 EPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 141/279 (50%), Gaps = 3/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R A +L M GFC+D TC++++ + C Q + + + M ++G
Sbjct: 193 REGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRN--VTDLFRRMSEMGTPPN 250
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
MV+Y+ I L ++ V A +L +M G+KP++ +T +++G+ +A LF
Sbjct: 251 MVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFL 310
Query: 266 ELL-VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+L+ P+V+TY V I G CK+ + ++ M E G P+ TY TL+ CK
Sbjct: 311 KLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKG 370
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+R EL+ +MK +G + N+ TY+ +I G KG I EA +L A ++GL +
Sbjct: 371 GSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTY 430
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I C++G + AL+L KQMA+K P + ++
Sbjct: 431 TILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTII 469
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 158/347 (45%), Gaps = 21/347 (6%)
Query: 122 LIKTYADAHRFQDSVNLFYKI-----PKFRINRVGF------------AIEILNCMINDG 164
+++ + RF++ +LF ++ P +N + A +L M+ G
Sbjct: 222 VVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKG 281
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
+ T + ++ +C+ + L F++ +K + + YT +I K+ K+
Sbjct: 282 LKPNVYTHTSLIDGLCKIGWMERAFRL-FLKLVKSSSYKPNVHTYTVMIGGYCKEGKLAR 340
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L +M G+ P+ YT +++G + +A EL +++ + G +P++YTYN I
Sbjct: 341 AEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIG 400
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G CK+ ++ K++ G D +TY L+ CK + +L K+M K
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHP 460
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
++ TY+ +I + + ++ L ++ L+ GL + I G C+ G + AL++
Sbjct: 461 DIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVF 520
Query: 405 KQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPC 449
++M P + + AL+ L S+L+ F ++D+ L PC
Sbjct: 521 ERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHL-VPC 566
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 4/207 (1%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLN-GVIVQEDYVKAEELFDELL--VLGLVPDVY 277
++ +A +L +++S G+ + VL G+ + A E FD + G+ PD
Sbjct: 123 RLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHR 182
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
++ + G C++ E ++A M G D T +++A C+ + +L + M
Sbjct: 183 SFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRM 242
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
G N+ YS IDGL +G + +A +LEE + KGL I GLC+ G +
Sbjct: 243 SEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWM 302
Query: 398 RKALEL-LKQMADKDVSPGARVWEALL 423
+A L LK + P + ++
Sbjct: 303 ERAFRLFLKLVKSSSYKPNVHTYTVMI 329
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 104/278 (37%), Gaps = 54/278 (19%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-------GFCFG 205
A E++N M +GF + T + I+ C++ G +QE K+ G
Sbjct: 376 AFELMNKMKLEGFLPNIYTYNAIIGGFCKK---------GKIQEAYKVLRMATSQGLHLD 426
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT +I K+ + AL + QM PDI YT ++ Q ++++LFD
Sbjct: 427 KVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFD 486
Query: 266 ELLVLGLVP-----------------------------------DVYTYNVYINGLCKQN 290
+ L +GLVP D TY I+ LCK++
Sbjct: 487 KCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKES 546
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+E + M + P +T TL C+ ++ + + + T
Sbjct: 547 RLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQ---QAHTAD 603
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ L++ G++ A L+ L+K + + I
Sbjct: 604 ALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFI 641
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 169/339 (49%), Gaps = 22/339 (6%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
+ +I L +QF +L+ + K+E+ E E +F+ + + Y HR D++ +F+K
Sbjct: 52 TFGAMIHRLVSVNQFRPAEGMLERM-KQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHK 110
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ F++ K+ + + E+ + +GF +EM++ G
Sbjct: 111 MEDFQVKPTQ------------------KSYLTVFDILVEENHVK--RAIGFYKEMREKG 150
Query: 202 FCFGMVDYTNVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
+V +I++L K E+ + A + +M + G +PD Y ++NG+ +A
Sbjct: 151 IPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQA 210
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+EL DE+ GL P V +Y I+GLC+ NN++ I+++ M G +P+V TY++L+
Sbjct: 211 KELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDG 270
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK ++ EL++ M + ++ N+ TYS +I+GL +G EA +L+ +GL
Sbjct: 271 LCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPD 330
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ M+ I GLC ++A + +MA +SP W
Sbjct: 331 AGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASW 369
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 144/331 (43%), Gaps = 51/331 (15%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
C+P Y +I L + + +LD +E E +P + + LI ++
Sbjct: 186 GCQPDSYTYGTLINGLCKLGKISQAKELLDEME--EKGLSPSVVSYTSLIHGLCQSNNLD 243
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+ AIE+L MI +G + T S ++ +C + S + +
Sbjct: 244 E------------------AIELLEEMIINGIEPNVFTYSSLMDGLC--KSGHSSQAMEL 283
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++ M + MV Y+ +I L K+ K +A+ IL++M+ G+KPD Y +++G+
Sbjct: 284 LEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCA 343
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+Y +A DE+ + G+ P+ ++ + +KM
Sbjct: 344 ACNYQEAANFIDEMALGGISPNRASWTFH-------------VKM--------------- 375
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
+N ++Q LC + R +L M+ +GI + + T+ ++ +GD+ +A +LEE +
Sbjct: 376 HNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMI 435
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELL 404
G M++ +CGL R VR+ ELL
Sbjct: 436 LDGCIPDEGMWNVLMCGLWDRKKVRETTELL 466
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 32/374 (8%)
Query: 85 FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN------- 137
FV+ +NS +SVL E R ++ +F L+ Y D+ F D++
Sbjct: 128 FVVSRKGKNSASSVFTSVL---EARGTHQS-NLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183
Query: 138 ------------LFYKIPKFRINRVGFAI--EILNCMINDGFCVDGKTCSLILSSVCEQR 183
LF ++ K + +A EIL+C G+ D ++++ +C++
Sbjct: 184 HNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC----GYPPDVCKFNVLMHRLCKEH 239
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
++ +LL E+ K G +V + +I K + + M + + PD+
Sbjct: 240 KINEAQLL--FGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFT 297
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y++++NG+ + A +LF E+ GLVP+ T+ ING C + G+++ M
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G KPDVITYNTL+ LCKV +L ++LV EM +G+ + TY+++IDG +GD+
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLE 417
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A + +E + +G+ + F I G C+ G V +A L++M + + P + ++
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477
Query: 424 LSSVSKLDFVNTSF 437
K D V T F
Sbjct: 478 HGFCKKGD-VKTGF 490
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 159/353 (45%), Gaps = 23/353 (6%)
Query: 73 IYNCEPPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAH 130
I +C PP+ ++ ++ L + + + + I KR F LI Y +
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKR-GLRPTVVSFNTLINGYCKSG 274
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
FR+ R F +E N + D F T S++++ +C++ L D+
Sbjct: 275 NLDQG---------FRLKR--FMME--NRVFPDVF-----TYSVLINGLCKEGQL--DDA 314
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
EM G V +T +I + + I QM G+KPD++ Y ++NG
Sbjct: 315 NKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLING 374
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ D +A++L E+ GL PD +TY + I+G CK+ ++E+ +++ M + G + D
Sbjct: 375 LCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+ + L+ C+ ++ ++EM GI + TY+++I G KGD+ LL+
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E G ++ + GLC++G ++ A LL M + V P + LL
Sbjct: 495 EMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 2/207 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R +EI M+ G D T + +++ +C+ DL + L V EM + G
Sbjct: 344 GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKL--VIEMTQRGLKPDKF 401
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + AL I +M +GI+ D V +T +++G + ++AE E+
Sbjct: 402 TYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM 461
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G+ PD TY + I+G CK+ +V+ G K++ M+ G P V+TYN LL LCK ++
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMID 354
L+ M G+V + TY+I+++
Sbjct: 522 KNANMLLDAMLNLGVVPDDITYNILLE 548
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 32/374 (8%)
Query: 85 FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN------- 137
FV+ +NS +SVL E R ++ +F L+ Y D+ F D++
Sbjct: 128 FVVSRKGKNSASSVFTSVL---EARGTHQS-NLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183
Query: 138 ------------LFYKIPKFRINRVGFAI--EILNCMINDGFCVDGKTCSLILSSVCEQR 183
LF ++ K + +A EIL+C G+ D ++++ +C++
Sbjct: 184 HNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC----GYPPDVCKFNVLMHRLCKEH 239
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
++ +LL E+ K G +V + +I K + + M + + PD+
Sbjct: 240 KINEAQLL--FGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFT 297
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y++++NG+ + A +LF E+ GLVP+ T+ ING C + G+++ M
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G KPDVITYNTL+ LCKV +L ++LV EM +G+ + TY+++IDG +GD+
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLE 417
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A + +E + +G+ + F I G C+ G V +A L++M + + P + ++
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477
Query: 424 LSSVSKLDFVNTSF 437
K D V T F
Sbjct: 478 HGFCKKGD-VKTGF 490
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 159/353 (45%), Gaps = 23/353 (6%)
Query: 73 IYNCEPPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAH 130
I +C PP+ ++ ++ L + + + + I KR F LI Y +
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKR-GLRPTVVSFNTLINGYCKSG 274
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
FR+ R F +E N + D F T S++++ +C++ L D+
Sbjct: 275 NLDQG---------FRLKR--FMME--NRVFPDVF-----TYSVLINGLCKEGQL--DDA 314
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
EM G V +T +I + + I QM G+KPD++ Y ++NG
Sbjct: 315 NKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLING 374
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ D +A++L E+ GL PD +TY + I+G CK+ ++E+ +++ M + G + D
Sbjct: 375 LCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+ + L+ C+ ++ ++EM GI + TY+++I G KGD+ LL+
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E G ++ + GLC++G ++ A LL M + V P + LL
Sbjct: 495 EMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 2/214 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R +EI M+ G D T + +++ +C+ DL + L V EM + G
Sbjct: 344 GRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKL--VIEMTQRGLKPDKF 401
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + AL I +M +GI+ D V +T +++G + ++AE E+
Sbjct: 402 TYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM 461
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G+ PD TY + I+G CK+ +V+ G K++ M+ G P V+TYN LL LCK ++
Sbjct: 462 LEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQM 521
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
L+ M G+V + TY+I+++G G+
Sbjct: 522 KNANMLLDAMLNLGVVPDDITYNILLEGHCKHGN 555
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 103/201 (51%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
Q+M + G ++ Y +I L K + +A ++ +M G+KPD YTM+++G +
Sbjct: 354 QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE 413
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
D A E+ E++ G+ D + I+G C++ V + + M E G KPD TY
Sbjct: 414 GDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATY 473
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
++ CK ++ +L+KEM+ G V + TY+++++GL +G + A LL+ LN
Sbjct: 474 TMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLN 533
Query: 375 KGLCTQSSMFDETICGLCQRG 395
G+ ++ + G C+ G
Sbjct: 534 LGVVPDDITYNILLEGHCKHG 554
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+EI M+ +G +D + ++S C + + E ++EM + G YT V
Sbjct: 419 ALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERT--LREMLEAGIKPDDATYTMV 476
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I KK V +L +M+ DG P +V Y ++LNG+ Q A L D +L LG+
Sbjct: 477 IHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL---LQALCKVRE 326
VPD TYN+ + G CK N E K+ E G D +Y +L L+ CK R+
Sbjct: 537 VPDDITYNILLEGHCKHGNREDFDKL---QSEKGLVQDYGSYTSLIGDLRKTCKERQ 590
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 147/275 (53%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+ +L M G +D + ++S C + DL++ L +EM+K G V
Sbjct: 337 QVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRL--FEEMQKRGLAADRVT 394
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+T +I L + ++ +A +L +M G+ D+V YT++++G + + V+A + +E++
Sbjct: 395 HTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMV 454
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ P+V TY +GLCKQ +V A +++ M G + +V TYN+L+ LCK L
Sbjct: 455 GRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLE 514
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ ++ EM+ G ++ TY+ +ID L G+ A +L+E L+KG+ + ++ +
Sbjct: 515 QAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLM 574
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C G V +LL+ M +K+V P + +L+
Sbjct: 575 NGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLM 609
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 135/265 (50%), Gaps = 4/265 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M G D T + +++ +C +L +D +L QEM G +V YT +I K
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVL---QEMVDKGLDVDVVTYTVLIDGYCK 439
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ + +A + N+M + P++V YT + +G+ Q D A EL E+ GL +VYT
Sbjct: 440 RGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYT 499
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN INGLCK N+E ++++ ME G + DV TY TL+ LCK E +R +++EM
Sbjct: 500 YNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEML 559
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KGI ++ TY+++++G G + LLE L K + ++ + C ++
Sbjct: 560 DKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMK 619
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
E+ K M ++V+P + L+
Sbjct: 620 STTEIYKGMHSQEVAPNENTYNILI 644
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 108/215 (50%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ EM G YT+VI L K +V DAL +L M G+ D V +T V++G
Sbjct: 309 LLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFC 368
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ D A LF+E+ GL D T+ INGLC+ ++ +++ M + G DV+
Sbjct: 369 SKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVV 428
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY L+ CK + + EM + + N+ TY+ + DGL +GD+ A LL E
Sbjct: 429 TYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEM 488
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
NKGL ++ I GLC+ G + +A+ ++ +M
Sbjct: 489 CNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 147/294 (50%), Gaps = 6/294 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTN 211
A + N M+ + T + + +C+Q D+ +++ELL EM G + Y +
Sbjct: 446 AFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELL---HEMCNKGLELNVYTYNS 502
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L K + A+ I+ +M++ G + D+ YT +++ + ++ +A + E+L G
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P + TYNV +NG C VE G K++ M E +P+V+TYN+L++ C + +
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTT 622
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E+ K M + + N TY+I+I G ++ EA +E + KGL +S + I L
Sbjct: 623 EIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLL 682
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
++ +A +M ++ ++ V+ + S ++ + +T I L D+++
Sbjct: 683 NKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLEST--ITLCDELV 734
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 122/239 (51%)
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
LS+ L Q ++ +V Y ++ + ++ +A+ +L++M + G++ + Y
Sbjct: 266 LSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVY 325
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
T V+ + + A + +++ + G+ D + I+G C + ++ A ++ M++
Sbjct: 326 TSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQK 385
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G D +T+ L+ LC+ EL +++EM KG+ +++ TY+++IDG +G+++E
Sbjct: 386 RGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVE 445
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A + E + + + + GLC++G VR A ELL +M +K + + +L+
Sbjct: 446 AFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLI 504
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+ + EL L GL P + N ++ L + IA EL K +V ++N L
Sbjct: 210 LPSAELLRRLRQYGLSPSPESCNAVLSRLPLD-------EAIALFRELPDK-NVCSHNIL 261
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L+AL RL++ + ++ TY M+ G +G++ A LL+E KGL
Sbjct: 262 LKALLSA---GRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGL 318
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
+ ++++ I LC +G V AL +L+ M V+ A V+ ++ SK D
Sbjct: 319 ESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLA 374
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 155/292 (53%), Gaps = 3/292 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ A+E+ + M+ G D T + I++ +C+ + ++ G +++M++ G
Sbjct: 175 KVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAA--GLLKKMEEAGCQPN 232
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
MV Y+ +I SL + V +AL I + MK+ GI PDI YT ++ G+ + +A L +
Sbjct: 233 MVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLN 292
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ L ++PD+ T+NV ++ CK+ V + ++ M E+G +P+V+TY++L+
Sbjct: 293 EMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWT 352
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ R+L M KG N+ +Y+I+I+G I EA L E +++GL + ++
Sbjct: 353 DVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYN 412
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
I G CQ G +R+A +L + M P + ++LL K ++ +F
Sbjct: 413 TLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY-SILLDGFCKQGYLGKAF 463
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 127/236 (53%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ ++M+ +G + + + + ++V +L ++ G++P IV +T +
Sbjct: 110 DVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTL 169
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ ++ +A ELFD+++ G PDVYTYN INGLCK A ++ MEE G
Sbjct: 170 INGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGC 229
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+++TY+TL+ +LC+ R +N ++ MK KGI ++ TY+ +I GL EA
Sbjct: 230 QPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASA 289
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL E + + F+ + C+ G V +AL +LK M + V P + +L+
Sbjct: 290 LLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLM 345
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 140/271 (51%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++I + M G D T + ++ +C+ E + EM L +V + +
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWK--EASALLNEMTSLNIMPDIVTFNVL 309
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K+ KV +ALG+L M G++P++V Y+ ++ G + D V+A +LF ++ G
Sbjct: 310 VDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGC 369
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++++YN+ ING CK ++ +++ M G P+ ++YNTL+ C++ +L ++
Sbjct: 370 KPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQD 429
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L + M G + +L TYSI++DG +G + +A L + L M+ + +C
Sbjct: 430 LFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMC 489
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + A +L ++ + + P +++ ++
Sbjct: 490 KSGNHKDARKLFSELFVQGLQPHVQLYTTII 520
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 21/350 (6%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+ LL C+P Y +I +L + + + ++ K + F + LI+
Sbjct: 218 AGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM-KAKGISPDIFTYTSLIQ 276
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
R++++ L ++ I I N ++ D FC +GK
Sbjct: 277 GLCKFSRWKEASALLNEMTSLNIMP---DIVTFNVLV-DTFCKEGKV------------- 319
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
E LG ++ M ++G +V Y++++ V +A + + M + G KP+I Y
Sbjct: 320 ---SEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSY 376
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++NG + +A +LF+E++ GL P+ +YN I+G C+ + + M
Sbjct: 377 NILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCT 436
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G+ PD+ TY+ LL CK L + L + M+ + NL Y+I++ + G+ +
Sbjct: 437 NGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKD 496
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
A L E +GL ++ I GLC+ GL+ +ALE + M P
Sbjct: 497 ARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPP 546
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 22/314 (7%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC-SLI 175
F + LI ++ + +++LF K+ K IN + IL DGFC +GK + +
Sbjct: 237 FTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILV----DGFCKEGKVNDAKV 292
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ ++ + D+ D +V Y +++ KV A I + M S
Sbjct: 293 VLAIMMKDDIKPD-----------------VVTYNSLMDGYCSINKVNKAKDIFDSMASG 335
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ ++ YT ++NG + +A LF+E+ ++P+V TY+ I+GLCK +
Sbjct: 336 GVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYA 395
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+K++ M + G P+++TY+++L ALCK +++ L+ +K +GI ++ TY+I+I G
Sbjct: 396 LKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKG 455
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L G + +A + E+ L KG + I G C +G KAL LL +M D P
Sbjct: 456 LCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515
Query: 416 ARVWEALLLSSVSK 429
A+ +E ++LS K
Sbjct: 516 AKTYELVILSLFEK 529
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 181/385 (47%), Gaps = 26/385 (6%)
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
++ +++SS H N PP ++ ++ +L + S+ +E E+ F
Sbjct: 40 EENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQME-LNGIESDFFT 98
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGF---------------AIEILNCMI 161
F LI ++ S ++F KI K + + F A+ + ++
Sbjct: 99 FNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVV 158
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF---GMVDYTNVIRSLVK 218
GF +D + +++ +C+ +++ +Q +K++ V Y +I ++ K
Sbjct: 159 AQGFHLDQVSYGTLINGLCKVGRITAA-----LQLLKRVDGKLVQPNAVMYNMIIDNMCK 213
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ V DA + +QM + I PD+ Y +++G A +LF+++ + P+VYT
Sbjct: 214 AKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYT 273
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+N+ ++G CK+ V ++A M + KPDV+TYN+L+ C + ++N+ +++ M
Sbjct: 274 FNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMA 333
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G++ N+Q Y+ M++G + EA L EE + + + I GLC+ G +
Sbjct: 334 SGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIF 393
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
AL+L+ +M D+ P + ++L
Sbjct: 394 YALKLVDEMHDRGQPPNIVTYSSIL 418
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
IN+V A +I + M + G + + + +++ C+ + + DE + +EM+ +
Sbjct: 319 INKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV--DEAINLFEEMRCRKIIPNV 376
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+++I L K ++F AL ++++M G P+IV Y+ +L+ + KA L
Sbjct: 377 VTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTN 436
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L G+ PD+YTY + I GLC+ +E + + G DV Y ++Q C
Sbjct: 437 LKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGF 496
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++ L+ +M+ G + N +TY ++I L K + A LL E + +GL
Sbjct: 497 FDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 84/153 (54%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L V EM G +V Y++++ +L K V A+ +L +K GI+PD+ YT+++ G
Sbjct: 396 LKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKG 455
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ A+ +F++LLV G DVY Y V I G C + + + +++ ME+ G P+
Sbjct: 456 LCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
TY ++ +L + E + +L++EM +G++
Sbjct: 516 AKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 153/309 (49%), Gaps = 39/309 (12%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G D T S ++ + C+ RDL S + + V+EM++ G +V Y +I L +
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKV--VEEMRETGCSLNVVTYNTLIGGLCRA 291
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A G +M+ G+ PD Y ++NG+ + +A+ L DE+ GL+P+V Y
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVY 351
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR---------- 329
+ I+G +Q N + K++ M G +P+ ITY+ L++ LCK+ + R
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411
Query: 330 -----------------LRE--------LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
LR+ L+ EM+ GI N+ TYSI+I+GL G+
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL- 423
A GLLE+ + GL + ++ I G C+ G A E LK+M ++++P + +L+
Sbjct: 472 ASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLII 531
Query: 424 -LSSVSKLD 431
LS+V K+D
Sbjct: 532 GLSNVGKMD 540
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 115/251 (45%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + + EM + GF Y +I + A +L+QM + G+ P+ Y +
Sbjct: 540 DEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQI 599
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L G ++ K +L GL+PD Y + I+ L +++A + +++ +E+ G
Sbjct: 600 LEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGL 659
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD + Y +L+ CK ++ + L+ EM KGI + Y+ +IDG DI A
Sbjct: 660 VPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARN 719
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ + KGL + I G C+ G +R A++L +M + V+P A V+ L
Sbjct: 720 IFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCS 779
Query: 428 SKLDFVNTSFI 438
+ D FI
Sbjct: 780 NSGDLQQALFI 790
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 2/267 (0%)
Query: 159 CMINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
C++++ C ++ S++ + R ++DE V+EM G + Y N+IR L
Sbjct: 334 CLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGL 393
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K ++ A IL QM G D + Y +V+ G + Q + +A L +E+ G+ P+V
Sbjct: 394 CKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNV 453
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
YTY++ INGLC+ E ++ M G KP+ Y L+ C+ + E +K+
Sbjct: 454 YTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKK 513
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M + + +L Y+ +I GL++ G + EA +E L KG + I G G
Sbjct: 514 MTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGN 573
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
+ KA +LL QM + ++P ++ +L
Sbjct: 574 LEKAEQLLHQMLNSGLNPNDFIYAQIL 600
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 25/334 (7%)
Query: 110 ENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG 169
+ F+ +F + LI Y+ A + + L +++ +N F I ++ F D
Sbjct: 552 KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDF---IYAQILEGYFKSDN 608
Query: 170 -KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
+ S L S+ E+ + + L G V I +L + A+ +
Sbjct: 609 LEKVSSTLKSMLEKGLMPDNRLYGIV------------------IHNLSSSGHMQAAVSV 650
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L+ ++ +G+ PD + Y +++G D KA L DE+ G+ P + YN I+G CK
Sbjct: 651 LSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCK 710
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+++ + + G P+ +TY TL+ CK ++ +L EM +G+ +
Sbjct: 711 SDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFV 770
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
YS++ G ++ GD+ +A + EE + +G SS F+ + G C+RG +++ ++ L M
Sbjct: 771 YSVLAAGCSNSGDLQQALFITEEMIARGYAIISS-FNTLVHGFCKRGKLQETVKFLHVMM 829
Query: 409 DKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
DKD+ P E ++ L KL +T F+ L
Sbjct: 830 DKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVEL 863
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 37/313 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+G A IL M G+ D T +L++ Q + +E + EM+K G
Sbjct: 395 KLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHN--KEEAFLLLNEMRKGGISPN 452
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP-------------------------- 239
+ Y+ +I L + + A G+L QM +DG+KP
Sbjct: 453 VYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLK 512
Query: 240 ---------DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
D+ CY ++ G+ +A E +DE+L G P+ +TY I+G
Sbjct: 513 KMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAG 572
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N+E +++ M G P+ Y +L+ K L ++ +K M KG++ + + Y
Sbjct: 573 NLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYG 632
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+I L+S G + A +L GL S ++ I G C+ + KA+ LL +MA K
Sbjct: 633 IVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKK 692
Query: 411 DVSPGARVWEALL 423
+ PG + AL+
Sbjct: 693 GIEPGISCYNALI 705
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 126/264 (47%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M + G DG T I++ +C++ D+ + EM G +V Y+ +I +++
Sbjct: 304 MEDYGLVPDGFTYGAIINGLCKRG--RPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQ 361
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+A I+ +M + G++P+ + Y ++ G+ +A + ++ +G + D TY
Sbjct: 362 GNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTY 421
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ I G +Q+N E ++ M + G P+V TY+ ++ LC++ E R L+++M
Sbjct: 422 NLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIA 481
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ N Y+ +I G +G AC L++ + L ++ I GL G + +
Sbjct: 482 DGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDE 541
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A+E +M +K P + L+
Sbjct: 542 AIEYYDEMLEKGFQPNDFTYGGLI 565
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%)
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
LGL P + N + L + + ++ K+ ME G PDV TY+TL++A CKVR+L
Sbjct: 202 LGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLES 261
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+++V+EM+ G LN+ TY+ +I GL G I EA G +E + GL + I
Sbjct: 262 AKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIIN 321
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+RG +A LL +M+ + P V+ L+
Sbjct: 322 GLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLI 355
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 161/371 (43%), Gaps = 37/371 (9%)
Query: 65 SSLLHSFSIY-NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
L+H +S+ N E + H ++ + + F + +L+ K +N E +
Sbjct: 562 GGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFI-YAQILEGYFKSDNLEK----VSSTL 616
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGF---AIEILNCMINDGFCVDGKTCSLILSSVC 180
K+ + D N Y I ++ G A+ +L+ + +G D ++S C
Sbjct: 617 KSMLEKGLMPD--NRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC 674
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ D+ ++ +G + EM K G G+ Y +I K + + A I N + G+ P+
Sbjct: 675 KAADM--EKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPN 732
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
V YT +++G D A +L++E+L G+ PD + Y+V G +++ + +
Sbjct: 733 CVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFIT- 791
Query: 301 CMEELGSKPDVI--TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
EE+ ++ I ++NTL+ CK +L + + M K IV +L T ++ GL
Sbjct: 792 --EEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGE 849
Query: 359 KGDIIEACGLLEEALNKGLCTQ-----SSMFDETIC-GL-------------CQRGLVRK 399
G + EA + E K + SS+F + I GL C++G + K
Sbjct: 850 AGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHCKQGYLDK 909
Query: 400 ALELLKQMADK 410
AL L + K
Sbjct: 910 ALMLHDALVAK 920
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 165/348 (47%), Gaps = 21/348 (6%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C P Y +I L + + + +L +E E P + T D+HR
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAAAGLLKKME--EAGCQPNVV---TYSTIIDSHR---- 249
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+ RV A++I + M G D T + ++ +C E +
Sbjct: 250 ----------KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWK--EASALLN 297
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM+ L +V + ++ ++ K+ KV +A G+L M G++PD+V Y+ ++ G ++
Sbjct: 298 EMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRS 357
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ V+A +LFD ++ G PDV++YN+ ING CK ++ ++ M G P+ ++YN
Sbjct: 358 EVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYN 417
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ LC++ L R L K M G + NL TYSI++DG +G +A L +
Sbjct: 418 TLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQST 477
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
M++ I +C+ G +R A +L ++ K + P A+++ ++
Sbjct: 478 YSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTII 525
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 163/319 (51%), Gaps = 9/319 (2%)
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
F +N K+ KF A+E+ + M+ G D T + I++ +C+ + ++
Sbjct: 171 FTTLINWLCKVGKF-----AQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAA-- 223
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
G +++M++ G +V Y+ +I S K +V +AL I + MK GI PDI Y ++ G+
Sbjct: 224 GLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGL 283
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ +A L +E+ L ++PD+ T+NV ++ +CK+ V ++ M E+G +PDV
Sbjct: 284 CNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDV 343
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TY++L+ E+ R+L M KG ++ +Y+I+I+G I EA L E
Sbjct: 344 VTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNE 403
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+++GL + ++ I GLCQ G +R+A L K M P + ++LL K
Sbjct: 404 MIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTY-SILLDGFCKQG 462
Query: 432 FVNTSFIRLVDQILNTPCK 450
+ +F RL + +T K
Sbjct: 463 YFGKAF-RLFRAMQSTYSK 480
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 133/263 (50%), Gaps = 2/263 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ ++M+ G + + +I ++V A +L ++ G++P IV +T +
Sbjct: 115 DTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTL 174
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+N + + +A ELFD+++ G PDVYTY INGLCK A ++ MEE G
Sbjct: 175 INWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGC 234
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+V+TY+T++ + K R +N ++ MK KGI ++ TY+ +I GL + EA
Sbjct: 235 QPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASA 294
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
LL E + + F+ + +C+ G V +A +LK M + V P + +L+
Sbjct: 295 LLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYS 354
Query: 428 SKLDFVNTSFIRLVDQILNTPCK 450
+ + V +L D ++ CK
Sbjct: 355 LRSEVVEAR--KLFDAMITKGCK 375
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 137/262 (52%), Gaps = 2/262 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +LN M + D T ++++ ++C++ +S E G ++ M ++G +V Y+++
Sbjct: 292 ASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVS--EAQGVLKTMTEMGVEPDVVTYSSL 349
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + +V +A + + M + G KPD+ Y +++NG + +A++LF+E++ GL
Sbjct: 350 MYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL 409
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +YN I+GLC+ ++ + M G+ P++ TY+ LL CK +
Sbjct: 410 TPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFR 469
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L + M+ NL Y+I+ID + G++ +A L E KGL + ++ I GLC
Sbjct: 470 LFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLC 529
Query: 393 QRGLVRKALELLKQMADKDVSP 414
+ GL+ +ALE + M + P
Sbjct: 530 KEGLLDEALEAFRNMEEDGCPP 551
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 2/203 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A ++ N MI+ G + + + ++ +C+ L E + M G
Sbjct: 390 KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLR--EARNLFKNMHTNGNLPN 447
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+ ++ K+ A + M+S KP++V Y ++++ + + A +LF
Sbjct: 448 LFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFS 507
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
EL V GL P+ Y INGLCK+ ++ ++ MEE G PD I+YN +++ +
Sbjct: 508 ELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHK 567
Query: 326 ELNRLRELVKEMKWKGIVLNLQT 348
+ +R +L+ EM+ KG + ++ T
Sbjct: 568 DESRAVQLIGEMRDKGFIADVGT 590
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVI-VQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DAL N M P I+ +T +L+ ++ + + Y L ++ + GL P++YT ++
Sbjct: 80 DALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSIL 139
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
IN V+ ++A + +LG +P ++T+ TL+ LCKV + + EL +M +G
Sbjct: 140 INCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGC 199
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
++ TY+ +I+GL G+ A GLL++ G + I + V +AL+
Sbjct: 200 RPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALD 259
Query: 403 LLKQMADKDVSPGARVWEALL 423
+ M K +SP + +L+
Sbjct: 260 IFSYMKVKGISPDIFTYNSLI 280
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 2/225 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + MI G D + +++++ C+ + + DE EM G V Y +
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRI--DEAKQLFNEMIHQGLTPNNVSYNTL 419
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + + +A + M ++G P++ Y+++L+G Q + KA LF +
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ YN+ I+ +CK N+ K+ + + G +P+ Y T++ LCK L+ E
Sbjct: 480 KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALE 539
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ M+ G + +Y+++I G D A L+ E +KG
Sbjct: 540 AFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGF 584
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G DG T + +++ +C +L E + +QEM V YT ++ K+
Sbjct: 390 MQRKGLATDGVTYTTLINGLCRAGELKEAEKV--LQEMLARRLDVDEVTYTVLVDGYCKR 447
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A + N M G+ P++V YT + +G+ Q D A EL E+ GL + TY
Sbjct: 448 GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTY 507
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N INGLCK ++ ++ +A M+ G KPDV TY TL+ ALCK EL+R +L++EM
Sbjct: 508 NSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLD 567
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
GI + TY+++++G G + LLE L K + ++ ++ + C ++
Sbjct: 568 NGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKS 627
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
E+ K M ++V P + L+
Sbjct: 628 TTEIYKGMCSRNVEPNENTYNILI 651
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 144/275 (52%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A+ ++ M++ +D + +LS C + DL S + EM++ G V
Sbjct: 344 RVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARR--WFDEMQRKGLATDGVT 401
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +I L + ++ +A +L +M + + D V YT++++G + +A ++ + ++
Sbjct: 402 YTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMV 461
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P+V TY +GLCKQ +V+A +++ M G + + TYN+L+ LCK L+
Sbjct: 462 QRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLD 521
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ + +M G+ ++ TY+ +ID L G++ A LL+E L+ G+ ++ +
Sbjct: 522 QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLM 581
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C G V +LL+ M +K++ P A + +L+
Sbjct: 582 NGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLM 616
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT+V+ L K +V DAL ++ M + D YT VL+G + D V A FDE+
Sbjct: 332 YTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQ 391
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL D TY INGLC+ ++ K++ M D +TY L+ CK ++
Sbjct: 392 RKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMA 451
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ M +G+ N+ TY+ + DGL +GD+ A LL E NKGL + ++ I
Sbjct: 452 EAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLI 511
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G + +A+ + M + P + L+
Sbjct: 512 NGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 4/256 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTN 211
A ++ N M+ G + T + + +C+Q D+ +++ELL EM G Y +
Sbjct: 453 AFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL---HEMSNKGLELNACTYNS 509
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L K + A+ + M + G+KPD+ YT +++ + + +A +L E+L G
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P + TYNV +NG C VE G K++ M E P+ TYN+L++ C +
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTT 629
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E+ K M + + N TY+I+I G + EA E + KG +S + I L
Sbjct: 630 EIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLL 689
Query: 392 CQRGLVRKALELLKQM 407
++ +A +L M
Sbjct: 690 NKKKKFVEARKLFHDM 705
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 15/275 (5%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A E+L+ M N G ++ T + +++ +C+ L D+ + + +M G + Y
Sbjct: 485 VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL--DQAMRTMADMDAAGLKPDVYTY 542
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +I +L K ++ A +L +M +GIKP IV Y +++NG + ++L + +L
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE 602
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ P+ TYN + C NN+++ ++ M +P+ TYN L++ CK R +
Sbjct: 603 KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKE 662
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD---- 385
+ EM KG L +YS +I L K +EA L + +G + +++
Sbjct: 663 AQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722
Query: 386 --------ETICGLCQRGLVRKALELLKQMADKDV 412
E LC LV ++ K D+DV
Sbjct: 723 FNFNEDNLEATLALCDE-LVEASIVKSKAEMDQDV 756
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 13/259 (5%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + C+ +LS L DE + Q + C Y +++ L +V
Sbjct: 230 GISPSPEACNAVLSR------LPLDEAIELFQGLPDKNVC----SYNILLKVLCGAGRVE 279
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA + ++M S PD+V Y ++++G + A +L D+++ G+ P+ Y +
Sbjct: 280 DARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVV 336
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
LC + V + ++ M D Y T+L C +L R EM+ KG+
Sbjct: 337 ALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLA 396
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ TY+ +I+GL G++ EA +L+E L + L + + G C+RG + +A ++
Sbjct: 397 TDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQV 456
Query: 404 LKQMADKDVSPGARVWEAL 422
M + V+P + AL
Sbjct: 457 HNTMVQRGVAPNVVTYTAL 475
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD--VYTYNVYING 285
+L +++ GI P VL+ + + E A ELF L PD V +YN+ +
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLPLDE----AIELFQGL------PDKNVCSYNILLKV 271
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LC VE ++ +E+ S PDV+TY L+ C + EL +L+ +M +G+ N
Sbjct: 272 LCGAGRVEDARQLF---DEMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPN 328
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
Y+ ++ L KG + +A ++E+ ++ + +++ + G C +G + A
Sbjct: 329 ATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFD 388
Query: 406 QMADKDVSPGARVWEALL 423
+M K ++ + L+
Sbjct: 389 EMQRKGLATDGVTYTTLI 406
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 30/322 (9%)
Query: 116 EFIFIDLIKTYADAH--RFQDSVNLFYKIPKFRINRVGFAIEIL------------NCMI 161
EF++ ++IK + + F VN K+ K +NR G IE + N +I
Sbjct: 140 EFVYREMIKRKIELNVISFNIVVNGLCKVGK--LNRAGDVIEDMKVWGVSPNVITYNTLI 197
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
DG+C G+ + +D +L +EM G C V Y +I K E
Sbjct: 198 -DGYCKMGRIGKM----------YKADAIL---KEMVAKGICPNEVTYNILIDGFCKDEN 243
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V A+ + +M+ G++P++V Y +++NG+ +A L D+++ L P+V T+NV
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNV 303
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
ING CK V I + ME+ G P+ +TY TL+ A CK + L M +G
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
I + TY+ +I GL KGD+ A L+ E ++K L ++ I LC++G RKA+
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAV 423
Query: 402 ELLKQMADKDVSPGARVWEALL 423
+LL +M +K ++P + L+
Sbjct: 424 KLLDEMFEKGLNPSHVTYNTLM 445
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 137/265 (51%), Gaps = 2/265 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI ++ A IL M+ G C + T ++++ C+ ++S + EM++ G
Sbjct: 205 RIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSG--AMRVFGEMQRQGLRPN 262
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I L KV +A+ + +QM S ++P++V + +++NG + +A LF+
Sbjct: 263 VVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFN 322
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+ TY I+ CK +E + M + G P+V TYN L+ LC+
Sbjct: 323 DMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKG 382
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ R L+ EM K + ++ TY+I+ID L KG+ +A LL+E KGL ++
Sbjct: 383 DVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYN 442
Query: 386 ETICGLCQRGLVRKALELLKQMADK 410
+ G C+ G +R AL + +M K
Sbjct: 443 TLMDGYCREGNLRAALIVRTRMERK 467
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 132/255 (51%), Gaps = 5/255 (1%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKE---KVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+++MK G ++ Y +I K K++ A IL +M + GI P+ V Y ++++G
Sbjct: 178 IEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDG 237
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
E+ A +F E+ GL P+V TYN+ INGLC V+ + + M +P+
Sbjct: 238 FCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPN 297
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V+T+N L+ CK + +N L +M+ +G+ N TY+ +ID G + +A L
Sbjct: 298 VVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYN 357
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
+++G+ + S ++ I GLC++G V+ A L+ +M K +S + L+ S K
Sbjct: 358 MMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKG 417
Query: 431 DFVNTSFIRLVDQIL 445
+ + ++L+D++
Sbjct: 418 E--SRKAVKLLDEMF 430
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 158 NCMINDGFCVDGK---------------------TCSLILSSVCEQRDLSSDELLGFVQE 196
N +IN G C DGK T +++++ C+ + + +E + +
Sbjct: 267 NILIN-GLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNK--TVNEAINLFND 323
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M+K G + YT +I + K ++ DA + N M GI P++ Y ++ G+ + D
Sbjct: 324 MEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGD 383
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A L +E++ L DV TYN+ I+ LCK+ +K++ M E G P +TYNT
Sbjct: 384 VKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNT 443
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ C+ L + M+ KG N+ T++++I G KG + +A GLL E L +G
Sbjct: 444 LMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERG 503
Query: 377 LCTQSSMFDETICGLCQRGLV 397
L + ++ + ++G V
Sbjct: 504 LVPNRTTYEIIKEEMMEKGFV 524
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 145/306 (47%), Gaps = 17/306 (5%)
Query: 124 KTYADAHRFQDSVNLFYKIPK-FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
K Y+ F D F K K + ++ + AI M D FCV+ +++ +
Sbjct: 46 KKYSKIRSFLDK---FVKYEKDYSVSAIFHAIS----MSGDSFCVNSILADMLVLAFVRN 98
Query: 183 RDLSSDELLGF--VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ L GF + GF ++ ++ LVK+ + D + +M I+ +
Sbjct: 99 LKI----LRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELN 154
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
++ + +V+NG+ +A ++ +++ V G+ P+V TYN I+G CK + K A
Sbjct: 155 VISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADA 214
Query: 301 CMEELGSK---PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++E+ +K P+ +TYN L+ CK ++ + EM+ +G+ N+ TY+I+I+GL
Sbjct: 215 ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLC 274
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
S G + EA L ++ ++ L + I G C+ V +A+ L M + V P A
Sbjct: 275 SDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAM 334
Query: 418 VWEALL 423
+ L+
Sbjct: 335 TYTTLI 340
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 4/238 (1%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
FC + ++ + V+ K+ + G K ++ +L+G++ + + E
Sbjct: 81 FCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDME 140
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
++ E++ + +V ++N+ +NGLCK + +I M+ G P+VITYNTL+
Sbjct: 141 FVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGY 200
Query: 322 CKVRELNRLRE---LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
CK+ + ++ + ++KEM KGI N TY+I+IDG ++ A + E +GL
Sbjct: 201 CKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
++ I GLC G V +A+ L QM D+ P V +L++ K VN +
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNV-VTHNVLINGFCKNKTVNEA 317
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G DG T + +++ +C +L E L +QEM V YT +I K+
Sbjct: 387 MQRKGLATDGVTYTTMINGLCRAVELEEAEKL--LQEMWARRLDVDEVTYTVLIDGYCKR 444
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A + N M G+ P++V YT + +G+ Q D A EL E+ GL + TY
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTY 504
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N INGLCK +E ++ +A M+ KPDV TY TL+ ALCK +L+R L++EM
Sbjct: 505 NSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLD 564
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KGI + TY+++++G G + LL+ L K + ++ ++ + C ++
Sbjct: 565 KGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKS 624
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
E+ K M +DV P + L+
Sbjct: 625 TTEIYKGMRSRDVGPNENTYNILI 648
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 139/271 (51%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++ M+ +D + +LS C + DL S + EM++ G V YT +
Sbjct: 345 ALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARR--WFDEMQRKGLATDGVTYTTM 402
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + ++ +A +L +M + + D V YT++++G + +A ++ + ++ G+
Sbjct: 403 INGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGV 462
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V TY +GLCKQ +V+A +++ M G + + TYN+L+ LCK L +
Sbjct: 463 TPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMR 522
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M + ++ TY+ +ID L GD+ A LL+E L+KG+ ++ + G C
Sbjct: 523 TMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 582
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G V +LL M +K++ P A + +L+
Sbjct: 583 MSGRVEGGKKLLDWMLEKNIHPNAATYNSLM 613
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 4/274 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGM 206
++ A ++ N M+ G + T + + +C+Q D+ +++ELL EM G
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELL---HEMSNKGLELNA 501
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y ++I L K + A+ + M + +KPD+ YT +++ + D +A L E
Sbjct: 502 CTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQE 561
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L G+ P + TYNV +NG C VE G K++ M E P+ TYN+L++ C
Sbjct: 562 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENN 621
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ E+ K M+ + + N TY+I+I G ++ EA +E + KG ++ +
Sbjct: 622 MKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSA 681
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
I L ++ +A EL M + ++ + V++
Sbjct: 682 LIRLLNKKKKFVEARELFHDMRKEGLTAESDVYD 715
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 5/209 (2%)
Query: 149 RVGFAIEILNCMIN-DGFCV--DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ G+ + + M + D C+ D T + ++ ++C+ DL D +QEM G
Sbjct: 513 KAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDL--DRAHSLLQEMLDKGIKPT 570
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ +V +L+ M I P+ Y ++ ++ + E++
Sbjct: 571 IVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYK 630
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ + P+ TYN+ I G CK N++ + M + G + +Y+ L++ L K +
Sbjct: 631 GMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKK 690
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ REL +M+ +G+ Y ID
Sbjct: 691 KFVEARELFHDMRKEGLTAESDVYDFYID 719
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 173/369 (46%), Gaps = 22/369 (5%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQ 133
C+P Y+ ++ L + QF + +L E R+N P+ + LI T A R
Sbjct: 74 GCKPNLWTYNTLVDCLGKAGQFDEALRLL--AEMRDNGCVPDVRTYNCLISTLGKAGRLS 131
Query: 134 DSVNLFYKIPK--------------FRINRVGF---AIEILNCMINDGFCVDGKTCSLIL 176
++ LF ++ + + + +VG A+E+L M G D T S ++
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + +D + + QEMK+ G + +T ++ +L K +V DAL +L++MK G
Sbjct: 192 TGL--GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+KP +V Y ++ G D V+A L DE+ G PDV TY+ I GL K + ++
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ ME+ G PD ITYNTL+ L K LN L MK KG ++ TYS +I L
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITAL 369
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ AC L EE + G+ + I L + G V A L +M K +SP
Sbjct: 370 GKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDV 429
Query: 417 RVWEALLLS 425
+ A L S
Sbjct: 430 ITYNAFLNS 438
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 185/393 (47%), Gaps = 21/393 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + C P Y +I L ++ + + + KR + F L+
Sbjct: 171 LLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM-KRRGRKPDSITFTALMDAL 229
Query: 127 ADAHRFQDSVNLFYKIPKFRI--------------NRVGFAIE---ILNCMINDGFCVDG 169
A R D++ L ++ + + +VG +E +L+ M +G D
Sbjct: 230 GKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDV 289
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T S +++ + + L DE +++M+K G + Y +I L K + DA +
Sbjct: 290 VTYSCLITGLIKASQL--DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLF 347
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
++MKS G PD+V Y+ ++ + A LF+E+ +G+ PD++TY I L K
Sbjct: 348 DRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKA 407
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
V+ ++ + M G PDVITYN L +L + R++ ++MK G++ ++ TY
Sbjct: 408 GQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATY 467
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
++ GL+ ++ +ACGLL+E + +G S FDE + L G V +A ELL+
Sbjct: 468 DALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANS 527
Query: 410 KDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
K + PGA + A L+ +++K V+ +F L D
Sbjct: 528 KGLWPGASSYNA-LIDALAKAGRVSEAFNTLED 559
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 135/278 (48%), Gaps = 9/278 (3%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+L + CE+ L +E+K + +V Y+ +I SL + K AL ++ +M
Sbjct: 18 ALAKAGQCEEAQL-------LFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
++ G KP++ Y +++ + + +A L E+ G VPDV TYN I+ L K +
Sbjct: 71 QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ A M E G PD TYN+L+ L KV + EL++EM+ G ++ TYS +
Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSL 190
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I GL G+ ++A L +E +G S F + L + G V ALELL +M ++ V
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
PG + AL+ D V L+D++ CK
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEA--YNLLDEMKRNGCK 286
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 159/358 (44%), Gaps = 21/358 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+LL C+P Y +I L + SQ + VL +EK E + LI
Sbjct: 275 NLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEK-EGCPPDTITYNTLING 333
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
A D+ LF + M + G D T S +++++ + +
Sbjct: 334 LGKAGLLNDAGRLFDR------------------MKSKGCNPDVVTYSTLITALGKAARV 375
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
S +L +EM+ +G + Y ++I L K +V DA + ++M+ G+ PD++ Y
Sbjct: 376 ESACVL--FEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYN 433
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
LN + + +A ++F+++ GL+PDV TY+ + GL K V+ ++ + E
Sbjct: 434 AFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQ 493
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G D + ++ L+ L ++ EL++ KG+ +Y+ +ID LA G + EA
Sbjct: 494 GCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LE+ +G + I L Q G + A ELL++M+ + + R + L+
Sbjct: 554 FNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P++V Y +LN + +A+ LF+EL PDV +Y+ IN L + EA +++
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+A M+ G KP++ TYNTL+ L K + + L+ EM+ G V +++TY+ +I L
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + EA L E +G + ++ I GL + G +KA+ELL++M P
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 419 WEALL 423
+ +L+
Sbjct: 187 YSSLI 191
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
V EM+ G + Y ++ L K + +AL +L +M+ +G PD+ Y +++ +
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+A LF E+ G VPD +TYN I GL K + ++++ ME G PDV+T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y++L+ L K E + +L +EMK +G + T++ ++D L G + +A LL+E
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+G+ ++ I G + G + +A LL +M P + L+ L S+LD
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 130/304 (42%), Gaps = 22/304 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
C P Y+ +I L + D + D ++ + P+ + + LI A R +
Sbjct: 319 GCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGC--NPDVVTYSTLITALGKAARVE 376
Query: 134 DSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+ LF ++ I +V A + + M G D T + L
Sbjct: 377 SACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFL 436
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+S+ R E ++MK+ G + Y ++ L K ++V DA G+L ++ G
Sbjct: 437 NSL--GRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
D + + L + + +A EL GL P +YN I+ L K V
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ ++E G KPD+++Y++L+ AL + +++ EL++EM +G+ L+ ++YS ++ L
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Query: 357 ASKG 360
G
Sbjct: 615 QDWG 618
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 159/308 (51%), Gaps = 12/308 (3%)
Query: 107 EKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFC 166
E E +ET + L DAH + ++ K+ R+G A+ +L M GF
Sbjct: 313 EATELYET-----MGLKGCQPDAHTYSILMHGLCKL-----GRIGSAVRLLREMEKKGFA 362
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
+ T +++L S C ++ D+ ++EM G Y +I +L K ++ +A+
Sbjct: 363 PNVVTYTIVLHSFC--KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAM 420
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
G++ +M+S G PDI Y ++ + E +AE +F+ LL G+V + TYN I+ L
Sbjct: 421 GLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHAL 480
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
+ + +++ M G DV++YN L++A+CK ++R L++EM KGI N
Sbjct: 481 LRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNN 540
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+Y+I+I L + + +A L ++ LN+GL ++ I GLC+ G + AL LL++
Sbjct: 541 VSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEK 600
Query: 407 MADKDVSP 414
+ +++V P
Sbjct: 601 LHNENVHP 608
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 140/298 (46%), Gaps = 33/298 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ R A+ +L M G D ++ ++C+Q ++ E + EM +G
Sbjct: 171 RLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT--EAATLLNEMLLMGCAAD 228
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP-------------------------- 239
+ + +V+R + +V +A ++++M + G P
Sbjct: 229 VNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLG 288
Query: 240 -----DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
++V + V+ G + + +A EL++ + + G PD +TY++ ++GLCK + +
Sbjct: 289 RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGS 348
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++++ ME+ G P+V+TY +L + CK + R L++EM KG+ LN Q Y+ MI
Sbjct: 349 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 408
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
L G + EA GL++E ++G ++ I LC + +A + + + ++ V
Sbjct: 409 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 466
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 154/344 (44%), Gaps = 25/344 (7%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+ L + + C+P Y ++ L + + +L +EK+ F + ++
Sbjct: 315 TELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKK-GFAPNVVTYTIVLH 373
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
++ + D+ L ++ +N G+ N MI C DG+
Sbjct: 374 SFCKNGMWDDTRALLEEMSAKGLTLNSQGY-----NGMIY-ALCKDGRM----------- 416
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
DE +G +QEM+ G + Y +I L E++ +A + + +G+ + +
Sbjct: 417 -----DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 471
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++ ++ + A L E+++ G DV +YN I +CK NV+ + ++ M
Sbjct: 472 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 531
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E G KP+ ++YN L+ LCK R + EL K+M +G+ ++ TY+ +I+GL G +
Sbjct: 532 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 591
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
A LLE+ N+ + ++ I C+ L+ A LL +
Sbjct: 592 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 635
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 174/411 (42%), Gaps = 52/411 (12%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+LL + + C P Y VI L + + +++L+ + L+
Sbjct: 180 ALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEML--------------LMGC 225
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG-KTCSLILSSVCEQRD 184
AD + F D V + RV A +++ M+ G C+ G T +L +C R
Sbjct: 226 AADVNTFDDVVRGMCGL-----GRVREAARLVDRMMTKG-CMPGVMTYGFLLQGLCRVRQ 279
Query: 185 L-SSDELLGFVQEMKK------LGFCFG----------------------MVDYTNVIRS 215
+ +LG V E+ +G C Y+ ++
Sbjct: 280 ADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 339
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K ++ A+ +L +M+ G P++V YT+VL+ + L +E+ GL +
Sbjct: 340 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 399
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
YN I LCK ++ + +I M G PD+ +YNT++ LC ++ + +
Sbjct: 400 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 459
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
+ +G+V N TY+ +I L G +A L +E + G ++ I +C+ G
Sbjct: 460 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 519
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
V ++L LL++MA+K + P V +L+S + K V + + L Q+LN
Sbjct: 520 NVDRSLVLLEEMAEKGIKPN-NVSYNILISELCKERRVRDA-LELSKQMLN 568
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
F FG+ R+L + + +AL +L M G PD V Y V++ + Q +A
Sbjct: 160 FTFGVA-----ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
L +E+L++G DV T++ + G+C V +++ M G P V+TY LLQ L
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+VR+ + R ++ + LN+ ++ +I G ++G + EA L E KG +
Sbjct: 275 CRVRQADEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + GLC+ G + A+ LL++M K +P + +L S
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 374
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P T+ +ALC++ + L++ M G V + Y +I L +G + EA L
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E L G + FD+ + G+C G VR+A L+ +M K PG + LL
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 33/202 (16%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P +T+ V LC+ + + ++ M G PD + Y T++ ALC + L
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK--------------GLCT 379
+ EM G ++ T+ ++ G+ G + EA L++ + K GLC
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276
Query: 380 QSS-----------------MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+F+ I G G + +A EL + M K P A + ++
Sbjct: 277 VRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTY-SI 335
Query: 423 LLSSVSKLDFVNTSFIRLVDQI 444
L+ + KL + ++ +RL+ ++
Sbjct: 336 LMHGLCKLGRIGSA-VRLLREM 356
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 146/269 (54%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+G A+ +L M GF + T +++L S C ++ D+ ++EM G
Sbjct: 358 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC--KNGMWDDTRALLEEMSAKGLTLN 415
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I +L K ++ +A+G++ +M+S G PDI Y ++ + E +AE +F+
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
LL G+V + TYN I+ L + + +++ M G DV++YN L++A+CK
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++R L++EM KGI N +Y+I+I L + + +A L ++ LN+GL ++
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLC+ G + AL LL+++ +++V P
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHP 624
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 164/382 (42%), Gaps = 54/382 (14%)
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
H+L L F + +P +Y+ V+ LA D ++ + R+ F F
Sbjct: 124 HLLDQLPRRFGV---QPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
+ R+ R A+ +L M G D ++ ++C+
Sbjct: 181 AARALC------------------RLGRADEALALLRGMARHGCVPDAVLYQTVIHALCD 222
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP-- 239
Q ++ E + EM +G + + +V+R + +V +A ++++M + G P
Sbjct: 223 QGGVT--EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 280
Query: 240 -----------------------------DIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++V + V+ G + + +A EL++ + +
Sbjct: 281 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK 340
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G PD +TY++ ++GLCK + + ++++ ME+ G P+V+TY +L + CK +
Sbjct: 341 GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 400
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
R L++EM KG+ LN Q Y+ MI L G + EA GL++E ++G ++ I
Sbjct: 401 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 460
Query: 391 LCQRGLVRKALELLKQMADKDV 412
LC + +A + + + ++ V
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGV 482
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 154/344 (44%), Gaps = 25/344 (7%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+ L + + C+P Y ++ L + + +L +EK+ F + ++
Sbjct: 331 TELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKK-GFAPNVVTYTIVLH 389
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
++ + D+ L ++ +N G+ N MI C DG+
Sbjct: 390 SFCKNGMWDDTRALLEEMSAKGLTLNSQGY-----NGMIY-ALCKDGRM----------- 432
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
DE +G +QEM+ G + Y +I L E++ +A + + +G+ + +
Sbjct: 433 -----DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++ ++ + A L E+++ G DV +YN I +CK NV+ + ++ M
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E G KP+ ++YN L+ LCK R + EL K+M +G+ ++ TY+ +I+GL G +
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
A LLE+ N+ + ++ I C+ L+ A LL +
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 174/411 (42%), Gaps = 52/411 (12%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+LL + + C P Y VI L + + +++L+ + L+
Sbjct: 196 ALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEML--------------LMGC 241
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG-KTCSLILSSVCEQRD 184
AD + F D V + RV A +++ M+ G C+ G T +L +C R
Sbjct: 242 AADVNTFDDVVRGMCGL-----GRVREAARLVDRMMTKG-CMPGVMTYGFLLQGLCRVRQ 295
Query: 185 LS-SDELLGFVQEMKK------LGFCFG----------------------MVDYTNVIRS 215
+ +LG V E+ +G C Y+ ++
Sbjct: 296 ADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 355
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K ++ A+ +L +M+ G P++V YT+VL+ + L +E+ GL +
Sbjct: 356 LCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLN 415
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
YN I LCK ++ + +I M G PD+ +YNT++ LC ++ + +
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
+ +G+V N TY+ +I L G +A L +E + G ++ I +C+ G
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
V ++L LL++MA+K + P V +L+S + K V + + L Q+LN
Sbjct: 536 NVDRSLVLLEEMAEKGIKPN-NVSYNILISELCKERRVRDA-LELSKQMLN 584
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
F FG+ R+L + + +AL +L M G PD V Y V++ + Q +A
Sbjct: 176 FTFGVA-----ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 230
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
L +E+L++G DV T++ + G+C V +++ M G P V+TY LLQ L
Sbjct: 231 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 290
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+VR+ + R ++ + LN+ ++ +I G ++G + EA L E KG +
Sbjct: 291 CRVRQADEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 346
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + GLC+ G + A+ LL++M K +P + +L S
Sbjct: 347 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 390
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 259 KAEELFDEL-LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITYNT 316
+A L D+L G+ P +YNV ++ L + + + + M P T+
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+ALC++ + L++ M G V + Y +I L +G + EA LL E L G
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ FD+ + G+C G VR+A L+ +M K PG + LL
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 287
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 164/324 (50%), Gaps = 5/324 (1%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC 159
++++D KR E + +F ++ K A+ + +V L + + K I + GF E+
Sbjct: 202 TTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTV-LIHGLFKNGIKKQGF--EMYEK 258
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M DG + T + +++ C +D + + EM++ G +V Y +I L ++
Sbjct: 259 MQEDGVFPNLYTYNCVMNQHC--KDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K +A +++QMKSDGI P+++ Y +++G KA L +L GL P + TY
Sbjct: 317 MKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ ++G CK+ + K++ MEE G KP ITY L+ ++ + + +L M+
Sbjct: 377 NILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEE 436
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ ++ TYS++I G KG + EA L + + K L +++ + G C+ G +
Sbjct: 437 LGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYR 496
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL L ++M +K++ P + ++
Sbjct: 497 ALRLFREMEEKELPPNVASYRYMI 520
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 175/360 (48%), Gaps = 31/360 (8%)
Query: 94 SQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFA 153
SQF SS+L ++ + E ET ++ +I Y + S++ F ++ +++ GF
Sbjct: 72 SQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEM----VDK-GF- 125
Query: 154 IEILNCMINDGFCVDGKTC----------------------SLILSSVCEQRDLSSDELL 191
+ NC N V G + +++ CE ++ ++
Sbjct: 126 VPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEI--EKSF 183
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+ E+++ GF +V YT +I K+ ++ A + +M G+ + YT++++G+
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ E+++++ G+ P++YTYN +N CK + K+ M E G ++
Sbjct: 244 FKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNI 303
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TYNTL+ LC+ + N +++ +MK GI NL TY+ +IDG G + +A L +
Sbjct: 304 VTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
++GL ++ + G C++G A +++K+M ++ + P +++ +L+ + +++D
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP-SKITYTILIDTFARMD 422
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 113/231 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M++ G + Y V+ K + DA + ++M+ G+ +IV Y ++ G+ +
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A ++ D++ G+ P++ TYN I+G C + + + ++ G P ++TY
Sbjct: 317 MKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N L+ CK + + ++VKEM+ +GI + TY+I+ID A ++ +A L
Sbjct: 377 NILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEE 436
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GL + I G C +G + +A L K M K + P ++ ++L
Sbjct: 437 LGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLG 487
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++++ M +DG + T + ++ C L + L +++K G +V Y +
Sbjct: 322 ANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLG--KALSLCRDLKSRGLSPSLVTYNIL 379
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ KK A ++ +M+ GIKP + YT++++ ++ KA +L + LGL
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGL 439
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV+TY+V I+G C + + ++ M +P+ + YNT++ CK R
Sbjct: 440 TPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALR 499
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L +EM+ K + N+ +Y MI+ L + EA GL+E+ ++ G+ S+ +
Sbjct: 500 LFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILN 552
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 89/209 (42%), Gaps = 37/209 (17%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ ++G A+ + + + G T ++++S C++ D S + V+EM++ G
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV--VKEMEERGIKPSK 408
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ YT +I + + + + A+ + + M+ G+ PD+ Y+++++G ++ +A LF
Sbjct: 409 ITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKL 468
Query: 267 L--------------LVLG---------------------LVPDVYTYNVYINGLCKQNN 291
+ +VLG L P+V +Y I LCK+
Sbjct: 469 MVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ ++ M + G P N + +A
Sbjct: 529 SKEAEGLVEKMIDTGIDPSDSILNLISRA 557
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 153/292 (52%), Gaps = 3/292 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + A+E+ + M+ G D T + I++ +C+ + + G ++M++ G
Sbjct: 57 KVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAA--GLFKKMEEAGCQLN 114
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+ +I SL K +V +AL I + MK+ I P I YT ++ G+ + +A L +
Sbjct: 115 VVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLN 174
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ L ++P+V T+NV ++ CK+ V A ++ M E+G +PDV+TYN+L+
Sbjct: 175 EMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWT 234
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+ R+L M KG ++ +YSI+I+G I EA L E +++G + ++
Sbjct: 235 EVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYN 294
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
I GLCQ G +R+A +L K M P + A+LL K ++ +F
Sbjct: 295 TLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTY-AILLDGFCKQGYLGKAF 345
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 124/235 (52%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + EM L +V + ++ + K+ KV A G+L M G++PD+V Y ++
Sbjct: 168 EASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLM 227
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G + + V+A +LFD ++ G PDV++Y++ ING CK ++ ++ M GS
Sbjct: 228 YGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGST 287
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+ ++YNTL+ LC++ L ++L K M G + NL TY+I++DG +G + +A L
Sbjct: 288 PNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRL 347
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ L M++ + +C+ G ++ A EL ++ + P +++ ++
Sbjct: 348 FRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTII 402
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 2/215 (0%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G++P IV +T ++NG+ + +A ELFD+++ G PD YTY INGLCK
Sbjct: 40 GLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALA 99
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ MEE G + +V+TY+TL+ +LCK R +N ++ MK K I + TY+ +I G
Sbjct: 100 AGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQG 159
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L + EA LL E + + F+ + C+ G V A +LK M + V P
Sbjct: 160 LCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPD 219
Query: 416 ARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ +L+ + V +L D ++ CK
Sbjct: 220 VVTYNSLMYGYSMWTEVVEAR--KLFDVMITKGCK 252
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 159/341 (46%), Gaps = 25/341 (7%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C+ Y +I +L + + + + ++ K ++ F + LI+ + R++++
Sbjct: 111 CQLNVVTYSTLIHSLCKYRRVNEALDIFSYM-KAKDISPTIFTYTSLIQGLCNFSRWKEA 169
Query: 136 VNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
L ++ I N V F + + D FC +GK L+++ G
Sbjct: 170 SALLNEMTSLNIMPNVVTFNVLV------DTFCKEGKV-------------LAAE---GV 207
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++ M ++G +V Y +++ +V +A + + M + G KPD+ Y++++NG
Sbjct: 208 LKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCK 267
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ +A++LF+E++ G P+ +YN I+GLC+ + + M G+ P++ T
Sbjct: 268 AKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYT 327
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y LL CK L + L + M+ + NL Y+I+++ + G++ +A L E
Sbjct: 328 YAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELF 387
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL ++ I GLC+ GL+ +ALE + M D P
Sbjct: 388 VIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPP 428
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 8/257 (3%)
Query: 171 TCSL--ILSSVCEQRDLSSDELLGFVQEMK--KLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
TC+L +++ C+ + + LGF K KLG +V +T +I L K K A+
Sbjct: 10 TCTLNILINCFCQLQRVD----LGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ + M + G +PD YT ++NG+ + A LF ++ G +V TY+ I+ L
Sbjct: 66 ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK V + + + M+ P + TY +L+Q LC L+ EM I+ N+
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNV 185
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
T+++++D +G ++ A G+L+ G+ ++ + G V +A +L
Sbjct: 186 VTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDV 245
Query: 407 MADKDVSPGARVWEALL 423
M K P + L+
Sbjct: 246 MITKGCKPDVFSYSILI 262
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL P+ T N+ IN C+ V+ G ++A +LG +P ++T+ TL+ L KV + +
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL +M +G + TY+ +I+GL G+ A GL ++ G + I
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ V +AL++ M KD+SP + +L+
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLI 157
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 153/308 (49%), Gaps = 20/308 (6%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
LI + + +D++ LF K+ IN + IL D FC +G+ V E
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILV----DAFCKEGR--------VKE 298
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
++ G MK+ G +V Y +++ +V A ILN M G+ +
Sbjct: 299 AKN-------GLAMMMKQ-GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATV 350
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y +V+NG + +A +LF E+ + P+V TYN I+GLCK + +++I
Sbjct: 351 RSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDL 410
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M + G +PD+ITY+++L ALCK +++ L+ ++K +GI N+ TY+I+IDGL G
Sbjct: 411 MHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGR 470
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ +A + E+ L KG + + I G C GL +AL LL +M D P A +E
Sbjct: 471 LEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530
Query: 422 LLLSSVSK 429
++ S K
Sbjct: 531 IICSLFDK 538
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 183/402 (45%), Gaps = 60/402 (14%)
Query: 80 PEAYHF-VIKTLAENSQFCDISSVLDHIEK-----RENFETPEFIFIDLIKTYADAHRFQ 133
PE HF I + + ++ F + + V+D + R+N P+ F ++ + + +
Sbjct: 28 PENTHFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYH 87
Query: 134 DSVNLFYKI------PKF-----------RINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++LF K+ P F ++ + FA +L ++ G+ D T + +
Sbjct: 88 TVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFI 147
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGF-----CFG-------------------------- 205
C + + + L F ++ LGF +G
Sbjct: 148 KGFCLKGQIH--QALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKL 205
Query: 206 ----MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V Y+ +I S+ K + V DA + ++M S I +IV Y+ +++G + A
Sbjct: 206 VQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAI 265
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
LF+++ + PDVYT+N+ ++ CK+ V+ +A M + G KPD++TYN+L+
Sbjct: 266 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGY 325
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C V E+N + ++ M +G+ +++Y+I+I+G + +A L +E +K +
Sbjct: 326 CLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNV 385
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GLC+ G + ALEL+ M D+ P + ++L
Sbjct: 386 ITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSIL 427
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 177/409 (43%), Gaps = 46/409 (11%)
Query: 48 TPPTKQQQQI------PKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISS 101
TPP + QI K H + SL +P ++ +I + S
Sbjct: 67 TPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFS 126
Query: 102 VLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNC 159
VL I K +E IK + + ++N K+ F +++V + I
Sbjct: 127 VLAKILKM-GYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLI--- 182
Query: 160 MINDGFC--------------VDGKTCSL-------ILSSVCEQRDLSSDELLGFVQEMK 198
+G C VDGK L I+ S+C+ +++ ++ EM
Sbjct: 183 ---NGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNV--NDAFDLYSEMV 237
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
+V Y+ +I K+ DA+G+ N+M S+ I PD+ + ++++ +
Sbjct: 238 SRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVK 297
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A+ ++ G+ PD+ TYN ++G C N V ++ M G V +YN ++
Sbjct: 298 EAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVI 357
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG-- 376
CK++ +++ +L KEM K I N+ TY+ +IDGL G I A L++ ++G
Sbjct: 358 NGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQ 417
Query: 377 --LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ T SS+ D LC+ LV KA+ LL ++ D+ + P + L+
Sbjct: 418 PDIITYSSILD----ALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILI 462
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+N V A ILN M + G ++ +++++ C+ + + D+ + +EM +
Sbjct: 328 VNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMV--DQAMKLFKEMHHKQIFPNV 385
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y ++I L K ++ AL +++ M G +PDI+ Y+ +L+ + KA L +
Sbjct: 386 ITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIK 445
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L G+ P++YTY + I+GLCK +E + + G V TY ++Q C
Sbjct: 446 LKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGL 505
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ L+ +MK + + TY I+I L K + +A LL E + +GL
Sbjct: 506 FDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 109/283 (38%), Gaps = 47/283 (16%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ +A+E+++ M + G D T S IL ++C+ + D+ + + ++K G M
Sbjct: 400 RISYALELIDLMHDRGQQPDIITYSSILDALCKNHLV--DKAIALLIKLKDQGIRPNMYT 457
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +I L K ++ DA I + G + YT+++ G + +A L ++
Sbjct: 458 YTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMK 517
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG----------------SKPDVI 312
+PD TY + I L ++ + K++ M G + P
Sbjct: 518 DNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHF 577
Query: 313 TYNTLLQALCKVRELNRLRELVKEM---------------------------KW--KGIV 343
N LQ N + L++ + W +G +
Sbjct: 578 LNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYI 637
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L++ TY++MI G S G E+ LL + G + +D
Sbjct: 638 LDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYDR 680
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 138/253 (54%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++S +C RDL D + G +EM +G + Y +I+ + ++ +A+ + N
Sbjct: 222 TFNTLISGMCRARDL--DAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFN 279
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M+ G+ P+ V +T +++ + + +L+ ++ V G++PD+ YN +NGLC+
Sbjct: 280 EMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRAR 339
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N++A ++ M+ G KPD +TY TL+ CK +L+ ++ ++M K + L+ TY+
Sbjct: 340 NLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYT 399
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I GL+ G ++A +L E + L ++ + I C++G V+ +LLK+M +K
Sbjct: 400 ALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNK 459
Query: 411 DVSPGARVWEALL 423
PG + ++
Sbjct: 460 GKKPGVVTYNVIM 472
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 136/266 (51%), Gaps = 7/266 (2%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + CS ++S R S+ E F ++ G + ++R V+ ++
Sbjct: 149 GISLPAPVCSGLMS-----RLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELV 203
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A + ++M+ ++P +V + +++G+ D + L+ E+ +G+ PDVYTY I
Sbjct: 204 SARKVFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALI 262
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
G C+ +E +KM M + G P+ + + TL+ A CK +N +L ++M+ +G++
Sbjct: 263 KGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM 322
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+L Y+ +++GL ++ A ++EE N GL + I G C+ G + A+++
Sbjct: 323 PDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDI 382
Query: 404 LKQMADKDVSPGARVWEALLLSSVSK 429
++MA+K+VS + A L+S +SK
Sbjct: 383 KQKMAEKEVSLDEVTYTA-LISGLSK 407
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 22/295 (7%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNC 159
+ + LIK + R +++V +F ++ +N V +++
Sbjct: 256 YTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQD 315
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G D + +++ +C R+L + E V+EMK G V YT +I K
Sbjct: 316 MRVRGVMPDLVAYNALVNGLCRARNLKAAE--SIVEEMKNAGLKPDKVTYTTLIDGCCKD 373
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ A+ I +M + D V YT +++G+ V AE + E++ L PD TY
Sbjct: 374 GKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTY 433
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+ C++ +V+ G K++ M+ G KP V+TYN ++ LCK+ ++ L+ M
Sbjct: 434 TMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLN 493
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
G+ + TY+I++DG G + + E +KG+ +++ I L ++
Sbjct: 494 IGVSPDDITYNILLDGQCKHGKVANS---EELESSKGMVPDFAVYTSLISELAKK 545
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 151/370 (40%), Gaps = 25/370 (6%)
Query: 55 QQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET 114
++P P + L P ++ +++ + V D E R + +
Sbjct: 162 SRLPSTPEAYTFYLQLLDA-GMAPETRLFNVLMRDFVRLGELVSARKVFD--EMRRSVQP 218
Query: 115 PEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILN-CMINDGFCVDGKTCS 173
F LI A R D+V+ YK ++ VG ++ + GFC G+
Sbjct: 219 TVVTFNTLISGMCRA-RDLDAVDGLYK----EMSDVGVKPDVYTYGALIKGFCRTGRM-- 271
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+ + EM+ G V +T +I + K+ V + + M+
Sbjct: 272 --------------ENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMR 317
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G+ PD+V Y ++NG+ + AE + +E+ GL PD TY I+G CK ++
Sbjct: 318 VRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLD 377
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ + M E D +TY L+ L K +++EM + + TY+++I
Sbjct: 378 MAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVI 437
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
D KGD+ LL+E NKG ++ + GLC+ G ++ A LL M + VS
Sbjct: 438 DAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVS 497
Query: 414 PGARVWEALL 423
P + LL
Sbjct: 498 PDDITYNILL 507
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 135/278 (48%), Gaps = 5/278 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ A+++ N M + G + + ++ + C++ ++++ + Q+M+ G
Sbjct: 267 RTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAG--MDLYQDMRVRGVMPD 324
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ L + + A I+ +MK+ G+KPD V YT +++G A ++
Sbjct: 325 LVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQ 384
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + D TY I+GL K +++ M E +PD TY ++ A C+
Sbjct: 385 KMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKG 444
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L+KEM+ KG + TY+++++GL G + A LL LN G+ ++
Sbjct: 445 DVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYN 504
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C+ G V + EL + K + P V+ +L+
Sbjct: 505 ILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTSLI 539
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 166/324 (51%), Gaps = 5/324 (1%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC 159
++++D K+ E + +F ++ K A+ +V L + K + + GF E+
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV-LINGLFKNGVKKQGF--EMYEK 258
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M DG + T + +++ +C +D + + EM++ G +V Y +I L ++
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLC--KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A +++QMKSDGI P+++ Y +++G KA L +L GL P + TY
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ ++G C++ + KM+ MEE G KP +TY L+ + + + +L M+
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+V ++ TYS++I G KG + EA L + + K +++ I G C+ G +
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL+LLK+M +K+++P + ++
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMI 520
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 175/374 (46%), Gaps = 57/374 (15%)
Query: 93 NSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGF 152
+SQF SS+L ++ + E +T ++ +I +Y + S+NL
Sbjct: 71 HSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQ----SLNL-------------- 112
Query: 153 AIEILNCMINDGFCVDGKTC-----------------------------------SLILS 177
+I N M+++GF V G C +++
Sbjct: 113 SISYFNEMVDNGF-VPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIK 171
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
CE ++ ++ + E+ + GF +V YT +I KK ++ A + +M G+
Sbjct: 172 GCCEAGEI--EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL 229
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+ YT+++NG+ + E+++++ G+ P++YTYN +N LCK + +
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M E G +++TYNTL+ LC+ +LN ++V +MK GI NL TY+ +IDG
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G + +A L + ++GL ++ + G C++G A +++K+M ++ + P ++
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP-SK 408
Query: 418 VWEALLLSSVSKLD 431
V +L+ + ++ D
Sbjct: 409 VTYTILIDTFARSD 422
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 115/231 (49%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M++ G + Y V+ L K + DA + ++M+ G+ +IV Y ++ G+ +
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A ++ D++ G+ P++ TYN I+G C + + + ++ G P ++TY
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N L+ C+ + + ++VKEM+ +GI + TY+I+ID A ++ +A L
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GL + I G C +G + +A L K M +K+ P ++ ++L
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 130/272 (47%), Gaps = 9/272 (3%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++S + +S LL ++ E + F + Y +I S V+ + + ++ N+M
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSKTKFRL--YEVIINSYVQSQSLNLSISYFNEMVD 122
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+G P C+ +L V+ + + F+E +V DVY++ + I G C+ +E
Sbjct: 123 NGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEK 181
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ + E G P+V+ Y TL+ CK E+ + ++L EM G+V N +TY+++I+
Sbjct: 182 SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL G + + E+ G+ ++ + LC+ G + A ++ +M ++ VS
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 415 GARVWEALL--LSSVSKLDFVNTSFIRLVDQI 444
+ L+ L KL+ N ++VDQ+
Sbjct: 302 NIVTYNTLIGGLCREMKLNEAN----KVVDQM 329
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ ++G A+ + + + G T ++++S C + D S + V+EM++ G
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM--VKEMEERGIKPSK 408
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I + + + + A+ + M+ G+ PD+ Y+++++G ++ +A LF
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 267 L--------------LVLG---------------------LVPDVYTYNVYINGLCKQNN 291
+ ++LG L P+V +Y I LCK+
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 292 VEAGIKMIACMEELGSKPDV 311
+ +++ M + G P
Sbjct: 529 SKEAERLVEKMIDSGIDPST 548
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 180/384 (46%), Gaps = 26/384 (6%)
Query: 54 QQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFE 113
+ +IP + +LH C P Y ++ + S + ++LD E R
Sbjct: 264 RGRIPDALAVFDDMLHR----GCSPSVVTYSILLDATCKESGYRQAMALLD--EMRAKGC 317
Query: 114 TPEFIFID-LIKTYADAHRFQDSVNLFYKIPKF--RINRVGFAI---------------E 155
P+ + + LI + +++N+ +P + + V + E
Sbjct: 318 EPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEE 377
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L M ++ D T + I++S+C+Q + D + V M + G +V Y++++
Sbjct: 378 LLAEMTSNNCAPDEVTFNTIVTSLCQQGLV--DRAIEVVDHMSEHGCVADIVTYSSILDG 435
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L +V DA+ +L+++KS G KPD + YT VL G+ E + +AEEL E+L PD
Sbjct: 436 LCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPD 495
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+N + LC++ V+ I+++ M E G PD++TYN ++ LC ++ EL+
Sbjct: 496 EVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLS 555
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
+++ G ++ T++ ++ GL +A L+ + F+ I LCQ+G
Sbjct: 556 DLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKG 615
Query: 396 LVRKALELLKQMADKDVSPGARVW 419
L+ +A+E LK MA+ P + +
Sbjct: 616 LLTQAIETLKIMAENGCVPNSSTY 639
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 164/354 (46%), Gaps = 21/354 (5%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
NC PP + +IK L + + D V + T + ++ Y A R +D
Sbjct: 183 NC-PPVVPCNILIKRLCSDGRVSDAERVFAALGPSATVVT----YNTMVNGYCRAGRIED 237
Query: 135 SVNLFYKIP----KFRIN----------RVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+ L +P F N R+ A+ + + M++ G T S++L + C
Sbjct: 238 ARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATC 297
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
++ + + + EM+ G +V Y +I ++ + V +AL IL+ + S G KPD
Sbjct: 298 KESGYR--QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPD 355
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
V YT VL + E + + EEL E+ PD T+N + LC+Q V+ I+++
Sbjct: 356 AVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVD 415
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M E G D++TY+++L LC V ++ EL+ +K G + Y+ ++ GL S
Sbjct: 416 HMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTE 475
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
A L+ E L F+ + LCQ+GLV +A+ +++QM++ SP
Sbjct: 476 QWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSP 529
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 174/376 (46%), Gaps = 24/376 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
LL + NC P ++ ++ +L + V+DH+ E+ + + + ++
Sbjct: 378 LLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMS--EHGCVADIVTYSSILDG 435
Query: 126 YADAHRFQDSVNLFYKIPKF--RINRVGF---------------AIEILNCMINDGFCVD 168
D R D+V L ++ + + + + + A E++ M+ D
Sbjct: 436 LCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPD 495
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + +++S+C++ + D + V++M + G +V Y +I L + + DA+ +
Sbjct: 496 EVTFNTVVASLCQKGLV--DRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMEL 553
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L+ ++S G KPDIV + +L G+ + + AE+L ++ PD T+N I LC+
Sbjct: 554 LSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQ 613
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ + I+ + M E G P+ TY+ ++ AL K + EL+ M +L T
Sbjct: 614 KGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLIT 671
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ +I L G + EA LL ++ GLC ++ + G+C+ +A+ +L+++
Sbjct: 672 YNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQ 731
Query: 409 DKDVSPGARVWEALLL 424
D +SP + +LL
Sbjct: 732 DTGLSPDTTFYNDVLL 747
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 33/316 (10%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET----PEFI-FID 121
++ S C P Y+ +I L C+ S + D +E + ++ P+ + F
Sbjct: 518 VVEQMSENGCSPDIVTYNCIIDGL------CNESCIDDAMELLSDLQSCGCKPDIVTFNT 571
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
L+K R++D+ L M+ D T + +++S+C+
Sbjct: 572 LLKGLCGVDRWEDAEQLMAN------------------MMRSNCPPDELTFNTVITSLCQ 613
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+ L+ + + ++ M + G Y+ V+ +L+K K AL +L+ M + PD+
Sbjct: 614 KGLLT--QAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDL 669
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
+ Y V++ + +A +L ++ GL PD TY G+C+++ + ++M+
Sbjct: 670 ITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRR 729
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
+++ G PD YN +L C+ R + + M G + + TY I+++ LA G
Sbjct: 730 VQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGL 789
Query: 362 IIEACGLLEEALNKGL 377
+ EA LL + G+
Sbjct: 790 LDEAKRLLASLCSLGV 805
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 2/199 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ VI SL +K + A+ L M +G P+ Y++V++ ++ A EL +
Sbjct: 604 FNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMT 663
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
PD+ TYN I+ L K +E + ++ M G PD TY +L +C+ +
Sbjct: 664 --NGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTD 721
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R +++ ++ G+ + Y+ ++ G A ++ G S + +
Sbjct: 722 RAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILL 781
Query: 389 CGLCQRGLVRKALELLKQM 407
L GL+ +A LL +
Sbjct: 782 EALAYGGLLDEAKRLLASL 800
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 144/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ RV A ++L M N D + ++S + ++S + L EMK+
Sbjct: 334 KTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL--FDEMKRKKIVPD 391
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT++I L + KV +A + ++M S G+KPD V YT +++G + +A L +
Sbjct: 392 FVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHN 451
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ GL P+V TY ++GLCK V+ +++ M E G +P+V TYN L+ LCKV
Sbjct: 452 QMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVG 511
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + +L++EM G + TY+ ++D G++ +A LL L+KGL F+
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFN 571
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C G++ L+K M DK + P A + +L+
Sbjct: 572 VLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLM 609
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 156/318 (49%), Gaps = 10/318 (3%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE---ILNCMINDGFCVDGKTCSLILSS 178
LI TY D ++F+++ + G +E + + ++N G V +C+L L+
Sbjct: 170 LIYTYKDWGAHPLVFDVFFQV----LVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLAR 225
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+ D F +E ++G C+ V Y ++ L + KV +A +L QM+ G
Sbjct: 226 LSNSFDGIRTAFRVF-REYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV 284
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD+V Y+++++G E K +L +EL GL P+ YTYN I+ LCK V ++
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M+ PD + Y TL+ K ++ +L EMK K IV + TY+ MI GL
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G ++EA L E L+KGL + I G C+ G +++A L QM +K ++P
Sbjct: 405 AGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464
Query: 419 WEALL--LSSVSKLDFVN 434
+ AL+ L ++D N
Sbjct: 465 YTALVDGLCKCGEVDIAN 482
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 183/400 (45%), Gaps = 33/400 (8%)
Query: 30 HQTLDQQQAKQNV----KQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHF 85
H L Q + + NV S+ Q +Q+ K ++ L +P Y+
Sbjct: 272 HSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRK----GLKPNQYTYNS 327
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF 145
+I L + + + VL + K + ++ LI + + LF ++ +
Sbjct: 328 IISFLCKTGRVVEAEQVL-RVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK 386
Query: 146 RI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
+I + V + MI+ G C GK V E R L S EM G
Sbjct: 387 KIVPDFVTYT-----SMIH-GLCQAGK--------VVEARKLFS--------EMLSKGLK 424
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
V YT +I K ++ +A + NQM G+ P++V YT +++G+ + A EL
Sbjct: 425 PDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANEL 484
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E+ GL P+V TYN INGLCK N+E +K++ M+ G PD ITY T++ A CK
Sbjct: 485 LHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCK 544
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ E+ + EL++ M KG+ + T++++++G G + + L++ L+KG+ ++
Sbjct: 545 MGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATT 604
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F+ + C R +R +E+ K M + V P + L+
Sbjct: 605 FNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILI 644
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 4/256 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A + N M+ G + T + ++ +C+ ++ ++ELL EM + G + Y
Sbjct: 446 AFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELL---HEMSEKGLQPNVCTYNA 502
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L K + A+ ++ +M G PD + YT +++ + KA EL +L G
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P + T+NV +NG C +E G ++I M + G P+ T+N+L++ C +
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATI 622
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E+ K M +G+V + TY+I+I G ++ EA L +E + KG ++ ++ I G
Sbjct: 623 EIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGF 682
Query: 392 CQRGLVRKALELLKQM 407
+R +A +L ++M
Sbjct: 683 YKRKKFEEARKLFEEM 698
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A E+L+ M G + T + +++ +C+ ++ ++ + ++EM GF + Y
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNI--EQAVKLMEEMDLAGFFPDTITY 535
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T ++ + K ++ A +L M G++P IV + +++NG + E L +L
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G++P+ T+N + C +NN+ A I++ M G PD TYN L++ CK R +
Sbjct: 596 KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKE 655
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L KEM KG L +Y+ +I G + EA L EE G + ++D +
Sbjct: 656 AWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVD 715
Query: 390 GLCQRGLVRKALELLKQMADK 410
+ G LEL + +K
Sbjct: 716 VNYEEGNWENTLELCDEAIEK 736
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 109/237 (45%), Gaps = 4/237 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCF 204
++ + A++++ M GF D T + I+ + C+ +++ + ELL + M G
Sbjct: 509 KVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL---RIMLDKGLQP 565
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V + ++ + D ++ M GI P+ + ++ ++ + E++
Sbjct: 566 TIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIY 625
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ G+VPD TYN+ I G CK N++ + M E G +YN+L++ K
Sbjct: 626 KGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKR 685
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
++ R+L +EM+ G + + Y I +D +G+ L +EA+ K L ++
Sbjct: 686 KKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLVKKT 742
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 146/282 (51%), Gaps = 10/282 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A++I M + G D + S ++ + + D + +++EM+ CFG
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM--DHAMAYLREMR----CFG 265
Query: 206 MVD----YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V YT VI + + DAL + ++M G PD+V Y +LNG+ + + AE
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
L +E+ G+ PD+ T+ I+G C + ++ +++ M +PD++TYNTL+ +
Sbjct: 326 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 385
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ +L++ +L +M + I N TYSI+ID KG + +A G L+E +NKG+
Sbjct: 386 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 445
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G C+ G V K + L++M VSP + L+
Sbjct: 446 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 487
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 167/369 (45%), Gaps = 21/369 (5%)
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
PH+ + N E + ++ + +F + +V+ +EKR F P+ +
Sbjct: 76 PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVF--PDVVTH 133
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+++ DA +FR A+ +++ M++ G T + +L +C
Sbjct: 134 NVM---VDA--------------RFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 176
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
R D+ +EM G + +T +I + ++ +AL I +M+ GIKPD
Sbjct: 177 --RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPD 234
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+V ++ ++ + A E+ GLVPD Y + I G C+ + +++
Sbjct: 235 LVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRD 294
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M G PDV+TYNTLL LCK R L L+ EM+ +G+ +L T++ +I G +G
Sbjct: 295 EMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEG 354
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+ +A L + LN+ L ++ I G+C++G + KA +L M +++ P +
Sbjct: 355 KLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYS 414
Query: 421 ALLLSSVSK 429
L+ S K
Sbjct: 415 ILIDSHCEK 423
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A+ L M G DG ++++ C + L SD L EM G
Sbjct: 247 RRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFC-RAGLMSDALR-VRDEMVGCGCLPD 304
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ L K+ ++ DA G+LN+M+ G+ PD+ +T +++G ++ KA +LFD
Sbjct: 305 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 364
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L L PD+ TYN I+G+C+Q +++ + M P+ +TY+ L+ + C+
Sbjct: 365 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 424
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + EM KGI+ N+ TY+ +I G G++ + L++ + + ++
Sbjct: 425 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 484
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + + A +LL M + V P + L+
Sbjct: 485 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 522
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 149/334 (44%), Gaps = 29/334 (8%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQ 133
C P Y+ ++ L + + D +L+ E RE P+ F LI Y +
Sbjct: 300 GCLPDVVTYNTLLNGLCKERRLLDAEGLLN--EMRERGVPPDLCTFTTLIHGYCIEGKLD 357
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++ LF + M+N D T + ++ +C Q DL D+
Sbjct: 358 KALQLF------------------DTMLNQRLRPDIVTYNTLIDGMCRQGDL--DKANDL 397
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+M V Y+ +I S +K +V DA G L++M + GI P+I+ Y ++ G
Sbjct: 398 WDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCR 457
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ K ++ +++V + PD+ TYN I+G K++ + K++ ME+ +PDV+T
Sbjct: 458 SGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVT 517
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN L+ + + ++M KGI + TY MI+G + G+ EA L +E L
Sbjct: 518 YNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 577
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+G + + G Q ++ + E LKQM
Sbjct: 578 QRGKEKRRA------AGTVQFVNIQNSAESLKQM 605
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 163/348 (46%), Gaps = 25/348 (7%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRI--------------NRVGF---AIEILNCM 160
+F LI+TY + + +++ F I R+ +R G+ A + +
Sbjct: 27 VFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLV 86
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
+ V+ T ++++ + C+ L D++ + EM+K +V + ++ + +
Sbjct: 87 FSSNSEVNTYTLNIMVHNYCKA--LEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 144
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
A+ +++ M S G+KP IV Y VL G+ + KA E+F E+ G+ PDV ++
Sbjct: 145 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 204
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+ I G C+ +E +K+ M G KPD+++++ L+ + +++ ++EM+
Sbjct: 205 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 264
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G+V + Y+++I G G + +A + +E + G ++ + GLC+ + A
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 324
Query: 401 LELLKQMADKDVSPGARVWEALLLSSV--SKLDFVNTSFIRLVDQILN 446
LL +M ++ V P + L+ KLD ++L D +LN
Sbjct: 325 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLD----KALQLFDTMLN 368
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 37/290 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + + M+ G D T + +L+ +C++R L E G + EM++ G + +T +
Sbjct: 289 ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE--GLLNEMRERGVPPDLCTFTTL 346
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD------- 265
I + K+ AL + + M + ++PDIV Y +++G+ Q D KA +L+D
Sbjct: 347 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI 406
Query: 266 ----------------------------ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
E++ G++P++ TYN I G C+ NV G K
Sbjct: 407 FPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK 466
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M PD+ITYNTL+ K +++ +L+ M+ + + ++ TY+++I+G +
Sbjct: 467 FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFS 526
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G++ EA + E+ KG+ + I G G ++A +L +M
Sbjct: 527 VHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 139/272 (51%), Gaps = 9/272 (3%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQ---RDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
+L M GFC+D TC++I+ C++ RD+S + M ++G +V+YT
Sbjct: 207 LLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSE-----LFRRMLEMGTPPNVVNYTAW 261
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLG 271
I L K+ V A +L +M + G+KP++ +T ++NG+ +A LF +L+
Sbjct: 262 IDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSS 321
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+V+TY V I G CK+ + ++ M E G P+ TY TL+ CK N
Sbjct: 322 YKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAF 381
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL+ +M+ +G N+ TY+ +IDGL KG I EA +L A N+GL + I
Sbjct: 382 ELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEH 441
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G + AL+L +MA+ P + L+
Sbjct: 442 CKQGHITYALDLFNRMAENGCHPDIHTYTTLI 473
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 142/345 (41%), Gaps = 53/345 (15%)
Query: 122 LIKTYADAHRFQDSVNLFYKI-----PKFRINRVGF------------AIEILNCMINDG 164
+++ + RF+D LF ++ P +N + A +L M+ G
Sbjct: 226 IVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKG 285
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
+ T + +++ +C+ + F++ +K + + YT +I K+ K+
Sbjct: 286 LKPNVYTHTSLINGLCKI-GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLAR 344
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L +M G+ P+ YT +++G + + A EL +++ G P++YTYN I+
Sbjct: 345 AEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALID 404
Query: 285 GLCKQNNVEAGIKMIAC-----------------------------------MEELGSKP 309
GLCK+ ++ K++ M E G P
Sbjct: 405 GLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHP 464
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
D+ TY TL+ C+ R++ ++L + +V QTY+ MI G G A +
Sbjct: 465 DIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVF 524
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
E + G S + I GLC+ + +A L + M DK + P
Sbjct: 525 ERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVP 569
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 2/214 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ + + ++ +A ++ +M+S G+ + VL + + A ++FD ++ G
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179
Query: 272 -LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
L+PD ++ I G C+ +E ++ M+ G D T +++ C+ +
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL + M G N+ Y+ IDGL + + +A +LEE + KGL I G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299
Query: 391 LCQRGLVRKALEL-LKQMADKDVSPGARVWEALL 423
LC+ G +A L LK + P + ++
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 333
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 68/271 (25%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-------GFCFG 205
A E++N M +GF + T + ++ +C++ G +QE K+ G
Sbjct: 380 AFELMNKMRREGFQPNIYTYNALIDGLCKK---------GKIQEAYKVLRMANNQGLQLD 430
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT +I K+ + AL + N+M +G PDI YT ++ Q ++++LFD
Sbjct: 431 KVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFD 490
Query: 266 ELLVLGLVP-----------------------------------DVYTYNVYINGLCKQN 290
+ L + LVP D TY I+GLCK++
Sbjct: 491 KCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKES 550
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCK-------VRELNRLRELVKEMKWKGIV 343
+E + M + P +T TL C+ V L+RL + K
Sbjct: 551 RLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRKN------- 603
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
T ++++ L++ G + +A L++AL+
Sbjct: 604 ---HTVNVLVRKLSAIGHVEDASLFLKKALD 631
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 153/296 (51%), Gaps = 11/296 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A++I M + G D + S ++ + + D + +++EM+ CFG
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM--DHAMAYLREMR----CFG 326
Query: 206 MVD----YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V YT VI + + DAL + ++M G PD+V Y +LNG+ + + AE
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 386
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
L +E+ G+ PD+ T+ I+G C + ++ +++ M +PD++TYNTL+ +
Sbjct: 387 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 446
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ +L++ +L +M + I N TYSI+ID KG + +A G L+E +NKG+
Sbjct: 447 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 506
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I G C+ G V K + L++M VSP + L+ + K D ++ +F
Sbjct: 507 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYI-KEDKMHDAF 561
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 167/369 (45%), Gaps = 21/369 (5%)
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
PH+ + N E + ++ + +F + +V+ +EKR F P+ +
Sbjct: 137 PHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVF--PDVVTH 194
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+++ DA +FR A+ +++ M++ G T + +L +C
Sbjct: 195 NVM---VDA--------------RFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 237
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
R D+ +EM G + +T +I + ++ +AL I +M+ GIKPD
Sbjct: 238 --RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPD 295
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+V ++ ++ + A E+ GLVPD Y + I G C+ + +++
Sbjct: 296 LVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRD 355
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M G PDV+TYNTLL LCK R L L+ EM+ +G+ +L T++ +I G +G
Sbjct: 356 EMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEG 415
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+ +A L + LN+ L ++ I G+C++G + KA +L M +++ P +
Sbjct: 416 KLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYS 475
Query: 421 ALLLSSVSK 429
L+ S K
Sbjct: 476 ILIDSHCEK 484
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A+ L M G DG ++++ C + L SD L EM G
Sbjct: 308 RRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFC-RAGLMSDALR-VRDEMVGCGCLPD 365
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ L K+ ++ DA G+LN+M+ G+ PD+ +T +++G ++ KA +LFD
Sbjct: 366 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 425
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L L PD+ TYN I+G+C+Q +++ + M P+ +TY+ L+ + C+
Sbjct: 426 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 485
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + EM KGI+ N+ TY+ +I G G++ + L++ + + ++
Sbjct: 486 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 545
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + + A +LL M + V P + L+
Sbjct: 546 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 583
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 37/297 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + + M+ G D T + +L+ +C++R L E G + EM++ G + +T +
Sbjct: 350 ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE--GLLNEMRERGVPPDLCTFTTL 407
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD------- 265
I + K+ AL + + M + ++PDIV Y +++G+ Q D KA +L+D
Sbjct: 408 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI 467
Query: 266 ----------------------------ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
E++ G++P++ TYN I G C+ NV G K
Sbjct: 468 FPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK 527
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M PD+ITYNTL+ K +++ +L+ M+ + + ++ TY+++I+G +
Sbjct: 528 FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFS 587
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G++ EA + E+ KG+ + I G G ++A +L +M + +P
Sbjct: 588 VHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 163/348 (46%), Gaps = 25/348 (7%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRI--------------NRVGF---AIEILNCM 160
+F LI+TY + + +++ F I R+ +R G+ A + +
Sbjct: 88 VFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLV 147
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
+ V+ T ++++ + C+ L D++ + EM+K +V + ++ + +
Sbjct: 148 FSSNSEVNTYTLNIMVHNYCKA--LEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 205
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
A+ +++ M S G+KP IV Y VL G+ + KA E+F E+ G+ PDV ++
Sbjct: 206 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 265
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+ I G C+ +E +K+ M G KPD+++++ L+ + +++ ++EM+
Sbjct: 266 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 325
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G+V + Y+++I G G + +A + +E + G ++ + GLC+ + A
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 385
Query: 401 LELLKQMADKDVSPGARVWEALLLSSV--SKLDFVNTSFIRLVDQILN 446
LL +M ++ V P + L+ KLD ++L D +LN
Sbjct: 386 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLD----KALQLFDTMLN 429
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 137/304 (45%), Gaps = 23/304 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQ 133
C P Y+ ++ L + + D +L+ E RE P+ F LI Y +
Sbjct: 361 GCLPDVVTYNTLLNGLCKERRLLDAEGLLN--EMRERGVPPDLCTFTTLIHGYCIEGKLD 418
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++ LF + M+N D T + ++ +C Q DL D+
Sbjct: 419 KALQLF------------------DTMLNQRLRPDIVTYNTLIDGMCRQGDL--DKANDL 458
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+M V Y+ +I S +K +V DA G L++M + GI P+I+ Y ++ G
Sbjct: 459 WDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCR 518
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ K ++ +++V + PD+ TYN I+G K++ + K++ ME+ +PDV+T
Sbjct: 519 SGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVT 578
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN L+ + + ++M KGI + TY MI+G + G+ EA L +E L
Sbjct: 579 YNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 638
Query: 374 NKGL 377
+G
Sbjct: 639 QRGF 642
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A L+ MIN G + T + I+ C ++S + F+Q+M ++ Y +
Sbjct: 490 AFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ--KFLQKMMVNKVSPDLITYNTL 547
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +K++K+ DA +LN M+ + ++PD+V Y M++NG V + +A +F+++ G+
Sbjct: 548 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 607
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
PD YTY ING N + ++ M + G PD
Sbjct: 608 EPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 140/298 (46%), Gaps = 22/298 (7%)
Query: 111 NFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAI-EILNCMINDGFCVDG 169
FE + + +I Y QD+ N K F+ GF E C + +GFC DG
Sbjct: 290 GFEPDDLTYNSIIDGYCKKGMVQDA-NRVLKDAVFK----GFKPDEFTYCSLINGFCKDG 344
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
D + ++ G +V Y +I+ L ++ + AL ++
Sbjct: 345 ----------------DPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLM 388
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
N+M +G P+I Y +V+NG+ A L D+ + G PD++TYN I+G CKQ
Sbjct: 389 NEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQ 448
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+++ +M+ M G PDVITYNTLL LCK + + E+ K M+ KG N+ TY
Sbjct: 449 LKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITY 508
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+I++D L + EA LL E +KGL F G C+ G + A +L ++M
Sbjct: 509 NIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 164/366 (44%), Gaps = 23/366 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTY---ADAHR- 131
EP Y+ +I + D + VL D + K F+ EF + LI + D R
Sbjct: 292 EPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFK--GFKPDEFTYCSLINGFCKDGDPDRA 349
Query: 132 ---FQDSVN-------LFYKIPKFRINRVGF---AIEILNCMINDGFCVDGKTCSLILSS 178
F+D + + Y +++ G A++++N M +G + T +L+++
Sbjct: 350 MAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVING 409
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C+ +S L V + G + Y +I K+ K+ A ++N+M S G+
Sbjct: 410 LCKMGCVSDASHL--VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMT 467
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD++ Y +LNG+ + E+F + G P++ TYN+ ++ LCK V + +
Sbjct: 468 PDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDL 527
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM-KWKGIVLNLQTYSIMIDGLA 357
+ M+ G KPDV+++ TL CK+ +++ +L + M K + TY+I++ +
Sbjct: 528 LGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFS 587
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ ++ A L N G + + I G C+ G + + + L + +K P
Sbjct: 588 EQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLT 647
Query: 418 VWEALL 423
+ +L
Sbjct: 648 TFGRVL 653
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 167/378 (44%), Gaps = 31/378 (8%)
Query: 73 IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRF 132
YNC+P +++ ++ L E V + R ++ + + IK++ R
Sbjct: 104 FYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDR-GVQSDVYTYTIRIKSFCKTARP 162
Query: 133 QDSVNLFYKIPKFRI--NRVGF---------------AIEILNCMINDGFCVDGKTCSLI 175
++ L +P+ N V + A E+ + M+ C D + +
Sbjct: 163 YAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKL 222
Query: 176 LSSVCEQR-DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL---------VKKEKVFDA 225
+ +C++ S+ LLG V K G C + + ++ L V+ +V +A
Sbjct: 223 VHVLCKKGLVFESERLLGKVL---KRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEA 279
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
L +M + G +PD + Y +++G + A + + + G PD +TY ING
Sbjct: 280 EEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLING 339
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
CK + + + + G +P ++ YNTL++ L + + +L+ EM G + N
Sbjct: 340 FCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPN 399
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ TY+++I+GL G + +A L+++A+ KG ++ I G C++ + A E++
Sbjct: 400 IWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVN 459
Query: 406 QMADKDVSPGARVWEALL 423
+M + ++P + LL
Sbjct: 460 RMWSQGMTPDVITYNTLL 477
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 118/230 (51%), Gaps = 3/230 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++N M + G D T + +L+ +C+ S+E++ + M++ G ++ Y +
Sbjct: 454 ATEMVNRMWSQGMTPDVITYNTLLNGLCKAG--KSEEVMEIFKAMEEKGCTPNIITYNII 511
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL-LVLG 271
+ SL K +KV +A+ +L +MKS G+KPD+V + + G D A +LF +
Sbjct: 512 VDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYD 571
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ TYN+ ++ +Q N+ +K+ + M+ G PD TY ++ CK+ + +
Sbjct: 572 VCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGY 631
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
+ + E K + +L T+ +++ L K + EA G++ L KG+ ++
Sbjct: 632 KFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPET 681
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 107/224 (47%), Gaps = 9/224 (4%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +++ +K KV +A+ +M P + + ++N ++ + +A +++ +
Sbjct: 79 YIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMR 138
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ DVYTY + I CK A ++++ M ELG + + Y T++ L E +
Sbjct: 139 DRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHD 198
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
REL EM + + ++ ++ ++ L KG + E+ LL + L +G+C F+ +
Sbjct: 199 HARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFV 258
Query: 389 CGLCQRGLVRKAL---------ELLKQMADKDVSPGARVWEALL 423
GLC+ G + +A+ E L++M + P + +++
Sbjct: 259 QGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +V A+++L M + G D + + + C+ D+ L F + K+ C
Sbjct: 517 KAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQL-FRRMEKQYDVCHT 575
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y ++ + ++ + A+ + + MK+ G PD Y +V++G + + +
Sbjct: 576 TATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLL 635
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E + +P + T+ +N LC ++ V + +I M + G P+ T NT+ +A KV
Sbjct: 636 ENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE--TVNTIFEADKKVV 693
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
++ LV+++ KG + TY ++ DG+ K
Sbjct: 694 AAPKI--LVEDLLKKGHIA-YYTYELLYDGIRDK 724
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 147/281 (52%), Gaps = 4/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E+L + GF D T CSLI + +C + D+ + L E + +V Y +
Sbjct: 334 ATELLKDAVFKGFVPDRVTYCSLI-NGLCAEGDI--ERALELFNEAQAKDLKPDLVVYNS 390
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+++ L ++ + AL ++N+M +G PDI Y +++NG+ + A + ++ +V G
Sbjct: 391 LVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKG 450
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+PDV+T+N I+G CK+ +++ ++++ M G PDVITYN++L LCK + +
Sbjct: 451 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVN 510
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E +EM KG N TY+I+I+ + EA G++ GL + F+ I G
Sbjct: 511 ETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGF 570
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
C+ G + A L +++ +K S A + L+ + SKL+
Sbjct: 571 CRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNM 611
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 179/385 (46%), Gaps = 26/385 (6%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-I 118
+PH+ LL S S C+ P AY V++ L + + + D + R+ F P+
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVF--PDVAT 213
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
F +++ +S L K+ K G + TC++ +
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLK------------------RGMSANKFTCNIWIRG 255
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+CE L +E + V+ M +V Y ++R L K KV +A L +M + G
Sbjct: 256 LCEDGRL--EEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI 312
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD Y +++G +A EL + + G VPD TY INGLC + ++E +++
Sbjct: 313 PDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALEL 372
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ KPD++ YN+L++ LC+ + +++ EM +G ++ TY+I+I+GL
Sbjct: 373 FNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCK 432
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G+I +A ++ +A+ KG F+ I G C+R + AL+L+++M ++P
Sbjct: 433 MGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVIT 492
Query: 419 WEALL--LSSVSKLDFVNTSFIRLV 441
+ ++L L K VN +F ++
Sbjct: 493 YNSVLNGLCKAGKAKEVNETFEEMI 517
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++++N M+ +G D T ++I++ +C+ ++S ++ + + G+ + + +
Sbjct: 404 ALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVV--MNDAIVKGYLPDVFTFNTL 461
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ K+ AL ++ +M + GI PD++ Y VLNG+ + E F+E+++ G
Sbjct: 462 IDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGC 521
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN+ I CK N +E +I M + G PD +++NTL+ C+ +L+
Sbjct: 522 RPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYL 581
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +++ KG T++I+I +SK ++ A + E ++KG + + GLC
Sbjct: 582 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLC 641
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ V +A L +M K P + +L
Sbjct: 642 KAANVDRAYAHLAEMISKGFVPSMATFGRML 672
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 107/237 (45%), Gaps = 3/237 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y I++ + ++ A+ +M P Y +++ ++ + +A +++ +L
Sbjct: 74 YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ PD T+ V + C ++++ + E G Y T+++ L
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R L EM + + ++ T++ ++ L KGD++E+ LL + L +G+ + I
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
GLC+ G + +A+ L+++M V+P + L+ L SK+ R+++Q
Sbjct: 254 RGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ 309
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 7/211 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+IN++ A ++ M DG D + + ++ C DL LL Q++ + G+
Sbjct: 537 KINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLL--FQKLDEKGYSAT 594
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +I + K + A I +M S G KPD+ Y ++++G+ + +A
Sbjct: 595 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLA 654
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G VP + T+ +N L + V + +I M +G P+V+ +T+L +
Sbjct: 655 EMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILST--DKK 710
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
E+ + LV+E+ KG + + + Y ++ +G+
Sbjct: 711 EIAAPKILVEELMKKGHI-SYRAYEVLHEGV 740
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 3/207 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV--CYTMVLNGVIVQEDYVKAEELFDE 266
Y +IR LV ++ D L +S + PD + Y + A + F+
Sbjct: 38 YRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + P YN ++ L + K+ M G PD T+ L++ C
Sbjct: 97 MDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGR 156
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ L++ + +G Y ++ GL + G A L +E L + + + F+
Sbjct: 157 PHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNN 216
Query: 387 TICGLCQRGLVRKALELLKQMADKDVS 413
+ LCQ+G V ++ LL ++ + +S
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMS 243
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 191/440 (43%), Gaps = 40/440 (9%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
M + A+++A + ++P + ++ ++NV++ +++ I
Sbjct: 360 MSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVIS 419
Query: 61 PHILSSLLHSF-------SIYN---------CEPPPEAYHFVIKTLAENSQFCDISSVLD 104
P+ + + YN C P Y +IKT + S+F D VL
Sbjct: 420 PYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLK 479
Query: 105 HIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMIND 163
E RE P+ F + LI + A + ++ + F +E M+ +
Sbjct: 480 --EMREQGIAPDTFCYNSLIIGLSKAKKMDEARS--------------FLLE----MVEN 519
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF D T +S E + +S + +V+EM + G V T +I KK KV
Sbjct: 520 GFKPDAFTYGAFISGYIEAGEFASAD--KYVKEMLECGVIPNKVLCTGLINEYCKKGKVI 577
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A M GI D YT+++NG++ AEE+F E+ G+ PDV++Y I
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLI 637
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G K N++ + M + G +VI YN LL C+ E+ + +EL+ EM KG
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N TY +IDG GD+ EA L +E KGL S ++ + G C+ V +A+ +
Sbjct: 698 PNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 757
Query: 404 LKQMADKDVSPGARVWEALL 423
+ +K + + + AL+
Sbjct: 758 F-ETNEKGCASSSAPFNALI 776
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 162/350 (46%), Gaps = 23/350 (6%)
Query: 112 FETPEFIFIDLIKTYADAHRFQDSV------NLFYKIPKFRINR-VGFAIEILNCMINDG 164
F + + + +DL+ + A + D++ +LF+ + K + R V F ++ +I
Sbjct: 175 FSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIG-A 233
Query: 165 FCVDG-----KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV----DYTNVIRS 215
C DG K L L+ DE L E+KK C G+V Y +I
Sbjct: 234 HCRDGNVQLAKDVLLKTEEELGTATLNVDEAL----ELKKSMSCKGLVPSRQSYNLLIDG 289
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K++++ DA +L +M S G+ D V Y+++++G++ + A L E++ G D
Sbjct: 290 LCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSID 349
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
Y+ +I + K+ +E + M G P Y +L++ + + + + EL+
Sbjct: 350 PMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLV 409
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
E+K + IV++ TY + G+ S GD+ A +++E G ++ I Q+
Sbjct: 410 EIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKS 469
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
A+ +LK+M ++ ++P + +L+ LS K+D + + +V+
Sbjct: 470 RFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVEN 519
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM + G ++ Y ++ + ++ A +L++M G P+ V Y +++G
Sbjct: 655 EMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSG 714
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME------------ 303
D +A +LFDE+ + GLVPD + Y ++G C+ N+VE I + E
Sbjct: 715 DLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNA 774
Query: 304 -----------ELGS---------------KPDVITYNTLLQALCKVRELNRLRELVKEM 337
EL + KP+ +TYN ++ LCK L +EL M
Sbjct: 775 LINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHM 834
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ ++ + TY+ +++G G E + +E + G+ + M+ I + G+
Sbjct: 835 QKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMT 894
Query: 398 RKALELLKQMADKDV 412
KAL LL QM K+
Sbjct: 895 TKALVLLDQMFAKNA 909
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 2/283 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M G ++ +L++ +C+Q+ L + L + EM +G V Y+ +
Sbjct: 264 ALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSL--LVEMNSVGLFADNVAYSIL 321
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L+K A G++++M S G D + Y + + + KA+ LFD ++ G+
Sbjct: 322 IDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGV 381
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P Y I G ++ NV G +++ +++ TY T ++ +C +L+
Sbjct: 382 TPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYN 441
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+VKEM G N+ Y+ +I K +A +L+E +G+ + ++ I GL
Sbjct: 442 IVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLS 501
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
+ + +A L +M + P A + A + + +F +
Sbjct: 502 KAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASA 544
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 2/251 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G D S+++ + + R+ +D G V EM GF + Y I + K+ +
Sbjct: 310 GLFADNVAYSILIDGLLKGRN--ADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAME 367
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A + + M + G+ P Y ++ G +++ K EL E+ +V YTY +
Sbjct: 368 KAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAV 427
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
G+C +++ ++ M G +P+V+ Y TL++ + ++KEM+ +GI
Sbjct: 428 KGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIA 487
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ Y+ +I GL+ + EA L E + G + + I G + G A +
Sbjct: 488 PDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKY 547
Query: 404 LKQMADKDVSP 414
+K+M + V P
Sbjct: 548 VKEMLECGVIP 558
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 42/262 (16%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A I + M+ G + +++L C ++ + ELL EM GF V Y
Sbjct: 649 ASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELL---DEMSGKGFPPNAVTYCT 705
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE----- 266
+I K + +A + ++MK G+ PD YT +++G D +A +F+
Sbjct: 706 IIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGC 765
Query: 267 -------------LLVLGLV--------------------PDVYTYNVYINGLCKQNNVE 293
+ G P+ TYN+ I+ LCK+ N+E
Sbjct: 766 ASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLE 825
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
A ++ M++ P VITY +LL K+ + + + E+ GI + YS++I
Sbjct: 826 AAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVII 885
Query: 354 DGLASKGDIIEACGLLEEALNK 375
+ +G +A LL++ K
Sbjct: 886 NAFLKEGMTTKALVLLDQMFAK 907
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 182/377 (48%), Gaps = 29/377 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + C P E ++ VI L + + + + +++ + R F + + L+
Sbjct: 268 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFTPDDITYGYLMNGL 326
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK------------TCSL 174
R + +LFY+IPK I N +I+ GF G+ T
Sbjct: 327 CKIGRVDAAKDLFYRIPKP-------TSVIFNTLIH-GFVTHGRLDDAKAVLSDMVTSYG 378
Query: 175 ILSSVCEQRDL----SSDELLGF----VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
I+ VC L L+G +++M+ G + YT ++ K K+ +A
Sbjct: 379 IVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 438
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+LN+M +DG+KP+ V + +++ + +A E+F E+ G PDVYT+N I+GL
Sbjct: 439 NLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 498
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C+ + ++ + ++ M G + +TYNTL+ A + E+ R+LV EM ++G +L+
Sbjct: 499 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDE 558
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +I GL G++ +A L E+ L GL S + I GLC+ G+V +A+E K+
Sbjct: 559 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKE 618
Query: 407 MADKDVSPGARVWEALL 423
M + +P + +L+
Sbjct: 619 MVLRGSTPDIVTFNSLI 635
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 139/274 (50%), Gaps = 2/274 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
VG A+E+L M N G + + ++++ C+ + DE + EM G V +
Sbjct: 399 VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKI--DEAYNLLNEMSADGLKPNTVGF 456
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I + K+ ++ +A+ I +M G KPD+ + +++G+ ++ A L +++
Sbjct: 457 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 516
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+V + TYN IN ++ ++ K++ M GS D ITYN+L++ LC+ E+++
Sbjct: 517 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDK 576
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
R L ++M G+V + + +I+I+GL G + EA +E + +G F+ I
Sbjct: 577 ARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 636
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G + L + +++ + + P + L+
Sbjct: 637 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLM 670
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 185/432 (42%), Gaps = 83/432 (19%)
Query: 67 LLHSFSIYNCEP---------------------------------PPEAYHF--VIKTLA 91
+L ++Y+CEP PP + F V+K L
Sbjct: 163 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALC 222
Query: 92 ENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK------IPKF 145
++ SVL + K I+ LI + + +R +++ L + +P
Sbjct: 223 AVNEVDSALSVLRDMTKHGCVPN-SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 281
Query: 146 -----------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELL- 191
+ +R+ A +++N M+ GF D T +++ +C+ + D + D
Sbjct: 282 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYR 341
Query: 192 --------------GFVQE---------MKKLGFCFGMV----DYTNVIRSLVKKEKVFD 224
GFV + + +G+V Y ++I KK V
Sbjct: 342 IPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGL 401
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
AL +L M++ G KP++ YT++++G +A L +E+ GL P+ +N I+
Sbjct: 402 ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLIS 461
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
CK++ + +++ M G KPDV T+N+L+ LC+V E+ L+++M +G+V
Sbjct: 462 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 521
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N TY+ +I+ +G+I EA L+ E + +G ++ I GLC+ G V KA L
Sbjct: 522 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLF 581
Query: 405 KQMADKDVSPGA 416
++M + P +
Sbjct: 582 EKMLRDGLVPSS 593
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 144/303 (47%), Gaps = 21/303 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C+P +Y ++ + + + ++L+ + + + F LI + HR +
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSA-DGLKPNTVGFNCLISAFCKEHRIPE 471
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+V +F ++P+ G D T + ++S +CE ++ L +
Sbjct: 472 AVEIFREMPR------------------KGCKPDVYTFNSLISGLCEVDEIK--HALWLL 511
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M G V Y +I + +++ ++ +A ++N+M G D + Y ++ G+
Sbjct: 512 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRA 571
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ KA LF+++L GLVP + N+ INGLC+ VE ++ M GS PD++T+
Sbjct: 572 GEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 631
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N+L+ LC+ + + ++++ +GI + TY+ ++ L G + +AC LL+E +
Sbjct: 632 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIE 691
Query: 375 KGL 377
G
Sbjct: 692 DGF 694
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 180/416 (43%), Gaps = 58/416 (13%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+ Y +I L N +F I +L + K E E +FI +++ Y A + L
Sbjct: 106 DVYQVLIGKLGSNGEFKTIDRLLMQM-KDEGIVFKESLFISIMRDYDKAGFPGQTTRLML 164
Query: 141 KI-------PKFRINRVGFAIEIL---NC----------MINDGFCVDGKTCSLILSSVC 180
++ P F+ V +EIL NC M++ T +++ ++C
Sbjct: 165 EMRNVYSCEPTFKSYNV--VLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALC 222
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
++ D L +++M K G V Y +I SL K +V +AL +L +M G PD
Sbjct: 223 AVNEV--DSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 280
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI- 299
+ V+ G+ + +A ++ + +L+ G PD TY +NGLCK V+A +
Sbjct: 281 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFY 340
Query: 300 ---------------------------ACMEEL----GSKPDVITYNTLLQALCKVRELN 328
A + ++ G PDV TYN+L+ K +
Sbjct: 341 RIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVG 400
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E++++M+ KG N+ +Y+I++DG G I EA LL E GL + F+ I
Sbjct: 401 LALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLI 460
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
C+ + +A+E+ ++M K P + + L+S + ++D + + L D I
Sbjct: 461 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS-LISGLCEVDEIKHALWLLRDMI 515
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 136/284 (47%), Gaps = 2/284 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ ++ A +LN M DG + + ++S+ C++ + E + +EM + G
Sbjct: 430 KLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIP--EAVEIFREMPRKGCKPD 487
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ + ++I L + +++ AL +L M S+G+ + V Y ++N + + + +A +L +
Sbjct: 488 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 547
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G + D TYN I GLC+ V+ + M G P I+ N L+ LC+
Sbjct: 548 EMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSG 607
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ E KEM +G ++ T++ +I+GL G I + + + +G+ + ++
Sbjct: 608 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYN 667
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ LC+ G V A LL + + P R W LL S V +
Sbjct: 668 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQ 711
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 129/234 (55%), Gaps = 3/234 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVL 270
V++S + + AL I+N KS G P ++ Y +L+ VI + VK AE +F E++
Sbjct: 138 VVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ P+VYTYN+ I G C N+E G+ ME G P+V+TYNT++ A CK+R++
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L++ M KG+ NL +Y+++I+GL +G + E +LEE + F+ I G
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
C G +AL L +M +SP + L++S+ K +N + + +DQ+
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTT-LINSMCKAGNLNRA-MEFLDQM 369
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 160/355 (45%), Gaps = 26/355 (7%)
Query: 72 SIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHR 131
S Y C+ + V+K+ A R N ++L K+Y
Sbjct: 124 SYYQCKSSSAVFDLVVKSCA-----------------RVNLINKALSIVNLAKSYG---- 162
Query: 132 FQDSVNLFYKIPKFRI---NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD 188
F V + I I V A I M+ G + T ++++ C +L
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
L F EM++ G +V Y +I + K K+ +A +L M G+ P+++ Y +V+
Sbjct: 223 --LXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVI 280
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG+ + + E+ +E+ VPD T+N ING C N + + A M + G
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+V+TY TL+ ++CK LNR E + +M+ +G+ N +TY+ +IDG + +G + +A +
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++E + G ++ I G C G + A LL++M ++ P + ++
Sbjct: 401 MKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTII 455
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 2/269 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
EIL M + D T + +++ C + + L EM K G +V YT +I
Sbjct: 294 EILEEMSKRRYVPDRVTFNTLINGYCNVGNF--HQALVLHAEMVKNGLSPNVVTYTTLIN 351
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
S+ K + A+ L+QM+ G+ P+ YT +++G Q +A ++ E++ G P
Sbjct: 352 SMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTP 411
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ TYN ING C +E ++ M E G PDV++Y+T++ C+ +EL + +L
Sbjct: 412 TIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLK 471
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
EM KGI ++ TYS +I GL + + E C L +E L+ GL + I C
Sbjct: 472 VEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIE 531
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G + KAL L +M K SP + L+
Sbjct: 532 GDLDKALRLHDEMIQKGFSPDIVTYNVLI 560
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 163/357 (45%), Gaps = 21/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL ++ P +Y+ VI L Q + S +L+ + KR + F LI Y
Sbjct: 260 LLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR-YVPDRVTFNTLINGY 318
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ F ++ L + M+ +G + T + +++S+C+ +L
Sbjct: 319 CNVGNFHQALVLHAE------------------MVKNGLSPNVVTYTTLINSMCKAGNL- 359
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ + F+ +M+ G YT +I ++ + A I+ +M +G P I+ Y
Sbjct: 360 -NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG + A L E++ G +PDV +Y+ I+G C+ +E ++ M G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PDV TY++L+Q LCK R L + +L +EM G+ + TY+ +I+ +GD+ +A
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E + KG ++ I G ++ ++A LL ++ ++ P + L+
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 128/318 (40%), Gaps = 52/318 (16%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ A +L MI GF D + S I+S C ++L ++ EM G +
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL--EKAFQLKVEMVAKGISPDV 483
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y+++I+ L K+ ++ + + +M S G+ PD V YT ++N ++ D KA L DE
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL-------- 318
++ G PD+ TYNV ING KQ+ + +++ + S P+ ITYNTL+
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEF 603
Query: 319 ------------------------------------------QALCKVRELNRLRELVKE 336
KV + + L KE
Sbjct: 604 KSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKE 663
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M G + T + L +G +E LL+ L T++++ I + G
Sbjct: 664 MLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGN 723
Query: 397 VRKALELLKQMADKDVSP 414
+ +LK MA + P
Sbjct: 724 MDAVFNVLKDMALSGLLP 741
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 172/380 (45%), Gaps = 54/380 (14%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P + Y F +IK S+ S I K F+ F L+ R +++
Sbjct: 109 PCDVYSFNILIKCFCSCSKLPFALSTFGKITKL-GFQPDVVTFSTLLHGLCVEDRVSEAL 167
Query: 137 NLFYKIPK-------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+LF+++ + R RV A+ +L+ M+ DG + T I+ +C+
Sbjct: 168 DLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227
Query: 184 D-LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD-- 240
D +S+ LL ++EM + +V Y+ +I L K + DA + +M+ GI PD
Sbjct: 228 DTVSALNLLRKMEEMSHIKP--NVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLF 285
Query: 241 ---------------------------------IVCYTMVLNGVIVQEDYVKAEELFDEL 267
+V Y+ ++N + + + +AEEL+DE+
Sbjct: 286 TYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEM 345
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G++P+ TYN I+G CKQN ++A M M G PDV T+NTL+ C + +
Sbjct: 346 LPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRI 405
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ EL+ EM G+V + TY+ +I G GD+ A L ++ ++ G+C +
Sbjct: 406 DDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 465
Query: 388 ICGLCQRGLVRKALELLKQM 407
+ GLC G ++ ALE+ K M
Sbjct: 466 LDGLCDNGKLKDALEMFKAM 485
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 142/302 (47%), Gaps = 31/302 (10%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F F LI Y A R D E+L+ M G D T + ++
Sbjct: 390 FTFNTLIDGYCGAKRIDDGT------------------ELLHEMTETGLVADTTTYNTLI 431
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS-- 234
C DL++ L Q+M G C +V ++ L K+ DAL + M+
Sbjct: 432 HGFCLVGDLNA--ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489
Query: 235 ---------DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+G++PD+ Y ++++G+I + +++AEEL+ E+ G+VP+ TY+ ING
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LCKQ+ ++ +M M PDV+T+NTL+ CK ++ EL EM +GIV +
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVAD 609
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
TY +I G G+I A + +E ++ G+ + + L + +++A+ +L+
Sbjct: 610 AITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLE 669
Query: 406 QM 407
+
Sbjct: 670 DL 671
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 166/393 (42%), Gaps = 66/393 (16%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y ++ + + ++L +E+ + + I+ +I R D+
Sbjct: 210 QPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAH 269
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
NL+ ++ + I F NCMI DGFC G+ QR +QE
Sbjct: 270 NLYTEMQEKGIFPDLFT---YNCMI-DGFCSSGRWSE-------AQR---------LLQE 309
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M + +V Y+ +I + VK+ K F+A + ++M GI P+ + Y +++G Q
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
AE +F + G PDV+T+N I+G C ++ G +++ M E G D TYNT
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429
Query: 317 LLQALCKVRELNRLRELVKEM--------------------------------------- 337
L+ C V +LN +L ++M
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489
Query: 338 -------KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ G+ ++QTY+I+I GL ++G +EA L +E ++G+ + + I G
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC++ + +A ++ M K SP + L+
Sbjct: 550 LCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLV 582
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 130/259 (50%), Gaps = 7/259 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ Q+M++ + + +I+ K+ AL ++ G +PD+V ++ +
Sbjct: 94 DLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTL 153
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ V++ +A +LF ++ P+V T+ +NGLC++ V + ++ M E G
Sbjct: 154 LHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGL 209
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P+ ITY T++ +CK+ + L+++M + I N+ YS +IDGL G +A
Sbjct: 210 QPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAH 269
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
L E KG+ ++ I G C G +A LL++M ++ ++P + AL+ +
Sbjct: 270 NLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAY 329
Query: 427 VSKLDFVNTSFIRLVDQIL 445
V + F L D++L
Sbjct: 330 VKERKFFEAE--ELYDEML 346
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 13/287 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A + M G D T + ++ C + + D+ + EM + G
Sbjct: 368 NRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRI--DDGTELLHEMTETGLVADTT 425
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + AL + QM S G+ PDIV +L+G+ A E+F +
Sbjct: 426 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 485
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
G+ PDV TYN+ I+GL + ++ M G P+ ITY++
Sbjct: 486 QKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSS 545
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M K ++ T++ ++ G G + + L E +G
Sbjct: 546 MINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRG 605
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + I G + G + AL++ ++M V P ++L
Sbjct: 606 IVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSML 652
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +LF +++ +P V +N + + + + I + ME DV ++N L++
Sbjct: 61 AIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIK 120
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
C +L ++ G ++ T+S ++ GL + + EA L + + T
Sbjct: 121 CFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVVT 180
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+++ + GLC+ G V +A+ LL +M + + P
Sbjct: 181 FTTLMN----GLCREGRVVEAVALLDRMVEDGLQP 211
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 178/370 (48%), Gaps = 22/370 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + C P Y ++ L + + + S+L +EK + E + L+ ++
Sbjct: 550 LLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK-QGCEPSVVTYSSLMASF 608
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ ++S++LF + M+ G D T SL+++ +C+ D+
Sbjct: 609 YKRDQEEESLSLF------------------DEMVRKGCVADVSTYSLVINCLCKSDDV- 649
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D+ L MK+ G + +Y ++ SLVK EK+ AL I N+++ + PD Y +
Sbjct: 650 -DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG++ +A +L D + ++PD++TY ++GL K +E M M E G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+PDV+ Y +L+ L K +L+ + + M K V ++ TYS +ID L +G + EA
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
E +++KG ++ I ++G+V +ALEL ++M + P + LLS
Sbjct: 829 YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN-LLSG 887
Query: 427 VSKLDFVNTS 436
++K +N +
Sbjct: 888 LAKAGRLNVA 897
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 126/236 (53%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + ++ MKK +V YT ++ L K ++ +A+ +L +M+ G +P +V Y+ +
Sbjct: 545 DEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSL 604
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ ++ ++ LFDE++ G V DV TY++ IN LCK ++V+ + + M+E G
Sbjct: 605 MASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGM 664
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P + Y TLL +L K +++ ++ E++ +V + Y+IM++GL + EAC
Sbjct: 665 EPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACK 724
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L++ N+ + + + GL + G + +A + +M ++ P + +L+
Sbjct: 725 LVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLM 780
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 188/436 (43%), Gaps = 72/436 (16%)
Query: 62 HILSSLLHSFS----------IYN------CEPPPEAYHFVIKTLAENSQFCDISSVLDH 105
H+L+SLL +F I+N C P Y+FV++ L + + V
Sbjct: 218 HLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGK 277
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGF 165
+ + + DA F+ V+ F R R+ A E + MI G
Sbjct: 278 LGQ--------------FRIQPDAQTFRIFVHSFN-----RSGRLDPAAEPIQEMIKSGI 318
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
T ++++ ++ + ++ DE F MK L +V YT ++ L K ++ +A
Sbjct: 319 DPGVHTFTVLIDALVKSGNI--DEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEA 376
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ +MK + PD + Y +++G+ + A LF E+ GLVP++ TYN+ I+
Sbjct: 377 CEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISV 436
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG---I 342
L K ++ ++E G+ PDV TYNTL+ L K +++++ ++KEM KG I
Sbjct: 437 LGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECI 496
Query: 343 V----------------------------LNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+ L TY+ ++ G + EA LL E +
Sbjct: 497 ISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLL-EVMK 555
Query: 375 KGLCTQSSMFDETIC-GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
K C + + T+ GL + G + +A+ LL++M + P + + L++S K D
Sbjct: 556 KHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS-LMASFYKRDQE 614
Query: 434 NTSFIRLVDQILNTPC 449
S + L D+++ C
Sbjct: 615 EES-LSLFDEMVRKGC 629
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 149/316 (47%), Gaps = 20/316 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y+ ++ L ++++ + ++D + K +N F + L+ + R +++ N
Sbjct: 701 PDTFVYNIMVNGLVKSNRVDEACKLVDSM-KNQNILPDLFTYTSLLDGLGKSGRLEEAFN 759
Query: 138 LFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+F K+ + + ++ A+ I M D T S ++ S+
Sbjct: 760 MFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLG 819
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
++ + +E F + G + Y+++I S KK V AL + +M+ P+
Sbjct: 820 KEGRV--EEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
IV Y +L+G+ AE+L +E+ +G VPD+ TYN+ I+G+ K V+
Sbjct: 878 IVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFK 937
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M+E G PDVIT+ +L+++L KV +L EL M+ +G ++ TY+++ID L G
Sbjct: 938 RMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAG 997
Query: 361 DIIEACGLLEEALNKG 376
+ EA + E KG
Sbjct: 998 KVHEAAMIFHEMKVKG 1013
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NRV A ++++ M N D T + +L + + L +E +M + G +V
Sbjct: 717 NRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL--EEAFNMFTKMTEEGHEPDVV 774
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT+++ L K K+ AL I M PD+V Y+ +++ + + +A F+
Sbjct: 775 AYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENS 834
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G P+V Y+ I+ K+ V+ +++ M+ P+++TYN LL L K L
Sbjct: 835 ISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRL 894
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
N +L++EM+ G V +L TY+I+IDG+ G + EA + KG+ F
Sbjct: 895 NVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSL 954
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I L + + +A EL M ++ +P + L+
Sbjct: 955 IESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLI 990
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 3/283 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
++ FA++I N + D +++++ + + + DE V MK +
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRV--DEACKLVDSMKNQNILPDLFT 740
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT+++ L K ++ +A + +M +G +PD+V YT +++ + A +F +
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
VPDV TY+ I+ L K+ VE G P+V Y++L+ + K ++
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R EL +EM+ + N+ TY+ ++ GLA G + A LLEE G ++ I
Sbjct: 861 RALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILI 920
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
G+ + G+V +A K+M +K + P + + L+ S+ K+D
Sbjct: 921 DGVGKMGMVDEAESYFKRMKEKGIVPDVITFTS-LIESLGKVD 962
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 37/296 (12%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+ T +L++ + ++ +D ++ + M K G M T+++R+ V
Sbjct: 176 DGYSHTVGTYTLMIKRLAGAQE--TDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVL----------NGVIV---------QED------Y 257
AL I NQMKS G P Y VL + VIV Q D +
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293
Query: 258 VK----------AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
V A E E++ G+ P V+T+ V I+ L K N++ K M+ L
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P+V+TY TL+ L K L E+ EMK + Y+ +IDGL G+ ACG
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E ++GL ++ I L + G +A +L + ++ P + L+
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLI 469
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 137/315 (43%), Gaps = 26/315 (8%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +IK LA + + +L + K E + L++T+ + ++ +F +
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWK-EGHRISMHLLTSLLRTFGSTNNVSGALEIFNQ 242
Query: 142 IPKF----RINRVGFAIEILNCMINDGFC----------------VDGKTCSLILSSVCE 181
+ F N F +E+L + GF D +T + + S
Sbjct: 243 MKSFGCNPSTNMYNFVLELL---VKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSF-- 297
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
R D +QEM K G G+ +T +I +LVK + +A N MK+ P++
Sbjct: 298 NRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNV 357
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V YT ++NG+ +A E+F E+ PD YN I+GL K + +
Sbjct: 358 VTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKE 417
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M++ G P++ TYN ++ L K +L ++K +G V ++ TY+ +ID L G
Sbjct: 418 MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQ 477
Query: 362 IIEACGLLEEALNKG 376
+ + +++E + KG
Sbjct: 478 MDKVLAIIKEMVEKG 492
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D L +EM++ +V Y N++ L K ++ A +L +M+ G PD+V Y ++
Sbjct: 860 DRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNIL 919
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++GV +AE F + G+VPDV T+ I L K + + ++ MEE G
Sbjct: 920 IDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGY 979
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
P V+TYN L+ L + +++ + EMK KG + + T IM
Sbjct: 980 NPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 3/251 (1%)
Query: 196 EMKKLGF-CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
E LGF G + Y ++ + + V +A+ +L MK P +V YT +++G+
Sbjct: 517 EYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKA 576
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A L E+ G P V TY+ + K++ E + + M G DV TY
Sbjct: 577 GRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTY 636
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+ ++ LCK ++++ ++ MK +G+ L Y ++ L I A + E
Sbjct: 637 SLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQE 696
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDF 432
L + +++ + GL + V +A +L+ M ++++ P + +LL L +L+
Sbjct: 697 SSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEE 756
Query: 433 VNTSFIRLVDQ 443
F ++ ++
Sbjct: 757 AFNMFTKMTEE 767
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS + + L+ E L ++EM+K+G +V Y +I + K V +A +MK
Sbjct: 884 LLSGLAKAGRLNVAEKL--LEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKE 941
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
GI PD++ +T ++ + + ++A ELFD + G P V TYNV I+ L + V
Sbjct: 942 KGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHE 1001
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ M+ G PD IT +++ + VRE
Sbjct: 1002 AAMIFHEMKVKGCMPDGITIG-IMKRILSVRE 1032
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 139/271 (51%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+LN M+ +G D T + IL C E +G +++M+ G +V Y+++
Sbjct: 228 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSG--QPKEAIGTLKKMRSDGVEPNVVTYSSL 285
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A I + M G++PDI Y +L G + +++E+LFD ++ +G+
Sbjct: 286 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGV 345
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ TYN I+G C ++ K++A M +G KPD++TY TL+ C+V ++
Sbjct: 346 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 405
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L KEM G+ N+ TY+I++ GL A L G + S ++ + GLC
Sbjct: 406 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 465
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ L +AL + + + D+ R + ++
Sbjct: 466 KNNLTDEALRMFQNLCLTDLQLETRTFNIMI 496
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 14/299 (4%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ L ++ GF VD T + +L +C + +SD + ++ M +LG
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKR-TSDAMDIVLRRMTELGCIPD 162
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGV--------IVQ 254
+ Y N+++ L + + +AL +L+ M D G PD+V Y VLNG +
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTA 222
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ KA E+ + ++ G++PD TYN ++G C + I + M G +P+V+TY
Sbjct: 223 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 282
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
++L+ LCK R++ M +G+ ++ TY ++ G +G +IE+ L + +
Sbjct: 283 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVR 342
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
G+ ++ I G C G + +A +LL M V P + L+ VS++D
Sbjct: 343 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 401
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 161/371 (43%), Gaps = 29/371 (7%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIF 119
QP L EP Y ++ L +N + + + D + KR E +
Sbjct: 259 QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATY 317
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILS 177
L++ + R +S LF + R+G +I+ N +I DG C+ GK
Sbjct: 318 RTLLQGHCKEGRVIESEKLFDLMV-----RIGVKPDIITYNTLI-DGCCLAGKM------ 365
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
DE + M +G +V Y +I + ++ DAL + +M S G+
Sbjct: 366 ----------DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 415
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P+I+ Y ++L G+ A+EL+ + G ++ TYN+ ++GLCK N + ++
Sbjct: 416 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 475
Query: 298 MIA--CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
M C+ +L + + T+N ++ AL K ++ ++L G+V +++TYS+M +
Sbjct: 476 MFQNLCLTDL--QLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 533
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L +G + E L G S M + + L QRG + +A L + +K S
Sbjct: 534 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLE 593
Query: 416 ARVWEALLLSS 426
A LL SS
Sbjct: 594 ASTASFLLESS 604
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 5/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A +I + M G D T +L C E R + S++L M ++G ++ Y
Sbjct: 298 ARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDL---MVRIGVKPDIITYNT 354
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K+ +A +L M S G+KPDIV Y ++NG A LF E++ G
Sbjct: 355 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 414
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P++ TYN+ + GL A ++ + + G++ ++ TYN +L LCK +
Sbjct: 415 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 474
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + + + L +T++IMI L G + EA L GL + L
Sbjct: 475 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENL 534
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
++G + + +L M + S +R+ +++ + + D +++ ++D+
Sbjct: 535 IEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 587
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P V+TY + I C+ ++ G + + + G + D IT+ LL+ LC + +
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 332 ELV-KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE-EALNKGLCTQSSM--FDET 387
++V + M G + ++ +Y+ ++ GL + EA LL A ++G + + ++
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 388 ICGLCQRGL--------VRKALELLKQMADKDVSPGARVWEALL 423
+ G + G+ + KA+E+L M V P + ++L
Sbjct: 208 LNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 251
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EI M+ G D + S +++ R L D+ L + ++MKK G V YT +
Sbjct: 90 AKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL--DQALVYFRDMKKFGLVPDNVIYTVL 147
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + + +AL I ++M G D++ Y +LNG+ ++ A++LFDE++ G
Sbjct: 148 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 207
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD YT+ I+G C+ N+ + + M + KPD++ YNTL+ CKV E+ + E
Sbjct: 208 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 267
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L M + I N TY I+I+ S G + EA L + + KG+ + I G C
Sbjct: 268 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 327
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G KA E L +M K V+P + L+
Sbjct: 328 RSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 114/218 (52%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
MV Y +I + ++ + +A I+N M G+KP + Y ++NG+ + Y +A+ +
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L +GL PD TYN + C+++N ++ M G PD++++++L+ + R
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L++ ++MK G+V + Y++++ G G+++EA + +E L +G ++
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ ++ A +L +M ++ P + L+
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLI 218
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 122/253 (48%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++ + C + L +E + M G + Y +I L KK + A GIL
Sbjct: 3 TYNTLIGAYCREGLL--EEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M + G+ PD Y +L ++++ +A+E+F E+L G+VPD+ +++ + +
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+++ + M++ G PD + Y L+ C+ + ++ EM +G VL++ Y+
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+++GL + + +A L +E + +G F I G CQ G + KAL L M +
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240
Query: 411 DVSPGARVWEALL 423
++ P + L+
Sbjct: 241 NIKPDIVAYNTLI 253
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++I + M+ G +D + IL+ +C+++ L+ + L EM + G +T +
Sbjct: 160 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKL--FDEMVERGALPDFYTFTTL 217
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + AL + M IKPDIV Y +++G + KA EL+D ++ +
Sbjct: 218 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 277
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TY + IN C +V ++ M E G KP ++T NT+++ C+ + ++ E
Sbjct: 278 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 337
Query: 333 LVKEMKWKGIVLNLQTYSIMID 354
+ M KG+ + +Y+ +I+
Sbjct: 338 FLGRMIAKGVAPDHISYNTLIN 359
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ +I +G + EA ++ +KGL ++ I GLC++G +A +L +M
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 408 ADKDVSPGARVWEALLLSSVSKLDF 432
+ +SP + LL+ S + +F
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNF 87
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 164/360 (45%), Gaps = 27/360 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ I +P P Y+ VI L + + + VL + E I+ LI +
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMIS-EGIAPDGVIYTTLIDGF 268
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCS---LILSSVCEQR 183
+ LF ++ K +I+ + C G C G+ L VC++
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVIC----GLCQTGRVMEADKLFHEMVCKR- 323
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
L DE V YT +I K+ K+ +A + NQM G+ P+IV
Sbjct: 324 -LEPDE-----------------VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 365
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT + +G+ + A EL E+ GL ++YTYN +NGLCK N++ +K++ ME
Sbjct: 366 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 425
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G PD +TY TL+ A CK RE+ R EL+++M + + + T++++++G G +
Sbjct: 426 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 485
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ LL+ L KG+ ++ ++ I C R +R E+ + M K V P + L+
Sbjct: 486 DGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 545
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 155/325 (47%), Gaps = 41/325 (12%)
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD-----LSSDELLGF 193
F+ P + V FA ++ + M+N G + +C+L +S + E D L + +L
Sbjct: 152 FWVNPNLDVG-VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKL 210
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI- 252
++EM+ G Y VI L K KV +A +L +M S+GI PD V YT +++G
Sbjct: 211 IEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCK 270
Query: 253 ------------------VQEDYV----------------KAEELFDELLVLGLVPDVYT 278
+ D++ +A++LF E++ L PD T
Sbjct: 271 LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 330
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y I+G CK+ ++ + M ++G P+++TY L LCK E++ EL+ EM
Sbjct: 331 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 390
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KG+ LN+ TY+ +++GL G+I +A L+++ G + + + C+ +
Sbjct: 391 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMV 450
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A ELL+QM D+++ P + L+
Sbjct: 451 RAHELLRQMLDRELQPTVVTFNVLM 475
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 96 FCDISSV------LDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRIN 148
FC + +V D ++KR+ +P+FI + +I R ++ LF+++ R+
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKI--SPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 325
Query: 149 RVGFAIEILNCMINDGFCVDGK---------------------TCSLILSSVCEQRDL-S 186
E+ + DG+C +GK T + + +C+ ++ +
Sbjct: 326 ----PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDT 381
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
++ELL EM + G + Y +++ L K + A+ ++ M+ G PD V YT
Sbjct: 382 ANELL---HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ + V+A EL ++L L P V T+NV +NG C +E G K++ M E G
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+ TYN+L++ C + E+ + M KG+V + TY+I+I G ++ EA
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM------ADKDV 412
L + + KG S ++ I G +R +A EL +QM AD+++
Sbjct: 559 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 610
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A E+L+ M G ++ T + +++ +C+ ++ D+ + +++M+ GF V Y
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI--DQAVKLMKDMEVAGFHPDAVTY 436
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T ++ + K ++ A +L QM ++P +V + +++NG + E+L +L
Sbjct: 437 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 496
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G++P+ TYN I C +NN+ A ++ M G PD TYN L++ CK R +
Sbjct: 497 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 556
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L ++M KG L + +Y+ +I G + +EA L E+ +GL +++
Sbjct: 557 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 612
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTN 211
A++++ M GF D T + ++ + C+ R++ + ELL ++M +V +
Sbjct: 417 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL---RQMLDRELQPTVVTFNV 473
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ + D +L M GI P+ Y ++ ++ + E++ + G
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 533
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+VPD TYN+ I G CK N++ + M G V +YN L++ K ++ R
Sbjct: 534 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 593
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
EL ++M+ +G+V + + Y+I D +G + L +EA+ K L
Sbjct: 594 ELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCL 639
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 168/349 (48%), Gaps = 25/349 (7%)
Query: 84 HFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI- 142
F++ ++S +++LD R F+F L+ Y D+ D++ F +
Sbjct: 125 RFLVSRKGKDSAASVFAAILDTAGTR----CSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180
Query: 143 -PKFRINRVGFAIEILNCMIND----------------GFCVDGKTCSLILSSVCEQRDL 185
F+I G +L+ MIN GF + +++++ C++ +
Sbjct: 181 NSNFQIPFHGCGY-LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSI 239
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+L+ E++K G V + +I L K + + + M+ + I PD+ Y+
Sbjct: 240 RDAKLI--FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYS 297
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++++G+ + AE+LFDE+ GL P+ T+ I+G C+ +++ + M +
Sbjct: 298 VLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTM 357
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G KPD++ YNTLL LCKV ++N+ R+LV EM+ G+ + TY+ +IDG +GD+ A
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESA 417
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ + +G+ + F I G C+ G VR A L++M + + P
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 128/249 (51%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+++ +C+ R+L DE + M++ + Y+ +I L K+ ++ A + ++M+
Sbjct: 264 LINGLCKSRNL--DEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G++P+ + +T +++G A + ++L +G+ PD+ YN +NGLCK +V
Sbjct: 322 RGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
K++ M +G KPD ITY TL+ CK +L E+ K M +G+VL+ ++ +I
Sbjct: 382 ARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G G + +A L E + G+ + + I G C++G V+ +LLK+M P
Sbjct: 442 GFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501
Query: 415 GARVWEALL 423
G + L+
Sbjct: 502 GVITYNVLM 510
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S+++ +C++ L E L EM++ G + +T +I + ++ A+ +
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQL--FDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYH 352
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM + G+KPD+V Y +LNG+ D KA +L DE+ ++G+ PD TY I+G CK+
Sbjct: 353 QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEG 412
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++E+ +++ M E G D + + L+ C+ + ++EM G+ + TY+
Sbjct: 413 DLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYT 472
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++IDG KG++ LL+E G ++ + GLC++G ++ A LL+ M +
Sbjct: 473 MVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNL 532
Query: 411 DVSPGARVWEALL 423
V+P + LL
Sbjct: 533 GVTPDDITYNILL 545
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 136/259 (52%), Gaps = 2/259 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+G + MI V+ T ++++ +C+ V++MK GF ++
Sbjct: 209 RIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAG--DVVEDMKAWGFSPSVIT 266
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K K+F A +L +M + I P+ + + ++++G E+ A+++F+E+
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P+V TYN INGLC ++ + + M +G KP+V+TYN L+ CK + L
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
RE++ ++ +G+ N+ T++ +ID G + +A L L+ G+C S ++ I
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 389 CGLCQRGLVRKALELLKQM 407
G C+ G V++A +L K+M
Sbjct: 447 VGFCREGNVKEARKLAKEM 465
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 151/331 (45%), Gaps = 25/331 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
+ VI L + +F V++ + K F + +I Y A + + L +
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDM-KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 142 IPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
+ RI N + F I I DGFC RD + +EM++
Sbjct: 290 MVAKRIHPNEITFNILI------DGFC----------------RDENVTAAKKVFEEMQR 327
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G +V Y ++I L K+ +ALG+ ++M G+KP++V Y ++NG ++ +
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A E+ D++ GL P+V T+N I+ K ++ + + M + G P+V TYN L+
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
C+ + R+L KEM+ G+ +L TY+I++D L KG+ +A LL+E GL
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNP 507
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ I G + G AL + M K
Sbjct: 508 SHLTYNALIDGYFREGNSTAALNVRTLMEKK 538
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 9/293 (3%)
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDEL 190
F +N K+ KF+ + G +E + GF T + I+ C+ + +D L
Sbjct: 232 FDVVINGLCKVGKFQ--KAGDVVEDMKAW---GFSPSVITYNTIIDGYCKAGKMFKADAL 286
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L +EM + + +I + E V A + +M+ G++P++V Y ++NG
Sbjct: 287 L---KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ +A L D++ +GL P+V TYN ING CK+ ++ +M+ + + G P+
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
VIT+NTL+ A K ++ L M G+ N+ TY+ +I G +G++ EA L +
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E GL ++ + LC++G RKA+ LL +M + ++P + AL+
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALI 516
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 119/226 (52%), Gaps = 6/226 (2%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
GF + ++ SLVK+ ++ + +M I ++V + +V+NG+ + KA
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK---PDVITYNTL 317
++ +++ G P V TYN I+G CK + K A ++E+ +K P+ IT+N L
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM---FKADALLKEMVAKRIHPNEITFNIL 305
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ C+ + +++ +EM+ +G+ N+ TY+ +I+GL S G + EA GL ++ GL
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G C++ ++++A E+L + + ++P + L+
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M G C + Y +I ++ V +A + +M+ +G+K D+V Y ++++ + + +
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA L DE+ +GL P TYN I+G ++ N A + + ME+ G + +++TYN
Sbjct: 490 TRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNV 549
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
L++ C +L L+ EM KG++ N TY I+ D + KG I + G L
Sbjct: 550 LIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 602
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ G + ++ N +L +L K + + + KEM + I +N+ T+ ++I+GL G
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A ++E+ G ++ I G C+ G + KA LLK+M K + P + L+
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 143/269 (53%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R G A+ +L+ M G + T S +L S C R+ D+ + +M GF
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC--RNGMWDDARAMLDQMSAKGFSMN 420
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I +L K K+ +A+ ++ +MKS G KPDI Y ++ + + +AE +F
Sbjct: 421 SQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFG 480
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
LL G+V + TYN I+ L + G+++ M G DV++YN L++ALCK
Sbjct: 481 NLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEG 540
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++R L++EM KGI N +Y+++I+ L G + +A L +E LN+GL ++
Sbjct: 541 NVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYN 600
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLC+ G AL LL+++ +++V P
Sbjct: 601 TLINGLCKVGWTHAALNLLEKLPNENVHP 629
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 134/310 (43%), Gaps = 46/310 (14%)
Query: 178 SVCEQRDLSSDELLGFVQEMK----KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
S + D +D LL + + ++ F FG+ R+L + + DAL +L M
Sbjct: 153 STLARADCHADALLLYRRMLRDRVPPTTFTFGVA-----ARALCRLGRARDALALLRGMA 207
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G PD V Y V++ ++ Q +A L DE+L++G DV T+N + GLC +V
Sbjct: 208 RHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVR 267
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRE--------------------------- 326
+++ M G P V+TY LL+ LC+ R+
Sbjct: 268 EAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCL 327
Query: 327 ----LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
L R EL + M KG ++ TY+I++ GL G A +L+E KG
Sbjct: 328 AEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIV 387
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
+ + C+ G+ A +L QM+ K S ++ + ++ L KLD +RL
Sbjct: 388 TYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLD----EAMRL 443
Query: 441 VDQILNTPCK 450
V ++ + CK
Sbjct: 444 VQEMKSQGCK 453
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 167/386 (43%), Gaps = 41/386 (10%)
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
H+L + F++ P +Y+ V+ TLA D + +L R+ F F
Sbjct: 130 HLLDQMPRRFAV---TPSFRSYNAVLSTLARADCHAD-ALLLYRRMLRDRVPPTTFTFGV 185
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDG 164
+ R +D++ L + + V A +L+ M+ G
Sbjct: 186 AARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-------GFCFGMVDYTNVIRSLV 217
D T + ++ +C LG V+E +L G +V Y ++R L
Sbjct: 246 CAADVNTFNDVVLGLCG---------LGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLC 296
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
+ + +A +L ++ + ++V V+ G + + +A EL++ + G PDV+
Sbjct: 297 RTRQADEAYAMLGRVP----EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVH 352
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYN+ ++GLCK + ++M+ MEE G P+++TY+TLL + C+ + R ++ +M
Sbjct: 353 TYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 412
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
KG +N Q Y+ +I L G + EA L++E ++G ++ I LC +
Sbjct: 413 SAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQM 472
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
+A + + ++ V + L+
Sbjct: 473 DEAEHIFGNLLEEGVVANGITYNTLI 498
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 153/387 (39%), Gaps = 66/387 (17%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+LL + + C P Y VI L + +++LD + L+
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEML--------------LMGC 246
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
AD + F D V + + V A +++ M+ G T +L +C R
Sbjct: 247 AADVNTFNDVV-----LGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTR-- 299
Query: 186 SSDE---LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
+DE +LG V E+ +V VIR + + K+ A + M S G PD+
Sbjct: 300 QADEAYAMLGRVPEVN-------VVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVH 352
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC--------------- 287
Y ++++G+ A + DE+ G P++ TY+ ++ C
Sbjct: 353 TYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 412
Query: 288 --------------------KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
K ++ ++++ M+ G KPD+ TYNT++ LC ++
Sbjct: 413 SAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQM 472
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + + +G+V N TY+ +I L G E L E + G ++
Sbjct: 473 DEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGL 532
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I LC+ G V +++ LL++M K + P
Sbjct: 533 IKALCKEGNVDRSMMLLEEMMTKGIKP 559
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 36/258 (13%)
Query: 225 ALGILNQM-KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
AL +L+QM + + P Y VL+ + + + A L+ +L + P +T+ V
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
LC+ + ++ M G PD + Y T++ AL + L+ EM G
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS---------------------- 381
++ T++ ++ GL G + EA L++ + G CT S
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHG-CTPSVVTYGFLLRGLCRTRQADEAYA 306
Query: 382 ----------SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
M + I G G + +A EL + M K P + +L+ + KL
Sbjct: 307 MLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYN-ILMHGLCKLG 365
Query: 432 FVNTSFIRLVDQILNTPC 449
++ +R++D++ C
Sbjct: 366 RCGSA-VRMLDEMEEKGC 382
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 164/360 (45%), Gaps = 27/360 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ I +P P Y+ VI L + + + VL + E I+ LI +
Sbjct: 310 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMIS-EGIAPDGVIYTTLIDGF 368
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCS---LILSSVCEQR 183
+ LF ++ K +I+ + C G C G+ L VC++
Sbjct: 369 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVIC----GLCQTGRVMEADKLFHEMVCKR- 423
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
L DE V YT +I K+ K+ +A + NQM G+ P+IV
Sbjct: 424 -LEPDE-----------------VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 465
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT + +G+ + A EL E+ GL ++YTYN +NGLCK N++ +K++ ME
Sbjct: 466 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G PD +TY TL+ A CK RE+ R EL+++M + + + T++++++G G +
Sbjct: 526 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 585
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ LL+ L KG+ ++ ++ I C R +R E+ + M K V P + L+
Sbjct: 586 DGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 645
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 145/301 (48%), Gaps = 2/301 (0%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
LI TY D ++F+++ + A ++ + M+N G + +C+L +S + E
Sbjct: 171 LIYTYKDWGSDPRVFDIFFQVL-VEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSE 229
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
D L FV E ++G C+ Y + SL + +V +A +L QM+ G PD+
Sbjct: 230 DLDGIKIALKVFV-EFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDV 288
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
+ Y+ V+NG + + +L +E+ + GL P+ YTYN I LCK V +++
Sbjct: 289 ISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M G PD + Y TL+ CK+ ++ L EM+ + I + TY+ +I GL G
Sbjct: 349 MISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGR 408
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
++EA L E + K L + I G C+ G +++A L QM ++P + A
Sbjct: 409 VMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 468
Query: 422 L 422
L
Sbjct: 469 L 469
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 149/313 (47%), Gaps = 37/313 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A ++L M G D + S +++ C+ +L +L ++EM+ G
Sbjct: 265 QLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQ--RVLKLIEEMQIKGLKPN 322
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI------------- 252
Y VI L K KV +A +L +M S+GI PD V YT +++G
Sbjct: 323 PYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFD 382
Query: 253 ------VQEDYV----------------KAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ D++ +A++LF E++ L PD TY I+G CK+
Sbjct: 383 EMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEG 442
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ + M ++G P+++TY L LCK E++ EL+ EM KG+ LN+ TY+
Sbjct: 443 KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYN 502
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+++GL G+I +A L+++ G + + + C+ + +A ELL+QM D+
Sbjct: 503 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 562
Query: 411 DVSPGARVWEALL 423
++ P + L+
Sbjct: 563 ELQPTVVTFNVLM 575
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 96 FCDISSV------LDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRIN 148
FC + +V D ++KR+ +P+FI + +I R ++ LF+++ R+
Sbjct: 368 FCKLGNVSSAYRLFDEMQKRKI--SPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 425
Query: 149 RVGFAIEILNCMINDGFCVDGK---------------------TCSLILSSVCEQRDL-S 186
E+ + DG+C +GK T + + +C+ ++ +
Sbjct: 426 ----PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDT 481
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
++ELL EM + G + Y +++ L K + A+ ++ M+ G PD V YT
Sbjct: 482 ANELL---HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 538
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ + V+A EL ++L L P V T+NV +NG C +E G K++ M E G
Sbjct: 539 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 598
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+ TYN+L++ C + E+ + M KG+V + TY+I+I G ++ EA
Sbjct: 599 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 658
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM------ADKDV 412
L + + KG S ++ I G +R +A EL +QM AD+++
Sbjct: 659 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREI 710
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A E+L+ M G ++ T + +++ +C+ ++ D+ + +++M+ GF V Y
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI--DQAVKLMKDMEVAGFHPDAVTY 536
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T ++ + K ++ A +L QM ++P +V + +++NG + E+L +L
Sbjct: 537 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 596
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G++P+ TYN I C +NN+ A ++ M G PD TYN L++ CK R +
Sbjct: 597 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 656
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L ++M KG L + +Y+ +I G + +EA L E+ +GL +++
Sbjct: 657 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 712
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQ-NNVEAGIKMIACMEELGSKPDVITYNTL 317
+A +LFD++L GL+ V + N++I+ L + + ++ +K+ E+G + +YN +
Sbjct: 200 EARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNII 259
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+LC++ + +L+ +M+ +G + ++ +YS +I+G G++ L+EE KGL
Sbjct: 260 THSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGL 319
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I LC+ G V +A +L++M + ++P ++ L+ KL V++++
Sbjct: 320 KPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT-LIDGFCKLGNVSSAY 378
Query: 438 IRLVDQI 444
RL D++
Sbjct: 379 -RLFDEM 384
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTN 211
A++++ M GF D T + ++ + C+ R++ + ELL ++M +V +
Sbjct: 517 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL---RQMLDRELQPTVVTFNV 573
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ + D +L M GI P+ Y ++ ++ + E++ + G
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 633
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+VPD TYN+ I G CK N++ + M G V +YN L++ K ++ R
Sbjct: 634 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 693
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
EL ++M+ +G+V + + Y+I D +G + L +EA+ K L
Sbjct: 694 ELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCL 739
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 144/263 (54%), Gaps = 4/263 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++S +C R + +E GF +EM G Y ++ L K ++ +A +L+
Sbjct: 280 TYNVMISGLC--RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLD 337
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M G+KP+IV Y +++G + + +A ++ E++ G+ P+ Y+ I GLCK
Sbjct: 338 EMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIG 397
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ K++ M ++G +PD TYN L+Q + + + EL+ EM+ GI+ N+ +Y
Sbjct: 398 QLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYG 457
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
IMI+GL G+ EA LLEE +++GL + M+ I G + G + A E L++M
Sbjct: 458 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKA 517
Query: 411 DVSPGARVWEALL--LSSVSKLD 431
+V P + +L+ LS+V +++
Sbjct: 518 NVHPDLFCYNSLIKGLSTVGRME 540
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ +++K G Y+ +I K + A +L QM + G+KP+ YT +L G
Sbjct: 545 YYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYF 604
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
DY K + +L G PD + Y + I L + N+E ++ +E+ G PD+
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y++L+ LCK+ ++ + L+ EM +G+ + Y+ +IDG GDI A + +
Sbjct: 665 IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 724
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
L KGL + I G C+ G + A +L K+M D+ ++P A V+ L D
Sbjct: 725 LAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADL 784
Query: 433 VNTSFIRLVDQILN 446
F L +++ N
Sbjct: 785 EQALF--LTEEMFN 796
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 165/375 (44%), Gaps = 24/375 (6%)
Query: 68 LHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYA 127
L + N P Y+ +IK L+ + + ++KR EF + LI Y
Sbjct: 511 LEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKR-GLVPDEFTYSGLIHGYC 569
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
+ A ++L M+N G + T + +L + D
Sbjct: 570 KTGNLEK------------------ADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDY-- 609
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+++ +Q M G Y VIR+L + E + A +L +++ +G+ PD+ Y+ +
Sbjct: 610 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 669
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G+ D KA L DE+ GL P + YN I+G C+ ++ + + G
Sbjct: 670 ISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 729
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P+ +TY L+ CK ++ +L KEM +GI + Y+++ G + D+ +A
Sbjct: 730 VPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALF 789
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
L EE N+G S+F+ + G C+RG +++ +LL M D+++ P A+ E ++
Sbjct: 790 LTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFG 848
Query: 426 SVSKLDFVNTSFIRL 440
KL + F L
Sbjct: 849 KAGKLGEAHRVFAEL 863
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+LN M N G + + ++++ +C+ + S E ++EM G Y +
Sbjct: 437 AFELLNEMRNSGILPNVYSYGIMINGLCQNGE--SKEAGNLLEEMISEGLKPNAFMYAPL 494
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ + A L +M + PD+ CY ++ G+ +AEE + ++ GL
Sbjct: 495 IIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGL 554
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPD +TY+ I+G CK N+E +++ M G KP+ TY LL+ K + ++
Sbjct: 555 VPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSS 614
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+++ M G + Y I+I L+ ++ A +L E GL ++ I GLC
Sbjct: 615 ILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC 674
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + KA+ LL +MA + + PG + AL+
Sbjct: 675 KIADMEKAVGLLDEMAKEGLEPGIVCYNALI 705
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M+ GI PD+ Y+ + D+ A+++F+E+ + TYNV I+GLC+
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
VE M + G PD TY L+ LCK L + L+ EM G+ N+ Y
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
++DG +G EA +L+E ++ G+ M+D I GLC+ G + +A +LLK+M
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413
Query: 412 VSPGARVWEALLLSSVSKLD 431
+ P + L+ + D
Sbjct: 414 LRPDTFTYNPLMQGHFQQHD 433
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 37/314 (11%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D T +++ +C+ L E + EM G +V Y ++ +K+
Sbjct: 304 MVDYGLSPDAFTYGALMNGLCKGSRLK--EAKALLDEMSCSGLKPNIVVYGTLVDGFMKE 361
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K +A IL +M S G++P+ + Y ++ G+ +A +L E++ +GL PD +TY
Sbjct: 362 GKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + G +Q++ + +++ M G P+V +Y ++ LC+ E L++EM
Sbjct: 422 NPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMIS 481
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEE--------------ALNKGLCTQSSM-- 383
+G+ N Y+ +I G + +G+I AC LE+ +L KGL T M
Sbjct: 482 EGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEE 541
Query: 384 -------------------FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
+ I G C+ G + KA +LL+QM + + P A + LL
Sbjct: 542 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLE 601
Query: 425 SSVSKLDFVNTSFI 438
D+ S I
Sbjct: 602 GYFKSNDYEKVSSI 615
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 140/290 (48%), Gaps = 3/290 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +IL MI+ G + ++ +C+ L L ++EM K+G Y +
Sbjct: 367 AFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKL--LKEMIKVGLRPDTFTYNPL 424
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
++ ++ A +LN+M++ GI P++ Y +++NG+ + +A L +E++ GL
Sbjct: 425 MQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGL 484
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ + Y I G K+ N+ + + M + PD+ YN+L++ L V + E
Sbjct: 485 KPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEE 544
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+++ +G+V + TYS +I G G++ +A LL + LN GL + + + + G
Sbjct: 545 YYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYF 604
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
+ K +L+ M P ++ +++ ++S+ + + +F+ L +
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIY-GIVIRNLSRSENMEVAFMVLTE 653
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 82/154 (53%)
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
LGL P N + L + + +E K+ ME G PDV TY+T ++A CK R+ +
Sbjct: 202 LGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDA 261
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+++ +EM+ + +N TY++MI GL G + EA G EE ++ GL + + +
Sbjct: 262 AKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMN 321
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ +++A LL +M+ + P V+ L+
Sbjct: 322 GLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLV 355
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 136/259 (52%), Gaps = 2/259 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+G + MI V+ T ++++ +C+ V++MK GF ++
Sbjct: 209 RIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAG--DVVEDMKAWGFSPSVIT 266
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K K+F A +L +M + I P+ + + ++++G E+ A+++F+E+
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P+V TYN INGLC ++ + + M +G KP+V+TYN L+ CK + L
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
RE++ ++ +G+ N+ T++ +ID G + +A L L+ G+C S ++ I
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 389 CGLCQRGLVRKALELLKQM 407
G C+ G V++A +L K+M
Sbjct: 447 VGFCREGNVKEARKLAKEM 465
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 161/346 (46%), Gaps = 28/346 (8%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
+ VI L + +F V++ + K F + +I Y A + + L +
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDM-KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 142 IPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
+ RI N + F I I DGFC RD + +EM++
Sbjct: 290 MVAKRIHPNEITFNILI------DGFC----------------RDENVTAAKKVFEEMQR 327
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G +V Y ++I L K+ +ALG+ ++M G+KP++V Y ++NG ++ +
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A E+ D++ GL P+V T+N I+ K ++ + + M + G P+V TYN L+
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL---NKG 376
C+ + R+L KEM+ G+ +L TY+I++D L KG+ +A LL+E KG
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKG 507
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
++ I G C +G + +A LL +M +K + P ++ L
Sbjct: 508 RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 119/226 (52%), Gaps = 6/226 (2%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
GF + ++ SLVK+ ++ + +M I ++V + +V+NG+ + KA
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK---PDVITYNTL 317
++ +++ G P V TYN I+G CK + K A ++E+ +K P+ IT+N L
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM---FKADALLKEMVAKRIHPNEITFNIL 305
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ C+ + +++ +EM+ +G+ N+ TY+ +I+GL S G + EA GL ++ GL
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G C++ ++++A E+L + + ++P + L+
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + +++ C+++ L E + ++ K G ++ + +I + K ++ DA + +
Sbjct: 371 TYNALINGFCKKKMLK--EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M G+ P++ Y ++ G + + +A +L E+ GL D+ TYN+ ++ LCK+
Sbjct: 429 MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG 488
Query: 291 NVEAGIKMI---ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
++++ ME+ G + +++TYN L++ C +L L+ EM KG++ N
Sbjct: 489 ETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRT 548
Query: 348 TYSIMIDGLASKGDIIEACGLL 369
TY I+ D + KG I + G L
Sbjct: 549 TYDILRDEMMEKGFIPDIDGHL 570
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ G + ++ N +L +L K + + + KEM + I +N+ T+ ++I+GL G
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A ++E+ G ++ I G C+ G + KA LLK+M K + P + L+
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI 306
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 129/234 (55%), Gaps = 3/234 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVL 270
V++S + + AL I+N KS G P ++ Y +L+ VI + VK AE +F E++
Sbjct: 138 VVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES 197
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ P+VYTYN+ I G C N+E G+ ME G P+V+TYNT++ A CK+R++
Sbjct: 198 GVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEA 257
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L++ M KG+ NL +Y+++I+GL +G + E +LEE + F+ I G
Sbjct: 258 FKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLING 317
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
C G +AL L +M +SP + L++S+ K +N + + +DQ+
Sbjct: 318 YCNVGNFHQALVLHAEMVKNGLSPNVVTYTT-LINSMCKAGNLNRA-MEFLDQM 369
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 160/355 (45%), Gaps = 26/355 (7%)
Query: 72 SIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHR 131
S Y C+ + V+K+ A R N ++L K+Y
Sbjct: 124 SYYQCKSSSAVFDLVVKSCA-----------------RVNLINKALSIVNLAKSYG---- 162
Query: 132 FQDSVNLFYKIPKFRI---NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD 188
F V + I I V A I M+ G + T ++++ C +L
Sbjct: 163 FMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
L F EM++ G +V Y +I + K K+ +A +L M G+ P+++ Y +V+
Sbjct: 223 --LFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVI 280
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG+ + + E+ +E+ VPD T+N ING C N + + A M + G
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+V+TY TL+ ++CK LNR E + +M+ +G+ N +TY+ +IDG + +G + +A +
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQI 400
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++E + G ++ I G C G + A LL++M ++ P + ++
Sbjct: 401 MKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTII 455
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 2/269 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
EIL M + D T + +++ C + + L EM K G +V YT +I
Sbjct: 294 EILEEMSKRRYVPDRVTFNTLINGYCNVGNF--HQALVLHAEMVKNGLSPNVVTYTTLIN 351
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
S+ K + A+ L+QM+ G+ P+ YT +++G Q +A ++ E++ G P
Sbjct: 352 SMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTP 411
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ TYN ING C +E ++ M E G PDV++Y+T++ C+ +EL + +L
Sbjct: 412 TIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLK 471
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
EM KGI ++ TYS +I GL + + E C L +E L+ GL + I C
Sbjct: 472 VEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIE 531
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G + KAL L +M K SP + L+
Sbjct: 532 GDLDKALRLHDEMIQKGFSPDIVTYNVLI 560
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 163/357 (45%), Gaps = 21/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL ++ P +Y+ VI L Q + S +L+ + KR + F LI Y
Sbjct: 260 LLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR-YVPDRVTFNTLINGY 318
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ F ++ L + M+ +G + T + +++S+C+ +L
Sbjct: 319 CNVGNFHQALVLHAE------------------MVKNGLSPNVVTYTTLINSMCKAGNL- 359
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ + F+ +M+ G YT +I ++ + A I+ +M +G P I+ Y
Sbjct: 360 -NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG + A L E++ G +PDV +Y+ I+G C+ +E ++ M G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PDV TY++L+Q LCK R L + +L +EM G+ + TY+ +I+ +GD+ +A
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E + KG ++ I G ++ ++A LL ++ ++ P + L+
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 128/318 (40%), Gaps = 52/318 (16%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ A +L MI GF D + S I+S C ++L ++ EM G +
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL--EKAFQLKVEMVAKGISPDV 483
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y+++I+ L K+ ++ + + +M S G+ PD V YT ++N ++ D KA L DE
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL-------- 318
++ G PD+ TYNV ING KQ+ + +++ + S P+ ITYNTL+
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEF 603
Query: 319 ------------------------------------------QALCKVRELNRLRELVKE 336
KV + + L KE
Sbjct: 604 KSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKE 663
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M G + T + L +G +E LL+ L T++++ I + G
Sbjct: 664 MLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGN 723
Query: 397 VRKALELLKQMADKDVSP 414
+ +LK MA + P
Sbjct: 724 MDAVFNVLKDMALSGLLP 741
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 181/377 (48%), Gaps = 29/377 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + C P E ++ VI L + + + + +++ + R F + + L+
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFAPDDITYGYLMNGL 332
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK------------TCSL 174
R + +LFY+IPK I I N +I+ GF G+ T
Sbjct: 333 CKIGRVDAAKDLFYRIPKPEI-------VIFNTLIH-GFVTHGRLDDAKAVLSDMVTSYG 384
Query: 175 ILSSVCEQRDL----SSDELLGF----VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
I+ VC L + L+G + +M+ G + YT ++ K K+ +A
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+LN+M +DG+KP+ V + +++ + +A E+F E+ G PDVYT+N I+GL
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C+ + ++ + ++ M G + +TYNTL+ A + E+ R+LV EM ++G L+
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +I GL G++ +A L E+ L G + + I GLC+ G+V +A+E K+
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 407 MADKDVSPGARVWEALL 423
M + +P + +L+
Sbjct: 625 MVLRGSTPDIVTFNSLI 641
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 187/429 (43%), Gaps = 81/429 (18%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENS-----------------------------QFC 97
+L ++Y+CEP ++Y+ V++ L + FC
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 98 ---DISSVLDHIE--KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK------IPKF- 145
+I S L + + I+ LI + + +R +++ L + +P
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 146 ----------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELL-- 191
+ +R+ A +++N M+ GF D T +++ +C+ + D + D
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 192 -------------GFVQE---------MKKLGFCFGMV----DYTNVIRSLVKKEKVFDA 225
GFV + + +G+V Y ++I K+ V A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
L +L+ M++ G KP++ YT++++G +A + +E+ GL P+ +N I+
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
CK++ + +++ M G KPDV T+N+L+ LC+V E+ L+++M +G+V N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
TY+ +I+ +G+I EA L+ E + +G ++ I GLC+ G V KA L +
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 406 QMADKDVSP 414
+M +P
Sbjct: 589 KMLRDGHAP 597
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 140/297 (47%), Gaps = 7/297 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ ++ A +LN M DG + + ++S+ C++ + E + +EM + G
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP--EAVEIFREMPRKGCKPD 493
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ + ++I L + +++ AL +L M S+G+ + V Y ++N + + + +A +L +
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G D TYN I GLC+ V+ + M G P I+ N L+ LC+
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ E KEM +G ++ T++ +I+GL G I + + + +G+ + F+
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS-----SVSKLDFVNTSF 437
+ LC+ G V A LL + + P R W LL S ++ + F N +F
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYNAAF 730
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 178/416 (42%), Gaps = 58/416 (13%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+ Y +I L N +F I +L + K E E +FI +++ Y A + L
Sbjct: 112 DVYQVLIGKLGANGEFKTIDRLLIQM-KDEGIVFKESLFISIMRDYDKAGFPGQTTRLML 170
Query: 141 KI-------PKFRINRVGFAIEIL---NC----------MINDGFCVDGKTCSLILSSVC 180
++ P F+ V +EIL NC M++ T +++ + C
Sbjct: 171 EMRNVYSCEPTFKSYNV--VLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
++ D L +++M K G V Y +I SL K +V +AL +L +M G PD
Sbjct: 229 AVNEI--DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI- 299
+ V+ G+ + +A ++ + +L+ G PD TY +NGLCK V+A +
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Query: 300 ---------------------------ACMEEL----GSKPDVITYNTLLQALCKVRELN 328
A + ++ G PDV TYN+L+ K +
Sbjct: 347 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E++ +M+ KG N+ +Y+I++DG G I EA +L E GL + F+ I
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
C+ + +A+E+ ++M K P + + L+S + ++D + + L D I
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS-LISGLCEVDEIKHALWLLRDMI 521
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S I+ S+C +D + EM++ G + Y ++I + DA +L +M
Sbjct: 259 SAIIDSLC--KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I PD+V Y ++N + + + +A EL+DE+L G++P+ TYN I+G CKQ+ +
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+A M M G PDV T+ TL+ C + ++ EL+ EM +G+V N TY+ +
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I G GD+ A L ++ ++ G+C + + GLC G ++ ALE+ K M
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 491
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSL 174
F F LI Y A R D + L +++P+ + N V + N +I+ GFC+ G
Sbjct: 396 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY-----NTLIH-GFCLVG----- 444
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
DL++ L Q+M G C +V ++ L K+ DAL + M+
Sbjct: 445 ---------DLNA--ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 493
Query: 235 -----------DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+G++PD++ Y +++ G+I + +++AEEL++E+ G+VPD TY+ I
Sbjct: 494 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 553
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+GLCKQ+ ++ +M M P+V+T+NTL+ CK ++ EL EM +GIV
Sbjct: 554 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 613
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ Y +I G G+I A + +E ++ G+ + + G + + +A+ +
Sbjct: 614 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 673
Query: 404 LKQM 407
L+ +
Sbjct: 674 LEDL 677
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 161/353 (45%), Gaps = 34/353 (9%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I +L ++ + D ++ ++++ F P+ F + +I + + R+ D+ L +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIF--PDLFTYNSMIVGFCSSGRWSDAEQLLQE 315
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ + +I+ + N +IN F +GK + EL EM G
Sbjct: 316 MLERKISP---DVVTYNALIN-AFVKEGKF-------------FEAAELY---DEMLPRG 355
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+ Y ++I K++++ A + M + G PD+ +T +++G +
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGM 415
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
EL E+ GLV + TYN I+G C ++ A + + M G PD++T NTLL L
Sbjct: 416 ELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 475
Query: 322 CKVRELNRLRELVKEMK-----------WKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
C +L E+ K M+ + G+ ++ TY+I+I GL ++G +EA L E
Sbjct: 476 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 535
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E ++G+ + + I GLC++ + +A ++ M K SP + L+
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 588
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 131/262 (50%), Gaps = 9/262 (3%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ Q+M++ + + +I+ K+ AL ++ G+ PD+V +T +
Sbjct: 96 DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ V++ +A + F ++ P+V T+ +NGLC++ + + ++ M E G
Sbjct: 156 LHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215
Query: 308 KPDVITYNTLLQALCK----VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+P ITY T++ +CK V LN LR++ +E+ I+ N+ YS +ID L G
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKM-EEVSH--IIPNVVIYSAIIDSLCKDGRHS 272
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A L E KG+ ++ I G C G A +LL++M ++ +SP + AL+
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 424 LSSVSKLDFVNTSFIRLVDQIL 445
+ V + F + L D++L
Sbjct: 333 NAFVKEGKFFEAA--ELYDEML 352
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 13/293 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R+ A ++ M G D T + ++ C + + D+ + + EM + G V
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI--DDGMELLHEMPRRGLVANTV 431
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + AL + QM S G+ PDIV +L+G+ A E+F +
Sbjct: 432 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 491
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
G+ PDV TYN+ I GL + ++ M G PD ITY++
Sbjct: 492 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M K N+ T++ +I+G G + + L E +G
Sbjct: 552 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + ++ I G + G + AL++ ++M V P +L SK
Sbjct: 612 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 664
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 83/202 (41%), Gaps = 36/202 (17%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +LF ++L +P V + + + + + I + ME + D+ ++N L++
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 320 ALCKVREL--------------------------------NRLRE---LVKEMKWKGIVL 344
C +L +R+ E +M
Sbjct: 123 CFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRP 182
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ T++ +++GL +G I+EA LL+ + GL + + G+C++G AL LL
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 405 KQMAD-KDVSPGARVWEALLLS 425
++M + + P ++ A++ S
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDS 264
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 175/388 (45%), Gaps = 20/388 (5%)
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
++P + LL Y CEP Y+ ++ +L ++ ++ D + L + R + + F
Sbjct: 320 ERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN-LAQMMLRRDCKPSHFT 378
Query: 119 FIDLIKTYADAHRFQDSVNLF--------------YKI---PKFRINRVGFAIEILNCMI 161
F +I + + + LF Y I R NR+ A ++L M
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
G D T + I+S +C+ + DE + ++ G+ +V + +I L K +
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQV--DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 496
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ DA +L +M+ +G PD+V YT++++G + K+ F E+L G VP V TY++
Sbjct: 497 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 556
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+ LCK V G ++ M E G PD I Y +++ LCK + EL K MK G
Sbjct: 557 VIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ TY++++D L + EA LLE + G + ++ G + KA
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAF 676
Query: 402 ELLKQMADKDVSPGARVWEALLLSSVSK 429
L + M + SP ++ LL V++
Sbjct: 677 RLFQAMKSRGCSPTPFMYSLLLTKLVAE 704
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 33/264 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS------------------ 187
+ ++V A E+ + N G+ +D TCS ++ +C+ R L
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517
Query: 188 ---------------DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
D+ L F EM G ++ Y+ VI L K +V D +L M
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 577
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G+ PD + YT V++G+ + Y +A EL+ + G P V TYNV ++ LCK + +
Sbjct: 578 LERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRL 637
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ I ++ ME G PD +TYN++ K E ++ L + MK +G YS++
Sbjct: 638 DEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLL 697
Query: 353 IDGLASKGDIIEACGLLEEALNKG 376
+ L ++ + +A + EEAL G
Sbjct: 698 LTKLVAEEKMDQAMEIWEEALEAG 721
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT ++ +L K ++ DA IL M G P++V Y ++NG + +A LF+
Sbjct: 236 VITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFN 295
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL---- 321
++L PDV+TYN+ I+G CKQ + G K++ M + G +P+ ITYNTL+ +L
Sbjct: 296 QMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 355
Query: 322 -------------------------------CKVRELNRLRELVKEMKWKGIVLNLQTYS 350
CKV +L+ EL + M +G + ++ TY+
Sbjct: 356 KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYN 415
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
IMI G I +A LLE G ++ + GLC+ V +A E+
Sbjct: 416 IMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 4/261 (1%)
Query: 164 GFCV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
G C D T S +++ C+ RD + + EM+K G Y +I+ L +V
Sbjct: 161 GLCSPDSITYSTLINGFCKARDFQ--QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRV 218
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
AL M+ + P ++ YT++++ + A + ++++ G P+V TYN
Sbjct: 219 DSALVHYRDMQRN-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTL 277
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
ING CK N++ + + M E PDV TYN L+ CK +L++EM G
Sbjct: 278 INGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 337
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
N TY+ ++D L G I+A L + L + F+ I C+ G + A E
Sbjct: 338 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 397
Query: 403 LLKQMADKDVSPGARVWEALL 423
L + M D+ P + ++
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMI 418
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 10/263 (3%)
Query: 195 QEMKKLGFCFGMVDYTN-------VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+ +K +C G Y + ++ + V+K+K +A + + PD + Y+ +
Sbjct: 114 KAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTL 173
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG D+ +A L DE+ G+VP YN I GLC V++ + M+
Sbjct: 174 INGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NC 232
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P VITY L+ ALCK ++ ++++M G N+ TY+ +I+G G++ EA
Sbjct: 233 APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVV 292
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L + L ++ I G C++ + +LL++M P + L+ S V
Sbjct: 293 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 352
Query: 428 SKLDFVNTSFIRLVDQILNTPCK 450
+++ L +L CK
Sbjct: 353 KSGKYIDA--FNLAQMMLRRDCK 373
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 164/391 (41%), Gaps = 23/391 (5%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C P Y +I + F +LD +EKR ++ +IK D R DS
Sbjct: 163 CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKR-GIVPHNAVYNTIIKGLCDNGRV-DS 220
Query: 136 VNLFYK------IPKF-----------RINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+ Y+ P + R+ A IL MI G + T + +++
Sbjct: 221 ALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 280
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
C+ ++ DE + +M + + Y +I K+E+ D +L +M G +
Sbjct: 281 FCKLGNM--DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 338
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P+ + Y +++ ++ Y+ A L +L P +T+N+ I+ CK ++ ++
Sbjct: 339 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 398
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M + G PD+ TYN ++ C+ ++ R+L++ M G ++ TY+ ++ GL
Sbjct: 399 FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCK 458
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+ EA + E N G I GLC+ + A +LL++M +P
Sbjct: 459 ASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVA 518
Query: 419 WEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+ +L+ K D ++ S + ++L+ C
Sbjct: 519 Y-TILIHGFCKADQLDKS-LAFFSEMLDKGC 547
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 2/171 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV +L M+ G D + ++ +C+ S DE + MK+ G +V
Sbjct: 566 RVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSD--SYDEAYELYKLMKQTGCAPTVVT 623
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ L K ++ +A+ +L M+SDG PD V Y V +G ++ KA LF +
Sbjct: 624 YNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMK 683
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
G P + Y++ + L + ++ +++ E G+ D TL Q
Sbjct: 684 SRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTLQQ 734
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 132/262 (50%), Gaps = 2/262 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EI M+ G D + S +++ R L D+ L + ++MKK G V YT +
Sbjct: 242 AKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHL--DQALVYFRDMKKFGLVPDNVIYTVL 299
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + + +AL I ++M G D++ Y +LNG+ ++ A++LFDE++ G
Sbjct: 300 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 359
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD YT+ I+G C+ N+ + + M + KPD++ YNTL+ CKV E+ + E
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L M + I N TY I+I+ S G + EA L + + KG+ + I G C
Sbjct: 420 LWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYC 479
Query: 393 QRGLVRKALELLKQMADKDVSP 414
+ G KA E L +M K V+P
Sbjct: 480 RSGDSSKADEFLGRMIAKGVAP 501
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 161/330 (48%), Gaps = 19/330 (5%)
Query: 111 NFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFA 153
N T +F LI+TY A + ++ F + +I+ V A
Sbjct: 43 NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
E+ ++ G ++ T +++++++C +D D++ F+ EM+ G MV Y +I
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALC--KDGKFDDVKSFLSEMEGNGIYADMVTYNTLI 160
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
+ ++ + +A I+N M G+KP + Y ++NG+ + Y +A+ + E+L +GL
Sbjct: 161 GAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLS 220
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PD TYN + C+++N ++ M G PD++++++L+ + R L++
Sbjct: 221 PDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVY 280
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
++MK G+V + Y++++ G G+++EA + +E L +G ++ + GLC+
Sbjct: 281 FRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCK 340
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
++ A +L +M ++ P + L+
Sbjct: 341 EKMLTDADKLFDEMVERGALPDFYTFTTLI 370
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 151/293 (51%), Gaps = 4/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++I + M+ G +D + IL+ +C+++ L+ + L EM + G +T +
Sbjct: 312 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKL--FDEMVERGALPDFYTFTTL 369
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + AL + M IKPDIV Y +++G + KA EL+D ++ +
Sbjct: 370 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 429
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TY + IN C +V ++ M E G KP ++T NT+++ C+ + ++ E
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 489
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ M KG+ + +Y+ +I+G + ++ +A + + +GL ++ + G C
Sbjct: 490 FLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFC 549
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
++G +++A +L++M +K ++P + AL+ V++ D +N +F R D++L
Sbjct: 550 RQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQ-DNLNEAF-RFHDEML 600
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 164 GFCVDGK-TCSLILSSVCEQRDLSSDELL------GF--VQEMKKLGFCF-GMVD----- 208
G C DG T +L L QR++ D + GF V EM+K + GM+
Sbjct: 372 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 431
Query: 209 ----YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
Y +I + V +A + + M GIKP +V V+ G D KA+E
Sbjct: 432 NHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL 491
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G+ PD +YN ING +++N++ I ME+ G PD+ITYN ++ C+
Sbjct: 492 GRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQ 551
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
+ ++++M KGI + TY+ +I+G ++ ++ EA +E L +G
Sbjct: 552 GRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFA 605
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 25/247 (10%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
SL + + N +P AY+ +I + + S + D + R+ F P I + LI
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIF--PNHITYGILIN 441
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
Y + V A + + MI G TC+ ++ C D
Sbjct: 442 AYCS------------------VGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGD 483
Query: 185 LS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
S +DE LG M G + Y +I V+++ + A +N+M+ +G+ PDI+
Sbjct: 484 SSKADEFLG---RMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIIT 540
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y +V+NG Q +AE + +++ G+ PD TY ING Q+N+ + M
Sbjct: 541 YNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEML 600
Query: 304 ELGSKPD 310
+ G PD
Sbjct: 601 QRGFAPD 607
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+ E F L G + + N + GL K + VE ++ + G + +V T N ++
Sbjct: 66 EGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMV 125
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
ALCK + + ++ + EM+ GI ++ TY+ +I +G + EA ++ +KGL
Sbjct: 126 NALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLK 185
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
++ I GLC++G +A +L +M + +SP + LL+ S + +F
Sbjct: 186 PSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNF 239
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 169/353 (47%), Gaps = 21/353 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL CEP Y+ +I + + ++L + + + ++K+
Sbjct: 219 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSH-GCKPDAVTYTPVLKSL 277
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ R+++ LF + M ++ D T + I++S+C+Q +
Sbjct: 278 CGSERWKEVEELFAE------------------MASNKCAPDEVTFNTIVTSLCQQGLV- 318
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + V M + G +V Y++++ L +V DA+ +L+++KS G KPD + YT
Sbjct: 319 -DRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTT 377
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
VL G+ E + AEEL E++ PD T+N I LC++ V+ IK++ M E G
Sbjct: 378 VLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD++TYN+++ LC R ++ EL+ ++ G ++ T++ ++ GL S +A
Sbjct: 438 CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAE 497
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
L+ ++ ++ F+ I LCQ+GL+ +A+E LK MA+ P +
Sbjct: 498 QLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTY 550
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 8/219 (3%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +IR+L + +V DAL + + M G P +V Y+++L+ Y +A L DE+
Sbjct: 165 FNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMR 224
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD+ TYNV IN +C + +V+ + +++ + G KPD +TY +L++LC
Sbjct: 225 AKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWK 284
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG----LCTQSSMF 384
+ EL EM + T++ ++ L +G + A +++ G + T SS+
Sbjct: 285 EVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSIL 344
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
D GLC G V A+ELL ++ P + +L
Sbjct: 345 D----GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVL 379
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 170/377 (45%), Gaps = 24/377 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
L + C P ++ ++ +L + V+DH+ E+ P+ + + ++
Sbjct: 289 LFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMS--EHGCIPDIVTYSSILDG 346
Query: 126 YADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVD 168
D R D+V L ++ + I + A E++ M+ D
Sbjct: 347 LCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPD 406
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + +++S+C++ + D + V++M + G +V Y ++I L + + DA+ +
Sbjct: 407 EVTFNTVIASLCQKGLV--DRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMEL 464
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L+ ++S G KPDIV + +L G+ + + AE+L ++ PD T+N I LC+
Sbjct: 465 LSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQ 524
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ + I+ + M E G P+ TYN ++ AL K + +L+ M +L T
Sbjct: 525 KGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLIT 582
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ +I + G + EA LL ++ GL + + G+C+ +A+ +L ++
Sbjct: 583 YNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQ 642
Query: 409 DKDVSPGARVWEALLLS 425
D +SP A + +LL
Sbjct: 643 DMGLSPDATFYNDILLG 659
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 122/277 (44%), Gaps = 48/277 (17%)
Query: 213 IRSLVKKEKVFDALGILNQMKSD------------------------------------- 235
+RSL+++E++ DAL +++ + S
Sbjct: 65 LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL 124
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFD-ELLVLGL--VPDVYTYNVYINGLCKQNNV 292
G +V Y ++NG Y +A + D L+ G+ PD +T+N I LC + V
Sbjct: 125 GASATVVTYNTMVNG------YCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRV 178
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + M G P V+TY+ LL A CK + L+ EM+ KG ++ TY+++
Sbjct: 179 PDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVL 238
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+ + ++GD+ EA +L + + G + + + LC ++ EL +MA
Sbjct: 239 INAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC 298
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+P + +++S+ + V+ + I++VD + C
Sbjct: 299 APDEVTFNT-IVTSLCQQGLVDRA-IKVVDHMSEHGC 333
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 144/326 (44%), Gaps = 33/326 (10%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET----PEFI-FID 121
++ S C P Y+ +I L C+ + D +E N ++ P+ + F
Sbjct: 429 VVEQMSENGCNPDIVTYNSIIDGL------CNERCIDDAMELLSNLQSYGCKPDIVTFNT 482
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
L+K R++D+ L M++ D T + +++S+C+
Sbjct: 483 LLKGLCSVDRWEDAEQLMVN------------------MMHSDCPPDATTFNTVITSLCQ 524
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+ L + + ++ M + G Y V+ +L+K K +AL +L+ M + PD+
Sbjct: 525 KGLLL--QAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDL 580
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
+ Y V++ + +A +L ++ GL PD TY G+C+++ + I+M+
Sbjct: 581 ITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCR 640
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
++++G PD YN +L C+ + + M G + + TY I+++ LA +
Sbjct: 641 LQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECL 700
Query: 362 IIEACGLLEEALNKGLCTQSSMFDET 387
+ EA LL + G+ +S + +E+
Sbjct: 701 LDEAKQLLVNLCSLGVLDKSLIEEES 726
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 146/293 (49%), Gaps = 3/293 (1%)
Query: 132 FQDSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
F D+V I F ++ V A ++ + M D T + ++ +C+ + E
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMV--EA 401
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
EM G V YT +I K ++ +A + NQM G+ P++V YT + +G
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADG 461
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + A EL E+ GL P+VYTYN +NGLCK N+E +K++ M+ G PD
Sbjct: 462 LCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPD 521
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
ITY TL+ A CK+ E+ + EL++ M K + L T++++++G G + + L+E
Sbjct: 522 TITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIE 581
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L KG+ ++ F+ + C + +R E+ K M D+ V P + + L+
Sbjct: 582 WMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILI 634
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI + +++++ + G D + I+ +C+ ++ E L ++ M+K G
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQL--LRGMRKWGVFPD 346
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT VI K V A + ++M+ I PDIV YT V++G+ V+A E+F+
Sbjct: 347 NVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+LV GL PD TY I+G CK ++ + M + G P+V+TY L LCK
Sbjct: 407 EMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG 466
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E++ EL+ EM KG+ N+ TY+ +++GL G+I + L+EE G + +
Sbjct: 467 EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYT 526
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ C+ G + KA ELL+ M +K + P + L+
Sbjct: 527 TLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLM 564
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 148/305 (48%), Gaps = 10/305 (3%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE---ILNCMINDGFCVDGKTCSLILSS 178
LI TY D +L++++ + GF +E + + ++ G V +C+L LS
Sbjct: 160 LIYTYKDWGSHPLVFDLYFQV----LVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSR 215
Query: 179 V-CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+ C + + +E +LG C+ V V+ L + KV +A +L QM G
Sbjct: 216 LSCNFEGIKIA--VKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGN 273
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PD+V Y +V++G + K +L DEL GL PD Y YN I LCK V +
Sbjct: 274 FPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQ 333
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M + G PD + Y T++ CK+ ++ +L EM+ K IV ++ TY+ +I G+
Sbjct: 334 LLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGIC 393
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G ++EA + E L KGL + I G C+ G +++A + QM K ++P
Sbjct: 394 KSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVV 453
Query: 418 VWEAL 422
+ AL
Sbjct: 454 TYTAL 458
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 129/267 (48%), Gaps = 10/267 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A + N M+ G + T + + +C+ ++ ++ELL EM + G + Y
Sbjct: 436 AFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELL---HEMSRKGLQPNVYTYNT 492
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ L K + + ++ +M G PD + YT +++ + KA EL +L
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P + T+NV +NG C +E G ++I M E G P+ T+N+L++ C +
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E+ K M +G++ + TY+I+I G ++ EA L +E + KG ++ +D I G
Sbjct: 613 EIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672
Query: 392 CQRGLVRKALELLKQM------ADKDV 412
+R +A +L ++M A+KD+
Sbjct: 673 YKRKKFVEARKLFEEMRKHGLVAEKDI 699
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+ A E+L+ M G + T + I++ +C+ ++ ++ + ++EM GF + Y
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNI--EQTVKLMEEMDLAGFYPDTITY 525
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T ++ + K ++ A +L M + ++P +V + +++NG + E L + +L
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G++P+ T+N + C +NN+ A ++ M + G PD TYN L++ CK R +
Sbjct: 586 KGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKE 645
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L KEM KG + TY +I G + +EA L EE GL + ++D
Sbjct: 646 AWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYD 701
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 96/216 (44%), Gaps = 2/216 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I + ++++ M GF D T + ++ + C+ +++ L + K+L
Sbjct: 499 KIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT-- 556
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ + D ++ M GI P+ + ++ ++ + E++
Sbjct: 557 LVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYK 616
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G++PD TYN+ I G CK N++ + M E G TY+ L++ K +
Sbjct: 617 AMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRK 676
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
+ R+L +EM+ G+V Y I +D +G+
Sbjct: 677 KFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGN 712
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 156/292 (53%), Gaps = 3/292 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + G A+E+ + M+ G+ D T + I++ +C+ + + G ++M + G
Sbjct: 204 KVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAA--GLFRKMGEAGCQPD 261
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+ +I SL K +V +AL I + MK+ GI P+I Y ++ G+ + +A + +
Sbjct: 262 VVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLN 321
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ L ++P++ T+++ IN CK+ NV ++ M E+G +P+V+TY++L+
Sbjct: 322 EMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQA 381
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+ R+L M KG ++ +Y+I+I+G I EA L E +++GL ++
Sbjct: 382 EVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYN 441
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
I GLCQ G +R+A +L K M P + ++LL K ++ +F
Sbjct: 442 TLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY-SILLDGFCKQGYLAKAF 492
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 143/275 (52%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A++I + M G + T + ++ +C E + EM L +V
Sbjct: 277 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR--EASAMLNEMMSLNIMPNIVT 334
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
++ +I K+ VF+A G+L M G++P++V Y+ ++NG +Q + V+A +LFD ++
Sbjct: 335 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMI 394
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PDV++YN+ ING CK + ++ M G PD+++YNTL+ LC++ L
Sbjct: 395 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 454
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L K M G + +L TYSI++DG +G + +A L + L M++ I
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 514
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+C+ +++A +L ++ + + P +++ ++
Sbjct: 515 DAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTII 549
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 169/359 (47%), Gaps = 21/359 (5%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+ L C+P Y +I +L ++ + + + ++ K + F + LI+
Sbjct: 247 AGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM-KAKGISPNIFTYNSLIQ 305
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ R+++ A +LN M++ + T SL+++ C++ +
Sbjct: 306 GLCNFSRWRE------------------ASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 347
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ E G ++ M ++G +V Y++++ + +V +A + + M + G KPD+ Y
Sbjct: 348 VF--EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSY 405
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++NG + +A++LF+E++ GL PD+ +YN I+GLC+ + + M
Sbjct: 406 NILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLT 465
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G+ PD+ TY+ LL CK L + L + M+ + N+ Y+I+ID + ++ E
Sbjct: 466 NGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKE 525
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A L E +GL ++ I GLC+ GL+ +ALE + M + P + ++
Sbjct: 526 ARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVII 584
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 3/276 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ + R D ++ ++M+ G +I + ++V +L ++
Sbjct: 127 LLSAIVKMRHYH-DAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIK 185
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G++ IV + ++NG+ + +A ELFD+++ G PDV+TY INGLCK A
Sbjct: 186 LGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVA 245
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ M E G +PDV+TY+T++ +LCK R +N ++ MK KGI N+ TY+ +I
Sbjct: 246 AAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQ 305
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL + EA +L E ++ + F I C+ G V +A +LK M + V P
Sbjct: 306 GLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEP 365
Query: 415 GARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ +L+ + + V +L D ++ CK
Sbjct: 366 NVVTYSSLMNGYSLQAEVVEAR--KLFDVMITKGCK 399
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 2/235 (0%)
Query: 191 LGF--VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
LGF + ++ KLG +V + +I L K K A+ + + M + G +PD+ YT ++
Sbjct: 175 LGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTII 234
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG+ + V A LF ++ G PDV TY+ I+ LCK V + + + M+ G
Sbjct: 235 NGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGIS 294
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P++ TYN+L+Q LC ++ EM I+ N+ T+S++I+ +G++ EA G+
Sbjct: 295 PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGV 354
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+ G+ + + G + V +A +L M K P + L+
Sbjct: 355 LKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILI 409
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 1/201 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-ELFDELLVLGLVPDVYTYNVY 282
DAL N M +P I+ + +L+ ++ Y A L ++ + GL PD YT ++
Sbjct: 104 DALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHML 163
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
IN + V+ G ++A + +LG + ++T+NTL+ LCKV + + EL +M +G
Sbjct: 164 INCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGY 223
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
++ TY+ +I+GL G+ + A GL + G + I LC+ V +AL+
Sbjct: 224 QPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 283
Query: 403 LLKQMADKDVSPGARVWEALL 423
+ M K +SP + +L+
Sbjct: 284 IFSYMKAKGISPNIFTYNSLI 304
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 105/203 (51%), Gaps = 2/203 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+G A ++ N MI+ G D + + ++ +C+ L E + M G
Sbjct: 414 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR--EAHDLFKNMLTNGNLPD 471
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+ ++ K+ + A + M+S +KP++V Y ++++ + + +A +LF
Sbjct: 472 LCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFS 531
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
EL V GL P+V Y INGLCK+ ++ ++ MEE G P+ +YN +++ + +
Sbjct: 532 ELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHK 591
Query: 326 ELNRLRELVKEMKWKGIVLNLQT 348
+ +R +L+ EM+ KG V ++ T
Sbjct: 592 DESRAVQLIGEMREKGFVADVAT 614
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 2/225 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + MI G D + +++++ C+ + + + L EM G +V Y +
Sbjct: 386 ARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL--FNEMIHQGLTPDIVSYNTL 443
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + ++ +A + M ++G PD+ Y+++L+G Q KA LF + L
Sbjct: 444 IDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYL 503
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ YN+ I+ +CK N++ K+ + + G +P+V Y T++ LCK L+ E
Sbjct: 504 KPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALE 563
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ M+ G N +Y+++I G D A L+ E KG
Sbjct: 564 AFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGF 608
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL-NRLRELVKEMKWKGIVLNLQTY 349
N++ + M +P +I +N LL A+ K+R + + L K+M+ G+ + T
Sbjct: 101 NIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTL 160
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
++I+ + +L + + GL F+ I GLC+ G +A+EL M
Sbjct: 161 HMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVA 220
Query: 410 KDVSPGARVWEALL 423
+ P + ++
Sbjct: 221 RGYQPDVHTYTTII 234
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++S +C DL E L + M + G + Y +I+ L + ++ DA G+ +M
Sbjct: 281 MISGMCRAGDLDGAETLH--RRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG 338
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+KP+ V +T++++ + D EL E+ G+ PD TYN +NGLC+ ++++
Sbjct: 339 RGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 398
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ M G +PD +TY TL+ CK EL+ E+ + M +G+ L+ TY+ +I
Sbjct: 399 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 458
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL+ G +A +L E + GL ++ + I C++G V+ L LLK+M +K P
Sbjct: 459 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 518
Query: 415 GARVWEALL 423
G + ++
Sbjct: 519 GVVTYNVIM 527
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 2/258 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ R+ A + M G + ++++ + C++ D ++ +L +EM++ G
Sbjct: 322 RVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD--AETMLELHREMRERGVRPD 379
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ L + + A GI+ +M+S G++PD V YT +++G +E+ A E+
Sbjct: 380 AVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQ 439
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ D TY I+GL K +++ M E G +PD TY ++ A C+
Sbjct: 440 NMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 499
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L+KEM+ KG + TY+++++G G + A LL +N G+ ++
Sbjct: 500 DVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYN 559
Query: 386 ETICGLCQRGLVRKALEL 403
+ G C+ G V EL
Sbjct: 560 ILLDGHCKHGKVTDIEEL 577
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 1/221 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++R LV+ ++ A + ++M+S G++ +V + +++G+ D AE L +
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ PDVYTY I GLC+ +E + M G KP+ + + L+ A CK +
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAE 362
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ EL +EM+ +G+ + TY+ +++GL D+ A G++ E + GL + + I
Sbjct: 363 TMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 422
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G C+ + A+E+ + M + V + A L+S +SK
Sbjct: 423 DGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA-LISGLSK 462
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 95/193 (49%)
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
Q+ G+ P+ + +++ ++ + A+ +FDE+ G+ V ++N I+G+C+
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+++ + M E G PDV TY L+Q LC+V + R + ++M +G+ N ++
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+ID KGD L E +G+ + ++ + GLC+ ++ A ++ +M
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409
Query: 411 DVSPGARVWEALL 423
+ P + L+
Sbjct: 410 GLRPDTVTYTTLI 422
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 148/273 (54%), Gaps = 4/273 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S+++ S+C +D S D+ L EM+ G +V Y+++I L K D +L +M
Sbjct: 278 SIVIDSLC--KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I PD+V ++ +++ + + ++A+EL++E++ G+ PD TYN I+G CK+N +
Sbjct: 336 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 395
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+M M G +PD++TY+ L+ + CK + ++ L +E+ KG++ N TY+ +
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ G G + A L +E +++G+ + + GLC G + KALE+ ++M +
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515
Query: 413 SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ G ++ ++ + + SK+D + F L D+
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 548
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 138/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + N M G D T S ++ +C D D+ ++EM +V ++ +
Sbjct: 293 ALSLFNEMEMKGIKADVVTYSSLIGGLCN--DGKWDDGAKMLREMIGRNIIPDVVTFSAL 350
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I VK+ K+ +A + N+M + GI PD + Y +++G + +A ++FD ++ G
Sbjct: 351 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 410
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ TY++ IN CK V+ G+++ + G P+ ITYNTL+ C+ +LN +E
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +EM +G+ ++ TY I++DGL G++ +A + E+ + +++ I G+C
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 530
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
V A L ++DK V P + ++
Sbjct: 531 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 561
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+ +++ M+ GF D T +L+ +C+ + S L ++M++ +V
Sbjct: 218 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN--SALALDLFRKMEERNIKASVV 275
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ VI SL K DAL + N+M+ GIK D+V Y+ ++ G+ + ++ E+
Sbjct: 276 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ ++PDV T++ I+ K+ + ++ M G PD ITYN+L+ CK L
Sbjct: 336 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 395
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++ M KG ++ TYSI+I+ + + L E +KGL + ++
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G CQ G + A EL ++M + V P + LL
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 491
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +LGF + M+ G M T +I +K+K+ A +L + G +PD + ++ +
Sbjct: 116 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 175
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG ++ +A L D ++ + PD+ T + INGLC + V + +I M E G
Sbjct: 176 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF 235
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD +TY +L LCK +L ++M+ + I ++ YSI+ID L G +A
Sbjct: 236 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 295
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E KG+ + I GLC G ++L++M +++ P + AL+
Sbjct: 296 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 351
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 164/369 (44%), Gaps = 24/369 (6%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y +P Y V+ L ++ + +E+R N + + +I + F
Sbjct: 233 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFD 291
Query: 134 DSVNLF--YKIPKFRINRVGFAIEILNCMINDGFCVDGKT-----------------CSL 174
D+++LF ++ + + V ++ ++ + NDG DG +L
Sbjct: 292 DALSLFNEMEMKGIKADVVTYS-SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I V E + L + EL EM G + Y ++I K+ + +A + + M S
Sbjct: 351 IDVFVKEGKLLEAKELY---NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 407
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +PDIV Y++++N + LF E+ GL+P+ TYN + G C+ + A
Sbjct: 408 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 467
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ M G P V+TY LL LC ELN+ E+ ++M+ + L + Y+I+I
Sbjct: 468 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 527
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G+ + + +A L +KG+ ++ I GLC++G + +A L ++M + +P
Sbjct: 528 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 587
Query: 415 GARVWEALL 423
+ L+
Sbjct: 588 DDFTYNILI 596
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 138/280 (49%), Gaps = 2/280 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ FA +L G+ D T S +++ C + +S E + V M ++
Sbjct: 146 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS--EAVALVDRMVEMKQRPD 203
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + +I L K +V +AL ++++M G +PD V Y VLN + + A +LF
Sbjct: 204 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 263
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + V Y++ I+ LCK + + + + ME G K DV+TY++L+ LC
Sbjct: 264 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 323
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + ++++EM + I+ ++ T+S +ID +G ++EA L E + +G+ + ++
Sbjct: 324 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 383
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I G C+ + +A ++ M K P + L+ S
Sbjct: 384 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 423
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 124/252 (49%), Gaps = 2/252 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + M++ G D T S++++S C+ + + D+ + +E+ G + Y +
Sbjct: 398 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV--DDGMRLFREISSKGLIPNTITYNTL 455
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K+ A + +M S G+ P +V Y ++L+G+ + KA E+F+++ +
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ YN+ I+G+C + V+ + + + G KPDV+TYN ++ LCK L+
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 575
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++MK G + TY+I+I +I + L+EE G SS I L
Sbjct: 576 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 635
Query: 393 QRGLVRKALELL 404
R L + L++L
Sbjct: 636 DRRLDKSFLDML 647
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 183/408 (44%), Gaps = 38/408 (9%)
Query: 42 VKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISS 101
V S P Q Q K H L S L + N +Y T N+ D S
Sbjct: 17 VPDSHFVPKKFQSFQFLKNTHFLISFLILLTKINFI----SYSSTSTTFHSNNDVDDAVS 72
Query: 102 VLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC-- 159
+ + + R+N P F F ++ + + + ++L K+ +FR G + NC
Sbjct: 73 LFNRLL-RQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKM-EFR----GIKPNLFNCNI 126
Query: 160 ------------------------MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
++ GF +D + ++ +C+ + + L +Q
Sbjct: 127 LIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGE--TRAALDLLQ 184
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+ V Y VI + K + V DA + ++M S GI P++V Y+ +++G V
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A +LF+++++ + PD YT+N+ ++G CK ++ G + A M + G PDV+TYN
Sbjct: 245 KLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYN 304
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+L+ C V+E+N + + M G+ ++++Y+I+I+G + +A L E K
Sbjct: 305 SLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCK 364
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I GL + G + AL+L+ QM D+ V P + +++
Sbjct: 365 NIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSII 412
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 146/281 (51%), Gaps = 17/281 (6%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + ++ AI++ N +I + DG T ++++ C+ R + + + F MK+ G
Sbjct: 241 FVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTV-FAMMMKQ-GIIP 298
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y +++ ++V A I N M G+ PDI Y +++NG + KA LF
Sbjct: 299 DVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 358
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+E+ ++P+V TYN I+GL K + ++++ M + G P+++TYN+++ AL K
Sbjct: 359 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 418
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++++ L+ + K +GI ++ TY+I+IDGL C + +G + +
Sbjct: 419 HQVDKAIALITKFKDQGIQPSMYTYTILIDGL---------CKV------EGYDITVNTY 463
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ I G C++GL +AL LL +M D P A +E + S
Sbjct: 464 NVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRS 504
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ V A I N M G D ++ +++++ C+ + + D+ + EM +
Sbjct: 313 VKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKV--DKAMNLFNEMHCKNIIPNV 370
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K ++ AL +++QM G+ P+I+ Y +++ + KA L +
Sbjct: 371 VTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITK 430
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
G+ P +YTY + I+GLCK VE G V TYN ++ CK
Sbjct: 431 FKDQGIQPSMYTYTILIDGLCK---VE------------GYDITVNTYNVMIHGFCKKGL 475
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ L+ +MK + N TY I I L + +A L E + +GL +S+ +
Sbjct: 476 FDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASY 533
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 177/416 (42%), Gaps = 50/416 (12%)
Query: 44 QSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEP-------------PPE----AYHFV 86
+L+ PP + P SLL FS Y P PP Y+ +
Sbjct: 81 HALSPPPLR-----PLFDRTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNAL 135
Query: 87 IKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIP--K 144
I+ L + L + R + F F LI Y + + +LF K+P
Sbjct: 136 IRALCRRADLRHAQRYLS-LMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRG 194
Query: 145 FRINRVGFAIEILNCMINDGFCVDGK-----------------TCSLILSSVCEQRDLSS 187
F + V +A I +GFC G+ T + ++ +C+ R
Sbjct: 195 FSQDAVSYAALI------EGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDAR--RG 246
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E L +Q+MK+LG+ Y ++ +++K +A +LN+M +G+ P V T V
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+N + A +F+ + + G P+V+TYN + G C V + ++ M E G
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV 366
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDV+TYN L++ C + L++ M+ G+ + TY+++ID L G + EAC
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + +G+ S F+ I GLC+ G A L++M +P + +
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 160/395 (40%), Gaps = 57/395 (14%)
Query: 96 FCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYKIPKF--------- 145
FC+ V + +E E P+ + L+K DA R ++ + + K+ +
Sbjct: 209 FCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAY 268
Query: 146 --------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
R + A ++LN M ++G TC+ ++++ C + +S + + M
Sbjct: 269 AALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSG--AVRVFESM 326
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV------ 251
K G + Y +++ KV+ A+ +L+QM+ G++PD+V Y +++ G
Sbjct: 327 KLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHI 386
Query: 252 --------------IVQEDYV---------------KAEELFDELLVLGLVPDVYTYNVY 282
+ + Y +A LFD L G+ P+ T+N
Sbjct: 387 ESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
INGLCK + + M G PD TY+ ++ LCK + + EM K +
Sbjct: 447 INGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDV 506
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ Y+I+ID L + + A + + ++ G + ++ C G + +A
Sbjct: 507 KPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAEN 566
Query: 403 LLKQMADKDVSPGARVWEALL--LSSVSKLDFVNT 435
++ +M + A + L+ +S+ K D T
Sbjct: 567 VVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVT 601
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 2/219 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +L M +G D T ++++ ++C+ + DE ++ G V + V
Sbjct: 389 AFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV--DEACSLFDGLEYRGIRPNSVTFNTV 446
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K K A L +M S G PD Y+ + + + + DE+L +
Sbjct: 447 INGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDV 506
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P Y + I+ L K+ N ++ M LG PDV+TY T ++A C L+
Sbjct: 507 KPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAEN 566
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+V EMK GI+++ Y+ +IDG S G A +L+
Sbjct: 567 VVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKH 605
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
E+ M + + IL E+R L DE+ V MK+ YT+++
Sbjct: 651 FELFELMKKNSVPSSARAYLAILEGFSEERRL--DEVTSLVSHMKEDDLPLNEDIYTSLV 708
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
K DA +L M G P+++ Y +L+G + +A+E+F L
Sbjct: 709 NCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYN 768
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
D + + I+GL +Q + + MI+ +E++ KP TY L + L
Sbjct: 769 TDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV--LGL 272
S+ K ++ D + MK + + Y +L G + + L + L L
Sbjct: 640 SVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPL 699
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D+YT +N CK ++ M G P++I+Y LL + +R +E
Sbjct: 700 NEDIYT--SLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKE 757
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ + ++WK + + I+IDGL +G
Sbjct: 758 IFRGLRWKEYNTDEIVWKIIIDGLIRQG 785
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 148/273 (54%), Gaps = 4/273 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S+++ S+C +D S D+ L EM+ G +V Y+++I L K D +L +M
Sbjct: 249 SIVIDSLC--KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I PD+V ++ +++ + + ++A+EL++E++ G+ PD TYN I+G CK+N +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+M M G +PD++TY+ L+ + CK + ++ L +E+ KG++ N TY+ +
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ G G + A L +E +++G+ + + GLC G + KALE+ ++M +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 413 SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ G ++ ++ + + SK+D + F L D+
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 138/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + N M G D T S ++ +C D D+ ++EM +V ++ +
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCN--DGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I VK+ K+ +A + N+M + GI PD + Y +++G + +A ++FD ++ G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ TY++ IN CK V+ G+++ + G P+ ITYNTL+ C+ +LN +E
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +EM +G+ ++ TY I++DGL G++ +A + E+ + +++ I G+C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
V A L ++DK V P + ++
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+ +++ M+ GF D T +L+ +C+ + S L ++M++ +V
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN--SALALDLFRKMEERNIKASVV 246
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ VI SL K DAL + N+M+ GIK D+V Y+ ++ G+ + ++ E+
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ ++PDV T++ I+ K+ + ++ M G PD ITYN+L+ CK L
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++ M KG ++ TYSI+I+ + + L E +KGL + ++
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G CQ G + A EL ++M + V P + LL
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +LGF + M+ G M T +I +K+K+ A +L + G +PD + ++ +
Sbjct: 87 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 146
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG ++ +A L D ++ + PD+ T + INGLC + V + +I M E G
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF 206
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD +TY +L LCK +L ++M+ + I ++ YSI+ID L G +A
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E KG+ + I GLC G ++L++M +++ P + AL+
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 164/369 (44%), Gaps = 24/369 (6%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y +P Y V+ L ++ + +E+R N + + +I + F
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFD 262
Query: 134 DSVNLF--YKIPKFRINRVGFAIEILNCMINDGFCVDGKT-----------------CSL 174
D+++LF ++ + + V ++ ++ + NDG DG +L
Sbjct: 263 DALSLFNEMEMKGIKADVVTYS-SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I V E + L + EL EM G + Y ++I K+ + +A + + M S
Sbjct: 322 IDVFVKEGKLLEAKELY---NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +PDIV Y++++N + LF E+ GL+P+ TYN + G C+ + A
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ M G P V+TY LL LC ELN+ E+ ++M+ + L + Y+I+I
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G+ + + +A L +KG+ ++ I GLC++G + +A L ++M + +P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 415 GARVWEALL 423
+ L+
Sbjct: 559 DDFTYNILI 567
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 138/280 (49%), Gaps = 2/280 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ FA +L G+ D T S +++ C + +S E + V M ++
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS--EAVALVDRMVEMKQRPD 174
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + +I L K +V +AL ++++M G +PD V Y VLN + + A +LF
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + V Y++ I+ LCK + + + + ME G K DV+TY++L+ LC
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + ++++EM + I+ ++ T+S +ID +G ++EA L E + +G+ + ++
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 354
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I G C+ + +A ++ M K P + L+ S
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 124/252 (49%), Gaps = 2/252 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + M++ G D T S++++S C+ + + D+ + +E+ G + Y +
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV--DDGMRLFREISSKGLIPNTITYNTL 426
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K+ A + +M S G+ P +V Y ++L+G+ + KA E+F+++ +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ YN+ I+G+C + V+ + + + G KPDV+TYN ++ LCK L+
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++MK G + TY+I+I +I + L+EE G SS I L
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Query: 393 QRGLVRKALELL 404
R L + L++L
Sbjct: 607 DRRLDKSFLDML 618
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 142/272 (52%), Gaps = 9/272 (3%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQ---RDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
+L M GF +D TC++++ S+CE+ +D+S F + M ++G +V+YT
Sbjct: 195 LLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE-----FFRRMLEMGTPPNVVNYTAW 249
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLG 271
I L K+ V A +L +M G+KP++ +T +++G+ +A LF +L+
Sbjct: 250 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSS 309
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+V+TY V I G C++ + ++ M E G KP+ TY TL+ CK +R
Sbjct: 310 YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 369
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL+ +MK +G + N+ TY+ +IDG KG I EA +L A ++GL + I
Sbjct: 370 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEH 429
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G + AL+L +M + P + +L+
Sbjct: 430 CKQGHITYALDLFDRMVENGCCPDIEAYTSLI 461
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 1/228 (0%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M + G C + ++ ++ KV + +L M G D T+V+ + +
Sbjct: 164 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 223
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ E F +L +G P+V Y +I+GLCK+ V+ ++ M G KP+V T+ T
Sbjct: 224 FKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 283
Query: 317 LLQALCKVRELNR-LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ LCK+ R R +K +K N+ TY++MI G +G + A LL + +
Sbjct: 284 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 343
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL ++ + I G C+ G +A EL+ +M + P + A++
Sbjct: 344 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVI 391
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 132/303 (43%), Gaps = 18/303 (5%)
Query: 122 LIKTYADAHRFQDSVNLFYKI-----PKFRINRVGF------------AIEILNCMINDG 164
++++ + RF+D F ++ P +N + A +L M+ G
Sbjct: 214 VVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG 273
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
+ T + ++ +C+ + F++ +K + + YT +I ++ K+
Sbjct: 274 LKPNVYTHTTLIDGLCKI-GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 332
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L +M G+KP+ YT ++ G + +A EL +++ G +P++YTYN I+
Sbjct: 333 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 392
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G CK+ ++ K++ G K D ITY L+ CK + +L M G
Sbjct: 393 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 452
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+++ Y+ +I + + E+ ++ L GL + I G C+ G AL +
Sbjct: 453 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVF 512
Query: 405 KQM 407
++M
Sbjct: 513 ERM 515
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ C + L+ E+L + M + G YT +I K A ++N
Sbjct: 316 TYTVMIGGYCREGKLARAEML--LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMN 373
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK +G P+I Y V++G + +A ++ GL D TY + I CKQ
Sbjct: 374 KMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQG 433
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ + + M E G PD+ Y +L+ C+ R++ ++ + G++ QTY+
Sbjct: 434 HITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYT 493
Query: 351 IMIDGLASKGDIIEACGLLEEALNKG 376
MI G G A + E + G
Sbjct: 494 SMIAGYCKVGRSTMALRVFERMVQNG 519
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 7/241 (2%)
Query: 212 VIRSLV----KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
V+R +V + ++ +A ++ +M+S G+ + VL + +V A ++FD +
Sbjct: 105 VMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGM 164
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ PD ++ + C++ VE ++A M G D T ++++LC+
Sbjct: 165 TRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRF 224
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ E + M G N+ Y+ IDGL + + +A +LEE + +GL
Sbjct: 225 KDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 284
Query: 388 ICGLCQRGLVRKALEL-LKQMADKDVSPGARVWEALLLSSV--SKLDFVNTSFIRLVDQI 444
I GLC+ G +A L LK + P + ++ KL +R+V+Q
Sbjct: 285 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 344
Query: 445 L 445
L
Sbjct: 345 L 345
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++N M +GF + T + ++ C++ + E ++ G F + YT +
Sbjct: 368 AFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKI--QEAYKVLRMATSQGLKFDKITYTIL 425
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ + AL + ++M +G PDI YT +++ Q ++++ FD+ L++GL
Sbjct: 426 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 485
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+P TY I G CK +++ M + G D I
Sbjct: 486 LPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSI 525
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 167/369 (45%), Gaps = 24/369 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
S+L S P Y+ +I L +NS + L H E F + LI
Sbjct: 272 SMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYL-HKLVNGGLEPDGFTYNTLIDG 330
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT-CSLILSSVCEQRD 184
Y Q+ A +IL I GF D T CSLI + +C+ +
Sbjct: 331 YCKMGMLQN------------------AEKILQGAICKGFVPDEFTYCSLI-NGLCQNDE 371
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ D L G ++ Y +I+ L ++ + AL ++N+M +G DI Y
Sbjct: 372 I--DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTY 429
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+V+NG+ A L ++ + G VPDV+T+N I+G CKQ +E I+++ M
Sbjct: 430 NLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWS 489
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PDVITYN++L L K + L E + M KG V N TY+I+ + L G + E
Sbjct: 490 HGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNE 549
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK-DVSPGARVWEALL 423
A L++E LNKG+ + F I G G ++ A +L ++M ++ VS + ++
Sbjct: 550 ALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMI 609
Query: 424 LSSVSKLDF 432
+ KLD
Sbjct: 610 NAFAEKLDL 618
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 178/373 (47%), Gaps = 26/373 (6%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
YNCEP +Y+ ++ L E+ F V F+ + + D + F
Sbjct: 105 YNCEPSVLSYNAIMNILVESGYFKQAHKV--------------FLRMKNVGIVPDVYTFT 150
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG-KTCSLILSSVCEQRDLSSDELLG 192
+ F R R A+ +LN M++ G ++ C+++ E + + EL
Sbjct: 151 IRIKSF-----CRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELF- 204
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+M ++G + + ++ +L KK +V ++ +LN++ G+ ++ + + + G+
Sbjct: 205 --NDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLC 262
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ A + D ++ GL PDV TYN I GLCK +NV K + + G +PD
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF 322
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYNTL+ CK+ L ++++ KG V + TY +I+GL +I A L A
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE-ALLLSSVSKLD 431
L KGL +++ I GLCQ GL+ +AL+++ +M++ S + +W L+++ + K+
Sbjct: 383 LGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCS--SDIWTYNLVINGLCKMG 440
Query: 432 FVNTSFIRLVDQI 444
V+ + + D I
Sbjct: 441 CVSDANNLMNDAI 453
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 37/251 (14%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDEL 267
Y ++S +K KV +A+ + +M +P ++ Y ++N ++V+ Y K A ++F +
Sbjct: 79 YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMN-ILVESGYFKQAHKVFLRM 137
Query: 268 LVLGLVPDVYTYNVYINGLCK-----------QNNVEAGIKMIAC--------------- 301
+G+VPDVYT+ + I C+ N V G ++ A
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197
Query: 302 ---------MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
M +G PDV T+N LL LCK E+ L+ ++ KG+ NL T++I
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I GL KG + A +L+ + +GL ++ ICGLC+ V +A + L ++ + +
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317
Query: 413 SPGARVWEALL 423
P + L+
Sbjct: 318 EPDGFTYNTLI 328
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 128/301 (42%), Gaps = 44/301 (14%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++++N M +G D T +L+++ +C+ +S L + + G+ + + +
Sbjct: 410 ALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNL--MNDAIAKGYVPDVFTFNTL 467
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL---FDELLV 269
I K+ K+ + ILN+M S G+ PD++ Y VLNG+ VK E+L F+ ++
Sbjct: 468 IDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGL---SKAVKNEDLMETFETMVE 524
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI----------------- 312
G VP+ TYN+ LCK V + ++ + G PD +
Sbjct: 525 KGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKG 584
Query: 313 -------------------TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
TYN ++ A + +L+ +L EM G + TY +MI
Sbjct: 585 AYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMI 644
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DG G+ L E + KG + F I LC + V +A++++ M +
Sbjct: 645 DGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIV 704
Query: 414 P 414
P
Sbjct: 705 P 705
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +V A+++++ ++N G D + + I+S DL G Q +++G +
Sbjct: 543 KAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLK-----GAYQLFRRMGEQYK 597
Query: 206 M----VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+ Y +I + +K + + +M + G PD Y ++++G + +
Sbjct: 598 VSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGY 657
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ E++ G +P + T+ IN LC Q+ V + +I M G P+V+ N++ +A
Sbjct: 658 KFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV--NSISEAD 715
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
KV + +V E K + Y ++ DG+ K
Sbjct: 716 KKVVAAPK---IVVEDLLKRSCITYYAYELLYDGIRDK 750
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++S +C DL E L + M + G + Y +I+ L + ++ DA G+ +M
Sbjct: 157 MISGMCRAGDLDGAETLH--RRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG 214
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+KP+ V +T++++ + D EL E+ G+ PD TYN +NGLC+ ++++
Sbjct: 215 RGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 274
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ M G +PD +TY TL+ CK EL+ E+ + M +G+ L+ TY+ +I
Sbjct: 275 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 334
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL+ G +A +L E + GL ++ + I C++G V+ L LLK+M +K P
Sbjct: 335 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 394
Query: 415 GARVWEALL 423
G + ++
Sbjct: 395 GVVTYNVIM 403
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 166/381 (43%), Gaps = 22/381 (5%)
Query: 42 VKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEA--YHFVIKTLAENSQFCDI 99
+++ + PT + + P + + + PPEA ++ +++ L +
Sbjct: 76 LRRGIRLEPTSCTGLMSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASA 135
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF-------------- 145
+V D ++ R T F +I A + L ++ +
Sbjct: 136 QNVFDEMQSRGVRRT-VVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 194
Query: 146 ---RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
R+ R+ A + M G + ++++ + C++ D ++ +L +EM++ G
Sbjct: 195 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD--AETMLELHREMRERGV 252
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V Y ++ L + + A GI+ +M+S G++PD V YT +++G +E+ A E
Sbjct: 253 RPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAME 312
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ ++ G+ D TY I+GL K +++ M E G +PD TY ++ A C
Sbjct: 313 IKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFC 372
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ ++ L+KEM+ KG + TY+++++G G + A LL +N G+
Sbjct: 373 RKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDI 432
Query: 383 MFDETICGLCQRGLVRKALEL 403
++ + G C+ G V EL
Sbjct: 433 TYNILLDGHCKHGKVTDIEEL 453
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 112/218 (51%), Gaps = 1/218 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++R LV+ ++ A + ++M+S G++ +V + +++G+ D AE L + G
Sbjct: 122 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAG 181
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PDVYTY I GLC+ +E + M G KP+ + + L+ A CK + +
Sbjct: 182 VTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETML 241
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL +EM+ +G+ + TY+ +++GL D+ A G++ E + GL + + I G
Sbjct: 242 ELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGY 301
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
C+ + A+E+ + M + V + A L+S +SK
Sbjct: 302 CKEEELDMAMEIKQNMVAEGVGLDEVTYTA-LISGLSK 338
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 95/193 (49%)
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
Q+ G+ P+ + +++ ++ + A+ +FDE+ G+ V ++N I+G+C+
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+++ + M E G PDV TY L+Q LC+V + R + ++M +G+ N ++
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+ID KGD L E +G+ + ++ + GLC+ ++ A ++ +M
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285
Query: 411 DVSPGARVWEALL 423
+ P + L+
Sbjct: 286 GLRPDTVTYTTLI 298
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 179/415 (43%), Gaps = 48/415 (11%)
Query: 44 QSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEP-------------PPE----AYHFV 86
+L+ PP + P SLL FS Y P PP Y+ +
Sbjct: 81 HALSPPPLRPFFDRP-----FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNAL 135
Query: 87 IKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFR 146
I+ L + L + R + F F LI Y + + + +LF K+P FR
Sbjct: 136 IRALCRRADLRHAQRYLS-LMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMP-FR 193
Query: 147 INRVGFAIEILN-CMINDGFCVDGK-----------------TCSLILSSVCEQRDLSSD 188
GF+ + ++ + +GFC G+ T + ++ +C+ +
Sbjct: 194 ----GFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAG--RGE 247
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E L +Q+MK+LG+ Y ++ +++K +A ILN+M G+ P +V T+V+
Sbjct: 248 EGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVV 307
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
N + A +F+ + G P+V+TYN + G C V + ++ M E G +
Sbjct: 308 NAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVE 367
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV+TYN L++ C + L++ M+ G+ + TY+++ID L G + EAC L
Sbjct: 368 PDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +G+ S F+ I GLC+ G A L+ M +P + +
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 2/262 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ +L+ M G D T +L++ C + S ++ M+ G Y +
Sbjct: 354 AMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGS--AFRLLRLMEGNGLAADQYTYNVL 411
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +L K KV +A + + ++ GI+P+ V + V+NG+ + A + ++ G
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGY 471
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD YTY+ +I LCK + G+ I M + KP + Y ++ L R
Sbjct: 472 APDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATR 531
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M +G ++ TY+ + ++G + EA ++ E + ++ I G
Sbjct: 532 IWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHT 591
Query: 393 QRGLVRKALELLKQMADKDVSP 414
G +A+ +LK M P
Sbjct: 592 SIGQTDRAVTILKHMTGVASMP 613
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 140/357 (39%), Gaps = 37/357 (10%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y+ +I L + + + S+ D +E R ++ F +N K
Sbjct: 408 YNVLIDALCKTGKVDEACSLFDGLEYR--------------GIRPNSVTFNTVINGLCKA 453
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
KF + A L MI+ G+ D T S + ++C+ + S E L F+ EM +
Sbjct: 454 GKFDV-----ACTFLENMISAGYAPDTYTYSPFIENLCKTK--GSQEGLFFIDEMLQKDV 506
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V+YT VI L + A I QM S G PD+V YT + + +AE
Sbjct: 507 KPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAEN 566
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY-------- 314
+ E+ + D YN I+G + + ++ M + S P+ T+
Sbjct: 567 VVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLL 626
Query: 315 ------NTLLQA--LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+ L+A + K EL + EL + MK + + +TY +++G + + + E
Sbjct: 627 QRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVT 686
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+ + L +++ + C+ + A LL M P ++ LL
Sbjct: 687 SLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLL 743
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 2/168 (1%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
E+ M + +T IL E+R L DE+ V MK+ Y ++
Sbjct: 651 FELFELMKKNSVPSSARTYLSILEGFSEERRL--DEVTSLVSLMKEENLPLNEDIYNALV 708
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
K DA +L M G P+++ Y +L+G+ + +A+E+F
Sbjct: 709 NCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYN 768
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
D + V I+G ++ + + MI+ +E++ KP TY L + L
Sbjct: 769 TDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 109/283 (38%), Gaps = 23/283 (8%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F G A I M++ G D T + + + C + L DE V EMKK
Sbjct: 521 FNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRL--DEAENVVTEMKKCRTIV 578
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV--------------LNG 250
+ Y +I + A+ IL M P+ + ++ L
Sbjct: 579 DAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKA 638
Query: 251 VIVQEDYVKAE--ELFDELLVLGLVPD-VYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
V + A+ ELF EL+ VP TY + G ++ ++ +++ M+E
Sbjct: 639 TSVWKTIELADVFELF-ELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENL 697
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ YN L+ CK+R + L+ M G + NL Y ++ GL ++G A
Sbjct: 698 PLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKE 757
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRG---LVRKALELLKQM 407
+ + K T ++ I G ++G + + +L+QM
Sbjct: 758 IFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQM 800
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 4/292 (1%)
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
L + + KFR G A+E+ + MIN G D + ++ S+CE +DLS + + + +M
Sbjct: 198 LLHGLVKFR--HFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM--IVQM 253
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
+ G +V Y +I L KK+KV++A+GI + +KPD+V Y ++ G+ +++
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEF 313
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
E+ DE+L L P + + GL K+ VE + ++ + E G P++ YN L
Sbjct: 314 EVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNAL 373
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ +LCK R + L M G+ N TYSI+ID +G + A L E ++ GL
Sbjct: 374 IDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGL 433
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++ I G C+ G + A L+ +M +K + P + +L+ SK
Sbjct: 434 KPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSK 485
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 124/233 (53%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L + EM +L F ++++ L K+ KV +AL ++ ++ G+ P+I Y +++
Sbjct: 317 LEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDS 376
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ ++ +AE LFD + +GL P+ TY++ I+ C++ ++ + + M ++G KP
Sbjct: 377 LCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPS 436
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V YN+L+ CK +++ L+ EM K + + TY+ ++ G SKG I +A L
Sbjct: 437 VYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E KG+ F + GL + GL+R A++L +MA+ +V P + ++
Sbjct: 497 EMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMI 549
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 115/236 (48%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E L V+ + + G + Y +I SL K +A + ++M G+ P+ V Y+++
Sbjct: 349 EEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSIL 408
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ + A E++ +GL P VY YN ING CK ++ A ++A M
Sbjct: 409 IDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKL 468
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P V+TY +L+ C ++N+ L EM KGIV ++ T++ ++ GL G I +A
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E + ++ I G C+ G + KA E L +M +K + P + L+
Sbjct: 529 LFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLI 584
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 20/292 (6%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVD 168
R F E L++ + ++++NL ++ +F ++ I + N +I+
Sbjct: 325 RLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSP---NIFVYNALID------ 375
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
S+C+ R+ ELL M K+G C V Y+ +I ++ K+ AL
Sbjct: 376 ---------SLCKGRNFDEAELL--FDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L +M G+KP + Y ++NG D AE L E++ L P V TY + G C
Sbjct: 425 LGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ + +++ M G P + T+ TLL L + + +L EM + N T
Sbjct: 485 KGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVT 544
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
Y++MI+G +G++ +A L E + KG+ + + I GLC G +A
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 152/360 (42%), Gaps = 56/360 (15%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGF---------------AIEILNC 159
+ F L+ A +D+V LF ++ ++ + NRV + A E LN
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNE 567
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI G D + ++ +C S ++ FV + K + YT ++ ++
Sbjct: 568 MIEKGIVPDTYSYRPLIHGLCLTGQASEAKV--FVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE------------------------ 255
K+ +AL + M G+ D+VCY ++++G + +
Sbjct: 626 GKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIY 685
Query: 256 -----------DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
D+ +A ++D ++ G VP+ TY INGLCK V + + M
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRP 745
Query: 305 LGSKPDVITYNTLLQALCK-VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
S P+ +TY L L K V ++ + EL + KG++ N TY+++I G +G +
Sbjct: 746 GNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRME 804
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EA L+ + G+ + I LC+R V+KA+EL M +K + P + L+
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 114/222 (51%), Gaps = 1/222 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I+ V+ +V D + + M + + P++ + +L+G++ + A ELFD+++ +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINV 221
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ PDVY Y I LC+ ++ +MI ME G +++ YN L+ LCK +++
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ K++ K + ++ TY ++ GL + +++E L + + G
Sbjct: 282 VGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG 341
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
L +RG V +AL L+K++A+ VSP V+ AL+ S +F
Sbjct: 342 LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNF 383
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 120/273 (43%), Gaps = 39/273 (14%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +L F M K+ + + ++ LVK A+ + + M + GI+PD+ YT V
Sbjct: 174 DGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGV 233
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV--EAGIKMIACMEEL 305
+ + +D +A+E+ ++ G ++ YNV I+GLCK+ V GIK +EL
Sbjct: 234 IRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKEL 293
Query: 306 GSKPDVITYNTLLQALCKVRELN----------RLR------------------------ 331
KPDV+TY TL+ LCKV+E RLR
Sbjct: 294 --KPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEA 351
Query: 332 -ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
LVK + G+ N+ Y+ +ID L + EA L + GLC + I
Sbjct: 352 LNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDM 411
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+RG + AL L +M D + P + +L+
Sbjct: 412 FCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLI 444
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 125/303 (41%), Gaps = 47/303 (15%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
NC +N+ C G +L C + L +E L Q+M G +V Y +I +
Sbjct: 607 NCELNE-ICYTG-----LLHGFCREGKL--EEALSVCQDMGLRGVDLDLVCYGVLIDGSL 658
Query: 218 KKE--KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K + KVF LG+L +M G+KPD V YT +++ D+ +A ++D ++ G VP+
Sbjct: 659 KHKDRKVF--LGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY--------------------- 314
TY INGLCK V + + M S P+ +TY
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELH 776
Query: 315 --------------NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
N L++ C+ + EL+ M G+ + TY+ MI L +
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRN 836
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
D+ +A L KG+ ++ I G C G + KA EL +M + + P E
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSE 896
Query: 421 ALL 423
+
Sbjct: 897 TTI 899
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 158/352 (44%), Gaps = 11/352 (3%)
Query: 100 SSVLDHIEKRENFETPEFIF--IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL 157
++++D + K NF+ E +F + I + + +++F R ++ A+ L
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFC-----RRGKLDTALSFL 425
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
MI+ G + +++ C+ D+S+ E L + EM +V YT+++
Sbjct: 426 GEMIDMGLKPSVYPYNSLINGHCKFGDISAAESL--MAEMINKKLEPTVVTYTSLMGGYC 483
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K K+ AL + ++M GI P I +T +L+G+ A +LF E+ + P+
Sbjct: 484 SKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRV 543
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYNV I G C++ N+ + + M E G PD +Y L+ LC + + + V +
Sbjct: 544 TYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
LN Y+ ++ G +G + EA + ++ +G+ + I G +
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+ L LLK+M D+ + P ++ +++ + DF + D ++N C
Sbjct: 664 KVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA--FGIWDLMINEGC 713
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 3/242 (1%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKI-PKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+F+ L+K D D V I K + A I + MIN+G + T + ++
Sbjct: 665 VFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C+ ++ E+L +M+ V Y + L K L+ G
Sbjct: 725 NGLCKAGFVNEAEIL--CSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKG 782
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ + Y M++ G Q +A EL ++ G+ PD TY I+ LC++N+V+ I
Sbjct: 783 LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAI 842
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M E G +PD + YNTL+ C E+ + EL EM +G+ N +T I
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISND 902
Query: 357 AS 358
+S
Sbjct: 903 SS 904
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 149/298 (50%), Gaps = 7/298 (2%)
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ D + F VN K V AIEI++ M+ +G+ D T + ++S +C+ ++
Sbjct: 292 FPDQYTFNTLVNGLCKA-----GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
E + F+ +M V Y +I +L K+ +V +A + + S GI PD+ +
Sbjct: 347 K--EAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G+ + ++ A ELF+E+ G PD +TYN+ I+ LC + ++ + M+ ME
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G VITYNTL+ CK ++ E+ EM+ G+ N TY+ +IDGL + +A
Sbjct: 465 GCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+++ + +G ++ + C+ G ++KA ++++ M P + L+
Sbjct: 525 SQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 161/353 (45%), Gaps = 22/353 (6%)
Query: 72 SIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHR 131
S++ +P ++ +IK L Q +L+ + E F +++ Y +
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSY-GLVPDEKTFTTIMQGYIEEGD 239
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
++ + ++ +F + ++ + I GFC +G+ ++ L
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNV----IVHGFCKEGRV----------------EDAL 279
Query: 192 GFVQEMKKL-GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
F+QEM GF + ++ L K V A+ I++ M +G PD+ Y V++G
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + +A E D+++ P+ TYN I+ LCK+N VE ++ + G PD
Sbjct: 340 LCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V T+N+L+Q LC R EL +EM+ KG + TY+++ID L SKG + EA +L+
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++ I G C+ +R+A E+ +M VS + + L+
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLI 512
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N+V A E+ + + G D T + ++ +C R+ + +EM+ G
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN--HRVAMELFEEMRSKGCEPDEF 436
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I SL K K+ +AL +L QM+ G ++ Y +++G +AEE+FDE+
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM 496
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
V G+ + TYN I+GLCK VE +++ M G KPD TYN+LL C+ ++
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDI 556
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++V+ M G ++ TY +I GL G + A LL KG+ ++
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPV 616
Query: 388 ICGLCQRGLVRKALELLKQMADK-DVSPGA 416
I GL ++ +A+ L ++M ++ + +P A
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAAPDA 646
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 166/379 (43%), Gaps = 26/379 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
N P P Y ++ L + F D+ +L+ + K E F+ LI++YA QD
Sbjct: 78 NFSPEPALYEEILLRLGRSGSFDDMRKILEDM-KNSGCEMGTSPFLILIESYAQ-FELQD 135
Query: 135 SV--NLFYKIPKFRIN-RVGFAIEILNCMIND----------------GFCVDGKTCSLI 175
+ + + I F + F +LN +++ G D T +++
Sbjct: 136 EILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVL 195
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ ++C L L+ +++M G +T +++ +++ + AL I QM
Sbjct: 196 IKALCRAHQLRPAILM--LEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEF 253
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL-GLVPDVYTYNVYINGLCKQNNVEA 294
G V ++++G + A E+ G PD YT+N +NGLCK +V+
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
I+++ M + G PDV TYN+++ LCK+ E+ E + +M + N TY+ +I
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIS 373
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + + EA L +KG+ F+ I GLC R A+EL ++M K P
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 415 GARVWEALL--LSSVSKLD 431
+ L+ L S KLD
Sbjct: 434 DEFTYNMLIDSLCSKGKLD 452
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 61/283 (21%)
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
E EF + LI + + +++N+ + + ++ ++ N +I DGFC K
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNM---LKQMELSGCARSVITYNTLI-DGFCKANKI- 486
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++E+ EM+ G V Y +I L K +V DA +++QM
Sbjct: 487 ------------REAEEIF---DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+G KPD Y +L D KA ++ + G PD+ TY I+GLCK V
Sbjct: 532 IMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 293 EAGIKMIACMEELG------------------------------------SKPDVITYNT 316
E K++ ++ G + PD ++Y
Sbjct: 592 EVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRI 651
Query: 317 LLQALCKVRELNRLRELVK---EMKWKGIVLNLQTYSIMIDGL 356
+ + LC +RE V E+ KG V + ++ +GL
Sbjct: 652 VFRGLCNGG--GPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A +I+ M ++G D T ++S +C+ R + +LL +Q MK G Y
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ-MK--GIALTPHAYNP 615
Query: 212 VIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLV 269
VI+ L +K K +A+ + +M + + PD V Y +V G+ ++ A + ELL
Sbjct: 616 VIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
G VP+ + + GL + E +K++
Sbjct: 676 KGFVPEFSSLYMLAEGLLTLSMEETLVKLV 705
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 155/303 (51%), Gaps = 9/303 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI R+ ++ G+ VD + +L +C+ + + + + +++M ++G G
Sbjct: 96 RIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVG-EAMHVLLRQMPEVGCRLG 154
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQM---KSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+V Y +++ L + + +A +L+ M + PD+V Y +V+NG + KA
Sbjct: 155 VVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYS 214
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
LF L +G+ PDV TYN I+GLCK V+ + M E G KP+ +TYNT++ LC
Sbjct: 215 LF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLC 271
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K +E++ + ++M KG+ + TY+ +IDGL + A G+ ++ +++G+
Sbjct: 272 KAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHV 331
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
++ I GLC+ + KA + +QM DK V P + ++ L +D F ++
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQM 391
Query: 441 VDQ 443
+D+
Sbjct: 392 IDK 394
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 4/297 (1%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A + M++ G T + I+ +C+ + + E G Q+M G V Y
Sbjct: 276 VDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE--GVFQQMIDRGVKPDHVTY 333
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L K + + A G+ QM G+KPD + YT++++G+ + +AE +F +++
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ P+ TYN I+G E ++ I M +PDV TY LL LCK + N
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
R L M KGI ++ Y IM+ G KG + E LL + G+ +F+ IC
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+R ++ + + + +M + +SP + L+ ++ KL V+ + ++ +Q++N
Sbjct: 514 AYAKRAMIDEVMHIFIKMKQQGLSPNVVTY-GTLIDALCKLGRVDDAVLQF-NQMIN 568
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 121/225 (53%)
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
++G +V Y +I L K ++V A + QM G+KP+ V Y +++G+ ++
Sbjct: 218 EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVD 277
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
AE +F +++ G+ P TYN I+GLCK V+ + M + G KPD +TYNT++
Sbjct: 278 MAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTII 337
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCK + +++ + ++M KG+ + TY+I+IDGL + A G+ ++ ++KG+
Sbjct: 338 DGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVK 397
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I G G + ++ +K+M+ D+ P + LL
Sbjct: 398 PNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLL 442
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 132/253 (52%), Gaps = 2/253 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++LN M+ +G + + + ++ + ++ + DE++ +MK+ G +V Y +I
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMI--DEVMHIFIKMKQQGLSPNVVTYGTLID 548
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L K +V DA+ NQM ++G+ P+ V + ++ G+ + + K EELF E+L G+ P
Sbjct: 549 ALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D+ +N + LCK+ V ++I M +G KPDVI+YNTL+ C ++ +L+
Sbjct: 609 DIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLL 668
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M G+ N+ +Y+ ++ G G I A L E L KG+ ++ + GL +
Sbjct: 669 DGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRS 728
Query: 395 GLVRKALELLKQM 407
G +A EL M
Sbjct: 729 GRFSEARELYVNM 741
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 2/260 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G D T + I+ +C+ +++ E Q+M + G V Y +I L K ++V
Sbjct: 220 GVSPDVVTYNTIIDGLCKAQEVDRAE--DVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVD 277
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A G+ +M G+KP V Y +++G+ + +AE +F +++ G+ PD TYN I
Sbjct: 278 MAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTII 337
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+GLCK ++ + M + G KPD +TY ++ LCK + ++R + ++M KG+
Sbjct: 338 DGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVK 397
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N TY+ +I G S G E ++E L + + LC+ G +A L
Sbjct: 398 PNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSL 457
Query: 404 LKQMADKDVSPGARVWEALL 423
M K + P ++ +L
Sbjct: 458 FDSMIRKGIKPSVTIYGIML 477
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 4/286 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI+ G D T + I+ +C+ + + E G Q+M G + YT +I L K
Sbjct: 321 MIDRGVKPDHVTYNTIIDGLCKAQAIDKAE--GVFQQMIDKGVKPDNLTYTIIIDGLCKA 378
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ V A G+ QM G+KP+ Y +++G + + + + E+ L PDV+TY
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTY 438
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ++ LCK + M G KP V Y +L K L+ + +L+ M
Sbjct: 439 GLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVA 498
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
GI N + ++ +I A + I E + + +GL + I LC+ G V
Sbjct: 499 NGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDD 558
Query: 400 ALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
A+ QM ++ V+P V+ +L+ L +V K + V F+ +++Q
Sbjct: 559 AVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQ 604
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 2/275 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A+ N MIN+G + + ++ +C E L EM G
Sbjct: 552 KLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFL--EMLNQGIRPD 609
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + V+ +L K+ +V +A +++ M G+KPD++ Y +++G +A +L D
Sbjct: 610 IVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLD 669
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ GL P++ +YN ++G CK ++ + M G P V TYNT+L L +
Sbjct: 670 GMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSG 729
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ REL M + ++ TYSI++DG EA + + + L F+
Sbjct: 730 RFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFN 789
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
I GL + G A++L + + P +
Sbjct: 790 IMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYR 824
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 106/215 (49%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ VI + K+ + + + I +MK G+ P++V Y +++ + A F++++
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMI 567
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P+ +N + GLC + E ++ M G +PD++ +NT+L LCK +
Sbjct: 568 NEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVM 627
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R L+ M G+ ++ +Y+ +IDG + EA LL+ ++ GL ++ +
Sbjct: 628 EARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLL 687
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ G + A L ++M K V+PG + +L
Sbjct: 688 HGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 111/236 (47%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E++ ++EM + Y ++ L K K +A + + M GIKP + Y ++
Sbjct: 417 EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G + + +L + ++ G+ P+ +N I K+ ++ + + M++ G
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGL 536
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P+V+TY TL+ ALCK+ ++ +M +G+ N ++ ++ GL + +
Sbjct: 537 SPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEE 596
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E LN+G+ F+ +C LC+ G V +A L+ M + P + L+
Sbjct: 597 LFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLI 652
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + + M G +V Y ++ K ++ +A + +M G+ P + Y +
Sbjct: 662 DEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTI 721
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG+ + +A EL+ ++ + + TY++ ++G CK N + K+ + +
Sbjct: 722 LNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDL 781
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ D+IT+N ++ L K +L + G+V ++ TY ++ + L +G + E
Sbjct: 782 QLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDC 841
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L G S M + I L RG + +A L ++ +K+ S A ++L+S
Sbjct: 842 LFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEAST-TSMLISLF 900
Query: 428 SKLDF 432
S+ ++
Sbjct: 901 SREEY 905
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 38/210 (18%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR-L 330
+ PD TY++ I C+ +E G + + G + D I N LL+ LC + + +
Sbjct: 80 VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA--------------C---------- 366
L+++M G L + +Y+ ++ GL + EA C
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199
Query: 367 --GLLEEA---------LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G E L G+ ++ I GLC+ V +A ++ +QM +K V P
Sbjct: 200 INGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPN 259
Query: 416 ARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ ++ L ++D F ++VD+
Sbjct: 260 NVTYNTIIDGLCKAQEVDMAEGVFQKMVDK 289
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 162/324 (50%), Gaps = 5/324 (1%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC 159
++++D K+ E + +F ++ K A+ + +V L + + K I + GF E+
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTV-LIHGLFKNGIKKQGF--EMYEK 258
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G + T + +++ +C +D + + EM++ G +V Y +I L ++
Sbjct: 259 MQEHGVFPNLHTYNCVMNQLC--KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K +A +++QMKSDGI P+++ Y +++G KA L +L GL P + TY
Sbjct: 317 MKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ ++G CK+ + K++ MEE G KP +TY L+ + + + +L M+
Sbjct: 377 NILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEE 436
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ ++ TYS++I G KG + EA L + + K +++ + G C+ G +
Sbjct: 437 LGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYR 496
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL L ++M +K++ P + ++
Sbjct: 497 ALRLFREMEEKELPPNVASYRYMI 520
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 170/356 (47%), Gaps = 23/356 (6%)
Query: 94 SQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV---------------NL 138
SQF SS+L ++ + E +T ++ +I Y + S+ N
Sbjct: 72 SQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNC 131
Query: 139 FYKIPKFRINRVGFAIEILNCMINDG---FCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
F + F + F C N+ +D + +++ CE ++ ++ +
Sbjct: 132 FNNLLTFVVGSSSF--NQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEI--EKSFDLLV 187
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
E+++ GF +V YT +I KK ++ A + +M G+ + YT++++G+
Sbjct: 188 ELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNG 247
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ E+++++ G+ P+++TYN +N LCK + K+ M E G +++TYN
Sbjct: 248 IKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ LC+ + N E++ +MK GI NL TY+ +IDG + +A L + ++
Sbjct: 308 TLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSR 367
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
GL ++ + G C++G A +++K+M ++ + P ++V +L+ + ++ D
Sbjct: 368 GLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP-SKVTYTILIDTFARSD 422
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M++ G + Y V+ L K + DA + ++M+ G+ +IV Y ++ G+ +
Sbjct: 257 EKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A E+ D++ G+ P++ TYN I+G C + + + ++ G P ++TY
Sbjct: 317 MKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N L+ CK + + ++VKEM+ +GI + TY+I+ID A ++ +A L
Sbjct: 377 NILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEE 436
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GL + I G C +G + +A L K M +K P ++ ++L
Sbjct: 437 LGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLG 487
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 132/272 (48%), Gaps = 12/272 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+++ M +DG + T + ++ C R L + L +++K G +V Y +
Sbjct: 322 ANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLG--KALSLCRDLKSRGLSPSLVTYNIL 379
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ KK A ++ +M+ GIKP V YT++++ ++ KA +L + LGL
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGL 439
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV+TY+V I+G C + + ++ M E +P+ + YNT++ CK R
Sbjct: 440 TPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALR 499
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +EM+ K + N+ +Y MI+ L + EA GL+E+ ++ G+ S+ +
Sbjct: 500 LFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILN------- 552
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLL 424
L+ +A + + P + V++ L++
Sbjct: 553 ---LISRAKNDSHSRSMDEEEPASMVFDGLMV 581
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 135/251 (53%), Gaps = 9/251 (3%)
Query: 191 LGFVQEMKKLGFCFGMVD----YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ +++EM+ CFG+V YT VI + + DAL + ++M G PD+V Y
Sbjct: 1 MAYLREMR----CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 56
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+LNG+ + + AE L +E+ G+ PD+ T+ I+G C + ++ +++ M
Sbjct: 57 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 116
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+PD++TYNTL+ +C+ +L++ +L +M + I N TYSI+ID KG + +A
Sbjct: 117 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 176
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
G L+E +NKG+ ++ I G C+ G V K + L++M VSP + L+
Sbjct: 177 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236
Query: 427 VSKLDFVNTSF 437
+ K D ++ +F
Sbjct: 237 I-KEDKMHDAF 246
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 129/260 (49%), Gaps = 2/260 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G DG ++++ C + L SD L EM G +V Y ++ L K+ ++
Sbjct: 11 GLVPDGVIYTMVIGGFC-RAGLMSDALR-VRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 68
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA G+LN+M+ G+ PD+ +T +++G ++ KA +LFD +L L PD+ TYN I
Sbjct: 69 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 128
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G+C+Q +++ + M P+ +TY+ L+ + C+ ++ + EM KGI+
Sbjct: 129 DGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 188
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ TY+ +I G G++ + L++ + + ++ I G + + A +L
Sbjct: 189 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 248
Query: 404 LKQMADKDVSPGARVWEALL 423
L M + V P + L+
Sbjct: 249 LNMMEKEKVQPDVVTYNMLI 268
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 37/297 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + + M+ G D T + +L+ +C++R L E G + EM++ G + +T +
Sbjct: 35 ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE--GLLNEMRERGVPPDLCTFTTL 92
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD------- 265
I + K+ AL + + M + ++PDIV Y +++G+ Q D KA +L+D
Sbjct: 93 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI 152
Query: 266 ----------------------------ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
E++ G++P++ TYN I G C+ NV G K
Sbjct: 153 FPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK 212
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M PD+ITYNTL+ K +++ +L+ M+ + + ++ TY+++I+G +
Sbjct: 213 FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFS 272
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G++ EA + E+ KG+ + I G G ++A +L +M + +P
Sbjct: 273 VHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 329
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 137/304 (45%), Gaps = 23/304 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQ 133
C P Y+ ++ L + + D +L+ E RE P+ F LI Y +
Sbjct: 46 GCLPDVVTYNTLLNGLCKERRLLDAEGLLN--EMRERGVPPDLCTFTTLIHGYCIEGKLD 103
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++ LF + M+N D T + ++ +C Q DL D+
Sbjct: 104 KALQLF------------------DTMLNQRLRPDIVTYNTLIDGMCRQGDL--DKANDL 143
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+M V Y+ +I S +K +V DA G L++M + GI P+I+ Y ++ G
Sbjct: 144 WDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCR 203
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ K ++ +++V + PD+ TYN I+G K++ + K++ ME+ +PDV+T
Sbjct: 204 SGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVT 263
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN L+ + + ++M KGI + TY MI+G + G+ EA L +E L
Sbjct: 264 YNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 323
Query: 374 NKGL 377
+G
Sbjct: 324 QRGF 327
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A L+ MIN G + T + I+ C ++S + F+Q+M ++ Y +
Sbjct: 175 AFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ--KFLQKMMVNKVSPDLITYNTL 232
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +K++K+ DA +LN M+ + ++PD+V Y M++NG V + +A +F+++ G+
Sbjct: 233 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGI 292
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
PD YTY ING N + ++ M + G PD
Sbjct: 293 EPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 180/380 (47%), Gaps = 32/380 (8%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
+S LH F C+P A+ ++ L + + ++LD + + + + + + ++
Sbjct: 162 VSEALHFFHQI-CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVE-DGLQPNQITYGTIV 219
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
++NL K+ + ++R+ + I + +I DG DG+ Q
Sbjct: 220 DGMCKMGDTVSALNLLRKMEE--VSRIKPNVVIYSAII-DGLWKDGR-----------QT 265
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D + EM++ G + Y +I + +A +L +M + PD+V
Sbjct: 266 DAQN-----LFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVT 320
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+++++N ++ + + +AEEL++E+L G++P+ TYN I+G KQN ++A +M M
Sbjct: 321 FSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMA 380
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G PDVIT++ L+ C + ++ +L+ EM +G+V N TY+ +I G G++
Sbjct: 381 TKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLN 440
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK-----------DV 412
A LL+E ++ G+C + + GLC G ++ ALE+ K M DV
Sbjct: 441 AALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDV 500
Query: 413 SPGARVWEALLLSSVSKLDF 432
P + + L+ +++ F
Sbjct: 501 EPDVQTYNILICGLINEGKF 520
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 145/303 (47%), Gaps = 32/303 (10%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
+P+ I F LI Y A R D + L +++ + G + T
Sbjct: 385 SPDVITFSILIDGYCGAKRVDDGMKLLHEMSR------------------RGLVANTITY 426
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ ++ C+ +L++ L +QEM G C +V ++ L K+ DAL + M
Sbjct: 427 TTLIHGFCQLGNLNA--ALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Query: 233 KS-----------DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ + ++PD+ Y +++ G+I + + +AEEL++E+ GLVPD TYN
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNS 544
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+GLCKQ+ ++ +M M G PDV+T+ TL+ CKV + E+ EM +G
Sbjct: 545 VIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRG 604
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
IV N TY +I G G+I A + +E ++ G+ + + GL + +++A+
Sbjct: 605 IVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 664
Query: 402 ELL 404
+ L
Sbjct: 665 QCL 667
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 13/293 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A + M G D T S+++ C + + D+ + + EM + G +
Sbjct: 367 NRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRV--DDGMKLLHEMSRRGLVANTI 424
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I + + AL +L +M S G+ P++V +L+G+ A E+F +
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ PDV TYN+ I GL + ++ M G PD ITYN+
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNS 544
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M KG ++ T++ +I+G G + + + E +G
Sbjct: 545 VIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRG 604
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + + I G CQ G + AL++ ++M V P +L SK
Sbjct: 605 IVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSK 657
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 132/282 (46%), Gaps = 13/282 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ N M+ G + T + ++ +Q L + E + ++ K G ++ ++ +
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATK--GCSPDVITFSIL 394
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I ++V D + +L++M G+ + + YT +++G + A +L E++ G+
Sbjct: 395 IDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGV 454
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL-----------GSKPDVITYNTLLQAL 321
P+V T N ++GLC ++ ++M M++ +PDV TYN L+ L
Sbjct: 455 CPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL 514
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
+ + EL +EM +G+V + TY+ +IDGL + + EA + + +KG
Sbjct: 515 INEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDV 574
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F I G C+ G V LE+ +M + + A + L+
Sbjct: 575 VTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLI 616
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA+ + M P ++ + +L V+ E L ++ + + ++Y++ + I
Sbjct: 59 DAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILI 118
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC---KVRE-LNRLRELVKEMKW 339
C + + + + +LG P ++T++TLL LC +V E L+ ++ K
Sbjct: 119 KCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKP--- 175
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
N+ ++ +++GL +G ++EA LL+ + GL + + G+C+ G
Sbjct: 176 -----NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 230
Query: 400 ALELLKQMAD-KDVSPGARVWEALL 423
AL LL++M + + P ++ A++
Sbjct: 231 ALNLLRKMEEVSRIKPNVVIYSAII 255
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 156/313 (49%), Gaps = 20/313 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F + LI + + +D+++LF K+ I + IL DGFC DG
Sbjct: 369 FTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILV----DGFCKDG------- 417
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
++ E +++ + M K +V Y++++ +V A I N M G
Sbjct: 418 -NIKEAKNV--------LAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ ++ Y +++NG + +A +LF E+ + PDV TY+ I+GLCK + +
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYAL 528
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G +PD+ITYN++L ALCK +++ L+ ++K +GI ++ TY+I++ GL
Sbjct: 529 ELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGL 588
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G + +A + E+ L KG + I G C +GL +AL LL +M + P A
Sbjct: 589 CQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDA 648
Query: 417 RVWEALLLSSVSK 429
+ +E ++LS K
Sbjct: 649 KTYEIIILSLFEK 661
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 118/218 (54%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I + K + V DA + ++ S I PD+ Y +++G + A +LF+
Sbjct: 333 VVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFN 392
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ ++PDVYT+++ ++G CK N++ ++A M + KPDV+TY++L+ C V
Sbjct: 393 KMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVN 452
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+N+ + M +G+ N+Q+Y+IMI+G + EA L +E +K + +
Sbjct: 453 EVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYS 512
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G + ALEL+ +M + P + ++L
Sbjct: 513 SLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSIL 550
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+N V A I N M + G + ++ +++++ C+ + + DE + +EM +
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMV--DEAMKLFKEMHHKQIFPDV 508
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y+++I L K ++ AL ++++M G +PDI+ Y +L+ + + KA L +
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L G+ PD+ TY + + GLC+ +E K+ + G DV Y ++Q C
Sbjct: 569 LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ L+ +M+ G + + +TY I+I L K + A LL E + +GL
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 106/201 (52%), Gaps = 2/201 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I V A+++ M + D T S ++ +C+ +S L V EM G
Sbjct: 485 KIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYA--LELVDEMHYRGQQPD 542
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +++ +L KK V A+ +L ++K GI+PD+ YT+++ G+ A ++F+
Sbjct: 543 IITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFE 602
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+LLV G DVY Y V I G C + + + +++ MEE G PD TY ++ +L +
Sbjct: 603 DLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKD 662
Query: 326 ELNRLRELVKEMKWKGIVLNL 346
E + +L++EM +G+++ L
Sbjct: 663 ENDMAEKLLREMIMRGLLVAL 683
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G PD T +I G C + + + + +G D ++Y TL+ LCKV E
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL++ K + ++ Y+ +IDG+ + +A L E ++K + ++ I G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G ++ A++L +M K++ P + L+
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILV 410
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 152/298 (51%), Gaps = 7/298 (2%)
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ D + F VN K V A+E+++ M+ +GF D T + ++S +C+ ++
Sbjct: 298 FPDKYTFNMLVNGLSKT-----GHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEV 352
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
DE + + +M + V Y +I +L K+ +V +A + + GI PD+ Y
Sbjct: 353 --DEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYN 410
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G+ + ++ A EL+ E+ G PD +TYN+ I+ LC + ++ + ++ ME
Sbjct: 411 SLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVS 470
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G +VITYNTL+ CK + + E+ +M+ +G+ N TY+ +IDGL + EA
Sbjct: 471 GCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEA 530
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+++ + +GL ++ + C+ G ++KA ++++ MA P + L+
Sbjct: 531 SQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLI 588
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 147/294 (50%), Gaps = 5/294 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M G D T ++++ S+C + L E L ++EM+ G ++ Y +
Sbjct: 425 AMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQ--EALNLLKEMEVSGCARNVITYNTL 482
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K +++ +A I +QM+ G+ + V Y +++G+ E +A +L D++++ GL
Sbjct: 483 IDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGL 542
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD +TYN + CK +++ ++ M G +PD++TY TL+ LCK + +
Sbjct: 543 RPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATK 602
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L++ ++ KGI L Y+ +I L + EA L E + K + + GLC
Sbjct: 603 LLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLC 662
Query: 393 Q-RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
Q G + +A++ + +M ++ P + +L + L V T I+L+D ++
Sbjct: 663 QGGGPIGEAVDFVMEMLERGYVPEFSSF-YMLAEGLFSLAMVGT-LIKLIDMVM 714
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 127/261 (48%), Gaps = 17/261 (6%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLGFCFGMVDYTNVIRSLVKKEKV 222
GFC +G+ +E L F++EM + GF + ++ L K V
Sbjct: 274 GFCKEGRI----------------EEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHV 317
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
AL +++ M +G PDI Y +++G+ + +A ++ ++++ P+ TYN
Sbjct: 318 KHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTI 377
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+ LCK+N VE K+ + G PDV TYN+L+Q LC R EL KEMK KG
Sbjct: 378 ISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGC 437
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ TY+++ID L +G + EA LL+E G ++ I G C+ + +A E
Sbjct: 438 HPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEE 497
Query: 403 LLKQMADKDVSPGARVWEALL 423
+ QM + VS + + L+
Sbjct: 498 IFDQMELQGVSRNSVTYNTLI 518
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 136/273 (49%), Gaps = 2/273 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N+V A ++ + G D T + ++ +C R+ + + +EMK G
Sbjct: 385 NQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTV--AMELYKEMKTKGCHPDEF 442
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I SL + K+ +AL +L +M+ G +++ Y +++G + +AEE+FD++
Sbjct: 443 TYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM 502
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G+ + TYN I+GLCK VE +++ M G +PD TYN+LL CK ++
Sbjct: 503 ELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDI 562
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++V+ M G ++ TY +I GL G + A LL KG+ ++
Sbjct: 563 KKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPV 622
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
I L +R ++A+ L ++M +K +P A ++
Sbjct: 623 IQALFRRKRSKEAVRLFREMIEKAEAPDAVTYK 655
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 113/216 (52%), Gaps = 5/216 (2%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEEL-FDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+ + Y +LN V+V + +K E+ ++ G+ PDV T+N+ I LC+ + +
Sbjct: 155 GVVANTHFYNFLLN-VLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRP 213
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
I ++ ME+ G PD T+ T++Q + L+ + ++M G V+ T +++++
Sbjct: 214 AILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVN 273
Query: 355 GLASKGDIIEACGLLEE-ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
G +G I EA +EE +L +G F+ + GL + G V+ ALE++ M +
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333
Query: 414 PGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
P + + L+S + KL V+ + +++++Q++ C
Sbjct: 334 PDIYTYNS-LISGLCKLGEVDEA-VKVLNQMIERDC 367
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 141/280 (50%), Gaps = 4/280 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFC 203
+++ + A E+L + + + C I++ +C DL+ ++EL QEM G
Sbjct: 418 YKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELF---QEMISWGLK 474
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V YT +++ LVK+ + +A+ IL MK G+ PD+ CY V+ G + +
Sbjct: 475 PNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSY 534
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E++ GL P+VYTY +I+G C+ ++A + M + G P+ + L+ CK
Sbjct: 535 LVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCK 594
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ + M +G++ ++QT+S++I GL+ G + EA G+ E L+KGL
Sbjct: 595 DGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFT 654
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I LC+ G ++ A EL M K ++P + AL+
Sbjct: 655 YTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALI 694
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 151/299 (50%), Gaps = 9/299 (3%)
Query: 128 DAHRFQDSVNLFYKIPKFRINR-VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
D + + + +N + ++ K + V F +E C+ N T S++++ +C D+
Sbjct: 231 DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNL------VTYSVVIAGLCRAGDV- 283
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE L + M G Y +I ++++ + +L++M + G+KPD V YT
Sbjct: 284 -DEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTA 342
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG + Q D A ++ +E+ + + +TY I+GLCK ++E + + M +G
Sbjct: 343 LINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMG 402
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KPD+ TYN L++ KV+ + + EL+ E+K + + N +++GL GD+ A
Sbjct: 403 IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRAN 462
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L +E ++ GL ++ + GL + G +A+++L M D+ +SP + +++
Sbjct: 463 ELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIG 521
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 4/300 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R V A+E+ M N G D + ++ C Q+ S E + EM +G
Sbjct: 279 RAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQK--RSTEGKSMLDEMYTMGLKPD 336
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT +I VK+ + A + +M + IK + Y +++G+ D KAE+LF
Sbjct: 337 HVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFS 396
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ ++G+ PD+ TYN I G K N+E +++ +++ + ++ LC
Sbjct: 397 EMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCG 456
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L R EL +EM G+ N+ Y+ ++ GL +G EA +L ++GL ++
Sbjct: 457 DLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYN 516
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
I G C+ G + + L +M K + P + A + ++ SFI ++D
Sbjct: 517 TVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS 576
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 2/254 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI G + T + C ++ + E F+ EM G V T++I K
Sbjct: 538 MIAKGLKPNVYTYGAFIHGYCRAGEMQAAER-SFI-EMLDSGIAPNDVICTDLIDGYCKD 595
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
A M G+ PD+ ++++++G+ +A +F ELL GLVPDV+TY
Sbjct: 596 GNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTY 655
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+ LCK+ +++A ++ M + G P+++TYN L+ LCK+ E+ + REL +
Sbjct: 656 TSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPE 715
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG+ N TYS +I G ++ EA L G+ S ++ I G C+ G K
Sbjct: 716 KGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK 775
Query: 400 ALELLKQMADKDVS 413
AL L M ++ ++
Sbjct: 776 ALSLFLGMVEEGIA 789
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 4/273 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ +C+ DL E L EM +G + Y +I K + + A +L ++K
Sbjct: 378 LIHGLCKIGDLEKAEDL--FSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKK 435
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+ + + ++NG+ D +A ELF E++ GL P++ Y + GL K+ E
Sbjct: 436 ENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEE 495
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
IK++ M++ G PDV YNT++ CK ++ + + EM KG+ N+ TY I
Sbjct: 496 AIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIH 555
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G G++ A E L+ G+ + + I G C+ G KA + M D+ V P
Sbjct: 556 GYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLP 615
Query: 415 GARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
+ L+ LS KL F L+D+ L
Sbjct: 616 DVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGL 648
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M++ G +V Y+ VI L + V +AL + M + G+ PD Y +++G Q+
Sbjct: 257 DMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQK 316
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ + + DE+ +GL PD Y ING KQ+++ ++ M K + TY
Sbjct: 317 RSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYY 376
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ LCK+ +L + +L EM GI ++QTY+ +I+G ++ +A LL E +
Sbjct: 377 ALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKE 436
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
L + M + GLC G + +A EL ++M + P ++ ++ V + F
Sbjct: 437 NLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI+IL M + G D + ++ C+ + +E ++ EM G + Y
Sbjct: 496 AIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKM--EEGKSYLVEMIAKGLKPNVYTYGAF 553
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + ++ A +M GI P+ V T +++G + KA F +L G+
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGV 613
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDV T++V I+GL K ++ + + + + + G PDV TY +L+ LCK +L E
Sbjct: 614 LPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFE 673
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +M KGI N+ TY+ +I+GL G+I +A L + KGL S + I G C
Sbjct: 674 LHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYC 733
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + +A +L M V P + V+ AL+
Sbjct: 734 KSANLTEAFQLFHGMKLVGVPPDSFVYCALI 764
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 17/261 (6%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+C DG T C M G + ++ +I L K K+
Sbjct: 590 DGYCKDGNTTKAFAKFRC----------------MLDQGVLPDVQTHSVLIHGLSKNGKL 633
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+A+G+ +++ G+ PD+ YT +++ + + D A EL D++ G+ P++ TYN
Sbjct: 634 QEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNAL 693
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
INGLCK + ++ + E G + +TY+T++ CK L +L MK G+
Sbjct: 694 INGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGV 753
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ Y +IDG G+ +A L + +G+ + + F+ I G + G + +A +
Sbjct: 754 PPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPA-FNALIDGFFKLGKLIEAYQ 812
Query: 403 LLKQMADKDVSPGARVWEALL 423
L++ M D ++P + L+
Sbjct: 813 LVEDMVDNHITPNHVTYTILI 833
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
+VPDVYTY IN C+ VE G ++ MEE G P+++TY+ ++ LC+ +++
Sbjct: 227 AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEA 286
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL + M KG++ + Y+ +IDG + E +L+E GL + I G
Sbjct: 287 LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALING 346
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + A ++ ++M + + + AL+
Sbjct: 347 FVKQSDIGGAFQVKEEMFARKIKLNTFTYYALI 379
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 131/340 (38%), Gaps = 71/340 (20%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A CM++ G D +T S+++ + + L E +G E+ G + YT++
Sbjct: 601 AFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQ--EAMGVFSELLDKGLVPDVFTYTSL 658
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE------ 266
I +L K+ + A + + M GI P+IV Y ++NG+ + KA ELFD
Sbjct: 659 ISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGL 718
Query: 267 -----------------------------LLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+ ++G+ PD + Y I+G CK N E +
Sbjct: 719 ARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALS 778
Query: 298 MIACMEELGSK----------------------------------PDVITYNTLLQALCK 323
+ M E G P+ +TY L++ C
Sbjct: 779 LFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCT 838
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
V + +L EM+ + ++ N+ TY+ ++ G G E L +E + +G+
Sbjct: 839 VGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLA 898
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + G KAL+L+ M + V+ ++ L+
Sbjct: 899 WSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILI 938
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 122/262 (46%), Gaps = 3/262 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + A E+ + + G + T S I++ C+ +L+ E MK +G
Sbjct: 699 KLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLT--EAFQLFHGMKLVGVPPD 756
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I K AL + M +GI + +++G ++A +L +
Sbjct: 757 SFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVE 815
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ + P+ TY + I C N++ ++ M++ P+V+TY +LL ++
Sbjct: 816 DMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIG 875
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + L EM +GI + +S+M+D +G+ I+A L+++ L++G+ +++
Sbjct: 876 RRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYT 935
Query: 386 ETICGLCQRGLVRKALELLKQM 407
I LC+ + + L++L ++
Sbjct: 936 ILIDALCKHNNLSEVLKVLDEV 957
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 141/336 (41%), Gaps = 34/336 (10%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y+ +I L + + + D I ++ + +I Y + ++
Sbjct: 685 PNIVTYNALINGLCKLGEIAKARELFDGIPEK-GLARNSVTYSTIIAGYCKSANLTEAFQ 743
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
LF+ + + F C + DG C G T ++ LS LG V+E
Sbjct: 744 LFHGMKLVGVPPDSFVY----CALIDGCCKAGNT----------EKALSL--FLGMVEE- 786
Query: 198 KKLGFCFGMVD---YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
G+ + +I K K+ +A ++ M + I P+ V YT+++
Sbjct: 787 -------GIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTV 839
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL---GSKPDV 311
+ +AE+LF E+ ++P+V TY ++G N + +M + +E+ G KPD
Sbjct: 840 GNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGY---NRIGRRSEMFSLFDEMVARGIKPDD 896
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+ ++ ++ A K + +LV +M +G+ + Y+I+ID L ++ E +L+E
Sbjct: 897 LAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDE 956
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+G + +C + G +AL +L+ M
Sbjct: 957 VEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 126/237 (53%), Gaps = 1/237 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F MKK GF +V Y++++ ++V A I N M G+ PDI Y +++NG
Sbjct: 242 FAAMMKK-GFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFC 300
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ A LF+E+ ++P+V TYN I+GLCK + +K++ M + G PD+I
Sbjct: 301 KIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDII 360
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY++LL ALCK ++ L+ ++K +G+ N+ TY+I+I+GL G +A + E+
Sbjct: 361 TYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDL 420
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
L KG + + I C G+ +AL +L +M + P A +E ++ S K
Sbjct: 421 LVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDK 477
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 155/351 (44%), Gaps = 26/351 (7%)
Query: 48 TPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIE 107
T P + QIP S + + +PP E + VI + F +++S+ +
Sbjct: 150 TLPLSEMPQIPSHFSSFDSFKSTGTSPKNDPPQEPENSVI---SNGMLFAEVTSLRGDVN 206
Query: 108 K-RENFETPEFIFIDL---IKTYADAHRFQDSVNLFYKIPK--FRINRVGF--------- 152
RE F + F ++ + + T+ + +++ N+F + K F+ N V +
Sbjct: 207 NLRECFVSFMFQYLGMMAPVSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCL 266
Query: 153 ------AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
A I N M G D ++ +++++ C+ + +D + +EM +
Sbjct: 267 VKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIK--MTDAAMNLFEEMHCRKIIPNV 324
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K K+ AL ++++M G PDI+ Y+ +L+ + KA L +
Sbjct: 325 VTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTK 384
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L GL P++YTY + INGLCK E + + G +V TY ++ C
Sbjct: 385 LKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGM 444
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++ +M+ G + N TY I+I L K + +A LL E + +GL
Sbjct: 445 FGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGL 495
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 145/269 (53%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A+ +L M GF + T +++L S C ++ D+ ++EM G
Sbjct: 358 KLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFC--KNGMWDDTRALLEEMSAKGLTLN 415
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I +L K ++ +A+G++ +M+S G PDI Y ++ + E +AE +F+
Sbjct: 416 SQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFE 475
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
LL G+V + TYN I+ L + + +++ M G DV++YN L++A+CK
Sbjct: 476 NLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDG 535
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++R L++EM KGI N +Y+I+I L + + +A L ++ LN+GL ++
Sbjct: 536 NVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYN 595
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLC+ G + AL LL+++ +++V P
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHP 624
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 164/382 (42%), Gaps = 54/382 (14%)
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
H+L L F + +P +Y+ V+ LA D ++ + R+ F F
Sbjct: 124 HLLDQLPRRFGV---QPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
+ R+ R A+ +L M G D ++ ++C+
Sbjct: 181 AARALC------------------RLGRANEALALLRGMARHGCVPDAVLYQTVIHALCD 222
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP-- 239
Q ++ E + EM +G + + +V+R + +V +A ++++M + G P
Sbjct: 223 QGGVT--EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 280
Query: 240 -----------------------------DIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++V + V+ G + + +A EL++ + +
Sbjct: 281 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK 340
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G PD +TY++ ++GLCK + + ++++ ME+ G P+V+TY +L + CK +
Sbjct: 341 GCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDT 400
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
R L++EM KG+ LN Q Y+ MI L G + EA GL++E ++G ++ I
Sbjct: 401 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 460
Query: 391 LCQRGLVRKALELLKQMADKDV 412
LC + +A + + + ++ V
Sbjct: 461 LCNNEQMEEAEHMFENLLEEGV 482
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 154/344 (44%), Gaps = 25/344 (7%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+ L + + C+P Y ++ L + + +L +EK+ F + ++
Sbjct: 331 TELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKK-GFAPNVVTYTIVLH 389
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
++ + D+ L ++ +N G+ N MI C DG+
Sbjct: 390 SFCKNGMWDDTRALLEEMSAKGLTLNSQGY-----NGMIY-ALCKDGRM----------- 432
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
DE +G +QEM+ G + Y +I L E++ +A + + +G+ + +
Sbjct: 433 -----DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++ ++ + A L E+++ G DV +YN I +CK NV+ + ++ M
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E G KP+ ++YN L+ LCK R + EL K+M +G+ ++ TY+ +I+GL G +
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
A LLE+ N+ + ++ I C+ L+ A LL +
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
F FG+ R+L + + +AL +L M G PD V Y V++ + Q +A
Sbjct: 176 FTFGVA-----ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 230
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
L +E+L++G DV T++ + G+C V +++ M G P V+TY LLQ L
Sbjct: 231 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 290
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+VR+ + R ++ + +VL ++ +I G ++G + EA L E KG +
Sbjct: 291 CRVRQADEARAMLGRVPELNVVL----FNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 346
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + GLC+ G + A+ LL++M K +P + +L S
Sbjct: 347 HTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHS 390
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 176/413 (42%), Gaps = 56/413 (13%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+LL + + C P Y VI L + + +++L+ + L+
Sbjct: 196 ALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEML--------------LMGC 241
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG-KTCSLILSSVCEQRD 184
AD + F D V + RV A +++ M+ G C+ G T +L +C R
Sbjct: 242 AADVNTFDDVVRGMCGL-----GRVREAARLVDRMMTKG-CMPGVMTYGFLLQGLCRVR- 294
Query: 185 LSSDE---LLGFVQEMKK------LGFCFG----------------------MVDYTNVI 213
+DE +LG V E+ +G C Y+ ++
Sbjct: 295 -QADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILM 353
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
L K ++ A+ +L +M+ G P++V YT+VL+ + L +E+ GL
Sbjct: 354 HGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLT 413
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
+ YN I LCK ++ + +I M G PD+ +YNT++ LC ++ +
Sbjct: 414 LNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ + +G+V N TY+ +I L G +A L +E + G ++ I +C+
Sbjct: 474 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 533
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
G V ++L LL++MA+K + P V +L+S + K V + + L Q+LN
Sbjct: 534 DGNVDRSLVLLEEMAEKGIKPN-NVSYNILISELCKERRVRDA-LELSKQMLN 584
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 259 KAEELFDEL-LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITYNT 316
+A L D+L G+ P +YNV ++ L + + + + M P T+
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+ALC++ N L++ M G V + Y +I L +G + EA LL E L G
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ FD+ + G+C G VR+A L+ +M K PG + LL
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 287
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 163/329 (49%), Gaps = 26/329 (7%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I L ++ +F + VL+ ++ R TP+ F + LI A + ++
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRG--VTPDAFTYSALIHGLCKADKIEE------- 337
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
A ++L M G D S I+ + C+ L E +QEM+K
Sbjct: 338 -----------AEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL--EAQKTLQEMRKQR 384
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG-IKPDIVCYTMVLNGVIVQEDYVKA 260
+V Y VI L K K+ +A IL QM+ G + PD+V Y+ V+NG+ + V+A
Sbjct: 385 KSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 444
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
++L D + G PDV TY I+GLCK +E ++ M+ G P+V+TY TL+
Sbjct: 445 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 504
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN-KGLCT 379
LCK R+++ +++EM+ G NL TY+ M++GL G I EA L++ + + C+
Sbjct: 505 LCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECS 564
Query: 380 QSSMFDETIC-GLCQRGLVRKALELLKQM 407
+ TI L LV++A +LL+QM
Sbjct: 565 PDAATYRTIVNALMSSDLVQEAEQLLEQM 593
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 189/377 (50%), Gaps = 28/377 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFC---DISSVLDHIE--KRENFETPEFIFID 121
L S + +CEP +Y+ VI S FC D+ + L+ +E K F F
Sbjct: 99 LFRSELLASCEPDVCSYNIVI------SGFCNAGDLHAALELLEEMKSAGFAPDAFTHTP 152
Query: 122 LIKTYADAHRFQDSVNLFYK-------------IPKF-RINRVGFAIEILNCMINDGFCV 167
+I A+A +++ I F R ++ A+++L M G
Sbjct: 153 IITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPP 212
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ T ++++ ++C+ + + + V++M + GF ++ + +++ K+ V DA
Sbjct: 213 NLVTYNVLVDALCKLSMVGAAQ--DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARK 270
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L M + G++P++V Y+ +++G+ + +++A+E+ +E+ G+ PD +TY+ I+GLC
Sbjct: 271 LLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLC 330
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + +E +M+ M G PDV+ Y++++ A CK +L ++ ++EM+ + ++
Sbjct: 331 KADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVV 390
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKG-LCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +IDGL G I EA +LE+ G + + I GLC+ ++ +A +LL +
Sbjct: 391 TYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDR 450
Query: 407 MADKDVSPGARVWEALL 423
M +P + ++
Sbjct: 451 MCKAGCNPDVVTYTTII 467
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 5/274 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M G D T S ++ +C+ + E + ++ M G +V Y+++
Sbjct: 303 AKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQM--LRRMAGSGCTPDVVVYSSI 360
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG- 271
I + K K+ +A L +M+ PD+V Y V++G+ +A+ + +++ G
Sbjct: 361 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGD 420
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
++PDV TY+ INGLCK + + K++ M + G PDV+TY T++ LCK L
Sbjct: 421 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 480
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L++ MK G N+ TY+ +I GL + EA ++EE N G ++ + GL
Sbjct: 481 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 540
Query: 392 CQRGLVRKALELLKQMAD--KDVSPGARVWEALL 423
C G +++A +L+++M D + SP A + ++
Sbjct: 541 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 574
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 3/223 (1%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
GF + ++++ LV+ +K +A + +PD+ Y +V++G D A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
EL +E+ G PD +T+ I + +++ + + M G P+V+TY L+ A
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAA 188
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
+ ++L +L++EM+ +G NL TY++++D L + A ++++ + G
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F+ + G C+RG V A +LL M K + P + AL+
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 291
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L+ M G D T + I+ +C+ L E L +Q MK+ G +V YT +
Sbjct: 444 AQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL--LQGMKRAGCAPNVVTYTTL 501
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL--VL 270
I L K KV +A ++ +M++ G P++V Y ++NG+ V +A++L +
Sbjct: 502 ISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRA 561
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
PD TY +N L + V+ +++ M+ S
Sbjct: 562 ECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTTS 598
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 123/232 (53%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ MK GF +V Y +I SL + K+ AL +L+Q+ D P ++ YT+++ IV
Sbjct: 160 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIV 219
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ +A +L +E+L GL+PD+YTYN I G+CK+ VE ++I + G KPDVI+
Sbjct: 220 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVIS 279
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN LL+A + + +LV EM +G N TYSI+I L G I EA +L+ +
Sbjct: 280 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 339
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
K L + +D I LC+ G + A+ ++ M P + +L +
Sbjct: 340 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAA 391
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 157/368 (42%), Gaps = 70/368 (19%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS------------------- 186
++NR+ A ++LN M GF D T ++++ S+C +R L
Sbjct: 149 KVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVI 208
Query: 187 --------------SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+E + ++EM G M Y +IR + K+ V A ++ +
Sbjct: 209 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL 268
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG--------------------- 271
S G KPD++ Y ++L + Q + + E+L E+ G
Sbjct: 269 TSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRI 328
Query: 272 --------------LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
L PD Y+Y+ I+ LCK+ ++ I ++ M G PD++ YNT+
Sbjct: 329 DEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI 388
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L ALCK N+ E+ +++ G N+ +Y+ MI L S GD A G++ ++KG+
Sbjct: 389 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGV 448
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS--SVSKLDFVNT 435
++ I LC+ GLV +A+ LL M P + +LL V ++D
Sbjct: 449 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 508
Query: 436 SFIRLVDQ 443
F ++++
Sbjct: 509 MFAEMIEK 516
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ AI +L MI D + ++S++C++ L D +G + M G
Sbjct: 324 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL--DLAIGIMDYMISNGCLPD 381
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V+Y ++ +L K AL I N+++ G P++ Y +++ + D +A +
Sbjct: 382 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 441
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ PD TYN I+ LC+ VE I ++ ME+ G +P VI+YN +L LCKVR
Sbjct: 442 AMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 501
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
++ + EM KG N TY ++I+G+ G EA L ++ + +Q S
Sbjct: 502 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 558
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 143/299 (47%), Gaps = 9/299 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
++ L C++N G+ D C+ ++ +++ + + E F Y V
Sbjct: 87 SLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFA---YNAV 143
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K ++ A +LN+MK+ G PDIV Y +++ + + A ++ D+LL+
Sbjct: 144 ISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNC 203
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P V TY + I + + +K++ M G PD+ TYN +++ +CK + R E
Sbjct: 204 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 263
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ + KG ++ +Y+I++ ++G E L+ E ++G + I LC
Sbjct: 264 LITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLC 323
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPC 449
+ G + +A+ +LK M +K+++P ++ L+ L +LD I ++D +++ C
Sbjct: 324 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA----IGIMDYMISNGC 378
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 122/242 (50%), Gaps = 2/242 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S+++SS+C R DE + ++ M + Y +I +L K+ ++ A+GI++
Sbjct: 314 TYSILISSLC--RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD 371
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M S+G PDIV Y +L + + +A E+F++L +G P+V +YN I+ L
Sbjct: 372 YMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCG 431
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + M+ M G PD ITYN+L+ LC+ + L+ +M+ G + +Y+
Sbjct: 432 DRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYN 491
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ GL I +A G+ E + KG + + I G+ G +A+EL + +
Sbjct: 492 IVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551
Query: 411 DV 412
DV
Sbjct: 552 DV 553
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 125/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++ + + G D + +++L + Q E L V EM G V Y+ +
Sbjct: 261 AAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKL--VAEMFSRGCEPNKVTYSIL 318
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL + ++ +A+ +L M + PD Y +++ + + A + D ++ G
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD+ YN + LCK N +++ + +G P+V +YNT++ AL + +R
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+V M KG+ + TY+ +I L G + EA GLL++ G ++ + GLC
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 498
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + A+ + +M +K P + L+
Sbjct: 499 KVRRIDDAIGMFAEMIEKGCRPNETTYILLI 529
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 132/248 (53%), Gaps = 2/248 (0%)
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L S+ +++ S+ ++ +M G + +I L + V A+ +L +M
Sbjct: 99 LGSIAKKKQYST--VVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKL 156
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
GI+PD + + ++NG ++ + +A LF+E++ G PDV +Y+ INGLCK N
Sbjct: 157 GIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMA 216
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++++ MEE G KP+++ Y T++ +LCK +N +L+ EM +GI ++ TYS ++ G
Sbjct: 217 LQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHG 276
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
S G + EA L E + + + + F + GLC+ G+V +A + + M K P
Sbjct: 277 FCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPN 336
Query: 416 ARVWEALL 423
A + AL+
Sbjct: 337 AYTYNALM 344
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 142/271 (52%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + N M+ G D + S +++ +C+ + S L +++M++ G +V YT +
Sbjct: 181 AVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSM--ALQLLRKMEEKGCKPNLVAYTTI 238
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K V DA+ +L++M GI PD+V Y+ +L+G +A LF+E++ +
Sbjct: 239 IDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNV 298
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P+ T+ + ++GLCK+ V + M + G++P+ TYN L+ C +++ ++
Sbjct: 299 MPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQK 358
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ M KG + +Y+I+I+G + + EA LL E K L + + + GLC
Sbjct: 359 VLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLC 418
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
Q G ++AL L K+M + P + LL
Sbjct: 419 QVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+N V FAI +L M G D T + +++ C + ++ E +G EM + G
Sbjct: 139 RLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIK--EAVGLFNEMVRRGHQPD 196
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y+ VI L K AL +L +M+ G KP++V YT +++ + A +L
Sbjct: 197 VISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLS 256
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G+ PDV TY+ ++G C ++ + M P+ +T+ L+ LCK
Sbjct: 257 EMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEG 316
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ R + + M KG N TY+ ++DG + EA +L+ ++KG ++
Sbjct: 317 MVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYN 376
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+R + +A LL +M++K+++P + L+
Sbjct: 377 ILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLM 414
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++L+ M++ G D T S IL C L+ +L EM V +T +
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATIL--FNEMVGRNVMPNTVTFTIL 308
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K+ V +A + M G +P+ Y +++G + +A+++ D ++ G
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC 368
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V++YN+ ING CK+ ++ ++ M E PD +TY+TL+Q LC+V
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALN 428
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L KEM G++ +L TYS ++DGL G + EA LL+ + +++ I G+
Sbjct: 429 LFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMF 488
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + A EL ++ + P R + ++
Sbjct: 489 IAGKLEVAKELFSKLFADGIQPTIRTYTIMI 519
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K+ ++ +A +L +M + PD V Y+ ++ G+ +A LF E+
Sbjct: 375 YNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMC 434
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL+PD+ TY+ ++GLCK +++ +K++ M+E +PD++ YN L++ + +L
Sbjct: 435 SSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLE 494
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+EL ++ GI ++TY+IMI GL +G EA L + + G S ++ I
Sbjct: 495 VAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVII 554
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G Q A+ L+ +M K S + ++ LL
Sbjct: 555 QGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 118/239 (49%)
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+S D+ L M ++ +V++ + S+ KK++ + + NQM G+ ++
Sbjct: 71 ISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSL 130
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++N + V A + ++ LG+ PD T+N ING C + ++ + + M
Sbjct: 131 NILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR 190
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G +PDVI+Y+T++ LCK + +L+++M+ KG NL Y+ +ID L + +
Sbjct: 191 RGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVND 250
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL E +++G+ + + G C G + +A L +M ++V P + L+
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILV 309
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T S ++ +C+ E L +EM G ++ Y+ ++ L K + +AL
Sbjct: 406 DTVTYSTLMQGLCQVG--RPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L M+ I+PDIV Y +++ G+ + A+ELF +L G+ P + TY + I GL
Sbjct: 464 LLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL 523
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K+ + ++ ME+ G P+ +YN ++Q + ++ + L+ EM K +
Sbjct: 524 KEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSS 583
Query: 348 TYSIMIDGLASKGDII 363
T+ +++D L S+ +II
Sbjct: 584 TFQMLLD-LESRDEII 598
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 128/249 (51%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
L S +++ S+ ++ +M G + +I L + V A+ IL +M
Sbjct: 94 FLGSFAKKKQYST--VVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFK 151
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
GI P + ++NG+ + +A ELF+E++ G P+V +YN INGLCK N
Sbjct: 152 LGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSM 211
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ + ME+ G KPDV+TYNT++ +LCK R +N E + EM +GI N+ TY+ M+
Sbjct: 212 AVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVH 271
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G G + EA L +E + + + + + GLC+ G+V +A + + M +K V P
Sbjct: 272 GFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEP 331
Query: 415 GARVWEALL 423
+ AL+
Sbjct: 332 NISTYNALM 340
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ N M+ G + + + I++ +C+ + S + ++M++ G +V Y +
Sbjct: 177 AVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSM--AVDVFKKMEQNGCKPDVVTYNTI 234
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K V DA+ L++M GI P++ Y +++G + +A LF E++ +
Sbjct: 235 IDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDV 294
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD T + ++GLCK+ V + M E G +P++ TYN L+ C R +N ++
Sbjct: 295 MPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKK 354
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ + M +G + +Y+I+I+G + EA LL E +K L + + + GLC
Sbjct: 355 VFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLC 414
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
Q G ++AL + K+M + P + LL
Sbjct: 415 QFGRPKEALNIFKEMCSYGLLPNLVTYSILL 445
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 122/236 (51%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D + + +M KLG + +I L + K+ +A+ + N+M G +P+++ Y +
Sbjct: 140 DFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTI 199
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ + A ++F ++ G PDV TYN I+ LCK V ++ ++ M + G
Sbjct: 200 INGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGI 259
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P+V TYN ++ C + +LN L KEM + ++ + T +I++DGL +G + EA
Sbjct: 260 PPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARL 319
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E KG+ S ++ + G C + L+ +A ++ + M + +PG + L+
Sbjct: 320 VFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILI 375
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 21/268 (7%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
NCM++ GFC+ G+ +E +EM V T ++ L
Sbjct: 267 NCMVH-GFCILGQL----------------NEATRLFKEMVGRDVMPDTVTLTILVDGLC 309
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K+ V +A + M G++P+I Y +++G +Q +A+++F+ ++ G P V+
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
+YN+ ING CK ++ ++A M PD +TY+TL+Q LC+ + KEM
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC--GLCQRG 395
G++ NL TYSI++DG G + EA LL+ K L + ++ TI G+ G
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL--EPNIVHHTILIEGMFIAG 487
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+ A EL ++ + P R + ++
Sbjct: 488 KLEVAKELFSKLFADGIRPTIRTYTVMI 515
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 136/288 (47%), Gaps = 4/288 (1%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ M G + T + ++ C QR + +E + M + G G+ Y +I
Sbjct: 320 VFETMTEKGVEPNISTYNALMDGYCLQRLM--NEAKKVFEIMIRQGCAPGVHSYNILING 377
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K ++ +A +L +M + PD V Y+ ++ G+ +A +F E+ GL+P+
Sbjct: 378 FCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPN 437
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ TY++ ++G CK +++ +K++ M+E +P+++ + L++ + +L +EL
Sbjct: 438 LVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFS 497
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
++ GI ++TY++MI GL +G EA L + + G S ++ I G Q
Sbjct: 498 KLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQ 557
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQ 443
A+ L+ +M K S ++ LL + D + + F+R Q
Sbjct: 558 DSSTAIRLIDEMVGKRFSANLSTFQMLL--DLESQDEIISQFMRGSSQ 603
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL +M +P + + L ++ Y L +++ + G+ +VY+ NV I
Sbjct: 71 DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLI 130
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N LC+ N+V+ + ++ M +LG P T+N L+ LC ++ EL EM +G
Sbjct: 131 NCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE 190
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ +Y+ +I+GL G+ A + ++ G ++ I LC+ LV A+E
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEF 250
Query: 404 LKQMADKDVSPGARVWEALL 423
L +M D+ + P + ++
Sbjct: 251 LSEMLDRGIPPNVFTYNCMV 270
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 188/402 (46%), Gaps = 28/402 (6%)
Query: 46 LTTPPTKQQQQIPKQPHILSSLLHSFSIYNC-EPPPEAYHF--VIKTLAENSQFCDISSV 102
+ P Q QPH + SF++ PPP + F ++ +L +N ++ + S+
Sbjct: 21 IAIPTATLHYQSHSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISL 80
Query: 103 LDHIEKRENFETPEFIFID-LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL---- 157
E N TP+ + LI + + ++F I K + + L
Sbjct: 81 FKQFE--PNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGL 138
Query: 158 -------------NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+ ++ GF +D + +++ +C+ + + L +++++
Sbjct: 139 CFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARL--LRKLEGHSVKP 196
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y +I SL K + + DA + ++M GI PD+V YT +++G + +A L
Sbjct: 197 DVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLL 256
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK---PDVITYNTLLQAL 321
+E+ + + PDVYT++V I+ L K+ + + ++ EE+ K PD++TYN+L+ L
Sbjct: 257 NEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGL 316
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK L R L+KEMK GI ++ +Y+I++DGL G + A + L KG
Sbjct: 317 CKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNV 376
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GLC+ GL +A++L +M K P A + ++
Sbjct: 377 WPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTII 418
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A +LN M D T S+++ ++ E + DE + +EMK +V Y +
Sbjct: 252 AFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNS 311
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L K + A+ +L +MK GI+PD+ YT++L+G+ A+E F LLV G
Sbjct: 312 LIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKG 371
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+V+ YNV INGLCK + + + ME G P+ IT+ T++ AL + E ++
Sbjct: 372 CHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAE 431
Query: 332 ELVKEMKWKGIV 343
++++EM +G++
Sbjct: 432 KILREMIARGLL 443
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 5/231 (2%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+G A ++ + MI G D T + ++ C + E + EMK + +
Sbjct: 214 LGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMK--EAFSLLNEMKLKNINPDVYTF 271
Query: 210 TNVIRSLVK---KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ +I +L K K+ V +A+ + +MK + PDIV Y +++G+ +A L E
Sbjct: 272 SVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKE 331
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ PDVY+Y + ++GLCK +E + + G +V YN ++ LCK
Sbjct: 332 MKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGL 391
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+L +M+ KG + N T+ +I L+ K + +A +L E + +GL
Sbjct: 392 FGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 141/262 (53%), Gaps = 2/262 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R NRV A+ +++ M+ G+ D + I+ S+C+ R + ++ L F +E+ + G
Sbjct: 167 RRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRV--NDALDFFKEIGRKGIRPN 224
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT ++ L + DA +L M I P+++ Y+ +L+ + ++A+E+F+
Sbjct: 225 VVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFE 284
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ + + PD+ TY+ INGLC + ++ +M M G PDV++YNTL+ CK +
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAK 344
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +L ++M +G+V N TY+ +I G GD+ +A + + G+ ++
Sbjct: 345 RVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYN 404
Query: 386 ETICGLCQRGLVRKALELLKQM 407
+ GLC GL+ KAL + + M
Sbjct: 405 ILLGGLCDNGLLEKALVIFEDM 426
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 132/275 (48%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+ +L M+ G+ D T +++ C + +S + + V +M ++G+ +V
Sbjct: 135 QVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVS--DAVSLVDKMVEIGYRPDIVA 192
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I SL K +V DAL ++ GI+P++V YT ++NG+ + A L +++
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ P+V TY+ ++ K V ++ M + PD++TY++L+ LC ++
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ M KG ++ +Y+ +I+G + + L + +GL + ++ I
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G Q G V KA E QM VSP + LL
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILL 407
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 122/241 (50%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
RD+ + + +EM K +VD+ ++ ++VK +K + + +M+ GI+ D+
Sbjct: 62 RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+ +V+N A + ++L LG PD T +NG C++N V + ++ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E+G +PD++ YN ++ +LCK R +N + KE+ KGI N+ TY+ +++GL + G
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+A LL + + + + + + + G V +A E+ ++M + P + +L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301
Query: 423 L 423
+
Sbjct: 302 I 302
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 158/358 (44%), Gaps = 32/358 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P AY+ +I +L + + D I R+ + L+ ++ R+ D+
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEI-GRKGIRPNVVTYTALVNGLCNSGRWNDAA 245
Query: 137 NLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGK----------------TCSLILSS 178
L + K +I N + ++ +L+ + +G ++ K T S +++
Sbjct: 246 RLLRDMIKRKITPNVITYS-ALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+C + DE M G CF +V Y +I K ++V D + + +M G+
Sbjct: 305 LCLHDRI--DEANQMFDLMVSKG-CFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+ V Y ++ G D KA+E F ++ G+ PD++TYN+ + GLC +E +
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M++ D++TY T++Q +CK ++ L + KG+ ++ TY+ M+ GL
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC-QRGLVRKALELLKQMADKDVSP 414
+KG E L + +GL SM LC G + + EL+K+M +P
Sbjct: 482 TKGLQHEVEALYTKMKQEGLMKNDSM-------LCLGDGDITISAELIKKMLSCGYAP 532
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ ++M+ LG + + VI +V AL +L +M G +PD V +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSL 161
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG + A L D+++ +G PD+ YN I+ LCK V + + G
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGI 221
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+V+TY L+ LC N L+++M + I N+ TYS ++D G ++EA
Sbjct: 222 RPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ EE + + + I GLC + +A ++ M K P + L+
Sbjct: 282 IFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLI 337
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 144/271 (53%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ + M+ G D T + I++ +C+ + ++ G +++M ++G +V Y+ +
Sbjct: 180 ALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAA--GLIKKMGEVGCQPDVVTYSTL 237
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K V +AL I + MK+ GI P +V YT ++ G+ + +A + +E+ L +
Sbjct: 238 IDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNI 297
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD+ T+++ I+ CK+ NV ++ M E+G +P+VITYN+L+ E+ R+
Sbjct: 298 MPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARK 357
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L M +G ++ +YSI+I+G I EA L E +++GL + + I C
Sbjct: 358 LFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFC 417
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
Q G +R+A EL K M P + LL
Sbjct: 418 QLGKLREARELFKDMHTNGYLPDLCTYSVLL 448
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 137/276 (49%), Gaps = 3/276 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ R D ++ ++M+ G +I + V +L ++
Sbjct: 96 LLSAIVRMRQYY-DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIK 154
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G++P I+ +T ++NG+ ++ +A ELFD+++ G PDVYTY INGLCK A
Sbjct: 155 LGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAA 214
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+I M E+G +PDV+TY+TL+ +LCK R +N ++ MK KGI + +Y+ +I
Sbjct: 215 AAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQ 274
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL S EA +L E + + F I C+ G V +A +LK M + V P
Sbjct: 275 GLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEP 334
Query: 415 GARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ +L+ +++ V +L D ++ CK
Sbjct: 335 NVITYNSLMHGYSLQMEVVEAR--KLFDVMITRGCK 368
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 122/235 (51%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + EM L +V ++ +I K+ V +A G+L M G++P+++ Y ++
Sbjct: 284 EASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLM 343
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G +Q + V+A +LFD ++ G PDV++Y++ ING C ++ ++ M G
Sbjct: 344 HGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLT 403
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+ ++Y TL+ A C++ +L REL K+M G + +L TYS++++G +G + +A L
Sbjct: 404 PNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L M+ I +C+ G + A +L ++ + P +++ ++
Sbjct: 464 FRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTII 518
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +LN M + D T SL++ C++ ++ E G ++ M ++G ++ Y ++
Sbjct: 285 ASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVL--EAQGVLKTMTEMGVEPNVITYNSL 342
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + +V +A + + M + G KPD+ Y++++NG + + +A++LF+E++ GL
Sbjct: 343 MHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +Y I+ C+ + ++ M G PD+ TY+ LL+ CK L +
Sbjct: 403 TPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFR 462
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L + M+ + NL Y+I+ID + G++ A L E GL ++ I GLC
Sbjct: 463 LFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLC 522
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GL+ +ALE ++M + P + ++
Sbjct: 523 KEGLLDEALEAFRKMEEDGCPPNEFSYNVII 553
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 10/260 (3%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T S ++ S+C+ R + +E L MK G +V YT++I+ L + +A
Sbjct: 230 DVVTYSTLIDSLCKDRLV--NEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+LN+M S I PDIV ++++++ + + ++A+ + + +G+ P+V TYN ++G
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
Q V K+ M G KPDV +Y+ L+ C V+ ++ ++L EM +G+ N
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKG----LCTQSSMFDETICGLCQRGLVRKALEL 403
+Y+ +I G + EA L ++ G LCT S + + G C++G + KA L
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLE----GFCKQGYLGKAFRL 463
Query: 404 LKQMADKDVSPGARVWEALL 423
+ M + P ++ L+
Sbjct: 464 FRAMQGTYLKPNLVMYTILI 483
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 5/262 (1%)
Query: 191 LGF--VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
LGF + ++ KLG ++ +T +I L K + AL + + M + G +PD+ YT ++
Sbjct: 144 LGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTII 203
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG+ + A L ++ +G PDV TY+ I+ LCK V + + + M+ G
Sbjct: 204 NGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGIS 263
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P V++Y +L+Q LC ++ EM I+ ++ T+S++ID +G+++EA G+
Sbjct: 264 PTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGV 323
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSS 426
L+ G+ ++ + G + V +A +L M + P + L+
Sbjct: 324 LKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCM 383
Query: 427 VSKLDFVNTSFIRLVDQILNTP 448
V ++D F ++ Q L TP
Sbjct: 384 VKRIDEAKQLFNEMIHQGL-TP 404
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 102/197 (51%), Gaps = 2/197 (1%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ A ++ N MI+ G + + + ++ + C+ L E ++M G+ +
Sbjct: 384 VKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLR--EARELFKDMHTNGYLPDL 441
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y+ ++ K+ + A + M+ +KP++V YT++++ + + A +LF E
Sbjct: 442 CTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSE 501
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L V GL PDV Y INGLCK+ ++ ++ MEE G P+ +YN +++ + ++
Sbjct: 502 LFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKD 561
Query: 327 LNRLRELVKEMKWKGIV 343
+R +L+ EM+ KG V
Sbjct: 562 ESRAVQLIGEMRDKGFV 578
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 2/225 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + MI G D + S++++ C + + DE EM G V YT +
Sbjct: 355 ARKLFDVMITRGCKPDVFSYSILINGYCMVKRI--DEAKQLFNEMIHQGLTPNTVSYTTL 412
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + K+ +A + M ++G PD+ Y+++L G Q KA LF + L
Sbjct: 413 IHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYL 472
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ Y + I+ +CK N+ K+ + + G +PDV Y T++ LCK L+ E
Sbjct: 473 KPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALE 532
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++M+ G N +Y+++I G D A L+ E +KG
Sbjct: 533 AFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGF 577
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
++ F ++ K R R E+ M +G+ D T S++L C+Q L + +
Sbjct: 413 IHAFCQLGKLREAR-----ELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLG--KAFRLFR 465
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
M+ +V YT +I S+ K + A + +++ G++PD+ YT ++NG+ +
Sbjct: 466 AMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEG 525
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+A E F ++ G P+ ++YNV I G + + +++I M + G D
Sbjct: 526 LLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 143/263 (54%), Gaps = 4/263 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++S +C R + +E GF +EM G Y ++ L K ++ +A +L+
Sbjct: 282 TYNVMISGLC--RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLD 339
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M G+KP++V Y +++G + + +A ++ +E++ G+ P+ Y+ I GLCK
Sbjct: 340 EMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIG 399
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ K++ M ++G +PD TY+ L+Q + + + EL+ EM+ GI+ N TY
Sbjct: 400 QLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYG 459
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
IMI+GL G+ EA LLEE +++GL + M+ I G + G + A E L+ M
Sbjct: 460 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKA 519
Query: 411 DVSPGARVWEALL--LSSVSKLD 431
+V P + +L+ LS+V +++
Sbjct: 520 NVLPDLFCYNSLIKGLSTVGRIE 542
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 2/254 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ +++K G Y+ +I K + A +L QM + G+KP+ YT +L G
Sbjct: 547 YYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYF 606
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
D+ K + +L G PD + Y + I L + N+E ++ +E+ G PD+
Sbjct: 607 KSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 666
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y++L+ LCK+ ++ + L+ EM +G+ + Y+ +IDG GDI A + +
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 726
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
L KGL + I G C+ G + A +L K M D+ ++P A V+ L D
Sbjct: 727 LAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADL 786
Query: 433 VNTSFIRLVDQILN 446
F L +++ N
Sbjct: 787 EQALF--LTEEMFN 798
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 160/356 (44%), Gaps = 22/356 (6%)
Query: 68 LHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYA 127
L + + N P Y+ +IK L+ + + ++KR EF + LI Y
Sbjct: 513 LENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKR-GLVPDEFTYSGLIHGYC 571
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
+ A ++L M+N G + T + +L + D
Sbjct: 572 KTRNLEK------------------ADQLLQQMLNSGLKPNADTYTDLLEGYFKSND--H 611
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+++ +Q M G Y VIR+L + E + A +L +++ +G+ PD+ Y+ +
Sbjct: 612 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 671
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G+ D KA L DE+ GL P + YN I+G C+ ++ + + G
Sbjct: 672 ISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 731
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P+ +TY L+ CK ++ +L K+M +GI + Y+++ G + D+ +A
Sbjct: 732 LPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALF 791
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L EE N+G S+F + G C+RG +++ +LL M D+++ P A+ E ++
Sbjct: 792 LTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVI 846
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+LN M N G + T ++++ +C+ + S E ++EM G Y +
Sbjct: 439 AFELLNEMRNSGILPNAYTYGIMINGLCQNGE--SKEAGNLLEEMISEGLKPNAFMYAPL 496
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ + A L M + PD+ CY ++ G+ +AEE + ++ GL
Sbjct: 497 IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGL 556
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPD +TY+ I+G CK N+E +++ M G KP+ TY LL+ K + ++
Sbjct: 557 VPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSS 616
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+++ M G + Y I+I L+ ++ A +L E GL ++ I GLC
Sbjct: 617 ILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC 676
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + KA+ LL +MA + + PG + AL+
Sbjct: 677 KMADMEKAVGLLDEMAKEGLEPGIVCYNALI 707
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M+ GI PD+ Y+ L D+ A+++F+E+ + TYNV I+GLC+
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
VE M + G PD TY L+ LCK L + L+ EM G+ N+ Y+
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
++DG +G EA +L E ++ G+ M+D I GLC+ G + +A +LL +M
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415
Query: 412 VSPGARVWEALLLSSVSKLD 431
P + L+ D
Sbjct: 416 HRPDTFTYHPLMQGHFQHYD 435
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 16/261 (6%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DGF +GK E + EM G + Y N+IR L K ++
Sbjct: 358 DGFMKEGKAA----------------EAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQL 401
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
A +LN+M G +PD Y ++ G D A EL +E+ G++P+ YTY +
Sbjct: 402 GRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIM 461
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
INGLC+ + ++ M G KP+ Y L+ K ++ E ++ M +
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ +L Y+ +I GL++ G I EA + +GL + I G C+ + KA +
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581
Query: 403 LLKQMADKDVSPGARVWEALL 423
LL+QM + + P A + LL
Sbjct: 582 LLQQMLNSGLKPNADTYTDLL 602
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 4/291 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D T +++ +C+ L E + EM G +V Y ++ +K+
Sbjct: 306 MVDYGLSPDAFTYGALMNGLCKGGRLK--EAKALLDEMSCSGLKPNVVVYATLVDGFMKE 363
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K +A ILN+M S G++P+ + Y ++ G+ +A +L +E++ +G PD +TY
Sbjct: 364 GKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY 423
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ + G + + + +++ M G P+ TY ++ LC+ E L++EM
Sbjct: 424 HPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMIS 483
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ N Y+ +I G + +G I AC LE + ++ I GL G + +
Sbjct: 484 EGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEE 543
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
A E Q+ + + P + L+ + +L+ Q+LN+ K
Sbjct: 544 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKAD--QLLQQMLNSGLK 592
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%)
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
LGL P N + L + + +E K+ ME G PDV TY+T L+A CK R+ +
Sbjct: 204 LGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDA 263
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+++ +EM+ + +N TY++MI GL G + EA G EE ++ GL + + +
Sbjct: 264 AKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMN 323
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G +++A LL +M+ + P V+ L+
Sbjct: 324 GLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLV 357
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 122/218 (55%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I S+ K + V +A + ++M S GI PD+V Y +++G + A +LF+
Sbjct: 212 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFN 271
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ + P+VYT+N+ ++G CK+ ++ ++A M + G KPDV TYN+L+ C V+
Sbjct: 272 KMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVK 331
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+N+ + + + +G+ N+ +YSIMI G + EA L +E + ++
Sbjct: 332 EVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYN 391
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G + AL+L+ +M D+ V + ++L
Sbjct: 392 SLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 145/277 (52%), Gaps = 2/277 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ N MI + + T ++++ C++R L E + M K G + Y ++
Sbjct: 266 ATDLFNKMIFENINPNVYTFNILVDGFCKERRLK--EAKNVLAMMMKQGIKPDVFTYNSL 323
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ ++V A I N + G+ P+I Y+++++G + +A LF E+ +
Sbjct: 324 MDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI 383
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDV TYN I+GLCK + +K++ M + G D ITYN++L ALCK ++++
Sbjct: 384 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 443
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ +MK +GI ++ TY+ ++DGL G + +A + E+ L KG +++ I G C
Sbjct: 444 LLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFC 503
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
GL ++L+LL +M + P A +E ++ S K
Sbjct: 504 SHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDK 540
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 129/264 (48%), Gaps = 9/264 (3%)
Query: 167 VDGKTC-------SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
VDGK + I+ S+C+ + + +E EM G +V Y +I
Sbjct: 203 VDGKLVQPNVVMYNTIIDSMCKVKLV--NEAFDLYSEMVSKGISPDVVTYNALISGFCIV 260
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ DA + N+M + I P++ + ++++G + +A+ + ++ G+ PDV+TY
Sbjct: 261 GKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTY 320
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N ++ C V + + + G P++ +Y+ ++ CK+++++ L KEM
Sbjct: 321 NSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHC 380
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
I+ ++ TY+ +IDGL G I A L++E ++G+ ++ + LC+ V K
Sbjct: 381 NNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDK 440
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A+ LL +M D+ + P + L+
Sbjct: 441 AIALLTKMKDEGIQPDICTYTTLV 464
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 23/308 (7%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK------TCSLI 175
LI + + +D+ +LF K+ IN + IL DGFC + + +++
Sbjct: 253 LISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV----DGFCKERRLKEAKNVLAMM 308
Query: 176 LSSVCEQRDLSSDELLG---FVQEMKKLGFCFGMVD----------YTNVIRSLVKKEKV 222
+ + + + L+ V+E+ K F + Y+ +I K +KV
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+A+ + +M + I PD+V Y +++G+ A +L DE+ G+ D TYN
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
++ LCK + V+ I ++ M++ G +PD+ TY TL+ LCK L R + +++ KG
Sbjct: 429 LDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGY 488
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+L++ Y+ MI G S G E+ LL + G + ++ IC L + KA +
Sbjct: 489 ILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEK 548
Query: 403 LLKQMADK 410
LL++M +
Sbjct: 549 LLREMITR 556
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 105/199 (52%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ +L ++ G +P+++ T ++ G+ ++ +A + D+++ LG + +Y IN
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLCK A ++++ ++ +P+V+ YNT++ ++CKV+ +N +L EM KGI
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
++ TY+ +I G G + +A L + + + + F+ + G C+ +++A +L
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305
Query: 405 KQMADKDVSPGARVWEALL 423
M + + P + +L+
Sbjct: 306 AMMMKQGIKPDVFTYNSLM 324
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 2/197 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I +V A+ + M + D T + ++ +C+ +S L V EM G
Sbjct: 364 KIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISY--ALKLVDEMHDRGVPHD 421
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +++ +L K +V A+ +L +MK +GI+PDI YT +++G+ A +F+
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFE 481
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+LLV G + DV Y I G C + + +++ MEE G P+ +TY ++ +L
Sbjct: 482 DLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKD 541
Query: 326 ELNRLRELVKEMKWKGI 342
E ++ +L++EM +G+
Sbjct: 542 ENDKAEKLLREMITRGL 558
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ V A I N + G + + S+++ C+ + + DE + +EM +
Sbjct: 330 VKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV--DEAMNLFKEMHCNNIIPDV 387
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K K+ AL ++++M G+ D + Y +L+ + KA L +
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 447
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ PD+ TY ++GLCK +E + + G DV Y ++Q C
Sbjct: 448 MKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGL 507
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ +L+ +M+ G + N TY I+I L K + +A LL E + +GL
Sbjct: 508 FDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%)
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
KP I + +L ++ Y L ++ G+ D+ ++ IN +
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++A + ++G +P+VIT TL++ LC ++++ + ++ G LN +Y +I+GL
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G A LL K + M++ I +C+ LV +A +L +M K +SP
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248
Query: 418 VWEALL 423
+ AL+
Sbjct: 249 TYNALI 254
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 148/296 (50%), Gaps = 8/296 (2%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
+AH + +NL+ K + ++ A M++ G + ++++ C+ + +
Sbjct: 555 NAHTYGAFINLYSKSGEIQV-----AERYFKDMLSSGIVPNNVIYTILIKGHCDVGN--T 607
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
E L + M + G + Y+ +I SL K K +A+G+ + G+ PD+ Y +
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G + D KA +L+DE+L G+ P++ YN INGLCK V ++ +EE
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PDV+TY+T++ CK L +L EM KGI + Y I+IDG +G++ +A
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L EA K + + S+ F+ I C+ G V +A EL M DK ++P + L+
Sbjct: 788 LFHEAQQKSVGSLSA-FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 842
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 135/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M+ G DG T +L++ C+Q+ +L+ + M G YT +
Sbjct: 295 ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI--FESMPSSGLNPNRFTYTAL 352
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +K+ + +AL I ++M + G+K ++V Y ++ G+ + KA LF+E+L+ GL
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD +TYN+ I+G K +++ +++A M+ P TY+ L+ LC +L + E
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ +M G+ N+ Y +I + A LL+ + G+ ++ I GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ V +A LL M +K + P A + A +
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 138/284 (48%), Gaps = 5/284 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+ N +G ++ M+ D T + ++ + C+ D+ +++ + EM+K C
Sbjct: 218 LKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV--LSEMEKE--CK 273
Query: 205 -GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ Y I L + V +AL + M G+ PD YT++++G Q+ +A+ +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F+ + GL P+ +TY I+G K+ N+E +++ M G K +V+TYN ++ + K
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
E+ + L EM G+ + TY+++IDG D+ +AC LL E + L
Sbjct: 394 AGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ I GLC ++KA E+L QM V P ++ L+ + V
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYV 497
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 128/273 (46%), Gaps = 3/273 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ CM+ G D + S I+ S+ ++ + E +G + K G + Y ++
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHSL--SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ + A + ++M +GI P+IV Y ++NG+ + KA ELFDE+ L
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPDV TY+ I+G CK N+ K+ M G PD Y L+ K L +
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L E + K V +L ++ +ID G +IEA L ++ ++K L + I
Sbjct: 788 LFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYG 846
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ ++ +A +L M +++ P + +LLLS
Sbjct: 847 KAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 879
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 6/295 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGFCFGMVDYTN 211
A+ + N M+ G D T +L++ + D++ ELL EMK Y+
Sbjct: 400 AMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLA---EMKARKLTPSPFTYSV 456
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L + A +L+QM +G+KP++ Y ++ + + Y A EL ++ G
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
++PD++ YN I GLC+ VE ++ M E G KP+ TY + K E+
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAE 576
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
K+M GIV N Y+I+I G G+ +EA + L KGL + I L
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSL 636
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ G ++A+ + + V P ++ +L+ + D S +L D++L+
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS--QLYDEMLH 689
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 125/254 (49%), Gaps = 4/254 (1%)
Query: 171 TCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T S+++S +C DL ++E+L +M + G + Y +I++ V++ + A+ +L
Sbjct: 453 TYSVLISGLCHSSDLQKANEVL---DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M ++G+ PD+ CY ++ G+ + +A+ L ++ G+ P+ +TY +IN K
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
++ + M G P+ + Y L++ C V K M KG++ +++ Y
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
S +I L+ G EA G+ + L G+ +++ I G C+ G + KA +L +M
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689
Query: 410 KDVSPGARVWEALL 423
++P V+ L+
Sbjct: 690 NGINPNIVVYNTLI 703
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT ++ K+++ +A I M S G+ P+ YT +++G I + + +A + DE++
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL +V TYN I G+ K + + + M G +PD TYN L+ K ++
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMA 433
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ EL+ EMK + + + TYS++I GL D+ +A +L++ + G+ M+ I
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLI 493
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
Q A+ELLK M V P + L++
Sbjct: 494 KAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 8/241 (3%)
Query: 190 LLGFVQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
+LGF+ E + GF ++ N++R L+K + + M I PD+
Sbjct: 184 VLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVY 243
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
YT V+ D +K + + E + P+++TYN +I GLC+ V+ +++ M
Sbjct: 244 TYTNVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLM 302
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E G PD TY L+ CK + + + + M G+ N TY+ +IDG +G+I
Sbjct: 303 MEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNI 362
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
EA + +E + +GL ++ I G+ + G + KA+ L +M + P + L
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLL 422
Query: 423 L 423
+
Sbjct: 423 I 423
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 166/384 (43%), Gaps = 59/384 (15%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSV 136
P AY +I +L++N + + V ++ + P+ F++ LI + + +
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK-TCSLILSSVCEQRDLSSDELLGFVQ 195
L+ ++ IN I + N +IN G C G+ T + L E++DL D
Sbjct: 682 QLYDEMLHNGINP---NIVVYNTLIN-GLCKLGEVTKARELFDEIEEKDLVPD------- 730
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+V Y+ +I K + +A + ++M S GI PD Y ++++G +
Sbjct: 731 ----------VVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 780
Query: 256 DY----------------------------------VKAEELFDELLVLGLVPDVYTYNV 281
+ ++A ELFD+++ L P++ TY +
Sbjct: 781 NLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTI 840
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+ K +E ++ ME P+ +TY +LL + ++ ++ L K+M+ +G
Sbjct: 841 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
I + Y +M +G +EA LL ++L +G+ + +FD I LC+ + L
Sbjct: 901 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 960
Query: 402 ELLKQMADKDVSPGARVWEALLLS 425
ELL +M +++S ++ LLL
Sbjct: 961 ELLSEMGKEELSLSSKTCNTLLLG 984
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 3/279 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + AI++++ + N G D + I++ C + D + MK GF
Sbjct: 103 FTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGFCRANRI--DSAYQVLDRMKNKGFSP 159
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y +I SL + + AL NQ+ + KP +V YT+++ ++Q +A +L
Sbjct: 160 DIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLL 219
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L + L PD++TYN I G+C++ V+ ++I+ + G PDVITYN LL+ L
Sbjct: 220 DEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQ 279
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ EL+ +M +G N+ TYS++I + G + E GLL++ KGL +
Sbjct: 280 GKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCY 339
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
D I LC+ G V A+E+L M P + +L
Sbjct: 340 DPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTIL 378
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 70/350 (20%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS------------------ 187
R NR+ A ++L+ M N GF D T ++++ S+C + L S
Sbjct: 138 RANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVV 197
Query: 188 ---------------DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
DE + + EM ++ M Y ++IR + ++ V A I++ +
Sbjct: 198 TYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSI 257
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
S G PD++ Y ++L G++ Q + EL +++ G +V TY+V I+ +C+ V
Sbjct: 258 SSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKV 317
Query: 293 EAGIKMIACMEELGSK-----------------------------------PDVITYNTL 317
E G+ ++ M++ G K PD++ YNT+
Sbjct: 318 EEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTI 377
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L LCK + + + +++ G N +Y+ M L S G + A G++ E L+KG+
Sbjct: 378 LACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGV 437
Query: 378 CTQSSMFDETICGLCQRGLVRKALELL--KQMADKDVSPGARVWEALLLS 425
++ I LC+ G+V +A+ELL +M + P + +LL
Sbjct: 438 DPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 487
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 134/260 (51%), Gaps = 4/260 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
E+++ M+ G + T S+++SSVC RD +E +G +++MKK G Y +I
Sbjct: 287 ELMSDMVARGCEANVVTYSVLISSVC--RDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIA 344
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L K+ +V A+ +L+ M SDG PDIV Y +L + Q+ +A +F++L +G P
Sbjct: 345 ALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSP 404
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ +YN + L + + MI M + G PD ITYN+L+ LC+ ++ EL+
Sbjct: 405 NASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELL 464
Query: 335 KEMKWKGIVL--NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+M+ + ++ +Y+I++ GL + +A +L ++KG + + I G+
Sbjct: 465 VDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIG 524
Query: 393 QRGLVRKALELLKQMADKDV 412
G + A +L + + D
Sbjct: 525 FGGCLNDARDLATTLVNMDA 544
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK N + + + G KPDV+ L+ L + +++ +++ ++ G +L
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHP-DL 126
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
Y+ +I G I A +L+ NKG ++ I LC RG++ ALE Q
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186
Query: 407 MADKDVSPGARVWEALL 423
+ ++ P + L+
Sbjct: 187 LLKENCKPTVVTYTILI 203
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 144/269 (53%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R G A+ +L+ M G + T S +L S C R+ D+ + +M GF
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC--RNGMWDDARAMLDQMLAKGFSMN 417
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I +L K K+ A ++ +MKS G KPDI Y ++ + + +AE +F
Sbjct: 418 SQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFR 477
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L+ G+V + TYN I+ L + + G+++ + M G + DVI+YN L++ALCK
Sbjct: 478 NLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEG 537
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++R L++EM KGI N +Y+++I+ L G + +A L +E LN+GL ++
Sbjct: 538 NVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYN 597
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLC+ G AL LL+++ +++V P
Sbjct: 598 TLINGLCKVGWTHAALNLLEKLPNENVHP 626
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 139/318 (43%), Gaps = 47/318 (14%)
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKK----LGFCFGMVDYTNVIRSLVKKEKVFDA 225
++ +++LS++ + D +D LL + + ++ F FG+ R+L + + DA
Sbjct: 143 RSYNVVLSTL-ARADCHADALLLYRRMLRDRVPPTTFTFGVA-----ARALCRLGRAGDA 196
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
L +L M G PD V Y V++ ++ Q +A L DE+L++G DV T+N + G
Sbjct: 197 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLG 256
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE------------------- 326
LC V +++ M G P V+TY LLQ LC+ R+
Sbjct: 257 LCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVML 316
Query: 327 ------------LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
L R EL + M KG ++ TYSI++ GL G A +L+E
Sbjct: 317 NTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEE 376
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDF 432
KG + + C+ G+ A +L QM K S ++ + ++ L KLD
Sbjct: 377 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLD- 435
Query: 433 VNTSFIRLVDQILNTPCK 450
RLV ++ + CK
Sbjct: 436 ---QATRLVQEMKSQGCK 450
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 154/346 (44%), Gaps = 23/346 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
C P Y ++ L + +F +LD +E E P + + L+ ++ +
Sbjct: 343 GCPPDVHTYSILMHGLCKLGRFGSAVRMLDEME--EKGCAPNIVTYSTLLHSFCRNGMWD 400
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
D A +L+ M+ GF ++ + + I+ ++C+ L D+
Sbjct: 401 D------------------ARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKL--DQATRL 440
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
VQEMK G + Y +I L + + +A I + +G+ + + Y +++ ++
Sbjct: 441 VQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLR 500
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ + L E+L+ G DV +YN I LCK+ NV+ + ++ M G KP+ +
Sbjct: 501 NGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFS 560
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN L+ LCK ++ EL KEM +G+ ++ TY+ +I+GL G A LLE+
Sbjct: 561 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLP 620
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
N+ + ++ I C+ L+ A LL + + P R W
Sbjct: 621 NENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTW 666
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 182/422 (43%), Gaps = 57/422 (13%)
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
H+L + F++ P +Y+ V+ TLA C ++L + + P F
Sbjct: 127 HLLDQMPRRFAV---SPSFRSYNVVLSTLARAD--CHADALLLYRRMLRD-RVPPTTF-- 178
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
T+ A R R+ R G A+ +L M G D ++ ++
Sbjct: 179 ---TFGVAAR-----------ALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVA 224
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
Q ++ +L + EM +G + + +++ L +V +A ++++M + G P +
Sbjct: 225 QGGVAEAAML--LDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSV 282
Query: 242 VCYTMVLNGV-------------------------------IVQEDYVKAEELFDELLVL 270
V Y +L G+ + + +A EL++ +
Sbjct: 283 VTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSK 342
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G PDV+TY++ ++GLCK + ++M+ MEE G P+++TY+TLL + C+ +
Sbjct: 343 GCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDA 402
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
R ++ +M KG +N Q Y+ +I L G + +A L++E ++G ++ I
Sbjct: 403 RAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYH 462
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
LC L+ +A + + + ++ V + L+ + + + +RL ++L C+
Sbjct: 463 LCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRW--QEGLRLASEMLLHGCQ 520
Query: 451 ME 452
++
Sbjct: 521 LD 522
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 1/189 (0%)
Query: 225 ALGILNQM-KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
AL +L+QM + + P Y +VL+ + + + A L+ +L + P +T+ V
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
LC+ + ++ M G PD + Y T++ AL + L+ EM G
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ T++ ++ GL G + EA L++ + +G + + GLC+ +A +
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304
Query: 404 LKQMADKDV 412
L ++ + +V
Sbjct: 305 LGRLPEVNV 313
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 124/218 (56%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I S+ K + V +A + ++M S+GI PD+V Y+ +++G + A +LF+
Sbjct: 178 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFN 237
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++++ + PDVYT+N+ ++G CK ++ G + A M + G KP+V+TY +L+ C V+
Sbjct: 238 KMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK 297
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++N+ + M G+ + Q+Y+IMI+G + EA L ++ K + +
Sbjct: 298 QVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYT 357
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G + AL+L+ +M D+ V P + ++L
Sbjct: 358 SLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSIL 395
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ +V A I N M G D ++ +++++ C+ + + DE + ++M +
Sbjct: 296 VKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKV--DEAMNLFKKMHCKNIIPNV 353
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA------ 260
V YT++I L K K+ AL ++++M G+ PDI+ Y+ +L+ + KA
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 413
Query: 261 --EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+++F++L V G DVY Y V I G C + + +++ ME+ G PD TY ++
Sbjct: 414 LKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIII 473
Query: 319 QALCKVRELNRLRELVKEMKWKGIV 343
+L K E + +L++EM +G++
Sbjct: 474 LSLFKKDENDMAEKLLREMIARGLL 498
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 109/231 (47%), Gaps = 13/231 (5%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ ++ ++ SLVK A+ + QM+ GI ++V +++N + +F
Sbjct: 60 IFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFA 119
Query: 266 ELLVLGLVPDVYT-------------YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+L G P+V T Y INGLCK A ++++ ++ +P+V+
Sbjct: 120 NILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVV 179
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
YNT++ ++CKV+ +N +L EM +GI ++ TYS +I G G + +A L +
Sbjct: 180 MYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKM 239
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + F+ + G C+ G +++ + M + + P + +L+
Sbjct: 240 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 290
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 37/286 (12%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT---------- 171
LI + + +D+++LF K+ I + IL DGFC DGK
Sbjct: 219 LISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV----DGFCKDGKMKEGKTVFAMM 274
Query: 172 ------------CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
CSL + C + ++ M + G Y +I K
Sbjct: 275 MKQGIKPNVVTYCSL-MDGYCLVKQVNKAN--SIFNTMAQGGVNPDTQSYNIMINGFCKI 331
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+KV +A+ + +M I P++V YT +++G+ A +L DE+ G+ PD+ TY
Sbjct: 332 KKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITY 391
Query: 280 NVYINGLCKQNNVEAGIKMIA-----CMEEL---GSKPDVITYNTLLQALCKVRELNRLR 331
+ ++ LCK + V+ I ++ E+L G DV Y ++Q C N
Sbjct: 392 SSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEAL 451
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L+ +M+ G + + +TY I+I L K + A LL E + +GL
Sbjct: 452 ALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 13/198 (6%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P I + +L ++ Y A L ++ + G+ ++ T N+ IN + +
Sbjct: 58 PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117
Query: 299 IACMEELGSKPDVITYNTLLQ-------------ALCKVRELNRLRELVKEMKWKGIVLN 345
A + + G P+VIT TL++ LCKV + +L++ + K + N
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPN 177
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ Y+ +ID + + EA L E +++G+ + I G G ++ A++L
Sbjct: 178 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFN 237
Query: 406 QMADKDVSPGARVWEALL 423
+M +++ P + L+
Sbjct: 238 KMILENIKPDVYTFNILV 255
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 143/288 (49%), Gaps = 6/288 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-DELLGFVQEMKKLGFCF-G 205
N+V E+L ++ G CVD + +++ C+Q+ E+L + MK C
Sbjct: 215 NKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMK----CNPS 270
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I L+K+ K +A + N +K G PD V YT V+ G +A +L+
Sbjct: 271 IYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWF 330
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ GLVP+ YTYNV I G CK + K+ M G +V++Y+T++ L
Sbjct: 331 EMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHG 390
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + L EM KGI +L +Y+ +I GL +G++ +A LL + L +GL S F
Sbjct: 391 KTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFT 450
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
I LC+ G A+ LLK M D+ + P A + +++ K DF
Sbjct: 451 PLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFA 498
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I++ + KVF+ +L Q+ G+ D + ++NG Q+ Y + E+ ++ +
Sbjct: 207 LIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMK 266
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P +YTY INGL K+ + ++ +++ G PD + Y T+++ C + L R
Sbjct: 267 CNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEAR 326
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L EM KG+V N TY++MI G D EA L ++ +G + I GL
Sbjct: 327 KLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGL 386
Query: 392 CQRGLVRKALELLKQMADKDVS 413
G +AL L +M+ K ++
Sbjct: 387 YLHGKTDEALSLFHEMSRKGIA 408
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 149/337 (44%), Gaps = 27/337 (8%)
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
KQ +S +LH C P Y +I L + + + V + ++ R F +
Sbjct: 250 KQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYF-PDRVM 308
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+ +IK + D ++ L+++ MI G + T ++++
Sbjct: 309 YTTVIKGFCDMGLLAEARKLWFE------------------MIQKGLVPNEYTYNVMIYG 350
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
C+ RD + E +M G+ +V Y+ +I L K +AL + ++M GI
Sbjct: 351 YCKVRDFA--EARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIA 408
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
D++ Y ++ G+ + + KA L ++LL+ GL P V ++ I LCK + E +++
Sbjct: 409 RDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRL 468
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRE-LVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M + +P T++ ++ L K + + E L+K + WK + N+QT+ +ID L
Sbjct: 469 LKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWK-LKPNMQTFEHLIDCLK 527
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+ + + +L+ +G + S IC L +
Sbjct: 528 RENRLDDILIVLDLMFREGYRLEKS----RICSLVTK 560
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 6/211 (2%)
Query: 216 LVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L + F +L L+ + S G KPD + + +V VKA + E VP
Sbjct: 71 LKHQNNTFLSLRFLHWLTSHCGFKPDQSSCNALFDA-LVDAGAVKAAKSLLE--YPDFVP 127
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ Y+ L + VE + ++++G P ++N L A KV + + +L
Sbjct: 128 KNDSLEGYVRLLGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLY 187
Query: 335 KEMKWKGIVLNL--QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ M G+ +N+ +T +I ++ + LL + L KGLC +++F+ I G C
Sbjct: 188 ELMIESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFC 247
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + E+L M +P ++ ++
Sbjct: 248 KQKQYDRVSEILHIMIAMKCNPSIYTYQEII 278
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 133/248 (53%), Gaps = 2/248 (0%)
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L S+ +++ SS + +M G + +I L + V A+ ++ +M
Sbjct: 103 LGSIAKKKQYSS--AVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKL 160
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
GI+PD + + ++NG+ + +A LF+E++ G P+V +YN INGLCK N
Sbjct: 161 GIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMA 220
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+++ ME+ KP+V+TYNT++ +LCK R +N E + EM +GI ++ TY+ ++ G
Sbjct: 221 VRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHG 280
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
S G + EA L +E + + + + F+ + GLC+ G+V +A + + M +K P
Sbjct: 281 FCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPN 340
Query: 416 ARVWEALL 423
A + AL+
Sbjct: 341 AYTYNALM 348
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I SL K V +A+ L++M GI PD+V Y +L+G +A LF
Sbjct: 236 VVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFK 295
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ ++PD T+N+ ++GLCK+ V + M E G++P+ TYN L+ C
Sbjct: 296 EMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHN 355
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ +++ M KG NL +Y+I+I+G + EA LL E K L + +
Sbjct: 356 QMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYS 415
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLCQ G R+AL L K+M + P + LL
Sbjct: 416 TLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + N M D F V SL + C R D + + +M KLG + + +
Sbjct: 115 AVSLCNQM--DLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTL 172
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + K+ +A+G+ N+M G +P+++ Y V+NG+ + + A +F ++
Sbjct: 173 INGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG 232
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V TYN I+ LCK V ++ ++ M + G PDV+TYNT+L C + +LN
Sbjct: 233 KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATR 292
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L KEM + ++ + T++I++DGL +G + EA + E KG + ++ + G C
Sbjct: 293 LFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYC 352
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +A+++L M K +P + L+
Sbjct: 353 LHNQMDEAIKVLGIMIGKGCAPNLSSYNILI 383
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R++ V FA+ ++ M G D T + +++ +C + + E +G EM G
Sbjct: 143 RLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIK--EAVGLFNEMVWSGHEPN 200
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y VI L K A+ + +M+ + KP++V Y +++ + +A E
Sbjct: 201 VISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLS 260
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G+ PDV TYN ++G C + ++ M PD +T+N L+ LCK
Sbjct: 261 EMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEG 320
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ R + + M KG N TY+ ++DG + EA +L + KG S ++
Sbjct: 321 MVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYN 380
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ + +A LL +M++K+++P + L+
Sbjct: 381 ILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLM 418
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + I+ S+C+ R + +E + F+ EM G +V Y ++ ++ +A +
Sbjct: 238 TYNTIIDSLCKDRLV--NEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFK 295
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M + PD V + ++++G+ + +A + + + G P+ YTYN ++G C N
Sbjct: 296 EMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHN 355
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ IK++ M G P++ +YN L+ CK + +N + L+ EM K + + TYS
Sbjct: 356 QMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYS 415
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ GL G EA L +E + GL + + G C+ G + +AL+LLK+M ++
Sbjct: 416 TLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHER 475
Query: 411 DVSPGARVWEALL 423
+ P ++ L+
Sbjct: 476 RIKPNIILYTILI 488
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E L+ M++ G D T + IL C L +E +EM V + +
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQL--NEATRLFKEMVGRNVMPDTVTFNIL 312
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K+ V +A + M G +P+ Y +++G + +A ++ ++ G
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ +YN+ ING CK + ++++ M E PD +TY+TL+Q LC+V
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L KEM G++ +L YSI++DG G + EA LL+E + + ++ I G+
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + A EL +++ + P + ++
Sbjct: 493 IAGKLEVAKELFSKLSADGIRPDIWTYNVMI 523
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL +M +P +V + L + ++ Y A L +++ + G+ +VY+ NV I
Sbjct: 79 DALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLI 138
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N LC+ ++V+ + ++ M +LG +PD IT+NTL+ LC ++ L EM W G
Sbjct: 139 NCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHE 198
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ +Y+ +I+GL G+ I A + + ++ I LC+ LV +A+E
Sbjct: 199 PNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEF 258
Query: 404 LKQMADKDVSPGARVWEALL 423
L +M D+ + P + +L
Sbjct: 259 LSEMVDRGIPPDVVTYNTIL 278
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 2/256 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + + M G + Y +I K +++ +A +L++M + PD V Y+ +
Sbjct: 358 DEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTL 417
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G+ +A LF E+ GL+PD+ Y++ ++G CK +++ +K++ M E
Sbjct: 418 MQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KP++I Y L++ + +L +EL ++ GI ++ TY++MI GL +G EA
Sbjct: 478 KPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYE 537
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ + G S ++ I G Q A++L+ +M K S + ++ LL +
Sbjct: 538 FFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL--DL 595
Query: 428 SKLDFVNTSFIRLVDQ 443
D + + F+R Q
Sbjct: 596 ESHDEIISRFMRGSSQ 611
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 3/215 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A +L+ M D T S ++ +C+ E L +EM G ++
Sbjct: 391 RMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG--RPREALNLFKEMCSSGLLPDLMA 448
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ ++ K + +AL +L +M IKP+I+ YT+++ G+ + A+ELF +L
Sbjct: 449 YSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLS 508
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ PD++TYNV I GL K+ + + ME+ G PD +YN ++Q + ++ +
Sbjct: 509 ADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSS 568
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+L+ EM K + T+ +++D L S +II
Sbjct: 569 TAIQLIDEMVGKRFSADSSTFQMLLD-LESHDEII 602
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 133/293 (45%), Gaps = 4/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M+ D T ++++ +C++ +S + + M + G Y +
Sbjct: 290 ATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVS--ETMTEKGAEPNAYTYNAL 347
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ ++ +A+ +L M G P++ Y +++NG + +A+ L E+ L
Sbjct: 348 MDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY+ + GLC+ + + M G PD++ Y+ LL CK L+ +
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+KEM + I N+ Y+I+I G+ G + A L + G+ ++ I GL
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLL 527
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ GL +A E ++M D P + + ++ + D +++ I+L+D+++
Sbjct: 528 KEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQD--SSTAIQLIDEMV 578
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 124/226 (54%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E G + EMK +V ++ +I + K+ +V +A IL M G++PD+ Y ++
Sbjct: 284 EAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG ++ + V+A ++F+ ++ G +PDV+++++ +NG CK ++ ++ M G
Sbjct: 344 NGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLI 403
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD ++YNTL+ LC+ R EL K+M G NL TYSI++D L+ +G + +A GL
Sbjct: 404 PDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGL 463
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
N GL ++ I G+C+ G + A EL +++ K + P
Sbjct: 464 FRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQP 509
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 154/289 (53%), Gaps = 3/289 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
++G AIE+ + M+ G+ + + S+I+ +C R + E++ ++ MK +G +V
Sbjct: 175 GKIGRAIELFDVMVARGYKPNVHSYSIIIKGLC--RVGKTTEVIKLLEHMKVVGCEPDVV 232
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ L K V +A+ I +MK GI P +V YT +++G+ + +A L +E+
Sbjct: 233 IYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM 292
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
++PD+ ++V I+ +CK+ V ++ M E+G +PDV TYNTL+ C E+
Sbjct: 293 KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEV 352
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
R++ + M KG + ++ ++SI+++G I EA L +E ++GL + ++
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
I GLCQ +A EL K M P + ++LL +SK +++ +
Sbjct: 413 ISGLCQARRPLEAEELFKDMHSNGYPPNLVTY-SILLDCLSKQGYLDQA 460
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 120/229 (52%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M+ G ++ T +I + V +L ++ G++P+++ ++ ++NG ++
Sbjct: 115 KQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIE 174
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A ELFD ++ G P+V++Y++ I GLC+ IK++ M+ +G +PDV+ Y
Sbjct: 175 GKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIY 234
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NT++ LCK R +N + +MK GI+ + TY+ +I GL + G EA GLL E
Sbjct: 235 NTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKG 294
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ F I +C+ G V +A +LK M + V P + L+
Sbjct: 295 GNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
KLG ++ ++ +I + K+ A+ + + M + G KP++ Y++++ G+
Sbjct: 154 KLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTT 213
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+ +L + + V+G PDV YN ++ LCK V + + M+ G P V+TY +L+
Sbjct: 214 EVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLI 273
Query: 319 QALCKVRELNRLRE---LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L R L R +E L+ EMK I+ +L +S++ID + +G++ EA +L+
Sbjct: 274 HGL---RNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEM 330
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G+ + ++ + G C R V +A ++ + M K P
Sbjct: 331 GVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMP 369
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL N M + P IV + + + ++ + Y L ++ + G+ DV + + I
Sbjct: 74 DALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILI 133
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N C+ +V+ G ++ + +LG +P+VIT++TL+ C ++ R EL M +G
Sbjct: 134 NCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYK 193
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ +YSI+I GL G E LLE G +++ + LC+ LV +A+ +
Sbjct: 194 PNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHI 253
Query: 404 LKQMADKDVSPGARVWEALL 423
+M + P + +L+
Sbjct: 254 FCKMKGTGILPTVVTYTSLI 273
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P ++ + L AL +++ + L K+M+ GI ++ + +I+I+ + +
Sbjct: 89 PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSS 426
L + + GL F I G C G + +A+EL M + P + ++ L
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCR 208
Query: 427 VSKLDFVNTSFIRLVDQILNTPCK 450
V K T I+L++ + C+
Sbjct: 209 VGK----TTEVIKLLEHMKVVGCE 228
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 153/289 (52%), Gaps = 4/289 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ + C + T + ++ C+ ++++ + +EM+K G +V Y ++I L
Sbjct: 264 MLANKICPNEVTFNTLIDGFCKDENVAAAK--KAFEEMQKQGLKPNIVTYNSLINGLCNN 321
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A+ + ++M G+KP+IV Y ++NG ++ +A ++FD++ LVP+V T+
Sbjct: 322 GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITF 381
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N I+ CK+ +E G + + M + G P+V TYN L+ LC+ ++L +EL+ EM+
Sbjct: 382 NTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMEN 441
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG+ ++ TY+I+IDGL A LL E N GL ++ + G C G ++
Sbjct: 442 KGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKA 501
Query: 400 ALELLKQMADKDVSPGARVWEALLLS--SVSKLDFVNTSFIRLVDQILN 446
AL + +M + P + L+ ++KL+ N ++++ LN
Sbjct: 502 ALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLN 550
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 13/261 (4%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+C G + + F++EM C V + +I K E V
Sbjct: 243 DGYCKRGSAGKMYKAE-------------AFMKEMLANKICPNEVTFNTLIDGFCKDENV 289
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
A +M+ G+KP+IV Y ++NG+ +A +L+D+++ LGL P++ TYN
Sbjct: 290 AAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNAL 349
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
ING CK+ ++ K+ + + P+VIT+NT++ A CK + L M +GI
Sbjct: 350 INGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ N+ TY+ +I GL K D+ A LL E NKGL ++ I GLC+ R A +
Sbjct: 410 LPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK 469
Query: 403 LLKQMADKDVSPGARVWEALL 423
LL +M + + P + L+
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLM 490
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 160/364 (43%), Gaps = 15/364 (4%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y EP + HF LA + ++ + S LD K E T +F L+ D R
Sbjct: 76 YGLEPTSKVLHF----LANSKRYSKVRSFLDSFVKNEK-HTVSSVFHSLL---LDGGRPG 127
Query: 134 DSVNLFYKIPKFRINRVGF--AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
+ + + + + A E + GF + +C+ +LS++ ++ + E +
Sbjct: 128 ATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYV 187
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+EM K + + I L + K+ A + MK+ GI P++V Y +++G
Sbjct: 188 --YKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGY 245
Query: 252 IVQED---YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+ KAE E+L + P+ T+N I+G CK NV A K M++ G K
Sbjct: 246 CKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+++TYN+L+ LC +L +L +M G+ N+ TY+ +I+G K + EA +
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKV 365
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
++ + L F+ I C+ G++ + L M D+ + P + L+
Sbjct: 366 FDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR 425
Query: 429 KLDF 432
K D
Sbjct: 426 KQDL 429
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 121/244 (49%), Gaps = 2/244 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI++ + M+ G + T + +++ C+++ + E ++ K ++ + +
Sbjct: 327 AIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMK--EATKVFDDVSKQELVPNVITFNTM 384
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K+ + + + + M +GI P++ Y ++ G+ ++D A+EL +E+ GL
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
DV TYN+ I+GLCK + K++ M LG KP+ +TYNTL+ C +L
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ M+ + N+ TY+++I G + A GLL E L KGL + +D +
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEML 564
Query: 393 QRGL 396
++G
Sbjct: 565 EKGF 568
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 140/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A+ + I DGF D T + + +C+ +S L + M + G
Sbjct: 279 KMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVS--HALKVMDLMLQEGHDPD 336
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y VI L K ++ +A GI+NQM G PD + ++ + Q +A +L
Sbjct: 337 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAR 396
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
EL V GL PDVYT+N+ IN LCK + GI++ M+ G PD +TYN L+ LC +
Sbjct: 397 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMG 456
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L +L+ EM+ G + TY+ +ID L K I EA + ++ +G+ + F+
Sbjct: 457 KLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFN 516
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ + A EL++QM + + P + ++L
Sbjct: 517 TLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSIL 554
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 200/450 (44%), Gaps = 42/450 (9%)
Query: 2 VRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQP 61
R AL R R HR PL Y DQ + +++ Q P+
Sbjct: 29 ARPPAL-RPQPRRRGHRPAPLRVYAIS-----DQDRLLAALRE----------QSDPEAA 72
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
L L + + + P Y +++ L F D+ L +RE + +
Sbjct: 73 --LRMLNSALAREDFAPSSAVYEEIVQKLGTAGAF-DLMEGLVREMRREGHQVRAVVVRS 129
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSL--ILSSV 179
+++YA RF D+V+L +LN + ND F V T +L+ +
Sbjct: 130 FVESYARLRRFDDAVDL-----------------VLNQLDNDTFGVQADTVVFNHLLNVL 172
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
E L L EM G +V +I++L + +V A+ +L +M S G+ P
Sbjct: 173 VEGSKLKL--LESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAP 230
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D +T ++ G I + A + +++ G P T NV ING CK VE + I
Sbjct: 231 DETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYI 290
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
G +PD +TYNT + LC+ ++ +++ M +G ++ TY+ +I+ L+
Sbjct: 291 QQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN 350
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
G++ EA G++ + +++G ++ F+ I L + + +AL+L +++ K +SP +
Sbjct: 351 GELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTF 410
Query: 420 EALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+L++++ K+ + IRL +++ ++ C
Sbjct: 411 N-ILINALCKVGDPHLG-IRLFEEMKSSGC 438
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 147/299 (49%), Gaps = 6/299 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG--FVQEMKKLGFCFG 205
NR+ A+++ + G D T +++++++C+ D LG +EMK G
Sbjct: 386 NRLEEALDLARELTVKGLSPDVYTFNILINALCK----VGDPHLGIRLFEEMKSSGCTPD 441
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I L K+ +AL +LN+M+S+G V Y +++ + + +AEE+FD
Sbjct: 442 EVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFD 501
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ T+N I+GLCK ++ ++I M + G +P+ ITYN++L CK
Sbjct: 502 QMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQG 561
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + ++++ M G +++ TY +I+GL G A LL KG+ ++
Sbjct: 562 NIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYN 621
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
I L +R +R AL L ++M + P A ++ + S + +F LV+ +
Sbjct: 622 PVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMV 680
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 2/262 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++V A+ +L M + G D T + ++ E+ + + L +M + G
Sbjct: 209 RAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEA--ALRVKAKMMEAGCSPT 266
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +I K +V DALG + Q +DG +PD V Y ++G+ A ++ D
Sbjct: 267 GVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMD 326
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L G PDV+TYN IN L K ++ ++ M + G PD T+NTL+ AL
Sbjct: 327 LMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQN 386
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L +L +E+ KG+ ++ T++I+I+ L GD L EE + G ++
Sbjct: 387 RLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYN 446
Query: 386 ETICGLCQRGLVRKALELLKQM 407
I LC G + AL+LL +M
Sbjct: 447 ILIDHLCSMGKLGNALDLLNEM 468
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 126/301 (41%), Gaps = 22/301 (7%)
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
PH+ L C P Y+ +I L + + + LD + + E+ P
Sbjct: 423 PHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK---LGNALDLLNEMESNGCPRSTVT 479
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
T DA K RI A E+ + M G T + ++ +C
Sbjct: 480 --YNTIIDA-----------LCKKMRIEE---AEEVFDQMDAQGISRSAVTFNTLIDGLC 523
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ + + D+ +++M K G + Y +++ K+ + A IL M ++G + D
Sbjct: 524 KAKRI--DDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+V Y ++NG+ A +L + + G+ P YN I L ++NN+ + +
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFR 641
Query: 301 CMEELGSKPDVITYNTLLQALCK-VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M E+G PD +TY + ++LC+ + + + EM KG + ++ ++ +GL +
Sbjct: 642 EMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 701
Query: 360 G 360
G
Sbjct: 702 G 702
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 146/285 (51%), Gaps = 3/285 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +I + M++ G D + S ++ R+ D+ L + ++MK G V YT +
Sbjct: 309 AKDIFSDMLHRGVSPDLISFSSLIG--VSSRNGHLDQALMYFRDMKTSGLVPDNVIYTIL 366
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + +AL I ++M G D+V Y +LNG+ ++ A LFDE++ G+
Sbjct: 367 INGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGV 426
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPD T+ I+G CK+ N+ + + M + KPD++TYN L+ CK E+ + E
Sbjct: 427 VPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANE 486
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM + I N +Y+I+++G + G + EA L +E + KG+ + I G C
Sbjct: 487 LWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYC 546
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+ G + KA E L +M + V P + + L++ K ++++ +F
Sbjct: 547 RSGDLSKADEFLGKMISEGVGPDSITYNT-LINGFVKGEYMDKAF 590
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 158/315 (50%), Gaps = 19/315 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNC 159
+F LI++Y A + + + F + + ++ V A E+ N
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE 175
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
+ G ++ T +++++++C +D D++ F+ +M++ G +V Y +I + ++
Sbjct: 176 IARSGIELNVYTLNIMVNALC--KDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A ++N M G+KP + Y V+NG+ + YV+A+ +F+E+L +GL PD TY
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + C+ NN + + M G PD+I++++L+ + L++ ++MK
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+V + Y+I+I+G G + EA + ++ L +G ++ + GLC++ L+
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLAD 413
Query: 400 ALELLKQMADKDVSP 414
A L +M ++ V P
Sbjct: 414 ANALFDEMVERGVVP 428
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 150/293 (51%), Gaps = 4/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+EI + M+ G +D + IL+ +C+++ L+ L EM + G +T +
Sbjct: 379 ALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANAL--FDEMVERGVVPDFCTFTTL 436
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ + AL + M IKPDIV Y ++++G + KA EL++E++ +
Sbjct: 437 IHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKI 496
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +Y + +NG C V ++ M G KP ++T NT+++ C+ +L++ E
Sbjct: 497 FPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADE 556
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M +G+ + TY+ +I+G + +A L+ + KGL ++ + G C
Sbjct: 557 FLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFC 616
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
++G +++A +L++M ++ + P + L+ VS+ D + +F R D++L
Sbjct: 617 RQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQ-DNLKEAF-RFHDEML 667
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 39/322 (12%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G D T + ++++ C + L E + M G + Y VI L KK +
Sbjct: 215 GIFADIVTYNTLINAYCREGLLG--EAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYV 272
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL--------------- 268
A G+ N+M S G+ PD Y +L ++++A+++F ++L
Sbjct: 273 RAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI 332
Query: 269 --------------------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
GLVPD Y + ING C+ + +++ M E G
Sbjct: 333 GVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCA 392
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
DV+ YNT+L LCK + L L EM +G+V + T++ +I G +G++ +A L
Sbjct: 393 LDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSL 452
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
K + ++ I G C+ + KA EL +M + + P + A+L++
Sbjct: 453 FGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPN-HISYAILVNGYC 511
Query: 429 KLDFVNTSFIRLVDQILNTPCK 450
L FV+ +F RL D+++ K
Sbjct: 512 NLGFVSEAF-RLWDEMIRKGIK 532
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+IRS V+ K+ + ++ G I +L G++ A E+++E+ G
Sbjct: 121 LIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSG 180
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ +VYT N+ +N LCK + ++ + ME+ G D++TYNTL+ A C+ L
Sbjct: 181 IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAF 240
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E++ M KG+ L TY+ +I+GL KG + A G+ E L+ GL ++ ++ +
Sbjct: 241 EVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVES 300
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ +A ++ M + VSP + +L+
Sbjct: 301 CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI 332
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 133/297 (44%), Gaps = 23/297 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFY 140
AY+ ++ L + D +++ D + +R P+F F LI + +++LF
Sbjct: 397 AYNTILNGLCKKKLLADANALFDEMVERG--VVPDFCTFTTLIHGHCKEGNMGKALSLFG 454
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+ + I I N +I DGFC KT + ++EL EM
Sbjct: 455 IMTQKNIKP---DIVTYNILI-DGFC---KTTEM----------EKANELW---NEMISR 494
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
+ Y ++ V +A + ++M GIKP +V V+ G D KA
Sbjct: 495 KIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKA 554
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+E +++ G+ PD TYN ING K ++ +I ME G +PDV+TYN +L
Sbjct: 555 DEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNG 614
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
C+ + ++++M +GI + TY+ +I+G S+ ++ EA +E L +G
Sbjct: 615 FCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGF 671
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A + + MI G TC+ ++ C DLS +DE LG +M G + Y
Sbjct: 519 AFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLG---KMISEGVGPDSITYNT 575
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I VK E + A ++N+M++ G++PD+V Y ++LNG Q +AE + +++ G
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ PD TY ING Q+N++ + M + G PD
Sbjct: 636 IDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 153/357 (42%), Gaps = 30/357 (8%)
Query: 85 FVIKTLAENSQFCDISSVLDHIEKRENFETP---------------EFIFIDLIKTYADA 129
+VI T+ S+ C ++ ++ EN + P E I ++L + +
Sbjct: 23 YVIATIRNPSEEC----IIRYLHTLENCQNPNQEPTSSAPPDSFLVEKILLNLRR--VRS 76
Query: 130 HRFQDSVNLFYKIPKFRINRVGFA-IEILNCMIN-DGFC-VDGKTCSLILSSVCEQRDLS 186
R D+ L ++ I R G + +EI+ +I+ C VD L++ S + R L
Sbjct: 77 KRLSDAQTLILRM----IRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKL- 131
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+E + +++ GF + +++ LVK V A + N++ GI+ ++ +
Sbjct: 132 -NEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNI 190
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++N + + ++ G+ D+ TYN IN C++ + +++ M G
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KP + TYN ++ LCK R + + EM G+ + TY+ ++ + +EA
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + L++G+ F I + G + +AL + M + P ++ L+
Sbjct: 311 DIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILI 367
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 143/284 (50%), Gaps = 11/284 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL----- 200
+ RV A+ +L MI G+C D T S++++ +C+ + E F+Q M +
Sbjct: 61 KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQ--EAQEFLQGMNRTISTRA 118
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVK 259
CF Y +++ SL K +KV A I + M S+ + PD+V Y+++++G ++ +
Sbjct: 119 SSCF---SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGR 175
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
AE+L+ +++ L VP+V TYN ++NGL ++ + + M G PDVITY+TL+
Sbjct: 176 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIH 235
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
R+ ++ EL + M +G N TY+ ++ GL + EA L + + +G
Sbjct: 236 GFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDP 295
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G C G + +A+E+ +M K P + LL
Sbjct: 296 DKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 339
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 139/282 (49%), Gaps = 4/282 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+ +V A I + M+++ V D + S+++ C+ +L E L ++M L
Sbjct: 133 KAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKL--YKQMIDLNCVP 190
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y + L++K ++ DA G+ +M S G PD++ Y+ +++G + + +A ELF
Sbjct: 191 NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ ++ G P+ TYN ++GLCK++ + ++ M E G PD +TY TLL C V
Sbjct: 251 EAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNV 310
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ + E+ EM KG ++ Y+ ++ G G EA L + +++ +
Sbjct: 311 GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSH 370
Query: 385 DETICGLCQRGLVRKALELLKQMA-DKDVSPGARVWEALLLS 425
+ I GL + + A+E+ ++M D SP + +L+
Sbjct: 371 NIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 412
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 11/241 (4%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL--L 268
+VI+ L K +V AL +L M G PD+ ++M++N + + +A+E +
Sbjct: 54 SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-EELGSKPDVITYNTLLQALCKVREL 327
+ ++YN +N LCK V + + M E PDV++Y+ L+ CK+ EL
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
R +L K+M V N+ TY+ ++GL KG I +A G+ EE ++ G +
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233
Query: 388 ICGLCQRGLVRK---ALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
I G L RK A EL + M + P A + LL L SK D + F ++V+
Sbjct: 234 IHGF---SLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290
Query: 443 Q 443
+
Sbjct: 291 R 291
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 104/209 (49%), Gaps = 3/209 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ MI+ G + T + +L +C++ DE ++M + G V YT +
Sbjct: 246 AHELFEAMISRGCRPNAVTYNCLLHGLCKES--KPDEAHELFRKMVERGCDPDKVTYTTL 303
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K+ A+ + ++M S G PD+V Y +L G +A +LF ++
Sbjct: 304 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC 363
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEE-LGSKPDVITYNTLLQALCKVRELNRLR 331
PD ++N+ I+GL K ++ +++ ME+ G PD++TYN+L+ LC + L+
Sbjct: 364 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 423
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
++ KE+ + + ++++++ + + G
Sbjct: 424 KVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
T + I LCK V++ + ++ M + G PD+ T++ L+ LCK ++ +E ++ M
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110
Query: 338 KW--KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN-KGLCTQSSMFDETICGLCQR 394
+ +Y+ +++ L + +A + ++ + + + I G C+
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
+ +A +L KQM D + P + A L
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFL 199
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 167/348 (47%), Gaps = 25/348 (7%)
Query: 85 FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI-- 142
F++ ++S +++LD R F+F L+ Y D+ D++ F +
Sbjct: 126 FLVSRKGKDSAASVFAAILDTAGTR----CSNFVFDALMIAYWDSGFVSDAIQCFRLVRN 181
Query: 143 PKFRINRVGFAIEILNCMIND----------------GFCVDGKTCSLILSSVCEQRDLS 186
F+I G +L+ MIN GF + +++++ C++ +
Sbjct: 182 SNFQIPFHGCGY-LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIR 240
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+L+ E++K G V + +I L K + + + M+ + I PD+ Y++
Sbjct: 241 DAKLI--FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSV 298
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ + AE+LFDE+ GL P+ T+ I+G + +++ + M +G
Sbjct: 299 LIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMG 358
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KPD++ YNTLL LCKV ++N+ R+LV EMK G+ + TY+ +IDG +GD+ A
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAM 418
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ + +G+ + F I G C+ G VR A L++M + + P
Sbjct: 419 EIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 129/249 (51%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+++ +C+ R+L DE + M++ + Y+ +I L K+ ++ A + ++M+
Sbjct: 264 LINGLCKSRNL--DEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ 321
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G++P+ + +T +++G A + ++L +G+ PD+ YN +NGLCK +V
Sbjct: 322 RGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNK 381
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
K++ M+ +G KPD ITY TL+ CK +L E+ K M +G+VL+ ++ +I
Sbjct: 382 ARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALIS 441
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G G + +A L E + G+ + + I G C++G V+ +LLK+M P
Sbjct: 442 GFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501
Query: 415 GARVWEALL 423
G + L+
Sbjct: 502 GVITYNVLM 510
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S+++ +C++ L E L EM++ G + +T +I + ++ A+ +
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQL--FDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYH 352
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM + G+KPD+V Y +LNG+ D KA +L DE+ ++G+ PD TY I+G CK+
Sbjct: 353 QMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEG 412
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++E+ +++ M E G D + + L+ C+ + ++EM G+ + TY+
Sbjct: 413 DLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYT 472
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++IDG KG++ LL+E G ++ + GLC++G ++ A LL+ M +
Sbjct: 473 MVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNL 532
Query: 411 DVSPGARVWEALL 423
V+P + LL
Sbjct: 533 GVTPDDITYNILL 545
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 157/356 (44%), Gaps = 21/356 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L + C P +++ +I L + S+ V +E R+ + + LI
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD-IPPDSWSYGILIDGL 195
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A A + ++ LF + M++ G T ++++ +C L
Sbjct: 196 AKAGKLNEAYKLFRR------------------MLDSGITPSAVTYNVVIHGMCLAYTL- 236
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE L + M+ G + +I + K+ K+ +A +L +M DG PD+V Y+
Sbjct: 237 -DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ A L ++++ P V T N I+GLCK ++ +++ M G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PDV+TYNTL+ C+ + R REL+ +M +G+ N+ TY+ ++ GL + EAC
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
G+ + + G + I G C G V L+L +M +SP V+ L
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 160/351 (45%), Gaps = 25/351 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKR-ENFETPEFI-FIDLIKTYADAHRF 132
C P P Y+ +I + + D I+K E+ P+ + + ++ + R
Sbjct: 75 GCPPSPVTYNVIIDASCKRGM---LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRV 131
Query: 133 QDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG 192
++++ LF ++ E L C N ++ + I+ +C+Q + D+
Sbjct: 132 EEALLLFNEM------------ERLGCTPNR------RSHNTIILGLCQQSKI--DQACQ 171
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
EM+ Y +I L K K+ +A + +M GI P V Y +V++G+
Sbjct: 172 VFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMC 231
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ +A ELF + G P +T+N+ I+ CK+ ++ +++ M + G PDV+
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVV 291
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY+TL+ LC + ++ R L+++M + + T + +I GL G I EA +L+
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ G ++ + G C+ G +A ELL M + ++P + AL+
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 111/220 (50%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
Q++ G V YT++I L DA + M G P V Y ++++ +
Sbjct: 34 QKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKR 93
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A +L +++ G VPDV TYN ++GLCK VE + + ME LG P+ ++
Sbjct: 94 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSH 153
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NT++ LC+ ++++ ++ EM+ + I + +Y I+IDGLA G + EA L L+
Sbjct: 154 NTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLD 213
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G+ + ++ I G+C + +ALEL K M K P
Sbjct: 214 SGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRP 253
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 109/215 (50%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K+ DA + ++ G+ P V YT +++G+ + + A ELF ++
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P TYNV I+ CK+ +E +I M E G PDV+TYNT++ LCK +
Sbjct: 73 RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L EM+ G N ++++ +I GL + I +AC + E + + S + I
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + G + +A +L ++M D ++P A + ++
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 22/312 (7%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
LI A A + D+ +LF K+ + A L G C + +S +
Sbjct: 16 LIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLI----HGLC--------MANSFDD 63
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
R+L +D M + G V Y +I + K+ + +A ++ +M DG PD+
Sbjct: 64 ARELFAD--------MNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDV 115
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V Y V++G+ +A LF+E+ LG P+ ++N I GLC+Q+ ++ ++
Sbjct: 116 VTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE 175
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
ME PD +Y L+ L K +LN +L + M GI + TY+++I G+
Sbjct: 176 MEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ EA L + +KG F+ I C+RG + +A LLK+M D P +
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 422 LL--LSSVSKLD 431
L+ L S++++D
Sbjct: 296 LISGLCSIARVD 307
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 2/214 (0%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M + PD Y ++++G+ A +LF +LL G+ P Y I+GLC N+
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ ++ A M G P +TYN ++ A CK L +L+K+M G V ++ TY+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
++DGL G + EA L E G + I GLCQ+ + +A ++ +M +D
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 412 VSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ P + + L+ L+ KL+ F R++D
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDS 214
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 39/302 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +L M +DG D T S ++S +C + D+ +++M K +V +
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV--DDARHLLEDMVKRQCKPTVVTQNTL 331
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K ++ +A +L+ M S G PD+V Y +++G +A EL +++ GL
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391
Query: 273 VPDVYTYNVYINGLCKQNN-----------------------------------VEAGIK 297
P+V TY ++GLCK N V+ G+K
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 451
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK--WKGIVLNLQTYSIMIDG 355
+ M G PD + Y TL LCK R E+++E + + + Y +DG
Sbjct: 452 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDG 511
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L G + A G + + + G + GLC+ G +A +L+++ D
Sbjct: 512 LLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGK 571
Query: 416 AR 417
AR
Sbjct: 572 AR 573
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 122/230 (53%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ MK GF +V Y +I SL + K+ AL +L+Q+ D P ++ YT+++ IV
Sbjct: 170 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIV 229
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ +A +L +E+L GL+PD+YTYN I G+CK+ VE ++I + G +PDVI+
Sbjct: 230 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVIS 289
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN LL+A + + +LV EM +G N TYSI+I L G I EA +L+ +
Sbjct: 290 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 349
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
K L + +D I LC+ G + A+ ++ M P + +L
Sbjct: 350 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTIL 399
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 157/368 (42%), Gaps = 70/368 (19%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS------------------- 186
++N++ A ++LN M GF D T ++++ S+C +R L
Sbjct: 159 KVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVI 218
Query: 187 --------------SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+E + ++EM G M Y +IR + K+ V A ++ +
Sbjct: 219 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL 278
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG--------------------- 271
S G +PD++ Y ++L + Q + + E+L E+ G
Sbjct: 279 TSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRI 338
Query: 272 --------------LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
L PD Y+Y+ I+ LCK+ ++ I ++ M G PD++ YNT+
Sbjct: 339 DEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI 398
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L ALCK N+ E+ +++ G N+ +Y+ MI L S GD A G++ ++KG+
Sbjct: 399 LAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGI 458
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS--SVSKLDFVNT 435
++ I LC+ GLV +A+ LL M P + +LL V ++D
Sbjct: 459 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 518
Query: 436 SFIRLVDQ 443
F ++++
Sbjct: 519 MFAEMIEK 526
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ AI +L MI D + ++S++C++ L D +G + M G
Sbjct: 334 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL--DLAIGIMDYMISNGCLPD 391
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V+Y ++ +L K AL I N+++ G P++ Y +++ + D +A +
Sbjct: 392 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 451
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ PD TYN I+ LC+ VE I ++ ME+ G +P VI+YN +L LCKVR
Sbjct: 452 AMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 511
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
++ + EM KG N TY ++I+G+ G EA L ++ + +Q S
Sbjct: 512 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 568
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 142/299 (47%), Gaps = 9/299 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
++ L C++N G+ D C+ ++ +++ + + E F Y V
Sbjct: 97 SLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFA---YNAV 153
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K ++ A +LN+MK+ G PDIV Y +++ + + A + D+LL+
Sbjct: 154 ISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNC 213
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P V TY + I + + +K++ M G PD+ TYN +++ +CK + R E
Sbjct: 214 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 273
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ + KG ++ +Y+I++ ++G E L+ E ++G + I LC
Sbjct: 274 LITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLC 333
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPC 449
+ G + +A+ +LK M +K+++P ++ L+ L +LD I ++D +++ C
Sbjct: 334 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA----IGIMDYMISNGC 388
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 122/242 (50%), Gaps = 2/242 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S+++SS+C R DE + ++ M + Y +I +L K+ ++ A+GI++
Sbjct: 324 TYSILISSLC--RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMD 381
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M S+G PDIV Y +L + + +A E+F++L +G P+V +YN I+ L
Sbjct: 382 YMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCG 441
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + M+ M G PD ITYN+L+ LC+ + L+ +M+ G + +Y+
Sbjct: 442 DRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYN 501
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ GL I +A G+ E + KG + + I G+ G +A+EL + +
Sbjct: 502 IVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561
Query: 411 DV 412
DV
Sbjct: 562 DV 563
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++ + + G D + +++L + Q E L V EM G V Y+ +
Sbjct: 271 AAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKL--VAEMFSRGCEPNKVTYSIL 328
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL + ++ +A+ +L M + PD Y +++ + + A + D ++ G
Sbjct: 329 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD+ YN + LCK N +++ + +G P+V +YNT++ AL + +R
Sbjct: 389 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 448
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+V M KGI + TY+ +I L G + EA GLL++ G ++ + GLC
Sbjct: 449 MVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 508
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + A+ + +M +K P + L+
Sbjct: 509 KVRRIDDAIGMFAEMIEKGCRPNETTYILLI 539
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 169/380 (44%), Gaps = 54/380 (14%)
Query: 79 PPEAYHFVI--KTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P AY F I K S+ S I K F F L+ R +++
Sbjct: 113 PCNAYSFTILMKCFCSCSKLPFALSTFGKITKL-GFHPTVVTFNTLLHGLCVEDRISEAL 171
Query: 137 NLFYKIPK-------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+LF+++ K R RV A+ +L+ M+ DG + T I+ +C+
Sbjct: 172 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 231
Query: 184 DLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
D S L +++M+++ +V Y +I L K + DA + +M+ I PDIV
Sbjct: 232 DTVS--ALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289
Query: 243 CYTMVLNGV-----------IVQE------------------------DYVKAEELFDEL 267
Y ++NG ++QE + +AEEL+DE+
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEM 349
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L ++P TY+ I+G CKQN ++A M G PD+IT+NTL+ C+ + +
Sbjct: 350 LPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRV 409
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ +L+ EM G+V N TY+ +I G GD+ A LL+E ++ G+C +
Sbjct: 410 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTL 469
Query: 388 ICGLCQRGLVRKALELLKQM 407
+ GLC G ++ ALE+ K M
Sbjct: 470 LDGLCDNGKLKDALEMFKAM 489
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 165/358 (46%), Gaps = 31/358 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P + +I + +F + + D + R + + +I + +R + +
Sbjct: 321 PDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST-VTYSSMIDGFCKQNRLDAAEH 379
Query: 138 LFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+FY P R RV I++L+ M G + T + ++ C
Sbjct: 380 MFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 439
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS------ 234
+ DL++ + L +QEM G C +V ++ L K+ DAL + M+
Sbjct: 440 QVGDLNAAQDL--LQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 497
Query: 235 -----DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+G++PD+ Y +++ G+I + +++AEEL++E+ G+VPD TY+ I+GLCKQ
Sbjct: 498 ASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ ++ +M M PDV+T+NTL+ CK ++ EL EM +GIV + TY
Sbjct: 558 SRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITY 617
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+I G +I A + +E ++ G+ + + GL + + +A+ +L+ +
Sbjct: 618 ITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 152/321 (47%), Gaps = 35/321 (10%)
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
R D+ NLF ++ + I I NCMIN GFC+ G+ S EQ
Sbjct: 268 RHSDAHNLFIEMQEKEIFP---DIVTYNCMIN-GFCISGRW------SDAEQ-------- 309
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+QEM + +V ++ +I + VK+ K F+A + ++M I P V Y+ +++G
Sbjct: 310 --LLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDG 367
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
Q AE +F G PD+ T+N I G C+ V+ GIK++ M E G +
Sbjct: 368 FCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 427
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
ITY TL+ C+V +LN ++L++EM G+ N+ T + ++DGL G + +A +
Sbjct: 428 TITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMF- 486
Query: 371 EALNK------------GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+A+ K G+ ++ ICGL G +A EL ++M + + P
Sbjct: 487 KAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546
Query: 419 WEALL--LSSVSKLDFVNTSF 437
+ +++ L S+LD F
Sbjct: 547 YSSMIDGLCKQSRLDEATQMF 567
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 174/371 (46%), Gaps = 35/371 (9%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQDSVNLFYK 141
Y+ +I L ++ + D ++ ++++E F P+ + + +I + + R+ D+ L +
Sbjct: 256 YNTIIDGLWKDGRHSDAHNLFIEMQEKEIF--PDIVTYNCMINGFCISGRWSDAEQLLQE 313
Query: 142 IPKFRINR--VGFAIEILNCMINDGFCVDGK----------------TCSLILSSVCEQR 183
+ + +IN V F+ ++N + +G + + T S ++ C+Q
Sbjct: 314 MLERKINPDVVTFS-ALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQN 372
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
L + E + ++ K G ++ + +I + ++V D + +L++M G+ + +
Sbjct: 373 RLDAAEHMFYLTPTK--GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT +++G D A++L E++ G+ P+V T N ++GLC ++ ++M M+
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 304 EL-----------GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ G +PDV TYN L+ L + EL +EM +GIV + TYS M
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDGL + + EA + + +K F+ I G C+ G+V LEL +M + +
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610
Query: 413 SPGARVWEALL 423
A + L+
Sbjct: 611 VADAITYITLI 621
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 131/277 (47%), Gaps = 7/277 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+++ FA+ + GF T + +L +C + +S E L +M K +V
Sbjct: 130 SKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRIS--EALDLFHQMCKPN----VV 183
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+T ++ L ++ +V +A+ +L++M DG++P+ + Y +++G+ D V A L ++
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 243
Query: 268 L-VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
V ++P+V YN I+GL K + M+E PD++TYN ++ C
Sbjct: 244 EEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGR 303
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ +L++EM + I ++ T+S +I+ +G EA L +E L + + + +
Sbjct: 304 WSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSS 363
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C++ + A + K SP + L+
Sbjct: 364 MIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLI 400
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 127/259 (49%), Gaps = 7/259 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ ++M+ L +T +++ K+ AL ++ G P +V + +
Sbjct: 98 DVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTL 157
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ V++ +A +LF ++ P+V T+ +NGLC++ V + ++ M E G
Sbjct: 158 LHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGL 213
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMK-WKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P+ ITY T++ +CK+ + L+++M+ I+ N+ Y+ +IDGL G +A
Sbjct: 214 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAH 273
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
L E K + ++ I G C G A +LL++M ++ ++P + AL+ +
Sbjct: 274 NLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAF 333
Query: 427 VSKLDFVNTSFIRLVDQIL 445
V + F L D++L
Sbjct: 334 VKEGKFFEAE--ELYDEML 350
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 115/287 (40%), Gaps = 62/287 (21%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIE 155
+P+ I F LI Y A R D + L +++ + ++ + A +
Sbjct: 390 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQD 449
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMK---KLGFCFGMVD--- 208
+L MI+ G C + TC+ +L +C+ L E+ +Q+ K F V+
Sbjct: 450 LLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDV 509
Query: 209 --YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y +I L+ + K +A + +M GI PD + Y+ +++G+ Q +A ++FD
Sbjct: 510 QTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 569
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG-------------------- 306
+ PDV T+N I G CK V+ G+++ M + G
Sbjct: 570 MGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDN 629
Query: 307 ---------------SKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
PD IT +L L EL R ++++++
Sbjct: 630 IDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 125/228 (54%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
E++ GF Y I++ VK + + + L+ M+ G++P++ Y +++ G+ ++
Sbjct: 166 EIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREK 225
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
AE++FDE+ + LV + TYN I+G CK ++A KM M+E P++IT+N
Sbjct: 226 RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+LL LCK+R++ R L+KEM+ G + + TYSI+ DGL D A L E+A K
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK 345
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + + GLC++G V KA E+LK+ + + ++ +
Sbjct: 346 GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFV 393
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 163/345 (47%), Gaps = 28/345 (8%)
Query: 103 LDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMIN 162
LD + KR FI+ LI R +D+ +F ++ IN VG +I N +I
Sbjct: 199 LDSMRKR-GVRPNVFIYNVLIGGLCREKRIRDAEKMFDEM--CNINLVG-SIVTYNTLI- 253
Query: 163 DGFCVDGK---------------------TCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
DG+C G+ T + +LS +C+ R + E ++EM+ G
Sbjct: 254 DGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMK--EARSLLKEMEVNG 311
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
F Y+ + L++ + A+ + Q GI+ + +++LNG+ Q KAE
Sbjct: 312 FMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAE 371
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
E+ + GLV D YN ++NG C+ ++ I I ME G +P+ IT+N+L+
Sbjct: 372 EILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKF 431
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C ++E+++ E VK+M KG+ +++TY+ +IDG +LE+ G+
Sbjct: 432 CDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNV 491
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
+ I LC+ G + +A +L+ M + V P A+V+ L+ S
Sbjct: 492 VSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGS 536
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 138/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ G ++ T S++L+ +C+Q + E + +++ + G V Y
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEI--LKKFTENGLVADEVIYNTF 392
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + + A+ + +M+S G++P+ + + +++ ++ KAEE ++ G+
Sbjct: 393 VNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V TYN I+G K + +++ MEE+G KP+V++Y +L+ LCK ++
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEI 512
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++++M +G++ N Q Y+++IDG G + +A +E + + ++ I GLC
Sbjct: 513 VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLC 572
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
++G + +A + L Q+ SP + +L+
Sbjct: 573 KKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 25/331 (7%)
Query: 98 DISSVLDHIEKRENF--ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
D++ + IE+ E+F F LI + D + K+ + V ++E
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAE---KGVTPSVE 457
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
N +I DG+ GK C+ D +++M+++G +V Y ++I
Sbjct: 458 TYNTLI-DGY---GKLCTF-------------DRCFQILEQMEEIGVKPNVVSYGSLINC 500
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K K+ +A +L M G+ P+ Y M+++G + A FDE++ + P
Sbjct: 501 LCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPT 560
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ TYNV I+GLCK+ + + + G PDVITYN+L+ +++ L +
Sbjct: 561 LVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYE 620
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKG-DIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
MK GI ++TY +I G + +G +++E L E L L +++ I +
Sbjct: 621 TMKNLGIKPTVRTYHPLISGCSKEGIELVEK--LYNEMLQMNLLPDRVVYNAMIHCYAEI 678
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALLLS 425
G +KA L + M D+ + P + +L+L
Sbjct: 679 GNTQKAYSLHQGMLDQGIHPDKMTYNSLILG 709
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 3/242 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +C++ L+ E F+ ++ G ++ Y ++I V LG+
Sbjct: 563 TYNVLIDGLCKKGKLTEAE--DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYE 620
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
MK+ GIKP + Y +++G +E E+L++E+L + L+PD YN I+ +
Sbjct: 621 TMKNLGIKPTVRTYHPLISGC-SKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIG 679
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N + + M + G PD +TYN+L+ + +L+ +++LV MK K + TY
Sbjct: 680 NTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYD 739
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ G D A E + +S+ +E GL Q G +++ + +M K
Sbjct: 740 ILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVK 799
Query: 411 DV 412
+
Sbjct: 800 GI 801
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 17/263 (6%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ DG C+ GK + L F EM + +V Y +I L KK
Sbjct: 531 MLIDGSCMVGKV----------------KDALRFFDEMMRSEISPTLVTYNVLIDGLCKK 574
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A L Q+ S G PD++ Y +++G + K L++ + LG+ P V TY
Sbjct: 575 GKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTY 634
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+G C + +E K+ M ++ PD + YN ++ ++ + L + M
Sbjct: 635 HPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLD 693
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+GI + TY+ +I G +G + L+ K L ++ +D + G C
Sbjct: 694 QGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSG 753
Query: 400 ALELLKQMADKDVSPGARVWEAL 422
A ++M + + P A + L
Sbjct: 754 AYVWYREMVENNFLPNASICNEL 776
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%)
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K + + +A+ + M+ DG P +V +++ + ++ ++ +VK +LF E+ G D +
Sbjct: 118 KSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTF 177
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
Y I K N++ G++ + M + G +P+V YN L+ LC+ + + ++ EM
Sbjct: 178 MYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEM 237
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+V ++ TY+ +IDG G++ A + E K + F+ + GLC+ +
Sbjct: 238 CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKM 297
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
++A LLK+M P + L
Sbjct: 298 KEARSLLKEMEVNGFMPDGYTYSILF 323
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 161/350 (46%), Gaps = 13/350 (3%)
Query: 81 EAYHFVIKTLAENSQFCD-ISSVLDHIEKRENFETPEFIFID---LIKTYADAHRFQDSV 136
E V ++L E C+ SSV D + K ID I + AH F V
Sbjct: 114 EDASLVFRSLQETYDLCNSTSSVFDLVVK----SYSRLCLIDKALSIVHLSQAHGFMPGV 169
Query: 137 NLFYKI--PKFRINR-VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+ + R R + FA + M+ + T ++++ C +L D L F
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNL--DVALRF 227
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
M+K G +V Y +I K K+ D +L M G++P+++ Y +V+NG+
Sbjct: 228 FDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCR 287
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ + + E+ G D TYN I G CK+ N + M A M G P VIT
Sbjct: 288 EGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVIT 347
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y +L+ ++CK +NR E + +M+ +G+ N +TY+ ++DG + KG + EA +L+E +
Sbjct: 348 YTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMI 407
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++ I G C G + A+ +L+ M +K ++P + +L
Sbjct: 408 DNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVL 457
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 164/357 (45%), Gaps = 21/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S ++ EP +Y+ VI L + +IS VL + KR + E + LIK Y
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKR-GYSLDEVTYNTLIKGY 320
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
F ++ + + M+ G T + ++ S+C+ ++
Sbjct: 321 CKEGNFHQALVMHAE------------------MLRHGLSPSVITYTSLIHSMCKAGNM- 361
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ F+ +M+ G C YT ++ +K + +A +L +M +G P +V Y
Sbjct: 362 -NRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNA 420
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG + V A + +++ GL PDV +Y+ ++G C+ +V+ +++ M G
Sbjct: 421 LINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG 480
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KPD ITY++L+Q C+ R +L EM G+ + TY+ +I+ +GD+ +A
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAI 540
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E + KG+ + I GL ++ R+A LL ++ ++ P + L+
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI 597
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 118/215 (54%), Gaps = 1/215 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVL 270
V++S + + AL I++ ++ G P ++ Y VL+ I + + AE +F E+L
Sbjct: 140 VVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQS 199
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
+ P+V+TYN+ I G C N++ ++ ME+ G P+V+TYNTL+ CK+R+++
Sbjct: 200 QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL++ M KG+ NL +Y+++I+GL +G + E +L E +G ++ I G
Sbjct: 260 FELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKG 319
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C+ G +AL + +M +SP + +L+ S
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHS 354
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 128/315 (40%), Gaps = 52/315 (16%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI +L M G D + S +LS C D+ DE L ++M G + Y+++
Sbjct: 434 AIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDV--DEALRVKRKMVAKGIKPDTITYSSL 491
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ ++ + +A + ++M G+ PD YT ++N ++ D KA +L +E++ G+
Sbjct: 492 IQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGV 551
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIA-------------------------------- 300
+PDV TY+V INGL KQ +++
Sbjct: 552 LPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 301 ----CME--------------ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
CM+ E KPD YN ++ C+ ++ + L KEM G
Sbjct: 612 IKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGF 671
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+L+ T ++ L +G + E ++ L +++ + + G + L+
Sbjct: 672 LLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLD 731
Query: 403 LLKQMADKDVSPGAR 417
+L +MA P +
Sbjct: 732 VLAEMAKDGFLPNGK 746
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 140/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R++ + FA+ +L+ M G D T + +++ +C + + E + EM
Sbjct: 133 RLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIK--EAVELFNEMAGRDAMPN 190
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T ++ L KK V +A + M G++P+I Y ++NG ++ + A ++F+
Sbjct: 191 TVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFE 250
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G P V++Y++ ING CK ++ ++ M E P+ +TYNTL+Q LC
Sbjct: 251 IMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHAS 310
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L +EL K+M G++ NL+TYSI++DGL G + EA LL + L +++
Sbjct: 311 SLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYN 370
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G+ G + A EL ++ + P R + ++
Sbjct: 371 ILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMI 408
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 125/236 (52%), Gaps = 2/236 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I K ++ +A +L QM + P+ V Y ++ G+ ++A+ELF ++
Sbjct: 264 YSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMC 323
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G++P++ TY++ ++GLCK ++E +K++ M+E +PD++ YN L+Q + +L
Sbjct: 324 SSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLE 383
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+EL ++ GI +++TY+IMI GL +G EA L + + G S ++ I
Sbjct: 384 VAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVII 443
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
G Q A++L+ +M + S + ++ LL + D + + F+R QI
Sbjct: 444 QGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL--DLESHDEIISRFMRESSQI 497
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 112/240 (46%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D+ D+ + M + V+ + S+ KK++ + + NQM G+ +
Sbjct: 64 DIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYT 123
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+++N + A + ++ LG+ PD T+ INGLC + ++ +++ M
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA 183
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ P+ +T+ L+ LCK ++ R + + M KG+ N+ TY+ +++G + ++
Sbjct: 184 GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMN 243
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A + E + KG + I G C+ + +A LL QM++K++ P + L+
Sbjct: 244 DASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLM 303
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 140/272 (51%), Gaps = 2/272 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A++I + M G + T + ++ +C E + EM L +V
Sbjct: 60 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR--EASAMLNEMMSLNIMPNIVT 117
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
++ +I K+ VF+A G+L M G++P++V Y+ ++NG +Q + +A +LFD ++
Sbjct: 118 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMI 177
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PDV++YN+ ING CK + ++ M G PD+++YNTL+ LC++ L
Sbjct: 178 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 237
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L K M G + +L TYSI++DG +G + +A L + L M++ I
Sbjct: 238 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+C+ +++A +L ++ + + P + W+
Sbjct: 298 DAMCKSRNLKEARKLFSELFVQGLQPNMKHWK 329
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 147/278 (52%), Gaps = 3/278 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G+ D T + I++ +C+ + + G ++M + G +V Y+ +I SL K
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAA--GLFKKMGEAGCQPDVVTYSTIIDSLCKD 58
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +AL I + MK+ GI P+I Y ++ G+ + +A + +E++ L ++P++ T+
Sbjct: 59 RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 118
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
++ IN CK+ NV ++ M E+G +P+V+TY++L+ E+ R+L M
Sbjct: 119 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMIT 178
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG ++ +Y+I+I+G I EA L E +++GL ++ I GLCQ G +R+
Sbjct: 179 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 238
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
A +L K M P + ++LL K ++ +F
Sbjct: 239 AHDLFKNMLTNGNLPDLCTY-SILLDGFCKQGYLAKAF 275
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 140/311 (45%), Gaps = 56/311 (18%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C+P Y +I +L ++ + + + ++ K + F + LI+ + R+++
Sbjct: 41 CQPDVVTYSTIIDSLCKDRRVNEALDIFSYM-KAKGISPNIFTYNSLIQGLCNFSRWRE- 98
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
A +LN M++ + T SL+++ C++ ++ E G ++
Sbjct: 99 -----------------ASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVF--EARGVLK 139
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
M ++G +V Y++++ + +VF+A + + M + G KPD+ Y +++NG +
Sbjct: 140 TMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAK 199
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYI-------------------------------- 283
+A++LF+E++ GL PD+ +YN I
Sbjct: 200 RIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYS 259
Query: 284 ---NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+G CKQ + ++ M+ KP+++ YN L+ A+CK R L R+L E+ +
Sbjct: 260 ILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQ 319
Query: 341 GIVLNLQTYSI 351
G+ N++ + +
Sbjct: 320 GLQPNMKHWKL 330
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+G A ++ N MI+ G D + + ++ +C+ L E + M G
Sbjct: 197 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR--EAHDLFKNMLTNGNLPD 254
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+ ++ K+ + A + M+S +KP++V Y ++++ + + +A +LF
Sbjct: 255 LCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFS 314
Query: 266 ELLVLGLVPDVYTYNVY 282
EL V GL P++ + ++
Sbjct: 315 ELFVQGLQPNMKHWKLF 331
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 114/219 (52%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM + G ++ Y +I S + DA +L M I PDIV ++ ++N + +
Sbjct: 80 EMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKER 139
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+AEE++ E+L + P TYN I+G CKQ+ V+ +M+ M G PDV+T++
Sbjct: 140 KVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFS 199
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ CK + ++ E+ EM +GIV N TY+ +I G GD+ A LL E ++
Sbjct: 200 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 259
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G+ F + GLC + +RKA +L+ + +V P
Sbjct: 260 GVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCP 298
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 17/234 (7%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
NCMI D FC G R +D+LL + M + +V ++ +I + V
Sbjct: 94 NCMI-DSFCHSG-------------RWSDADQLL---RHMIEKQINPDIVTFSALINAFV 136
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K+ KV +A I +M I P + Y +++G Q+ A+ + D + G PDV
Sbjct: 137 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 196
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
T++ ING CK V+ G+++ M G + +TY TL+ C+V +L+ ++L+ EM
Sbjct: 197 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 256
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
G+ + T+ M+ GL SK ++ +A +LE+ +C + F ++C
Sbjct: 257 ISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRLIFFLFSLCSF 310
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 10/228 (4%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDG----------IKPDIVCYTMVLNGVIVQE 255
+V + ++ SL ++ +V +AL ++++M +G IK D+V T +++ +
Sbjct: 10 VVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCKDG 69
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+++ A+ LF E+ G+ P+V TYN I+ C +++ M E PD++T++
Sbjct: 70 NHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFS 129
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ A K R+++ E+ KEM I TY+ MIDG + + +A +L+ +K
Sbjct: 130 ALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK 189
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G F I G C+ V +E+ +M + + + L+
Sbjct: 190 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 237
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 12/189 (6%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP----------DVITYNTLLQA 320
G P+V T+N +N LC++ V + ++ M E G +P DV+ ++
Sbjct: 5 GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDR 64
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK + L EM KGI N+ TY+ MID G +A LL + K +
Sbjct: 65 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 124
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
F I + V +A E+ K+M + P + + ++ K D V+ + R+
Sbjct: 125 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS-MIDGFCKQDRVDDA-KRM 182
Query: 441 VDQILNTPC 449
+D + + C
Sbjct: 183 LDSMASKGC 191
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG----------IVLNLQTYSI 351
M E G +P+V+T+NTL+ +LC+ + LV M +G I ++ +
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
++D L G+ I A L E KG+ ++ I C G A +LL+ M +K
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 412 VSPGARVWEALL 423
++P + AL+
Sbjct: 121 INPDIVTFSALI 132
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 153/287 (53%), Gaps = 6/287 (2%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
++ GF +D + + +L+ +C+ + S +LL +++ +V Y +I L K
Sbjct: 106 VVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRP---NVVMYNTIIDGLCK 162
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ V +A + ++M + GI P+++ Y+ ++ G + ++A L +E+++ + P+VYT
Sbjct: 163 DKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYT 222
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y + ++ LCK+ V+ ++A M + G KP+V++YNTL+ C + E+ +++ M
Sbjct: 223 YTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMV 282
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KG+ N+ +Y+IMID L + EA LL E L+K + + + I G C+ G +
Sbjct: 283 QKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRIT 342
Query: 399 KALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
AL+LLK+M + + +LL L LD F+++ ++
Sbjct: 343 SALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 389
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E G + EM + YT ++ +L K+ KV +A +L M +G+KP++V Y ++
Sbjct: 203 EAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLM 262
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN------------------------ 284
+G + + A+++F ++ G+ P+VY+YN+ I+
Sbjct: 263 DGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMV 322
Query: 285 -----------GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
G CK + + + ++ M G DV+TY +LL ALCK + L++ L
Sbjct: 323 PNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATAL 382
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+MK +GI N TY+ +IDGL G A L + L KG ++ I GLC+
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCK 442
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G++ +AL + +M + P A +E ++ S K
Sbjct: 443 EGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEK 478
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I+ +C +D +E EM G ++ Y+ +I ++ +A G+LN+M
Sbjct: 156 IIDGLC--KDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMIL 213
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
I P++ YT++++ + + +A+ L + G+ P+V +YN ++G C V+
Sbjct: 214 KNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQN 273
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+M M + G P+V +YN ++ LCK + ++ L++E+ K +V N TYS +ID
Sbjct: 274 AKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLID 333
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G G I A LL+E ++G + + LC+ + KA L +M ++ + P
Sbjct: 334 GFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393
Query: 415 GARVWEALL 423
+ AL+
Sbjct: 394 NKYTYTALI 402
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 35/253 (13%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN---------------- 249
++++ ++ SLVK + A+ + QM+ GI+PD+ +++N
Sbjct: 10 IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69
Query: 250 -------------------GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
G+ ++ + K+ D+++ G D +Y +NGLCK
Sbjct: 70 KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ +K++ +E+ ++P+V+ YNT++ LCK + +N +L EM +GI N+ TYS
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I G G ++EA GLL E + K + + + LC+ G V++A LL M +
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKE 249
Query: 411 DVSPGARVWEALL 423
V P + L+
Sbjct: 250 GVKPNVVSYNTLM 262
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 157/329 (47%), Gaps = 25/329 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
LL+ + N P Y ++ L + + + ++L + +E + + L+
Sbjct: 206 GLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL-AVMTKEGVKPNVVSYNTLMDG 264
Query: 126 YADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVD 168
Y Q++ +F+ + + +N RV A+ +L +++ +
Sbjct: 265 YCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPN 324
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S ++ C+ ++S L ++EM G +V YT+++ +L K + + A +
Sbjct: 325 TVTYSSLIDGFCKLGRITSA--LDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATAL 382
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+MK GI+P+ YT +++G+ + A++LF LLV G +V+TYNV I+GLCK
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCK 442
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ ++ + M + MEE G PD +T+ ++++L + + ++ +L+ EM K + L +
Sbjct: 443 EGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL-LRFRD 501
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ G S + +A LL E + KGL
Sbjct: 502 FH----GERSPNENDKAEKLLHEMIAKGL 526
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 7/230 (3%)
Query: 190 LLGFVQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
L+G VQ K++ G + Y +I L K ++V +A+ +L ++ + P+ V
Sbjct: 267 LIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTV 326
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y+ +++G A +L E+ G DV TY ++ LCK N++ + M
Sbjct: 327 TYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+E G +P+ TY L+ LCK ++L + + KG +N+ TY++MI GL +G +
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGML 446
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
EA + + G + F+ I L ++ KA +LL +M KD+
Sbjct: 447 DEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 93/185 (50%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P I+ + ++ ++ + Y A LF ++ V G+ PD++T N+ IN C + +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ + +LG +P+ IT NTL++ LC E+ + ++ +G ++ +Y+ +++GL
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G+ A LL ++ M++ I GLC+ LV +A +L +M + + P
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 419 WEALL 423
+ L+
Sbjct: 188 YSTLI 192
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L++ P + +N + L K + I + M+ G +PD+ T N L+ C + +
Sbjct: 1 MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ ++ ++ G N T + ++ GL KG++ ++ ++ + +G +
Sbjct: 61 MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+ GLC+ G R AL+LL+ + D+ P ++ ++ + K VN ++
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNT-IIDGLCKDKLVNEAY 170
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 126/237 (53%), Gaps = 2/237 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I L K + V +A + ++M + GI PD + YT ++ G + + A L D
Sbjct: 150 VVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLD 209
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+++ + P VY YN+ IN LCK+ NV+ ++A M + G KP V+TY+TL+ C V
Sbjct: 210 EMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVG 269
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+ +++ M G+ N+ +Y+IMI+GL + EA LL E L+K + + ++
Sbjct: 270 EVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYN 329
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
I GLC+ G + AL L+ +M + + +LL L LD F+++
Sbjct: 330 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 134/257 (52%), Gaps = 2/257 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+++++++C++ ++ E + M K G G+V Y+ ++ +V +A I + M
Sbjct: 224 NILINALCKEGNVK--EAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G+ P++ Y +++NG+ + +A L E+L +VPD TYN I+GLCK +
Sbjct: 282 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 341
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + ++ M G DV+TY +LL ALCK + L++ L +MK +GI + TY+ +
Sbjct: 342 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 401
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDGL G + A L + L KG C + I GLC+ G+ +AL + +M D
Sbjct: 402 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 461
Query: 413 SPGARVWEALLLSSVSK 429
P A +E ++ S K
Sbjct: 462 IPNAVTFEIIIRSLFEK 478
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 104/199 (52%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ +L ++ G +PD + ++ G+ ++ + K+ D+++ G D +Y +N
Sbjct: 64 SFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLN 123
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLCK +K++ +E+ ++P+V+ YNT++ LCK + +N +L EM +GI
Sbjct: 124 GLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ TY+ +I G G ++ A LL+E + K + +++ I LC+ G V++A LL
Sbjct: 184 DAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243
Query: 405 KQMADKDVSPGARVWEALL 423
M + + PG + L+
Sbjct: 244 AVMTKEGIKPGVVTYSTLM 262
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 154/349 (44%), Gaps = 27/349 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEK---RENFETPEFIFIDLIKTYADAHRFQD 134
PP ++ ++ +LA+ Q+ S+ +E R NF T +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNIL---------------- 51
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+N F + ++ F+ +L ++ G+ D T + ++ +C + ++ L F
Sbjct: 52 -INCF-----CHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKS--LHFH 103
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++ GF V Y ++ L K + A+ +L ++ +P++V Y +++G+
Sbjct: 104 DKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKD 163
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +L+ E+ G+ PD TY I G C + ++ M P V Y
Sbjct: 164 KLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIY 223
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N L+ ALCK + + L+ M +GI + TYS ++DG G++ A + +
Sbjct: 224 NILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQ 283
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ ++ I GLC+ V +A+ LL++M K++ P + +L+
Sbjct: 284 MGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 332
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
M ++G + Y +I L K ++V +A+ +L +M + PD V Y +++G+
Sbjct: 279 HAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 338
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
A L +E+ G DV TY ++ LCK N++ + M+E G +P + TY
Sbjct: 339 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 398
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
L+ LCK L +EL + + KG +++ TY++MI GL +G EA + + +
Sbjct: 399 TALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMED 458
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G + F+ I L ++ KA +LL +M K +
Sbjct: 459 NGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 138/312 (44%), Gaps = 21/312 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL + N P Y+ +I L + + ++L + +E + + L+
Sbjct: 206 SLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL-AVMTKEGIKPGVVTYSTLMDG 264
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
Y Q++ +F+ + + +N ++ N MIN G C C +
Sbjct: 265 YCLVGEVQNAKQIFHAMVQMGVNPNVYS---YNIMIN-GLC----KCKRV---------- 306
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
DE + ++EM V Y ++I L K ++ AL ++N+M G D+V YT
Sbjct: 307 --DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 364
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+L+ + ++ KA LF ++ G+ P +YTY I+GLCK ++ ++ +
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 424
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G DV TY ++ LCK + + +M+ G + N T+ I+I L K + +A
Sbjct: 425 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKA 484
Query: 366 CGLLEEALNKGL 377
LL E + KGL
Sbjct: 485 EKLLHEMIAKGL 496
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 105/238 (44%), Gaps = 32/238 (13%)
Query: 55 QQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET 114
+++ + ++L +LH N P Y+ +I L ++ + I+S L+ + + +
Sbjct: 304 KRVDEAMNLLREMLHK----NMVPDTVTYNSLIDGLCKSGR---ITSALNLMNEMHHRGQ 356
Query: 115 PEFI--FIDLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIE 155
P + + L+ + LF K+ + I R+ A E
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE 416
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ ++ G C+D T ++++S +C++ DE L +M+ G V + +IRS
Sbjct: 417 LFQHLLVKGCCIDVWTYTVMISGLCKEGMF--DEALAIKSKMEDNGCIPNAVTFEIIIRS 474
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
L +K++ A +L++M + G+ + + V VQ + KAE+L E++ GL+
Sbjct: 475 LFEKDENDKAEKLLHEMIAKGL----LVLDFKVADVFVQNENDKAEKLLHEMIAKGLL 528
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 144/278 (51%), Gaps = 3/278 (1%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ RV A + LN M+ GF VD TC+LI+ + C++ + + ++G+ +M ++G +
Sbjct: 237 MGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYV--NRVVGYFWKMVEMGLAPNV 294
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+++T +I L K+ + A +L +M G KP++ +T +++G+ + KA LF +
Sbjct: 295 INFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLK 354
Query: 267 LLVL-GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L+ G P+V+TY ING CK++ + +++ M+E G P+ TY TL+ CKV
Sbjct: 355 LVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVG 414
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
R EL+ M +G N+ TY+ +IDGL KG + EA LL + GL +
Sbjct: 415 NFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYT 474
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ C++ ++L +M +P + L+
Sbjct: 475 ILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 18/282 (6%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++ CM+ + F +GK E + V EM+ G V
Sbjct: 153 ANEVMQCMVMN-FAENGKL----------------KEAVNMVVEMQNQGLVXSTQTLNCV 195
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ V V A + +M G+ PD V + +++ ++AE+ + ++ G
Sbjct: 196 LDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGF 255
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ D T + I+ C++ V + M E+G P+VI + L+ LCK + + E
Sbjct: 256 IVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFE 315
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL-LEEALNKGLCTQSSMFDETICGL 391
L++EM +G N+ T++ +IDGL KG +A L L+ + G + I G
Sbjct: 316 LLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGY 375
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
C+ + +A LL +M ++ + P + L+ +FV
Sbjct: 376 CKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFV 417
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 13/227 (5%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +LN + G DG T ++++S C Q D ++ L F +M K+GF + YT +
Sbjct: 454 AYRLLNKVSVHGLQADGVTYTILMSVHCRQAD--TNRSLVFFNKMLKVGFTPDIHSYTTL 511
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +++++ ++ + + S G+ P YT ++ G + A +LF + G
Sbjct: 512 ISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGC 571
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE----LN 328
PD TY I+GLCK++ ++ + M + G P +T TL CK + +N
Sbjct: 572 APDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAIN 631
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L L K +W ++T + ++ L S+G + A + L+K
Sbjct: 632 VLDRLEKR-QW------IRTVNTLVRKLCSEGKLDMAALFFHKLLDK 671
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 146/279 (52%), Gaps = 6/279 (2%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ A+ + N M+ D T ++++ +C++ ++ + M K G +
Sbjct: 252 VGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKAR--NVLAVMIKQGVDSNI 309
Query: 207 VDYTNVIRS--LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y +++ LVK+E A + N M G+ PD+ Y++++NG+ + +A LF
Sbjct: 310 VTYNSLMDGYFLVKQEN--KATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLF 367
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + P+ TYN I+GL K + ++ M G DVITY++LL ALCK
Sbjct: 368 KEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKN 427
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++++ L+ ++K +GI N+ TY+I++DGL G + +A + ++ L KG M+
Sbjct: 428 HQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMY 487
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + GLC+ GL +AL L+ +M D P A +E L+
Sbjct: 488 NVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLV 526
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 145/274 (52%), Gaps = 8/274 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF---GMVDY 209
A+ + +I GF +D + +++ +C+ + E +Q ++K+ +V Y
Sbjct: 153 ALHFHDDVIAKGFHLDQVSYGTLINGLCK-----TGETRAALQVLRKIDGLLVQPNVVMY 207
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I SL K + V A + ++M I PD+V YT ++ G ++ +A LF+++L+
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL 267
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PDVYT+N+ ++GLCK+ ++ ++A M + G +++TYN+L+ V++ N+
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ M +G+ ++Q+YSIMI+GL + EA L +E +K + + ++ I
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + G + A +L+ +M ++ + +LL
Sbjct: 388 GLLKYGRISDAWDLVNEMHNRGQPADVITYSSLL 421
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 117/222 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M + G + Y+ +I L K + V +A+ + +M S + P+ V Y +++G++
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A +L +E+ G DV TY+ ++ LCK + V+ I +I +++ G +P++ TY
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK L + + +++ KG L+++ Y++M++GL +G EA L+ + + G
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+ ++ + L + KA++LL++M + + G+ +
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNI 556
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L ++ G PD V T ++ G+ + +A D+++ G D +Y IN
Sbjct: 118 AFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLIN 177
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLCK A ++++ ++ L +P+V+ YNT++ +LCK + + +L EM K I
Sbjct: 178 GLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFP 237
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
++ TY+ +I G G + EA GL + L K + F+ + GLC+ G ++KA +L
Sbjct: 238 DVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVL 297
Query: 405 KQMADKDVSPGARVWEALL 423
M + V + +L+
Sbjct: 298 AVMIKQGVDSNIVTYNSLM 316
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 162/402 (40%), Gaps = 68/402 (16%)
Query: 58 PKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF 117
P P++ HS +Y +P P + +N D S +HI N P F
Sbjct: 17 PSTPNLFLLCRHS-RLYYTQPLP--------SFIDNVD--DAVSSFNHILHMRNPVQPIF 65
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL-NCMINDGFCVDGKTCSLIL 176
F ++ + + F +++ ++ +I F IL NC FC G
Sbjct: 66 EFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINC-----FCHLGHL----- 115
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + ++ KLGF V T +I+ L KV +AL + + + G
Sbjct: 116 -----------NFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKG 164
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV---- 292
D V Y ++NG+ + A ++ ++ L + P+V YN I+ LCK V
Sbjct: 165 FHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHAS 224
Query: 293 ----EAGIKMI------------ACM------EELG---------SKPDVITYNTLLQAL 321
E +K I C+ E +G KPDV T+N L+ L
Sbjct: 225 DLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGL 284
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK E+ + R ++ M +G+ N+ TY+ ++DG +A + +G+
Sbjct: 285 CKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDV 344
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ +V +A+ L K+M K ++P + +L+
Sbjct: 345 QSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLI 386
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 120/233 (51%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L F +EM++ G +V Y +I K ++ +A G L M G++P+++ + M++NG
Sbjct: 3 LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + E+ E+ G VPD TYN +NG CK+ N + + A M G P+
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V+TY +L+ ++CK LNR E +M +G+ N +TY+ +I+G A +G + EA +L
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E G ++ I G C G + +A+ LL+ M K V P + ++
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTII 235
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ E+L M G+ D T + +++ C++ + + L EM + G
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFH--QALVLHAEMVRNGLSPN 122
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT++I S+ K + A+ +QM G+ P+ YT ++NG Q +A + +
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G +P + TYN ING C +E I ++ M G PDV++Y+T++ + +
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
EL+R ++ EM K ++ + TYS +I GL + + EAC + +E L L +
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I C+ G + KAL L +M K P A + L+
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLI 340
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 172/390 (44%), Gaps = 35/390 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
L S + EP ++ +I L + + + S VL + R+ + E + L+
Sbjct: 39 GFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEM-SRKGYVPDEVTYNTLVNG 97
Query: 126 YADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVD 168
Y F ++ L ++ + + + A+E + M G C +
Sbjct: 98 YCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPN 157
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
+T + I++ +Q L DE + EM + GF +V Y +I ++ +A+G+
Sbjct: 158 ERTYTTIINGFAQQGLL--DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGL 215
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L M G+ PD+V Y+ +++G ++ +A ++ E++ ++PD TY+ I GLC+
Sbjct: 216 LQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCE 275
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
Q + M M + PD TY TL+ A CK +LN+ L EM KG + + T
Sbjct: 276 QRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVT 335
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD---ETIC------------GLCQ 393
Y+++I+GL + EA LL + + ++ E C G C
Sbjct: 336 YNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCM 395
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
+GL+ +A ++ + M +K+ P ++ ++
Sbjct: 396 KGLMDEADQVFESMINKNHKPNEAIYNVII 425
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 116/237 (48%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+DE GF++ M G ++ + +I L + ++ + +L +M G PD V Y
Sbjct: 34 TDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNT 93
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG + ++ +A L E++ GL P+V TY IN +CK N+ ++ M G
Sbjct: 94 LVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRG 153
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+ TY T++ + L+ ++ EM G + ++ TY+ +I+G G + EA
Sbjct: 154 LCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAI 213
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLL++ + KG+ + I G + + +A ++ +M K V P A + +L+
Sbjct: 214 GLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLI 270
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%)
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
G++ ME G P+V+TYNT++ CK++ + ++ M KG+ NL T++++I+
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL G + E +L E KG ++ + G C+ G +AL L +M +SP
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 415 GARVWEALLLS 425
+ +L+ S
Sbjct: 122 NVVTYTSLINS 132
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 103/268 (38%), Gaps = 52/268 (19%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI D T S ++ +CEQR L+ E QEM + YT +I + K+
Sbjct: 254 MIGKSVLPDAVTYSSLIQGLCEQRRLT--EACDMFQEMLTIKLPPDEFTYTTLINAYCKE 311
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGV---------------IVQEDYV------ 258
+ AL + ++M G PD V Y +++NG+ + +D +
Sbjct: 312 GDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTY 371
Query: 259 -----------------------------KAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+A+++F+ ++ P+ YNV I+G C+
Sbjct: 372 NTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRI 431
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
NV K+ M + P +T L++AL L E++ ++ + + +
Sbjct: 432 GNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELS 491
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGL 377
++++ +G++ LL E GL
Sbjct: 492 KVLVEINQKEGNMDMVFNLLTEMAKDGL 519
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 175/363 (48%), Gaps = 38/363 (10%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y ++ + + ++L +E+ + + I+ +I R D+
Sbjct: 113 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQ 172
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCSLI 175
NLF ++ I I +CMIN GFC GK T S +
Sbjct: 173 NLFIEMQDKGIFP---DIVTYSCMIN-GFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGL 228
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS- 234
++++ ++ DL+S + L +QEM G C +V ++ L K+ DAL + M+
Sbjct: 229 INALVKEGDLNSAQDL--LQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286
Query: 235 ----------DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+G++PD+ Y ++++G+I + +++AEEL++E+ G+VPD TY+ IN
Sbjct: 287 MMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMIN 346
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLCKQ+ ++ +M M P+++T+NTL+ CK ++ EL EM +GIV
Sbjct: 347 GLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVA 406
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N TY +I G G+I + + +E ++ G+ + + GL + ++KAL +L
Sbjct: 407 NAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAML 466
Query: 405 KQM 407
+++
Sbjct: 467 EEL 469
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 27/318 (8%)
Query: 131 RFQDSVNLFYKIPK-------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
R ++++LF+++ K R RV A+ +L+ M+ DG + T I+
Sbjct: 65 RVSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+C+ D S L +++M++L +V Y+ +I L K + DA + +M+ G
Sbjct: 125 GMCKMGDTVS--ALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I PDIV Y+ ++NG + +A+ L E+LV + PDV T++ IN L K+ ++ +
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQ 242
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK-----------WKGIVLN 345
++ M G P+V+T NTLL LC +L E+ K M+ + G+ +
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPD 302
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+QTY+I+I GL ++G +EA L EE ++G+ + + I GLC++ + +A ++
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362
Query: 406 QMADKDVSPGARVWEALL 423
M K SP + L+
Sbjct: 363 SMGSKSFSPNIVTFNTLI 380
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 5/229 (2%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
++ KLGF +V + ++ L +++V +AL + +QM KP++V +T ++NG+ +
Sbjct: 40 KLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREG 95
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITY 314
V+A L D ++ GL P+ TY ++G+CK + + + ++ MEEL KPDV+ Y
Sbjct: 96 RVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIY 155
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+ ++ L K + L EM+ KGI ++ TYS MI+G S G EA LL+E L
Sbjct: 156 SAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLV 215
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + F I L + G + A +LL++M V P LL
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLL 264
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 5/209 (2%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
AL ++ G P +V + +L+G+ V++ +A +LF ++ P+V T+ +N
Sbjct: 34 ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMN 89
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK-WKGIV 343
GLC++ V + ++ M E G +P+ ITY T++ +CK+ + L+++M+ I
Sbjct: 90 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ YS +IDGL G +A L E +KG+ + I G C G +A L
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDF 432
L++M + +SP + L+ + V + D
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDL 238
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D+Y++N+ I C + + + + +LG P ++T+NTLL LC ++ +L
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M +V T++ +++GL +G ++EA LL+ + GL + + G+C+
Sbjct: 74 HQMCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 395 GLVRKALELLKQMAD-KDVSPGARVWEALL 423
G AL LL++M + + P ++ A++
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAII 159
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 46/231 (19%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-----GFCFGMV 207
A ++L MI+ G C + TC+ +L +C+ L D L F K + F V
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLK-DALEMFKAMQKSMMDIDATHAFNGV 299
Query: 208 D-----YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y +I L+ + K +A + +M GI PD V Y+ ++NG+ Q +A +
Sbjct: 300 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ 359
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-------------------- 302
+FD + P++ T+N I G CK V+ G+++ M
Sbjct: 360 MFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFR 419
Query: 303 ------------EEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+E+ G PD IT +L L EL + +++E++
Sbjct: 420 KVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 143/278 (51%), Gaps = 3/278 (1%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ RV A LN M+ GF VD TC+LI+ + C++ + + ++G+ +M ++G +
Sbjct: 237 MGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYV--NRVVGYFWKMVEMGLAPNV 294
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+++T +I L K+ + A +L +M G KP++ +T +++G+ + KA LF +
Sbjct: 295 INFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLK 354
Query: 267 LLVL-GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L+ G P+V+TY ING CK++ + +++ M+E G P+ TY TL+ CKV
Sbjct: 355 LVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVG 414
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
R EL+ M +G N+ TY+ +IDGL KG + EA LL + GL +
Sbjct: 415 NFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYT 474
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ C++ ++L +M +P + L+
Sbjct: 475 ILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 3/230 (1%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM + G V + ++ + +V +A LN M G D T++++ Q+
Sbjct: 214 EMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDA-FCQK 272
Query: 256 DYV-KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
YV + F +++ +GL P+V + INGLCKQ +++ +++ M G KP+V T+
Sbjct: 273 GYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTH 332
Query: 315 NTLLQALCKVRELNR-LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
TL+ LCK + R +K ++ G N+ TY+ MI+G + + A LL
Sbjct: 333 TTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQ 392
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+GL ++ + I G C+ G +A EL+ M + SP + A++
Sbjct: 393 EQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAII 442
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ + + K+ +A+ ++ +M++ G+ P VL+ + AE +F E+ G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD ++ + + C V + + M E G D T ++ A C+ +NR+
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+M G+ N+ ++ +I+GL +G I +A LLEE + +G I GL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339
Query: 392 CQRGLVRKALELLKQMADKD-VSPGARVWEALL 423
C++G KA L ++ D P + A++
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMI 372
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +LN + G DG T ++++S C Q D ++ L F +M K+GF + YT +
Sbjct: 454 AYRLLNKVSVHGLQADGVTYTILMSVHCRQAD--TNRSLVFFNKMLKVGFTPDIHSYTTL 511
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + +++++ ++ + + S G+ P YT ++ G + A +LF + G
Sbjct: 512 ISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGC 571
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE----LN 328
PD TY I+GLCK++ ++ + M + G P +T TL CK + +N
Sbjct: 572 APDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAIN 631
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L L K +W ++T + ++ L S+G + A + L+K
Sbjct: 632 VLDRLEKR-QW------IRTVNTLVRKLCSEGKLDMAALFFHKLLDK 671
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 176/391 (45%), Gaps = 33/391 (8%)
Query: 48 TPPTKQQQQI----PKQPHILS--SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISS 101
TPP + +I K H + SL + EP + +I Q S
Sbjct: 49 TPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFS 108
Query: 102 VLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI--PKFRINRVGFAIEILNC 159
VL I K ++ L+K Q SV+ K+ F++N+V + +LN
Sbjct: 109 VLGKILKL-GYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYG-TLLN- 165
Query: 160 MINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
G C G+T C++ F++ ++ +V Y +I L K
Sbjct: 166 ----GLCKIGETRCAI-----------------KFLRMIEDSSTGLNVVMYNTIIDGLCK 204
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ V +A ++M + GI P+++ YT ++ G + A L +E+++ + P+VYT
Sbjct: 205 DKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYT 264
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y + I+ LCK+ V+ ++A M G DV+TY +LL CK + L++ L +MK
Sbjct: 265 YAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMK 324
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
GI N TY+ +IDGL G + +A L ++ L KG C ++ I GLC+ G++
Sbjct: 325 EWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLD 384
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSK 429
+AL + +M D P +E ++ S K
Sbjct: 385 EALAIKSKMEDNGCIPNVVTFEIIIRSLFKK 415
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 105/191 (54%), Gaps = 2/191 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +LN MI + T ++++ ++C++ + E + EM G +V YT++
Sbjct: 246 AFSLLNEMILKNINPNVYTYAILIDALCKEGKVK--EAKNLLAEMHYRGQPADVVTYTSL 303
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K + + A + +MK GI+P+ YT +++G+ A++LF +LLV G
Sbjct: 304 LDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGC 363
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
DV TYNV I GLCK+ ++ + + + ME+ G P+V+T+ ++++L K E ++ +
Sbjct: 364 CIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEK 423
Query: 333 LVKEMKWKGIV 343
L+ EM KG++
Sbjct: 424 LLHEMIAKGLL 434
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 89/169 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I +L K+ KV +A +L +M G D+V YT +L+G ++ KA LF ++
Sbjct: 265 YAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMK 324
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P+ YTY I+GLCK ++ K+ + G DV TYN ++ LCK L+
Sbjct: 325 EWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLD 384
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ +M+ G + N+ T+ I+I L K + +A LL E + KGL
Sbjct: 385 EALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%)
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V DA+ N M P IV + +L + + Y A L ++ V G+ P++ T N+
Sbjct: 33 VDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNI 92
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
IN C + ++ + +LG +P+ IT TL++ LC E+ + ++ +G
Sbjct: 93 LINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQG 152
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+N +Y +++GL G+ A L + M++ I GLC+ LV +A
Sbjct: 153 FQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAY 212
Query: 402 ELLKQMADKDVSPGARVWEALL 423
+ +M + + P + L+
Sbjct: 213 DFYSEMNARGIFPNVITYTTLI 234
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
N V+ I M + P ++ + +L L K++ + L K+M+ KGI NL T
Sbjct: 31 NVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTL 90
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+I+I+ G + + +L + L G + + GLC +G V+K++ D
Sbjct: 91 NILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSV----HFHD 146
Query: 410 KDVSPG---ARVWEALLLSSVSKLDFVNTS--FIRLVD 442
K V+ G +V LL+ + K+ + F+R+++
Sbjct: 147 KVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIE 184
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 141/272 (51%), Gaps = 9/272 (3%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQ---RDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
+L M GF +D TC++++ S+CE+ +D+S F + M + G +V+YT
Sbjct: 203 LLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE-----FFRRMLETGTPPNVVNYTAW 257
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLG 271
I L K+ V A +L +M G+KP++ +T +++G+ +A LF +L+
Sbjct: 258 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSS 317
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+V+TY V I G C++ + ++ M E G KP+ TY TL+ CK +R
Sbjct: 318 YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 377
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL+ +MK +G + N+ TY+ +IDG KG I EA +L A ++GL + I
Sbjct: 378 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEH 437
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G + AL+L +M + P + +L+
Sbjct: 438 CKQGHITYALDLFDRMVENGCCPDIEAYTSLI 469
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M + G C + ++ ++ KV + +L M G D T+V+ + +
Sbjct: 172 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 231
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ E F +L G P+V Y +I+GLCK+ V+ ++ M G KP+V T+ T
Sbjct: 232 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 291
Query: 317 LLQALCKVRELNR-LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ LCK+ R R +K +K N+ TY++MI G +G + A LL + +
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQ 351
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL ++ + I G C+ G +A EL+ +M + P + A++
Sbjct: 352 GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVI 399
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 136/301 (45%), Gaps = 4/301 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +L M+ G + T + ++ +C+ + F++ +K + + YT +
Sbjct: 270 AFHVLEEMVGRGLKPNVYTHTTLIDGLCKI-GWTERAFRLFLKLIKSSSYKPNVHTYTVM 328
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I ++ K+ A +L +M G+KP+ YT ++ G + +A EL +++ G
Sbjct: 329 IGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGF 388
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P++YTYN I+G CK+ ++ K++ G K D ITY L+ CK + +
Sbjct: 389 LPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALD 448
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L M G +++ Y+ +I + + E+ ++ L GL + I G C
Sbjct: 449 LFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYC 508
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ G AL + ++M + + AL+ L S+L+ + ++D+ L PC+
Sbjct: 509 KVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRL-VPCE 567
Query: 451 M 451
+
Sbjct: 568 V 568
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 3/225 (1%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A ++ +M+S G+ + VL + +V A ++FD + G+ PD ++ +
Sbjct: 129 EAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALV 188
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
C++ VE ++A M G D T ++++LC+ + E + M G
Sbjct: 189 VVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTP 248
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ Y+ IDGL + + +A +LEE + +GL I GLC+ G +A L
Sbjct: 249 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 308
Query: 404 -LKQMADKDVSPGARVWEALLLSSV--SKLDFVNTSFIRLVDQIL 445
LK + P + ++ KL +R+V+Q L
Sbjct: 309 FLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGL 353
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 54/265 (20%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-------GFCFG 205
A E++N M +GF + T + ++ C++ G +QE K+ G F
Sbjct: 376 AFELMNKMKQEGFLPNIYTYNAVIDGFCKK---------GKIQEAYKVLRMATSQGLKFD 426
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ YT +I K+ + AL + ++M +G PDI YT +++ Q ++++ FD
Sbjct: 427 KITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFD 486
Query: 266 ELLVLGLVP-----------------------------------DVYTYNVYINGLCKQN 290
+ L++GL+P D TY I+GLCK++
Sbjct: 487 KCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKES 546
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+E + M + P +T TL C+ + + ++ + + V T
Sbjct: 547 RLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQV---HTVD 603
Query: 351 IMIDGLASKGDIIEACGLLEEALNK 375
+++ L++ GD+ A L++ L++
Sbjct: 604 VVVRKLSALGDVDAASLFLKKVLDE 628
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ +A+++ + M+ +G C D + + ++S+ C+QR + +E F + +G
Sbjct: 441 GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQM--EESQKFFDKCLMIGLLPTKQ 498
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT++I K + AL + +M +G D + Y +++G+ + +A+ L++ +
Sbjct: 499 TYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGM 558
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L LVP T C++ + + ++ L + V T + +++ L + ++
Sbjct: 559 LDKRLVPCEVTRVTLTFEYCRREKTSIAVSV---LDRLDKRQQVHTVDVVVRKLSALGDV 615
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMID 354
+ +K++ + ++ TY+ I+
Sbjct: 616 DAASLFLKKVLDEDYAVDHATYTGFIN 642
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 147/298 (49%), Gaps = 7/298 (2%)
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ D + F VN K V AIEI++ M+ +G+ D T + ++S +C+ ++
Sbjct: 292 FPDQYTFNTLVNGLCKA-----GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
E + + +M V Y +I +L K+ +V +A + + S GI PD+ +
Sbjct: 347 K--EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G+ + ++ A ELF+E+ G PD +TYN+ I+ LC + ++ + M+ ME
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G VITYNTL+ CK + E+ EM+ G+ N TY+ +IDGL + +A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+++ + +G ++ + C+ G ++KA ++++ M P + L+
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 151/320 (47%), Gaps = 20/320 (6%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDG 164
LIK AH+ + ++ + +P + + + A+ I M+ G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLGFCFGMVDYTNVIRSLVKKEKVF 223
+ ++I+ C++ + ++ L F+QEM + GF + ++ L K V
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRV--EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A+ I++ M +G PD+ Y V++G+ + +A E+ D+++ P+ TYN I
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ LCK+N VE ++ + G PDV T+N+L+Q LC R EL +EM+ KG
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ TY+++ID L SKG + EA +L++ G ++ I G C+ R+A E+
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 404 LKQMADKDVSPGARVWEALL 423
+M VS + + L+
Sbjct: 493 FDEMEVHGVSRNSVTYNTLI 512
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 132/267 (49%), Gaps = 2/267 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N+V A E+ + + G D T + ++ +C R+ + +EM+ G
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN--HRVAMELFEEMRSKGCEPDEF 436
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I SL K K+ +AL +L QM+ G ++ Y +++G +AEE+FDE+
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
V G+ + TYN I+GLCK VE +++ M G KPD TYN+LL C+ ++
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++V+ M G ++ TY +I GL G + A LL KG+ ++
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I GL ++ +A+ L ++M +++ +P
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 167/382 (43%), Gaps = 32/382 (8%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
N P P Y ++ L + F D+ +L+ + K E F+ LI++YA QD
Sbjct: 78 NFSPEPALYEEILLRLGRSGSFDDMKKILEDM-KSSRCEMGTSTFLILIESYAQ-FELQD 135
Query: 135 SVNLFYKIPKFRINRVG------FAIEILNCMIND----------------GFCVDGKTC 172
+ + + I+ G F +LN +++ G D T
Sbjct: 136 EI---LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTF 192
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ ++C L L+ +++M G +T V++ +++ + AL I QM
Sbjct: 193 NVLIKALCRAHQLRPAILM--LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL-GLVPDVYTYNVYINGLCKQNN 291
G V ++++G + A E+ G PD YT+N +NGLCK +
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
V+ I+++ M + G PDV TYN+++ LCK+ E+ E++ +M + N TY+
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I L + + EA L +KG+ F+ I GLC R A+EL ++M K
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 412 VSPGARVWEALL--LSSVSKLD 431
P + L+ L S KLD
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLD 452
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 110/283 (38%), Gaps = 61/283 (21%)
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
E EF + LI + + +++N+ + + ++ ++ N +I DGFC KT
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNM---LKQMELSGCARSVITYNTLI-DGFCKANKT- 486
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++E+ EM+ G V Y +I L K +V DA +++QM
Sbjct: 487 ------------REAEEIF---DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+G KPD Y +L D KA ++ + G PD+ TY I+GLCK V
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 293 EAGIKMIACMEELG------------------------------------SKPDVITYNT 316
E K++ ++ G + PD ++Y
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 317 LLQALCKVRELNRLRELVK---EMKWKGIVLNLQTYSIMIDGL 356
+ + LC +RE V E+ KG V + ++ +GL
Sbjct: 652 VFRGLCNGG--GPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A +I+ M ++G D T ++S +C+ R + +LL +Q MK G Y
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ-MK--GINLTPHAYNP 615
Query: 212 VIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLV 269
VI+ L +K K +A+ + +M + + PD V Y +V G+ ++ A + ELL
Sbjct: 616 VIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
G VP+ + + GL + E +K++
Sbjct: 676 KGFVPEFSSLYMLAEGLLTLSMEETLVKLV 705
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 161/324 (49%), Gaps = 5/324 (1%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC 159
++++D K+ E + +F ++ K A+ + +V L + + K I + GF E+
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTV-LIHGLFKNGIKKQGF--EMYEK 258
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G + T + +++ +C +D + + EM++ G +V Y +I L ++
Sbjct: 259 MQEHGVFPNLYTYNCVMNQLC--KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K +A +++QMKS I P+++ Y +++G KA L +L GL P + TY
Sbjct: 317 MKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
NV ++G C++ + KM+ MEE G KP +TY L+ + + +L M+
Sbjct: 377 NVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEE 436
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+V ++ TYS++I G KG + EA L + + K L +++ I G C+ G +
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYR 496
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL L + M +K+++P + L+
Sbjct: 497 ALRLFRDMEEKELAPNVASYSYLI 520
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 174/361 (48%), Gaps = 23/361 (6%)
Query: 94 SQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV---------------NL 138
SQF SS+L ++ + E +T ++ +I Y + S+ N
Sbjct: 72 SQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNC 131
Query: 139 FYKIPKFRINRVGFAIEILNCMINDG---FCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
F + F + F C N+ +D + +++ CE ++ ++ +
Sbjct: 132 FNNLLTFVVGSSSF--NQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEI--EKSFDLLV 187
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
E+++ GF +V YT +I KK ++ A + +M G+ + YT++++G+
Sbjct: 188 ELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNG 247
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ E+++++ G+ P++YTYN +N LCK + K+ M E G +++TYN
Sbjct: 248 IKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ LC+ + N +++ +MK I NL TY+ +IDG S G + +A L + ++
Sbjct: 308 TLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSR 367
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
GL ++ + G C++G A +++K+M ++ + P ++V +L+ + ++ D + T
Sbjct: 368 GLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP-SKVTYTILIDTFARSDNMET 426
Query: 436 S 436
+
Sbjct: 427 A 427
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 2/266 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R A ++ + M G + T + ++ +C R++ ++E + +MK ++
Sbjct: 283 RTKDAFKVFDEMRERGVSCNIVTYNTLIGGLC--REMKANEANKVMDQMKSYVINPNLIT 340
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K+ AL + +KS G+ P +V Y ++++G + D A ++ E+
Sbjct: 341 YNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEME 400
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P TY + I+ + +N+E I++ + MEELG PDV TY+ L+ C ++N
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L K M K + N Y+ MI G +G A L + K L + + I
Sbjct: 461 EASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLI 520
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
LC+ +++A +L+++M D + P
Sbjct: 521 RVLCKERKLKEAEDLVEKMIDSGIDP 546
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 113/231 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M++ G + Y V+ L K + DA + ++M+ G+ +IV Y ++ G+ +
Sbjct: 257 EKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A ++ D++ + P++ TYN I+G C + + + ++ G P ++TY
Sbjct: 317 MKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N L+ C+ + + ++VKEM+ +GI + TY+I+ID A ++ A L
Sbjct: 377 NVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEE 436
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GL + I G C +G + +A L K M +K + P ++ ++L
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILG 487
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 90/209 (43%), Gaps = 37/209 (17%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ ++G A+ + + + G T ++++S C + D S + V+EM++ G
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM--VKEMEERGIKPSK 408
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I + + + + A+ + + M+ G+ PD+ Y+++++G ++ +A LF
Sbjct: 409 VTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 267 L--------------LVLG---------------------LVPDVYTYNVYINGLCKQNN 291
+ ++LG L P+V +Y+ I LCK+
Sbjct: 469 MVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERK 528
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQA 320
++ ++ M + G P N + +A
Sbjct: 529 LKEAEDLVEKMIDSGIDPSDTICNLISRA 557
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 163/330 (49%), Gaps = 11/330 (3%)
Query: 105 HIEKRENFETPEFIFIDLIKTYADA---------HRFQDSVNLFYKIPKFRINRVGFAIE 155
H++++ P FI LI + F S FY + + VG A++
Sbjct: 44 HLQQKTPLPIPIFIIFALIISVVSICCINQQTLFPCFSLSGFSFYVQTTCKESGVGQAMK 103
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L+ M N G D T +++++ +C++ L DE + F+ M G ++ + ++RS
Sbjct: 104 LLDEMRNKGSKPDVVTYNVLINGICKEGRL--DEAIKFLNNMPSYGCQPNVITHNIILRS 161
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ + DA +L+ M G P +V + +++N + Q +A ++ +++ + G P+
Sbjct: 162 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 221
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+YN ++G CK+ ++ I+ + M G PD++TYNTLL ALCK +++ E++
Sbjct: 222 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 281
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
++ KG L TY+ +IDGL+ G A LL+E KGL + + GL + G
Sbjct: 282 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 341
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLS 425
V +A++ + + P A + +++L
Sbjct: 342 KVDEAIKFFHDLEGLGIRPNAITYNSIMLG 371
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 158/316 (50%), Gaps = 21/316 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ Y C+P ++ +++++ ++ D +L + ++ +P + +++
Sbjct: 139 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC--SPSVVTFNIL--- 193
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+N R +G AI+IL M G + + + +L C+++ +
Sbjct: 194 ---------INFL-----CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM- 238
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + ++ M G +V Y ++ +L K KV A+ ILNQ+ S G P ++ Y
Sbjct: 239 -DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 297
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ +A +L DE+ GL PD+ TY+ ++GL ++ V+ IK +E LG
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 357
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P+ ITYN+++ LCK R+ +R + + M K TY+I+I+G+A +G EA
Sbjct: 358 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 417
Query: 367 GLLEEALNKGLCTQSS 382
LL E ++GL +SS
Sbjct: 418 DLLNELCSRGLVKKSS 433
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 141/277 (50%), Gaps = 4/277 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGM 206
R+ AI+ LN M + G + T ++IL S+C R + +++LL +M + G +
Sbjct: 131 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL---SDMLRKGCSPSV 187
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V + +I L ++ + A+ IL +M G P+ + Y +L+G ++ +A E D
Sbjct: 188 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 247
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G PD+ TYN + LCK V+ ++++ + G P +ITYNT++ L KV +
Sbjct: 248 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 307
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
R +L+ EM+ KG+ ++ TYS ++ GL+ +G + EA + G+ + ++
Sbjct: 308 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 367
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ +A++ L M K P + L+
Sbjct: 368 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 404
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 169/407 (41%), Gaps = 48/407 (11%)
Query: 42 VKQSLTTPPTKQQQQIPKQPHIL-----------------SSLLHSFSIYNCEPPPEAYH 84
V L+ PP QQ+ P I +L FS+ +
Sbjct: 34 VHYGLSIPPFHLQQKTPLPIPIFIIFALIISVVSICCINQQTLFPCFSL-------SGFS 86
Query: 85 FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQDSVNLFYKIP 143
F ++T + S +LD E R P+ + + LI R +++ +P
Sbjct: 87 FYVQTTCKESGVGQAMKLLD--EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144
Query: 144 KF--RINRVGFAIEILNCMINDGFCVDG---------KTCS-------LILSSVCEQRDL 185
+ + N + I IL M + G +D K CS ++++ +C Q L
Sbjct: 145 SYGCQPNVITHNI-ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 203
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ +++M G + Y ++ K++K+ A+ L+ M S G PDIV Y
Sbjct: 204 G--RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 261
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+L + A E+ ++L G P + TYN I+GL K E IK++ M
Sbjct: 262 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 321
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G KPD+ITY++L+ L + +++ + +++ GI N TY+ ++ GL A
Sbjct: 322 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 381
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
L ++K + + I G+ GL ++AL+LL ++ + +
Sbjct: 382 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 182/392 (46%), Gaps = 35/392 (8%)
Query: 38 AKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHF---------VIK 88
+K K + T PT QQ I + I +L+ I++ A F +I
Sbjct: 32 SKAMFKWAKTVTPTHVQQLIQAERDIKKALI----IFDSATAEYANGFKHDLNTFSLMIS 87
Query: 89 TLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRIN 148
L +QF ++LD + K E + E I + + + Y H+ DS+ +F+K+ F
Sbjct: 88 KLISANQFRLAETLLDRM-KEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDF--- 143
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+C + K+ +L+ + E+ L S F ++M+K+G +
Sbjct: 144 ---------HCKPTE------KSYISVLAILVEENQLKS--AFRFYRDMRKMGIPPTVTS 186
Query: 209 YTNVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+I++ K D A+ + M + G +PD Y ++NG+ V+A+EL E+
Sbjct: 187 LNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEM 246
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G P V TY I+GLC+ NNV+ ++++ M++ +P+V TY++L+ CK
Sbjct: 247 ETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHS 306
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+R R++++ M K + N+ +YS +++GL ++G I EA + + +G + ++ +
Sbjct: 307 SRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKI 366
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ LC ++A L +M + P W
Sbjct: 367 VNCLCDVSRFQEAANFLDEMVLCGIKPNRITW 398
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 132/316 (41%), Gaps = 38/316 (12%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET----PEFI-FID 121
L + S + CEP Y +I L C S+++ E + ET P + +
Sbjct: 207 LFRTMSNHGCEPDSYTYGTLINGL------CRFRSIVEAKELLQEMETKGCSPSVVTYTS 260
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
+I + +++ L + I F L DGFC G +
Sbjct: 261 IIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLM----DGFCKTGHSS--------R 308
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
RD+ ++ M + M+ Y+ ++ L + K+ +AL I ++MK G KPD
Sbjct: 309 ARDI--------LELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDA 360
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD-------VYTYNVYINGLCKQNNVEA 294
Y ++N + + +A DE+++ G+ P+ V T+N I+GLC NN
Sbjct: 361 GLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNR 420
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ + G V T+N+LL+ C ++L + ++ EM G + + +S M++
Sbjct: 421 AFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVN 480
Query: 355 GLASKGDIIEACGLLE 370
+ +A LL+
Sbjct: 481 CFCDERKACDAMKLLQ 496
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 162/349 (46%), Gaps = 22/349 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + C P +Y VI L + Q + V+D + +R P I TY
Sbjct: 101 LLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGC--QPNVI------TY 152
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
V+ F R+ + A+E++ M G+ + T + I+ +C R L
Sbjct: 153 GTL------VDGF-----CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKL- 200
Query: 187 SDELLGFVQEMKKLGFCFGMV-DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D L +EM++ G C V Y+ ++ SLVK KV DA ++ M S G P++V Y+
Sbjct: 201 -DSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYS 259
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+L+G+ +A L + G P++ TYN I+G CK ++ ++ M +
Sbjct: 260 SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 319
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G +P+V+TY LL A CK + LV+ M KG V NL TY+ ++D K ++ A
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 379
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
C LL + KG ++ I GLC+ V + + LL+QM + P
Sbjct: 380 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 428
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 131/261 (50%), Gaps = 8/261 (3%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMK 233
IL +C+ SD +L F +EM K C V Y +I L K +++ DA+ +L +M
Sbjct: 16 ILRGLCDAGQ-CSDAVLHF-REMSKT--CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV 71
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
+G P++ Y VL+G A L +++++ G PDV +Y INGLCK + V+
Sbjct: 72 DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++ M + G +P+VITY TL+ C+V +L+ ELV++M +G N TY+ ++
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 191
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC-GLCQRGLVRKALELLKQMADKDV 412
GL S + A L +E G C TI L + G V A L++ M K
Sbjct: 192 HGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGC 251
Query: 413 SPGARVWEALL--LSSVSKLD 431
SP + +LL L KLD
Sbjct: 252 SPNVVTYSSLLHGLCKAGKLD 272
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 162/367 (44%), Gaps = 54/367 (14%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF----------------RINRVGF 152
R+ + + +++ DA + D+V F ++ K + +R+
Sbjct: 3 RKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDD 62
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI +L M+++GF + + + +L C+ + + L +++M G +V YT V
Sbjct: 63 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV--ENALWLLEQMVMRGCPPDVVSYTTV 120
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K ++V +A ++++M G +P+++ Y +++G D A EL ++ G
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS------------------------- 307
P+ TYN ++GLC +++ +++ MEE GS
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240
Query: 308 -----------KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
P+V+TY++LL LCK +L+ L++ M G N+ TY+ +IDG
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 300
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G I EA LLEE ++ G + + C+ G A+ L++ M +K P
Sbjct: 301 CKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL 360
Query: 417 RVWEALL 423
+ +LL
Sbjct: 361 FTYNSLL 367
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 151/323 (46%), Gaps = 39/323 (12%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A ++ M++ G + T S +L +C+ L DE +Q M + G +V
Sbjct: 234 GKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKL--DEATALLQRMTRSGCSPNIV 291
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG---------------VI 252
Y +I K ++ +A +L +M G +P++V YT++L+ V+
Sbjct: 292 TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM 351
Query: 253 VQEDYV--------------------KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
V++ YV +A +L ++ G VP+V +YN I GLCK V
Sbjct: 352 VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV 411
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
G+ ++ M PD++T+NT++ A+CK ++ EL ++ G NL TY+ +
Sbjct: 412 HEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKD 411
+ GL +A LL E K C+ + ++ I GLC+ V +A +L QM
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 531
Query: 412 VSPGARVWEALLLSSVSKLDFVN 434
++P + ++++SS+ K F++
Sbjct: 532 LAPDDVTY-SIVISSLCKWRFMD 553
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 147/306 (48%), Gaps = 18/306 (5%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCF 204
+ +V + +L M+++ D T + I+ ++C+ + + EL +QE G
Sbjct: 407 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES---GCTP 463
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y +++ L K + A +L +M + G PDI+ Y V++G+ + +A +L
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 523
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F ++L GL PD TY++ I+ LCK ++ ++ M + G P ITY TL+ CK
Sbjct: 524 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
L++ E+++ + KG ++ T+SI ID L+ +G + +A LLE L GL +
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 643
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL------------LLSSVSKLD 431
++ + G C A++L + M P + L LL+ VSK
Sbjct: 644 YNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSK-S 702
Query: 432 FVNTSF 437
V+T F
Sbjct: 703 MVDTGF 708
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M+ GF +V Y +I SL + K+ A +++++ DG KP ++ YT+++ I++
Sbjct: 157 MRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGR 216
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A ELFDEL+ GL PD+YTYN I G+CK+ + + + + G PDV++YN
Sbjct: 217 INEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNI 276
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL++ L+K+M G N+ T+SI+I +G + EA +LE KG
Sbjct: 277 LLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKG 336
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L S +D I C+ G + A+E L++M P
Sbjct: 337 LTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLP 374
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 152/313 (48%), Gaps = 19/313 (6%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A+E+ + +++ G D T + I+ +C++ D L FV+ + G +V
Sbjct: 216 RINEALELFDELVSRGLRPDLYTYNAIIRGICKEG--MEDRALDFVRHLSARGCNPDVVS 273
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++RS + K + D ++ M G +P++V ++++++ + +A + + +
Sbjct: 274 YNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMK 333
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL PD Y+Y+ I+ CK+ ++ I+ + M G PD++ YNT+L LCK +
Sbjct: 334 EKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCAD 393
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ +++ G ++ Y+ M L S G+ I+A ++ E + KG+ ++ I
Sbjct: 394 LALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLI 453
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP--------------GARVWEA--LLLSSVSKLDF 432
LC+ GLV +A+ LL M P RV+E LL++ V K
Sbjct: 454 SCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCL 513
Query: 433 VN-TSFIRLVDQI 444
N TS++ L++ I
Sbjct: 514 PNETSYVLLIEGI 526
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 111/206 (53%), Gaps = 1/206 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
++L L + S G KPD+V T ++ G + KA + + L G PDVY+YN I
Sbjct: 80 ESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMI 138
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G K N +++ ++ M G PDV+TYN ++ +LC +L E++ E+ G
Sbjct: 139 SGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCK 198
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ TY+I+I+ +G I EA L +E +++GL ++ I G+C+ G+ +AL+
Sbjct: 199 PSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDF 258
Query: 404 LKQMADKDVSPGARVWEALLLSSVSK 429
++ ++ + +P + LL S ++K
Sbjct: 259 VRHLSARGCNPDVVSYNILLRSFLNK 284
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 152/308 (49%), Gaps = 13/308 (4%)
Query: 120 IDLIKTYAD--AHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+++++TY D + + ++ F K N++ A ++ + M + GF D T ++++
Sbjct: 120 MEILETYGDPDVYSYNAMISGFSKA-----NQIDSANQVFDRMRSRGFSPDVVTYNIMIG 174
Query: 178 SVCEQRDLSSDELLGF--VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
S+C + L L F + E+ K G ++ YT +I + + + ++ +AL + +++ S
Sbjct: 175 SLCSRGKLE----LAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSR 230
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G++PD+ Y ++ G+ + +A + L G PDV +YN+ + ++ E G
Sbjct: 231 GLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDG 290
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+++ M G +P+V+T++ L+ + C+ + +++ MK KG+ + +Y +I
Sbjct: 291 ERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISA 350
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+G + A LE+ ++ G ++ + LC+ G AL++ +++ + P
Sbjct: 351 FCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPT 410
Query: 416 ARVWEALL 423
R + +
Sbjct: 411 VRAYNTMF 418
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 2/237 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R RV A+ +L M G D + ++S+ C++ L D + ++++M G
Sbjct: 318 REGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRL--DLAIEYLEKMVSDGCLPD 375
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V+Y ++ +L K AL + ++ G P + Y + + + + +KA E+
Sbjct: 376 IVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMIS 435
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G+ PD TYN I+ LC+ V+ I ++ ME +P VI++N +L +CK
Sbjct: 436 EMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAH 495
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ EL+ M KG + N +Y ++I+G+A G EA L G+ + S
Sbjct: 496 RVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDS 552
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 2/245 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S+++SS C R+ E + ++ MK+ G Y +I + K+ ++ A+ L
Sbjct: 308 THSILISSFC--REGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLE 365
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M SDG PDIV Y +L + A ++F++L +G P V YN + L
Sbjct: 366 KMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCG 425
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N ++MI+ M G PD ITYN+L+ LC+ ++ L+ +M+ + +++
Sbjct: 426 NKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFN 485
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ G+ + E LL + KG + + I G+ G +A+EL +
Sbjct: 486 IVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRL 545
Query: 411 DVSPG 415
V G
Sbjct: 546 GVISG 550
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 166/380 (43%), Gaps = 41/380 (10%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
N P +Y +I LA+ + D ++ + + TP + + LI A+ F
Sbjct: 318 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKL--LHSGVTPSTVAYTSLIHGLCMANSFD 375
Query: 134 DSVNLFYKIPKFRINRVGF----------------------AIEILNCMINDGFCVDGKT 171
D+ LF + NR G A +++ MI DG D T
Sbjct: 376 DARELFADM-----NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 430
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF-------- 223
+ ++ +C+ + +E L EM++LG + +I L ++ K+
Sbjct: 431 YNTVMDGLCKSSRV--EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKL 488
Query: 224 -DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+A +L +M DG PD+V Y+ +++G+ A L ++++ P V T N
Sbjct: 489 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 548
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+GLCK ++ +++ M G PDV+TYNTL+ C+ + R REL+ +M +G+
Sbjct: 549 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 608
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
N+ TY+ ++ GL + EACG+ + + G + I G C G V L+
Sbjct: 609 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 668
Query: 403 LLKQMADKDVSPGARVWEAL 422
L +M +SP V+ L
Sbjct: 669 LFGEMVCAGISPDHVVYGTL 688
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 164/400 (41%), Gaps = 46/400 (11%)
Query: 27 AKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYN----------- 75
AK + D + Q + S TP T +SL+H + N
Sbjct: 334 AKAGKLNDARNLFQKLLHSGVTPSTVA----------YTSLIHGLCMANSFDDARELFAD 383
Query: 76 -----CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKR-ENFETPEFI-FIDLIKTYAD 128
C P P Y+ +I + + D I+K E+ P+ + + ++
Sbjct: 384 MNRRGCPPSPVTYNVMIDASCKRGM---LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 440
Query: 129 AHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ R ++++ LF ++ + NR IL G C K + C++ L
Sbjct: 441 SSRVEEALLLFNEMERLGCTPNRRSHNTIIL------GLCQQSK-----IDQACQRGKL- 488
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE ++ M G +V Y+ +I L +V DA +L M KP +V
Sbjct: 489 -DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 547
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ +A E+ D ++ G PDV TYN ++G C+ E ++++ M G
Sbjct: 548 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 607
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+V+TY L+ LCK L + +MK G NL TY+ +I G S G +
Sbjct: 608 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 667
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
L E + G+ ++ LC+ G +ALE+L++
Sbjct: 668 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 707
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 29/373 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y+ VI L +N + + + + + +R N + + LI A A + D+ NLF K
Sbjct: 290 GYNIVILGLCQNDRIDEAVQMFEKMNER-NVSPDSWSYGILIDGLAKAGKLNDARNLFQK 348
Query: 142 IPKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + N A E+ M G T ++++ + C++
Sbjct: 349 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L +E +++M + G +V Y V+ L K +V +AL + N+M+ G P+ +
Sbjct: 409 L--EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSH 466
Query: 245 TMVLNGVIVQE--DYVKAEELFDELLVL-------GLVPDVYTYNVYINGLCKQNNVEAG 295
++ G+ Q D DE L G VPDV TY+ I+GLC V+
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ M + KP V+T NTL+ LCK + RE++ M G ++ TY+ ++ G
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 586
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G A LL + + +GL + + GLC+ + +A + QM +P
Sbjct: 587 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 646
Query: 416 ARVWEALLLSSVS 428
+ AL+L S
Sbjct: 647 LFTYTALILGFCS 659
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 11/234 (4%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y VI L + +++ +A+ + +M + PD Y ++++G+ A LF +LL
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P Y I+GLC N+ + ++ A M G P +TYN ++ A CK L
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L+K+M G V ++ TY+ ++DGL + EA L E G + I
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470
Query: 389 CGL---------CQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
GL CQRG + +A LLK+M D P + L+ L S++++D
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 43/269 (15%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++ + +V A +L M + PD V Y VL+G+ +A LF
Sbjct: 212 LVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFG 271
Query: 266 E--------------------LLVLGLV---------------------PDVYTYNVYIN 284
+ +++LGL PD ++Y + I+
Sbjct: 272 DRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILID 331
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GL K + + + G P + Y +L+ LC + REL +M +G
Sbjct: 332 GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPP 391
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ TY++MID +G + EAC L+++ + G ++ + GLC+ V +AL L
Sbjct: 392 SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 451
Query: 405 KQMADKDVSPGARVWEALLLS--SVSKLD 431
+M +P R ++L SK+D
Sbjct: 452 NEMERLGCTPNRRSHNTIILGLCQQSKID 480
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I SL K+++ ++ M G PD +T +L G+ +AE + DE+
Sbjct: 47 YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMR 106
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ P T + + LC + ++E +++ M S YN ++ ALCK ++
Sbjct: 107 SRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVD 162
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL + M K I L + ++ GL G I EA + E + ++ E
Sbjct: 163 DALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLE-- 220
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
G C RG V KA ELL+ M D++ +P
Sbjct: 221 -GFCSRGQVDKARELLRAMPDEECAP 245
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT-----YNVYINGL 286
M GI P + +T V+ G + F+ + + L+ + ++ YNV I+ L
Sbjct: 1 MFQQGIFPAPLLFTSVIQG------WCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSL 54
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
K+ EA KM+ M + G PD T+ T+L LCK +++ ++ EM+ + I
Sbjct: 55 SKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYF 114
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
T S + L +G + A LLE SS ++ + LC+ V ALEL +
Sbjct: 115 ATSSFLAHELCLRGSMERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALELART 170
Query: 407 MADKDVSPGARVWEALLLS 425
M++K + A +++L+
Sbjct: 171 MSEKRIPLAAGSLDSVLVG 189
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 9/221 (4%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y V+ +L K +V DAL + M I VL G++ +A +++ E
Sbjct: 148 YNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENR 207
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK---VR 325
P + T NV + G C + V+ +++ M + PD ++Y T+L LCK V
Sbjct: 208 ---REPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVE 264
Query: 326 ELNRL---RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
E RL REL +L+ Y+I+I GL I EA + E+ + + S
Sbjct: 265 EAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSW 324
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GL + G + A L +++ V+P + +L+
Sbjct: 325 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLI 365
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 183/397 (46%), Gaps = 39/397 (9%)
Query: 48 TPPTKQQQQI----PKQPHILS-SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSV 102
TPP Q +I K H + SL H + +P + +I Q SV
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 115
Query: 103 LDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI--PKFRINRVGFAIEILNCM 160
L I KR + LIK + + +++ K+ F++N+VG+ I
Sbjct: 116 LAKILKR-GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLI---- 170
Query: 161 INDGFCVDGKTCSLI-LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
+G C G T + I L + R D +V Y+ +I +L K
Sbjct: 171 --NGVCKIGDTRAAIKLLKKIDGRLTKPD-----------------VVMYSTIIDALCKY 211
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ V +A G+ ++M GI D+V Y ++ G + +A L + +++ + PDVYTY
Sbjct: 212 QLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTY 271
Query: 280 NVYINGLCKQNNVEAGIKMIAC-------MEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ ++ LCK+ V+ + I+ M + G DVITY++L+ LCK L+R
Sbjct: 272 TILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 331
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +MK +GI N+ T++I++DGL G + +A + ++ L KG ++ I G C
Sbjct: 332 LFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 391
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++GL+ +AL +L +M D P A +E ++++ K
Sbjct: 392 KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 428
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 112/196 (57%), Gaps = 5/196 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE-----LLGFVQEMKKLGFCFGMV 207
AI +LN M+ D T ++++ ++C++ + + + + EM+ G ++
Sbjct: 252 AIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVI 311
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+++I L K + A+ + N+MK GI+P++ +T++L+G+ A+E+F +L
Sbjct: 312 TYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDL 371
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G +VYTYNV ING CKQ +E + M++ ME+ G P+ T+ T++ AL K E
Sbjct: 372 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 431
Query: 328 NRLRELVKEMKWKGIV 343
++ +L+++M +G++
Sbjct: 432 DKAEKLLRQMIARGLL 447
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+L ++ G P V ++ G+ ++ KA D+LL G + Y IN
Sbjct: 112 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLIN 171
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G+CK + A IK++ ++ +KPDV+ Y+T++ ALCK + ++ L EM KGI
Sbjct: 172 GVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 231
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA---- 400
++ TY+ +I G G + EA GLL + K + + + LC+ G V++A
Sbjct: 232 DVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRI 291
Query: 401 ---LELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+L+ +M D+ + +L+ L LD F ++ DQ
Sbjct: 292 SYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 339
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 154/293 (52%), Gaps = 3/293 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
++V A E+L M++ G + T + +L +C R +S + L +++M G +V
Sbjct: 240 SKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVS--DALALMRDMTCRGCTPNVV 297
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L K +V DA +L M G PD++ Y M++NG+ + ++ L
Sbjct: 298 TYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA 357
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G+ PDV TY+ I GLC+ N ++ +++ ++ G PDVI Y+TL+ LCK ++
Sbjct: 358 VSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 417
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ +L + M G ++ TYS +IDGL G + EA LL + G + ++
Sbjct: 418 DEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSL 477
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
I GLC + +A+EL+++M + +P A + +L+ + +++ V+++ + L
Sbjct: 478 IKGLCDLNHLDEAIELVEEMERSNCAPSAVTYN-ILIHGMCRMERVDSAVVLL 529
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 176/382 (46%), Gaps = 29/382 (7%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C+P Y +++ + D + + +N F+ LI A R D+
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEM-RSKNLVPNVFLCSILIDGLCKAKRSIDA 63
Query: 136 VNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+ F + I R+ A+ IL+ M + G + T + ++
Sbjct: 64 LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM------ 232
+C+ + D + MK + MV Y ++ L + K+ A+ + +M
Sbjct: 124 LCKNNE--PDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH 181
Query: 233 -KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
D P+++ Y+++++G+ +A EL + + G PDV TY + ++GLCK++
Sbjct: 182 DMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 241
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
V A +++ M + G P+++TYN+LL LC+ R ++ L+++M +G N+ TY
Sbjct: 242 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 301
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+IDGL G + +AC +L + ++KG +++ I GLC+ V +++ LL++
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361
Query: 412 VSPGARVWEALL--LSSVSKLD 431
+ P + +++ L ++LD
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLD 383
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 176/383 (45%), Gaps = 33/383 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET---PEFI-FIDL 122
LL S C P Y ++ L + S+ VL RE + P + + L
Sbjct: 213 LLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL-----REMLDAGCVPNLVTYNSL 267
Query: 123 IKTYADAHRFQDSVNLFYKI------PKF-----------RINRVGFAIEILNCMINDGF 165
+ A R D++ L + P ++ RV A +L MI+ G
Sbjct: 268 LHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG 327
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
D +++++ +C+ + DE + ++ G +V Y++VI L + ++ +A
Sbjct: 328 TPDLMIYNMLINGLCKADQV--DESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA 385
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+L +KS G PD++ Y+ +++G+ +A +L++ + G DV TY+ I+G
Sbjct: 386 CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDG 445
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LCK V+ ++A M +G+ P +TYN+L++ LC + L+ ELV+EM+ +
Sbjct: 446 LCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPS 505
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD-----ETICGLCQRGLVRKA 400
TY+I+I G+ + A LLE+A + + + D I GLC+ G V +A
Sbjct: 506 AVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEA 565
Query: 401 LELLKQMADKDVSPGARVWEALL 423
L+ ++M D V P + LL
Sbjct: 566 LDYFQEMIDNGVIPDHITYSILL 588
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 178/386 (46%), Gaps = 20/386 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
++LH + CEP Y+ +I L +N++ + +H++ E +P + + L+
Sbjct: 100 AILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVEC--SPSMVTYNTLLD 157
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + ++ LF ++ R + ++D + T S+++ +C+
Sbjct: 158 GLFRTGKLERAMALFQEMLDRRSHD-----------MDDRCSPNVITYSVLIDGLCKANR 206
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+S + + ++ MK G ++ YT ++ L K+ KV A +L +M G P++V Y
Sbjct: 207 VS--QAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTY 264
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+L+G+ A L ++ G P+V TY I+GLCK V+ M+A M +
Sbjct: 265 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID 324
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD++ YN L+ LCK +++ L++ GI ++ TYS +I GL + E
Sbjct: 325 KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDE 384
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL- 423
AC LL ++G ++ I GLC+ G V +A +L + MA + L+
Sbjct: 385 ACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLID 444
Query: 424 -LSSVSKLDFVNTSFIRLVDQILNTP 448
L ++D + R+V + TP
Sbjct: 445 GLCKAGRVDEAHLLLARMVR--MGTP 468
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 146/280 (52%), Gaps = 10/280 (3%)
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
CS+++ +C+ + S D L F + M+ G V YT ++ L K++++ AL IL++
Sbjct: 47 CSILIDGLCKAKR-SIDALRCF-RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHE 104
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M+ G +P++V Y +++G+ + +A+ELF+ + + P + TYN ++GL +
Sbjct: 105 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 164
Query: 292 VEAGIKMIACMEELGS-------KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
+E + + M + S P+VITY+ L+ LCK +++ EL++ MK +G
Sbjct: 165 LERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSP 224
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
++ TY+I++DGL + + A +L E L+ G ++ + GLC+ V AL L+
Sbjct: 225 DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM 284
Query: 405 KQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ M + +P + L+ + K+ V + L D I
Sbjct: 285 RDMTCRGCTPNVVTY-GTLIDGLCKVGRVKDACAMLADMI 323
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 141/319 (44%), Gaps = 30/319 (9%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFID-LI 123
+L+ + C P Y +I L + + D ++L D I+K TP+ + + LI
Sbjct: 282 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK---GGTPDLMIYNMLI 338
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
A + +S+ L + ++ G D T S ++ +C
Sbjct: 339 NGLCKADQVDESIALLRR------------------AVSGGIKPDVVTYSSVIYGLCRSN 380
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
L DE + +K G ++ Y+ +I L K KV +A + M DG D+V
Sbjct: 381 RL--DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVT 438
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ +++G+ +A L ++ +G P TYN I GLC N+++ I+++ ME
Sbjct: 439 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 498
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK-----GIVLNLQTYSIMIDGLAS 358
P +TYN L+ +C++ ++ L+++ K + G L+ YS +IDGL
Sbjct: 499 RSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCK 558
Query: 359 KGDIIEACGLLEEALNKGL 377
G + EA +E ++ G+
Sbjct: 559 AGRVAEALDYFQEMIDNGV 577
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK---PDVITYNTLLQALCKV-RELNR 329
PDVYTY + G C+ ++ + C +E+ SK P+V + L+ LCK R ++
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQR---CFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
LR + M+ GIV + Y+ ++ GL + + +A +L E + G ++ I
Sbjct: 64 LR-CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID 122
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
GLC+ +A EL + M + SP + LL L KL+ F ++D+
Sbjct: 123 GLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR 178
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +V A ++ M DG D T S ++ +C+ + LL + M ++G
Sbjct: 413 KAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLL--LARMVRMGTPPS 470
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++I+ L + +A+ ++ +M+ P V Y ++++G+ E A L +
Sbjct: 471 TMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLE 530
Query: 266 E-----LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ + G D Y+ I+GLCK V + M + G PD ITY+ LL+
Sbjct: 531 QAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEG 590
Query: 321 LCKVRELNRLRELV 334
L K ++L+ LR LV
Sbjct: 591 LKKSKDLHELRHLV 604
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 118/212 (55%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L + V ++ +L +M GI PD + + ++NG+ + +A ELF+E++ G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+V +Y INGLCK N + + ME+ G KP+V+TY+T++ +LCK R +N
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E + EM +GI N+ TY+ ++ G + G + EA L +E + + + + F + GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G+V +A + + M +K V P + AL+
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALM 345
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 153/306 (50%), Gaps = 22/306 (7%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL-NCMINDGFCVDGKTCSLILS 177
F + ++A ++ V+L ++ FR+ +++ IL NC+ C L
Sbjct: 96 FGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCL-----------CRL--- 141
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
D S + + +M KLG + + +I L + K+ +A+ + N+M G
Sbjct: 142 ---NHVDFS----VSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P+++ YT V+NG+ + A ++F ++ G P+V TY+ I+ LCK V ++
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAME 254
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M E G P+V TYN+++ C + +LN L KEM + ++ N T++I++DGL
Sbjct: 255 FLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLC 314
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+G + EA + E KG+ S ++ + G C + L+ +A ++ + M K +PGA
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374
Query: 418 VWEALL 423
+ L+
Sbjct: 375 SYNILI 380
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ N M+ G + + + +++ +C+ + S + ++M++ G +V Y+ +
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSM--AVDVFKKMEQNGCKPNVVTYSTI 239
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K V DA+ L++M GI P++ Y +++G +A LF E++ +
Sbjct: 240 IDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDV 299
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P+ T+ + ++GLCK+ V + M E G +PD+ TYN L+ C R +N ++
Sbjct: 300 MPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKK 359
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ + M KG +Y+I+I+G + EA LL E +K L + + + GLC
Sbjct: 360 VFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLC 419
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
Q G ++AL L K+M P + LL
Sbjct: 420 QLGRPKEALNLFKEMCSYGPHPNLVTYVILL 450
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E L+ M+ G + T + I+ C L +E +EM V +T +
Sbjct: 252 AMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQL--NEATRLFKEMVGRDVMPNTVTFTIL 309
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K+ V +A + M G++PDI Y +++G +Q +A+++F+ ++ G
Sbjct: 310 VDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGC 369
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P ++YN+ ING CK ++ ++A M PD +TY+TL+Q LC++
Sbjct: 370 APGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALN 429
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L KEM G NL TY I++DG G + EA LL+ K L + I G+
Sbjct: 430 LFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMF 489
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + A EL ++ P R + ++
Sbjct: 490 IAGKLEVAKELFSKLFGDGTRPDIRTYTVMI 520
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 164/369 (44%), Gaps = 28/369 (7%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C+P Y +I +L ++ D L + +R F + ++ + + + ++
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVER-GIPPNVFTYNSIVHGFCNLGQLNEA 287
Query: 136 VNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDG--KTCSLILSSVCE---QRDLSSD 188
LF ++ + N V F I + DG C +G L+ ++ E + D+S+
Sbjct: 288 TRLFKEMVGRDVMPNTVTFTILV------DGLCKEGMVSEARLVFETMTEKGVEPDISTY 341
Query: 189 ELL--GF-----VQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
L G+ + E KK+ G G Y +I K ++ +A +L +M
Sbjct: 342 NALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYH 401
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+ PD V Y+ ++ G+ +A LF E+ G P++ TY + ++G CK +++
Sbjct: 402 KALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE 461
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+K++ M+E +P+++ Y L++ + +L +EL ++ G +++TY++MI
Sbjct: 462 ALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIK 521
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL +G EA L + + G S ++ I G Q A+ L+ +M K S
Sbjct: 522 GLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSV 581
Query: 415 GARVWEALL 423
++ LL
Sbjct: 582 NLSTFQMLL 590
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL +M +P +V + L ++ Y L +++ + + +VY+ N+ I
Sbjct: 76 DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILI 135
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N LC+ N+V+ + ++ M +LG PD IT+N L+ LC ++ EL EM +G
Sbjct: 136 NCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHE 195
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ +Y+ +I+GL G+ A + ++ G + I LC+ LV A+E
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEF 255
Query: 404 LKQMADKDVSPGARVWEALL 423
L +M ++ + P + +++
Sbjct: 256 LSEMVERGIPPNVFTYNSIV 275
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 147/283 (51%), Gaps = 2/283 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ ++ +A+++ N MI+D + T S+++ C++ + E + M K +
Sbjct: 246 VGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVR--EAKNVLAVMMKKNVKLDV 303
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y +++ ++V A + N M G+ PD+ Y++++NG + +A +LF+E
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + P+V TYN ++GLCK ++++ M + G ++ITYN++L A+CK
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNH 423
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+++ L+ ++K KGI ++ TY+++I+GL G + +A + E+ L KG +
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
I G C +G + L +L +M D P A +E L+ S K
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEK 526
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 192/399 (48%), Gaps = 32/399 (8%)
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
+ + LLH N PP + ++ +L + Q+ S+ +E N P+FI +L
Sbjct: 44 LFNRLLHK---NNPIPPAIEFGKILGSLLKAKQYQTALSLSQQME--FNGIKPDFITCNL 98
Query: 123 I-KTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILN-CM--------------INDG 164
+ ++ + S ++F KI K + + V F I I C+ + G
Sbjct: 99 LMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG 158
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF---GMVDYTNVIRSLVKKEK 221
F +D + +++ +C E VQ ++++ +V Y+ +I S+ K +
Sbjct: 159 FQLDQVSYGTLINGLCR-----VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKL 213
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V DA + +M S I PD+V Y+ +++G V A +LF+ ++ + P+VYT+++
Sbjct: 214 VNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSI 273
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+G CK+ V ++A M + K DV+TYN+L+ C V+++N+ + L M +G
Sbjct: 274 LIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG 333
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ ++ +YSIMI+G + EA L EE K + ++ + GLC+ G AL
Sbjct: 334 VTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCAL 393
Query: 402 ELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
EL+ +M D+ P + +L ++ K + V+ + + L
Sbjct: 394 ELVDEMHDRG-QPSNIITYNSILDAICKNNHVDKAIVLL 431
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 100/182 (54%), Gaps = 18/182 (9%)
Query: 163 DGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
DG C G+T C+L L V EM G ++ Y +++ ++ K
Sbjct: 381 DGLCKSGRTSCALEL-----------------VDEMHDRGQPSNIITYNSILDAICKNNH 423
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V A+ +L ++K GI+PDI YT+++NG+ A+++F++LLV G P++YTY
Sbjct: 424 VDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
ING C + + G+ M++ M++ G P+ ITY L+ +L + E ++ +L++EM +G
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543
Query: 342 IV 343
++
Sbjct: 544 LL 545
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ +V A + N M G D + S++++ C+ + + DE + +EM +
Sbjct: 316 VKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV--DEAMKLFEEMHCKQIFPNV 373
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y +++ L K + AL ++++M G +I+ Y +L+ + KA L +
Sbjct: 374 VTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTK 433
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ PD++TY V INGLCK ++ K+ + G P++ TY +L+ C
Sbjct: 434 IKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGF 493
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ ++ +MK G + N TY I+I L K + +A LL E + +GL
Sbjct: 494 FDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 120/229 (52%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM++ G V YT +I + + DAL + ++M + G D+V Y LNG+ +
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ + A+ LF+E++ G+VPD YT+ I G CK N++ + + M KPD +TY
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTL+ CK E+ R +EL +M K I+ + +Y +++G S G + EA L ++ L
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KG+ + I G C+ G + KA E L +M + P + + L+
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 160/329 (48%), Gaps = 19/329 (5%)
Query: 112 FETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAI 154
F + I+ L++TY A + ++ F + + R V A
Sbjct: 183 FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
EI ++ G ++ T +++++++C+ R + ++ F+ +M+ G +V Y +I
Sbjct: 243 EIYGEVVRGGIELNVYTLNIMVNALCKDRKF--ENVMFFLSDMEGKGVFADIVTYNTLIN 300
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+ ++ V +A +LN S G++P ++ Y +L G+ Y +A+++ E+L LGL P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ TYN + +C+++N+ ++ M G PD++++++L+ L + L +
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+EM+ GIV + Y+I+IDG G + +A + +E L +G ++ + GLC++
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
+ A L +M ++ + P + L+
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLI 509
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 153/293 (52%), Gaps = 4/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ + M+ G +D T + L+ +C+++ + ++L EM + G +T +
Sbjct: 451 ALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML--FNEMVERGMVPDFYTFTTL 508
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
IR K + AL + M +KPD V Y +++G + +A+EL+D+++ +
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI 568
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD +Y +NG C + + + M E G +P+++T NTL++ C+ ++ + E
Sbjct: 569 IPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYE 628
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M GI+ + +Y+ +IDG + ++ +A L+ E +GL ++ + G C
Sbjct: 629 YLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFC 688
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
G +++A ++L++M + ++P + +L+ VS+ D + +F R D++L
Sbjct: 689 AEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQ-DNMKEAF-RFHDEML 739
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 140/299 (46%), Gaps = 27/299 (9%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFY 140
Y+ + L + F D + + + +R P+F F LI+ Y ++NLF
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERG--MVPDFYTFTTLIRGYCKDGNMDKALNLFE 526
Query: 141 KIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
+ + + ++V + N +I DGFC G+ + ++L D M
Sbjct: 527 AMVRTNLKPDKVTY-----NTLI-DGFCKAGE--------MGRAKELWDD--------MI 564
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
+ + Y V+ + +AL + +QM GI+P++V ++ G D
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
KA E +++ G++PD ++YN I+G K+ N+E +I ME+ G + ++ITYN +L
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
C ++ +++++M GI + TYS +I+G S+ ++ EA +E L +GL
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGL 743
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ N M+ G D T + ++ C +D + D+ L + M + V Y +I
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYC--KDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K ++ A + + M I PD + Y VLNG +A L D++L G+ P+
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ T N I G C+ ++ + ++ M G PD +YNTL+ K L + L+
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILIN 666
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM+ +G+ N+ TY+++++G ++G + EA +L + + G+ + + I G +
Sbjct: 667 EMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQD 726
Query: 396 LVRKALELLKQMADKDVSPGAR 417
+++A +M + + P R
Sbjct: 727 NMKEAFRFHDEMLQRGLVPDDR 748
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 14/218 (6%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V V+ SL+ F ++G++ Y +++ + + + E F
Sbjct: 167 VSRVKVVESLISTCFYFGSVGLI--------------YDLLVRTYVQAKKLREGSEAFQI 212
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L G+ + N + GL + V+ ++ + G + +V T N ++ ALCK R+
Sbjct: 213 LRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRK 272
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + +M+ KG+ ++ TY+ +I+ +G + EA LL ++G+ ++
Sbjct: 273 FENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNA 332
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
+ GLC+ G +A ++L +M ++P A + LL+
Sbjct: 333 ILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLV 370
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 141/272 (51%), Gaps = 9/272 (3%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQ---RDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
+L M GF +D TC++++ S+CE+ +D+S F + M + G +V+YT
Sbjct: 95 LLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE-----FFRRMLETGTPPNVVNYTAW 149
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLG 271
I L K+ V A +L +M G+KP++ +T +++G+ +A LF +L+
Sbjct: 150 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSS 209
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+V+TY V I G C++ + ++ M E G KP+ TY TL+ CK +R
Sbjct: 210 YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 269
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL+ +MK +G + N+ TY+ +IDG KG I EA +L A ++GL + I
Sbjct: 270 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEH 329
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G + AL+L +M + P + +L+
Sbjct: 330 CKQGHITYALDLFDRMVENGCCPDIEAYTSLI 361
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 136/301 (45%), Gaps = 4/301 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +L M+ G + T + ++ +C + + F++ +K + + YT +
Sbjct: 162 AFHVLEEMVGRGLKPNVYTHTTLIDGLC-KIGWTERAFRLFLKLIKSSSYKPNVHTYTVM 220
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I ++ K+ A +L +M G+KP+ YT ++ G + +A EL +++ G
Sbjct: 221 IGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGF 280
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P++YTYN I+G CK+ ++ K++ G K D ITY L+ CK + +
Sbjct: 281 LPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALD 340
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L M G +++ Y+ +I + + E+ ++ L GL + I G C
Sbjct: 341 LFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYC 400
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ G AL + ++M + + AL+ L S+L+ + ++D+ L PC+
Sbjct: 401 KVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRL-VPCE 459
Query: 451 M 451
+
Sbjct: 460 V 460
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A ++ +M+S G+ + VL + +V A ++FD + G+ P + +
Sbjct: 21 EAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALV 80
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
C++ VE ++A M G D T ++++LC+ + E + M G
Sbjct: 81 VVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTP 140
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ Y+ IDGL + + +A +LEE + +GL I GLC+ G +A L
Sbjct: 141 PNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRL 200
Query: 404 -LKQMADKDVSPGARVWEALLLSSV--SKLDFVNTSFIRLVDQIL 445
LK + P + ++ KL +R+V+Q L
Sbjct: 201 FLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGL 245
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 54/265 (20%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-------GFCFG 205
A E++N M +GF + T + ++ C++ G +QE K+ G F
Sbjct: 268 AFELMNKMKQEGFLPNIYTYNAVIDGFCKK---------GKIQEAYKVLRMATSQGLKFD 318
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ YT +I K+ + AL + ++M +G PDI YT +++ Q ++++ FD
Sbjct: 319 KITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFD 378
Query: 266 ELLVLGLVP-----------------------------------DVYTYNVYINGLCKQN 290
+ L++GL+P D TY I+GLCK++
Sbjct: 379 KCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKES 438
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+E + M + P +T TL C+ + + ++ + + V T
Sbjct: 439 RLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQV---HTVD 495
Query: 351 IMIDGLASKGDIIEACGLLEEALNK 375
+++ L++ GD+ A L++ L++
Sbjct: 496 VVVRKLSALGDVDAASLFLKKVLDE 520
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ +A+++ + M+ +G C D + + ++S+ C+QR + +E F + +G
Sbjct: 333 GHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQM--EESQKFFDKCLMIGLLPTKQ 390
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT++I K + AL + +M +G D + Y +++G+ + +A+ L++ +
Sbjct: 391 TYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGM 450
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L LVP T C++ + + ++ L + V T + +++ L + ++
Sbjct: 451 LDKRLVPCEVTRVTLTFEYCRREKTSIAVSV---LDRLDKRQQVHTVDVVVRKLSALGDV 507
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMID 354
+ +K++ + ++ TY+ I+
Sbjct: 508 DAASLFLKKVLDEDYAVDHATYTGFIN 534
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 165/334 (49%), Gaps = 26/334 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSV 136
P Y +I L ++ +F + VL+ E + + TP+ F + LI A + ++
Sbjct: 160 PNVVTYSALIDGLCKSQKFLEAKEVLE--EMKASGVTPDAFTYSALIHGLCKADKIEE-- 215
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
A ++L M G D S I+ + C+ L E +QE
Sbjct: 216 ----------------AEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL--EAQKTLQE 257
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG-IKPDIVCYTMVLNGVIVQE 255
M+K +V Y VI L K K+ +A IL+QM+ G + PD+V Y+ V+NG+ +
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
V+A++L D + G PDV TY I+GLCK +E ++ M+ G P+V+TY
Sbjct: 318 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 377
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN- 374
TL+ LCK R+++ +++EM+ G NL TY+ M++GL G I EA L++ +
Sbjct: 378 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG 437
Query: 375 KGLCTQSSMFDETIC-GLCQRGLVRKALELLKQM 407
+ C+ + TI L LV++A +LL+QM
Sbjct: 438 RAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 5/274 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M G D T S ++ +C+ + E + ++ M G +V Y+++
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQM--LRRMAGSGCTPDVVVYSSI 238
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG- 271
I + K K+ +A L +M+ PD+V Y V++G+ +A+ + D++ G
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGD 298
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
++PDV TY+ INGLCK + + K++ M + G PDV+TY T++ LCK L
Sbjct: 299 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 358
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L++ MK G N+ TY+ +I GL + EA ++EE N G ++ + GL
Sbjct: 359 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 418
Query: 392 CQRGLVRKALELLKQMAD--KDVSPGARVWEALL 423
C G +++A +L+++M D + SP A + ++
Sbjct: 419 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 452
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L M + GF D T + I++++ DL G + ++ +G +V YT +
Sbjct: 9 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD-----GAMDHLRSMGCDPNVVTYTAL 63
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + +K+ +A+ +L +M+ G P++V Y ++++ + A+++ +++ G
Sbjct: 64 IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 123
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V T+N ++G CK+ NV+ K++ M G +P+V+TY+ L+ LCK ++ +E
Sbjct: 124 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 183
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+++EMK G+ + TYS +I GL I EA +L G ++ I C
Sbjct: 184 VLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 243
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + +A + L++M + SP + ++
Sbjct: 244 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVI 274
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 177/349 (50%), Gaps = 31/349 (8%)
Query: 80 PEAY-HFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVN 137
P+A+ H I T N+ D+ +DH+ R P + + LI +A A + ++++
Sbjct: 23 PDAFTHTPIITAMANAG--DLDGAMDHL--RSMGCDPNVVTYTALIAAFARAKKLEEAMK 78
Query: 138 LFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
L ++ + N V + + + D C LS V +D+ V+
Sbjct: 79 LLEEMRERGCPPNLVTYNVLV------DALCK--------LSMVGAAQDV--------VK 116
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M + GF ++ + +++ K+ V DA +L M + G++P++V Y+ +++G+ +
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+++A+E+ +E+ G+ PD +TY+ I+GLCK + +E +M+ M G PDV+ Y+
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+++ A CK +L ++ ++EM+ + ++ TY+ +IDGL G I EA +L++
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
Query: 376 G-LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + + I GLC+ ++ +A +LL +M +P + ++
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 345
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 159/336 (47%), Gaps = 28/336 (8%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI----FIDLIKTYADAHR 131
C P + ++ L + + ++LD + EN P+ I F+D + D
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMV--ENGLQPDQITYGTFVDGMCKMGDT-- 233
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
++NL K+ + I+ + + I + +I DG C DG+ SD
Sbjct: 234 -VSALNLLRKMEE--ISHIKPNVVIYSAII-DGLCKDGR---------------HSDSHN 274
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
F+ EM+ G +V Y +I + A +L +M I P++V Y ++N
Sbjct: 275 LFI-EMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ + + +A EL+DE+L G++P+ TYN I+G CKQ+ ++A M M G PDV
Sbjct: 334 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 393
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
T+ TL+ C + ++ EL+ EM +G+V N TY+ +I G GD+ A L ++
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
++ G+C + + GLC G ++ ALE+ K M
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSL 174
F F LI Y A R D + L +++P+ + N V + N +I+ GFC+ G
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY-----NTLIH-GFCLVG----- 442
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
DL++ L Q+M G C +V ++ L K+ DAL + M+
Sbjct: 443 ---------DLNA--ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 235 -----------DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+G++PD++ Y +++ G+I + +++AEEL++E+ G+VPD TY+ I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+GLCKQ+ ++ +M M P+V+T+NTL+ CK ++ EL EM +GIV
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ Y +I G G+I A + +E ++ G+ + + G + + +A+ +
Sbjct: 612 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671
Query: 404 LKQM 407
L+ +
Sbjct: 672 LEDL 675
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 167/395 (42%), Gaps = 70/395 (17%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y + + + ++L +E+ + + I+ +I R DS
Sbjct: 214 QPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSH 273
Query: 137 NLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
NLF ++ I N V + NCMI GFC+ G+ + QR +
Sbjct: 274 NLFIEMQDKGIFPNIVTY-----NCMIG-GFCISGRWSA-------AQR---------LL 311
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
QEM + +V Y +I + VK+ K F+A + ++M GI P+ + Y +++G Q
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK------ 308
+ AE++F + G PDV+T+ I+G C ++ G++++ M G
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Query: 309 -----------------------------PDVITYNTLLQALCKVRELNRLRELVKEMK- 338
PD++T NTLL LC +L E+ K M+
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 339 ----------WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ G+ ++ TY+I+I GL ++G +EA L EE ++G+ + + I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC++ + +A ++ M K SP + L+
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 139/299 (46%), Gaps = 18/299 (6%)
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+N F K KF A E+ + M+ G + T + ++ C+Q L + E + ++
Sbjct: 330 INAFVKEGKFFE-----AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
K G + +T +I +++ D + +L++M G+ + V Y +++G +
Sbjct: 385 ATK--GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 442
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL---------- 305
D A +L +++ G+ PD+ T N ++GLC ++ ++M M++
Sbjct: 443 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPF 502
Query: 306 -GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G +PDV+TYN L+ L + EL +EM +GIV + TYS MIDGL + + E
Sbjct: 503 NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A + +K F+ I G C+ G V LEL +M + + A ++ L+
Sbjct: 563 ATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 129/259 (49%), Gaps = 7/259 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ Q+M++ + +T +I+ K+ AL ++ G+ PD+V +T +
Sbjct: 98 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTL 157
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ + +A +LF ++ PDV T+ +NGLC++ V + ++ M E G
Sbjct: 158 LHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGL 213
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMK-WKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+PD ITY T + +CK+ + L+++M+ I N+ YS +IDGL G ++
Sbjct: 214 QPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSH 273
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
L E +KG+ ++ I G C G A LL++M ++ +SP + AL+ +
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333
Query: 427 VSKLDFVNTSFIRLVDQIL 445
V + F + L D++L
Sbjct: 334 VKEGKFFEAA--ELYDEML 350
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 13/293 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R+ A ++ M G D T + ++ C + + D+ + + EM + G V
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI--DDGMELLHEMPRRGLVANTV 429
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + AL + QM S G+ PDIV +L+G+ A E+F +
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
G+ PDV TYN+ I GL + ++ M G PD ITY++
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M K N+ T++ +I+G G + + L E +G
Sbjct: 550 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 609
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + ++ I G + G + AL++ ++M V P +L SK
Sbjct: 610 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +LF ++L +P V +N + + + + I + ME + D+ ++ L++
Sbjct: 65 AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
C +L ++ G+ ++ T++ ++ GL + EA L + + T
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLT 184
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+++ + GLC+ G V +A+ LL +M + + P
Sbjct: 185 FTTLMN----GLCREGRVVEAVALLDRMVENGLQP 215
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 157/356 (44%), Gaps = 21/356 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L + C P +++ +I L + S+ V +E ++ + + LI
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD-IPPDSWSYGILIDGL 195
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A A + ++ LF + M++ G T ++++ +C L
Sbjct: 196 AKAGKLNEAYKLFQR------------------MLDSGITPSAVTYNVVIHGMCLAYTL- 236
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE L + M+ G + +I + K+ K+ +A +L +M DG PD+V Y+
Sbjct: 237 -DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ A L ++++ P V T N I+GLCK ++ +++ M G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PDV+TYNTL+ C+ + R REL+ +M +G+ N+ TY+ ++ GL + EAC
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
G+ + + G + I G C G V L+L +M +SP V+ L
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 166/378 (43%), Gaps = 22/378 (5%)
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI- 120
++ LLHS P AY +I L + F D + + +R +P +
Sbjct: 31 NLFQKLLHS----GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVM 86
Query: 121 --------------DLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMINDGF 165
DLIK + D V + + +RV A+ + N M G
Sbjct: 87 IDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGC 146
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
+ ++ + I+ +C+Q + D+ EM+ Y +I L K K+ +A
Sbjct: 147 TPNRRSHNTIILGLCQQSKI--DQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ +M GI P V Y +V++G+ + +A ELF + G P +T+N+ I+
Sbjct: 205 YKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
CK+ ++ +++ M + G PDV+TY+TL+ LC + ++ R L+++M +
Sbjct: 265 HCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPT 324
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ T + +I GL G I EA +L+ ++ G ++ + G C+ G +A ELL
Sbjct: 325 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 384
Query: 406 QMADKDVSPGARVWEALL 423
M + ++P + AL+
Sbjct: 385 DMVARGLAPNVVTYTALV 402
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 109/215 (50%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K+ DA + ++ G+ P V YT +++G+ + + A ELF ++
Sbjct: 13 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P TYNV I+ CK+ +E +I M E G PDV+TYNT++ LCK +
Sbjct: 73 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L EM+ G N ++++ +I GL + I +AC + E K + S + I
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + G + +A +L ++M D ++P A + ++
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 22/312 (7%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
LI A A + D+ NLF K+ + A L G C + +S +
Sbjct: 16 LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLI----HGLC--------MANSFDD 63
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
R+L +D M + G V Y +I + K+ + +A ++ +M DG PD+
Sbjct: 64 ARELFAD--------MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDV 115
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V Y V++G+ +A LF+E+ LG P+ ++N I GLC+Q+ ++ ++
Sbjct: 116 VTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE 175
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
ME PD +Y L+ L K +LN +L + M GI + TY+++I G+
Sbjct: 176 MEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ EA L + +KG F+ I C+RG + +A LLK+M D P +
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 422 LL--LSSVSKLD 431
L+ L S++++D
Sbjct: 296 LISGLCSIARVD 307
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 2/214 (0%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M + PD Y ++++G+ A LF +LL G+ P Y I+GLC N+
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ ++ A M G P +TYN ++ A CK L +L+K+M G V ++ TY+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
++DGL + EA L E G + I GLCQ+ + +A ++ +M KD
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 412 VSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ P + + L+ L+ KL+ F R++D
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDS 214
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 154/373 (41%), Gaps = 24/373 (6%)
Query: 75 NCEPPPEAYHFVI----------------KTLAENSQFCDI---SSVLDHIEKRENFETP 115
C P P Y+ +I K + E+ D+ ++V+D + K E
Sbjct: 75 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 134
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
+F ++ + +R + + + +I++ A ++ + M D + ++
Sbjct: 135 LLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQ---ACQVFHEMEAKDIPPDSWSYGIL 191
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ + + L +E Q M G V Y VI + + +AL + M+S
Sbjct: 192 IDGLAKAGKL--NEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G +P + ++++ + +A L + G VPDV TY+ I+GLC V+
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ M + KP V+T NTL+ LCK + RE++ M G ++ TY+ ++ G
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G A LL + + +GL + + GLC+ + +A + QM +P
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 416 ARVWEALLLSSVS 428
+ AL+L S
Sbjct: 430 LFTYTALILGFCS 442
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 39/302 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +L M +DG D T S ++S +C + D+ +++M K +V +
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV--DDARHLLEDMVKRQCKPTVVTQNTL 331
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K ++ +A +L+ M S G PD+V Y +++G +A EL +++ GL
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391
Query: 273 VPDVYTYNVYINGLCKQNN-----------------------------------VEAGIK 297
P+V TY ++GLCK N V+ G+K
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 451
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK--WKGIVLNLQTYSIMIDG 355
+ M G PD + Y TL LCK R E+++E + + + Y +DG
Sbjct: 452 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDG 511
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L G + A G + + + G + GLC+ G +A +L+++ D
Sbjct: 512 LLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGK 571
Query: 416 AR 417
AR
Sbjct: 572 AR 573
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 175/363 (48%), Gaps = 38/363 (10%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y ++ + + ++L +E+ + + I+ +I R D+
Sbjct: 113 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQ 172
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCSLI 175
NLF ++ I I +CMIN GFC GK T S +
Sbjct: 173 NLFIEMQDKGIFP---DIVTYSCMIN-GFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGL 228
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS- 234
++++ ++ DL+S + L +QEM G C +V ++ L K+ DAL + M+
Sbjct: 229 INALVKEGDLNSAQDL--LQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKS 286
Query: 235 ----------DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+G++PD+ Y ++++G+I + +++AEEL++E+ G+VPD TY+ IN
Sbjct: 287 MMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMIN 346
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLCKQ+ ++ +M M P+++T+NTL+ CK ++ EL EM +GIV
Sbjct: 347 GLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVA 406
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N TY +I G G+I + + +E ++ G+ + + GL + +++AL +L
Sbjct: 407 NAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAML 466
Query: 405 KQM 407
+++
Sbjct: 467 EEL 469
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 27/318 (8%)
Query: 131 RFQDSVNLFYKIPK-------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
R ++++LF+++ K R RV A+ +L+ M+ DG + T I+
Sbjct: 65 RVSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 124
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+C+ D S L +++M++L +V Y+ +I L K + DA + +M+ G
Sbjct: 125 GMCKMGDTVS--ALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKG 182
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I PDIV Y+ ++NG + +A+ L E+LV + PDV T++ IN L K+ ++ +
Sbjct: 183 IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQ 242
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK-----------WKGIVLN 345
++ M G P+V+T NTLL LC +L E+ K M+ + G+ +
Sbjct: 243 DLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPD 302
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+QTY+I+I GL ++G +EA L EE ++G+ + + I GLC++ + +A ++
Sbjct: 303 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFD 362
Query: 406 QMADKDVSPGARVWEALL 423
M K SP + L+
Sbjct: 363 SMGSKSFSPNIVTFNTLI 380
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 5/229 (2%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
++ KLGF +V + ++ L +++V +AL + +QM KP++V +T ++NG+ +
Sbjct: 40 KLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREG 95
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITY 314
V+A L D ++ GL P+ TY ++G+CK + + + ++ MEEL KPDV+ Y
Sbjct: 96 RVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIY 155
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+ ++ L K + L EM+ KGI ++ TYS MI+G S G EA LL+E L
Sbjct: 156 SAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLV 215
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + F I L + G + A +LL++M V P LL
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLL 264
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 5/209 (2%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
AL ++ G P +V + +L+G+ V++ +A +LF ++ P+V T+ +N
Sbjct: 34 ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMN 89
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK-WKGIV 343
GLC++ V + ++ M E G +P+ ITY T++ +CK+ + L+++M+ I
Sbjct: 90 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ YS +IDGL G +A L E +KG+ + I G C G +A L
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDF 432
L++M + +SP + L+ + V + D
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDL 238
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D+Y++N+ I C + + + + +LG P ++T+NTLL LC ++ +L
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M +V T++ +++GL +G ++EA LL+ + GL + + G+C+
Sbjct: 74 HQMCKPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 395 GLVRKALELLKQMAD-KDVSPGARVWEALL 423
G AL LL++M + + P ++ A++
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAII 159
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 46/231 (19%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-----GFCFGMV 207
A ++L MI+ G C + TC+ +L +C+ L D L F K + F V
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLK-DALEMFKAMQKSMMDIDATHAFNGV 299
Query: 208 D-----YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y +I L+ + K +A + +M GI PD V Y+ ++NG+ Q +A +
Sbjct: 300 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQ 359
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-------------------- 302
+FD + P++ T+N I G CK V+ G+++ M
Sbjct: 360 MFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFR 419
Query: 303 ------------EEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+E+ G PD IT +L L EL R +++E++
Sbjct: 420 KVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 159/336 (47%), Gaps = 28/336 (8%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI----FIDLIKTYADAHR 131
C P + ++ L + + ++LD + EN P+ I F+D + D
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMV--ENGLQPDQITYGTFVDGMCKMGDT-- 233
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
++NL K+ + I+ + + I + +I DG C DG+ SD
Sbjct: 234 -VSALNLLRKMEE--ISHIKPNVVIYSAII-DGLCKDGR---------------HSDSHN 274
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
F+ EM+ G +V Y +I + A +L +M I P++V Y ++N
Sbjct: 275 LFI-EMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ + + +A EL+DE+L G++P+ TYN I+G CKQ+ ++A M M G PDV
Sbjct: 334 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 393
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
T+ TL+ C + ++ EL+ EM +G+V N TY+ +I G GD+ A L ++
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
++ G+C + + GLC G ++ ALE+ K M
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSL 174
F F LI Y A R D + L +++P+ + N V + N +I+ GFC+ G
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY-----NTLIH-GFCLVG----- 442
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
DL++ L Q+M G C +V ++ L K+ DAL + M+
Sbjct: 443 ---------DLNA--ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 235 -----------DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+G++PD++ Y +++ G+I + +++AEEL++E+ G+VPD TY+ I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+GLCKQ+ ++ +M M P+V+T+NTL+ CK ++ EL EM +GIV
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ Y +I G G+I A + +E ++ G+ + + G + + +A+ +
Sbjct: 612 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671
Query: 404 LKQM 407
L+ +
Sbjct: 672 LEDL 675
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 167/395 (42%), Gaps = 70/395 (17%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y + + + ++L +E+ + + I+ +I R DS
Sbjct: 214 QPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSH 273
Query: 137 NLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
NLF ++ I N V + NCMI GFC+ G+ + QR +
Sbjct: 274 NLFIEMQDKGIFPNIVTY-----NCMIG-GFCISGRWSA-------AQR---------LL 311
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
QEM + +V Y +I + VK+ K F+A + ++M GI P+ + Y +++G Q
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK------ 308
+ AE++F + G PDV+T+ I+G C ++ G++++ M G
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Query: 309 -----------------------------PDVITYNTLLQALCKVRELNRLRELVKEMK- 338
PD++T NTLL LC +L E+ K M+
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 491
Query: 339 ----------WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ G+ ++ TY+I+I GL ++G +EA L EE ++G+ + + I
Sbjct: 492 SKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC++ + +A ++ M K SP + L+
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 139/299 (46%), Gaps = 18/299 (6%)
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+N F K KF A E+ + M+ G + T + ++ C+Q L + E + ++
Sbjct: 330 INAFVKEGKFFE-----AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 384
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
K G + +T +I +++ D + +L++M G+ + V Y +++G +
Sbjct: 385 ATK--GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 442
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL---------- 305
D A +L +++ G+ PD+ T N ++GLC ++ ++M M++
Sbjct: 443 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPF 502
Query: 306 -GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G +PDV+TYN L+ L + EL +EM +GIV + TYS MIDGL + + E
Sbjct: 503 NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A + +K F+ I G C+ G V LEL +M + + A ++ L+
Sbjct: 563 ATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 129/259 (49%), Gaps = 7/259 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ Q+M++ + +T +I+ K+ AL ++ G+ PD+V +T +
Sbjct: 98 DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTL 157
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ + +A +LF ++ PDV T+ +NGLC++ V + ++ M E G
Sbjct: 158 LHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGL 213
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMK-WKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+PD ITY T + +CK+ + L+++M+ I N+ YS +IDGL G ++
Sbjct: 214 QPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSH 273
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
L E +KG+ ++ I G C G A LL++M ++ +SP + AL+ +
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333
Query: 427 VSKLDFVNTSFIRLVDQIL 445
V + F + L D++L
Sbjct: 334 VKEGKFFEAA--ELYDEML 350
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 13/293 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R+ A ++ M G D T + ++ C + + D+ + + EM + G V
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI--DDGMELLHEMPRRGLVANTV 429
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + AL + QM S G+ PDIV +L+G+ A E+F +
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 268 L-----------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
G+ PDV TYN+ I GL + ++ M G PD ITY++
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK L+ ++ M K N+ T++ +I+G G + + L E +G
Sbjct: 550 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 609
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + ++ I G + G + AL++ ++M V P +L SK
Sbjct: 610 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +LF ++L +P V +N + + + + I + ME + D+ ++ L++
Sbjct: 65 AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
C +L ++ G+ ++ T++ ++ GL + EA L + + T
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLT 184
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+++ + GLC+ G V +A+ LL +M + + P
Sbjct: 185 FTTLMN----GLCREGRVVEAVALLDRMVENGLQP 215
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 203/452 (44%), Gaps = 71/452 (15%)
Query: 48 TPPTKQQQQIPKQPHILSSLLH------SFSI--YNCEPPP------EAYHFVIKTLAEN 93
TPP K Q ++S + H +F I Y + P + YH +I L+
Sbjct: 3 TPPIKPWPQRLYPKRLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRA 62
Query: 94 SQFCDISSVLDHIEKRE-NFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK-FRINRVG 151
F + S+L + + + + + +FI +I+ Y A R + ++ F +I + F +
Sbjct: 63 RAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQP-- 120
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
++++LN ++N V K L+ S++ +D K G + +
Sbjct: 121 -SVKLLNTLLN--VFVQNKRYHLVGSTLKNCKD--------------KYGVLPNVFSFNI 163
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I++L KK V +AL + ++M + G+ P++V YT +L G + + D V AE++F E+ G
Sbjct: 164 LIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKG 223
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+PD TY V + G CKQ + IK++ ME G +P+ +TY ++ A CK ++ R
Sbjct: 224 WLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEAR 283
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG--------------L 377
L+ +M K + + +ID L G + AC L + L K L
Sbjct: 284 NLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWL 343
Query: 378 CTQS------SMFDE--------------TICGLCQRGLVRKALELLKQMADKDVSPGAR 417
C + +FDE I G+C+RG + +A L M +K P A
Sbjct: 344 CKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAF 403
Query: 418 VWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+ +L+ K V +R+++++L+ C
Sbjct: 404 TYN-MLIKGFMKAGVVKEG-VRILEEMLDNGC 433
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 120/229 (52%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM++ G V YT +I + + DAL + ++M + G D+V Y LNG+ +
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ + A+ LF+E++ G+VPD YT+ I G CK N++ + + M KPD +TY
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTL+ CK E+ R +EL +M K I+ + +Y +++G S G + EA L ++ L
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KG+ + I G C+ G + KA E L +M + P + + L+
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 160/329 (48%), Gaps = 19/329 (5%)
Query: 112 FETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAI 154
F + I+ L++TY A + ++ F + + R V A
Sbjct: 183 FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
EI ++ G ++ T +++++++C+ R + ++ F+ +M+ G +V Y +I
Sbjct: 243 EIYGEVVRGGIELNVYTLNIMVNALCKDRKF--ENVMFFLSDMEGKGVFADIVTYNTLIN 300
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+ ++ V +A +LN S G++P ++ Y +L G+ Y +A+++ E+L LGL P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ TYN + +C+++N+ ++ M G PD++++++L+ L + L +
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+EM+ GIV + Y+I+IDG G + +A + +E L +G ++ + GLC++
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
+ A L +M ++ + P + L+
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLI 509
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 153/293 (52%), Gaps = 4/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ + M+ G +D T + L+ +C+++ + ++L EM + G +T +
Sbjct: 451 ALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML--FNEMVERGMVPDFYTFTTL 508
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
IR K + AL + M +KPD V Y +++G + +A+EL+D+++ +
Sbjct: 509 IRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDI 568
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD +Y +NG C + + + M E G +P+++T NTL++ C+ ++ + E
Sbjct: 569 IPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYE 628
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M GI+ + +Y+ +IDG + ++ +A L+ E +GL ++ + G C
Sbjct: 629 YLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFC 688
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
G +++A ++L++M + ++P + +L+ VS+ D + +F R D++L
Sbjct: 689 AEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQ-DNMKEAF-RFHDEML 739
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 140/299 (46%), Gaps = 27/299 (9%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFY 140
Y+ + L + F D + + + +R P+F F LI+ Y ++NLF
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERG--MVPDFYTFTTLIRGYCKDGNMDKALNLFE 526
Query: 141 KIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
+ + + ++V + N +I DGFC G+ + ++L D M
Sbjct: 527 AMVRTNLKPDKVTY-----NTLI-DGFCKAGE--------MGRAKELWDD--------MI 564
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
+ + Y V+ + +AL + +QM GI+P++V ++ G D
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
KA E +++ G++PD ++YN I+G K+ N+E +I ME+ G + ++ITYN +L
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
C ++ +++++M GI + TYS +I+G S+ ++ EA +E L +GL
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGL 743
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ N M+ G D T + ++ C +D + D+ L + M + V Y +I
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYC--KDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K ++ A + + M I PD + Y VLNG +A L D++L G+ P+
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ T N I G C+ ++ + ++ M G PD +YNTL+ K L + L+
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILIN 666
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM+ +G+ N+ TY+++++G ++G + EA +L + + G+ + + I G +
Sbjct: 667 EMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQD 726
Query: 396 LVRKALELLKQMADKDVSPGAR 417
+++A +M + + P R
Sbjct: 727 NMKEAFRFHDEMLQRGLVPDDR 748
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 14/218 (6%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V V+ SL+ F ++G++ Y +++ + + + E F
Sbjct: 167 VSRVKVVESLISTCFYFGSVGLI--------------YDLLVRTYVQAKKLREGSEAFQI 212
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L G+ + N + GL + V+ ++ + G + +V T N ++ ALCK R+
Sbjct: 213 LRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRK 272
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + +M+ KG+ ++ TY+ +I+ +G + EA LL ++G+ ++
Sbjct: 273 FENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNA 332
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
+ GLC+ G +A ++L +M ++P A + LL+
Sbjct: 333 ILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLV 370
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 183/398 (45%), Gaps = 68/398 (17%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVN-LFYKIPKFRI-----------------NRV 150
+ + E + L+ DA R ++++ L ++P+F RV
Sbjct: 118 KTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRV 177
Query: 151 GFAIEILNCMINDGFCVDGKTCS-------LILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
A+E+L+ M DG G C+ I+ +C+ + + E G +Q M G
Sbjct: 178 EEALELLHTMAEDG----GGNCTPNVVTYNTIIDGLCKAQAVDRAE--GVLQHMIDKGVK 231
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y+ +I L K + V A G+L M G+KPD+V Y +++G+ + +AE +
Sbjct: 232 LDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGV 291
Query: 264 FDELLVLGLVPDVYTYNVYINGLCK---------------QNNVEAGIKMIACM------ 302
++ G+ PDV TYN I+GLCK +V+ I+ C+
Sbjct: 292 LQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLS 351
Query: 303 -----------EEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
EE+ G PDV+TY+ LL LCK + R++ M KGI N+
Sbjct: 352 TGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTI 411
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y I++ G A++G I + LL+ + G+ + +F+ +C ++ ++ +A+ + +M+
Sbjct: 412 YGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMS 471
Query: 409 DKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+SP + +L+ ++ KL V+ + ++ +Q++N
Sbjct: 472 QHGLSPDVVTY-GILIDALCKLGRVDDAVLKF-NQMIN 507
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 4/290 (1%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L MI+ G D T + I+ +C+ + + E G +Q M G +V Y +I
Sbjct: 256 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAE--GVLQHMIDKGVKPDVVTYNTIIDG 313
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K + V A G+L M +KPDI Y +++G + ++ + +E+ GL PD
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPD 373
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V TY++ ++ LCK K+ CM G KP+V Y LL + L +L+
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M GI N ++I++ A K I EA + GL + I LC+ G
Sbjct: 434 LMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLG 493
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
V A+ QM + V+P + V+ +L+ L +V + + F + DQ
Sbjct: 494 RVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ 543
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 141/287 (49%), Gaps = 11/287 (3%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++L+ M+ +G + +++L + ++ + DE + M + G +V Y +I
Sbjct: 430 DLLDLMVANGISPNNYIFNIVLCAYAKKAMI--DEAMHIFSRMSQHGLSPDVVTYGILID 487
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L K +V DA+ NQM +DG+ P+ V + ++ G+ + + KAEELF E+ G+ P
Sbjct: 488 ALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRP 547
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+V +N + LC + V ++I ME +G +P+VI+YNTL+ C + +L+
Sbjct: 548 NVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLL 607
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M G+ +L +Y ++ G G I A L E L KG+ + + + GL
Sbjct: 608 DVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHT 667
Query: 395 GLVRKALELLKQMADKDVSPGARVWEA----LLLSSVSKLDFVNTSF 437
+A EL M + G + W+ ++L+ + K + V+ +F
Sbjct: 668 RRFSEAKELYLNM----IKSGQQ-WDIYTYNIILNGLCKTNCVDEAF 709
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 155/355 (43%), Gaps = 20/355 (5%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y ++ A D++ +LD + +IF ++ YA +++
Sbjct: 406 KPNVTIYGILLHGYAARGAIADLTDLLD-LMVANGISPNNYIFNIVLCAYAKKAMIDEAM 464
Query: 137 NLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
++F ++ + ++ RV A+ N MINDG + + ++ +
Sbjct: 465 HIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGL 524
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C E L F EM G +V + ++ +L + +V A +++ M+ G++P
Sbjct: 525 CTVDRWEKAEELFF--EMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRP 582
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
+++ Y ++ G + +A +L D ++ +GL PD+ +Y+ + G CK ++ +
Sbjct: 583 NVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLF 642
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M G P +TY+T+LQ L R + +EL M G ++ TY+I+++GL
Sbjct: 643 REMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKT 702
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ EA + + +K L F I L + G + A++L + + P
Sbjct: 703 NCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVP 757
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 1/248 (0%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+DE + M +G ++ Y ++R K ++ +A + +M G+ P V Y+
Sbjct: 600 TDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYST 659
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+L G+ + +A+EL+ ++ G D+YTYN+ +NGLCK N V+ K+ +
Sbjct: 660 ILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKD 719
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P++IT+ ++ L K +L + G+V N+ TY IM+ + +G + E
Sbjct: 720 LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFD 779
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
L G S M + I L RG + +A L ++ + + S A +LL+S
Sbjct: 780 NLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEAST-TSLLISL 838
Query: 427 VSKLDFVN 434
S+ ++ N
Sbjct: 839 FSREEYKN 846
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E++ ++EM G +V Y+ ++ L K K +A I M GIKP++ Y ++L
Sbjct: 357 EVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILL 416
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G + +L D ++ G+ P+ Y +N+ + K+ ++ + + + M + G
Sbjct: 417 HGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLS 476
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV+TY L+ ALCK+ ++ +M G+ N ++ ++ GL + +A L
Sbjct: 477 PDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEEL 536
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E ++G+ F+ +C LC G V A L+ M V P + L+
Sbjct: 537 FFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLI 591
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 51/306 (16%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-------GMVDYTNV 212
M G D T SL+L +C+ G E +K+ +C + Y +
Sbjct: 365 MYARGLDPDVVTYSLLLDYLCKN---------GKCTEARKIFYCMIRKGIKPNVTIYGIL 415
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + + D +L+ M ++GI P+ + +VL + +A +F + GL
Sbjct: 416 LHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGL 475
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACM----------------------------EE 304
PDV TY + I+ LCK V+ + M EE
Sbjct: 476 SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEE 535
Query: 305 L-------GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
L G +P+V+ +NT++ LC ++ + L+ M+ G+ N+ +Y+ +I G
Sbjct: 536 LFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHC 595
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G EA LL+ ++ GL +D + G C+ G + A L ++M K V+PGA
Sbjct: 596 LAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAV 655
Query: 418 VWEALL 423
+ +L
Sbjct: 656 TYSTIL 661
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 39/189 (20%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR---- 329
PD+ TY++ C+ +E G + + G + + + N LL LC + ++
Sbjct: 88 PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147
Query: 330 -LR-------------------------------ELVKEMKWKG---IVLNLQTYSIMID 354
LR EL+ M G N+ TY+ +ID
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL + A G+L+ ++KG+ + I GLC+ V +A +L+ M DK V P
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267
Query: 415 GARVWEALL 423
+ ++
Sbjct: 268 DVVTYNTII 276
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 94/237 (39%), Gaps = 20/237 (8%)
Query: 115 PEFIFID-LIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEI 156
P+ I D L++ Y R ++ LF ++ + F R A E+
Sbjct: 617 PDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKEL 676
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
MI G D T ++IL+ +C+ DE Q + ++ +T +I L
Sbjct: 677 YLNMIKSGQQWDIYTYNIILNGLCKTN--CVDEAFKIFQSLCSKDLRPNIITFTIMIDVL 734
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K + DA+ + + S G+ P++V Y +++ +I + + + LF + G PD
Sbjct: 735 FKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDS 794
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
N I L + + ++ ++E+ + T + L+ + N + L
Sbjct: 795 VMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 170/373 (45%), Gaps = 25/373 (6%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY F V++ L + D VLD + + P + +++ + F++SV
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHV-ILEAACRSGGFRNSV 166
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+L M G +D C+L+L+++CEQ + DE +G +++
Sbjct: 167 ------------------RVLEAMHAKGCTLDTGNCNLVLNAICEQGCV--DEAVGLLRK 206
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G +V Y V++ L ++ D ++++M P+IV + ++ +
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ + E+ ++ G PD+ Y I+G+CK+ ++E +++ M G KP+V+ YNT
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+L+ LC EL+ EM K L+ T++I++D G + LLE+ L+ G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ I G C+ GL+ +A+ LLK M+ P + +L S +V+
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446
Query: 437 FIRLVDQILNTPC 449
L+ Q++ C
Sbjct: 447 --ELMSQMIQQGC 457
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 168/366 (45%), Gaps = 22/366 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE-NFETPEFIFIDLIKT 125
+L S C P P YH +++ + F + VL+ + + +T + +
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLV--LNA 190
Query: 126 YADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVD 168
+ ++V L K+ F R G E+++ M+ +
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + ++ +C R+ + + + +M + G + Y +I + K+ + A I
Sbjct: 251 IVTFNTLIGYLC--RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
LN+M S G+KP++VCY VL G+ E + +AEEL E+ D T+N+ ++ C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
V+ I+++ M G PDVITY T++ CK ++ L+K M G N +
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+I++ GL S G ++A L+ + + +G F+ I LC++GLV +A+ELLKQM
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 409 DKDVSP 414
SP
Sbjct: 489 VNGCSP 494
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 166/367 (45%), Gaps = 22/367 (5%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQ 133
+C P ++ +I L N F + VL + E+ TP+ ++ +I +
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS--EHGCTPDIRMYATIIDGICKEGHLE 303
Query: 134 DSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+ + ++P + + R A E+L+ M +D T ++++
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILV 363
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
C+ + D ++ +++M G ++ YT VI K+ + +A+ +L M S G
Sbjct: 364 DFFCQNGLV--DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
KP+ V YT+VL G+ +V AEEL +++ G P+ T+N IN LCK+ VE I
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G PD+I+Y+T++ L K + EL+ M KGI N YS + L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +G + + + + + + + + +++ I LC+R +A++ M P
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 417 RVWEALL 423
+ L+
Sbjct: 602 STYTMLI 608
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 56/283 (19%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
IE+L M++ G D T + +++ C++ + DE + ++ M G V YT V+
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLI--DEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
+ L + DA +++QM G P+ V + ++N + + +A EL ++LV G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP------------------------ 309
PD+ +Y+ I+GL K E ++++ M G P
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 310 -----------DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
D + YN ++ +LCK E +R + M G + N TY+++I GLAS
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+G EA LL E LC RG +RK L
Sbjct: 614 EGLAKEAQELLSE-------------------LCSRGALRKHL 637
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P+ + V+ G+ + A E+ DE+ G P Y+V + C+ +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G D N +L A+C+ ++ L++++ + G ++ +Y+ ++ GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 357 ASK---GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GD+ E L++E + F+ I LC+ GL + E+L QM++ +
Sbjct: 227 CMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT 283
Query: 414 PGARVWEALL 423
P R++ ++
Sbjct: 284 PDIRMYATII 293
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 122/227 (53%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ + M+ F V Y +I SL + K+ AL +LNQ+ SD +P ++ YT++
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ +++ +A +L DE+L GL PD++TYN I G+CK+ V+ +M+ +E GS
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGS 294
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDVI+YN LL+AL + +L+ +M + N+ TYSI+I L G I EA
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
LL+ KGL + +D I C+ G + A+E L+ M P
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++NR+ A +L+ M + F D T ++++ S+C + L D L + ++
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL--DLALKVLNQLLSDNCQPT 227
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT +I + + + V +AL ++++M S G+KPD+ Y ++ G+ + +A E+
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L + G PDV +YN+ + L Q E G K++ M P+V+TY+ L+ LC+
Sbjct: 288 NLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L+K MK KG+ + +Y +I +G + A LE ++ G ++
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ LC+ G +ALE+ ++ + SP + + +
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 174/406 (42%), Gaps = 61/406 (15%)
Query: 55 QQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET 114
+ IPK ++ +L F +P AY+ +I + ++ D + VLD + ++ F
Sbjct: 138 RNIPKAVRVME-ILEKFG----QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD-FSP 191
Query: 115 PEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSL 174
+ +I + ++ A+++LN +++D T ++
Sbjct: 192 DTVTYNIMIGSLCSR------------------GKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ + + + DE L + EM G M Y +IR + K+ V A ++ ++
Sbjct: 234 LIEATMLEGGV--DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEEL----FDE------------------------ 266
G +PD++ Y ++L ++ Q + + E+L F E
Sbjct: 292 KGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 267 ---LLVL----GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
LL L GL PD Y+Y+ I C++ ++ I+ + M G PD++ YNT+L
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK + ++ E+ ++ G N +Y+ M L S GD I A ++ E ++ G+
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++ I LC+ G+V +A ELL M + P + +LL
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 139/274 (50%), Gaps = 9/274 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD---Y 209
++ +L M+ G+ D C+ ++ R++ + + ++ ++K FG D Y
Sbjct: 108 SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIP--KAVRVMEILEK----FGQPDVFAY 161
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I K ++ DA +L++M+S PD V Y +++ + + A ++ ++LL
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
P V TY + I + V+ +K++ M G KPD+ TYNT+++ +CK ++R
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
E+V+ ++ KG ++ +Y+I++ L ++G E L+ + ++ + I
Sbjct: 282 AFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G + +A+ LLK M +K ++P A ++ L+
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S++++++C RD +E + ++ MK+ G Y +I + ++ ++ A+ L
Sbjct: 335 TYSILITTLC--RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M SDG PDIV Y VL + +A E+F +L +G P+ +YN + L
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + MI M G PD ITYN+++ LC+ ++ EL+ +M+ ++ TY+
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ G I +A +LE + G + + I G+ G +A+EL +
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Query: 411 DV 412
D
Sbjct: 573 DA 574
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+Y+++ L + ++ G PDV I G N+ ++++ +E+ G +PDV YN
Sbjct: 104 NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYN 162
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK---------------- 359
L+ CK+ ++ ++ M+ K + TY+IMI L S+
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 360 -------------------GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G + EA L++E L++GL ++ I G+C+ G+V +A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 401 LELLKQMADKDVSPGARVWEALL 423
E+++ + K P + LL
Sbjct: 283 FEMVRNLELKGSEPDVISYNILL 305
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++ M+++G D T + ++S +C R+ DE + +M+ F +V Y V
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLC--REGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ K ++ DA+ +L M +G +P+ YT+++ G+ +A EL ++L+
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 147/279 (52%), Gaps = 4/279 (1%)
Query: 149 RVGF--AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
R G+ A+++L+ M + G D T +++++ +C++ + D+ + F++ + G
Sbjct: 200 RSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRV--DDAMEFLKSLPSYGCEPNT 257
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y V++ L E+ DA ++ +M G P++V + M+++ + + A E+ D+
Sbjct: 258 VSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQ 317
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G P+ +YN ++ CKQ ++ + + M G PD+++YNTLL ALC+ E
Sbjct: 318 IPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGE 377
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ EL+ ++K KG L +Y+ +IDGL G EA LL E + KGL +
Sbjct: 378 VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYST 437
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GLC+ G + +A++ ++ D + P ++ A+LL
Sbjct: 438 ISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLG 476
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 159/315 (50%), Gaps = 21/315 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L S Y CEP +Y+ V+K L ++ D ++ + ++ P + +++ ++
Sbjct: 244 FLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKG--RPPNVVTFNMLISF 301
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R V A+EIL+ + G + + + IL + C+Q+ +
Sbjct: 302 L-----------------CRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKM- 343
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + FV+ M G +V Y ++ +L + +V A+ +L+Q+K G P ++ Y
Sbjct: 344 -DRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ +A EL +E++ GL PD+ TY+ +GLC++ +E IK ++++G
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P+ + YN +L LCK R + +L M G + N TY+I+I+GLA +G + EA
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522
Query: 367 GLLEEALNKGLCTQS 381
++ E ++G+ +++
Sbjct: 523 EMMAELCSRGVVSKT 537
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 35/241 (14%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +IR L + + +AL +L+ M G PD+V YT++L + Y +A +L DE+
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD+ TYNV +NG+C++ V+ ++ + + G +P+ ++YN +L+ LC
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG------------ 376
+L+ EM KG N+ T++++I L +G + A +L++ G
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334
Query: 377 --LCTQSSM---------------------FDETICGLCQRGLVRKALELLKQMADKDVS 413
C Q M ++ + LC+ G V A+ELL Q+ DK +
Sbjct: 335 HAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394
Query: 414 P 414
P
Sbjct: 395 P 395
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 146/320 (45%), Gaps = 22/320 (6%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+E L + + G + + +++L +C E L + EM + G +V
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKL--MAEMSRKGRPPNVV 293
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I L ++ V A+ IL+Q+ G P+ + Y +L+ Q+ +A + +
Sbjct: 294 TFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 353
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G PD+ +YN + LC+ V+A ++++ +++ G P +I+YNT++ L K +
Sbjct: 354 VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 413
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL+ EM KG+ ++ TYS + GL +G I EA + + G+ + +++
Sbjct: 414 EEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAI 473
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPG-------------------ARVWEALLLS-SV 427
+ GLC+R A++L M P AR A L S V
Sbjct: 474 LLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533
Query: 428 SKLDFVNTSFIRLVDQILNT 447
VN IRL+D ++T
Sbjct: 534 VSKTLVNKGAIRLLDGTMHT 553
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 96/187 (51%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++PD Y ++ G+ + A + D++L G VPDV TY + + CK++ + +
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K++ M + G PD++TYN ++ +C+ ++ E +K + G N +Y+I++ GL
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +A L+ E KG F+ I LC+RGLV A+E+L Q+ +P +
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNS 327
Query: 417 RVWEALL 423
+ +L
Sbjct: 328 LSYNPIL 334
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PDV +YN + G C ++ +++A M +PD TYNTL++ LC + +
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAV 174
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ +M +G V ++ TY+I+++ + +A LL+E +KG ++ + G+CQ
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
G V A+E LK + P + +L
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVL 264
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I LC +++A E PDV++YN ++ C +L+ R LV M +
Sbjct: 97 IKKLCASGRTAEARRVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEP- 150
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ TY+ +I GL +G A +L++ L +G + + C+R ++A++
Sbjct: 151 --DTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVK 208
Query: 403 LLKQMADKDVSP 414
LL +M DK +P
Sbjct: 209 LLDEMRDKGCAP 220
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 146/305 (47%), Gaps = 12/305 (3%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
D + F +N++ K+ V A + + MI G D T + + C +D+
Sbjct: 191 DIYTFNLMINVYCKM-----GFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDV-- 243
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +EM V Y +I L + ++ +A+ + +MK D P++ YT +
Sbjct: 244 DSAFRVFEEMPNRN----EVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTAL 299
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G + +++ KA L DE+L LVPD+ TYN I G C+ ++++ ++++ M+E G
Sbjct: 300 IKG-LCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGL 358
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD TY + LCK + R L + +G+ N+ YS++IDG G + EA
Sbjct: 359 VPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGC 418
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L E+ L+K + F+ I GLC G +++AL L QM + P + L+ +
Sbjct: 419 LFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRML 478
Query: 428 SKLDF 432
+ DF
Sbjct: 479 KQGDF 483
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 119/249 (47%), Gaps = 3/249 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ +CE + DE + MK + YT +I+ L +K V A+G+L++M
Sbjct: 264 LIHGLCEAGRI--DEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLE 320
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+ PD++ Y ++ G A L + GLVPD TY +I+ LCK N VE
Sbjct: 321 RNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEE 380
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ + E G +VI Y+ L+ CKV +++ L ++M K N T++ +I
Sbjct: 381 ARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIH 440
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL S G++ EA L ++ + GL F+ I + ++G A + L++M P
Sbjct: 441 GLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKP 500
Query: 415 GARVWEALL 423
AR + A +
Sbjct: 501 VARTYNAFI 509
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 148/342 (43%), Gaps = 20/342 (5%)
Query: 98 DISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK---------------- 141
D+ S E+ N E + LI +A R ++V+LF +
Sbjct: 242 DVDSAFRVFEEMPN--RNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTAL 299
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
I V A+ +L+ M+ D T + +++ C L D + MK+ G
Sbjct: 300 IKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHL--DSAYRLLSLMKERG 357
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
Y I L K +V +A + + + +G+ +++ Y+++++G +A
Sbjct: 358 LVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAG 417
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
LF+++L P+ YT+N I+GLC N++ + + M ++G KP V T+N L+ +
Sbjct: 418 CLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRM 477
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
K + + + +++M G +TY+ I+ S G + EA ++ + +G+
Sbjct: 478 LKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDD 537
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I + GL A ++LK M D D P + +L+
Sbjct: 538 FTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLI 579
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 28/252 (11%)
Query: 173 SLILSSVCEQRDLSSDEL----LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
+L +S +C R +S D++ L E+ L FG+VD N + +
Sbjct: 137 ALFVSDIC--RKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYT------------- 181
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVLGLVPDVYTYNVYINGLC 287
+M + + DI + +++N V + +VK A++ +++ GL PD +T +I G C
Sbjct: 182 --EMLEEFVSMDIYTFNLMIN-VYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYC 238
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ +V++ ++ EE+ ++ +V +YN L+ LC+ ++ L MK N+
Sbjct: 239 RSKDVDSAFRVF---EEMPNRNEV-SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVY 294
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ +I GL K ++ +A GLL+E L + L ++ I G C+ G + A LL M
Sbjct: 295 TYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLM 353
Query: 408 ADKDVSPGARVW 419
++ + P R +
Sbjct: 354 KERGLVPDQRTY 365
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%)
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
ELF+E+ G PD Y I+G+CK N+ +K++ M++ G P + +N ++
Sbjct: 622 ELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCC 681
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK+++ +V++M G L+ +I GL +G+ + ++ G
Sbjct: 682 CKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDE 741
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ I G+ ++GLV + +L ++M + R + L
Sbjct: 742 IAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ +EM+K G Y +I + K E + AL +L+QM+ +GI P + + V
Sbjct: 618 DIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAV 677
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ + Y +A + ++++ G P + I GL ++ E G + + G
Sbjct: 678 ISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGY 737
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
D I + L+ + K + +L +EM+ G + +TYSI+ L K
Sbjct: 738 NDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHGK 789
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 1/170 (0%)
Query: 208 DYTNVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
++ +V S + K FD + + +M+ G PD CY +++G+ E+ A +L D+
Sbjct: 602 NFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQ 661
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ P +N I+ CK ++ M G P + TL+ L + E
Sbjct: 662 MQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGE 721
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
R + K+++ G + + I+IDG+ +G + E L EE G
Sbjct: 722 TERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNG 771
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 114/300 (38%), Gaps = 31/300 (10%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + + M+ G T ++++ + +Q D D+ +Q+M G Y
Sbjct: 451 ALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDF--DDAHKCLQKMMSSGEKPVARTYNAF 508
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I KV +A ++ QMK +G+ PD YT ++ A ++ +
Sbjct: 509 IEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADC 568
Query: 273 VPDVYTYNVYINGLCKQNNV-----EAGIKMIAC------------------------ME 303
P +T+ I L + V E G++ ++ ME
Sbjct: 569 EPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEME 628
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ G PD Y L+ +CKV L +L+ +M+ +GI + ++ +I
Sbjct: 629 KHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYG 688
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EA ++E+ + G Q ICGL + G + + K++ + W+ L+
Sbjct: 689 EAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILI 748
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 170/373 (45%), Gaps = 25/373 (6%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY F V++ L + D VLD + + P + +++ + F++SV
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHV-ILEAACRSGGFRNSV 166
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+L M G +D C+L+L+++CEQ + DE +G +++
Sbjct: 167 ------------------RVLEAMHAKGCTLDTGNCNLVLNAICEQGCV--DEAVGLLRK 206
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G +V Y V++ L ++ D ++++M P+IV + ++ +
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ + E+ ++ G PD+ Y I+G+CK+ ++E +++ M G KP+V+ YNT
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+L+ LC EL+ EM K L+ T++I++D G + LLE+ L+ G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ I G C+ GL+ +A+ LLK M+ P + +L S +V+
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446
Query: 437 FIRLVDQILNTPC 449
L+ Q++ C
Sbjct: 447 --ELMSQMIQQGC 457
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 168/366 (45%), Gaps = 22/366 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE-NFETPEFIFIDLIKT 125
+L S C P P YH +++ + F + VL+ + + +T + +
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLV--LNA 190
Query: 126 YADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVD 168
+ ++V L K+ F R G E+++ M+ +
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + ++ +C R+ + + + +M + G + Y +I + K+ + A I
Sbjct: 251 IVTFNTLIGYLC--RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
LN+M S G+KP++VCY VL G+ E + +AEEL E+ D T+N+ ++ C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
V+ I+++ M G PDVITY T++ CK ++ L+K M G N +
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+I++ GL S G ++A L+ + + +G F+ I LC++GLV +A+ELLKQM
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 409 DKDVSP 414
SP
Sbjct: 489 VNGCSP 494
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 168/367 (45%), Gaps = 22/367 (5%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQ 133
+C P ++ +I L N F + VL + E+ TP+ ++ +I +
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS--EHGCTPDIRMYATIIDGICKEGHLE 303
Query: 134 DSVNLFYKIPKFRI--NRVGF---------------AIEILNCMINDGFCVDGKTCSLIL 176
+ + ++P + + N V + A E+L+ M +D T ++++
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILV 363
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
C+ + D ++ +++M G ++ YT VI K+ + +A+ +L M S G
Sbjct: 364 DFFCQNGLV--DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
KP+ V YT+VL G+ +V AEEL +++ G P+ T+N IN LCK+ VE I
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G PD+I+Y+T++ L K + EL+ M KGI N YS + L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +G + + + + + + + + +++ I LC+R +A++ M P
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 417 RVWEALL 423
+ L+
Sbjct: 602 STYTMLI 608
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 56/283 (19%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
IE+L M++ G D T + +++ C++ + DE + ++ M G V YT V+
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLI--DEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
+ L + DA +++QM G P+ V + ++N + + +A EL ++LV G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP------------------------ 309
PD+ +Y+ I+GL K E ++++ M G P
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 310 -----------DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
D + YN ++ +LCK E +R + M G + N TY+++I GLAS
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+G EA LL E LC RG +RK L
Sbjct: 614 EGLAKEAQELLSE-------------------LCSRGALRKHL 637
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P+ + V+ G+ + A E+ DE+ G P Y+V + C+ +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G D N +L A+C+ ++ L++++ + G ++ +Y+ ++ GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 357 ASK---GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GD+ E L++E + F+ I LC+ GL + E+L QM++ +
Sbjct: 227 CMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT 283
Query: 414 PGARVWEALL 423
P R++ ++
Sbjct: 284 PDIRMYATII 293
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 9/319 (2%)
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
YAD + VN + R V A +++CM G T + +++ +C++
Sbjct: 256 YADLVTYNTLVNAYC-----RRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEG-- 308
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
S + + EM +G C + ++ +KE V++A + N+M G+ PD++ ++
Sbjct: 309 SYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFS 368
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ + +A F+++ +GLVPD Y + ING C+ ++V +KM M E
Sbjct: 369 SIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVER 428
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G DV+TYNTLL LC+ + L+ EL KEM +G+ + T + +I G G++ +A
Sbjct: 429 GCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKA 488
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L E + L ++ + G C+ G + KA EL M +++ P + + ++L++
Sbjct: 489 LSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFP-SYISFSILIN 547
Query: 426 SVSKLDFVNTSFIRLVDQI 444
L V+ +F RL D++
Sbjct: 548 GFCSLGLVSEAF-RLWDEM 565
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 2/286 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + N M+ G D + S I+ +L L + ++MK +G V YT +
Sbjct: 348 AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELG--RALAYFEKMKGVGLVPDTVIYTIL 405
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + V AL + N+M G D+V Y +LNG+ + A+ELF E++ G+
Sbjct: 406 INGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD YT I+G CK N+ + + M KPDV+TYNTL+ CKV E+ + +E
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +M + I + ++SI+I+G S G + EA L +E KG+ + I G
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
+ G + KA + L M + V P + L+ S V + +F F+
Sbjct: 586 RAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFL 631
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 181/374 (48%), Gaps = 23/374 (6%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAEN--SQFCDISSVLDHIEKRENFETPEF 117
P I+++L+H + + PEA +++ + ++ S I S++ N
Sbjct: 98 NPSIIATLIHF--LVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVV 155
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCM 160
+F LI+TY A + ++ F + K ++ V A ++
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
+ G V+ T +++++++C+ L D + ++ EM++ G +V Y ++ + ++
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKL--DNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
V +A G+++ M G+KP + Y ++NG+ + Y +A+ + DE+L +GL P+ T+N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+ C++ +V ++ M + G PD+I++++++ + EL R ++MK
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G+V + Y+I+I+G D+ A + E + +G ++ + GLC+ ++ A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453
Query: 401 LELLKQMADKDVSP 414
EL K+M ++ V P
Sbjct: 454 DELFKEMVERGVFP 467
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 149/301 (49%), Gaps = 6/301 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCF 204
R + V A+++ N M+ G +D T + +L+ +C + L +DEL +EM + G
Sbjct: 411 RNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF---KEMVERGVFP 467
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
T +I K + AL + M +KPD+V Y +++G + KA+EL+
Sbjct: 468 DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELW 527
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ + P ++++ ING C V ++ M+E G KP ++T NT+++ +
Sbjct: 528 YDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRA 587
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L++ + + M +G+ + TY+ +I+ + + A L+ +GL +
Sbjct: 588 GNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTY 647
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ + G + G +++A +L +M DK ++P + +L+ VSK D + +F R+ D++
Sbjct: 648 NAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSK-DNMKEAF-RVHDEM 705
Query: 445 L 445
L
Sbjct: 706 L 706
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 164 GFCVDGK-TCSLILSSVCEQRDLSSDELL------GF--VQEMKKLGFCF---------- 204
G+C DG T +L L R L D + GF V EM+K +
Sbjct: 478 GYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFP 537
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ ++ +I V +A + ++MK GIKP +V ++ G + + KA +
Sbjct: 538 SYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFL 597
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ ++ G+ PD TYN IN K+ N + +I MEE G P+++TYN +L +
Sbjct: 598 NTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRH 657
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ ++ +M KGI + TY+ +I+G SK ++ EA + +E L +G
Sbjct: 658 GRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGF 710
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 115/258 (44%), Gaps = 2/258 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
Q ++K GFC + ++ ++VK V A + G ++ +++N +
Sbjct: 178 QLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKD 237
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
E+ G+ D+ TYN +N C++ V ++ CM G KP + TY
Sbjct: 238 GKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTY 297
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N L+ LCK R + ++ EM G+ N T++ M+ K D+ EA + E L
Sbjct: 298 NALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQ 357
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
+G+ F + + G + +AL ++M + P ++ +L++ + D V+
Sbjct: 358 RGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIY-TILINGYCRNDDVS 416
Query: 435 TSFIRLVDQILNTPCKME 452
+ +++ ++++ C M+
Sbjct: 417 GA-LKMRNEMVERGCVMD 433
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%)
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+V + +++ + + E F L G + N + + K V+ K+
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ G+ +V T N ++ ALCK +L+ + + EM+ KG+ +L TY+ +++ +G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+ EA GL++ KGL ++ I GLC+ G +A +L +M + P A +
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 421 ALLLSSVSKLD 431
+L+ S K D
Sbjct: 334 PMLVESCRKED 344
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
TC+ I+ +LS F+ M G + Y +I S VK+E A ++N
Sbjct: 576 TCNTIIKGYLRAGNLSKAN--DFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLIN 633
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M+ G+ P++V Y +L G +AE + +++ G+ PD TY ING ++
Sbjct: 634 NMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKD 693
Query: 291 NVEAGIKMIACMEELGSKPD 310
N++ ++ M + G PD
Sbjct: 694 NMKEAFRVHDEMLQRGFVPD 713
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 173/360 (48%), Gaps = 25/360 (6%)
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK-IPK 144
+I++ A + F + +L I + EN E FI + + Y AH +V+LF++ + +
Sbjct: 83 MIESYANSGDFDSVEKLLSRI-RLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDE 141
Query: 145 FRINR-VGFAIEILNCMINDGF--------------------CVDGKTCSLILSSVCEQR 183
FR R V +LN +IN+G +G + +L++ ++C+ R
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLR 201
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+ D + + M + Y ++ L K+E++ +A+ +L++M+S+G P V
Sbjct: 202 FV--DRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y ++++G+ + D + +L D + + G VP+ TYN I+GLC + ++ + ++ M
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
P+ +TY TL+ L K R L+ M+ +G LN YS++I GL +G
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EA L + KG ++ + GLC+ G +A E+L +M P A + +L+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 4/285 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A+ +L+ M ++G ++++ +C++ DL+ + V M G V
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLT--RVTKLVDNMFLKGCVPNEVT 294
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K+ A+ +L +M S P+ V Y ++NG++ Q A L +
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G + + Y+V I+GL K+ E + + M E G KP+++ Y+ L+ LC+ + N
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+E++ M G + N TYS ++ G G EA + +E G + I
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
GLC G V++A+ + +M + P + +++ L + +D
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/430 (20%), Positives = 181/430 (42%), Gaps = 81/430 (18%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL C P P Y+ +I L + ++ ++D++ + E + LI
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN-EVTYNTLIHGL 302
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ +V+L ++ + C+ ND T +++ + +QR
Sbjct: 303 CLKGKLDKAVSLLERMVSSK------------CIPND------VTYGTLINGLVKQR--R 342
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ + + + M++ G+ Y+ +I L K+ K +A+ + +M G KP+IV Y++
Sbjct: 343 ATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV 402
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYT---------------------------- 278
+++G+ + +A+E+ + ++ G +P+ YT
Sbjct: 403 LVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Query: 279 -------YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
Y+V I+GLC V+ + + + M +G KPD + Y+++++ LC + ++
Sbjct: 463 CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAAL 522
Query: 332 ELVKEM---KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL----------- 377
+L EM + ++ TY+I++DGL + DI A LL L++G
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582
Query: 378 ---------CTQS-SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
C + S +E + L +R V A +++ M K ++P W A+++ +
Sbjct: 583 NTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTW-AMIVREI 641
Query: 428 SKLDFVNTSF 437
K +N +
Sbjct: 642 CKPKKINAAI 651
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 157/363 (43%), Gaps = 49/363 (13%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C P Y +I L + + D +L +E+R + + I+ LI
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER-GYHLNQHIYSVLISG 371
Query: 126 YADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVD 168
+ +++++L+ K+ + R + A EILN MI G +
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 169 GKTCSLIL-----SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
T S ++ + +CE E + +EM K G Y+ +I L +V
Sbjct: 432 AYTYSSLMKGFFKTGLCE-------EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL---GLVPDVYTYN 280
+A+ + ++M + GIKPD V Y+ ++ G+ A +L+ E+L PDV TYN
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC-KVRELNRLRELVKEMKW 339
+ ++GLC Q ++ + ++ M + G PDVIT NT L L K ++ R ++E+
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ L + + AC ++E L K L ++S + + +C+ +
Sbjct: 605 R---------------LLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINA 649
Query: 400 ALE 402
A++
Sbjct: 650 AID 652
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 157/299 (52%), Gaps = 3/299 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
++V A E+L M++ G + T + +L +C R +S + L +++M G +V
Sbjct: 162 SKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVS--DALALMRDMTCRGCTPNVV 219
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L K +V DA +L M G PD++ Y M++NG+ + ++ L
Sbjct: 220 TYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA 279
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G+ PDV TY+ I GLC+ N ++ +++ ++ G PDVI Y+TL+ LCK ++
Sbjct: 280 VSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 339
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ +L + M G ++ TYS +IDGL G + EA LL + G + ++
Sbjct: 340 DEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSL 399
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
I GLC + +A+EL+++M + +P A + +L+ + +++ V+++ + ++++
Sbjct: 400 IKGLCDLNHLDEAIELVEEMERSNCAPSAVTYN-ILIHGMCRMERVDSAALDYFQEMID 457
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 121/218 (55%), Gaps = 1/218 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ + ++ L + K+ AL +M D P+++ Y+++++G+ +A EL +
Sbjct: 79 VISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVLIDGLCKANRVSQAVELLE 137
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G PDV TY + ++GLCK++ V A +++ M + G P+++TYN+LL LC+ R
Sbjct: 138 SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRAR 197
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L+++M +G N+ TY +IDGL G + +AC +L + ++KG +++
Sbjct: 198 RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYN 257
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ V +++ LL++ + P + +++
Sbjct: 258 MLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 170/362 (46%), Gaps = 29/362 (8%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRF 132
+ CEP Y+ +I L +N++ + +H++ E +P + + L+ +
Sbjct: 4 HGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVEC--SPSMVTYNTLLDGLFRTGKL 61
Query: 133 QDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG 192
+ ++ LF ++ ++R + N ++ G C GK + L
Sbjct: 62 ERAMALFQEM----LDRRSHDVISFNILVT-GLCRAGKI----------------ETALE 100
Query: 193 FVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
F ++M C ++ Y+ +I L K +V A+ +L MK+ G PD++ YT++++G+
Sbjct: 101 FFRKMDD--RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 158
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ A E+ E+L G VP++ TYN ++GLC+ V + ++ M G P+V
Sbjct: 159 CKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNV 218
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TY TL+ LCKV + ++ +M KG +L Y+++I+GL + E+ LL
Sbjct: 219 VTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRR 278
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSK 429
A++ G+ + I GLC+ + +A LL + + P ++ L+ L K
Sbjct: 279 AVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK 338
Query: 430 LD 431
+D
Sbjct: 339 VD 340
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 26/302 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFID-LI 123
+L+ + C P Y +I L + + D ++L D I+K TP+ + + LI
Sbjct: 204 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK---GGTPDLMIYNMLI 260
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
A + +S+ L + ++ G D T S ++ +C
Sbjct: 261 NGLCKADQVDESIALLRR------------------AVSGGIKPDVVTYSSVIYGLCRSN 302
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
L DE + +K G ++ Y+ +I L K KV +A + M DG D+V
Sbjct: 303 RL--DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ +++G+ +A L ++ +G P TYN I GLC N+++ I+++ ME
Sbjct: 361 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 420
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLR-ELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
P +TYN L+ +C++ ++ + +EM G++ + TYSI+++GL D+
Sbjct: 421 RSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 480
Query: 363 IE 364
E
Sbjct: 481 HE 482
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 36/247 (14%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN------- 284
M+ G +P++V Y +++G+ + +A+ELF+ + + P + TYN ++
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 285 ---------------------------GLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
GLC+ +E ++ M++ S P+VITY+ L
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYSVL 119
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LCK +++ EL++ MK +G ++ TY+I++DGL + + A +L E L+ G
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ + GLC+ V AL L++ M + +P + L+ + K+ V +
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY-GTLIDGLCKVGRVKDAC 238
Query: 438 IRLVDQI 444
L D I
Sbjct: 239 AMLADMI 245
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 146/292 (50%), Gaps = 4/292 (1%)
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
L + + KFR G A+E+ N M++ G D + ++ S+CE +DLS + + + M
Sbjct: 198 LLHGLVKFR--HFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM--IAHM 253
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
+ G +V Y +I L KK+KV++A+GI + +KPD+V Y ++ G+ +++
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
E+ DE+L L P + + GL K+ +E + ++ + + G P++ YN L
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ +LCK R+ + L M G+ N TYSI+ID +G + A L E ++ GL
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++ I G C+ G + A + +M +K + P + +L+ SK
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 26/299 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSL 174
F++ LI + +F ++ LF ++ K R N V ++I I D FC GK
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI------DMFCRRGKL--- 418
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
D L F+ EM G + Y ++I K + A G + +M +
Sbjct: 419 -------------DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
++P +V YT ++ G + KA L+ E+ G+ P +YT+ ++GL + +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+K+ M E KP+ +TYN +++ C+ ++++ E +KEM KGIV + +Y +I
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDV 412
GL G EA + + L+KG C + + + + G C+ G + +AL + ++M + V
Sbjct: 586 GLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 10/267 (3%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
NC +N+ C G +L C + L +E L QEM + G +V Y +I +
Sbjct: 607 NCELNE-ICYTG-----LLHGFCREGKL--EEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K + G+L +M G+KPD V YT +++ D+ +A ++D ++ G VP+
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR-ELNRLRELVKE 336
TY INGLCK V + + M+ + S P+ +TY L L K ++ + EL
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
+ KG++ N TY+++I G +G I EA L+ + G+ + I LC+R
Sbjct: 779 I-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
V+KA+EL M +K + P + L+
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 119/233 (51%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L + EM L F ++++ L K+ K+ +AL ++ ++ G+ P++ Y +++
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + +AE LFD + +GL P+ TY++ I+ C++ ++ + + M + G K
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V YN+L+ CK +++ + EM K + + TY+ ++ G SKG I +A L
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E KG+ F + GL + GL+R A++L +MA+ +V P + ++
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 2/266 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
M+++ C+ +SS+ E ++ +E L V+ + G + Y +I SL
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K K +A + ++M G++P+ V Y+++++ + A E++ GL VY
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
YN ING CK ++ A +A M +P V+TY +L+ C ++N+ L EM
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
KGI ++ T++ ++ GL G I +A L E + ++ I G C+ G +
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
KA E LK+M +K + P + L+
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 112/215 (52%), Gaps = 1/215 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I+ V+ +V D + + M + + P++ + +L+G++ + A ELF++++ +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ PDVY Y I LC+ ++ +MIA ME G +++ YN L+ LCK +++
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ K++ K + ++ TY ++ GL + +++E L + + G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L +RG + +AL L+K++ D VSP V+ AL+ S
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 6/240 (2%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ ++ LVK A+ + N M S GI+PD+ YT V+ + +D +A+E+ +
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 270 LGLVPDVYTYNVYINGLCKQNNV--EAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G ++ YNV I+GLCK+ V GIK ++L KPDV+TY TL+ LCKV+E
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL--KPDVVTYCTLVYGLCKVQEF 313
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
E++ EM + S +++GL +G I EA L++ ++ G+ +++
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL--LLSSVSKLDFVNTSFIRLVDQIL 445
I LC+ +A L +M + P + L + KLD + +VD L
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A I + MIN+G + T + +++ +C+ ++ E+L +M+ + V Y
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL--CSKMQPVSSVPNQVTYGCF 758
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K E L+ G+ + Y M++ G Q +A EL ++ G+
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY IN LC++N+V+ I++ M E G +PD + YNTL+ C E+ + E
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 333 LVKEMKWKGIVLNLQT 348
L EM +G++ N +T
Sbjct: 879 LRNEMLRQGLIPNNKT 894
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 126/229 (55%), Gaps = 1/229 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ L K +++ DAL + +M + GIKPD Y VL+G+ +E +A LF++++
Sbjct: 12 YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 71
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ P+V TYN INGLCK +E ++ M G P ++YNTL+ CK ++L
Sbjct: 72 KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 131
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+++ +M V N+ TY+ +IDGL+ G + A +L+ + KG+ + + I
Sbjct: 132 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLI 191
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
G C+ V +A +LL+QM + ++P + +LL+S+ + D + +F
Sbjct: 192 DGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN-ILLNSLCRADKLEDAF 239
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 148/312 (47%), Gaps = 22/312 (7%)
Query: 79 PPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP+A Y +++ L + + D + ++ + R + FI+ ++ + +++
Sbjct: 6 PPDALTYGPIVERLCKTKRIDDALATVEEMATR-GIKPDAFIYNFVLSGLCQEEKVEEAR 64
Query: 137 NLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
LF K+ K RIN R+ A E+ M G+ + + ++
Sbjct: 65 LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C+++DL + + +M + +V YT +I L K KV A +L+ M G+ P
Sbjct: 125 CKKKDLVAAK--DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 182
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++ Y+ +++G +A +L ++++ G+ P V TYN+ +N LC+ + +E K+
Sbjct: 183 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 242
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M + P V+TYNTLL+ALC ++L+ L EM KG + TY + GL
Sbjct: 243 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 302
Query: 360 GDIIEACGLLEE 371
G + EA L+E+
Sbjct: 303 GKVHEAQELMEK 314
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 2/256 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T I+ +C+ + + D+ L V+EM G Y V+ L ++EKV +A
Sbjct: 8 DALTYGPIVERLCKTKRI--DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ +M I P++V Y ++NG+ A ELF E+ G VP +YN I+G C
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K+ ++ A + M P+V+TY TL+ L K ++ E++ M KG+ N+
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TYS +IDG + EA LLE+ + +G+ ++ + LC+ + A +L + M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245
Query: 408 ADKDVSPGARVWEALL 423
A + P + LL
Sbjct: 246 AQRRCHPTVVTYNTLL 261
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 2/277 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+ A+ + M G D + +LS +C++ + LL ++M K
Sbjct: 21 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL--FEKMVKQRINPN 78
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I L K ++ A + +M G P V Y +++G ++D V A+++FD
Sbjct: 79 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 138
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ VP+V TY I+GL K V+A +++ M + G P+V TY+ L+ CKVR
Sbjct: 139 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 198
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L+++M +GI + TY+I+++ L + +A L + ++
Sbjct: 199 RVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYN 258
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ LC + A L +M K P A ++ L
Sbjct: 259 TLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 295
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 2/207 (0%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD + Y ++ + + A +E+ G+ PD + YN ++GLC++ VE +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M + P+V+TYNTL+ LCK + EL KEM KG V +Y+ +IDG
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
K D++ A + ++ + + I GL + G V+ A E+L M K V+P
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 419 WEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ L+ V ++D + ++V Q
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQ 213
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A E+L+ M+ G + T S ++ C+ R + DE +++M G +V
Sbjct: 163 GKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV--DEAHKLLEQMVTQGIAPTVV 220
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ SL + +K+ DA + M P +V Y +L + + A L+ E+
Sbjct: 221 TYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEM 280
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
+ G PD TY+ GL + V +++ M+ P
Sbjct: 281 IAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 140/280 (50%), Gaps = 4/280 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFC 203
R ++ A + + M+ G T + ++S +C+ DL S++ L G M K G
Sbjct: 255 IRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGL---MAKAGVA 311
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ Y ++ L K ++ DA+ + +M+ G+ P+ V +T +++ + + EL
Sbjct: 312 PDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLEL 371
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E+ G+ D+ YN NGLC+ +++A ++ M G KPD +TY TL+ CK
Sbjct: 372 HREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCK 431
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
EL+ E+ +EM +G+ L+ TY+ +I GL+ G +++ +L E + GL ++
Sbjct: 432 EGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTT 491
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I C+ V+ +LLK+M +K PG + ++
Sbjct: 492 YTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVM 531
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 107/205 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++R +++ K+ A + ++M G+ P +V + +++G+ D A L +
Sbjct: 247 FNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMA 306
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ PDVYTY ++ GLCK ++ ++M M E G P+ + + TL+ A CK +
Sbjct: 307 KAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVA 366
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL +EM +GI +L Y+ + +GL D+ A ++EE N GL + I
Sbjct: 367 AGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLI 426
Query: 389 CGLCQRGLVRKALELLKQMADKDVS 413
G C+ G + A+E+ ++M+D+ V+
Sbjct: 427 DGFCKEGELDMAMEMKQEMSDEGVA 451
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 128/258 (49%), Gaps = 2/258 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+ A+E+ M G + + ++ + C++ ++++ L +EM G
Sbjct: 326 KAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAG--LELHREMATRGIKTD 383
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y + L + + A I+ +M+++G+KPD V YT +++G + + A E+
Sbjct: 384 LVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQ 443
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G+ D TY I+GL K +++ M E G +PD TY ++ A CK
Sbjct: 444 EMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNS 503
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L+KEM+ KG + TY+++++G G + A LL LN G+C ++
Sbjct: 504 DVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYN 563
Query: 386 ETICGLCQRGLVRKALEL 403
+ G C+ G VR A EL
Sbjct: 564 ILLDGHCKHGKVRDAEEL 581
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G D T + +C+ + + + +EM++ G V +T +I + K+
Sbjct: 305 MAKAGVAPDVYTYGAFMQGLCKAGRIQ--DAVEMFEEMRERGVNPNTVVFTTLIDAHCKE 362
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
V L + +M + GIK D+V Y + NG+ D A ++ +E+ GL PD TY
Sbjct: 363 GNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTY 422
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+G CK+ ++ ++M M + G D +TY TL+ L K ++ EM
Sbjct: 423 TTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMME 482
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ + TY+++ID D+ LL+E NKG ++ + G C G ++
Sbjct: 483 AGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKN 542
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A LL M + V P + LL
Sbjct: 543 ADMLLNAMLNIGVCPDDITYNILL 566
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%)
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V +A Q+ G+ P+ + M++ +I A +FDE+L G+ P V T+N
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
++G+CK +++ + + M + G PDV TY +Q LCK + E+ +EM+ +G
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ N ++ +ID +G++ L E +G+ T ++ GLC+ ++ A
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404
Query: 402 ELLKQMADKDVSPGARVWEALL 423
+++++M + + P + L+
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLI 426
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 166/350 (47%), Gaps = 21/350 (6%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y C+P Y V+ + ++ Q +L +E+R N + + +I
Sbjct: 320 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLD 378
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++ NLF ++ + + I N +I GFC G+ D+
Sbjct: 379 NAFNLFNEM---EMKGITTNIITYNILIG-GFCNAGRW----------------DDGAKL 418
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+++M K +V ++ +I S VK+ K+ +A + +M GI PD + YT +++G
Sbjct: 419 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 478
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ KA ++ D ++ G P++ T+N+ ING CK N ++ G+++ M G D +T
Sbjct: 479 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 538
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNTL+Q C++ +LN +EL +EM + + N+ TY I++DGL G+ +A + E+
Sbjct: 539 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 598
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +++ I G+C V A +L + K V PG + + ++
Sbjct: 599 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 648
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S++++ C R L L F + ++ KLG+ + ++ +I L + +V +AL +
Sbjct: 223 TLSIMINCFCRCRKLC----LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 278
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+++M G KPD++ ++NG+ + +A L D+++ G P+ TY +N +CK
Sbjct: 279 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 338
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
++++ MEE K D + Y+ ++ LCK L+ L EM+ KGI N+ T
Sbjct: 339 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 398
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+I+I G + G + LL + + + + F I + G +R+A EL K+M
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 458
Query: 409 DKDVSPGARVWEALL 423
+ ++P + +L+
Sbjct: 459 HRGIAPDTITYTSLI 473
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +L ++M+ G + + +I + K+ A + ++ G +P+ + ++ +
Sbjct: 203 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 262
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ ++ +A EL D ++ +G PD+ T N +NGLC + +I M E G
Sbjct: 263 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 322
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+ +TY +L +CK + EL+++M+ + I L+ YSI+IDGL G + A
Sbjct: 323 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 382
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L E KG+ T ++ I G C G +LL+ M + ++P + L+ S V
Sbjct: 383 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 442
Query: 428 SK 429
+
Sbjct: 443 KE 444
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 145/298 (48%), Gaps = 4/298 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+E+++ M+ G D T + +++ +C + LL + +M + G V
Sbjct: 270 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL--IDKMVEYGCQPNAV 327
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y V+ + K + A+ +L +M+ IK D V Y+++++G+ A LF+E+
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G+ ++ TYN+ I G C + G K++ M + P+V+T++ L+ + K +L
Sbjct: 388 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 447
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL KEM +GI + TY+ +IDG + + +A +++ ++KG F+
Sbjct: 448 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 507
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
I G C+ + LEL ++M+ + V + L+ + KL+ F +V +
Sbjct: 508 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 565
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 117/235 (49%), Gaps = 2/235 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + A ++++ M++ G + +T +++++ C+ + D+ L ++M G V
Sbjct: 480 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI--DDGLELFRKMSLRGVVADTV 537
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I+ + K+ A + +M S + P+IV Y ++L+G+ + KA E+F+++
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ D+ YN+ I+G+C + V+ + + G KP V TYN ++ LCK L
Sbjct: 598 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ L ++M+ G + TY+I+I GD ++ L+EE G +S
Sbjct: 658 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 712
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ NR+ +E+ M G D T + ++ CE L+ + L QEM
Sbjct: 513 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL--FQEMVSRKVPPN 570
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ L + AL I +++ ++ DI Y ++++G+ A +LF
Sbjct: 571 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 630
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L + G+ P V TYN+ I GLCK+ + + MEE G PD TYN L++A
Sbjct: 631 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 690
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ + +L++E+K G ++ T ++ID L+
Sbjct: 691 DATKSVKLIEELKRCGFSVDASTIKMVIDMLS 722
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 100/206 (48%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y +RS + K DA+ + M P ++ ++ + + + + Y L +
Sbjct: 152 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 211
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + G+ ++YT ++ IN C+ + + + +LG +P+ IT++TL+ LC
Sbjct: 212 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 271
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ ELV M G +L T + +++GL G EA L+++ + G + +
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 331
Query: 387 TICGLCQRGLVRKALELLKQMADKDV 412
+ +C+ G A+ELL++M ++++
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNI 357
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 158/339 (46%), Gaps = 27/339 (7%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV-------- 150
+E R + ++F LI Y ++ +D++ + + +P +V
Sbjct: 62 LETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLK 121
Query: 151 ------GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
GF EIL C G+ ++++ C+ D+ + + K G
Sbjct: 122 YFKLVWGFYEEILEC----GYPASLYFFNILMHRFCKDGDIRLAQ--SVFDAITKWGLRP 175
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y ++ ++ + + + + M + G++PD+ Y++++NG+ + A ELF
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+LV GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 295
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L + L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 296 GDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 355
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLCQ G A ++L++M + P AR + ++
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 394
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A L D
Sbjct: 247 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ V GL PD TY I+G CK+ ++++ + M + + D + Y L+ LC+
Sbjct: 307 EMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 367 RSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 231 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 288
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 289 IYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENI 348
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ + +
Sbjct: 349 RLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSK 408
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 409 LLKEMQRDGHVPSVVTYNVLMNG 431
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RVG A+ + I DGF D T S ++ +C+ + D L + M + G
Sbjct: 278 KLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHV--DHALKVLGLMLQEGCEPD 335
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+ VI L ++ +A GI+NQM G PD + ++ + + +A +L
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAR 395
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
EL V GL P+VYT+N+ IN LCK + +++ M+ G PD +TYN L+ LC
Sbjct: 396 ELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSG 455
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + +L+KEM+ G + TY+ +IDGL + I EA + ++ G+ + F+
Sbjct: 456 KLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFN 515
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC + A EL+ QM + + P + ++L
Sbjct: 516 TLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSIL 553
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 166/381 (43%), Gaps = 52/381 (13%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P + Y +I+ L F D+ VL +RE E + I +YA F D+ +
Sbjct: 88 PSRDVYEEIIRKLGTAGAF-DLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFD 146
Query: 138 LFY-KIPKFRINR-------------VGFAIEILNC----MINDGFCVDGKTCSLILSSV 179
L ++ F + G I++L M + G D T + ++ ++
Sbjct: 147 LVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDAL 206
Query: 180 CEQR---------------DLSSDE------LLGFVQE------------MKKLGFCFGM 206
C R D++ DE + GFV+E M ++G
Sbjct: 207 CRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTS 266
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V +I K +V DALG + Q +DG +PD V ++ +NG+ A ++
Sbjct: 267 VTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGL 326
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L G PDVYTY+ IN LC +E ++ M + G PD T+NTL+ ALC +
Sbjct: 327 MLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQ 386
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L +L +E+ KG+ N+ T++I+I+ L GD A L EE + G ++
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNI 446
Query: 387 TICGLCQRGLVRKALELLKQM 407
I LC G + KAL+LLK+M
Sbjct: 447 LIDNLCSSGKLAKALDLLKEM 467
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
I+N M++ G D T + ++ ++C + L +E L +E+ G + + +I +
Sbjct: 358 IVNQMVDSGCLPDTTTFNTLIVALCTENQL--EEALDLARELTVKGLSPNVYTFNILINA 415
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K A+ + +MKS G PD V Y ++++ + KA +L E+ V G
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TYN I+GLCK+ +E ++ M+ G + IT+NTL+ LC ++ ELV
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVD 535
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
+M +G+ N TY+ ++ +G+I +A +L+ G + I GLC+
Sbjct: 536 QMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKAR 595
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLS 425
+ AL+LL+ M K + P + + ++ S
Sbjct: 596 RTQAALKLLRGMRMKGMKPTPKAYNPVIQS 625
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 3/264 (1%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+ + M + G D T ++++ ++C L+ + L ++EM+ G V Y
Sbjct: 424 LAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLA--KALDLLKEMEVSGCPQSTVTYNT 481
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L K+ ++ +A + +QM GI + + + +++G+ E A EL D+++ G
Sbjct: 482 IIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEG 541
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P+ TYN + CKQ N+ ++ M G + DV+TY TL+ LCK R
Sbjct: 542 LQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAAL 601
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L++ M+ KG+ + Y+ +I L + +A L E G + + GL
Sbjct: 602 KLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGL 661
Query: 392 CQ-RGLVRKALELLKQMADKDVSP 414
C+ G +++A + L +MAD P
Sbjct: 662 CRGGGPIKEAFDFLVEMADNGFIP 685
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EMK G V Y +I +L K+ AL +L +M+ G V Y +++G+ +
Sbjct: 430 EEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKR 489
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+AEE+FD++ V G+ + T+N I+GLC ++ +++ M G +P+ +TY
Sbjct: 490 RRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTY 549
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N++L CK +++ ++++ M G +++ TY+ +I+GL A LL
Sbjct: 550 NSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRM 609
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
KG+ ++ I L + R AL L ++M + P A ++
Sbjct: 610 KGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYK 655
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 131/276 (47%), Gaps = 37/276 (13%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +++ L + K+ +M S GI+PD+V + V++ + A + +E+
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS--------------------- 307
+ PD T+ + G ++ ++EA +++ A M E+G
Sbjct: 224 SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVG 283
Query: 308 --------------KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+PD +T++T + LC+ ++ +++ M +G ++ TYS +I
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI 343
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ L + G++ EA G++ + ++ G ++ F+ I LC + +AL+L +++ K +S
Sbjct: 344 NCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLS 403
Query: 414 PGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
P + +L++++ K+ + + +RL +++ ++ C
Sbjct: 404 PNVYTFN-ILINALCKVGDPHLA-VRLFEEMKSSGC 437
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 3/233 (1%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCYTMVLNGV 251
V EM++ G G+ + I S + + DA ++ NQ+ G++ + Y +L V
Sbjct: 112 LVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLT-V 170
Query: 252 IVQEDYVKA-EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + +K E + E+ G+ PDV T+N I+ LC+ + M+ M PD
Sbjct: 171 LAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPD 230
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
T+ TL++ + + L M G T +++I+G G + +A G ++
Sbjct: 231 ETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQ 290
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G F + GLCQ G V AL++L M + P + ++
Sbjct: 291 QEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI 343
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 29/283 (10%)
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQF--------------CDISSV---- 102
PH+ L C P Y+ +I L + + C S+V
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNT 481
Query: 103 -LDHIEKRENFETPEFIF--IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC 159
+D + KR E E +F +D+ +A F ++ R+ A E+++
Sbjct: 482 IIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCN-----AERIDDAAELVDQ 536
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI++G + T + IL+ C+Q ++S + +Q M GF +V Y +I L K
Sbjct: 537 MISEGLQPNNVTYNSILTHYCKQGNIS--KAADILQTMTANGFEVDVVTYATLINGLCKA 594
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ AL +L M+ G+KP Y V+ + + A LF E+ +G PD +TY
Sbjct: 595 RRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTY 654
Query: 280 NVYINGLCKQNN-VEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ GLC+ ++ + M + G P+ ++ L + L
Sbjct: 655 KIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL 697
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 138/273 (50%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL G+ ++++ C++RD+ + + K G +V Y
Sbjct: 110 GFYKEILE----SGYPASLYFFNILMHRFCKERDIRVAQ--SVFDAITKWGLRPSVVSYN 163
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 164 TLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 223
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 224 GLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 283
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 284 HDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 343
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P AR + ++
Sbjct: 344 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 376
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 2/226 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M G D T S++++ +C++ + D+ EM G
Sbjct: 171 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPN 228
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V AL I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 229 GVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 288
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 289 EMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 348
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
++++EM G+ + +TY+++I+ KGD+ + LL+E
Sbjct: 349 RSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 170/373 (45%), Gaps = 25/373 (6%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY F V++ L + D VLD + + P + +++ + F++SV
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHV-ILEAACRSGGFRNSV 166
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+L M G +D C+L+L+++CEQ + DE +G +++
Sbjct: 167 ------------------RVLEAMHAKGCTLDTGNCNLVLNAICEQGCV--DEAVGLLRK 206
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G +V Y V++ L ++ D ++++M P+IV + ++ +
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ + E+ ++ G PD+ Y I+G+CK+ ++E +++ M G KP+V+ YNT
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+L+ LC EL+ EM K L+ T++I++D G + LLE+ L+ G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ I G C+ GL+ +A+ LLK M+ P + +L S +V+
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446
Query: 437 FIRLVDQILNTPC 449
L+ Q++ C
Sbjct: 447 --ELMSQMIQQGC 457
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 168/366 (45%), Gaps = 22/366 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE-NFETPEFIFIDLIKT 125
+L S C P P YH +++ + F + VL+ + + +T + +
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLV--LNA 190
Query: 126 YADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVD 168
+ ++V L K+ F R G E+++ M+ +
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + ++ +C R+ + + + +M + G + Y +I + K+ + A I
Sbjct: 251 IVTFNTLIGYLC--RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
LN+M S G+KP++VCY VL G+ E + +AEEL E+ D T+N+ ++ C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
V+ I+++ M G PDVITY T++ CK ++ L+K M G N +
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+I++ GL S G ++A L+ + + +G F+ I LC++GLV +A+ELLKQM
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 409 DKDVSP 414
SP
Sbjct: 489 VNGCSP 494
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 168/367 (45%), Gaps = 22/367 (5%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQ 133
+C P ++ +I L N F + VL + E+ TP+ ++ +I +
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS--EHGCTPDIRMYATIIDGICKEGHLE 303
Query: 134 DSVNLFYKIPKFRI--NRVGF---------------AIEILNCMINDGFCVDGKTCSLIL 176
+ + ++P + + N V + A E+L+ M +D T ++++
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILV 363
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
C+ + D ++ +++M G ++ YT VI K+ + +A+ +L M S G
Sbjct: 364 DFFCQNGLV--DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
KP+ V YT+VL G+ +V AEEL +++ G P+ T+N IN LCK+ VE I
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G PD+I+Y+T++ L K + EL+ M KGI N YS + L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +G + + + + + + + + +++ I LC+R +A++ M P
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 417 RVWEALL 423
+ L+
Sbjct: 602 STYTMLI 608
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 56/283 (19%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
IE+L M++ G D T + +++ C++ + DE + ++ M G V YT V+
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLI--DEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
+ L + DA +++QM G P+ V + ++N + + +A EL ++LV G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP------------------------ 309
PD+ +Y+ I+GL K E ++++ M G P
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 310 -----------DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
D + YN ++ +LCK E +R + M G + N TY+++I GLAS
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+G EA LL E LC RG +RK L
Sbjct: 614 EGLAKEAQELLSE-------------------LCSRGALRKHL 637
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P+ + V+ G+ + A E+ DE+ G P Y+V + C+ +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G D N +L A+C+ ++ L++++ + G ++ +Y+ ++ GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 357 ASK---GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GD+ E L++E + F+ I LC+ GL + E+L QM++ +
Sbjct: 227 CMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT 283
Query: 414 PGARVWEALL 423
P R++ ++
Sbjct: 284 PDIRMYATII 293
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 170/373 (45%), Gaps = 25/373 (6%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY F V++ L + D VLD + + P + +++ + F++SV
Sbjct: 108 PPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHV-ILEAACRSGGFRNSV 166
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+L M G +D C+L+L+++CEQ + DE +G +++
Sbjct: 167 ------------------RVLEAMHAKGCTLDTGNCNLVLNAICEQGCV--DEAVGLLRK 206
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G +V Y V++ L ++ D ++++M P+IV + ++ +
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ + E+ ++ G PD+ Y I+G+CK+ ++E +++ M G KP+V+ YNT
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+L+ LC EL+ EM K L+ T++I++D G + LLE+ L+ G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ I G C+ GL+ +A+ LLK M+ P + +L S +V+
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAE 446
Query: 437 FIRLVDQILNTPC 449
L+ Q++ C
Sbjct: 447 --ELMSQMIQQGC 457
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 168/366 (45%), Gaps = 22/366 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE-NFETPEFIFIDLIKT 125
+L S C P P YH +++ + F + VL+ + + +T + +
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLV--LNA 190
Query: 126 YADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVD 168
+ ++V L K+ F R G E+++ M+ +
Sbjct: 191 ICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + ++ +C R+ + + + +M + G + Y +I + K+ + A I
Sbjct: 251 IVTFNTLIGYLC--RNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEI 308
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
LN+M S G+KP++VCY VL G+ E + +AEEL E+ D T+N+ ++ C+
Sbjct: 309 LNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQ 368
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
V+ I+++ M G PDVITY T++ CK ++ L+K M G N +
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+I++ GL S G ++A L+ + + +G F+ I LC++GLV +A+ELLKQM
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488
Query: 409 DKDVSP 414
SP
Sbjct: 489 VNGCSP 494
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 168/367 (45%), Gaps = 22/367 (5%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQ 133
+C P ++ +I L N F + VL + E+ TP+ ++ +I +
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMS--EHGCTPDIRMYATIIDGICKEGHLE 303
Query: 134 DSVNLFYKIPKFRI--NRVGF---------------AIEILNCMINDGFCVDGKTCSLIL 176
+ + ++P + + N V + A E+L+ M +D T ++++
Sbjct: 304 VANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILV 363
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
C+ + D ++ +++M G ++ YT VI K+ + +A+ +L M S G
Sbjct: 364 DFFCQNGLV--DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
KP+ V YT+VL G+ +V AEEL +++ G P+ T+N IN LCK+ VE I
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 481
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G PD+I+Y+T++ L K + EL+ M KGI N YS + L
Sbjct: 482 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +G + + + + + + + + +++ I LC+R +A++ M P
Sbjct: 542 SREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 601
Query: 417 RVWEALL 423
+ L+
Sbjct: 602 STYTMLI 608
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 56/283 (19%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
IE+L M++ G D T + +++ C++ + DE + ++ M G V YT V+
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLI--DEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
+ L + DA +++QM G P+ V + ++N + + +A EL ++LV G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP------------------------ 309
PD+ +Y+ I+GL K E ++++ M G P
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 310 -----------DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
D + YN ++ +LCK E +R + M G + N TY+++I GLAS
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+G EA LL E LC RG +RK L
Sbjct: 614 EGLAKEAQELLSE-------------------LCSRGALRKHL 637
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P+ + V+ G+ + A E+ DE+ G P Y+V + C+ +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G D N +L A+C+ ++ L++++ + G ++ +Y+ ++ GL
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 357 ASK---GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GD+ E L++E + F+ I LC+ GL + E+L QM++ +
Sbjct: 227 CMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT 283
Query: 414 PGARVWEALL 423
P R++ ++
Sbjct: 284 PDIRMYATII 293
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 143/283 (50%), Gaps = 2/283 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ ++ AI++LN M+ + D T ++++ ++C++ + E + M K +
Sbjct: 246 VGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAE--NVLAVMVKACVNLDV 303
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ ++ +V +A + M G+ PD+ CY++++NG+ + +A LF+E
Sbjct: 304 VVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEE 363
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ +VPD TY I+ LCK + + M + G PDVITYN L+ ALCK
Sbjct: 364 IHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGH 423
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L+R L +MK + I N+ T++I++DGL G + A ++ L KG C +
Sbjct: 424 LDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTV 483
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
I GLC+ GL+ +AL L +M D A +E ++ + K
Sbjct: 484 MINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDK 526
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 140/282 (49%), Gaps = 4/282 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF + G + ++++ VC+ + + + ++ +++ +V Y+ +I L K V
Sbjct: 158 GFRLSGISYGILINGVCKIGE--TRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVD 215
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A + +M GI PD+V Y+++++G + +A +L +E+++ + PD+YTY + +
Sbjct: 216 EAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILV 275
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ LCK+ V+ ++A M + DV+ Y+TL+ C V E+N + + M G+
Sbjct: 276 DALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVT 335
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ YSIMI+GL + EA L EE K + + + I LC+ G + +L
Sbjct: 336 PDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDL 395
Query: 404 LKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+M D+ P + L+ L LD F ++ DQ
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQ 437
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M ++G + Y+ +I L K ++V +AL + ++ + PD V YT +++ +
Sbjct: 329 MTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR 388
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+LFDE+L G PDV TYN I+ LCK +++ I + M++ +P+V T+
Sbjct: 389 ISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTI 448
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL LCKV L E +++ KG LN++TY++MI+GL +G + EA L + G
Sbjct: 449 LLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+ + F+ I + KA +L+++M
Sbjct: 509 CISDAVTFEIMIRAFFDKDENDKAEKLVREM 539
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 2/198 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I RV A+ + + D T + ++ +C+ +S + EM G
Sbjct: 350 KIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISY--VWDLFDEMLDRGQPPD 407
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y N+I +L K + A+ + N+MK I+P++ +T++L+G+ A E F
Sbjct: 408 VITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQ 467
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+LL G +V TY V INGLCK+ ++ + + + ME+ G D +T+ +++A
Sbjct: 468 DLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKD 527
Query: 326 ELNRLRELVKEMKWKGIV 343
E ++ +LV+EM +G++
Sbjct: 528 ENDKAEKLVREMIARGLL 545
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G +P+ + ++ G+ ++ +A D++L G +Y + ING+CK A
Sbjct: 123 GYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAA 182
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
I+++ +E +P+V+ Y+ ++ LCK ++ +L EM KGI ++ TYSI++ G
Sbjct: 183 IRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSG 242
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G + A LL E + + + + + LC+ G V++A +L M V+
Sbjct: 243 FCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLD 302
Query: 416 ARVWEALL 423
V+ L+
Sbjct: 303 VVVYSTLM 310
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 101/215 (46%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++ SLV ++ A+ + QM+ ++PD +++N V A ++L
Sbjct: 61 FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL 120
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
LG P+ T N + GLC + V+ ++ + G + I+Y L+ +CK+ E
Sbjct: 121 KLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L++ ++ I N+ YS++ID L + EA L E + KG+ + +
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C G + +A++LL +M ++++P + L+
Sbjct: 241 SGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILV 275
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+N V A + M G D S++++ +C+ + + DE L +E+ +
Sbjct: 316 VNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRV--DEALNLFEEIHQKNMVPDT 373
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT++I L K ++ + ++M G PD++ Y +++ + +A LF++
Sbjct: 374 VTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNK 433
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + P+VYT+ + ++GLCK ++ ++ + G +V TY ++ LCK
Sbjct: 434 MKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGL 493
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L+ L M+ G + + T+ IMI K + +A L+ E + +GL
Sbjct: 494 LDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 10/205 (4%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA+ N M P + +L ++ + Y A L+ ++ + + PD +T N+ I
Sbjct: 41 DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIII 100
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC---KVRELNRLRE--LVKEMK 338
N C V ++ + +LG +P+ IT NTL++ LC KV+E R + L + +
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
GI +Y I+I+G+ G+ A LL + ++ I LC+ LV
Sbjct: 161 LSGI-----SYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVD 215
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A +L +M K +SP + L+
Sbjct: 216 EAYDLYTEMVGKGISPDVVTYSILV 240
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 167/361 (46%), Gaps = 27/361 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SL + EP +I Q SVL I K ++ I L+K
Sbjct: 153 SLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKL-GYQPNTIILTTLMKG 211
Query: 126 YADAHRFQDSVNLFYKI--PKFRINRVGFAIEILNCMINDGFCVDGKT-CSLILSSVCEQ 182
+ S++ K+ F++N+V + +LN G C G+T C++ L + E
Sbjct: 212 LCLKGEVKKSLHFHDKVVAQGFQMNQVSYG-TLLN-----GLCKIGETRCAIKLLRMIED 265
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
R D +V Y +I L K + V +A +M S GI PD++
Sbjct: 266 RSTRPD-----------------VVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI 308
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y+ ++ G + + A L +E+ + + PDVYTY + I+ LCK+ ++ ++ M
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+ G KP+V+TY+TL+ C V E++ +++ M + ++ +Y+IMI+GL +
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSV 428
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
EA LL E L+K + + ++ I GLC+ G + AL+L+K++ + + +L
Sbjct: 429 DEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSL 488
Query: 423 L 423
L
Sbjct: 489 L 489
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 4/278 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTN 211
A +LN M D T ++++ ++C++ L + LLG M K G +V Y+
Sbjct: 326 AFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGV---MTKEGVKPNVVTYST 382
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ +V +A I + M + P + Y +++NG+ + +A L E+L
Sbjct: 383 LMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKN 442
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+VP+ TYN I+GLCK + + + ++ + G DVITY +LL LCK + L++
Sbjct: 443 VVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAI 502
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L +MK +GI N TY+ +IDGL + A L + L KG C ++ I GL
Sbjct: 503 ALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGL 562
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
C+ G++ +AL + +M D P A +E ++ S K
Sbjct: 563 CKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEK 600
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 35/253 (13%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN---------------- 249
++++ ++ SLVK + A+ + QM+ GI+PD+V ++++N
Sbjct: 132 IIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLG 191
Query: 250 -------------------GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
G+ ++ + K+ D+++ G + +Y +NGLCK
Sbjct: 192 KILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 251
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
IK++ +E+ ++PDV+ YNT++ LCK + +N + EM +GI ++ TYS
Sbjct: 252 ETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYS 311
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I G G ++ A LL E K + + I LC+ G +++A LL M +
Sbjct: 312 TLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKE 371
Query: 411 DVSPGARVWEALL 423
V P + L+
Sbjct: 372 GVKPNVVTYSTLM 384
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 143/295 (48%), Gaps = 20/295 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL+ ++ N P Y +I L + + + ++L + +E + + L+
Sbjct: 328 SLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLG-VMTKEGVKPNVVTYSTLMDG 386
Query: 126 YADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVD 168
Y ++ +F+ + + +N V A+ +L M++ +
Sbjct: 387 YCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPN 446
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + ++ +C+ ++S L ++E+ G ++ YT+++ L K + + A+ +
Sbjct: 447 TVTYNSLIDGLCKSGRITSA--LDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIAL 504
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+MK GI+P+ YT +++G+ A++LF +LV G DVYTYNV I GLCK
Sbjct: 505 FMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCK 564
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ ++ + M + ME+ G PD +T+ ++++L + E ++ +L+ EM KG++
Sbjct: 565 EGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L K + V +A+ +L +M + P+ V Y +++G+ A +L EL
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G DV TY ++GLCK N++ I + M+E G +P+ TY L+ LCK L
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARL 533
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++L + + KG +++ TY++MI GL +G + EA + + + G + F+
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEII 593
Query: 388 ICGLCQRGLVRKALELLKQMADKDV 412
I L ++ KA +LL +M K +
Sbjct: 594 IRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%)
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V DA+ N M P I+ + +L ++ + + A L ++ V G+ PD+ T ++
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
IN C + ++ + +LG +P+ I TL++ LC E+ + ++ +G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+N +Y +++GL G+ A LL ++ M++ I GLC+ LV +A
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292
Query: 402 ELLKQMADKDVSPGARVWEALL 423
+ +M + + P + L+
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLI 314
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 140/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A+ + I DGF D T + + +C+ +S L + M + G
Sbjct: 277 KMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVS--HALKVMDLMLQEGHDPD 334
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y VI L K ++ +A GI+NQM G PD + ++ + Q +A +L
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
EL V GL PDVYT+N+ IN LCK + GI++ M+ G PD +TYN L+ LC +
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L +L+KEM+ G + TY+ +ID L + I EA + ++ G+ + F+
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFN 514
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ + A EL++QM + + P + ++L
Sbjct: 515 TLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSIL 552
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 177/374 (47%), Gaps = 26/374 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y +I+ L F D+ L +RE E + +++YA RF D+V+
Sbjct: 87 PSRAVYEEIIQKLGTAGAF-DLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVD 145
Query: 138 LFYKIPKFRINRVGFAIE--ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
L + ++N G + + N ++N +L+ + L S
Sbjct: 146 LV----RNQLNTFGVQADTAVYNHLLN------------VLAEGSRMKLLES-----VYN 184
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM G +V +I++L + +V A+ +L +M S + PD +T ++ G I +
Sbjct: 185 EMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEG 244
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A + +++ G P T NV ING CK VE + I G +PD +TYN
Sbjct: 245 SIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYN 304
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
T + LC+ ++ +++ M +G ++ TY+ +I+ L+ G++ EA G++ + +++
Sbjct: 305 TFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR 364
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
G ++ F+ I LC + + +AL+L +++ K +SP + +L++++ K+ +
Sbjct: 365 GCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFN-ILINALCKVGDPHL 423
Query: 436 SFIRLVDQILNTPC 449
IRL +++ ++ C
Sbjct: 424 G-IRLFEEMKSSGC 436
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 137/275 (49%), Gaps = 6/275 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG--FVQEMKKLGFCFG 205
NR+ A+++ + G D T +++++++C+ D LG +EMK G
Sbjct: 384 NRLEEALDLARELTVKGLSPDVYTFNILINALCK----VGDPHLGIRLFEEMKSSGCAPD 439
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I L K+ +AL +L +M+S+G V Y +++ + Q +AEE+FD
Sbjct: 440 EVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD 499
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ T+N I+GLCK ++ ++I M + G +P ITYN++L CK
Sbjct: 500 QMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQG 559
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++++ M G +++ TY +I+GL G A LL KG+ ++
Sbjct: 560 DLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYN 619
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
I L +R +R AL L ++M + P A ++
Sbjct: 620 PVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYK 654
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
I+N M++ G D T + ++ ++C Q L +E L +E+ G + + +I +
Sbjct: 357 IVNQMVDRGCLPDTTTFNTLIVALCSQNRL--EEALDLARELTVKGLSPDVYTFNILINA 414
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K + + +MKS G PD V Y ++++ + V A +L E+ G
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TYN I+ LCKQ +E ++ M+ G +T+NTL+ LCK + ++ EL++
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIE 534
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
+M +G+ + TY+ ++ +GD+ +A +LE G + I GLC+ G
Sbjct: 535 QMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAG 594
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLS 425
+ AL+LL+ M K + P + + ++ S
Sbjct: 595 RTQVALKLLRGMRIKGIRPTPKAYNPVIQS 624
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 21/356 (5%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y+ VI L++N + + +++ + R F LI +R ++++
Sbjct: 332 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTT-TFNTLIVALCSQNRLEEAL 390
Query: 137 NLFYKIP-----------KFRIN---RVG---FAIEILNCMINDGFCVDGKTCSLILSSV 179
+L ++ IN +VG I + M + G D T ++++ +
Sbjct: 391 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHL 450
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C L + L ++EM+ G V Y +I +L K+ ++ +A + +QM + GI
Sbjct: 451 CSMGKLVN--ALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISR 508
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
V + +++G+ + A EL ++++ GL P TYN + CKQ +++ ++
Sbjct: 509 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADIL 568
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M G + DV+TY TL+ LCK +L++ M+ KGI + Y+ +I L +
Sbjct: 569 ETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRR 628
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ-RGLVRKALELLKQMADKDVSP 414
++ +A L E G + + GLC+ G +++A + L +M +K P
Sbjct: 629 NNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMP 684
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 111/283 (39%), Gaps = 29/283 (10%)
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAE--------------NSQFCDISSV---- 102
PH+ L C P Y+ +I L S C S+V
Sbjct: 421 PHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNT 480
Query: 103 -LDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF--RINRVGFAIEILNC 159
+D + K+ E E +F + DAH S F + + R+ A E++
Sbjct: 481 IIDALCKQMRIEEAEEVFDQM-----DAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 535
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ +G T + IL+ C+Q DL + ++ M GF +V Y +I L K
Sbjct: 536 MVKEGLQPSNITYNSILTHYCKQGDLK--KAADILETMTANGFEIDVVTYGTLINGLCKA 593
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ AL +L M+ GI+P Y V+ + + + A LF E+ +G PD TY
Sbjct: 594 GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTY 653
Query: 280 NVYINGLCKQNN-VEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ GLC+ ++ + M G P+ ++ L + L
Sbjct: 654 KIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 696
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 57/220 (25%)
Query: 247 VLNGVIVQEDYVKAEELFDEL-----------LVLGLV---------------------- 273
+LN + +ED+ + +++E+ L+ GLV
Sbjct: 75 MLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESY 134
Query: 274 -----------------------PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
D YN +N L + + ++ + M + G +PD
Sbjct: 135 ARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPD 194
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V+T NTL++ALC+ ++ +++EM + + T++ ++ G +G I A +
Sbjct: 195 VVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKT 254
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELL-KQMAD 409
+ + G + I G C+ G V AL + K++AD
Sbjct: 255 KMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD 294
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 110/205 (53%)
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
++ V A L +M G++P V + +LNG+ + + A +LFDE+ +G P + T
Sbjct: 119 RDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLIT 178
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y I GLCK + ++++ MEE G KPDV+ YNT++ +LCK R N EM
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV 238
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+GI N+ TYS ++ G + G + EA L ++ + + + + F + GLC+ G++
Sbjct: 239 DQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMIL 298
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A + + M + V P A + AL+
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALM 323
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M +G D T S ++ C Q + DE M GF + Y +
Sbjct: 300 ARRVFEMMTENGVEPDAYTYSALMDGYCLQSQM--DEAQKLFDIMVGKGFAPSVRVYNIL 357
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K ++ +A +L++M + PD V Y+ ++ G A++LF E+ GL
Sbjct: 358 INGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGL 417
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD TY++ ++GLCK +++ +++ M+E +P + YN L+Q +C +L RE
Sbjct: 418 LPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARE 477
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L + KGI ++ TY++MI GL +G EAC + + + G S ++ I G
Sbjct: 478 LFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFL 537
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G A+ L+++M + S + ++ LL
Sbjct: 538 RNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R A+ + M++ G + T S IL C L +E ++M V
Sbjct: 226 RANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQL--NEATSLFKQMIGRNVMPNTVT 283
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+T ++ L K+ + +A + M +G++PD Y+ +++G +Q +A++LFD ++
Sbjct: 284 FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMV 343
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P V YN+ ING CK + +++ M + PD +TY+TL+Q C+
Sbjct: 344 GKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQ 403
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++L KEM G++ + TYSI++DGL G + EA LL+ + +++ I
Sbjct: 404 VAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILI 463
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+C G + A EL + K + P + ++
Sbjct: 464 QGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMI 498
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I A+++L M G D + ++ S+C+ R ++E + F EM G
Sbjct: 188 KIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDR--RANEAMYFFSEMVDQGIPPN 245
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y++++ ++ +A + QM + P+ V +T++++G+ + ++A +F+
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFE 305
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G+ PD YTY+ ++G C Q+ ++ K+ M G P V YN L+ CK R
Sbjct: 306 MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSR 365
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
LN + L+ EM + + + TYS ++ G G A L +E + GL S +
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYS 425
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ G + +A LLK M + + P ++ L+
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILI 463
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 122/253 (48%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++++ +C + +M KLG V + ++ L K K+ DA+ + +
Sbjct: 106 TLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFD 165
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
++ G P ++ YT ++ G+ A +L ++ G PDV YN I+ LCK
Sbjct: 166 EIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDR 225
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + M + G P+V+TY+++L C + +LN L K+M + ++ N T++
Sbjct: 226 RANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFT 285
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++DGL +G I+EA + E G+ + + + G C + + +A +L M K
Sbjct: 286 ILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGK 345
Query: 411 DVSPGARVWEALL 423
+P RV+ L+
Sbjct: 346 GFAPSVRVYNILI 358
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 12/225 (5%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
GFC +Y N+ V DA+ NQ+ P +V + +L ++ ++ Y
Sbjct: 39 GFC---SNYNNL-------HSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTV 88
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQN--NVEAGIKMIACMEELGSKPDVITYNTLL 318
L ++ + + P+VYT + IN LC N +V + M +LG +P +T+ TLL
Sbjct: 89 ISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLL 148
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LC ++ +L E+ G +L TY+ +I GL G A LL++ KG
Sbjct: 149 NGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCK 208
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I LC+ +A+ +M D+ + P + ++L
Sbjct: 209 PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSIL 253
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 155/389 (39%), Gaps = 47/389 (12%)
Query: 14 LRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSF-- 71
L+K + P ++ +D + +++ Q IP SS+LH F
Sbjct: 199 LKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCN 258
Query: 72 --------SIY------NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF 117
S++ N P + ++ L + + V + + + E +
Sbjct: 259 LGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE-NGVEPDAY 317
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFA--IEILNCMINDGFCVDGK--TCS 173
+ L+ Y + ++ LF + + GFA + + N +IN G C +
Sbjct: 318 TYSALMDGYCLQSQMDEAQKLF----DIMVGK-GFAPSVRVYNILIN-GHCKSRRLNEAK 371
Query: 174 LILSSVCEQRDLSSDELL------GFVQ------------EMKKLGFCFGMVDYTNVIRS 215
+LS + + RDL+ D + GF Q EM G + Y+ ++
Sbjct: 372 TLLSEMYD-RDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K + +A +L M+ I+P I Y +++ G+ A ELF L V G+ P
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V TY V I+GL K+ +M M G P+ TYN +Q + + + L++
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIE 550
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
EM +G + T+ +++D L S +II
Sbjct: 551 EMVGRGFSADSSTFQMLLD-LESNDEIIS 578
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 140/271 (51%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L M + G+ D T + ILS +C +S E F M G+ +V Y +
Sbjct: 168 AYKLLEEMASKGYVPDNITYNTILSGLCRMGKVS--EAKQFFDSMPSRGYSPDVVAYNGL 225
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +L K+ K +A+ + + + G PD V Y +L G+ + + +AEE+F +++ G
Sbjct: 226 LDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGC 285
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TY++ ++G C+ V+ K++ M ++G+ PDV+TYN LL LCK +++ E
Sbjct: 286 APNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 345
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L M G ++ +YS++++GL + +A L + + + L F+ + GLC
Sbjct: 346 LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLC 405
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + +A +LL QM +P + L+
Sbjct: 406 KAGKLDEAKDLLDQMTCSGCAPDYVAYNTLM 436
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 115/213 (53%), Gaps = 1/213 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V++S K+ K+ D + QM +GI PD + Y ++++G + +A L++E++ +G
Sbjct: 14 VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG 73
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P +YTYN +N CK+ ++ +++ M E G +PDV+TY+T++ LCK ++
Sbjct: 74 LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEAL 133
Query: 332 E-LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
E L +M +G N Y+ +I+GL +I A LLEE +KG + ++ + G
Sbjct: 134 EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSG 193
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G V +A + M + SP + LL
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLL 226
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 172/390 (44%), Gaps = 23/390 (5%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQD 134
C P + V+K+ + + D + + + +N +P+ I + LI YA R +
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQM--LDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 135 SVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+ L+ ++ + ++ A+E+ M GF D T S I+S
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+C+ ++ + L +M + G V Y +I L K E + A +L +M S G
Sbjct: 122 GLCKTGKVT-EALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PD + Y +L+G+ +A++ FD + G PDV YN ++ L K+ + +K
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ + G PD +TYN++L L + ++ E+ K+M G N TYSI++ G
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHC 300
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ +A +LEE G ++ + GLC+ LV KA EL M D +P
Sbjct: 301 RAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 360
Query: 418 VWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
+ +L L +K+ F R++++ L
Sbjct: 361 SYSVVLNGLCKTNKVHDARVLFDRMIERKL 390
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 141/265 (53%), Gaps = 2/265 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ +V A + + M + G+ D + +L ++ ++ +DE + +++ G+
Sbjct: 196 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL--YKEGKTDEAMKLFKDVIAKGYMPD 253
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +++ L +K + +A + +M + G P+ Y++VL+G + A ++ +
Sbjct: 254 TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +G VPDV TYN+ ++GLCK N V+ ++ + M + G PD+++Y+ +L LCK
Sbjct: 314 EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN 373
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ R L M + +V ++ T++I++DGL G + EA LL++ G ++
Sbjct: 374 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYN 433
Query: 386 ETICGLCQRGLVRKALELLKQMADK 410
+ GL ++G +A L + M +K
Sbjct: 434 TLMNGLRKQGRHIQADRLTQAMKEK 458
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 159/334 (47%), Gaps = 10/334 (2%)
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEIL-NCMINDGFCVDGKTCSLILS 177
++L KT A+ D V I + +V A+E+L + MI G + + +++
Sbjct: 98 MELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALIN 157
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+C+ ++ + ++EM G+ + Y ++ L + KV +A + M S G
Sbjct: 158 GLCKDENI--ERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGY 215
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PD+V Y +L+ + + +A +LF +++ G +PD TYN + GL +++N++ +
Sbjct: 216 SPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE 275
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M M G P+ TY+ +L C+ ++++ ++++EM G V ++ TY+I++DGL
Sbjct: 276 MFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLC 335
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ +A L ++ G + + GLC+ V A L +M ++ + P
Sbjct: 336 KTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVV 395
Query: 418 VWEALL--LSSVSKLDFVNTSFIRLVDQILNTPC 449
+ L+ L KLD L+DQ+ + C
Sbjct: 396 TFNILMDGLCKAGKLDEAKD----LLDQMTCSGC 425
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
++ + A+++ +I G+ D T + IL + + ++ DE ++M G
Sbjct: 230 YKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM--DEAEEMFKKMVASGCAP 287
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
Y+ V+ + +KV DA +L +M G PD+V Y ++L+G+ KA ELF
Sbjct: 288 NGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF 347
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G PD+ +Y+V +NGLCK N V + M E PDV+T+N L+ LCK
Sbjct: 348 STMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 407
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+L+ ++L+ +M G + Y+ +++GL +G I+A L + KG
Sbjct: 408 GKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 2/191 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ M+ G +G T S++LS C + + D+ ++EM K+G +V Y +
Sbjct: 273 AEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV--DDAHKVLEEMSKIGAVPDVVTYNIL 330
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K V A + + M +G PDIV Y++VLNG+ A LFD ++ L
Sbjct: 331 LDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 390
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPDV T+N+ ++GLCK ++ ++ M G PD + YNTL+ L K +
Sbjct: 391 VPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADR 450
Query: 333 LVKEMKWKGIV 343
L + MK KG +
Sbjct: 451 LTQAMKEKGFL 461
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 128 DAHRFQDSVNLFYKIPKF-----------RINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
DAH+ + ++ +P + N V A E+ + M+++G D + S++L
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 366
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C+ + +L M + +V + ++ L K K+ +A +L+QM G
Sbjct: 367 NGLCKTNKVHDARVL--FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG 424
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
PD V Y ++NG+ Q +++A+ L + G + D +
Sbjct: 425 CAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 141/267 (52%), Gaps = 2/267 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R A+ +L M G D T +++L + C++ + + + EM G +V
Sbjct: 180 GRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYK--QAMKLLDEMHDKGCAPDIV 237
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y V+ + ++ +V DA+ L + S G +P+ V Y +VL G+ E + AE+L +E+
Sbjct: 238 TYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEM 297
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G P+V T+N+ I+ LC++ VE ++++ M + G P+ ++YN LL A CK +++
Sbjct: 298 AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKI 357
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++ E V+ M +G ++ +Y+ ++ L G++ A LL + +KG ++
Sbjct: 358 HKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTV 417
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I GL + G ++ALELL +M K + P
Sbjct: 418 IDGLTKAGKTKEALELLDEMTSKGLQP 444
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 147/279 (52%), Gaps = 4/279 (1%)
Query: 149 RVGF--AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
R G+ A+++L+ M + G D T +++L+ +C++ + ++ + F++ + G
Sbjct: 214 RSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRV--EDAMEFLKNLPSYGCEPNT 271
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y V++ L E+ DA ++ +M G P++V + M+++ + + A E+ ++
Sbjct: 272 VSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQ 331
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G P+ +YN ++ CKQ + ++ + M G PD+++YNTLL ALC+ E
Sbjct: 332 MPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGE 391
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ EL+ ++K KG L +Y+ +IDGL G EA LL+E +KGL +
Sbjct: 392 VDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYST 451
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GLC+ + +A+ ++ D + P A ++ A+LL
Sbjct: 452 IASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLG 490
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 157/322 (48%), Gaps = 21/322 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L + Y CEP +Y+ V+K L ++ D +++ + + P + +++ ++
Sbjct: 258 FLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGC--PPNVVTFNMLISF 315
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R V A+E+L M G + + + +L + C+Q+ +
Sbjct: 316 L-----------------CRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKI- 357
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ + FV+ M G +V Y ++ +L + +V A+ +L+Q+K G P ++ Y
Sbjct: 358 -HKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNT 416
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ +A EL DE+ GL PD+ TY+ +GLC+++ +E ++ ++++G
Sbjct: 417 VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMG 476
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P YN +L LCK RE + +L M G + N TY+I+++GLA +G + EA
Sbjct: 477 IRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEAR 536
Query: 367 GLLEEALNKGLCTQSSMFDETI 388
L + ++G+ + M +I
Sbjct: 537 ELFAQLCSRGVVNKKLMKKGSI 558
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 112/217 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +IR L + + +AL +L M G PD+V YT++L + Y +A +L DE+
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH 228
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD+ TYNV +NG+C++ VE ++ + + G +P+ ++YN +L+ L
Sbjct: 229 DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L++EM KG N+ T++++I L +G + A +LE+ G S ++ +
Sbjct: 289 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLL 348
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C++ + KA+E ++ M + P + LL +
Sbjct: 349 HAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTA 385
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
++EM G +V + +I L ++ V A+ +L QM G P+ + Y +L+
Sbjct: 293 LMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFC 352
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
Q+ KA E + ++ G PD+ +YN + LC+ V+ I+++ +++ G P +I
Sbjct: 353 KQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLI 412
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
+YNT++ L K + EL+ EM KG+ ++ TYS + GL + I EA +
Sbjct: 413 SYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKV 472
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+ +++++ + GLC+R A++L M P + L+
Sbjct: 473 QDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++PD Y ++ G+ + A + +++ G +PDV TY + + CK++ + +
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K++ M + G PD++TYN +L +C+ + E +K + G N +Y+I++ GL
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +A L+EE +KG F+ I LC+RGLV A+E+L+QM +P +
Sbjct: 282 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNS 341
Query: 417 RVWEALL 423
+ LL
Sbjct: 342 LSYNPLL 348
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 161/359 (44%), Gaps = 28/359 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI-KTYADAHRFQ 133
C P Y +++ + S + +LD E + P+ + +++ R +
Sbjct: 196 GCLPDVVTYTILLEATCKRSGYKQAMKLLD--EMHDKGCAPDIVTYNVVLNGICQEGRVE 253
Query: 134 DSVNLFYKIPKF--RINRVGFAI---------------EILNCMINDGFCVDGKTCSLIL 176
D++ +P + N V + I +++ M + G + T ++++
Sbjct: 254 DAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLI 313
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
S +C +R L + + +++M + G + Y ++ + K++K+ A+ + M S G
Sbjct: 314 SFLC-RRGLV-EPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRG 371
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
PDIV Y +L + + A EL +L G P + +YN I+GL K + +
Sbjct: 372 CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEAL 431
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK---EMKWKGIVLNLQTYSIMI 353
+++ M G +PD+ITY+T+ LC RE +R+ E V+ +++ GI Y+ ++
Sbjct: 432 ELLDEMTSKGLQPDIITYSTIASGLC--RE-DRIEEAVRTFCKVQDMGIRPTAALYNAIL 488
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
GL + + A L ++ G S + + GL GLV++A EL Q+ + V
Sbjct: 489 LGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 8/215 (3%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +R LV++ ++ DAL +++ + G+ P +I + + D V
Sbjct: 71 TERLRVLVRRGELDDALRLVDSLA--GLNPPSPAAVGPCAALI--KKLCASGRTADARRV 126
Query: 270 LGLV-PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L PDV YN + G C ++A +++A ++ +PD TYNTL++ LC +
Sbjct: 127 LAASGPDVMVYNAMVAGYCGAGQLDAARRLVA---DMPVEPDAYTYNTLIRGLCGRGRTS 183
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++++M +G + ++ TY+I+++ + +A LL+E +KG ++ +
Sbjct: 184 NALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVL 243
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+CQ G V A+E LK + P + +L
Sbjct: 244 NGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVL 278
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 164/367 (44%), Gaps = 24/367 (6%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P A Y+ VI + ++ + +R ++ + +I + R ++
Sbjct: 515 PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEA 574
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK--TCSLILSSVCEQ----------- 182
V +F ++ V + N +I G+C GK T L + E+
Sbjct: 575 VKVFDEM--LTKGEVKPEAVMYNALIG-GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 631
Query: 183 ------RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
D E V+EM G + Y +I K+ V AL I M G
Sbjct: 632 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 691
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++ +V YT ++ + + + ++LFDE + G+ PD+ YN IN N++
Sbjct: 692 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 751
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ ME+ PD +TYNTL++ LC + ++ R+L+ EM +GI +L TY+ +I G
Sbjct: 752 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 811
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ KGD+ +A + E +NKG ++ I GLC+ G A ++K+M + ++P
Sbjct: 812 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 871
Query: 417 RVWEALL 423
+ +L+
Sbjct: 872 STYISLI 878
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 6/301 (1%)
Query: 148 NRVGFAIEILNCMI-NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG- 205
RV A++I+ M G + T ++S C+ + DE + EM G
Sbjct: 533 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV--DEAVKVFDEMLTKGEVKPE 590
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I + K+ AL ++M G+ + Y ++++ + + +A EL +
Sbjct: 591 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 650
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL PDV+TYN+ ING CK+ NV+ +++ M G + V+TY L+ AL K
Sbjct: 651 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 710
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L E +GI +L Y+ +I+ ++ G+I A ++ E K + ++
Sbjct: 711 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 770
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ GLC G V +A +L+ +M ++ + P + L+ K D + +R+ ++++
Sbjct: 771 TLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA--LRIRNEMM 828
Query: 446 N 446
N
Sbjct: 829 N 829
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F R A E++ M G D T +++++ C++ ++ + L + M + G
Sbjct: 637 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK--KALEIFENMSRRGVRA 694
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V YT +I +L KK +V + + ++ GI+PD+V Y ++N + +A E+
Sbjct: 695 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 754
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PD TYN + GLC V+ K+I M E G +PD++TYNTL+
Sbjct: 755 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 814
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ + EM KG L TY+ +I GL G +A +++E + G+ S +
Sbjct: 815 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 874
Query: 385 DETICGL 391
I GL
Sbjct: 875 ISLIEGL 881
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
LF ++ L L T+N+ + LC ++++ M +P+ +TYNT++ C
Sbjct: 475 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFC 530
Query: 323 KVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG-LCTQ 380
+ ++++EM+ + GI N TY +I G G + EA + +E L KG + +
Sbjct: 531 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 590
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ M++ I G C +G + AL +M ++ V+
Sbjct: 591 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 623
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 134/270 (49%), Gaps = 3/270 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +G A E+L M G + ++++ +C R L D L +EM++ G C
Sbjct: 889 RAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKL--DSALELFKEMEESGSCPP 946
Query: 206 MV-DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y+ ++ SLVK KV DA ++ M S G P++V Y+ +L+G+ +A L
Sbjct: 947 DVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 1006
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ G P++ TYN I+G CK ++ ++ M + G +P+V+TY LL A CK
Sbjct: 1007 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 1066
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ LV+ M KG V NL TY+ ++D K ++ AC LL + KG +
Sbjct: 1067 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 1126
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSP 414
+ I GLC+ V + + LL+QM + P
Sbjct: 1127 NTVIAGLCKATKVHEGVLLLEQMLSNNCVP 1156
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 174/347 (50%), Gaps = 29/347 (8%)
Query: 108 KRENFETPEFIFIDLIKTYA--DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGF 165
+R + E + +I+T DA + ++ F K K R A ++L MI G
Sbjct: 382 RRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLR-----EAHDLLEQMIRRGC 436
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM------VDYTNVIRSLVKK 219
D S ++ ++C+ + S QE+ ++ GM V Y+ +I +L K
Sbjct: 437 RPDVACLSTLIDALCKAAAIDS------AQELLRMSI--GMDCAPDVVAYSILIHALCKA 488
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+++ +A L+ M + PD+V Y V++G+ A LFD + G++PDV TY
Sbjct: 489 KRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTY 548
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
++ I+ CK NN+++ KM+ M+E PDV+TY+ L+ LCK +++ ++ +EM
Sbjct: 549 SIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLG 608
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVR 398
G NL TY+ +IDGL + +A +L E + K CT S+ + I GLC +
Sbjct: 609 CGCAPNLVTYNTLIDGLCKINKVEQAAEML-EIMRKQSCTPDSITYTCLINGLCNASRLE 667
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+A +L++M DK P R+ LL ++ K T+ + LV+Q+L
Sbjct: 668 EAWRVLREMKDKGCLPD-RMTYGTLLRALQK-----TNNLELVEQLL 708
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 119/236 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ + ++EM GF + Y V+ K +V +AL +L QM + G PD+V YT V
Sbjct: 247 DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTV 306
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ + +A + D+++ G P+V TY ++G C+ +++ ++++ M E G
Sbjct: 307 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 366
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+ ITYN ++ C+ ++ R ++++ M G + YS +I G G + EA
Sbjct: 367 RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHD 426
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LLE+ + +G + I LC+ + A ELL+ D +P + L+
Sbjct: 427 LLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILI 482
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 145/296 (48%), Gaps = 6/296 (2%)
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
DL ++ + D+V I F R ++ A E+ + M G IL +
Sbjct: 147 DLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGL 206
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
C+ SD +L F +EM K C V Y +I L K +++ DA+ +L +M +G
Sbjct: 207 CDAGQ-CSDAVLHF-REMSKT--CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFA 262
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P++ Y VL+G A L ++++ G PDV +Y INGLCK + V+ ++
Sbjct: 263 PNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRV 322
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M + G +P+VITY TL+ C+V +L+ ELV++M +G N TY+ ++
Sbjct: 323 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCR 382
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ D+ A +L+ + G + + I G C+ G +R+A +LL+QM + P
Sbjct: 383 RNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRP 438
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 148/306 (48%), Gaps = 18/306 (5%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCF 204
+ +V + +L M+++ D T + I+ ++C+ + + EL +QE G
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES---GCTP 1191
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y +++ L K + A +L +M + G PDI+ Y V++G+ + +A +L
Sbjct: 1192 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 1251
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F ++L GL PD TY++ I+ LCK ++ ++ M + G P ITY TL+ CK
Sbjct: 1252 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 1311
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
L++ E+++ + KG ++ T+SI ID L+ +G + +A LLE L GL +
Sbjct: 1312 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 1371
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL------------LLSSVSKLD 431
++ + G C L A++L + M P + L LL+ VSK
Sbjct: 1372 YNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSK-S 1430
Query: 432 FVNTSF 437
V+T F
Sbjct: 1431 MVDTGF 1436
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 27/365 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
+C P Y ++ +L ++ + D +++ + + +P + + L+ A +
Sbjct: 943 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGC--SPNVVTYSSLLHGLCKAGKLD 1000
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNC-MINDGFCVDGKTCSLILSSVCEQRDLSSDELLG 192
++ L R+ R G + I+ I DG C G+ DE
Sbjct: 1001 EATALLQ-----RMTRSGCSPNIVTYNTIIDGHCKLGRI----------------DEAYH 1039
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
++EM G +V YT ++ + K K DA+G++ M G P++ Y +L+
Sbjct: 1040 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 1099
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+++ +A +L ++ G VP+V +YN I GLCK V G+ ++ M PD++
Sbjct: 1100 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 1159
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+NT++ A+CK ++ EL ++ G NL TY+ ++ GL +A LL E
Sbjct: 1160 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 1219
Query: 373 LNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
K C+ + ++ I GLC+ V +A +L QM ++P V ++++SS+ K
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD-DVTYSIVISSLCKWR 1278
Query: 432 FVNTS 436
F++ +
Sbjct: 1279 FMDEA 1283
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 129/249 (51%), Gaps = 6/249 (2%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S+++ ++C+ + L E ++ M K +V Y +V+ L K ++ DA + ++M
Sbjct: 479 SILIHALCKAKRLPEAE--SWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM 536
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
++ G+ PD+V Y++V++ + A ++ + + VPDV TY+ INGLCK V
Sbjct: 537 RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTV 596
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + M G P+++TYNTL+ LCK+ ++ + E+++ M+ + + TY+ +
Sbjct: 597 DKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCL 656
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+GL + + EA +L E +KG C M T+ Q+ LEL++Q+ +
Sbjct: 657 INGLCNASRLEEAWRVLREMKDKG-CLPDRMTYGTLLRALQK---TNNLELVEQLLKEME 712
Query: 413 SPGARVWEA 421
+ W A
Sbjct: 713 ATEEGQWNA 721
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
M +T +I L + + A +L +M G+ +++ + +V+ G+ A ELF
Sbjct: 877 MFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFK 936
Query: 266 ELLVLGLVP-DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ G P DV+TY+ ++ L K V+ +++ M G P+V+TY++LL LCK
Sbjct: 937 EMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKA 996
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L+ L++ M G N+ TY+ +IDG G I EA LLEE ++ G +
Sbjct: 997 GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 1056
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ C+ G A+ L++ M +K P + +LL
Sbjct: 1057 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 1095
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 139/291 (47%), Gaps = 3/291 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R+ AI +L M+++GF + + + +L C+ + + L +++M G +V
Sbjct: 244 DRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV--ENALWLLEQMVTRGCPPDVV 301
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT VI L K ++V +A ++++M G +P+++ Y +++G D A EL ++
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G P+ TYN ++ C++N++E +++ M + G PD I Y+T++ CK +L
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+L+++M +G ++ S +ID L I A LL ++ +
Sbjct: 422 REAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSIL 481
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
I LC+ + +A L M P + + ++ + K +N +F+
Sbjct: 482 IHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNS-VVDGLCKSRRINDAFL 531
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 166/380 (43%), Gaps = 21/380 (5%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y+ +I L+++ + D +L+ + F F + ++ + A+R ++
Sbjct: 225 TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVD-NGFAPNVFSYNTVLHGFCKANRVEN 283
Query: 135 SVNLFYKI------PKF-----------RINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
++ L ++ P ++++V A +++ MI G + T ++
Sbjct: 284 ALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVD 343
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
C DL D + V++M + G+ + Y N++ ++ + A +L M G
Sbjct: 344 GFCRVGDL--DGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGC 401
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PD + Y+ +++G +A +L ++++ G PDV + I+ LCK +++ +
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQE 461
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ + PDV+ Y+ L+ ALCK + L + M ++ TY+ ++DGL
Sbjct: 462 LLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLC 521
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
I +A L + G+ + I C+ + A ++L++M + P
Sbjct: 522 KSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVV 581
Query: 418 VWEALLLSSVSKLDFVNTSF 437
+ A L++ + K V+ +F
Sbjct: 582 TYSA-LINGLCKAGTVDKAF 600
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 23/265 (8%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
+C P AY +I L + + + S LD + K + P+ + + ++ + R
Sbjct: 470 DCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCY--PDVVTYNSVVDGLCKSRRIN 527
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
D+ LF + M G D T S+++ S C+ +L D
Sbjct: 528 DAFLLFDR------------------MRAAGVMPDVVTYSIVIHSFCKDNNL--DSAFKM 567
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++ MK+ +V Y+ +I L K V A + +M G P++V Y +++G+
Sbjct: 568 LERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCK 627
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+A E+ + + PD TY INGLC + +E +++ M++ G PD +T
Sbjct: 628 INKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMT 687
Query: 314 YNTLLQALCKVRELNRLRELVKEMK 338
Y TLL+AL K L + +L+KEM+
Sbjct: 688 YGTLLRALQKTNNLELVEQLLKEME 712
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 3/216 (1%)
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
DG + +I C +LN ++ Y +A +LF + D TY+ I+G + +
Sbjct: 120 DGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILP 179
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ M G K + ++L+ LC + + +EM K + TY+ MI+
Sbjct: 180 AYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMIN 238
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL+ + +A LLEE ++ G ++ + G C+ V AL LL+QM + P
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298
Query: 415 GARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
V +++ + KLD V+ + R++D+++ C+
Sbjct: 299 DV-VSYTTVINGLCKLDQVDEA-CRVMDKMIQRGCQ 332
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 141/272 (51%), Gaps = 2/272 (0%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+ +LN M D + I+ S+C+ R + D+ L +EM+ G +V Y++
Sbjct: 205 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV--DDALNLFKEMETKGIRPNVVTYSS 262
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L + DA +L+ M I P++V + +++ + + +V+AE+L+D+++
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD++TYN +NG C + ++ +M M PDV+TYNTL++ CK + +
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL +EM +G+V + TY+ +I GL GD A + ++ ++ G+ + + GL
Sbjct: 383 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G + KALE+ M ++ ++ ++
Sbjct: 443 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 474
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++++ C + +S L + +M KLG+ +V ++++ +++ DA+ +++
Sbjct: 84 TYNILINCFCRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 141
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G +PD + +T +++G+ + +A L D ++ G P++ TY V +NGLCK+
Sbjct: 142 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 201
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + + ++ ME + DV+ +NT++ +LCK R ++ L KEM+ KGI N+ TYS
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 261
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I L S G +A LL + + K + F+ I + G +A +L M +
Sbjct: 262 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321
Query: 411 DVSPGARVWEALL 423
+ P + +L+
Sbjct: 322 SIDPDIFTYNSLV 334
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ T S +L+ C + +S + + V +M ++G+
Sbjct: 94 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS--DAVALVDQMVEMGYRPD 151
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I L K +A+ ++++M G +P++V Y +V+NG+ + D A L +
Sbjct: 152 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 211
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV +N I+ LCK +V+ + + ME G +P+V+TY++L+ LC
Sbjct: 212 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 271
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +L+ +M K I NL T++ +ID +G +EA L ++ + + + ++
Sbjct: 272 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 331
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C + KA ++ + M KD P + L+
Sbjct: 332 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 369
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D IEK+ N P + F LI + +F +
Sbjct: 254 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNALIDAFVKEGKFVE 310
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ L+ + K I+ F N ++N GFC+ R + ++ F+
Sbjct: 311 AEKLYDDMIKRSIDPDIFT---YNSLVN-GFCM-------------HDRLDKAKQMFEFM 353
Query: 195 QEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
CF +V Y +I+ K ++V D + +M G+ D V YT ++ G+
Sbjct: 354 VSKD----CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 409
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D A+++F +++ G+ PD+ TY++ ++GLC +E +++ M++ K D+
Sbjct: 410 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 469
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y T+++ +CK +++ +L + KG+ N+ TY+ MI GL SK + EA LL++
Sbjct: 470 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G S ++ I + G + EL+++M
Sbjct: 530 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 126/259 (48%), Gaps = 2/259 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ + + D ++ ++M++L G+ Y +I ++ ++ AL +L +M
Sbjct: 53 LLSAIAKMKKF--DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 110
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +P IV + +LNG + A L D+++ +G PD T+ I+GL N
Sbjct: 111 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 170
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ M + G +P+++TY ++ LCK + + L+ +M+ I ++ ++ +ID
Sbjct: 171 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 230
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + +A L +E KG+ + I LC G A +LL M +K ++P
Sbjct: 231 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 290
Query: 415 GARVWEALLLSSVSKLDFV 433
+ AL+ + V + FV
Sbjct: 291 NLVTFNALIDAFVKEGKFV 309
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 9/252 (3%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
F G DY ++R+ + K+ DA+G+ M P IV + +L+ + + +
Sbjct: 7 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 66
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L +++ L +V +YTYN+ IN C+++ + + ++ M +LG +P ++T ++LL
Sbjct: 67 ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 126
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C + ++ LV +M G + T++ +I GL EA L++ + +G
Sbjct: 127 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 186
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
+ + GLC+RG AL LL +M + ++ ++ S+ K R
Sbjct: 187 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT-IIDSLCKY--------RH 237
Query: 441 VDQILNTPCKME 452
VD LN +ME
Sbjct: 238 VDDALNLFKEME 249
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
D+ D+ +G M K +V++ ++ ++ K +K + + +M+ I +
Sbjct: 24 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 83
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++N + A L +++ LG P + T + +NG C + + ++ M
Sbjct: 84 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E+G +PD IT+ TL+ L + + LV M +G NL TY ++++GL +GD
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A LL + + +F+ I LC+ V AL L K+M K + P + +L
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263
Query: 423 L 423
+
Sbjct: 264 I 264
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 54/234 (23%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDG 164
LIK + + R +D LF ++ F A ++ M++DG
Sbjct: 368 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 427
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D T S++L +C L ++ L M+K + YT +I + K KV D
Sbjct: 428 VPPDIMTYSILLDGLCNNGKL--EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 485
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ + G+KP++V TYN I+
Sbjct: 486 GWDLFCSLSLKGVKPNVV-----------------------------------TYNTMIS 510
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
GLC + ++ ++ M+E G P+ TYNTL++A + + EL++EM+
Sbjct: 511 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 564
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 141/272 (51%), Gaps = 2/272 (0%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+ +LN M D + I+ S+C+ R + D+ L +EM+ G +V Y++
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV--DDALNLFKEMETKGIRPNVVTYSS 300
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L + DA +L+ M I P++V + +++ + + +V+AE+L+D+++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD++TYN +NG C + ++ +M M PDV+TYNTL++ CK + +
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL +EM +G+V + TY+ +I GL GD A + ++ ++ G+ + + GL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G + KALE+ M ++ ++ ++
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++++ C + +S L + +M KLG+ +V ++++ +++ DA+ +++
Sbjct: 122 TYNILINCFCRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G +PD + +T +++G+ + +A L D ++ G P++ TY V +NGLCK+
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + + ++ ME + DV+ +NT++ +LCK R ++ L KEM+ KGI N+ TYS
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I L S G +A LL + + K + F+ I + G +A +L M +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 411 DVSPGARVWEALL 423
+ P + +L+
Sbjct: 360 SIDPDIFTYNSLV 372
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ T S +L+ C + +S + + V +M ++G+
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS--DAVALVDQMVEMGYRPD 189
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I L K +A+ ++++M G +P++V Y +V+NG+ + D A L +
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV +N I+ LCK +V+ + + ME G +P+V+TY++L+ LC
Sbjct: 250 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +L+ +M K I NL T++ +ID +G +EA L ++ + + + ++
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C + KA ++ + M KD P + L+
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D IEK+ N P + F LI + +F +
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNALIDAFVKEGKFVE 348
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ L+ + K I+ F N ++N GFC+ R + ++ F+
Sbjct: 349 AEKLYDDMIKRSIDPDIFT---YNSLVN-GFCM-------------HDRLDKAKQMFEFM 391
Query: 195 QEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
CF +V Y +I+ K ++V D + +M G+ D V YT ++ G+
Sbjct: 392 VSKD----CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D A+++F +++ G+ PD+ TY++ ++GLC +E +++ M++ K D+
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y T+++ +CK +++ +L + KG+ N+ TY+ MI GL SK + EA LL++
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G S ++ I + G + EL+++M
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 126/259 (48%), Gaps = 2/259 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ + + D ++ ++M++L G+ Y +I ++ ++ AL +L +M
Sbjct: 91 LLSAIAKMKKF--DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +P IV + +LNG + A L D+++ +G PD T+ I+GL N
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ M + G +P+++TY ++ LCK + + L+ +M+ I ++ ++ +ID
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + +A L +E KG+ + I LC G A +LL M +K ++P
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 415 GARVWEALLLSSVSKLDFV 433
+ AL+ + V + FV
Sbjct: 329 NLVTFNALIDAFVKEGKFV 347
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 9/252 (3%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
F G DY ++R+ + K+ DA+G+ M P IV + +L+ + + +
Sbjct: 45 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 104
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L +++ L +V +YTYN+ IN C+++ + + ++ M +LG +P ++T ++LL
Sbjct: 105 ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C + ++ LV +M G + T++ +I GL EA L++ + +G
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
+ + GLC+RG AL LL +M + ++ ++ S+ K R
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT-IIDSLCKY--------RH 275
Query: 441 VDQILNTPCKME 452
VD LN +ME
Sbjct: 276 VDDALNLFKEME 287
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
D+ D+ +G M K +V++ ++ ++ K +K + + +M+ I +
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++N + A L +++ LG P + T + +NG C + + ++ M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E+G +PD IT+ TL+ L + + LV M +G NL TY ++++GL +GD
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A LL + + +F+ I LC+ V AL L K+M K + P + +L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 423 L 423
+
Sbjct: 302 I 302
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 54/234 (23%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDG 164
LIK + + R +D LF ++ F A ++ M++DG
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D T S++L +C L ++ L M+K + YT +I + K KV D
Sbjct: 466 VPPDIMTYSILLDGLCNNGKL--EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ + G+KP++V TYN I+
Sbjct: 524 GWDLFCSLSLKGVKPNVV-----------------------------------TYNTMIS 548
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
GLC + ++ ++ M+E G P+ TYNTL++A + + EL++EM+
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 143/267 (53%), Gaps = 2/267 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R G A+ +L+ M+ G D T +++L + C++ + + + EM+ G ++
Sbjct: 170 GRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYK--QAMKLLDEMRAKGCAPDII 227
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y V+ + ++ +V DA+ L + S G +P+ V Y +VL G+ E + AE+L E+
Sbjct: 228 TYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 287
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G P+V T+N+ I+ LC++ VE ++++ + + G P+ ++YN +L A CK +++
Sbjct: 288 SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKM 347
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+R V+ M +G ++ +Y+ ++ L G++ A LL + +KG ++
Sbjct: 348 DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTV 407
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I GL + G ++ALELL +M K + P
Sbjct: 408 IDGLTKAGKTKEALELLNEMVTKGLQP 434
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 156/315 (49%), Gaps = 21/315 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L S + CEP +Y+ V+K L ++ D ++ + ++ + F LI
Sbjct: 248 FLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQK-GYPPNVVTFNMLISFL 306
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ ++ + +IPK+ G + + + IL + C+Q+ +
Sbjct: 307 CRRGLVEPAMEVLDQIPKY------------------GCTPNSLSYNPILHAFCKQKKM- 347
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + FV+ M G +V Y ++ +L + +V A+ +L+Q+K G P ++ Y
Sbjct: 348 -DRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ +A EL +E++ GL PD+ TY+ +GLC+++ +E I+ ++++G
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P+ + YN +L LCK RE + +L M G + N TY+I+I+GL +G + EA
Sbjct: 467 IRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEAR 526
Query: 367 GLLEEALNKGLCTQS 381
LL E ++G+ ++
Sbjct: 527 ELLGELCSRGVVSKG 541
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 112/217 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +IR L + + +AL +L+ M G PD+V YT++L + Y +A +L DE+
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD+ TYNV +NG+C++ V+ I+ + + G +P+ ++YN +L+ LC
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L+ EM KG N+ T++++I L +G + A +L++ G S ++ +
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C++ + +A+ ++ M + P + LL +
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTA 375
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 133/276 (48%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV AIE L + + G + + +++L +C E L + EM + G+ +V
Sbjct: 240 GRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKL--MAEMSQKGYPPNVV 297
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I L ++ V A+ +L+Q+ G P+ + Y +L+ Q+ +A + +
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G PD+ +YN + LC+ V+A ++++ +++ G P +I+YNT++ L K +
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 417
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL+ EM KG+ ++ TYS + GL + I EA + + G+ + +++
Sbjct: 418 KEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAI 477
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+R A++L M P + L+
Sbjct: 478 LLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILI 513
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 95/187 (50%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++PD Y ++ G+ + A + D++L G VPDV TY + + CK++ + +
Sbjct: 152 MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAM 211
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K++ M G PD+ITYN ++ +C+ ++ E +K + G N +Y+I++ GL
Sbjct: 212 KLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGL 271
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +A L+ E KG F+ I LC+RGLV A+E+L Q+ +P +
Sbjct: 272 CTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS 331
Query: 417 RVWEALL 423
+ +L
Sbjct: 332 LSYNPIL 338
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 173/394 (43%), Gaps = 43/394 (10%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI-KTYADAHRFQ 133
C P Y +++ + S + +LD E R P+ I +++ R
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLD--EMRAKGCAPDIITYNVVVNGICQEGRVD 243
Query: 134 DSVNLFYKIPKF--RINRVGFAI---------------EILNCMINDGFCVDGKTCSLIL 176
D++ +P N V + I +++ M G+ + T ++++
Sbjct: 244 DAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLI 303
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
S +C +R L + + + ++ K G + Y ++ + K++K+ A+ + M S G
Sbjct: 304 SFLC-RRGLV-EPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
PDIV Y +L + + A EL +L G P + +YN I+GL K + +
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK---EMKWKGIVLNLQTYSIMI 353
+++ M G +PD+ITY+T+ LC RE +R+ E ++ +++ GI N Y+ ++
Sbjct: 422 ELLNEMVTKGLQPDIITYSTISSGLC--RE-DRIEEAIRAFCKVQDMGIRPNTVLYNAIL 478
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GL + + A L ++ G S + I GL GLV++A ELL ++ + V
Sbjct: 479 LGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV- 537
Query: 414 PGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
VSK +N + IRL+D +T
Sbjct: 538 -------------VSK-GLINKAAIRLLDGTTHT 557
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PDV YN + G C ++A +++A ++ +PD TYNTL++ LC +
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVA---DMPMEPDSYTYNTLIRGLCGRGRTGNALVV 178
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ +M +G V ++ TY+I+++ + +A LL+E KG ++ + G+CQ
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
G V A+E LK + P + +L
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVL 268
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTY--NVYINGLCKQNNVEAGIKMIACMEEL 305
L G++ + D +A L + + GL P I LC +++A E
Sbjct: 66 LRGLVRRGDLEEALRLVESMS--GLEPSAAPGPCAALIKKLCASGRTAEARRVLAACE-- 121
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
PDV+ YN ++ C +L+ R LV +M + + TY+ +I GL +G A
Sbjct: 122 ---PDVMAYNAMVAGYCVTGQLDAARRLVADMPMEP---DSYTYNTLIRGLCGRGRTGNA 175
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L++ L +G + + C+R ++A++LL +M K +P
Sbjct: 176 LVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAP 224
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 126/229 (55%), Gaps = 1/229 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ L K +++ DAL + +M + GIKPD Y VL+G+ +E +A LF++++
Sbjct: 117 YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 176
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ P+V TYN INGLCK +E ++ M G P ++YNTL+ CK ++L
Sbjct: 177 KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 236
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+++ +M V N+ TY+ +IDGL+ G + A +L+ + KG+ + + I
Sbjct: 237 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLI 296
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
G C+ V +A +LL+QM + ++P + +LL+S+ + D + +F
Sbjct: 297 DGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN-ILLNSLCRADKLEDAF 344
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 148/312 (47%), Gaps = 22/312 (7%)
Query: 79 PPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP+A Y +++ L + + D + ++ + R + FI+ ++ + +++
Sbjct: 111 PPDALTYGPIVERLCKTKRIDDALATVEEMATR-GIKPDAFIYNFVLSGLCQEEKVEEAR 169
Query: 137 NLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
LF K+ K RIN R+ A E+ M G+ + + ++
Sbjct: 170 LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 229
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C+++DL + + +M + +V YT +I L K KV A +L+ M G+ P
Sbjct: 230 CKKKDLVAAK--DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 287
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++ Y+ +++G +A +L ++++ G+ P V TYN+ +N LC+ + +E K+
Sbjct: 288 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M + P V+TYNTLL+ALC ++L+ L EM KG + TY + GL
Sbjct: 348 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 407
Query: 360 GDIIEACGLLEE 371
G + EA L+E+
Sbjct: 408 GKVHEAQELMEK 419
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 133/278 (47%), Gaps = 3/278 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++NRV A E++ M D T I+ +C+ + + D+ L V+EM G
Sbjct: 92 KLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRI--DDALATVEEMATRGIKPD 148
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y V+ L ++EKV +A + +M I P++V Y ++NG+ A ELF
Sbjct: 149 AFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFK 208
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G VP +YN I+G CK+ ++ A + M P+V+TY TL+ L K
Sbjct: 209 EMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSG 268
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ E++ M KG+ N+ TYS +IDG + EA LLE+ + +G+ ++
Sbjct: 269 KVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYN 328
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ LC+ + A +L + MA + P + LL
Sbjct: 329 ILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 158/357 (44%), Gaps = 19/357 (5%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I L + F D + L H + + F+ + +I +R +++ L K
Sbjct: 47 GYGILISCLCKVGNF-DEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEK 105
Query: 142 IPKF----------------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ ++ + R+ A+ + M G D + +LS +C++ +
Sbjct: 106 MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 165
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
LL ++M K +V Y +I L K ++ A + +M G P V Y
Sbjct: 166 EEARLL--FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYN 223
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++G ++D V A+++FD+++ VP+V TY I+GL K V+A +++ M +
Sbjct: 224 TLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 283
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P+V TY+ L+ CKVR ++ +L+++M +GI + TY+I+++ L + +A
Sbjct: 284 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA 343
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
L + ++ + LC + A L +M K P A ++ L
Sbjct: 344 FKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 400
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
Y+ IN LCK N VE ++I M + PD +TY +++ LCK + ++ V+EM
Sbjct: 82 AYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIVERLCKTKRIDDALATVEEM 140
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+GI + Y+ ++ GL + + EA L E+ + + + ++ I GLC+ +
Sbjct: 141 ATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRI 200
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
A EL K+MA K P + L+ K D V + D+++ + C
Sbjct: 201 ETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDV--FDKMVRSNC 250
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 85/185 (45%), Gaps = 1/185 (0%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P + V +G + +E++ ++ G Y + I+ LCK N + K+
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M K I Y+T++ LCK+ + REL+++M + + TY +++ L
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLCK 126
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
I +A +EE +G+ + +++ + GLCQ V +A L ++M + ++P
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186
Query: 419 WEALL 423
+ L+
Sbjct: 187 YNTLI 191
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A E+L+ M+ G + T S ++ C+ R + DE +++M G +V
Sbjct: 268 GKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV--DEAHKLLEQMVTQGIAPTVV 325
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ SL + +K+ DA + M P +V Y +L + + A L+ E+
Sbjct: 326 TYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEM 385
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
+ G PD TY+ GL + V +++ M+ P
Sbjct: 386 IAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 3/177 (1%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
++P T+N +G K +E ++ M E G Y L+ LCKV +
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L+ M+ K YS +I+ L + EA L+E+ + + + + + L
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEK-MARYAPPDALTYGPIVERL 124
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILN 446
C+ + AL +++MA + + P A ++ +L L K++ F ++V Q +N
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181
>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 257
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 111/212 (52%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM + G ++ Y +I S + DA +L M I PDIV ++ ++N + +
Sbjct: 35 EMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKER 94
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+AEE++ E+L + P TYN I+G CKQ+ V+ +M+ M G PDV+T++
Sbjct: 95 KVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFS 154
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ CK + ++ E+ EM +GIV N TY+ +I G GD+ A LL E ++
Sbjct: 155 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 214
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G+ F + GLC + +RKA +L+ +
Sbjct: 215 GVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M IK D+V T +++ + +++ A+ LF E+ G+ P+V TYN I+ C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+++ M E PD++T++ L+ A K R+++ E+ KEM I TY+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
MIDG + + +A +L+ +KG F I G C+ V +E+ +M +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 412 VSPGARVWEALL 423
+ + L+
Sbjct: 181 IVANTVTYTTLI 192
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 97/220 (44%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T ++ L K +A + +M GI P+++ Y +++ + A++L ++
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD+ T++ IN K+ V ++ M P ITYN+++ CK ++
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ ++ M KG ++ T+S +I+G + + E +G+ + + I
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G CQ G + A +LL +M V+P + +L SK
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 233
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 24/202 (11%)
Query: 158 NCMINDGFCVDGK---------------------TCSLILSSVCEQRDLSSDELLGFVQE 196
NCMI D FC G+ T S ++++ ++R +S E + +E
Sbjct: 49 NCMI-DSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI--YKE 105
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M + + Y ++I K+++V DA +L+ M S G PD+V ++ ++NG +
Sbjct: 106 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 165
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
E+F E+ G+V + TY I+G C+ +++A ++ M G PD IT++
Sbjct: 166 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 317 LLQALCKVRELNRLRELVKEMK 338
+L LC +EL + ++++++
Sbjct: 226 MLAGLCSKKELRKAFAILEDLQ 247
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDH-IEKRENFETPEFI-FID 121
L + +H I+ P Y+ +I + + ++ D +L H IEK+ N P+ + F
Sbjct: 32 LFTEMHEKGIF---PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN---PDIVTFSA 85
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEI-LNCMINDGFCVDGKTCSLILSSVC 180
LI + + ++ ++ ++ ++ I F I N MI DGFC +
Sbjct: 86 LINAFVKERKVSEAEEIYKEMLRWSI----FPTTITYNSMI-DGFCKQDRV--------- 131
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
D+ + M G +V ++ +I K ++V + + I +M GI +
Sbjct: 132 -------DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
V YT +++G D A++L +E++ G+ PD T++ + GLC + + K A
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR---KAFA 241
Query: 301 CMEELGSKPD 310
+E+L D
Sbjct: 242 ILEDLQKSED 251
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 160/339 (47%), Gaps = 16/339 (4%)
Query: 98 DISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL 157
DIS+ H +R LI TY D ++F+++ + A +
Sbjct: 16 DISNSFTHFVER------------LIYTYKDWGSDPHVFDVFFQVL-VEAGLLNEARKFF 62
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
+ ++N G + +C+L L+ + +RD+ +L E +LG C+ Y ++ SL
Sbjct: 63 DKLLNYGVALSAGSCNLYLTCLSSKRDMLG-MVLKVFSEFPQLGVCWNTESYNILMNSLF 121
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
+ K+ +A +L +M+ G PD+V YT +++G + K +L E+ + GL P++Y
Sbjct: 122 RLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLY 181
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TY+ I LCK V G K++ M + G PD + Y TL+ CK+ +L EM
Sbjct: 182 TYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM 241
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ + IV + +S +I GL+ G ++EA L E + KG + I G C+ G +
Sbjct: 242 EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEM 301
Query: 398 RKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVN 434
+KA L QM ++P + AL L +LD N
Sbjct: 302 KKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTAN 340
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 165/357 (46%), Gaps = 21/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ + +P Y +I L ++ + + VL + KR F I+ LI +
Sbjct: 167 LVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVF-PDHVIYTTLIDGF 225
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
Q + LF ++ I A L C G GK +
Sbjct: 226 CKLGNTQAAYKLFSEMEAREIVPDSIAFSALIC----GLSGSGKV-------------VE 268
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+D+L EM K GF V YT +I K ++ A + NQM G+ P++V YT
Sbjct: 269 ADKLF---NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTA 325
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ +G+ + A EL E+ GL ++ TYN +NGLCK N+ +K++ M+E G
Sbjct: 326 LADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG 385
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD ITY TL+ A K E+ + REL++EM +G+ + T++++++GL G + +
Sbjct: 386 LHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE 445
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL+ L KG+ ++ ++ + C R +R + E+ + M + V P + + L+
Sbjct: 446 RLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILI 502
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 162/343 (47%), Gaps = 23/343 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P A+ +I L+ + + + + + + K+ FE E + LI Y
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKK-GFEPDEVTYTALIDGYC---------- 296
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQE 196
++ + A + N M+ G + T + + +C+ +L +++ELL E
Sbjct: 297 --------KLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELL---HE 345
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M + G + Y ++ L K + A+ ++ +MK G+ PD + YT +++ +
Sbjct: 346 MCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGE 405
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
VKA EL E+L GL P V T+NV +NGLC +E G +++ M E G P+ TYN+
Sbjct: 406 MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNS 465
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+++ C + E+ + M +G+V + TY+I+I G ++ EA L +E + K
Sbjct: 466 IMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKR 525
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+S ++ I G +R + +A +L ++M + + A ++
Sbjct: 526 FNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIY 568
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 138/279 (49%), Gaps = 2/279 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
FR+ ++ A +L M G D + + I+ C +L +++ V+EM+ G
Sbjct: 121 FRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQ--KVVQLVKEMQLKGLKP 178
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y+++I L K KV + +L +M G+ PD V YT +++G + A +LF
Sbjct: 179 NLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLF 238
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ +VPD ++ I GL V K+ M + G +PD +TY L+ CK+
Sbjct: 239 SEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKL 298
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
E+ + L +M G+ N+ TY+ + DGL G++ A LL E KGL S +
Sbjct: 299 GEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTY 358
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + GLC+ G + +A++L+++M + + P + L+
Sbjct: 359 NTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 164/367 (44%), Gaps = 24/367 (6%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P A Y+ VI + ++ + +R ++ + +I + R ++
Sbjct: 181 PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEA 240
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK--TCSLILSSVCEQ----------- 182
V +F ++ V + N +I G+C GK T L + E+
Sbjct: 241 VKVFDEM--LTKGEVKPEAVMYNALIG-GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 297
Query: 183 ------RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
D E V+EM G + Y +I K+ V AL I M G
Sbjct: 298 LVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRG 357
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++ +V YT ++ + + + ++LFDE + G+ PD+ YN IN N++
Sbjct: 358 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 417
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ ME+ PD +TYNTL++ LC + ++ R+L+ EM +GI +L TY+ +I G
Sbjct: 418 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 477
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ KGD+ +A + E +NKG ++ I GLC+ G A ++K+M + ++P
Sbjct: 478 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 537
Query: 417 RVWEALL 423
+ +L+
Sbjct: 538 STYISLI 544
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 2/248 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F R A E++ M G +D T +++++ C++ ++ + L + M + G
Sbjct: 303 FMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVK--KALEIFENMSRRGVRA 360
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V YT++I +L KK +V + + ++ GI+PD+V Y ++N + +A E+
Sbjct: 361 TVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 420
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PD TYN + GLC V+ K+I M + G +PD++TYNTL+
Sbjct: 421 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMK 480
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ + EM KG L TY+ +I GL G +A +++E + G+ S +
Sbjct: 481 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 540
Query: 385 DETICGLC 392
I GL
Sbjct: 541 ISLIEGLT 548
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 144/301 (47%), Gaps = 6/301 (1%)
Query: 148 NRVGFAIEILNCMI-NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG- 205
RV A++I+ M G + T ++S C+ + DE + EM G
Sbjct: 199 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV--DEAVKVFDEMLTKGEVKPE 256
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I + K+ AL ++M G+ + Y ++++ + + +A EL +
Sbjct: 257 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 316
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL DV+TYN+ ING CK+ NV+ +++ M G + V+TY +L+ AL K
Sbjct: 317 EMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKG 376
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L E +GI +L Y+ +I+ ++ G+I A ++ E K + ++
Sbjct: 377 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 436
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ GLC G V +A +L+ +M + + P + L+ K D + +R+ ++++
Sbjct: 437 TLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDA--LRIRNEMM 494
Query: 446 N 446
N
Sbjct: 495 N 495
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
LF ++ L L T+N+ + LC ++++ M +P+ +TYNT++ C
Sbjct: 141 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFC 196
Query: 323 KVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG-LCTQ 380
+ ++++EM+ + GI N TY +I G G + EA + +E L KG + +
Sbjct: 197 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 256
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ M++ I G C +G + AL +M ++ V+
Sbjct: 257 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 289
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EI+ M D T + ++ +C + DE + EM K G +V Y +
Sbjct: 416 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV--DEARKLIDEMTKRGIQPDLVTYNTL 473
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K V DAL I N+M + G P ++ Y ++ G+ AE + E++ G+
Sbjct: 474 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 533
Query: 273 VPDVYTYNVYINGLCKQN 290
PD TY I GL ++
Sbjct: 534 TPDDSTYISLIEGLTTED 551
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 147/285 (51%), Gaps = 7/285 (2%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
DAH + ++ K+ R+G A+++L M + GF T +++L S C R+
Sbjct: 342 DAHTYSILIHGLCKL-----GRLGSAMKLLREMEDKGFAPSIVTYTILLHSFC--RNGMW 394
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D + ++ M G + Y +I ++ K ++ DA+ + +MKS G KPDI Y +
Sbjct: 395 DNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTI 454
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ + +AE LF+ LL G+V + TYN I+ L + + + I + M G
Sbjct: 455 IYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGC 514
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
D+++YN L++ALC+ ++R L+ EM KGI N +Y+++I L + +A
Sbjct: 515 SLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALE 574
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
L +E LN+ L ++ I GLC+ G + AL LL+++ ++DV
Sbjct: 575 LSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDV 619
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 168/414 (40%), Gaps = 62/414 (14%)
Query: 49 PPTKQQQQIP--------KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDIS 100
PP ++ IP + H+L L H F++ P +Y+ V+ A D+
Sbjct: 100 PPLRESLLIPLFRSLAPGRALHLLDQLPHRFAV---SPSFRSYNTVLAAFARADCHTDVL 156
Query: 101 SVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCM 160
S+ + R+ F F + R+ R A+ +L M
Sbjct: 157 SLYRRMVHRDRVPPTTFTFSIAARALC------------------RLGRADEALTMLRSM 198
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
G D ++ ++C Q + +E + EM +G + + +++ L
Sbjct: 199 ARHGCVPDTVLYQTVIHALCAQGGV--NEAATLLDEMFLMGCSADVNTFNDIVHGLCTLG 256
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGV----------------------------- 251
++ +A ++++M G P+ + Y +L G+
Sbjct: 257 RLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIG 316
Query: 252 --IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
++ +A EL++ + G PD +TY++ I+GLCK + + +K++ ME+ G P
Sbjct: 317 RCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAP 376
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
++TY LL + C+ + +R +++ M KG+ +NL+ Y+ MI + + +A +
Sbjct: 377 SIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFM 436
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+E ++G ++ I LC + +A L + + + V A + L+
Sbjct: 437 QEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLI 490
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 138/294 (46%), Gaps = 4/294 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ M + G D T S+++ +C+ L S + ++EM+ GF +V YT +
Sbjct: 327 AAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSA--MKLLREMEDKGFAPSIVTYTIL 384
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ S + + +L M G+ ++ Y ++ V A E+ G
Sbjct: 385 LHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGY 444
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ TYN I LC N +E + + G + ITYNTL+ AL +
Sbjct: 445 KPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAIS 504
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +M G L++ +Y+ +I L G++ + LL E KG+ + ++ I LC
Sbjct: 505 LANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELC 564
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ VR ALEL K+M +++++P + L++ + K+ +++ + + L++++ N
Sbjct: 565 KTRRVRDALELSKEMLNQELTPDIVTYNT-LINGLCKMGWMHAA-LNLLEKLHN 616
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 4/217 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
++ R+L + + +AL +L M G PD V Y V++ + Q +A L DE+
Sbjct: 175 FSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMF 234
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
++G DV T+N ++GLC + +++ M G P+ ITY LL+ LC ++
Sbjct: 235 LMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVE 294
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R ++ + +VL ++ +I G + EA L E +KG + + I
Sbjct: 295 EARTMLGRVPELNVVL----FNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILI 350
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GLC+ G + A++LL++M DK +P + LL S
Sbjct: 351 HGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHS 387
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 172/417 (41%), Gaps = 64/417 (15%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
++L S + + C P Y VI L + +++LD E F L+
Sbjct: 193 TMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLD-----EMF---------LMGC 238
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
AD + F D V+ + + R A +++ M+ G + T +L +C +
Sbjct: 239 SADVNTFNDIVHGLCTLGRLR-----EAARLVDRMMIRGCVPNAITYGFLLKGLCLASQV 293
Query: 186 S-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ +LG V E+ +V + VI + K+ +A + M S G PD Y
Sbjct: 294 EEARTMLGRVPELN-------VVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTY 346
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ---NNVEA------- 294
+++++G+ A +L E+ G P + TY + ++ C+ +N+ A
Sbjct: 347 SILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSD 406
Query: 295 --------GIKMIAC-----------------MEELGSKPDVITYNTLLQALCKVRELNR 329
G + C M+ G KPD+ TYNT++ LC ++
Sbjct: 407 KGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEE 466
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L + + +G+V N TY+ +I L G +A L + + G ++ I
Sbjct: 467 AEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIK 526
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
LC+ G V +++ LL +MA+K + P V LL+S + K V + + L ++LN
Sbjct: 527 ALCRDGNVDRSIMLLSEMAEKGIKPN-NVSYNLLISELCKTRRVRDA-LELSKEMLN 581
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 136/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRJAQ--SVFDAITKWGLRPSVVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 302 HHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P AR + ++
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 394
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 108/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 172
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A L+ +M+ K + P + L+
Sbjct: 293 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A L D
Sbjct: 247 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ V GL PD TY I+G CK+ ++++ + M + + D + Y L+ LC+
Sbjct: 307 EMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 367 RSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDG 417
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 231 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 288
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 289 IYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENI 348
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ + +
Sbjct: 349 RLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXK 408
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 409 LLKEMQRDGHVPSVVTYNVLMNG 431
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 164/367 (44%), Gaps = 24/367 (6%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P A Y+ VI + ++ + +R ++ + +I + R ++
Sbjct: 510 PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEA 569
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK--TCSLILSSVCEQR---------- 183
V +F ++ V + N +I G+C GK T L + E+
Sbjct: 570 VKVFDEM--LTKGEVKPEAVMYNALIG-GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 626
Query: 184 -------DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
D E V+EM G + Y +I K+ V AL I M G
Sbjct: 627 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 686
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++ +V YT ++ + + + ++LFDE + G+ PD+ YN IN N++
Sbjct: 687 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 746
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ ME+ PD +TYNTL++ LC + ++ R+L+ EM +GI +L TY+ +I G
Sbjct: 747 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 806
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ KGD+ +A + E +NKG ++ I GLC+ G A ++K+M + ++P
Sbjct: 807 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 866
Query: 417 RVWEALL 423
+ +L+
Sbjct: 867 STYISLI 873
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 6/301 (1%)
Query: 148 NRVGFAIEILNCMI-NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG- 205
RV A++I+ M G + T ++S C+ + DE + EM G
Sbjct: 528 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV--DEAVKVFDEMLTKGEVKPE 585
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I + K+ AL ++M G+ + Y ++++ + + +A EL +
Sbjct: 586 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 645
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL PDV+TYN+ ING CK+ NV+ +++ M G + V+TY L+ AL K
Sbjct: 646 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 705
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L E +GI +L Y+ +I+ ++ G+I A ++ E K + ++
Sbjct: 706 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 765
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ GLC G V +A +L+ +M ++ + P + L+ K D + +R+ ++++
Sbjct: 766 TLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA--LRIRNEMM 823
Query: 446 N 446
N
Sbjct: 824 N 824
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F R A E++ M G D T +++++ C++ ++ + L + M + G
Sbjct: 632 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK--KALEIFENMSRRGVRA 689
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V YT +I +L KK +V + + ++ GI+PD+V Y ++N + +A E+
Sbjct: 690 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 749
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PD TYN + GLC V+ K+I M E G +PD++TYNTL+
Sbjct: 750 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 809
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ + EM KG L TY+ +I GL G +A +++E + G+ S +
Sbjct: 810 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 869
Query: 385 DETICGL 391
I GL
Sbjct: 870 ISLIEGL 876
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
LF ++ L L T+N+ + LC ++++ M +P+ +TYNT++ C
Sbjct: 470 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFC 525
Query: 323 KVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG-LCTQ 380
+ ++++EM+ + GI N TY +I G G + EA + +E L KG + +
Sbjct: 526 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 585
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ M++ I G C +G + AL +M ++ V+
Sbjct: 586 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 618
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 143/296 (48%), Gaps = 7/296 (2%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
D H + V+ K K + A+ ++ + +G T + +L+ +C+ L
Sbjct: 33 DIHTYTTIVDWLAKNKKIQ-----EAVALMEKITANGCTPTIATYNALLNGLCKMGRL-- 85
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E + ++++ G +V YT++I L KK++ F+A + +M S G+ D VCYT +
Sbjct: 86 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTAL 145
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G++ +A ++ + G VPDV T + I+GLCK + A +++ ME G
Sbjct: 146 IRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGL 205
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P+ + Y+ L+ LCK R+++ E++ +MK + TY+I+IDGL GD+ A
Sbjct: 206 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARA 265
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+E L G ++ I G C+ G A + M+ SP + L+
Sbjct: 266 FFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLI 321
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 156/360 (43%), Gaps = 23/360 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
+L+ + C P Y+ ++ L + + + +L I +N TP+ + + LI
Sbjct: 55 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV--DNGCTPDVVTYTSLID 112
Query: 125 TYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCV 167
R ++ LF ++ + ++ A + M + G
Sbjct: 113 GLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 172
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T S ++ +C+ + + + + M+ G V Y+ +I L K K+ AL
Sbjct: 173 DVVTLSTMIDGLCKAGRIGA--AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 230
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L QMK PD + Y ++++G+ D A FDE+L G PDVYTYN+ I+G C
Sbjct: 231 MLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFC 290
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K N +A + M P+V+TY TL+ LCK R+L + + MK +G +
Sbjct: 291 KAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSF 350
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
YS ++DGL G + C L +E G+ S I LC+ V +A+ L +
Sbjct: 351 VYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAI 409
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ AI++L ++++G D T + ++ + +++ S E +EM G
Sbjct: 81 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKK--RSFEAYKLFKEMASRGLALD 138
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT +IR L++ K+ A + M S G PD+V + +++G+ A +F
Sbjct: 139 TVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFK 198
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ GL P+ Y+ I+GLCK ++ ++M+A M++ PD ITYN L+ LCK
Sbjct: 199 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 258
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ R EM G ++ TY+I+I G G+ ACG+ ++ + +
Sbjct: 259 DVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYG 318
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+R + KA + M ++ P + V+ +L+
Sbjct: 319 TLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLV 356
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 116/229 (50%), Gaps = 10/229 (4%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
++ +I LVK + A + + ++G DI YT +++ + + +A L +++
Sbjct: 2 FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P + TYN +NGLCK +E I ++ + + G PDV+TY +L+ L K +
Sbjct: 62 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG----LCTQSSMF 384
+L KEM +G+ L+ Y+ +I GL G I +A + + ++G + T S+M
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
D GLC+ G + A+ + K M + ++P V+ AL+ L K+D
Sbjct: 182 D----GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 226
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 2/258 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
QE G + YT ++ L K +K+ +A+ ++ ++ ++G P I Y +LNG+
Sbjct: 21 LAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLC 80
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A +L +++ G PDV TY I+GL K+ K+ M G D +
Sbjct: 81 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTV 140
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y L++ L + ++ + + K M +G V ++ T S MIDGL G I A + +
Sbjct: 141 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 200
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+GL ++ I GLC+ + ALE+L QM +P + L+ D
Sbjct: 201 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 260
Query: 433 VNTSFIRLVDQILNTPCK 450
D++L CK
Sbjct: 261 AAAR--AFFDEMLEAGCK 276
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 116/319 (36%), Gaps = 60/319 (18%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
Q +IP+ SS+ + + C P +I L + + + +E R
Sbjct: 151 QAGKIPQA----SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR-GL 205
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCV-DGKT 171
E ++ LI A + ++ + ++ K FC D T
Sbjct: 206 APNEVVYSALIHGLCKARKMDCALEMLAQMKK-------------------AFCTPDTIT 246
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
++++ +C+ D+++ F EM + G + Y +I K A G+ +
Sbjct: 247 YNILIDGLCKSGDVAAAR--AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M S P++V Y +++G+ + KA + + G PD + Y+ ++GLCK
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364
Query: 292 VEAGIKMIACMEELG---------------------------------SKPDVITYNTLL 318
+E G + ME G P YN+++
Sbjct: 365 LEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSII 424
Query: 319 QALCKVRELNRLRELVKEM 337
AL K ++N + + +EM
Sbjct: 425 SALIKSGKVNEGQAVYQEM 443
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 58/111 (52%)
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T++ L+ L K L + L +E G +++ TY+ ++D LA I EA L+E+
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + ++ + GLC+ G + +A++LL+++ D +P + +L+
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 111
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 157/350 (44%), Gaps = 13/350 (3%)
Query: 81 EAYHFVIKTLAENSQFC-DISSVLDHIEKRENFETPEFIFID---LIKTYADAHRFQDSV 136
E V K+L E C SSV D + K ID I A AH F V
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVK----SYSRLSLIDKALSIVHLAQAHGFMPGV 169
Query: 137 NLFYKI--PKFRINR-VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+ + R R + FA + M+ + T ++++ C ++ D L
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI--DVALTL 227
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+M+ G +V Y +I K K+ D +L M G++P+++ Y +V+NG+
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ + + E+ G D TYN I G CK+ N + M A M G P VIT
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y +L+ ++CK +NR E + +M+ +G+ N +TY+ ++DG + KG + EA +L E
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++ I G C G + A+ +L+ M +K +SP + +L
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ V F +L M G+ +D T + ++ C++ + + L EM + G
Sbjct: 290 RMKEVSF---VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH--QALVMHAEMLRHGLTPS 344
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV-KAEELF 264
++ YT++I S+ K + A+ L+QM+ G+ P+ YT +++G Q+ Y+ +A +
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG-FSQKGYMNEAYRVL 403
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ G P V TYN ING C +E I ++ M+E G PDV++Y+T+L C+
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+++ + +EM KGI + TYS +I G + EAC L EE L GL +
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I C G + KAL+L +M +K V P + L+
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 166/357 (46%), Gaps = 21/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S ++ EP +Y+ VI L + ++S VL + +R + E + LIK Y
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR-GYSLDEVTYNTLIKGY 320
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
F ++ + + M+ G T + ++ S+C+ ++
Sbjct: 321 CKEGNFHQALVMHAE------------------MLRHGLTPSVITYTSLIHSMCKAGNM- 361
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ + F+ +M+ G C YT ++ +K + +A +L +M +G P +V Y
Sbjct: 362 -NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG V A + +++ GL PDV +Y+ ++G C+ +V+ +++ M E G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KPD ITY++L+Q C+ R +L +EM G+ + TY+ +I+ +GD+ +A
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E + KG+ + I GL ++ R+A LL ++ ++ P + L+
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 117/215 (54%), Gaps = 1/215 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVL 270
V++S + + AL I++ ++ G P ++ Y VL+ I + + AE +F E+L
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
+ P+V+TYN+ I G C N++ + + ME G P+V+TYNTL+ CK+R+++
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L++ M KG+ NL +Y+++I+GL +G + E +L E +G ++ I G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C+ G +AL + +M ++P + +L+ S
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 152/325 (46%), Gaps = 6/325 (1%)
Query: 100 SSVLDH-IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILN 158
++VLD I + N E +F +++++ + F + N+ + F N + A+ + +
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVF--TYNILIRGFCFAGN-IDVALTLFD 229
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M G + T + ++ C+ R + D+ ++ M G ++ Y VI L +
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKI--DDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ ++ + +L +M G D V Y ++ G + ++ +A + E+L GL P V T
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y I+ +CK N+ ++ + M G P+ TY TL+ + +N +++EM
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G ++ TY+ +I+G G + +A +LE+ KGL + + G C+ V
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+AL + ++M +K + P + +L+
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLI 492
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 52/262 (19%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI +L M G D + S +LS C D+ DE L +EM + G + Y+++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV--DEALRVKREMVEKGIKPDTITYSSL 491
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ ++ + +A + +M G+ PD YT ++N ++ D KA +L +E++ G+
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 273 VPDVYTYNVYINGLCKQN--------------------------------NVE------- 293
+PDV TY+V INGL KQ+ N+E
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 294 -AGIKMIACMEE--------LGS--KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
G M M E LG KPD YN ++ C+ ++ + L KEM G
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Query: 343 VLNLQTYSIMIDGLASKGDIIE 364
+L+ T ++ L +G + E
Sbjct: 672 LLHTVTVIALVKALHKEGKVNE 693
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 169/374 (45%), Gaps = 34/374 (9%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY------- 126
Y P + ++ V+ L ++ + + + +DH E T ID I TY
Sbjct: 124 YGVAPSLKTHNLVLHGLCKSGK---VLAAMDHFET----TTTNGCTID-IHTYTAIVDWL 175
Query: 127 ADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDG 169
A + QD+V L KI ++ R+ AI++L ++++G D
Sbjct: 176 AKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 235
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T + ++ + +++ S E +EM G V YT +IR L++ K+ A +
Sbjct: 236 VTYTSLIDGLGKEK--RSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M S G PD+V + +++G+ A +F + GL P+ Y+ I+GLCK
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
++ ++M+A M++ PD ITYN L+ LCK ++ R EM G ++ TY
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+I++ G G+ ACG+ ++ + + I GLC+R + KA + M +
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473
Query: 410 KDVSPGARVWEALL 423
+ P + V+ +L+
Sbjct: 474 RGCPPDSFVYSSLV 487
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 156/360 (43%), Gaps = 23/360 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
+L+ + C P Y+ ++ L + + + +L I +N TP+ + + LI
Sbjct: 186 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV--DNGCTPDVVTYTSLID 243
Query: 125 TYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCV 167
R ++ LF ++ + ++ A + M + G
Sbjct: 244 GLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 303
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T S ++ +C+ + + + + M+ G V Y+ +I L K K+ AL
Sbjct: 304 DVVTLSTMIDGLCKAGRIGA--AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 361
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L QMK PD + Y ++++G+ D A FDE+L G PDVYTYN+ ++G C
Sbjct: 362 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFC 421
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K N +A + M P+V+TY TL+ LCK R+L + + MK +G +
Sbjct: 422 KAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSF 481
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
YS ++DGL G + C L +E G+ S I LC+ V +A+ L +
Sbjct: 482 VYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAI 540
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE-LGSKPDVITYNTL 317
+A L L +PDV T+NV I G C E +I MEE G P + T+N +
Sbjct: 77 EAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLV 136
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L LCK ++ + + G +++ TY+ ++D LA I +A L+E+ G
Sbjct: 137 LHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGC 196
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ + GLC+ G + +A++LL+++ D +P + +L+
Sbjct: 197 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 242
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 138/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ +N GF VD KT + +L +CE L +E +E+ GF V Y +
Sbjct: 481 AVELWLKFLNKGFLVDTKTSNALLHGLCEAGKL--EEGFRIQKEILGRGFVMDRVSYNTL 538
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +K+ +A +++M G+KPD Y++++ G++ +A + + + G+
Sbjct: 539 ISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGM 598
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDVYTY+V I+G CK E G K+ M +P+ + YN L+ A C+ L+ E
Sbjct: 599 IPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALE 658
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++MK KGI N TY+ +I G++ + EA LLEE +GL + I G
Sbjct: 659 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYG 718
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + K LL++M K+V P + ++
Sbjct: 719 KLGQMVKVECLLREMHSKNVHPNKITYTVMI 749
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 132/264 (50%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
++ GF +D + + ++S C + L DE F+ EM K G Y+ +IR L+
Sbjct: 523 ILGRGFVMDRVSYNTLISGCCGNKKL--DEAFMFMDEMVKKGLKPDNYTYSILIRGLLNM 580
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
KV +A+ K +G+ PD+ Y+++++G E + ++LFDE++ L P+ Y
Sbjct: 581 NKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVY 640
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N I C+ + +++ M+ G P+ TY +L++ + + + + L++EM+
Sbjct: 641 NHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRM 700
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ N+ Y+ +IDG G +++ LL E +K + + I G + G V +
Sbjct: 701 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 760
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A LL +M +K + P + ++ +
Sbjct: 761 ASRLLHEMREKGIVPDSITYKEFI 784
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 5/281 (1%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGF 202
+F+ + A+++ + N G TC+++L+S+ + E V + G
Sbjct: 193 QFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK----GV 248
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ +T I + K KV +A+ + ++M+ G+ P++V Y V++G+ + Y +A
Sbjct: 249 SPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFM 308
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++++ G+ P + TY++ + GL K + ++ M E G P+VI YN L+ +L
Sbjct: 309 FKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLI 368
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ LN+ E+ M KG+ L TY+ +I G G A LL+E L+ G
Sbjct: 369 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQG 428
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F IC LC + AL + +M +++SPG + L+
Sbjct: 429 SFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLI 469
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 164/392 (41%), Gaps = 58/392 (14%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y ++K L + + D VL + ++ F ++ +LI + +A
Sbjct: 319 EPTLITYSILVKGLTKAKRIGDAYCVLKEMTEK-GFPPNVIVYNNLIDSLIEAGSLNK-- 375
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
AIEI + M++ G + T + ++ C+ E L ++E
Sbjct: 376 ----------------AIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERL--LKE 417
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M +GF +T+VI L AL + +M + P T +++G+
Sbjct: 418 MLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 477
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM------------------ 298
+ KA EL+ + L G + D T N ++GLC+ +E G ++
Sbjct: 478 HSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNT 537
Query: 299 --------------IACMEEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
M+E+ G KPD TY+ L++ L + ++ + + K G
Sbjct: 538 LISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNG 597
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
++ ++ TYS+MIDG E L +E ++ L + +++ I C+ G + AL
Sbjct: 598 MIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMAL 657
Query: 402 ELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
EL + M K +SP + + +L+ +S +S+++
Sbjct: 658 ELREDMKHKGISPNSATYTSLIKGMSIISRVE 689
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 128/296 (43%), Gaps = 24/296 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSL 174
++F I + + ++++ LF K+ + + N V + I DG + G+
Sbjct: 253 YLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVI------DGLGMSGRY--- 303
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
DE F ++M + G ++ Y+ +++ L K +++ DA +L +M
Sbjct: 304 -------------DEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTE 350
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P+++ Y +++ +I KA E+ D ++ GL TYN I G CK +
Sbjct: 351 KGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADI 410
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+++ M +G + ++ +++ LC + V EM + + + +I
Sbjct: 411 AERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLIS 470
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
GL G +A L + LNKG + + + GLC+ G + + + K++ +
Sbjct: 471 GLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGR 526
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 6/268 (2%)
Query: 119 FIDLIKTYADAHR--FQDSVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDGKTCSL 174
++D K AD R F SV F + F R +G AI+IL M G + + +
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L C+++ + D + +++ M G +V Y ++ +L K KV DA+ ILNQ+ S
Sbjct: 385 LLHGFCKEKKM--DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P ++ Y V++G+ KA +L DE+ L PD TY+ + GL ++ V+
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
IK E +G +P+ +T+N+++ LCK R+ +R + + M +G N +Y+I+I+
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSS 382
GLA +G EA LL E NKGL +SS
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 149/281 (53%), Gaps = 4/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L+ M+ D T ++++ + C RD + + EM+ G +V Y +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATC--RDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K+ ++ +A+ LN M S G +P+++ + ++L + ++ AE+L ++L G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V T+N+ IN LC++ + I ++ M + G +P+ ++YN LL CK ++++R E
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ M +G ++ TY+ M+ L G + +A +L + +KG ++ I GL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ G KA++LL +M KD+ P + +L+ LS K+D
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 178/361 (49%), Gaps = 26/361 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
S+L S+ P Y+ ++++L ++ + VLD + +R+ + P+ I + LI+
Sbjct: 193 SVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY--PDVITYTILIE 247
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
R + VG A+++L+ M + G D T +++++ +C++
Sbjct: 248 ATC------------------RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L DE + F+ +M G ++ + ++RS+ + DA +L M G P +V +
Sbjct: 290 L--DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++N + + +A ++ +++ G P+ +YN ++G CK+ ++ I+ + M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD++TYNT+L ALCK ++ E++ ++ KG L TY+ +IDGLA G +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A LL+E K L + + + GL + G V +A++ + + P A + +++L
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 425 S 425
Sbjct: 528 G 528
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 141/280 (50%), Gaps = 5/280 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A +IL + G D T ++++S C+ + E+ + + ++
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK-----AGEINNALSVLDRMSVSPD 203
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++RSL K+ A+ +L++M PD++ YT+++ A +L D
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PDV TYNV +NG+CK+ ++ IK + M G +P+VIT+N +L+++C
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L+ +M KG ++ T++I+I+ L KG + A +LE+ G S ++
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G C+ + +A+E L++M + P + +L +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 166/350 (47%), Gaps = 23/350 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
+C P Y +I+ +S +LD E R+ TP+ + +++
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLD--EMRDRGCTPDVVTYNVL----------- 280
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGF 193
VN K R+ AI+ LN M + G + T ++IL S+C R + +++LL
Sbjct: 281 -VNGICKE-----GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA- 333
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+M + GF +V + +I L +K + A+ IL +M G +P+ + Y +L+G
Sbjct: 334 --DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
++ +A E + ++ G PD+ TYN + LCK VE ++++ + G P +IT
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNT++ L K + + +L+ EM+ K + + TYS ++ GL+ +G + EA E
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + F+ + GLC+ +A++ L M ++ P + L+
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
F V+ N +R +V+ ++ + L M G PDI+ T ++ G KA
Sbjct: 98 FALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
++ + L G VPDV TYNV I+G CK + ++ ++ + PDV+TYNT+L++L
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEIN---NALSVLDRMSVSPDVVTYNTILRSL 214
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C +L + E++ M + ++ TY+I+I+ + A LL+E ++G
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
++ + G+C+ G + +A++ L M P +L S S
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 181/382 (47%), Gaps = 31/382 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKT 125
+ +NCEP ++Y+ ++ L E F V ++ R+ P+ + F +K+
Sbjct: 98 VFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKV--YMRMRDKGIVPDVYTFTIRMKS 155
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT--CSLILSSVCEQR 183
+ R +R A +LN M + G C C++I E
Sbjct: 156 FC------------------RTSRPHAARRLLNNMPSQG-CESSAVAYCTVIGGFYEENH 196
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+ + EL +EM LG C ++ + +I +L +K V ++ +LN++ G+ P++
Sbjct: 197 RVEAHELF---EEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFT 253
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+ + G + +A L D + GL PDV TYN I GLCK V + M
Sbjct: 254 VNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMV 312
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G +PD TYN+++ CK+ + +++++ +KG V + TY +I+GL GDI
Sbjct: 313 NEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDID 372
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE-AL 422
A + EA+ KGL + + + GL Q+GL+ +AL+L+ +M++ SP +W L
Sbjct: 373 RAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSP--DIWTYNL 430
Query: 423 LLSSVSKLDFVNTSFIRLVDQI 444
+++ + K+ V+ + ++D I
Sbjct: 431 VINGLCKIGCVSDADNLVIDAI 452
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 14/292 (4%)
Query: 130 HRFQDSVNLFYKIPKFRINRV--GF--------AIEILNCMINDGFCVDGKT-CSLILSS 178
H + VN Y+ F N + G+ A +IL GF D T CSLI +
Sbjct: 306 HYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLI-NG 364
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C+ D+ D + E + G +V +++ L ++ + AL ++N+M +G
Sbjct: 365 LCQDGDI--DRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCS 422
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PDI Y +V+NG+ A+ L + + G +PDV+T+N I+G CK+ ++ I++
Sbjct: 423 PDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEI 482
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M G PDVITYN++L LCK + + K M KG V N+ TY+I+ +
Sbjct: 483 VDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCK 542
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+ EA L+EE NKGL F + G C G + A +L K++ ++
Sbjct: 543 ARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 131/256 (51%), Gaps = 4/256 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M+N+G+ DG T + I+ C+ + ++D++L ++ GF Y ++I L +
Sbjct: 311 MVNEGYEPDGFTYNSIIDGYCKLGMMQNADQIL---RDGAFKGFVPDESTYCSLINGLCQ 367
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ A+ + N+ G+KP++V ++ G+ Q ++A +L +E+ G PD++T
Sbjct: 368 DGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWT 427
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN+ INGLCK V ++ G PDV T+NTL+ CK +L+ E+V M
Sbjct: 428 YNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMW 487
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G+ ++ TY+ +++GL G + G + + KG ++ C+ V
Sbjct: 488 NHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVE 547
Query: 399 KALELLKQMADKDVSP 414
+AL L+++M +K ++P
Sbjct: 548 EALNLIEEMQNKGLTP 563
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 171/394 (43%), Gaps = 40/394 (10%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET----- 114
+PH LL++ CE AY VI E + +E E FE
Sbjct: 161 RPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENH---------RVEAHELFEEMLGLG 211
Query: 115 --PEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT 171
P+ + F LI T Q+S L K+ K ++ F + I GFC
Sbjct: 212 ICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFI----QGFCQRAML 267
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
I R L+ D ++ Y +I L K KV +A L +
Sbjct: 268 NEAIRLLDGVGRGLTPD-----------------VITYNTLICGLCKNFKVVEAEHYLRK 310
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M ++G +PD Y +++G A+++ + G VPD TY INGLC+ +
Sbjct: 311 MVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGD 370
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
++ I + E G KP+++ NTL++ L + + + +L+ EM G ++ TY++
Sbjct: 371 IDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNL 430
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I+GL G + +A L+ +A+ KG F+ I G C++ + A+E++ +M +
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490
Query: 412 VSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
VSP + ++L L K + V +F ++++
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEK 524
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 130/273 (47%), Gaps = 5/273 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++++N M +G D T +L+++ +C+ +S + L V + G + + +
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNL--VIDAIAKGHLPDVFTFNTL 466
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I KK K+ +A+ I+++M + G+ PD++ Y +LNG+ Y F ++ G
Sbjct: 467 IDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGC 526
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VP++ TYN+ CK VE + +I M+ G PDV+ + TL++ C +L+ +
Sbjct: 527 VPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQ 586
Query: 333 LVKEM--KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L K + ++K + TY+IMI+ A K ++ A L + G S + I G
Sbjct: 587 LFKRVDEQYK-FSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDG 645
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G + L +K + P + +L
Sbjct: 646 FCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVL 678
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 130/315 (41%), Gaps = 61/315 (19%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISS-VLDHIEKRENFETPE-FIFIDLIK 124
L++ S C P Y+ VI L + D + V+D I K P+ F F LI
Sbjct: 412 LMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGH---LPDVFTFNTLID 468
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
Y + + AIEI++ M N G D T + IL+ +C+
Sbjct: 469 GYCKKLKLDN------------------AIEIVDRMWNHGVSPDVITYNSILNGLCKAG- 509
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
++++G + M + G ++ Y + S K KV +AL ++ +M++ G+ PD+V +
Sbjct: 510 -KYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNF 568
Query: 245 TMVLNGVI--------------VQEDYV----------------------KAEELFDELL 268
++ G V E Y AE+LF+++
Sbjct: 569 GTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMC 628
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD YTY V I+G CK N+ +G + E G P + T+ +L LC R ++
Sbjct: 629 ENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVH 688
Query: 329 RLRELVKEMKWKGIV 343
++ M KGIV
Sbjct: 689 EAVGIIHLMVHKGIV 703
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +R+ +K K+ +A+ + +M +P + Y ++N ++ + +A +++ +
Sbjct: 79 YIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMR 138
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+VPDVYT+ + + C+ + A +++ M G + + Y T++ +
Sbjct: 139 DKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRV 198
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL +EM GI ++ ++ +I L KG + E+ LL + L +G+ + I
Sbjct: 199 EAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFI 258
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G CQR ++ +A+ LL + + ++P + L+
Sbjct: 259 QGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLI 292
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 8/208 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTN 211
A+ ++ M N G D ++ C+ DL + +L V E K F + Y
Sbjct: 549 ALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYK--FSHTIATYNI 606
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I + K + A + N+M +G PD Y ++++G + + G
Sbjct: 607 MINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKG 666
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L+P + T+ +N LC + V + +I M G P+V+ NT+ +A +E+ +
Sbjct: 667 LIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV--NTIFEA--DKKEVAAPK 722
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASK 359
+V+ + KG + Y I+ DG+ K
Sbjct: 723 IVVENLMKKGHITYF-AYEILHDGIRDK 749
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ L+ + K G +V Y
Sbjct: 117 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAPLV--FDAITKWGLRPSVVSYN 170
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M++ G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 171 TLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVK 230
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +LN+
Sbjct: 231 GLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQA 290
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 291 HGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISG 350
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P + ++
Sbjct: 351 LCQEGRSXDAEKMLREMLSVGLKPDTGTYTMII 383
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M G D T S++++ +C++ + D+ EM G
Sbjct: 178 RLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXM--DDANELFDEMLVKGLVPN 235
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PDJ+ Y ++ G+ + D +A L D
Sbjct: 236 XVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLID 295
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL PD +TY I+G CK+ +++A + M + + D + Y L+ LC+
Sbjct: 296 EMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEG 355
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ + LL+E G
Sbjct: 356 RSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 406
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y ++ L KK + A G++++M G+KPD YT +++G + D A E
Sbjct: 271 JITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRK 330
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + D Y I+GLC++ KM+ M +G KPD TY ++ CK
Sbjct: 331 RMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKG 390
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ + +L+KEM+ G V + TY+++++G
Sbjct: 391 DVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 142/269 (52%), Gaps = 5/269 (1%)
Query: 167 VDGKTCSL---ILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
VDGK L + ++V + +D ++ EM +V Y+ +IR K
Sbjct: 199 VDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGK 258
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ DA+ + N+M + IKPD+ + ++++G + KA+ + D +++ + P+V T+N
Sbjct: 259 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNT 318
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
++G CK ++ G + A M + G KP+V+TY +L+ C V+++N+ +++ M +G
Sbjct: 319 LVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRG 378
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ N+ +Y+IMI+G + +A L E +K + ++ I GLC+ G + A
Sbjct: 379 VTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAF 438
Query: 402 ELLKQMADKDVSPGARVWEALLLSSVSKL 430
+L+ +M D+ P + ++L + ++KL
Sbjct: 439 QLVNEMHDRGQPPNIITYNSILNALLTKL 467
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 2/279 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F N V A+ + N +++ + + IL S+ + + + +L Q+M+ G
Sbjct: 44 FHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHT--VLSLSQQMEFEGINP 101
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V + +I + + A +L ++ G +PDI+ + G ++ +A
Sbjct: 102 NFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFH 161
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
D+L+ LG D +Y INGLCK A ++++ ++ + + + YNT++ + K
Sbjct: 162 DKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKD 221
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ +N +L EM K I ++ TYS +I G G + +A L + + + + F
Sbjct: 222 KHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTF 281
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G C+ G ++KA +L M +D+ P + L+
Sbjct: 282 NILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLV 320
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 130/297 (43%), Gaps = 4/297 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + FA +L ++ G+ D T + + C + + + L F ++ LGF
Sbjct: 115 QLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIH--QALNFHDKLVALGFHLD 172
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I L K + AL +L ++ ++ + V Y V++G+ + A +L+
Sbjct: 173 QVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYS 232
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ + PDV TY+ I G ++ I + M KPDV T+N L+ CK
Sbjct: 233 EMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEG 292
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + + ++ M + I N+ T++ ++DG + E + + +G+ +
Sbjct: 293 RLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYC 352
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
+ G C V KA ++ M+ + V+ + ++ + K+D FI +
Sbjct: 353 SLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEM 409
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 133 QDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELL 191
D ++LF K+ + + V +A E+ I+ T +++++ +C++ L + E +
Sbjct: 196 NDMLSLFLKLNRMEMAWVLYA-EMFRLRISSTV----YTFNIMVNVLCKEGKLKKAREFI 250
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
GF M+ LGF +V Y +I + + A IL+ M+ GI+PD Y +++G+
Sbjct: 251 GF---MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGM 307
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ +A LFD+++ +GLVP+ TYN I+G C + ++E M + G P V
Sbjct: 308 CKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSV 367
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
TYN L+ AL + +++KEM+ KGI+ + TY+I+I+G + G+ +A L E
Sbjct: 368 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 427
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+KG+ + I L +R +++A +L +++ D+ VSP ++ A++
Sbjct: 428 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 479
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 173/369 (46%), Gaps = 30/369 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P +Y+ +I + +LD + + + E + + LI R +++
Sbjct: 259 KPNVVSYNTIIHGYSSRGNIEGARRILDAM-RVKGIEPDSYTYGSLISGMCKEGRLEEAS 317
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDG---------------------KTCSLI 175
LF K+ I V A+ N +I DG+C G T +L+
Sbjct: 318 GLFDKM--VEIGLVPNAV-TYNTLI-DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 373
Query: 176 LSSV-CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+ ++ E R +D++ ++EM+K G + Y +I + A + N+M S
Sbjct: 374 VHALFMEGRMGEADDM---IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS 430
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
GI+P V YT ++ + + +A++LF+++L G+ PDV +N ++G C NVE
Sbjct: 431 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVER 490
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ M+ PD +T+NTL+Q C+ ++ R L+ EMK +GI + +Y+ +I
Sbjct: 491 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLIS 550
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G +GDI +A + +E L+ G ++ I LC+ A ELLK+M +K +SP
Sbjct: 551 GYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISP 610
Query: 415 GARVWEALL 423
+ +L+
Sbjct: 611 DDSTYLSLI 619
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 141/294 (47%), Gaps = 4/294 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A IL+ M G D T ++S +C++ L +E G +M ++G V Y +
Sbjct: 281 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL--EEASGLFDKMVEIGLVPNAVTYNTL 338
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K + A ++M GI P + Y ++++ + ++ +A+++ E+ G+
Sbjct: 339 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 398
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD TYN+ ING + N + + M G +P +TY +L+ L + + +
Sbjct: 399 IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 458
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +++ +G+ ++ ++ M+DG + G++ A LL+E K + F+ + G C
Sbjct: 459 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 518
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ G V +A LL +M + + P + L+S + + +F R+ D++L+
Sbjct: 519 REGKVEEARMLLDEMKRRGIKPDHISYNT-LISGYGRRGDIKDAF-RVRDEMLS 570
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 2/250 (0%)
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
L++ CE R +DE MK+ G + +++ +K ++ A + +M
Sbjct: 162 LLVRVCCELR--RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
I + + +++N + + KA E + LG P+V +YN I+G + N+E
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++ M G +PD TY +L+ +CK L L +M G+V N TY+ +I
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 339
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DG +KGD+ A +E + KG+ S ++ + L G + +A +++K+M K +
Sbjct: 340 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 399
Query: 414 PGARVWEALL 423
P A + L+
Sbjct: 400 PDAITYNILI 409
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F R+G A +++ M G D T +++++ R ++ + EM G
Sbjct: 378 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY--SRCGNAKKAFDLHNEMLSKGIEP 435
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V YT++I L ++ ++ +A + ++ G+ PD++ + +++G + +A L
Sbjct: 436 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 495
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PD T+N + G C++ VE ++ M+ G KPD I+YNTL+ +
Sbjct: 496 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 555
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS--KGDIIEACGLLEEALNKGLCTQSS 382
++ + EM G L TY+ +I L +GD+ E LL+E +NKG+ S
Sbjct: 556 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE--LLKEMVNKGISPDDS 613
Query: 383 MFDETICGL 391
+ I G+
Sbjct: 614 TYLSLIEGM 622
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L +M + PD V + ++ G + +A L DE+ G+ PD +YN I+
Sbjct: 491 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLIS 550
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G ++ +++ ++ M +G P ++TYN L++ LCK +E + EL+KEM KGI
Sbjct: 551 GYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISP 610
Query: 345 NLQTYSIMIDGLASKGDIIE 364
+ TY +I+G+ + ++E
Sbjct: 611 DDSTYLSLIEGMGNVDTLVE 630
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 259 KAEELFDELLVL---GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+A+E F ++ G+VP + T N ++ K N +E + A M L V T+N
Sbjct: 172 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 231
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++ LCK +L + RE + M+ G N+ +Y+ +I G +S+G+I A +L+ K
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
G+ S + I G+C+ G + +A L +M + + P A + L+ +K D
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 110 ENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG 169
+ E + LI + +R +++ +LF KI V + + N M+ DG C +G
Sbjct: 431 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD---QGVSPDVIMFNAMV-DGHCANG 486
Query: 170 KT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
+ +L +++ + DE V + +++ ++ KV +A +
Sbjct: 487 NVERAFMLLKEMDRKSVPPDE-----------------VTFNTLMQGRCREGKVEEARML 529
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L++MK GIKPD + Y +++G + D A + DE+L +G P + TYN I LCK
Sbjct: 530 LDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCK 589
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ +++ M G PD TY +L++ + V L
Sbjct: 590 NQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 628
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 174/352 (49%), Gaps = 23/352 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
N P Y+ +++TL ++ + VLD ++E + P+ I + LI+
Sbjct: 211 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECY--PDVITYTILIEATC------ 262
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+ + VG A+++L+ M N G D T +++++ +C++ L DE + F
Sbjct: 263 ------------KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL--DEAIKF 308
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ M G ++ + ++RS+ + DA +L+ M G P +V + +++N +
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 368
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
Q +A ++ +++ + G P+ +YN ++G CK+ ++ I+ + M G PD++T
Sbjct: 369 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNTLL ALCK +++ E++ ++ KG L TY+ +IDGL+ G A LL+E
Sbjct: 429 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 488
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
KGL + + GL + G V +A++ + + P A + +++L
Sbjct: 489 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 158/316 (50%), Gaps = 21/316 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ Y C+P ++ +++++ ++ D +L + ++ +P + +++
Sbjct: 308 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC--SPSVVTFNIL--- 362
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+N R +G AI+IL M G + + + +L C+++ +
Sbjct: 363 ---------INFL-----CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM- 407
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + ++ M G +V Y ++ +L K KV A+ ILNQ+ S G P ++ Y
Sbjct: 408 -DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ +A +L DE+ GL PD+ TY+ ++GL ++ V+ IK +E LG
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P+ ITYN+++ LCK R+ +R + + M K TY+I+I+G+A +G EA
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 586
Query: 367 GLLEEALNKGLCTQSS 382
LL E ++GL +SS
Sbjct: 587 DLLNELCSRGLVKKSS 602
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI + A ++ + G D T ++++S C+ S E+ +Q + ++
Sbjct: 161 RIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK-----SGEIDNALQVLDRMNVAPD 215
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++R+L K+ A+ +L++ PD++ YT+++ + +A +L D
Sbjct: 216 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 275
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PDV TYNV ING+CK+ ++ IK + M G +P+VIT+N +L+++C
Sbjct: 276 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 335
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L+ +M KG ++ T++I+I+ L +G + A +LE+ G S ++
Sbjct: 336 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 395
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G C+ + +A+E L M + P + LL +
Sbjct: 396 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 435
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 141/277 (50%), Gaps = 4/277 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGM 206
R+ AI+ LN M + G + T ++IL S+C R + +++LL +M + G +
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL---SDMLRKGCSPSV 356
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V + +I L ++ + A+ IL +M G P+ + Y +L+G ++ +A E D
Sbjct: 357 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 416
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G PD+ TYN + LCK V+ ++++ + G P +ITYNT++ L KV +
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
R +L+ EM+ KG+ ++ TYS ++ GL+ +G + EA + G+ + ++
Sbjct: 477 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 536
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ +A++ L M K P + L+
Sbjct: 537 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 573
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 5/239 (2%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
N +R LV+ ++ D L M G PDI+ T ++ G KA + + L
Sbjct: 119 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 178
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G VPDV TYNV I+G CK ++ +++ ++ + PDV+TYNT+L+ LC +L +
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQA 235
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
E++ K ++ TY+I+I+ + + +A LL+E NKG ++ I G
Sbjct: 236 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 295
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+C+ G + +A++ L M P +L S S +++ +L+ +L C
Sbjct: 296 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE--KLLSDMLRKGC 352
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 154/354 (43%), Gaps = 24/354 (6%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQD 134
C P Y +I+ + S +LD E R P+ + + LI R +
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLD--EMRNKGSKPDVVTYNVLINGICKEGRLDE 304
Query: 135 SVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDG---------KTCS-------LIL 176
++ +P + + N + I IL M + G +D K CS +++
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNI-ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 363
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C Q L + +++M G + Y ++ K++K+ A+ L+ M S G
Sbjct: 364 NFLCRQGLLG--RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 421
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
PDIV Y +L + A E+ ++L G P + TYN I+GL K E I
Sbjct: 422 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 481
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K++ M G KPD+ITY++L+ L + +++ + +++ GI N TY+ ++ GL
Sbjct: 482 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 541
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
A L ++K + + I G+ GL ++AL+LL ++ +
Sbjct: 542 CKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 595
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
++ L + +E G K + M G PD+I +L++ C++ + + +++ ++ G
Sbjct: 120 HLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSG 179
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
V ++ TY+++I G G+I A +L+ + ++ + LC G +++A+
Sbjct: 180 AVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAM 236
Query: 402 ELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
E+L + K+ P + +L+ + K V + ++L+D++ N K
Sbjct: 237 EVLDRQLQKECYPDVITY-TILIEATCKESGVGQA-MKLLDEMRNKGSK 283
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 119/236 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ L + ++MK G V YT +I + + +AL + ++M G D+V Y +
Sbjct: 515 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTI 574
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG+ ++ +A+ELF E+ G+ PD YT+ ING K N+ + + M +
Sbjct: 575 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL 634
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPDV+TYNTL+ CK E+ ++ EL +M + I N +Y I+I+G + G + EA
Sbjct: 635 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 694
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E + KG + + G C+ G KA E L M K + P + L+
Sbjct: 695 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 750
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 160/324 (49%), Gaps = 19/324 (5%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNC 159
+F L++TY A + ++ F + ++ V A EI
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
++ G V+ T +++++++C+ + + + + F+ +M++ G +V Y +I + ++
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTK--SFLSDMEEKGVFPDVVTYNTLINAYCRQ 406
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A +++ M G+KP + Y ++NG+ Y++A+ + DE+L +G+ PD TY
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 466
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ + C+ +N+ ++ M G PD+++++ L+ L K L++ + ++MK
Sbjct: 467 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ + Y+I+I G G + EA + +E L +G ++ + GLC+ ++ +
Sbjct: 527 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSE 586
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A EL +M ++ V P + L+
Sbjct: 587 ADELFTEMTERGVFPDFYTFTTLI 610
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 140/278 (50%), Gaps = 4/278 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A+++ + M+ G +D T + IL+ +C+++ LS +DEL EM + G +T
Sbjct: 552 ALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELF---TEMTERGVFPDFYTFTT 608
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K + A+ + M +KPD+V Y +++G + K EL+++++
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 668
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ +Y + ING C V ++ M E G + +IT NT+++ C+ +
Sbjct: 669 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 728
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E + M KGIV + TY+ +I+G + ++ A L+ + N GL ++ + G
Sbjct: 729 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 788
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++G +++A ++ +M ++ V+P + +L+ V++
Sbjct: 789 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQ 826
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 141/325 (43%), Gaps = 39/325 (12%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
L+ M G D T + ++++ C Q L +E + M G + Y +I
Sbjct: 380 FLSDMEEKGVFPDVVTYNTLINAYCRQGLL--EEAFELMDSMSGKGLKPCVFTYNAIING 437
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K K A G+L++M G+ PD Y ++L ++ + AE +FDE+ G+VPD
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 497
Query: 276 VYT-----------------------------------YNVYINGLCKQNNVEAGIKMIA 300
+ + Y + I G C+ + +K+
Sbjct: 498 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 557
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M E G DV+TYNT+L LCK + L+ EL EM +G+ + T++ +I+G G
Sbjct: 558 EMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDG 617
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
++ +A L E + + L ++ I G C+ + K EL M + + P +
Sbjct: 618 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN-HISY 676
Query: 421 ALLLSSVSKLDFVNTSFIRLVDQIL 445
+L++ + V+ +F RL D+++
Sbjct: 677 GILINGYCNMGCVSEAF-RLWDEMV 700
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 86/171 (50%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y +I V +A + ++M G + I+ ++ G + VKA+E
Sbjct: 674 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 733
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L+ G+VPD TYN ING K+ N++ ++ ME G PDVITYN +L +
Sbjct: 734 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 793
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ ++ +M +G+ + TY+ +I+G ++ ++ EA + +E L +G
Sbjct: 794 MQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 844
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD-LSSDELLGFVQEMKKLGFCFGMVD 208
V A + + M+ GF TC+ I+ C + + +DE F+ M G +
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE---FLSNMLLKGIVPDGIT 745
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I +K+E + A ++N+M++ G+ PD++ Y ++LNG Q +AE + +++
Sbjct: 746 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 805
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
G+ PD TY ING QNN++ ++ M + G PD
Sbjct: 806 ERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 115/284 (40%), Gaps = 30/284 (10%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFY 140
Y+ ++ L + + + + +R F P+F F LI Y +V LF
Sbjct: 570 TYNTILNGLCKEKMLSEADELFTEMTERGVF--PDFYTFTTLINGYXKDGNMNKAVTLFE 627
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCSLILSSV 179
+ + + + N +I DGFC + + ++++
Sbjct: 628 MMIQRNLKP---DVVTYNTLI-DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 683
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C +S E EM + GF ++ +++ + A L+ M GI P
Sbjct: 684 CNMGCVS--EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 741
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D + Y ++NG I +E+ +A L +++ GL+PDV TYNV +NG +Q ++ ++
Sbjct: 742 DGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIM 801
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
M E G PD TY +L+ L + EM +G V
Sbjct: 802 LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 845
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQM--KSDGIKPDIV---------CYTMVLNG 250
F + ++ +I LV+ ++ DA ++ +M KS + +IV C + L
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291
Query: 251 VIVQEDYVKAEEL------FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ YV+A +L F L GL + N + GL K V+ ++ +
Sbjct: 292 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 351
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G + +V T N ++ ALCK +++ + + +M+ KG+ ++ TY+ +I+ +G + E
Sbjct: 352 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 411
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A L++ KGL ++ I GLC+ G +A +L +M +SP + LL+
Sbjct: 412 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLV 471
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 168/383 (43%), Gaps = 56/383 (14%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P A Y+ VI + V+ + +R ++ + LI + R +D+
Sbjct: 143 PRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDA 202
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
V +F ++ V + + N +I G+C GK D L + +
Sbjct: 203 VKVFDEM--LTKGEVAPSAVMYNALIG-GYCDVGKL----------------DVALQYRE 243
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M + G + Y ++ +L + DA +L +M+ +G PD+ Y +++NG +
Sbjct: 244 DMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEG 303
Query: 256 DYVKAEELFDEL-----------------------------------LVLGLVPDVYTYN 280
+ KA E+F+E+ + G+ PDV YN
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYN 363
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
IN C ++E +++A ME+ PD +TYNTL++ C + L+ R L+ EM +
Sbjct: 364 ALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKR 423
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
GI +L +Y+ +I G + KGDI +A + +E ++KG ++ I GLC+ A
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDA 483
Query: 401 LELLKQMADKDVSPGARVWEALL 423
L+K+M K ++P + +L+
Sbjct: 484 ENLMKEMVAKGITPDDSTYISLI 506
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F R A +L M +GF D T +++++ C++ + + L +EM + G
Sbjct: 265 FMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN--EKKALEVFEEMSQKGVRA 322
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V YT++I +K +V + + N GI+PD+V Y ++N D +A E+
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PD TYN + G C ++ +I M + G +PD+++YNTL+
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMK 442
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS--KGDIIEACGLLEEALNKGLCTQSS 382
++ + EM KG L TY+ +I GL +GD +A L++E + KG+ S
Sbjct: 443 GDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGD--DAENLMKEMVAKGITPDDS 500
Query: 383 MFDETICGL 391
+ I GL
Sbjct: 501 TYISLIEGL 509
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EI+ M D T + ++ C L DE + EM K G +V Y +
Sbjct: 378 AYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRL--DEARTLIDEMTKRGIQPDLVSYNTL 435
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV--IVQEDYVKAEELFDELLVL 270
I K + DAL + ++M G P ++ Y ++ G+ I Q D AE L E++
Sbjct: 436 ISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGD--DAENLMKEMVAK 493
Query: 271 GLVPDVYTYNVYINGLCKQN 290
G+ PD TY I GL ++
Sbjct: 494 GITPDDSTYISLIEGLTTED 513
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+N +L+ LC + R EL+++M N TY+ +I G ++G + A ++ E
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPRP----NAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 373 LNK-GLCTQSSMFDETICGLCQRGLVRKALELLKQMADK-DVSPGARVWEALL--LSSVS 428
+ G+ + I G C+ G + A+++ +M K +V+P A ++ AL+ V
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233
Query: 429 KLD 431
KLD
Sbjct: 234 KLD 236
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 156/292 (53%), Gaps = 9/292 (3%)
Query: 133 QDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELL 191
D ++LF K+ + + V +A E+ I+ T +++++ +C++ L + E +
Sbjct: 218 NDMLSLFLKLNRMEMAWVLYA-EMFRLRISSTV----YTFNIMVNVLCKEGKLKKAREFI 272
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
GF M+ LGF +V Y +I + + A IL+ M+ GI+PD Y +++G+
Sbjct: 273 GF---MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGM 329
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ +A LFD+++ +GLVP+ TYN I+G C + ++E M + G P V
Sbjct: 330 CKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSV 389
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
TYN L+ AL + +++KEM+ KGI+ + TY+I+I+G + G+ +A L E
Sbjct: 390 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 449
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+KG+ + I L +R +++A +L +++ D+ VSP ++ A++
Sbjct: 450 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 501
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 173/369 (46%), Gaps = 30/369 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P +Y+ +I + +LD + + + E + + LI R +++
Sbjct: 281 KPNVVSYNTIIHGYSSRGNIEGARRILDAM-RVKGIEPDSYTYGSLISGMCKEGRLEEAS 339
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDG---------------------KTCSLI 175
LF K+ I V A+ N +I DG+C G T +L+
Sbjct: 340 GLFDKM--VEIGLVPNAV-TYNTLI-DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 395
Query: 176 LSSV-CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+ ++ E R +D++ ++EM+K G + Y +I + A + N+M S
Sbjct: 396 VHALFMEGRMGEADDM---IKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS 452
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
GI+P V YT ++ + + +A++LF+++L G+ PDV +N ++G C NVE
Sbjct: 453 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVER 512
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ M+ PD +T+NTL+Q C+ ++ R L+ EMK +GI + +Y+ +I
Sbjct: 513 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLIS 572
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G +GDI +A + +E L+ G ++ I LC+ A ELLK+M +K +SP
Sbjct: 573 GYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISP 632
Query: 415 GARVWEALL 423
+ +L+
Sbjct: 633 DDSTYLSLI 641
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 141/294 (47%), Gaps = 4/294 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A IL+ M G D T ++S +C++ L +E G +M ++G V Y +
Sbjct: 303 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL--EEASGLFDKMVEIGLVPNAVTYNTL 360
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K + A ++M GI P + Y ++++ + ++ +A+++ E+ G+
Sbjct: 361 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 420
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD TYN+ ING + N + + M G +P +TY +L+ L + + +
Sbjct: 421 IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 480
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +++ +G+ ++ ++ M+DG + G++ A LL+E K + F+ + G C
Sbjct: 481 LFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 540
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ G V +A LL +M + + P + L+S + + +F R+ D++L+
Sbjct: 541 REGKVEEARMLLDEMKRRGIKPDHISYNT-LISGYGRRGDIKDAF-RVRDEMLS 592
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 2/250 (0%)
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
L++ CE R +DE MK+ G + +++ +K ++ A + +M
Sbjct: 184 LLVRVCCELR--RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
I + + +++N + + KA E + LG P+V +YN I+G + N+E
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++ M G +PD TY +L+ +CK L L +M G+V N TY+ +I
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 361
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DG +KGD+ A +E + KG+ S ++ + L G + +A +++K+M K +
Sbjct: 362 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 421
Query: 414 PGARVWEALL 423
P A + L+
Sbjct: 422 PDAITYNILI 431
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F R+G A +++ M G D T +++++ R ++ + EM G
Sbjct: 400 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY--SRCGNAKKAFDLHNEMLSKGIEP 457
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V YT++I L ++ ++ +A + ++ G+ PD++ + +++G + +A L
Sbjct: 458 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLL 517
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PD T+N + G C++ VE ++ M+ G KPD I+YNTL+ +
Sbjct: 518 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRR 577
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS--KGDIIEACGLLEEALNKGLCTQSS 382
++ + EM G L TY+ +I L +GD+ E LL+E +NKG+ S
Sbjct: 578 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE--LLKEMVNKGISPDDS 635
Query: 383 MFDETICGL 391
+ I G+
Sbjct: 636 TYLSLIEGM 644
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L +M + PD V + ++ G + +A L DE+ G+ PD +YN I+
Sbjct: 513 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLIS 572
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G ++ +++ ++ M +G P ++TYN L++ LCK +E + EL+KEM KGI
Sbjct: 573 GYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISP 632
Query: 345 NLQTYSIMIDGLASKGDIIE 364
+ TY +I+G+ + ++E
Sbjct: 633 DDSTYLSLIEGMGNVDTLVE 652
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 259 KAEELFDELLVL---GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+A+E F ++ G+VP + T N ++ K N +E + A M L V T+N
Sbjct: 194 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 253
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++ LCK +L + RE + M+ G N+ +Y+ +I G +S+G+I A +L+ K
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
G+ S + I G+C+ G + +A L +M + + P A + L+ +K D
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 370
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 110 ENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG 169
+ E + LI + +R +++ +LF KI V + + N M+ DG C +G
Sbjct: 453 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD---QGVSPDVIMFNAMV-DGHCANG 508
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+ ++EM + V + +++ ++ KV +A +L
Sbjct: 509 NV----------------ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 552
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
++MK GIKPD + Y +++G + D A + DE+L +G P + TYN I LCK
Sbjct: 553 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ +++ M G PD TY +L++ + V L
Sbjct: 613 QEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 650
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 157/333 (47%), Gaps = 20/333 (6%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+ YH +I L+ F + S+L ++ E +FI +I++Y A R + ++ F
Sbjct: 87 DTYHAIIYRLSRARAFEPVESLLLELQD-SGINCSEDLFITVIRSYGLASRPKMALKTFL 145
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+I F + R ++ LN ++N ++ + SS LL F K
Sbjct: 146 RIQTFGVRR---SVRSLNTLLN---------------ALVQNNRFSSVHLL-FKYSKSKF 186
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G + +I++L KK V A + ++M S GI P++V YT +L G + + D + A
Sbjct: 187 GVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGA 246
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ +F EL G +PD TY + ++G KQ +K++ MEE G +P+ ITY ++
Sbjct: 247 KRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILG 306
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
CK R+ L+ +M K + N +ID L +G + EAC + E+ L K
Sbjct: 307 YCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPD 366
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+++ I LC+ G + +A +L + +S
Sbjct: 367 NAITSTLIHWLCKEGNIWEARKLFNEFERGTIS 399
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD-EL 267
+ VIRS + AL ++++ G++ + +LN ++ + LF
Sbjct: 124 FITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSK 183
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+VP+V+T N+ I LCK+N+VE K+ M +G P+V+TY T+L ++
Sbjct: 184 SKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDM 243
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + E+ G + + TY+I++DG +G +A +++E G+ +
Sbjct: 244 IGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVI 303
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGA 416
I G C+ +AL LL M +K P +
Sbjct: 304 ILGYCKERKSGEALNLLNDMLEKKYIPNS 332
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L + +L +++ GI + V+ + A + F +
Sbjct: 89 YHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQ 148
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMI--ACMEELGSKPDVITYNTLLQALCKVRE 326
G+ V + N +N L QNN + + ++ + G P+V T N L++ALCK +
Sbjct: 149 TFGVRRSVRSLNTLLNALV-QNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKND 207
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ R++ EM GIV N+ TY+ ++ G S+GD+I A + E + G ++ +
Sbjct: 208 VEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTI 267
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G ++G A++++ +M + V P + ++L
Sbjct: 268 LMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILG 306
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 3/224 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++++ M +G + T +I+ C++R S E L + +M + + V
Sbjct: 281 AVKVMDEMEENGVEPNDITYGVIILGYCKER--KSGEALNLLNDMLEKKYIPNSALCCKV 338
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + +V +A + ++ PD + +++ + + + +A +LF+E G
Sbjct: 339 IDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEF-ERGT 397
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ + TYN I G+C+ + ++ M E G P+ TYN L++ KV + + +
Sbjct: 398 ISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIK 457
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+V+EM KG +LN TY I+++GL G E +L ++ G
Sbjct: 458 VVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSG 501
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 158/313 (50%), Gaps = 9/313 (2%)
Query: 113 ETPEFIFIDLIKT--YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK 170
E F++ +I D F VN K F G A+E++N M G +
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLF-----GSALELVNDMDAKGCKPNLN 418
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ C++ L L+ ++EM GF V Y +I +L K K+ +AL +
Sbjct: 419 TYTILIDGFCKKGQLEEAGLI--LREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFG 476
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M S G KPDI + ++ G+ ++ A L+ ++++ G++ + T+N I+ ++
Sbjct: 477 EMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRG 536
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ +K++ M G D ITYN L++ALCK + + L +EM KG+ ++ T +
Sbjct: 537 EIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCN 596
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+I+G + G + A + + +++G ++ I GLC+RG +++AL L +++ +
Sbjct: 597 ILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAE 656
Query: 411 DVSPGARVWEALL 423
+ P + + L+
Sbjct: 657 GIQPDSITYNTLI 669
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 177/407 (43%), Gaps = 62/407 (15%)
Query: 69 HSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYAD 128
HSFS+Y + +I L + F I +L + K E E +FI ++K Y
Sbjct: 102 HSFSVY---------YLLIDKLGAAAGFKVIDRLLLQM-KEEGIVFRESLFILIMKYYGR 151
Query: 129 AHRFQDSVNLFYKI-------PKFRINRVGFAIEIL-NC----------MINDGFCVDGK 170
A + L + P FR V + ++ NC M++ G +
Sbjct: 152 AGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDY 211
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T L++ ++C ++ + LL +++M K G + Y +I +L K+++V +AL +L
Sbjct: 212 TFGLVMKALCMVNEVDNACLL--LRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLE 269
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M G PD+ + V+ G ++ +L D +++ G P+ TY ++GLCK
Sbjct: 270 EMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTC 329
Query: 291 NVEAGIKMIA--------------------------------CMEELGSKPDVITYNTLL 318
++ +++ M G PDV T++TL+
Sbjct: 330 RIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLV 389
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCK ELV +M KG NL TY+I+IDG KG + EA +L E L KG
Sbjct: 390 NGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFS 449
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ ++ I LC+ G + +AL++ +M+ K P + +L+
Sbjct: 450 LNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFG 496
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI G TC+++++ C + + L F+++M GF +V Y ++I L K+
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNA--LEFMRDMIHRGFSPDIVTYNSLINGLCKR 640
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ +AL + +++++GI+PD + Y ++ + + + A L + G VP+ T+
Sbjct: 641 GRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTW 700
Query: 280 NVYINGLCKQNNVEA 294
N+ + KQ+N E
Sbjct: 701 NILVYNFGKQSNSEG 715
>gi|222631053|gb|EEE63185.1| hypothetical protein OsJ_17994 [Oryza sativa Japonica Group]
Length = 787
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 135/258 (52%), Gaps = 6/258 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +R A ++L CM + D +C +LSS+C+ S+ + + F+ +M G
Sbjct: 214 QAHRPTAAADLLCCMPSLLLDPDPASCRAVLSSLCQY--ASAQDAVAFLDKMCHWGISPS 271
Query: 206 MVDYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
DY V +L+++ KV +A ++ N+M S+G+ P + + +++ ++ EE F
Sbjct: 272 RSDYHAVFDALLQEGKVAEAYEVMKNKMGSNGVAPALAYFKLIMQAFSETPEFDSVEEGF 331
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L+ GLVPDV YNVYI+ LC++ ++ +M+ CME G PD+ T+ ++
Sbjct: 332 DEMLLRGLVPDVDVYNVYISALCRKGDLAGARRMMTCMEHAGCPPDIRTFGVVVSGCMSA 391
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ +RELV+E +G+ + S +I + G +A LL E L + +
Sbjct: 392 GDMGTVRELVQEAIRRGLRWDPTALSELIGLRQAGGGATQAHELLLEPL---FVHDALVL 448
Query: 385 DETICGLCQRGLVRKALE 402
+ I LC++GL+ A +
Sbjct: 449 GQLIGALCKQGLLGPAAQ 466
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/202 (17%), Positives = 73/202 (36%), Gaps = 36/202 (17%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L + P+ ++++ + LC+ + A ++ CM L PD + +L +LC+
Sbjct: 193 LAAPSVSPNATSFHILTSTLCQAHRPTAAADLLCCMPSLLLDPDPASCRAVLSSLCQYAS 252
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL----------------- 369
+ +M GI + Y + D L +G + EA ++
Sbjct: 253 AQDAVAFLDKMCHWGISPSRSDYHAVFDALLQEGKVAEAYEVMKNKMGSNGVAPALAYFK 312
Query: 370 -------------------EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+E L +GL +++ I LC++G + A ++ M
Sbjct: 313 LIMQAFSETPEFDSVEEGFDEMLLRGLVPDVDVYNVYISALCRKGDLAGARRMMTCMEHA 372
Query: 411 DVSPGARVWEALLLSSVSKLDF 432
P R + ++ +S D
Sbjct: 373 GCPPDIRTFGVVVSGCMSAGDM 394
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 137/275 (49%), Gaps = 6/275 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE--LLGFVQEMKKLGFCFG 205
NRV A EI + + G D T + ++ +C LSS+ + +EMK G
Sbjct: 392 NRVDEATEIARLLTSKGILPDVCTFNSLIQGLC----LSSNHKSAMDLFEEMKGKGCRPD 447
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I SL K+ +AL +L +M+ +G ++V Y +++G + +AEE+FD
Sbjct: 448 EFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFD 507
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + G+ D TYN I+GLCK VE +++ M G +PD TYN+LL CK
Sbjct: 508 EMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTG 567
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + ++V+ M G ++ TY+ +I GL G + A LL KG+ ++
Sbjct: 568 DIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYN 627
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
I L +R +A+ L ++M DK P A ++
Sbjct: 628 PVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYK 662
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 149/291 (51%), Gaps = 3/291 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I A+E+++ M+ G D T + ++S +C+ ++ +E + + +M
Sbjct: 320 KIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEI--EEAVKILDQMVSRDCSPN 377
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I SL K+ +V +A I + S GI PD+ + ++ G+ + ++ A +LF+
Sbjct: 378 AVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFE 437
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PD +TYN+ I+ LC +E + ++ ME G +V+ YNTL+ CK +
Sbjct: 438 EMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNK 497
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ E+ EM+ +G+ + TY+ +IDGL + +A L+++ + +GL ++
Sbjct: 498 RIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYN 557
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ C+ G ++KA ++++ M +P + A L+S + K V +
Sbjct: 558 SLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTY-ATLISGLCKAGRVQVA 607
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 167/367 (45%), Gaps = 20/367 (5%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y +P Y+ ++ L + ++ + S + +R F LIK AH+ +
Sbjct: 162 YRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR-IRHDVSTFNILIKALCKAHQVR 220
Query: 134 DSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLIL 176
++ + ++P + ++ + A+ I M+ G T ++++
Sbjct: 221 PAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLI 280
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ C+Q + D+ L F+QE GF Y ++ L K A+ +++ M G
Sbjct: 281 NGFCKQGRI--DQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG 338
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ PDI Y +++G+ + +A ++ D+++ P+ TYN I+ LCK+N V+
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ + G PDV T+N+L+Q LC +L +EMK KG + TY+++ID L
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
S + EA LL+E G +++ I G C+ + +A E+ +M + VS +
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDS 518
Query: 417 RVWEALL 423
+ L+
Sbjct: 519 VTYNTLI 525
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 145/294 (49%), Gaps = 5/294 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ M G D T ++++ S+C R L +E L ++EM+ G +V Y +
Sbjct: 432 AMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL--EEALNLLKEMELNGCARNVVIYNTL 489
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K +++ +A I ++M+ G+ D V Y +++G+ + A +L D++++ GL
Sbjct: 490 IDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGL 549
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD +TYN + CK +++ ++ M G PD++TY TL+ LCK +
Sbjct: 550 RPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASR 609
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L++ ++ KG+VL Y+ +I L + EA L E L+K + + GLC
Sbjct: 610 LLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLC 669
Query: 393 Q-RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
G + +A++ +M ++ P + +L + L +T ++LVD I+
Sbjct: 670 NGGGPIGEAVDFTVEMIERGNIPEFSSF-VMLAEGLCTLSMDDT-LVKLVDMIM 721
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 163/377 (43%), Gaps = 23/377 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
N P Y +++ L + F + VL+ + K E IF+ +++Y + +
Sbjct: 92 NFVPSSSVYEEILRKLGKAGSFEYMRRVLEEM-KLSGCEFDRGIFLIFVESYGKFELYDE 150
Query: 135 SVNLF------YKI-PKFRI-----------NRVGFAIEILNCMINDGFCVDGKTCSLIL 176
V + Y+I P R N++ + M+ D T ++++
Sbjct: 151 VVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILI 210
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
++C+ + L+ ++EM G +T +++ ++ + AL I QM G
Sbjct: 211 KALCKAHQVRPAILM--MEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
V +++NG Q +A E + G PD +TYN +NGLCK + + +
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G PD+ TYN+L+ LCK+ E+ +++ +M + N TY+ +I L
Sbjct: 329 EVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSL 388
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ + EA + +KG+ F+ I GLC + A++L ++M K P
Sbjct: 389 CKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDE 448
Query: 417 RVWEALL--LSSVSKLD 431
+ L+ L S KL+
Sbjct: 449 FTYNMLIDSLCSSRKLE 465
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 23/253 (9%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+LL + C Y+ +I +N + + + D +E + + LI
Sbjct: 469 NLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME-LQGVSRDSVTYNTLIDG 527
Query: 126 YADAHRFQDSVNLFYKI-------PKFRINR----------VGFAIEILNCMINDGFCVD 168
+ R +D+ L ++ KF N + A +I+ M + G D
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPD 587
Query: 169 GKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
T + ++S +C+ R + LL +Q MK G Y VI++L K+ + +A+
Sbjct: 588 IVTYATLISGLCKAGRVQVASRLLRSIQ-MK--GMVLTPHAYNPVIQALFKRNRTHEAMR 644
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV-KAEELFDELLVLGLVPDVYTYNVYINGL 286
+ +M PD + Y +V G+ + +A + E++ G +P+ ++ + GL
Sbjct: 645 LFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGL 704
Query: 287 CKQNNVEAGIKMI 299
C + + +K++
Sbjct: 705 CTLSMDDTLVKLV 717
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 140/268 (52%), Gaps = 6/268 (2%)
Query: 119 FIDLIKTYADAHR--FQDSVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDGKTCSL 174
++D K AD R F SV F + F R +G AI+IL M G + + +
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNP 384
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L C+++ + D + +++ M G +V Y ++ +L K KV DA+ ILNQ+ S
Sbjct: 385 LLHGFCKEKKM--DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P ++ Y V++G+ KA +L DE+ L PD TY+ + GL ++ V+
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
IK E +G +P+ +T+N+++ LCK R+ +R + + M +G +Y+I+I+
Sbjct: 503 AIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIE 562
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSS 382
GLA +G EA LL E NKGL +SS
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKRSS 590
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 150/281 (53%), Gaps = 4/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L+ M+ D T ++++ + C RD + + + EM+ G +V Y +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATC--RDSGVGQAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K+ ++ +A+ LN M S G +P+++ + ++L + ++ AE+L ++L G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V T+N+ IN LC++ + I ++ M + G +P+ ++YN LL CK ++++R E
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ M +G ++ TY+ M+ L G + +A +L + +KG ++ I GL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ G KA++LL +M KD+ P + +L+ LS K+D
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 178/361 (49%), Gaps = 26/361 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
S+L S+ P Y+ ++++L ++ + VLD + +R+ + P+ I + LI+
Sbjct: 193 SVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY--PDVITYTILIE 247
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
R + VG A+++L+ M + G D T +++++ +C++
Sbjct: 248 ATC------------------RDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L DE + F+ +M G ++ + ++RS+ + DA +L M G P +V +
Sbjct: 290 L--DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++N + + +A ++ +++ G P+ +YN ++G CK+ ++ I+ + M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD++TYNT+L ALCK ++ E++ ++ KG L TY+ +IDGLA G +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A LL+E K L + + + GL + G V +A++ + V P A + +++L
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIML 527
Query: 425 S 425
Sbjct: 528 G 528
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 142/280 (50%), Gaps = 5/280 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A +IL + G D T ++++S C+ + E+ + + ++
Sbjct: 149 RMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCK-----AGEINNALSVLDRMSVSPD 203
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++RSL K+ A+ +L++M PD++ YT+++ +A +L D
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLD 263
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PDV TYNV +NG+CK+ ++ IK + M G +P+VIT+N +L+++C
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L+ +M KG ++ T++I+I+ L KG + A +LE+ G S ++
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYN 383
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G C+ + +A+E L++M + P + +L +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 166/350 (47%), Gaps = 23/350 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
+C P Y +I+ +S +LD E R+ TP+ + +++
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGQAMKLLD--EMRDRGCTPDVVTYNVL----------- 280
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGF 193
VN K R+ AI+ LN M + G + T ++IL S+C R + +++LL
Sbjct: 281 -VNGICKE-----GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA- 333
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+M + GF +V + +I L +K + A+ IL +M G +P+ + Y +L+G
Sbjct: 334 --DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCK 391
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
++ +A E + ++ G PD+ TYN + LCK VE ++++ + G P +IT
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNT++ L K + + +L+ EM+ K + + TYS ++ GL+ +G + EA E
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + F+ + GLC+ +A++ L M ++ P + L+
Sbjct: 512 RMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILI 561
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 3/227 (1%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
F V+ N +R LV+ ++ + L M G PDI+ T ++ G KA
Sbjct: 98 FVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAA 157
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
++ + L G VPDV TYNV I+G CK + ++ ++ + PDV+TYNT+L++L
Sbjct: 158 KILEVLEGSGAVPDVITYNVMISGYCKAGEIN---NALSVLDRMSVSPDVVTYNTILRSL 214
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C +L + E++ M + ++ TY+I+I+ + +A LL+E ++G
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDV 274
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
++ + G+C+ G + +A++ L M P +L S S
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 194/415 (46%), Gaps = 37/415 (8%)
Query: 40 QNVKQSLTTPPTK------QQQQIPK-------------QPHI--LSSLLHSFS-IYNCE 77
Q+VKQ L P + Q + +P PH L L SF+ + +
Sbjct: 517 QSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMH 576
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI--DLIKTYADAHRFQDS 135
PPP F K L ++ S+VL + ++F P ++ LI ++ R +
Sbjct: 577 PPPSTVDFT-KLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYA 635
Query: 136 VNLFYKIPK--FRINRV--GFAIEILNCMINDGFCVDGKTC-SLI--LSSVCEQRDLSSD 188
++ K+ K F+ + V G + L MI G D T SLI L ++CE + +++
Sbjct: 636 FSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTT- 694
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+ EM +V ++ V+ +L K+ + A +++ M G++PD+V YT ++
Sbjct: 695 ----LLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 750
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G ++ + +A ++FD ++ G VP+V +YN+ ING C+ ++ + ++ M G
Sbjct: 751 DGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI 810
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
D +TYNTL+ LC V L L EM G + +L TY I++D L + EA L
Sbjct: 811 ADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVL 870
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+ L +++ I G+C+ G + A +L ++ K + P R + ++
Sbjct: 871 LKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 925
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 173/386 (44%), Gaps = 30/386 (7%)
Query: 46 LTTPP---TKQQQQIPKQPHILSSLLHSFSIYN----CEPPPEAYHF--VIKTLAENSQF 96
L+ PP + +P ++L + S +N +PPP F ++ ++A+
Sbjct: 2 LSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH 61
Query: 97 CDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEI 156
S++L + ++F P ++ I + H +NRV FA
Sbjct: 62 ---STLLSLSRQMDSFGIPPDVYTLAIVINSLCH----------------LNRVDFAFSA 102
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
L ++ G D T + ++ +C + + E L +M GF +V Y +I L
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIG--EALHLFDKMIGEGFQPNVVTYGTLINGL 160
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K +V +A I ++M + GI P+IV Y +++G+ ++ L +E++ ++PDV
Sbjct: 161 CKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDV 220
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
+T N ++ LCK+ V ++ M G +P+V+TYN L+ C E++ ++
Sbjct: 221 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 280
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M K V N+ +Y+ +I+G + +A L EE + L + ++ I GLC G
Sbjct: 281 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 340
Query: 397 VRKALELLKQMADKDVSPGARVWEAL 422
++ A+ L +M + P + L
Sbjct: 341 LQDAISLFHEMVARGQIPDLVTYRTL 366
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
VD+ ++ S+ K + L + QM S GI PD+ +V+N + A +
Sbjct: 46 VDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAK 105
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L LG PD T+ I GLC + + + + M G +P+V+TY TL+ LCK R+
Sbjct: 106 ILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQ 165
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + EM KGI N+ TY+ +I GL + L+ E ++ + +
Sbjct: 166 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 225
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ LC+ G+V +A +++ M + V P + AL+
Sbjct: 226 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 10/213 (4%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I K + V A+ + +M + P+ V Y +++G+ A LF
Sbjct: 290 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 349
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G +PD+ TY + LCK +++ + ++ +E PD+ Y T+L +C+
Sbjct: 350 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 409
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
EL R+L + KG+ N+ TY+IMI GL +G + EA L E +NK C+ +
Sbjct: 410 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE-MNKNGCSP----N 464
Query: 386 ETICGLCQRGLVR-----KALELLKQMADKDVS 413
+ L RG +R + +ELL++M + S
Sbjct: 465 DCTYNLITRGFLRNNEALRTIELLEEMLARGFS 497
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+ + EM G +V Y + L K + A+ +L ++ PDI YT +L
Sbjct: 343 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 402
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G+ + A +LF L GL P+V+TYN+ I+GLCKQ + K+ + M + G
Sbjct: 403 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 462
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+ TYN + + + E R EL++EM +G +++ T ++++ L+ G
Sbjct: 463 PNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-------- 514
Query: 369 LEEALNKGLCTQSS 382
L++++ + LC SS
Sbjct: 515 LDQSVKQILCKPSS 528
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 2/271 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N V A+++ + M++ + + + +++ C+ + S D+ + +EM + V
Sbjct: 269 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQ--SVDKAMYLFEEMSRQELTPNTV 326
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L ++ DA+ + ++M + G PD+V Y + + + KA L +
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 386
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PD+ Y ++G+C+ +E + + + G +P+V TYN ++ LCK L
Sbjct: 387 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 446
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+L EM G N TY+++ G + + LLEE L +G S
Sbjct: 447 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLL 506
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+ L GL + ++L + + G ++
Sbjct: 507 VGMLSDDGLDQSVKQILCKPSSSSRPSGTQM 537
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 163/379 (43%), Gaps = 33/379 (8%)
Query: 62 HILSSLLHSFSIYNCEPPPEAY-HFVIKTLAENSQFCDISSVLDHIEKRENFE-TPEFIF 119
H ++LH ++ P + F++ NS SS+L + + + + +F
Sbjct: 120 HSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVF 179
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC-------------------- 159
LI Y D+ D+V F + K + F + I C
Sbjct: 180 DALISAYVDSGFTPDAVQCFRLVTKNK-----FPVPIRGCENLLRRVVRLRPVEIERSWA 234
Query: 160 ----MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+++ G+ ++++ C+ D+ + L+ E+ K G +V + +I
Sbjct: 235 LYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLV--FDEIPKRGLRPTVVSFNTLISG 292
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K V + + M+S+G+ PD+ ++ ++NG+ + + LFDE+ GLVP+
Sbjct: 293 CCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPN 352
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+ I+G CK V+ +K M G +PD++TYN L+ LCKV +L R LV
Sbjct: 353 GVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVN 412
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM G+ + T++ +IDG GD+ A + + +G+ F I GLC+ G
Sbjct: 413 EMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREG 472
Query: 396 LVRKALELLKQMADKDVSP 414
V A +L M P
Sbjct: 473 RVHDAGRMLTDMLSAGFKP 491
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 156/337 (46%), Gaps = 20/337 (5%)
Query: 105 HIEKRENFETPEFIFID-LIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNC-- 159
++E ++ P+ F + L+ + A ++ +F +IPK R V F I C
Sbjct: 236 YLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCK 295
Query: 160 -------------MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
M ++G C D T S +++ +C++ L LL EM G
Sbjct: 296 SGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLL--FDEMCGRGLVPNG 353
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V +T +I K KV AL M + G++PD+V Y ++NG+ D +A L +E
Sbjct: 354 VTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNE 413
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ GL PD T+ I+G CK ++E+ +++ M E G + D + + L+ LC+
Sbjct: 414 MTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGR 473
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ ++ +M G + TY+++ID KGD+ LL+E + G ++
Sbjct: 474 VHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNA 533
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC++G ++ A LL M + V+P + LL
Sbjct: 534 LMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL 570
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A++ M+ G D T + +++ +C+ DL L V EM G +
Sbjct: 367 GKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRL--VNEMTASGLKPDKI 424
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+T +I K + AL I +M +GI+ D V +T +++G+ + A + ++
Sbjct: 425 TFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDM 484
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G PD TY + I+ CK+ +V+ G K++ M+ G P V+TYN L+ LCK ++
Sbjct: 485 LSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQM 544
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
+ L+ M G+ N TY+I++DG + G ++
Sbjct: 545 KNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD 581
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G +G T + ++ C+ + D L Q M G +V Y +I L K
Sbjct: 344 MCGRGLVPNGVTFTTLIDGQCKGGKV--DLALKNFQMMLAQGVRPDLVTYNALINGLCKV 401
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A ++N+M + G+KPD + +T +++G D A E+ ++ G+ D +
Sbjct: 402 GDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAF 461
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+GLC++ V +M+ M G KPD TY ++ CK ++ +L+KEM+
Sbjct: 462 TALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQS 521
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
G V + TY+ +++GL +G + A LL+ LN G+ ++ + G + G
Sbjct: 522 DGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 138/273 (50%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 128 GFYKEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ + I+G CK V+ +++ M PD+ITYNTL+ LCK +L ++
Sbjct: 242 GLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQV 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG +GD+ A ++ + + + + I G
Sbjct: 302 HHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + + P AR + ++
Sbjct: 362 LCQEGRSVDAEKMLREMLNVGLKPDARTYTMII 394
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 106/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N ++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 233 ELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++ L+ +M+ K + P + L+
Sbjct: 293 CKKGDLKQVHHLIDEMSMKGLKPDKITYTTLI 324
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D + L D
Sbjct: 247 GVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 307 EMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 367 RSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G + ++ C+ + D + ++M ++ Y +
Sbjct: 231 ANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLLPDLITYNTL 288
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + ++++M G+KPD + YT +++G + D A E +++ +
Sbjct: 289 IYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENI 348
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ + +
Sbjct: 349 RLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSK 408
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 409 LLKEMQRDGHVPSVVTYNVLMNG 431
>gi|125551761|gb|EAY97470.1| hypothetical protein OsI_19399 [Oryza sativa Indica Group]
Length = 787
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 135/258 (52%), Gaps = 6/258 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +R A ++L CM + D +C +LSS+C+ S+ + + F+ +M G
Sbjct: 214 QAHRPTAAADLLCCMPSLLLDPDPASCRAVLSSLCQY--ASAQDAVAFLDKMCHWGISPS 271
Query: 206 MVDYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
DY V +L+++ KV +A ++ N+M S+G+ P + + +++ ++ EE F
Sbjct: 272 RSDYHAVFDALLQEGKVAEAYEVMKNKMGSNGVAPALAYFKLIMQAFSETAEFDSVEEGF 331
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L+ GLVPDV YNVYI+ LC++ ++ +M+ CME G PD+ T+ ++
Sbjct: 332 DEMLLRGLVPDVDVYNVYISALCRKGDLAGARRMMTCMEHAGCPPDIRTFGVVVSGCMSA 391
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ +RELV+E +G+ + S +I + G +A LL E L + +
Sbjct: 392 GDMGTVRELVQEAIRRGLRWDPTALSELIGLRQAGGGATQAHELLLEPL---FVHDALVL 448
Query: 385 DETICGLCQRGLVRKALE 402
+ I LC++GL+ A +
Sbjct: 449 GQLIGALCKQGLLGPAAQ 466
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 36/202 (17%), Positives = 73/202 (36%), Gaps = 36/202 (17%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L + P+ ++++ + LC+ + A ++ CM L PD + +L +LC+
Sbjct: 193 LAAPSVSPNATSFHILTSTLCQAHRPTAAADLLCCMPSLLLDPDPASCRAVLSSLCQYAS 252
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL----------------- 369
+ +M GI + Y + D L +G + EA ++
Sbjct: 253 AQDAVAFLDKMCHWGISPSRSDYHAVFDALLQEGKVAEAYEVMKNKMGSNGVAPALAYFK 312
Query: 370 -------------------EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+E L +GL +++ I LC++G + A ++ M
Sbjct: 313 LIMQAFSETAEFDSVEEGFDEMLLRGLVPDVDVYNVYISALCRKGDLAGARRMMTCMEHA 372
Query: 411 DVSPGARVWEALLLSSVSKLDF 432
P R + ++ +S D
Sbjct: 373 GCPPDIRTFGVVVSGCMSAGDM 394
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ +N GF VD +T + +L +CE L DE +E+ G V Y +
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL--DEAFRIQKEILGRGCVMDRVSYNTL 559
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+K+ +A L++M G+KPD Y++++ G+ +A + +D+ G+
Sbjct: 560 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 619
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDVYTY+V I+G CK E G + M +P+ + YN L++A C+ L+ E
Sbjct: 620 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 679
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++MK KGI N TY+ +I G++ + EA L EE +GL + I G
Sbjct: 680 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 739
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + K LL++M K+V P + ++
Sbjct: 740 KLGQMVKVECLLREMHSKNVHPNKITYTVMI 770
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 134/281 (47%), Gaps = 5/281 (1%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGF 202
+F+ + A+++ + N G TC+++L+S+ + E V + G
Sbjct: 214 QFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GV 269
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ +T I + K KV +A+ + ++M+ G+ P++V + V++G+ + Y +A
Sbjct: 270 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 329
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++++ G+ P + TY++ + GL + + ++ M + G P+VI YN L+ +
Sbjct: 330 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 389
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ LN+ E+ M KG+ L TY+ +I G G A LL+E L+ G
Sbjct: 390 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 449
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F IC LC + AL + +M +++SPG + L+
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 490
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 23/348 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y ++K L + D VL + K+ F ++ +LI ++ +A
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFIEAGSLNK-- 396
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
AIEI + M++ G + T + ++ C+ + E L ++E
Sbjct: 397 ----------------AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL--LKE 438
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
M +GF +T+VI L+ +FD AL + +M + P T +++G+
Sbjct: 439 MLSIGFNVNQGSFTSVI-CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 497
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ KA EL+ + L G V D T N ++GLC+ ++ ++ + G D ++YN
Sbjct: 498 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 557
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ C ++L+ + EM +G+ + TYSI+I GL + + EA ++
Sbjct: 558 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 617
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + I G C+ + E +M K+V P V+ L+
Sbjct: 618 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 128/296 (43%), Gaps = 24/296 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSL 174
++F I + + +++V LF K+ + + N V F I DG + G+
Sbjct: 274 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI------DGLGMCGRY--- 324
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
DE F ++M + G ++ Y+ +++ L + +++ DA +L +M
Sbjct: 325 -------------DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 371
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P+++ Y +++ I KA E+ D ++ GL TYN I G CK +
Sbjct: 372 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 431
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+++ M +G + ++ +++ LC + V EM + + + +I
Sbjct: 432 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 491
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
GL G +A L + LNKG + + + GLC+ G + +A + K++ +
Sbjct: 492 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 547
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 160/343 (46%), Gaps = 24/343 (6%)
Query: 84 HFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIP 143
+ ++ ++SQ C SS L + K FE F F LI + +R ++
Sbjct: 110 NLLMNCFCQSSQPCLASSFLGKLMKL-GFEPDIFTFTSLINGFCLGNRIEE--------- 159
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
A+ ++N M+ G D + I+ S+C+ + D L +M+ G
Sbjct: 160 ---------AMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHV--DNALSLFNQMENYGIR 208
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V YT+++ L + DA +L M IKPD++ + +++ + + + A+EL
Sbjct: 209 PDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKEL 268
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++E++ + + P+++TY INGLC + ++ +M ME G PDV+ Y +L+ CK
Sbjct: 269 YNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCK 328
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+++ ++ EM KG+ N TY+ +I G G A + +++G+
Sbjct: 329 CKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRT 388
Query: 384 FDETICGLCQRGLVRKALELLKQMADKD---VSPGARVWEALL 423
++ + LC G V KAL + + M ++ V P R + LL
Sbjct: 389 YNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLL 431
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++D+T ++ + K +K + + ++ G+ D+ +++N A
Sbjct: 71 IIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLG 130
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L+ LG PD++T+ ING C N +E + M+ M E+G KPDV+ Y T++ +LCK
Sbjct: 131 KLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNG 190
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L +M+ GI ++ Y+ +++GL + G +A LL + + + F+
Sbjct: 191 HVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFN 250
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G + A EL +M ++P + +L+
Sbjct: 251 ALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLI 288
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 160/353 (45%), Gaps = 28/353 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
SL + Y P Y ++ L + ++ D +L + KR+ P+ I F LI
Sbjct: 197 SLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRK--IKPDVITFNALID 254
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + D A E+ N MI + T + +++ +C +
Sbjct: 255 AFVKEGKLLD------------------AKELYNEMIQMSIAPNIFTYTSLINGLCMEGR 296
Query: 185 LSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
L + ++ E K CF +V YT++I K +KV DA+ I +M G+ + +
Sbjct: 297 LDEARQMFYLMETKG---CFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTIT 353
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT ++ G + A+E+F ++ G+ P++ TYNV ++ LC V + + M+
Sbjct: 354 YTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQ 413
Query: 304 EL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ G P++ TYN LL LC +L + + +M+ + + + + TY+I+I G+ G
Sbjct: 414 KREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAG 473
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ +A L +KG+ + I GL + GL+ +A L ++M + VS
Sbjct: 474 KVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 6/241 (2%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
+ LS LLG ++ FC +Y ++R+ + + +AL + + M P I+
Sbjct: 19 KALSFSRLLGLSFWVR--AFC----NYREILRNGLHSLQFNEALDLFSHMVESRPLPSII 72
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+T +LN + + + L L ++G+ D+YT N+ +N C+ + + +
Sbjct: 73 DFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKL 132
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+LG +PD+ T+ +L+ C + +V +M GI ++ Y+ +ID L G +
Sbjct: 133 MKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHV 192
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A L + N G+ M+ + GLC G R A LL+ M + + P + AL
Sbjct: 193 DNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNAL 252
Query: 423 L 423
+
Sbjct: 253 I 253
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 23/371 (6%)
Query: 81 EAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
+ YH ++ L+ F + S++ D + E +FIDL++ Y A R++ S+ +F
Sbjct: 82 DTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIF 141
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
+IP F + R ++ LN ++N + + L+ + F +
Sbjct: 142 LRIPDFGVKR---SVRSLNTLLN--VLIQNQRFDLVHAM--------------FKNSKES 182
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G + ++++L KK + A +L+++ + G+ P++V YT +L G + + D
Sbjct: 183 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMES 242
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ + +E+L G PD TY V ++G CK ++ ME+ +P+ +TY +++
Sbjct: 243 AKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 302
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
ALCK ++ R + EM + + + +ID L + EACGL + L
Sbjct: 303 ALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 362
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIR 439
+++ I LC+ G V +A +L + DK P + L+ K + R
Sbjct: 363 DNALLSTLIHWLCKEGRVSEARKLFDEF-DKGSIPSLLTYNTLIAGMCEKGELTEAG--R 419
Query: 440 LVDQILNTPCK 450
L D + CK
Sbjct: 420 LWDDMFERKCK 430
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ +N GF VD +T + +L +CE L DE +E+ G V Y +
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL--DEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+K+ +A L++M G+KPD Y++++ G+ +A + +D+ G+
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDVYTY+V I+G CK E G + M +P+ + YN L++A C+ L+ E
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++MK KGI N TY+ +I G++ + EA L EE +GL + I G
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + K LL++M K+V P + ++
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 134/281 (47%), Gaps = 5/281 (1%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGF 202
+F+ + A+++ + N G TC+++L+S+ + E V + G
Sbjct: 201 QFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GV 256
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ +T I + K KV +A+ + ++M+ G+ P++V + V++G+ + Y +A
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++++ G+ P + TY++ + GL + + ++ M + G P+VI YN L+ +
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ LN+ E+ M KG+ L TY+ +I G G A LL+E L+ G
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F IC LC + AL + +M +++SPG + L+
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 477
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 23/348 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y ++K L + D VL + K+ F ++ +LI ++ +A
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFIEAGSLNK-- 383
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
AIEI + M++ G + T + ++ C+ + E L ++E
Sbjct: 384 ----------------AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL--LKE 425
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
M +GF +T+VI L+ +FD AL + +M + P T +++G+
Sbjct: 426 MLSIGFNVNQGSFTSVI-CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ KA EL+ + L G V D T N ++GLC+ ++ ++ + G D ++YN
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ C ++L+ + EM +G+ + TYSI+I GL + + EA ++
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 604
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + I G C+ + E +M K+V P V+ L+
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 128/296 (43%), Gaps = 24/296 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSL 174
++F I + + +++V LF K+ + + N V F I DG + G+
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI------DGLGMCGRY--- 311
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
DE F ++M + G ++ Y+ +++ L + +++ DA +L +M
Sbjct: 312 -------------DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 358
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P+++ Y +++ I KA E+ D ++ GL TYN I G CK +
Sbjct: 359 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+++ M +G + ++ +++ LC + V EM + + + +I
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
GL G +A L + LNKG + + + GLC+ G + +A + K++ +
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 166/350 (47%), Gaps = 21/350 (6%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y C+P Y V+ + ++ Q +L +E+R N + + +I
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLD 280
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++ NLF ++ + + I N +I GFC G+ D+
Sbjct: 281 NAFNLFNEM---EMKGITTNIITYNILIG-GFCNAGRW----------------DDGAKL 320
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+++M K +V ++ +I S VK+ K+ +A + +M GI PD + YT +++G
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ KA ++ D ++ G P++ T+N+ ING CK N ++ G+++ M G D +T
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNTL+Q C++ +LN +EL +EM + + N+ TY I++DGL G+ +A + E+
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +++ I G+C V A +L + K V PG + + ++
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +L ++M+ G + + +I + K+ A + ++ G +P+ + ++ +
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ ++ +A EL D ++ +G PD+ T N +NGLC + +I M E G
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+ +TY +L +CK + EL+++M+ + I L+ YSI+IDGL G + A
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L E KG+ T ++ I G C G +LL+ M + ++P + L+ S V
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 428 SK 429
+
Sbjct: 345 KE 346
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S++++ C R L L F + ++ KLG+ + ++ +I L + +V +AL +
Sbjct: 125 TLSIMINCFCRCRKLC----LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+++M G KPD++ ++NG+ + +A L D+++ G P+ TY +N +CK
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
++++ MEE K D + Y+ ++ LCK L+ L EM+ KGI N+ T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+I+I G + G + LL + + + + F I + G +R+A EL K+M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 409 DKDVSPGARVWEALL 423
+ ++P + +L+
Sbjct: 361 HRGIAPDTITYTSLI 375
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 145/298 (48%), Gaps = 4/298 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+E+++ M+ G D T + +++ +C + LL + +M + G V
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL--IDKMVEYGCQPNAV 229
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y V+ + K + A+ +L +M+ IK D V Y+++++G+ A LF+E+
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G+ ++ TYN+ I G C + G K++ M + P+V+T++ L+ + K +L
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL KEM +GI + TY+ +IDG + + +A +++ ++KG F+
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
I G C+ + LEL ++M+ + V + L+ + KL+ F +V +
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 125/257 (48%), Gaps = 2/257 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + A ++++ M++ G + +T +++++ C+ + D+ L ++M G V
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI--DDGLELFRKMSLRGVVADTV 439
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I+ + K+ A + +M S + P+IV Y ++L+G+ + KA E+F+++
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ D+ YN+ I+G+C + V+ + + G KP V TYN ++ LCK L
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L ++M+ G + TY+I+I GD ++ L+EE G +S
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 388 ICGLCQRGLVRKALELL 404
I L L + L++L
Sbjct: 620 IDMLSDGRLKKSFLDML 636
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 112/231 (48%), Gaps = 1/231 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y +RS + K DA+ + M P ++ ++ + + + + Y L +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + G+ ++YT ++ IN C+ + + + +LG +P+ IT++TL+ LC
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ ELV M G +L T + +++GL G EA L+++ + G + +
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+ +C+ G A+ELL++M ++++ A V ++++ + K ++ +F
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDA-VKYSIIIDGLCKHGSLDNAF 283
>gi|218186287|gb|EEC68714.1| hypothetical protein OsI_37196 [Oryza sativa Indica Group]
Length = 2010
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 132/254 (51%), Gaps = 6/254 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R A ++L CM + D +C +LSS+C+ S+ + + F+ +M G
Sbjct: 1449 HRPAAAADLLCCMPSLLLDPDPASCRAVLSSLCQY--ASAQDAVAFLDKMCHWGISPSRS 1506
Query: 208 DYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
DY V +L+++ KV +A ++ N+M S+ + P + + + + ++ EE+FDE
Sbjct: 1507 DYHAVFDALLQEGKVVEAYEVMKNKMGSNRVAPALAYFKLTMQAFSKCLEFDSVEEVFDE 1566
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L+ GLVPDV YNVYI LC++ ++ +M+ CME G PDV T+ ++ +
Sbjct: 1567 MLLRGLVPDVDVYNVYIGALCRKGDLARARQMMTCMEHAGCPPDVRTFGVVVAGCMSAGD 1626
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ +RELV+E +G+ + S +I L + G +A LL E L + + +
Sbjct: 1627 MGTVRELVQEATRRGLQWDPPALSELIGLLQAGGGATQAQELLLEPL---FVHDAPVLGQ 1683
Query: 387 TICGLCQRGLVRKA 400
I LC++GL+ A
Sbjct: 1684 LIGALCKQGLLGPA 1697
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 104/259 (40%), Gaps = 18/259 (6%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN---VIRSLVKKEKVFDALGILNQ 231
+L+++C SS L F ++ L D T + +L + + A +L
Sbjct: 1406 LLAAIC-----SSPAFLRFAPKVLLLAAPSVSPDATTFHILTSTLCQAHRPAAAADLLCC 1460
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M S + PD VL+ + A D++ G+ P Y+ + L ++
Sbjct: 1461 MPSLLLDPDPASCRAVLSSLCQYASAQDAVAFLDKMCHWGISPSRSDYHAVFDALLQEGK 1520
Query: 292 VEAGIKMIACMEELGSK---PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
V +++ ++GS P + + +QA K E + + E+ EM +G+V ++
Sbjct: 1521 VVEAYEVMK--NKMGSNRVAPALAYFKLTMQAFSKCLEFDSVEEVFDEMLLRGLVPDVDV 1578
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y++ I L KGD+ A ++ + G F + G G + EL+++
Sbjct: 1579 YNVYIGALCRKGDLARARQMMTCMEHAGCPPDVRTFGVVVAGCMSAGDMGTVRELVQEAT 1638
Query: 409 DKDVSPGARVWEALLLSSV 427
+ + W+ LS +
Sbjct: 1639 RRGLQ-----WDPPALSEL 1652
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 76/202 (37%), Gaps = 36/202 (17%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L + PD T+++ + LC+ + A ++ CM L PD + +L +LC+
Sbjct: 1426 LAAPSVSPDATTFHILTSTLCQAHRPAAAADLLCCMPSLLLDPDPASCRAVLSSLCQYAS 1485
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL----------------- 369
+ +M GI + Y + D L +G ++EA ++
Sbjct: 1486 AQDAVAFLDKMCHWGISPSRSDYHAVFDALLQEGKVVEAYEVMKNKMGSNRVAPALAYFK 1545
Query: 370 -------------------EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+E L +GL +++ I LC++G + +A +++ M
Sbjct: 1546 LTMQAFSKCLEFDSVEEVFDEMLLRGLVPDVDVYNVYIGALCRKGDLARARQMMTCMEHA 1605
Query: 411 DVSPGARVWEALLLSSVSKLDF 432
P R + ++ +S D
Sbjct: 1606 GCPPDVRTFGVVVAGCMSAGDM 1627
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 169/360 (46%), Gaps = 25/360 (6%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +++ L Q + ++L+ I ++ LI Y + RF+++ +L Y
Sbjct: 312 TYGYLMHGLCRMGQVDEARALLNKIPNPNTV-----LYNTLISGYVASGRFEEAKDLLYN 366
Query: 142 ---IPKFRINRVGF---------------AIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
I + + F A+E+LN M+ F + T +++++ C+Q
Sbjct: 367 NMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQG 426
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
L +E V M G V Y +I +L K + +AL + +M G KPDI
Sbjct: 427 RL--EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYT 484
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+ ++NG+ +A L+ ++ + G++ + TYN ++ +++++ K++ M
Sbjct: 485 FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G D ITYN L++ALCK + + L +EM KGI + + +I+I GL G +
Sbjct: 545 FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVN 604
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A L++ +++GL ++ I GLC+ G V++A L ++ + + P A + L+
Sbjct: 605 DALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 177/409 (43%), Gaps = 50/409 (12%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL + + C P Y +I L EN++ +S L +E + L+
Sbjct: 226 SLLRDMAKHGCVPNSVIYQTLIHALCENNR---VSEALQLLED-----------MFLMCC 271
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
D F D ++ R R+ A ++L+ M+ GF D T ++ +C +
Sbjct: 272 EPDVQTFNDVIHGLC-----RAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQV 326
Query: 186 SSDELL----------------------GFVQEMKKL--------GFCFGMVDYTNVIRS 215
L G +E K L G+ + +I
Sbjct: 327 DEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDG 386
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
LVKK + AL +LN+M + +P+++ YT+++NG Q +A E+ + + GL +
Sbjct: 387 LVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLN 446
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
YN I LCK N+E +++ M G KPD+ T+N+L+ LCK ++ L
Sbjct: 447 TVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYH 506
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
+M +G++ N TY+ ++ + I +A L++E L +G + ++ I LC+ G
Sbjct: 507 DMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTG 566
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
V K L L ++M K + P + +L+S + + VN + L D I
Sbjct: 567 AVEKGLGLFEEMLGKGIFP-TIISCNILISGLCRTGKVNDALKFLQDMI 614
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 162/364 (44%), Gaps = 21/364 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L ++ I EP ++ +I L + +L+ + + FE + LI +
Sbjct: 364 LYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKR-FEPNVITYTILINGF 422
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R ++ A EI+N M G ++ + ++ ++C +D +
Sbjct: 423 CKQGRLEE------------------AAEIVNSMSAKGLSLNTVGYNCLICALC--KDGN 462
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+E L EM G + + ++I L K K+ +AL + + M +G+ + V Y
Sbjct: 463 IEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNT 522
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ ++++ +A +L DE+L G D TYN I LCK VE G+ + M G
Sbjct: 523 LVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKG 582
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P +I+ N L+ LC+ ++N + +++M +G+ ++ TY+ +I+GL G + EA
Sbjct: 583 IFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEAS 642
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
L + ++G+ + ++ I C G+ A LL + D P W L+
Sbjct: 643 NLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYI 702
Query: 427 VSKL 430
V K+
Sbjct: 703 VKKI 706
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 162/393 (41%), Gaps = 53/393 (13%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+A + +I L F I +L + K E E +FI ++K Y A + L
Sbjct: 100 DACYLLIDKLGAVGDFKVIEKLLKQM-KDEGLLFKESLFILIMKHYGKAGLPGQATRLLL 158
Query: 141 KI-------PKFRINRVGFAI-----------EILNCMINDGFCVDGKTCSLILSSVCEQ 182
+ P F+ V I + M++ G T +++ ++C
Sbjct: 159 DMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMV 218
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
++ D +++M K G V Y +I +L + +V +AL +L M +PD+
Sbjct: 219 SEV--DSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQ 276
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE--------- 293
+ V++G+ +A +L D +L+ G D TY ++GLC+ V+
Sbjct: 277 TFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI 336
Query: 294 ------------AGIKMIACMEE-----------LGSKPDVITYNTLLQALCKVRELNRL 330
+G EE G +PD T+N ++ L K L
Sbjct: 337 PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSA 396
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL+ EM K N+ TY+I+I+G +G + EA ++ KGL + ++ IC
Sbjct: 397 LELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICA 456
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G + +AL+L +M+ K P + +L+
Sbjct: 457 LCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLI 489
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 121/227 (53%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ + M+ F V Y +I SL + K+ AL +LNQ+ SD +P ++ YT++
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ +++ +A +L DE+L GL PD++TYN I G+CK+ V+ +M+ +E G
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDVI+YN LL+AL + +L+ +M + N+ TYSI+I L G I EA
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
LL+ KGL + +D I C+ G + A+E L+ M P
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++NR+ A +L+ M + F D T ++++ S+C + L D L + ++
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL--DLALKVLNQLLSDNCQPT 227
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT +I + + + V +AL ++++M S G+KPD+ Y ++ G+ + +A E+
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L + G PDV +YN+ + L Q E G K++ M P+V+TY+ L+ LC+
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L+K MK KG+ + +Y +I +G + A LE ++ G ++
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ LC+ G +ALE+ ++ + SP + + +
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 174/406 (42%), Gaps = 61/406 (15%)
Query: 55 QQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET 114
+ IPK ++ +L F +P AY+ +I + ++ D + VLD + ++ F
Sbjct: 138 RNIPKAVRVME-ILEKFG----QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD-FSP 191
Query: 115 PEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSL 174
+ +I + ++ A+++LN +++D T ++
Sbjct: 192 DTVTYNIMIGSLCSR------------------GKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ + + + DE L + EM G M Y +IR + K+ V A ++ ++
Sbjct: 234 LIEATMLEGGV--DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEEL----FDE------------------------ 266
G +PD++ Y ++L ++ Q + + E+L F E
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 267 ---LLVL----GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
LL L GL PD Y+Y+ I C++ ++ I+ + M G PD++ YNT+L
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK + ++ E+ ++ G N +Y+ M L S GD I A ++ E ++ G+
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++ I LC+ G+V +A ELL M + P + +LL
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 139/274 (50%), Gaps = 9/274 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD---Y 209
++ +L M+ G+ D C+ ++ R++ + + ++ ++K FG D Y
Sbjct: 108 SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIP--KAVRVMEILEK----FGQPDVFAY 161
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I K ++ DA +L++M+S PD V Y +++ + + A ++ ++LL
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
P V TY + I + V+ +K++ M G KPD+ TYNT+++ +CK ++R
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
E+V+ ++ KG ++ +Y+I++ L ++G E L+ + ++ + I
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G + +A+ LLK M +K ++P A ++ L+
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S++++++C RD +E + ++ MK+ G Y +I + ++ ++ A+ L
Sbjct: 335 TYSILITTLC--RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M SDG PDIV Y VL + +A E+F +L +G P+ +YN + L
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + MI M G PD ITYN+++ LC+ ++ EL+ +M+ ++ TY+
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ G I +A +LE + G + + I G+ G +A+EL +
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Query: 411 DV 412
D
Sbjct: 573 DA 574
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+Y+++ L + ++ G PDV I G N+ ++++ +E+ G +PDV YN
Sbjct: 104 NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYN 162
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK---------------- 359
L+ CK+ ++ ++ M+ K + TY+IMI L S+
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 360 -------------------GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G + EA L++E L++GL ++ I G+C+ G+V +A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 401 LELLKQMADKDVSPGARVWEALL 423
E+++ + K P + LL
Sbjct: 283 FEMVRNLELKGCEPDVISYNILL 305
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++ M+++G D T + ++S +C R+ DE + +M+ F +V Y V
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLC--REGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ K ++ DA+ +L M +G +P+ YT+++ G+ +A EL ++L+
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 174/352 (49%), Gaps = 23/352 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
N P Y+ +++TL ++ + VLD ++E + P+ I + LI+
Sbjct: 154 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECY--PDVITYTILIEATC------ 205
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+ + VG A+++L+ M N G D T +++++ +C++ L DE + F
Sbjct: 206 ------------KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL--DEAIKF 251
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ M G ++ + ++RS+ + DA +L+ M G P +V + +++N +
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 311
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
Q +A ++ +++ + G P+ +YN ++G CK+ ++ I+ + M G PD++T
Sbjct: 312 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNTLL ALCK +++ E++ ++ KG L TY+ +IDGL+ G A LL+E
Sbjct: 372 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 431
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
KGL + + GL + G V +A++ + + P A + +++L
Sbjct: 432 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 158/316 (50%), Gaps = 21/316 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ Y C+P ++ +++++ ++ D +L + ++ +P + +++
Sbjct: 251 FLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC--SPSVVTFNIL--- 305
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+N R +G AI+IL M G + + + +L C+++ +
Sbjct: 306 ---------INFL-----CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM- 350
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + ++ M G +V Y ++ +L K KV A+ ILNQ+ S G P ++ Y
Sbjct: 351 -DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ +A +L DE+ GL PD+ TY+ ++GL ++ V+ IK +E LG
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P+ ITYN+++ LCK R+ +R + + M K TY+I+I+G+A +G EA
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 529
Query: 367 GLLEEALNKGLCTQSS 382
LL E ++GL +SS
Sbjct: 530 DLLNELCSRGLVKKSS 545
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI + A ++ + G D T ++++S C+ S E+ +Q + ++
Sbjct: 104 RIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK-----SGEIDNALQVLDRMNVAPD 158
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++R+L K+ A+ +L++ PD++ YT+++ + +A +L D
Sbjct: 159 VVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLD 218
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PDV TYNV ING+CK+ ++ IK + M G +P+VIT+N +L+++C
Sbjct: 219 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 278
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L+ +M KG ++ T++I+I+ L +G + A +LE+ G S ++
Sbjct: 279 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 338
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G C+ + +A+E L M + P + LL +
Sbjct: 339 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 378
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 5/239 (2%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
N +R LV+ ++ D L M G PDI+ T ++ G KA + + L
Sbjct: 62 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 121
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G VPDV TYNV I+G CK ++ +++ ++ + PDV+TYNT+L+ LC +L +
Sbjct: 122 GAVPDVITYNVLISGYCKSGEIDNALQV---LDRMNVAPDVVTYNTILRTLCDSGKLKQA 178
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
E++ K ++ TY+I+I+ + + +A LL+E NKG ++ I G
Sbjct: 179 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 238
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+C+ G + +A++ L M P +L S S +++ +L+ +L C
Sbjct: 239 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAE--KLLSDMLRKGC 295
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 154/354 (43%), Gaps = 24/354 (6%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQD 134
C P Y +I+ + S +LD E R P+ + + LI R +
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLD--EMRNKGSKPDVVTYNVLINGICKEGRLDE 247
Query: 135 SVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDG---------KTCS-------LIL 176
++ +P + + N + I IL M + G +D K CS +++
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNI-ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 306
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C Q L + +++M G + Y ++ K++K+ A+ L+ M S G
Sbjct: 307 NFLCRQGLLG--RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 364
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
PDIV Y +L + A E+ ++L G P + TYN I+GL K E I
Sbjct: 365 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 424
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K++ M G KPD+ITY++L+ L + +++ + +++ GI N TY+ ++ GL
Sbjct: 425 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 484
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
A L ++K + + I G+ GL ++AL+LL ++ +
Sbjct: 485 CKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 538
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
++ L + +E G K + M G PD+I +L++ C++ + + +++ ++ G
Sbjct: 63 HLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSG 122
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
V ++ TY+++I G G+I A +L+ + ++ + LC G +++A+
Sbjct: 123 AVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAM 179
Query: 402 ELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
E+L + K+ P + +L+ + K V + ++L+D++ N K
Sbjct: 180 EVLDRQLQKECYPDVITY-TILIEATCKESGVGQA-MKLLDEMRNKGSK 226
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 119/236 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ L + ++MK G V YT +I + + +AL + ++M G D+V Y +
Sbjct: 411 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 470
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG+ ++ +A+ELF E+ G+ PD YT+ ING K N+ + + M +
Sbjct: 471 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 530
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPDV+TYNTL+ CK E+ ++ EL +M + I N +Y I+I+G + G + EA
Sbjct: 531 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 590
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E + KG + + G C+ G KA E L M K + P + L+
Sbjct: 591 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 646
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 160/324 (49%), Gaps = 19/324 (5%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNC 159
+F L++TY A + ++ F + ++ V A EI
Sbjct: 185 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 244
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
++ G V+ T +++++++C+ + + + + F+ +M++ G +V Y +I + ++
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTK--SFLSDMEEKGVFPDVVTYNTLINAYCRQ 302
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A +++ M G+KP + Y ++NG+ Y++A+ + DE+L +G+ PD TY
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 362
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ + C+ +N+ ++ M G PD+++++ L+ L K L++ + ++MK
Sbjct: 363 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ + Y+I+I G G + EA + +E L +G ++ + GLC+ ++ +
Sbjct: 423 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 482
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A EL +M ++ V P + L+
Sbjct: 483 ADELFTEMTERGVFPDFYTFTTLI 506
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 140/278 (50%), Gaps = 4/278 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A+++ + M+ G +D T + IL+ +C+++ LS +DEL EM + G +T
Sbjct: 448 ALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF---TEMTERGVFPDFYTFTT 504
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K + A+ + M +KPD+V Y +++G + K EL+++++
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 564
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ +Y + ING C V ++ M E G + +IT NT+++ C+ +
Sbjct: 565 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 624
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E + M KGIV + TY+ +I+G + ++ A L+ + N GL ++ + G
Sbjct: 625 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 684
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++G +++A ++ +M ++ V+P + +L+ V++
Sbjct: 685 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQ 722
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 142/324 (43%), Gaps = 39/324 (12%)
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
L+ M G D T + ++++ C Q L +E + M G + Y +I L
Sbjct: 277 LSDMEEKGVFPDVVTYNTLINAYCRQGLL--EEAFELMDSMSGKGLKPCVFTYNAIINGL 334
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K K A G+L++M G+ PD Y ++L ++ + AE +FDE+ G+VPD+
Sbjct: 335 CKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDL 394
Query: 277 YT-----------------------------------YNVYINGLCKQNNVEAGIKMIAC 301
+ Y + I G C+ + +K+
Sbjct: 395 VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 454
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M E G DV+TYNT+L LCK + L+ EL EM +G+ + T++ +I+G + G+
Sbjct: 455 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 514
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ +A L E + + L ++ I G C+ + K EL M + + P +
Sbjct: 515 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN-HISYG 573
Query: 422 LLLSSVSKLDFVNTSFIRLVDQIL 445
+L++ + V+ +F RL D+++
Sbjct: 574 ILINGYCNMGCVSEAF-RLWDEMV 596
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 82/156 (52%)
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V +A + ++M G + I+ ++ G + VKA+E +L+ G+VPD TYN
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
ING K+ N++ ++ ME G PDVITYN +L + + ++ +M +G
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ + TY+ +I+G ++ ++ EA + +E L +G
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 740
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD-LSSDELLGFVQEMKKLGFCFGMVD 208
V A + + M+ GF TC+ I+ C + + +DE F+ M G +
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE---FLSNMLLKGIVPDGIT 641
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I +K+E + A ++N+M++ G+ PD++ Y ++LNG Q +AE + +++
Sbjct: 642 YNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMI 701
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
G+ PD TY ING QNN++ ++ M + G PD
Sbjct: 702 ERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 30/284 (10%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFY 140
Y+ ++ L + + + + +R F P+F F LI Y+ +V LF
Sbjct: 466 TYNTILNGLCKEKMLSEADELFTEMTERGVF--PDFYTFTTLINGYSKDGNMNKAVTLFE 523
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCSLILSSV 179
+ + + + N +I DGFC + + ++++
Sbjct: 524 MMIQRNLKP---DVVTYNTLI-DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 579
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C +S E EM + GF ++ +++ + A L+ M GI P
Sbjct: 580 CNMGCVS--EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 637
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D + Y ++NG I +E+ +A L +++ GL+PDV TYNV +NG +Q ++ ++
Sbjct: 638 DGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIM 697
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
M E G PD TY +L+ L + EM +G V
Sbjct: 698 LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 741
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQM--KSDGIKPDIV---------CYTMVLNG 250
F + ++ +I LV+ ++ DA ++ +M KS + +IV C + L
Sbjct: 128 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 187
Query: 251 VIVQEDYVKAEEL------FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ YV+A +L F L GL + N + GL K V+ ++ +
Sbjct: 188 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 247
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G + +V T N ++ ALCK +++ + + +M+ KG+ ++ TY+ +I+ +G + E
Sbjct: 248 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 307
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A L++ KGL ++ I GLC+ G +A +L +M +SP + LL+
Sbjct: 308 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLV 367
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 35/270 (12%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E +G + EM + + +I L K+ +V A +L+ M G++P++V YT ++
Sbjct: 247 EAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLM 306
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME----- 303
+G + ++ KA+ +F+ + + G+ P+V++Y+V INGLCK V+ +K+ M
Sbjct: 307 DGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMT 366
Query: 304 ------------------------------ELGSKPDVITYNTLLQALCKVRELNRLREL 333
G ++ITYN+LL LCK ++++ L
Sbjct: 367 PNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIAL 426
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ +MK +GI ++ TY+ ++DGL G + +A + ++ L KG M+ I GLC+
Sbjct: 427 LTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCK 486
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
G +AL LL QM D P A +E L+
Sbjct: 487 EGFFDEALSLLSQMEDNGCMPDAVTYETLI 516
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 180/381 (47%), Gaps = 27/381 (7%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
+SS H + N PP ++ ++ +L + + F S +E + + F F LI
Sbjct: 37 VSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELK-GIQPEMFTFNILI 95
Query: 124 KTYADAHRFQDSVNLFYKIPKF-------RIN----------RVGFAIEILNCMINDGFC 166
++ + + ++ KI K +N +V A+ + +I F
Sbjct: 96 NCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFH 155
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-GFCFGMVD---YTNVIRSLVKKEKV 222
+D + +++ +C+ S E +Q ++K+ G D YT +I S K + V
Sbjct: 156 LDQVSYGTLINGLCK-----SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLV 210
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DA + ++M I P++V + ++ G + +A L +E+ + + P+VYT+N+
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+GLCK+ V+ +++ M + G +P+V+TY +L+ V+E+N+ + + + +G+
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
N+ +YS+MI+GL + EA L +E K + + + I GLC+ G + +
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390
Query: 403 LLKQMADKDVSPGARVWEALL 423
L+ ++ ++ + +LL
Sbjct: 391 LIDEINNRGQPANIITYNSLL 411
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 155/312 (49%), Gaps = 23/312 (7%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG--KTCSLIL 176
F LI + + +++V L + + +N V + N +I DG C +G K + +L
Sbjct: 232 FNSLIYGFCIVGQLKEAVGL---LNEMSLNNVNPNVYTFNILI-DGLCKEGEVKKATSVL 287
Query: 177 SSVCEQ----RDLSSDELL-GF--VQEMKKLGFCFGMVD----------YTNVIRSLVKK 219
S + +Q ++ L+ G+ V+E+ K F + Y+ +I L K
Sbjct: 288 SVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKN 347
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ V +A+ + +M + P+ V Y+ +++G+ +L DE+ G ++ TY
Sbjct: 348 KMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITY 407
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N +NGLCK + V+ I ++ M++ G +PD+ TY TL+ LCK L + + +++
Sbjct: 408 NSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLC 467
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG LN++ Y++MI+GL +G EA LL + + G + ++ I L + K
Sbjct: 468 KGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGK 527
Query: 400 ALELLKQMADKD 411
A++LL++M ++
Sbjct: 528 AVKLLREMIARE 539
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 149/285 (52%), Gaps = 3/285 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ + M+ G D T S I++ +C+ + + L +++M++ G +V Y +
Sbjct: 29 AVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM--ALQLLKKMEEKGCKPNVVAYNTI 86
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K V +A+ ++M +GI PD+ Y+ +L+G +A LF +++ +
Sbjct: 87 IDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNV 146
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P+ T+ + I+GLCK+ + + M E G +PDV TYN L+ C +++ ++
Sbjct: 147 IPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQK 206
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L M KG N+++Y+I+I+G G I EA GLL E +K L + + G C
Sbjct: 207 LFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFC 266
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
Q G ++A ELLK+M + P + +++L + K ++ +F
Sbjct: 267 QVGRPQEAQELLKEMCSYGLLPNLITY-SIVLDGLCKHGHLDEAF 310
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 177/396 (44%), Gaps = 26/396 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEK--RENFETPEFIFIDLIK 124
LL C+P AY+ +I +L ++ ++ +D + +E F + ++
Sbjct: 67 LLKKMEEKGCKPNVVAYNTIIDSLCKDRL---VTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 125 TYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEI---------------LNCMINDGFCV 167
+ + R ++ +LF ++ + + N+V F I I M G
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + ++ C + + DE M + G + Y +I K ++ +A G
Sbjct: 184 DVYTYNALVDGYCSRSQM--DEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +M + PDI Y+ ++ G +A+EL E+ GL+P++ TY++ ++GLC
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K +++ +++ M+E +P++ Y L++ +C +L REL + KGI +
Sbjct: 302 KHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVV 361
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY++MI GL G EAC L E G S ++ I G + G A+ L+++M
Sbjct: 362 TYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQ 443
K S + + +LS + D + + F+R Q
Sbjct: 422 VGKGFSADSSTFR--MLSDLESSDEIISQFMRGSSQ 455
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 108/188 (57%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G++P +V + +L+G+ + + A +LFDE++ +G PDV TY+ INGLCK N
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++++ MEE G KP+V+ YNT++ +LCK R + + EM +GI ++ TYS ++ G
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+ G + EA L ++ + + + F I GLC++ ++ +A + + M +K + P
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184
Query: 416 ARVWEALL 423
+ AL+
Sbjct: 185 VYTYNALV 192
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M KLG +V + ++ L K K+ DA+ + ++M G +PD++ Y+ ++NG+ +
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A +L ++ G P+V YN I+ LCK V + + M + G PDV TY++
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+L C + +N L K+M + ++ N T++I+IDGL K I EA + E KG
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L ++ + G C R + +A +L M K +P R + L+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILI 227
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 140/262 (53%), Gaps = 2/262 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ ++ A IL M+ + + T ++++ C+ +LS+ L +EM+ G
Sbjct: 280 RVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAA--LKVFEEMQSQGLKPT 337
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +++ L + K+ +A +L++M S +KP+++ Y ++NG ++ +A ELFD
Sbjct: 338 VVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFD 397
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ GL P+V T+N ++G CK +E + M E G P+ TYN L+ C+
Sbjct: 398 NIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREG 457
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ ++ L+ EM+ +G+ + TY+I+I K + +A L++E L+KGL ++
Sbjct: 458 KMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYN 517
Query: 386 ETICGLCQRGLVRKALELLKQM 407
+ G C G +R AL L KQM
Sbjct: 518 ILLNGYCMEGNLRAALNLRKQM 539
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 160/328 (48%), Gaps = 14/328 (4%)
Query: 102 VLDHIEKRENFETPEFIFIDLI--KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC 159
+L + K F EF++ ++I K + F +N K+ K +N+ G ++++
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGK--LNKAG---DVVDD 255
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLS----SDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
M GF + T + ++ C+ + +D +L +EM + V + +I
Sbjct: 256 MKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAIL---KEMVENKVSPNSVTFNVLIDG 312
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K E + AL + +M+S G+KP +V Y ++NG+ + +A+ L DE+L L P+
Sbjct: 313 FCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPN 372
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V TYN ING CK+ +E ++ + + G P+VIT+NTLL CK ++ L K
Sbjct: 373 VITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQK 432
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M KG + N TY+ +I G +G + E LL E +G+ + ++ I C++
Sbjct: 433 VMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKK 492
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+KA L+ +M DK + P + LL
Sbjct: 493 EPKKAARLIDEMLDKGLKPSHLTYNILL 520
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 133/259 (51%), Gaps = 7/259 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+C+ +LS++ ++ + E + +EM + ++ + VI L K K+ A +++
Sbjct: 197 SCNPLLSALVKENEFGGVEFV--YKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254
Query: 231 QMKSDGIKPDIVCYTMVLNGVI----VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
MK G P++V Y +++G V + Y KA+ + E++ + P+ T+NV I+G
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY-KADAILKEMVENKVSPNSVTFNVLIDGF 313
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK N+ A +K+ M+ G KP V+TYN+L+ LC +LN + L+ EM + N+
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +I+G K + EA L + +GL F+ + G C+ G + +A L K
Sbjct: 374 ITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKV 433
Query: 407 MADKDVSPGARVWEALLLS 425
M +K P A + L++
Sbjct: 434 MLEKGFLPNASTYNCLIVG 452
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 2/220 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + + G + T + +L C+ + LL V M + GF Y +
Sbjct: 392 ARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKV--MLEKGFLPNASTYNCL 449
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I ++ K+ + +LN+M+ G+K D V Y ++++ +++ KA L DE+L GL
Sbjct: 450 IVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGL 509
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P TYN+ +NG C + N+ A + + ME+ G +V+TYN L+Q C+ +L
Sbjct: 510 KPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANG 569
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
L+ EM KG++ N TY I+ + + KG + + G L A
Sbjct: 570 LLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYHA 609
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 110/225 (48%), Gaps = 3/225 (1%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
FC + ++ + V+ K L + K ++ +L+ ++ + ++ E
Sbjct: 156 FCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVE 215
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
++ E++ + P++ T+N INGLCK + ++ M+ G P+V+TYNTL+
Sbjct: 216 FVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGY 275
Query: 322 CKVRELNRLRE---LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
CK+ + ++ + ++KEM + N T++++IDG ++ A + EE ++GL
Sbjct: 276 CKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + GLC G + +A LL +M ++ P + AL+
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 125/229 (54%), Gaps = 2/229 (0%)
Query: 197 MKKLGFCFGMVD--YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
MK++G+ G++D Y +V+ SLVK +K+ A + QM ++G+ + + YT ++ ++
Sbjct: 277 MKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLK 336
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
E A +L D+++ PDV TY + I+ LCK+ +E ++ M E G +P++ TY
Sbjct: 337 EKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTY 396
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N L+Q LC VR ELV M+ G+ N+ TY+I+ GL + A + EAL
Sbjct: 397 NALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALA 456
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+GL ++ + G C+ + +A+++LK+M D +P + L+
Sbjct: 457 RGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLI 505
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 164/331 (49%), Gaps = 21/331 (6%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+AY +I L F ++ S+L ++ + E + + +Y + RF++S+ F
Sbjct: 217 DAYFTMIDILGRAKMFTELQSLLQKMQT-QGREITRSMLHSFVMSYGRSGRFKESLEAFN 275
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+ + +G+ +++ N +L S+ + + L E L F Q M
Sbjct: 276 LMKE-----MGYEPGLIDTAYNS-----------VLVSLVKNKKLDMAENL-FAQ-MINN 317
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G + YT++I+ KEK+ DA+ +L+ M + PD+V YT+V++ + ++ +A
Sbjct: 318 GVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQA 377
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ ++ G P++YTYN I GLC E ++++ ME+ G P++ TY L
Sbjct: 378 YGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHG 437
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK+R L+R +E+ E +G+ N TY+ +++G +IEA +L+E +++ CT
Sbjct: 438 LCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKE-MHQNDCTP 496
Query: 381 SSM-FDETICGLCQRGLVRKALELLKQMADK 410
+ + I GL Q + AL + +M +K
Sbjct: 497 DHVTYTTLIQGLVQGNQLPDALRMHDEMENK 527
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 143/271 (52%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++L+ MI + + D T ++++S++C+++ + ++ G +Q+M++ G + Y +
Sbjct: 342 AMKLLDDMIQNNYAPDVVTYTIVISALCKRKMI--EQAYGVLQKMRENGCEPNIYTYNAL 399
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ L + +AL ++ M+ G+ P+I YT++ +G+ +A+E+F+E L GL
Sbjct: 400 IQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGL 459
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN +NG C+ + + + ++ M + PD +TY TL+Q L + +L
Sbjct: 460 KPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALR 519
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM+ KG +N T +I+ GLA G+ +A ++G +S + I L
Sbjct: 520 MHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLS 579
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + +A LL +M +K SP + ++
Sbjct: 580 TAGEMEEAQALLYEMINKGYSPNLTTYNTMI 610
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 27/202 (13%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE---NFETPEFIFIDLIKTYADAHR 131
+C P Y +I+ L + +Q D + D +E + NF+T L + A
Sbjct: 493 DCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNI----LARGLARVGN 548
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
+D+ ++FY+ R+ GFA L+ C +E
Sbjct: 549 HKDA-SIFYR----RMKDRGFAY---------------SASDYYLAIHCLSTAGEMEEAQ 588
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+ EM G+ + Y +I+ ++ ++ DA +LN M +GI PD Y +++
Sbjct: 589 ALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEF 648
Query: 252 IVQEDYVKAEELFDELLVLGLV 273
Q A++L+ L G+V
Sbjct: 649 HNQGRTQDADQLYATALERGVV 670
>gi|222616496|gb|EEE52628.1| hypothetical protein OsJ_34969 [Oryza sativa Japonica Group]
Length = 781
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 6/256 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +R A ++L CM + D +C +LSS+C+ S+ + + F+ +M G
Sbjct: 218 QAHRPAAAADLLCCMPSLLLDPDPASCRAVLSSLCQY--ASAQDAVAFLDKMCHWGISPS 275
Query: 206 MVDYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
DY V +L+++ KV +A ++ N+M S+ + P + + + + ++ EE+F
Sbjct: 276 RSDYHAVFEALLQEGKVVEAYEVMKNKMGSNRVAPALAYFKLTMQAFSKCLEFDSVEEVF 335
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L+ GLVPDV YNVYI LC++ ++ +M+ CME G PDV T+ ++
Sbjct: 336 DEMLLRGLVPDVDVYNVYIGALCRKGDLARARQMMTCMEHAGCPPDVRTFGVVVAGCMSA 395
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ +RELV+E +G+ + S +I L + G +A LL E L + +
Sbjct: 396 GDMGTVRELVQEATRRGLQWDPPALSELIGLLQAGGGATQAQELLLEPL---FVHDAPVL 452
Query: 385 DETICGLCQRGLVRKA 400
+ I LC++GL+ A
Sbjct: 453 GQLIGALCKQGLLGPA 468
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 18/257 (7%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN---VIRSLVKKEKVFDALGILNQ 231
+L+++C SS L F ++ L D T + +L + + A +L
Sbjct: 177 LLAAIC-----SSPAFLRFAPKVLLLAAPSVSPDATTFHILTSTLCQAHRPAAAADLLCC 231
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M S + PD VL+ + A D++ G+ P Y+ L ++
Sbjct: 232 MPSLLLDPDPASCRAVLSSLCQYASAQDAVAFLDKMCHWGISPSRSDYHAVFEALLQEGK 291
Query: 292 VEAGIKMIACMEELGSK---PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
V +++ ++GS P + + +QA K E + + E+ EM +G+V ++
Sbjct: 292 VVEAYEVM--KNKMGSNRVAPALAYFKLTMQAFSKCLEFDSVEEVFDEMLLRGLVPDVDV 349
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y++ I L KGD+ A ++ + G F + G G + EL+++
Sbjct: 350 YNVYIGALCRKGDLARARQMMTCMEHAGCPPDVRTFGVVVAGCMSAGDMGTVRELVQEAT 409
Query: 409 DKDVSPGARVWEALLLS 425
+ + W+ LS
Sbjct: 410 RRGLQ-----WDPPALS 421
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/202 (18%), Positives = 76/202 (37%), Gaps = 36/202 (17%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L + PD T+++ + LC+ + A ++ CM L PD + +L +LC+
Sbjct: 197 LAAPSVSPDATTFHILTSTLCQAHRPAAAADLLCCMPSLLLDPDPASCRAVLSSLCQYAS 256
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL----------------- 369
+ +M GI + Y + + L +G ++EA ++
Sbjct: 257 AQDAVAFLDKMCHWGISPSRSDYHAVFEALLQEGKVVEAYEVMKNKMGSNRVAPALAYFK 316
Query: 370 -------------------EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+E L +GL +++ I LC++G + +A +++ M
Sbjct: 317 LTMQAFSKCLEFDSVEEVFDEMLLRGLVPDVDVYNVYIGALCRKGDLARARQMMTCMEHA 376
Query: 411 DVSPGARVWEALLLSSVSKLDF 432
P R + ++ +S D
Sbjct: 377 GCPPDVRTFGVVVAGCMSAGDM 398
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 23/371 (6%)
Query: 81 EAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
+ YH ++ L+ F + S++ D + E +FIDL++ Y A R++ S+ +F
Sbjct: 84 DTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIF 143
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
+IP F + R ++ LN ++N + + L+ + F +
Sbjct: 144 LRIPDFGVKR---SVRSLNTLLN--VLIQNQRFDLVHAM--------------FKNSKES 184
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G + ++++L KK + A +L+++ S G+ P++V YT +L G + + D
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ + +E+L G PD TY V ++G CK ++ ME+ +P+ +TY +++
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
ALCK ++ R + EM + + + +ID L + EACGL + L
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIR 439
+++ I LC+ G V +A +L + +K P + L+ K + R
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAG--R 421
Query: 440 LVDQILNTPCK 450
L D + CK
Sbjct: 422 LWDDMYERKCK 432
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 163/348 (46%), Gaps = 22/348 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S P Y+ +I L++ + + S+ L I+ R + F I Y
Sbjct: 406 LLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR-GLKPDAVTFGAFILGY 464
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ + ++ F + M++ G + +++++ + +L
Sbjct: 465 SKTGKMTEAAKYFDE------------------MLDHGLMPNNPLYTVLINGHFKAGNLM 506
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E L + + LG + + I L+K +V +AL + +++K G+ PD+ Y+
Sbjct: 507 --EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 564
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G Q + KA EL DE+ + G+ P+++ YN ++GLCK +++ K+ M E G
Sbjct: 565 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 624
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+PD +TY+T++ CK + L EM KG+ + Y+ ++ G +GD+ +A
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 684
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L E L KG T S F+ I G C+ +++A +L ++M K + P
Sbjct: 685 NLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMP 731
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 8/265 (3%)
Query: 167 VDGKTCSLILSSV--------CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
+DG +CS + + C + +E ++ E++ G V + I K
Sbjct: 407 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 466
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
K+ +A ++M G+ P+ YT+++NG + ++A +F L LG++PDV T
Sbjct: 467 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT 526
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+ +I+GL K V+ +K+ + ++E G PDV TY++L+ CK E+ + EL EM
Sbjct: 527 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC 586
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KGI N+ Y+ ++DGL GDI A L + KGL S + I G C+ V
Sbjct: 587 LKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 646
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A L +M K V P + V+ AL+
Sbjct: 647 EAFSLFHEMPSKGVQPHSFVYNALV 671
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 133/306 (43%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EIL MI G + +T L++ C + ++ L + EM+K V Y +
Sbjct: 298 AAEILKGMITLGCKPNSRTFCLLIEGYCREHNMG--RALELLDEMEKRNLVPSAVSYGAM 355
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + + A +L +M G+KP++V Y+ ++ G + +A L D + G+
Sbjct: 356 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGV 415
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD++ YN I+ L K +E + ++ G KPD +T+ + K ++ +
Sbjct: 416 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 475
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC-------------------------- 366
EM G++ N Y+++I+G G+++EA
Sbjct: 476 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLL 535
Query: 367 --GLLEEALN-------KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G ++EAL KGL + I G C++G V KA EL +M K ++P
Sbjct: 536 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 595
Query: 418 VWEALL 423
++ AL+
Sbjct: 596 IYNALV 601
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 166/355 (46%), Gaps = 8/355 (2%)
Query: 100 SSVLDHI--EKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL 157
SS+LD + R + +F LI +Y ++ N+F+ I L
Sbjct: 138 SSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL 197
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
M G + T ++I + +C + ++ +L +EM+K G + +I +
Sbjct: 198 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT--FEEMQKTGLKPDYNACSALIDGFM 255
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
++ + + L I + M S GI +++ Y ++++G+ KA E+ ++ LG P+
Sbjct: 256 REGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSR 315
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
T+ + I G C+++N+ ++++ ME+ P ++Y ++ LC ++L+ +L+++M
Sbjct: 316 TFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM 375
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ G+ N+ YS +I G AS+G I EA LL+ G+ ++ I L + G +
Sbjct: 376 TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKM 435
Query: 398 RKALELLKQMADKDVSPGARVWEALLL--SSVSKLDFVNTSFIRLVDQIL--NTP 448
+A L ++ + + P A + A +L S K+ F ++D L N P
Sbjct: 436 EEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 490
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ A M G D CS ++ + D+ DE+L M G
Sbjct: 221 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI--DEVLRIKDVMVSCGIPIN 278
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I L K K+ A IL M + G KP+ + +++ G + + +A EL D
Sbjct: 279 LITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLD 338
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ LVP +Y INGLC ++ K++ M G KP+V+ Y+TL+
Sbjct: 339 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEG 398
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ R L+ M G+ ++ Y+ +I L+ G + EA L E +GL + F
Sbjct: 399 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 458
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G + +A + +M D + P ++ L+
Sbjct: 459 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 496
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 36/254 (14%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ +I K E V +A + ++M S G++P Y +++G + D KA LF E
Sbjct: 630 VTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 689
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L G + ++N I+G CK ++ ++ M PD +TY T++ CK +
Sbjct: 690 MLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 748
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDG----------------LASKG---------- 360
+ L KEM+ + ++++ TY+ ++ G + +KG
Sbjct: 749 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGL 808
Query: 361 ---------DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+++EA L +E + KG+ T+ ++ D I LC+R + +A +LL +M +
Sbjct: 809 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 868
Query: 412 VSPGARVWEALLLS 425
+ P L+ S
Sbjct: 869 LKPSLAACSTLVRS 882
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 140/316 (44%), Gaps = 29/316 (9%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y +I ++ + S+ H + + F++ L+ + ++
Sbjct: 626 EPDSVTYSTMIDGYCKSENVAEAFSLF-HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 684
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFC---------------------VDGKTCSLI 175
NLF ++ + GFA + + DG+C D T + +
Sbjct: 685 NLFREMLQ-----KGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 739
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ C+ + LL +EM++ V YT+++ K + + + +M +
Sbjct: 740 IDWHCKAGKMEEANLL--FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 797
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+KPD V Y +V+ +++ V+A +L DE++ G++ +++ I LCK+ ++
Sbjct: 798 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 857
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
K++ M ELG KP + +TL+++ + +++ + + +K G+V + T +++G
Sbjct: 858 SKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917
Query: 356 LASKGDIIEACGLLEE 371
+ D +A L+++
Sbjct: 918 NLNDTDSEDARNLIKQ 933
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 67/151 (44%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S E+ ++M G V Y VI + K++ + +A + +++ G+ + +
Sbjct: 784 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 843
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ + +ED +A +L DE+ LGL P + + + + ++ ++ ++ LG
Sbjct: 844 LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG 903
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEM 337
PD T L+ + R L+K++
Sbjct: 904 LVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + ++ G G L+++++C++ DL+ E + EM +LG + + +
Sbjct: 822 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT--EASKLLDEMGELGLKPSLAACSTL 879
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+RS + K+ +A + +KS G+ PD ++NG + D A L +L+
Sbjct: 880 VRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+ A E L+ M +G + T S + + C++ L E + F +M+++
Sbjct: 337 KFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ--EAIKFFVDMRRVALTPN 394
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
YT++I + K + +AL ++ ++ GIK ++V YT +L+G+ + +AEE+F
Sbjct: 395 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 454
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L G+ P+ TY ++G K +E ++ M+E KPD++ Y T+L LC
Sbjct: 455 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNES 514
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + L+ E+K GI N Y+ ++D G EA LLEE L+ GL +
Sbjct: 515 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYC 574
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ GLV++A+ +M++ + P V+ AL+
Sbjct: 575 ALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALV 612
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 155/340 (45%), Gaps = 20/340 (5%)
Query: 102 VLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFYKIPKFRI------------- 147
V D + N P F +F L + +++ F K+ KFR+
Sbjct: 170 VFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHR 229
Query: 148 -NRVG---FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
++VG + + M G T ++++ +C++ DL L F Q MK+ GF
Sbjct: 230 LSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL-FTQ-MKEAGFT 287
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y ++I K + + + I QMK PD++ Y ++N E KA E
Sbjct: 288 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 347
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E+ GL P+V TY+ +I+ CK+ ++ IK M + P+ TY +L+ A CK
Sbjct: 348 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 407
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
L +LV+E+ GI LN+ TY+ ++DGL +G + EA + LN G+
Sbjct: 408 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQET 467
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G + + A ++LK+M +K + P ++ +L
Sbjct: 468 YTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 507
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A E+ M+N G + +T + ++ + +++ + ++EMK+ ++
Sbjct: 444 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK--DILKEMKEKCIKPDLL 501
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ L + ++ +A ++ ++K GI + V YT +++ +A L +E+
Sbjct: 502 LYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 561
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L LGL+ TY I+GLCK V+ + M E+G +P+V Y L+ LCK
Sbjct: 562 LDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCF 621
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++L EM KG++ + Y+ +IDG G++ EA L + + G+ +
Sbjct: 622 EVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTAL 681
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GL G V+KA LL +M K V P V+ L+
Sbjct: 682 IWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 717
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 118/236 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + ++MK ++ Y +I K E++ A L++MK++G+KP++V Y+
Sbjct: 307 DECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTF 366
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ + +A + F ++ + L P+ +TY I+ CK N+ +K++ + + G
Sbjct: 367 IDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGI 426
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
K +V+TY LL LC+ + E+ + M G+ N +TY+ ++ G ++ A
Sbjct: 427 KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKD 486
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L+E K + ++ + GLC + +A L+ ++ + ++ A ++ L+
Sbjct: 487 ILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 542
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 2/241 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
IL +C + L +LL + E+K+ G V YT ++ + K + +AL +L +M
Sbjct: 506 ILWGLCNESRLEEAKLL--IGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 563
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+ V Y +++G+ +A F + +GL P+V Y ++GLCK N E
Sbjct: 564 LGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEV 623
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
K+ M + G PD I Y L+ K L L M G+ L+L Y+ +I
Sbjct: 624 AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIW 683
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL+ G + +A LL+E + KG+ ++ I G V +ALEL +MA + +
Sbjct: 684 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 743
Query: 415 G 415
G
Sbjct: 744 G 744
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 20/244 (8%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCV 167
K T I+ L+ Y + + +++ L ++ + A E+ C + DG C
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGL----IATEVTYCALIDGLCK 582
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
G E + M ++G + YT ++ L K A
Sbjct: 583 SGLV----------------QEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKK 626
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ ++M G+ PD + YT +++G + + +A L D ++ +G+ D++ Y I GL
Sbjct: 627 LFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLS 686
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
V+ ++ M G PD + Y L++ + +++ EL EM +G++ L
Sbjct: 687 HSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLS 746
Query: 348 TYSI 351
+++
Sbjct: 747 DHAV 750
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 152/286 (53%), Gaps = 4/286 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A L+ M+ G + T ++++ ++C + L +E +G V +M+ G V Y +
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRL--EEAVGVVGDMRGAGCAPNAVTYNTL 193
Query: 213 IRSLVKKEKVFDALGILNQMKSDG-IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+ + + ++ A +++ M+ +G KP++V + ++NG+ A ++FDE++ G
Sbjct: 194 VAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG 253
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L PDV +YN ++G CK + + + + M + G PDV+T+ +L+ A CK L +
Sbjct: 254 LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAV 313
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
LV +M+ +G+ +N T++ +IDG KG + +A +EE G+ ++ I G
Sbjct: 314 ALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGY 373
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
C+ G + A EL+++M K V P + + ++S K+ ++++F
Sbjct: 374 CKLGRMDLARELIREMEAKRVKPDVVTY-STIISGYCKVGNLDSAF 418
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 146/280 (52%), Gaps = 3/280 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
++ + + M G D T + ++ + C+ +L ++ + V +M++ G V +T +
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL--EQAVALVAQMRERGLRMNEVTFTAL 334
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I KK + DAL + +M+ GI+P +VCY ++NG A EL E+ +
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY+ I+G CK N+++ ++ M + G PD ITY++L++ LC+ + LN E
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L + M G+ + TY+ +IDG +G++ +A L +E + KG+ + I GL
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ ++A LL ++ +D P ++AL+L SK +F
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALML-CCSKAEF 553
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 39/322 (12%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F LI A + +V L ++ + R+N V F I DGFC G
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI------DGFCKKGFL----- 344
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
D+ L V+EM+K G +V Y +I K ++ A ++ +M++
Sbjct: 345 -----------DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+KPD+V Y+ +++G + A +L ++L G++PD TY+ I GLC++ +
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M +LG +PD TY TL+ CK + + L EM KG++ ++ TYS++I+GL
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Query: 357 ASKGDIIEACGLLEEALNKG------------LCTQSSMFDETIC---GLCQRGLVRKAL 401
+ EA LL + ++ LC + F + G C +GL+++A
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 573
Query: 402 ELLKQMADKDVSPGARVWEALL 423
++ + M D++ V+ L+
Sbjct: 574 KVYQSMLDRNWKLDGSVYSILI 595
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 140/312 (44%), Gaps = 38/312 (12%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GM 206
R+ A+ ++ M G + T + ++++ C +L E + V M++ G +
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV--VSLMREEGNAKPNL 223
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V + +++ L K ++ A + ++M +G+ PD+V Y +L+G ++ +F E
Sbjct: 224 VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK------------------ 308
+ GLVPDV T+ I+ CK N+E + ++A M E G +
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 309 -----------------PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
P V+ YN L+ CK+ ++ REL++EM+ K + ++ TYS
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I G G++ A L ++ L KG+ + + I GLC+ + A EL + M
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 412 VSPGARVWEALL 423
V P + L+
Sbjct: 464 VQPDEFTYTTLI 475
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 54/280 (19%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A E++ M D T S I+S C+ +L D Q+M K G
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL--DSAFQLNQKMLKKGVLPD 432
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+++IR L +++++ DA + M G++PD YT +++G + + KA L D
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G++PDV TY+V INGL K + +++ + PD I Y+ L+ C
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC-CSKA 551
Query: 326 ELNRLRELVKEMKWKGIV----------------LNLQTYSIMIDG-------------- 355
E + L+K KG++ L+ YSI+I G
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611
Query: 356 ---------------------LASKGDIIEACGLLEEALN 374
L +G ++EA +++ L
Sbjct: 612 KQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT 651
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 177/373 (47%), Gaps = 24/373 (6%)
Query: 77 EPPPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQ 133
PPP + F ++ +L +N ++ + S+ E N TP+ + LI +
Sbjct: 56 RPPPPTFLFNNILSSLVKNKRYPTVISLFKQFE--PNGITPDLCTLSILINCFCHLTHIT 113
Query: 134 DSVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCVDGKTCSLIL 176
+ ++F I K + N + A+ + ++ GF +D + ++
Sbjct: 114 FAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLI 173
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C+ + + L +++++ +V YT +I L K + + DA + ++M G
Sbjct: 174 NGLCKAGETKAVARL--LRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKG 231
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I P++ YT +++G + + +A L +E+ + + PDVYT+N+ I+ L K+ ++ +
Sbjct: 232 ISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAM 291
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ M+ P+++TY +L+ LCK L R L K+MK +GI N+ +Y+I++D L
Sbjct: 292 SLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDAL 351
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G + A + L KG ++ I GLC+ GL ++L +M K P A
Sbjct: 352 CKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNA 411
Query: 417 RVWEALLLSSVSK 429
++ ++ + + K
Sbjct: 412 ITFKTIICALLEK 424
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 117/232 (50%), Gaps = 4/232 (1%)
Query: 185 LSSDELLG----FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
L ++LLG EM G + YT +I + +A +LN+MK I PD
Sbjct: 211 LCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPD 270
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+ + ++++ + + +A LF+E+ + P++ TY I+GLCK +++E I +
Sbjct: 271 VYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCK 330
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M+E G +P+V +Y LL ALCK L ++ + + KG LN++TY++MI+GL G
Sbjct: 331 KMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAG 390
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ L + KG + F IC L ++ KA + L++M + +
Sbjct: 391 LFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +LN M D T ++++ ++ ++ + DE + +EMK +V YT++
Sbjct: 255 AFSLLNEMKLKNINPDVYTFNILIDALAKEGKI--DEAMSLFEEMKHKNMFPNIVTYTSL 312
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K + A+ + +MK GI+P++ YT++L+ + A++ F LLV G
Sbjct: 313 IDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGY 372
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+V TYNV INGLCK + + + ME G P+ IT+ T++ AL + E ++ +
Sbjct: 373 HLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEK 432
Query: 333 LVKEMKWKGIV 343
++EM +G++
Sbjct: 433 FLREMIARGLL 443
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 2/228 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+G A ++ + MI G + T + ++ C +L E + EMK + +
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLK--EAFSLLNEMKLKNINPDVYTF 274
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I +L K+ K+ +A+ + +MK + P+IV YT +++G+ +A L ++
Sbjct: 275 NILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE 334
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ P+VY+Y + ++ LCK +E + + G +V TYN ++ LCK
Sbjct: 335 QGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGD 394
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ +L +M+ KG + N T+ +I L K + +A L E + +GL
Sbjct: 395 VMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 140/281 (49%), Gaps = 5/281 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK--LGFC 203
+ RV A+ +L MI G+C D T S++++ +C+ + E F+Q M +
Sbjct: 386 KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQ--EAQEFLQGMDRKISSRS 443
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEE 262
Y +++ SL K +KV A I + M S+ PD+V Y+++++G ++ +AE+
Sbjct: 444 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEK 503
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
L+ +++ L VP+V TYN ++NGL ++ + + M G PDVITY+TL+
Sbjct: 504 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFS 563
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
R+ ++ EL + M +G N TY+ ++ GL + EA L + + +G
Sbjct: 564 LARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRV 623
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G C G + +A+E+ +M K P + LL
Sbjct: 624 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 664
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 139/282 (49%), Gaps = 4/282 (1%)
Query: 146 RINRVGFAIEILNCMIND-GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+ +V A I + M+++ F D + S+++ C+ +L E L ++M L
Sbjct: 458 KAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKL--YKQMIDLNCVP 515
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y + L++K ++ DA G+ +M + G PD++ Y+ +++G + + +A ELF
Sbjct: 516 NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELF 575
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ ++ G P+ TYN ++GLCK++ + ++ M E G PD +TY TLL C V
Sbjct: 576 ETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNV 635
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ + E+ EM KG ++ Y+ ++ G G EA L + +++ +
Sbjct: 636 GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSH 695
Query: 385 DETICGLCQRGLVRKALELLKQMA-DKDVSPGARVWEALLLS 425
+ I GL + + A+E+ ++M D SP + +L+
Sbjct: 696 NIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFG 737
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ MI+ G + T + +L +C++ DE ++M + G V YT +
Sbjct: 571 AHELFETMISRGCRPNAVTYNCLLHGLCKES--KPDEAHELFRKMVERGCDPDRVTYTTL 628
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K+ A+ + ++M S G PD+V Y +L G +A++LF ++
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEE-LGSKPDVITYNTLLQALCKVRELNRLR 331
PD ++N+ I+GL K ++ +++ ME+ G PD++TYN+L+ LC + L+
Sbjct: 689 KPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAM 748
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGL 356
++ KE+ + + ++++++ +
Sbjct: 749 KVFKEIDRLKLSPDPHAFNVLLEAI 773
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 7/294 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ M+ G +G T ++++ S C +R+ SDE + F EM GF Y V
Sbjct: 148 AGQVFEKMVAQGVVPNGFTYAVLVQSSCYERN--SDEAVRFFGEMVDKGFKPSSTLYQKV 205
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
L K + + + + +++ +L ++Q+ ++A +LF ++ G
Sbjct: 206 TECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGC 265
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP-DVITYNTLLQALCKVRELNRLR 331
PD Y+ + CK N++ K+ M P + + + L LCK ++ +
Sbjct: 266 KPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAF 325
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E + M+ + + + Y ++I L G I +A E + + S I L
Sbjct: 326 EACRTMQ-ESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQEL 384
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS--FIRLVDQ 443
C+ G V AL LL+ M + P ++L++ + K D + + F++ +D+
Sbjct: 385 CKAGRVDSALSLLETMIKRGYCPDM-ATHSMLINELCKADKIQEAQEFLQGMDR 437
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 98/219 (44%), Gaps = 10/219 (4%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+AL +++ K D+ Y +L+ +I D +A ++F++++ G+VP+ +TY V +
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL---LQALCKVRELNRL--RELVKEMK 338
C + N + ++ M + G KP Y + L+A K E +R+ R+L K
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKR-- 229
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+ + + ++ + IEA L + G ++++ + C+ +
Sbjct: 230 ---VAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLD 286
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+A +L +MA + +P V LS + K + +F
Sbjct: 287 EAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAF 325
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 115/275 (41%), Gaps = 7/275 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLGFCFGMVDYTN 211
A ++ M+ G D S ++ + C+ +L DE EM + V +T
Sbjct: 253 ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL--DEAFKLFLEMAVESKAPLNNVAWTA 310
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+ L K K+ A M+ + + Y M++ +I KAEE E+
Sbjct: 311 FLSGLCKSGKIEQAFEACRTMQ-ESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRN 369
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P T + I LCK V++ + ++ M + G PD+ T++ L+ LCK ++ +
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ 429
Query: 332 ELVKEMKWK--GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN-KGLCTQSSMFDETI 388
E ++ M K + +Y+ +++ L + +A + ++ + + I
Sbjct: 430 EFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILI 489
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ + +A +L KQM D + P + A L
Sbjct: 490 DGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 524
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 145/281 (51%), Gaps = 4/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ +L+ M+ G D T +++L + C+ R + + + M+ G V Y +
Sbjct: 26 ALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYR--QAMELIDLMRAEGCTPNNVTYNVL 83
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + + V DAL +L + S G KP V Y VL G+ E + A+EL E+L
Sbjct: 84 MDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENC 143
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ T+NV I LC++ ++ I+++ M + G +++TYN ++ LC+ R ++
Sbjct: 144 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMG 203
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ +MK G ++ TY+ ++ GL S ++A L++ G + F+ I LC
Sbjct: 204 LLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLC 263
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
Q+GL+ A+E+ KQM DK +P + + ++ L+ +KLD
Sbjct: 264 QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 163/338 (48%), Gaps = 21/338 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y+ +I TL E Q D SVLD + R P+ + ++
Sbjct: 4 QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGC--APDVVTYNI-------------- 47
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
L K R R A+E+++ M +G + T ++++ +C + D+ D+ L ++
Sbjct: 48 -LLEATCKGRGYRQ--AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDV--DDALELLRN 102
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G V+Y V++ L E+ DA ++ +M + P+ + +V+ + +
Sbjct: 103 LPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGL 162
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A +L +++ G ++ TYN INGLC+Q NV+ + +++ M+ G KPD++TYNT
Sbjct: 163 LQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNT 222
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL+ LC EL+ M G + + T++ +I L KG +++A + ++ +KG
Sbjct: 223 LLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG 282
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
S + I GL + + +ALEL +M K +P
Sbjct: 283 CTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP 320
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 117/241 (48%), Gaps = 2/241 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I +L ++ +V DAL +L+ M G PD+V Y ++L Y +A EL D +
Sbjct: 10 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 69
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P+ TYNV ++G+C + +V+ ++++ + G KP + YNT+L+ LC
Sbjct: 70 AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 129
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
ELV EM + N T++++I L KG + +A LLE+ G ++ I
Sbjct: 130 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 189
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTP 448
GLC++ V A+ LL +M P + LL S +V+ L+D +
Sbjct: 190 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE--ELMDNMTQNG 247
Query: 449 C 449
C
Sbjct: 248 C 248
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 158/359 (44%), Gaps = 23/359 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + + C+P Y+ V+K L ++ D ++ + REN E F +I +
Sbjct: 99 LLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM-LRENCPPNEATFNVVIYSL 157
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
Q ++ L K+ K G + T + I++ +CEQR++
Sbjct: 158 CRKGLLQQAIQLLEKMSKH------------------GCTANIVTYNAIINGLCEQRNV- 198
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D +G + +MK G +V Y +++ L + DA +++ M +G PD V +
Sbjct: 199 -DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNT 257
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ + + V A E+F ++ G P+ TY+ I+GL K ++ +++ M G
Sbjct: 258 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 317
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD I Y L + L + + V++++ GI + Y+ ++ GL G A
Sbjct: 318 FNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 376
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV-WEALLL 424
++ ++ G + I GL G + +A ELL ++ +DV + + EALLL
Sbjct: 377 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEALLL 435
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P+ YTYN I+ LC++ V + ++ M G PDV+TYN LL+A CK R + EL
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ M+ +G N TY++++DG+ +GD+ +A LL + G + ++ + GLC
Sbjct: 65 IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
A EL+ +M ++ P + ++ S K
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRK 160
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 94/187 (50%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P+ Y +++ + + A + D++L G PDV TYN+ + CK +
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++I M G P+ +TYN L+ +C +++ EL++ + G + Y+ ++ GL
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
S +A L+ E L + + F+ I LC++GL+++A++LL++M+ +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 417 RVWEALL 423
+ A++
Sbjct: 183 VTYNAII 189
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A+ + I DGF D T + ++ +C+ + L + M + G
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG--HALKVMDVMVQEGHDPD 320
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y V+ L K ++ +A GILNQM G PDI + ++ + +A +L
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ V G+ PDVYT+N+ IN LCK + +++ M+ G PD +TYNTL+ LC +
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + +L+K+M+ G + TY+ +IDGL K I EA + ++ +G+ + F+
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 500
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ + A EL+ QM + + P + ++L
Sbjct: 501 TLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 188/439 (42%), Gaps = 60/439 (13%)
Query: 22 LSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPE 81
+ P + +W + +Q LT ++ P L L + + + P PE
Sbjct: 21 VGPLRPRWRASRHGPLRAAGQEQLLTA-----LREQPDPDAALRMLNAALARDDFAPGPE 75
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I+ L D+ VL +RE + + + +Y F D+V+L
Sbjct: 76 VYEEIIRKLGAVGAL-DLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILN 134
Query: 142 I--PKFRINR-------------VGFAIEILNCMIND----GFCVDGKTCSLILSSVCE- 181
P F I G +++L + ++ G D T + ++ ++C
Sbjct: 135 QLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194
Query: 182 --------------QRDLSSDE------LLGFVQE------------MKKLGFCFGMVDY 209
R ++ DE + GFV+E M ++G V
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV-KAEELFDELL 268
+I K +V DALG + Q +DG +PD + Y +NG + Q D+V A ++ D ++
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG-LCQNDHVGHALKVMDVMV 313
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PDV+TYN+ +N LCK +E ++ M + G PD+ T+NTL+ ALC L
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L +++ KG+ ++ T++I+I+ L GD A L EE N G ++ I
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433
Query: 389 CGLCQRGLVRKALELLKQM 407
LC G + KAL+LLK M
Sbjct: 434 DNLCSLGKLGKALDLLKDM 452
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 135/260 (51%), Gaps = 2/260 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ VG A+++++ M+ +G D T +++++ +C+ L +E G + +M G +
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL--EEAKGILNQMVDRGCLPDIT 357
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I +L ++ +AL + Q+ G+ PD+ + +++N + D A LF+E+
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G PD TYN I+ LC + + ++ ME G ITYNT++ LCK +
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
E+ +M +GI N T++ +IDGL I +A L+ + +++GL + ++
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 537
Query: 388 ICGLCQRGLVRKALELLKQM 407
+ C++G ++KA ++L+ M
Sbjct: 538 LTHYCKQGDIKKAADILETM 557
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 161/345 (46%), Gaps = 23/345 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDS 135
+P Y+ V+ L +N Q + +L+ + R P+ F LI +R +++
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL--PDITTFNTLIAALCTGNRLEEA 375
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
++L ++ G D T +++++++C+ D L +
Sbjct: 376 LDLARQVTV------------------KGVSPDVYTFNILINALCKVGD--PHLALRLFE 415
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EMK G V Y +I +L K+ AL +L M+S G + Y +++G+ +
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 475
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+AEE+FD++ + G+ + T+N I+GLCK ++ ++I M G +P+ ITYN
Sbjct: 476 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 535
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++L CK ++ + ++++ M G +++ TY +I+GL G A +L K
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
G+ ++ + L +R +R AL L ++MA+ P A ++
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A+ + I DGF D T + ++ +C+ + L + M + G
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG--HALKVMDVMVQEGHDPD 320
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y V+ L K ++ +A GILNQM G PDI + ++ + +A +L
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ V G+ PDVYT+N+ IN LCK + +++ M+ G PD +TYNTL+ LC +
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + +L+K+M+ G + TY+ +IDGL K I EA + ++ +G+ + F+
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 500
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ + A EL+ QM + + P + ++L
Sbjct: 501 TLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 538
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 188/439 (42%), Gaps = 60/439 (13%)
Query: 22 LSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPE 81
+ P + +W + +Q LT ++ P L L + + + P PE
Sbjct: 21 VGPLRPRWRASRHGPLRAAGQEQLLTA-----LREQPDPDAALRMLNAALARDDFAPGPE 75
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I+ L D+ VL +RE + + + +Y F D+V+L
Sbjct: 76 VYEEIIRKLGAVGAL-DLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILN 134
Query: 142 I--PKFRINR-------------VGFAIEILNCMIND----GFCVDGKTCSLILSSVCE- 181
P F I G +++L + ++ G D T + ++ ++C
Sbjct: 135 QLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194
Query: 182 --------------QRDLSSDE------LLGFVQE------------MKKLGFCFGMVDY 209
R ++ DE + GFV+E M ++G V
Sbjct: 195 HQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV-KAEELFDELL 268
+I K +V DALG + Q +DG +PD + Y +NG + Q D+V A ++ D ++
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG-LCQNDHVGHALKVMDVMV 313
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PDV+TYN+ +N LCK +E ++ M + G PD+ T+NTL+ ALC L
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L +++ KG+ ++ T++I+I+ L GD A L EE N G ++ I
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433
Query: 389 CGLCQRGLVRKALELLKQM 407
LC G + KAL+LLK M
Sbjct: 434 DNLCSLGKLGKALDLLKDM 452
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 135/260 (51%), Gaps = 2/260 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ VG A+++++ M+ +G D T +++++ +C+ L +E G + +M G +
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL--EEAKGILNQMVDRGCLPDIT 357
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I +L ++ +AL + Q+ G+ PD+ + +++N + D A LF+E+
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G PD TYN I+ LC + + ++ ME G ITYNT++ LCK +
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
E+ +M +GI N T++ +IDGL I +A L+ + +++GL + ++
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 537
Query: 388 ICGLCQRGLVRKALELLKQM 407
+ C++G ++KA ++L+ M
Sbjct: 538 LTHYCKQGDIKKAADILETM 557
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 161/345 (46%), Gaps = 23/345 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDS 135
+P Y+ V+ L +N Q + +L+ + R P+ F LI +R +++
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL--PDITTFNTLIAALCTGNRLEEA 375
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
++L ++ G D T +++++++C+ D L +
Sbjct: 376 LDLARQVTV------------------KGVSPDVYTFNILINALCKVGD--PHLALRLFE 415
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EMK G V Y +I +L K+ AL +L M+S G + Y +++G+ +
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 475
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+AEE+FD++ + G+ + T+N I+GLCK ++ ++I M G +P+ ITYN
Sbjct: 476 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 535
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++L CK ++ + ++++ M G +++ TY +I+GL G A +L K
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
G+ ++ + L +R +R AL L ++MA+ P A ++
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 164/367 (44%), Gaps = 24/367 (6%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P A Y+ VI + ++ + +R ++ + +I + R ++
Sbjct: 141 PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEA 200
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK--TCSLILSSVCEQ----------- 182
V +F ++ V + N +I G+C GK T L + E+
Sbjct: 201 VKVFDEM--LTKGEVKPEAVMYNALIG-GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 257
Query: 183 ------RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
D E V+EM G + Y +I K+ V AL I M G
Sbjct: 258 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 317
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++ +V YT ++ + + + ++LFDE + G+ PD+ YN IN N++
Sbjct: 318 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 377
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ ME+ PD +TYNTL++ LC + ++ R+L+ EM +GI +L TY+ +I G
Sbjct: 378 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 437
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ KGD+ +A + E +NKG ++ I GLC+ G A ++K+M + ++P
Sbjct: 438 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 497
Query: 417 RVWEALL 423
+ +L+
Sbjct: 498 STYISLI 504
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 6/301 (1%)
Query: 148 NRVGFAIEILNCMI-NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG- 205
RV A++I+ M G + T ++S C+ + DE + EM G
Sbjct: 159 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV--DEAVKVFDEMLTKGEVKPE 216
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I + K+ AL ++M G+ + Y ++++ + + +A EL +
Sbjct: 217 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 276
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL PDV+TYN+ ING CK+ NV+ +++ M G + V+TY L+ AL K
Sbjct: 277 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 336
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L E +GI +L Y+ +I+ ++ G+I A ++ E K + ++
Sbjct: 337 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 396
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ GLC G V +A +L+ +M ++ + P + L+ K D + +R+ ++++
Sbjct: 397 TLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA--LRIRNEMM 454
Query: 446 N 446
N
Sbjct: 455 N 455
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 2/248 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F R A E++ M G D T +++++ C++ ++ + L + M + G
Sbjct: 263 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK--KALEIFENMSRRGVRA 320
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V YT +I +L KK +V + + ++ GI+PD+V Y ++N + +A E+
Sbjct: 321 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 380
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PD TYN + GLC V+ K+I M E G +PD++TYNTL+
Sbjct: 381 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 440
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ + EM KG L TY+ +I GL G +A +++E + G+ S +
Sbjct: 441 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 500
Query: 385 DETICGLC 392
I GL
Sbjct: 501 ISLIEGLT 508
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
LF ++ L L T+N+ + LC ++++ M +P+ +TYNT++ C
Sbjct: 101 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFC 156
Query: 323 KVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG-LCTQ 380
+ ++++EM+ + GI N TY +I G G + EA + +E L KG + +
Sbjct: 157 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 216
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ M++ I G C +G + AL +M ++ V+
Sbjct: 217 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 249
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 159/348 (45%), Gaps = 21/348 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S NC+P Y +I +L ++ Q + ++ + + F + L+
Sbjct: 192 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG-QGISPDIFTYTSLVHAL 250
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ ++ L LN M+N D S ++ ++C++ ++
Sbjct: 251 CNLCEWKHVTTL------------------LNQMVNSKILPDVVIFSTVVDALCKEGKVT 292
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E V M + G +V YT ++ + ++ +A+ + + M G PD++ YT
Sbjct: 293 --EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT 350
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG KA LF+E+ +PD TYN + GLC ++ I + M G
Sbjct: 351 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD++TY+ LL +LCK R L L+K ++ + ++Q Y+I+IDG+ G++ A
Sbjct: 411 QMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 470
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L +KGL ++ I GLC+RGL+ +A +L +M D SP
Sbjct: 471 DLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 518
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 191/421 (45%), Gaps = 66/421 (15%)
Query: 62 HILSSLLHSFS-IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
+ L L SF+ + + PPP F K L ++ S+VL + ++F P ++
Sbjct: 44 NTLDDALSSFNRLLHMHPPPSIVDFA-KLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT 102
Query: 121 --DLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMI 161
LI ++ +R + ++ KI K ++G A+ + + MI
Sbjct: 103 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 162
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
++GF + T +++ +C+ + S+ + ++ M++ +V YT++I SL K +
Sbjct: 163 DEGFQPNVVTYGTLINGLCKVGNTSA--AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 220
Query: 222 VFDALGILNQMKSDGIKPDIVCYT-----------------------------------M 246
V +A + +QM GI PDI YT
Sbjct: 221 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 280
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++ + + +A E+ D ++ G+ PDV TY ++G C Q+ ++ +K+ M G
Sbjct: 281 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 340
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PDVI+Y TL+ CK+ ++++ L +EM K + + +TY+ ++ GL G + +A
Sbjct: 341 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAI 400
Query: 367 GLLEEALNKG----LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
L E + +G L T S + D LC+ + +A+ LLK + +++P +V+ +
Sbjct: 401 ALFHEMVARGQMPDLVTYSILLDS----LCKNRHLEEAMALLKAIEASNLNPDIQVYNII 456
Query: 423 L 423
+
Sbjct: 457 I 457
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 161/315 (51%), Gaps = 22/315 (6%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC-SL 174
+F LI + + +++V L +K+ IN + IL D FC +GK +
Sbjct: 245 DFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILV----DAFCKEGKVKEAK 300
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ V ++D+ D ++ + M G+C +++ + K + +FD+ M S
Sbjct: 301 MMLGVTMKKDIILD-VVTYNSLMD--GYC--------LVKEINKAKDIFDS------MAS 343
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+ ++ YT ++NG+ + +A LF+E+ ++P+V TYN I+GL K +
Sbjct: 344 RGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISC 403
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+K++ M + G P++ITYN++L ALCK +++ L+ +K +GI ++ TY+++I
Sbjct: 404 VLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIK 463
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL G + +A + E+ L KG + I G C +GL AL LL +M D P
Sbjct: 464 GLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIP 523
Query: 415 GARVWEALLLSSVSK 429
A+ +E ++LS K
Sbjct: 524 NAKTYEIVILSLFEK 538
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 153/320 (47%), Gaps = 13/320 (4%)
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+D F +N F + +N + F++ ++ GF + T + ++ +C + +
Sbjct: 103 SDFFTFNILINCF---SQLGLNSLSFSV--FGKILKKGFDPNAITFNTLIKGLCLKGHIH 157
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ L F ++ GF V Y +I L K ++ AL +L ++ ++P+ V Y M
Sbjct: 158 --QALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 215
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ + + A +L+ +++ + PD +T N I G C ++ + ++ M
Sbjct: 216 IIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILEN 275
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P + T++ L+ A CK ++ + ++ K I+L++ TY+ ++DG +I +A
Sbjct: 276 INPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAK 335
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--L 424
+ + ++G+ + I GLC+ +V +A+ L ++M + + P + +L+ L
Sbjct: 336 DIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGL 395
Query: 425 SSVSKLDFVNTSFIRLVDQI 444
+ K+ V ++LVD++
Sbjct: 396 GKLGKISCV----LKLVDEM 411
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 2/236 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ + A +I + M + G + ++ + +++ +C+ + + DE + +EM+ +
Sbjct: 328 VKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMV--DEAVNLFEEMRCRKIIPNV 385
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K K+ L ++++M G P+I+ Y +L+ + KA L
Sbjct: 386 VTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTN 445
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L G+ PD+YTY V I GLC+ +E K+ + G DV TY ++Q C
Sbjct: 446 LKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGL 505
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ L+ +M+ G + N +TY I+I L K + A LL E + +GL + S
Sbjct: 506 FDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKS 561
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ +N GF VD +T + +L +CE L DE +E+ G V Y +
Sbjct: 478 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL--DEAFRIQKEILGRGCVMDRVSYNTL 535
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+K+ +A L++M G+KPD Y++++ G+ +A + +D+ G+
Sbjct: 536 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 595
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDVYTY+V I+G CK E G + M +P+ + YN L++A C+ L+ E
Sbjct: 596 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 655
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++MK KGI N TY+ +I G++ + EA L EE +GL + I G
Sbjct: 656 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 715
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + K LL++M K+V P + ++
Sbjct: 716 KLGQMVKVECLLREMHSKNVHPNKITYTVMI 746
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 134/281 (47%), Gaps = 5/281 (1%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGF 202
+F+ + A+++ + N G TC+++L+S+ + E V + G
Sbjct: 190 QFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GV 245
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ +T I + K KV +A+ + ++M+ G+ P++V + V++G+ + Y +A
Sbjct: 246 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 305
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++++ G+ P + TY++ + GL + + ++ M + G P+VI YN L+ +
Sbjct: 306 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 365
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ LN+ E+ M KG+ L TY+ +I G G A LL+E L+ G
Sbjct: 366 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 425
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F IC LC + AL + +M +++SPG + L+
Sbjct: 426 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 466
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 23/348 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y ++K L + D VL + K+ F ++ +LI ++ +A
Sbjct: 316 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFIEAGSLNK-- 372
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
AIEI + M++ G + T + ++ C+ + E L ++E
Sbjct: 373 ----------------AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL--LKE 414
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
M +GF +T+VI L+ +FD AL + +M + P T +++G+
Sbjct: 415 MLSIGFNVNQGSFTSVI-CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 473
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ KA EL+ + L G V D T N ++GLC+ ++ ++ + G D ++YN
Sbjct: 474 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 533
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ C ++L+ + EM +G+ + TYSI+I GL + + EA ++
Sbjct: 534 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 593
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + I G C+ + E +M K+V P V+ L+
Sbjct: 594 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 641
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 128/296 (43%), Gaps = 24/296 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSL 174
++F I + + +++V LF K+ + + N V F I DG + G+
Sbjct: 250 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI------DGLGMCGRY--- 300
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
DE F ++M + G ++ Y+ +++ L + +++ DA +L +M
Sbjct: 301 -------------DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 347
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P+++ Y +++ I KA E+ D ++ GL TYN I G CK +
Sbjct: 348 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 407
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+++ M +G + ++ +++ LC + V EM + + + +I
Sbjct: 408 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 467
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
GL G +A L + LNKG + + + GLC+ G + +A + K++ +
Sbjct: 468 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 523
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 179/372 (48%), Gaps = 29/372 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P A+ F+I L ++ + D + D + P+ + + TY +
Sbjct: 283 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAM--------PQNGVVPSVMTY-------N 327
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
++ + Y ++ R+ A++I M +G D T + ++ +C+Q+ ++ELL
Sbjct: 328 AMIVGYS----KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELL--- 380
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
K GF +V +TN+I EK DAL + N+M S K D+ + ++N +I +
Sbjct: 381 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 440
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A+EL +E+ GLVP+V TY I+G CK V+ ++++ ME G +P+ TY
Sbjct: 441 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 500
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N+L+ L K ++L++ L+ +M+ GI+ N+ TY+ ++ G + D A L E
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK---LD 431
GL + LC+ G +A + + K V+ +V+ L+ SK D
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVAL-TKVYYTTLIDGFSKAGNTD 616
Query: 432 FVNTSFIRLVDQ 443
F T R++D+
Sbjct: 617 FAATLIERMIDE 628
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 169/381 (44%), Gaps = 37/381 (9%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
C+P Y+ ++ L ++ + ++L ++K + P I + L++ D H F
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK--DGIIPNVITYTTLLQGQCDEHDFD 549
Query: 134 DSVNLF--------------YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
++ LF Y + + + G A E + ++ G + + ++
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 609
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
+ + +D ++ M G Y+ ++ +L K++++ +AL IL+QM GIK
Sbjct: 610 SKAGN--TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
I YT++++ ++ + + A+ +++E+ G P TY V+IN CK+ +E +I
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
ME G PDV+TYN L+ + ++R +K M N TY +++ L K
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLL-K 786
Query: 360 GDI-----IEACG------------LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
G++ ++ G LLE + GL + + I G C+ G + +A
Sbjct: 787 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 846
Query: 403 LLKQMADKDVSPGARVWEALL 423
LL M K +SP ++ L+
Sbjct: 847 LLDHMCGKGLSPNEDIYTLLI 867
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 18/297 (6%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
FA ++ MI++G D T S++L ++C+Q+ L +E L + +M G + YT
Sbjct: 617 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL--NEALPILDQMSLRGIKCTIFAYTI 674
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I ++++ K A + N+M S G KP YT+ +N + AE+L ++ G
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK-----VR- 325
+ PDV TYN+ I+G ++ + M +P+ TY LL+ L K VR
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794
Query: 326 ----------ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
EL+ +L++ M G+ + TYS +I G G + EAC LL+ K
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
GL ++ I C KAL + M++ P + L++ ++ DF
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDF 911
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 145/349 (41%), Gaps = 67/349 (19%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE---------------- 189
R + + + + ++ DG D T + ++ S C++ DL++
Sbjct: 160 RFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETF 219
Query: 190 -----LLGFVQ--EMKKLGFCFGMV----------DYTNVIRSLVKKEKVFDALGILNQM 232
+LG+ + E++K + F M+ YT +I+ L + + V +AL + M
Sbjct: 220 TCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMM 279
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K DG P++ +T +++G+ A LFD + G+VP V TYN I G K +
Sbjct: 280 KRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRM 339
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALC--KVRELNR-LRELVKE------------- 336
+K+ ME+ G PD TYNTL+ LC K E L VKE
Sbjct: 340 NDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLI 399
Query: 337 --------------MKWKGIV----LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
MK K + L+LQ + +I+ L K + EA LL E GL
Sbjct: 400 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLV 459
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ I G C+ G V ALE+LK M P A + +L+ V
Sbjct: 460 PNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 159/370 (42%), Gaps = 28/370 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y+ +I L + Q + + L + +E F F +LI Y A +F D
Sbjct: 353 GCHPDDWTYNTLIYGLCD--QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDD 410
Query: 135 SVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
++ + K+ + +R+ A E+LN + +G + T + I+
Sbjct: 411 ALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIID 470
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
C+ + D L ++ M++ G Y +++ LVK +K+ A+ +L +M+ DGI
Sbjct: 471 GYCKSGKV--DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P+++ YT +L G + D+ A LF+ + GL PD + Y V + LCK E
Sbjct: 529 IPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS 588
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
I G + Y TL+ K + L++ M +G + TYS+++ L
Sbjct: 589 FIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 645
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETIC--GLCQRGLVRKALELLKQMADKDVSPG 415
+ + EA +L++ +G+ + ++F TI + + G A + +M P
Sbjct: 646 KQKRLNEALPILDQMSLRGI--KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 703
Query: 416 ARVWEALLLS 425
A + + S
Sbjct: 704 ATTYTVFINS 713
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +RSL + + + +Q+ DG+ PD V Y ++ + D A F LL
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P+ +T N + G C+ + + M +G + + +Y L+Q LC+ + +
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L MK G N++ ++ +I GL G + +A L + G+ ++ I
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + G + AL++ + M P + L+
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 365
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 1/214 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA+ + + S + CY L + + ++ +L+ GL+PD TYN I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
CK+ ++ + + E G +P+ T N L+ C+ EL + L M G
Sbjct: 191 KSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N +Y+I+I GL + EA L G F I GLC+ G V A L
Sbjct: 251 RNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
M V P + A+++ SKL +N +
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIV-GYSKLGRMNDAL 343
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 133/356 (37%), Gaps = 45/356 (12%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y ++ L + + + +LD + R + F + LI
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR-GIKCTIFAYTILID---------- 677
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
R + A + N M + G T ++ ++S C++ L E L +
Sbjct: 678 --------EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDL--I 727
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+M++ G +V Y +I + A L +M +P+ Y ++L ++
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 787
Query: 255 E-DYVKA---------------EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
YV++ +L + ++ GL P V TY+ I G CK +E +
Sbjct: 788 NLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 847
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M G P+ Y L++ C + + V M G L++Y +++ GL +
Sbjct: 848 LDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 907
Query: 359 KGDIIEA----CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+GD + C LLE N + D GL + G V ++L M +
Sbjct: 908 EGDFEKVKSLFCDLLELGYNHDEVAWKILND----GLLKAGYVDICFQMLSIMEKR 959
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +M G+ P + Y+ ++ G +A L D + GL P+ Y + I C
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
E + ++ M E G +P + +Y L+ LC + +++ L ++ G +
Sbjct: 872 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 931
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ I+ DGL G ++ C + + K C SS
Sbjct: 932 AWKILNDGLLKAG-YVDICFQMLSIMEKRYCCISS 965
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 75/162 (46%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
++ M K G + Y+++I K ++ +A +L+ M G+ P+ YT+++
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ + KA + G P + +Y + + GLC + + E + + ELG D +
Sbjct: 872 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 931
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ L L K ++ +++ M+ + ++ QTY+++ +
Sbjct: 932 AWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 973
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 174/373 (46%), Gaps = 24/373 (6%)
Query: 77 EPPPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQ 133
PPP +HF ++ +L +N + + S+ + N TP ++ LI +
Sbjct: 88 RPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQ--SNGVTPNLCTLNILINCFCHLAHIT 145
Query: 134 DSVNLFYKIPK-----------FRINRVGFAIEILNCM------INDGFCVDGKTCSLIL 176
+ ++F I K I + F EI + + GF +D + ++
Sbjct: 146 FAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLI 205
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C+ + + L +++++ +V YT +I L K ++V DA + ++M G
Sbjct: 206 NGLCKAGETKAVARL--LRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKG 263
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I P++ Y ++ G + + +A L +E+ + + PDVYT+N+ I+ L K+ ++ I
Sbjct: 264 ISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAI 323
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ M+ P+++TY +L+ LCK L R L K+MK +GI ++ +Y+I++D L
Sbjct: 324 SLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDAL 383
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G + A + L KG ++ I GLC+ GL ++L +M K P A
Sbjct: 384 CKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDA 443
Query: 417 RVWEALLLSSVSK 429
++ ++ + K
Sbjct: 444 ITFKTIICALFEK 456
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + +EMK +V YT++I L K + A+ + +MK GI+PD+ YT++
Sbjct: 320 DEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 379
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+ + A++ F LLV G +V TYNV INGLCK + + + ME G
Sbjct: 380 LDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGC 439
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
PD IT+ T++ AL + E ++ + ++EM +G++
Sbjct: 440 MPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RVG A ++ + MI G + T + ++ C +L E + EMK +
Sbjct: 248 RVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLK--EAFSLLNEMKLKNINPDVYT 305
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +I +L K+ K+ +A+ + +MK + P+IV YT +++G+ +A L ++
Sbjct: 306 FNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMK 365
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ PDVY+Y + ++ LCK +E + + G +V TYN ++ LCK
Sbjct: 366 EQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFG 425
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ +L +M+ KG + + T+ +I L K + +A L E + +GL
Sbjct: 426 DVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 114/199 (57%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L M G++P+ V ++ +LNG+ + + A +LFDE++ +G PDV TY+ IN
Sbjct: 31 AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLCK + I+++ MEE G KP+V+ Y+T++ +LCK + + E + EM +GI
Sbjct: 91 GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ TYS ++ G + G EA L ++ + + + + F+ + GL + G++ +A +
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210
Query: 405 KQMADKDVSPGARVWEALL 423
+ M +K V P + AL+
Sbjct: 211 ETMIEKGVEPNVNTYNALM 229
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 165/366 (45%), Gaps = 22/366 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
C+P Y +I +L ++ + L + R +P + + ++ + + R
Sbjct: 112 GCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRG--ISPNVVTYSSILHGFCNLGRSN 169
Query: 134 DSVNLF--------------YKIPKFRINRVGFAIE---ILNCMINDGFCVDGKTCSLIL 176
++ +LF + I +++ G +E + MI G + T + ++
Sbjct: 170 EATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALM 229
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
C Q + DE M + G + Y +I+ K ++ +A G+L +M
Sbjct: 230 DGYCSQSQM--DEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ PD V Y+ ++ G A++L +E+ GL+PD+ TY++ ++GLCKQ +++
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M+E +P++ Y L+Q +C +L REL + KGI ++ TY++MI GL
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL 407
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G EAC L + G S ++ I G + G A L+++M + S +
Sbjct: 408 LKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADS 467
Query: 417 RVWEAL 422
++ L
Sbjct: 468 STFQML 473
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 140/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ AI++L M G + S I+ S+C+ + ++ E + F+ EM G
Sbjct: 94 KMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLIT--EAMEFLSEMVNRGISPN 151
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y++++ + +A + QM + PD V + ++++G+ + ++A+ +F+
Sbjct: 152 VVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFE 211
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+V TYN ++G C Q+ ++ K+ M G P V +YN L++ CK
Sbjct: 212 TMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSG 271
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + L+ EM K + + TYS ++ G G +A LLEE + GL +
Sbjct: 272 RIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYS 331
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC++G + +A ELLK M + + P ++ L+
Sbjct: 332 IVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILI 369
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 128/256 (50%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T +++++ C + M KLG V ++ ++ L K K+ DA+
Sbjct: 9 DVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVK 68
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ ++M G +PD++ Y+ ++NG+ A +L ++ G P+V Y+ I+ LC
Sbjct: 69 LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLC 128
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + ++ ++ M G P+V+TY+++L C + N L K+M + ++ +
Sbjct: 129 KDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTV 188
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
T++I++DGL+ +G I+EA + E + KG+ + ++ + G C + + +A +L M
Sbjct: 189 TFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIM 248
Query: 408 ADKDVSPGARVWEALL 423
K +P R + L+
Sbjct: 249 VRKGCAPSVRSYNILI 264
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
FA +L M G + T S +L+ + + + + + EM K+G+ ++ Y+
Sbjct: 30 FAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII--DAVKLFDEMVKMGYEPDVITYST 87
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L K A+ +L +M+ G KP++V Y+ +++ + + +A E E++ G
Sbjct: 88 IINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRG 147
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+V TY+ ++G C + M E PD +T+N L+ L K + +
Sbjct: 148 ISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQ 207
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + M KG+ N+ TY+ ++DG S+ + EA L + KG ++ I G
Sbjct: 208 CVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGH 267
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G + +A LL +M+ K ++P + L+
Sbjct: 268 CKSGRIDEAKGLLAEMSHKALTPDTVTYSTLM 299
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 37/187 (19%)
Query: 274 PDVYTYNVYINGLCKQNN-------------------------------------VEAGI 296
PDVYT + IN C N+ + +
Sbjct: 8 PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K+ M ++G +PDVITY+T++ LCK+ +L+K+M+ KG N+ YS +ID L
Sbjct: 68 KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
I EA L E +N+G+ + + G C G +A L KQM +++V P
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187
Query: 417 RVWEALL 423
+ L+
Sbjct: 188 VTFNILV 194
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 179/372 (48%), Gaps = 29/372 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P A+ F+I L ++ + D + D + P+ + + TY +
Sbjct: 283 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAM--------PQNGVVPSVMTY-------N 327
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
++ + Y ++ R+ A++I M +G D T + ++ +C+Q+ ++ELL
Sbjct: 328 AMIVGYS----KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELL--- 380
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
K GF +V +TN+I EK DAL + N+M S K D+ + ++N +I +
Sbjct: 381 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 440
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A+EL +E+ GLVP+V TY I+G CK V+ ++++ ME G +P+ TY
Sbjct: 441 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 500
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N+L+ L K ++L++ L+ +M+ GI+ N+ TY+ ++ G + D A L E
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK---LD 431
GL + LC+ G +A + + K V+ +V+ L+ SK D
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVAL-TKVYYTTLIDGFSKAGNTD 616
Query: 432 FVNTSFIRLVDQ 443
F T R++D+
Sbjct: 617 FAATLIERMIDE 628
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 169/381 (44%), Gaps = 37/381 (9%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
C+P Y+ ++ L ++ + ++L ++K + P I + L++ D H F
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK--DGIIPNVITYTTLLQGQCDEHDFD 549
Query: 134 DSVNLF--------------YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
++ LF Y + + + G A E + ++ G + + ++
Sbjct: 550 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 609
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
+ + +D ++ M G Y+ ++ +L K++++ +AL IL+QM GIK
Sbjct: 610 SKAGN--TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
I YT++++ ++ + + A+ +++E+ G P TY V+IN CK+ +E +I
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
ME G PDV+TYN L+ + ++R +K M N TY +++ L K
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLL-K 786
Query: 360 GDI-----IEACG------------LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
G++ ++ G LLE + GL + + I G C+ G + +A
Sbjct: 787 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 846
Query: 403 LLKQMADKDVSPGARVWEALL 423
LL M K +SP ++ L+
Sbjct: 847 LLDHMCGKGLSPNEDIYTLLI 867
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 18/297 (6%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
FA ++ MI++G D T S++L ++C+Q+ L +E L + +M G + YT
Sbjct: 617 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL--NEALPILDQMSLRGIKCTIFAYTI 674
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I ++++ K A + N+M S G KP YT+ +N + AE+L ++ G
Sbjct: 675 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 734
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK-----VR- 325
+ PDV TYN+ I+G ++ + M +P+ TY LL+ L K VR
Sbjct: 735 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 794
Query: 326 ----------ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
EL+ +L++ M G+ + TYS +I G G + EAC LL+ K
Sbjct: 795 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 854
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
GL ++ I C KAL + M++ P + L++ ++ DF
Sbjct: 855 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDF 911
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 143/349 (40%), Gaps = 67/349 (19%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE---------------- 189
R + + + + ++ DG D T + ++ S C++ DL++
Sbjct: 160 RFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETF 219
Query: 190 -----LLGFVQ--EMKKLGFCFGMV----------DYTNVIRSLVKKEKVFDALGILNQM 232
+LG+ + E++K + F M+ YT +I+ L + V AL + M
Sbjct: 220 TCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMM 279
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K DG P++ +T +++G+ A LFD + G+VP V TYN I G K +
Sbjct: 280 KRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRM 339
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALC--KVRELNR-LRELVKE------------- 336
+K+ ME+ G PD TYNTL+ LC K E L VKE
Sbjct: 340 NDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLI 399
Query: 337 --------------MKWKGIV----LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
MK K + L+LQ + +I+ L K + EA LL E GL
Sbjct: 400 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLV 459
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ I G C+ G V ALE+LK M P A + +L+ V
Sbjct: 460 PNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 159/370 (42%), Gaps = 28/370 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y+ +I L + Q + + L + +E F F +LI Y A +F D
Sbjct: 353 GCHPDDWTYNTLIYGLCD--QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDD 410
Query: 135 SVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
++ + K+ + +R+ A E+LN + +G + T + I+
Sbjct: 411 ALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIID 470
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
C+ + D L ++ M++ G Y +++ LVK +K+ A+ +L +M+ DGI
Sbjct: 471 GYCKSGKV--DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P+++ YT +L G + D+ A LF+ + GL PD + Y V + LCK E
Sbjct: 529 IPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS 588
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
I G + Y TL+ K + L++ M +G + TYS+++ L
Sbjct: 589 FIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 645
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETIC--GLCQRGLVRKALELLKQMADKDVSPG 415
+ + EA +L++ +G+ + ++F TI + + G A + +M P
Sbjct: 646 KQKRLNEALPILDQMSLRGI--KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 703
Query: 416 ARVWEALLLS 425
A + + S
Sbjct: 704 ATTYTVFINS 713
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +RSL + + + +Q+ DG+ PD V Y ++ + D A F LL
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P+ +T N + G C+ + + M +G + + +Y L+Q LC + +
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 270
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ L MK G N++ ++ +I GL G + +A L + G+ ++ I
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + G + AL++ + M P + L+
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 365
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 1/214 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA+ + + S + CY L + + ++ +L+ GL+PD TYN I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
CK+ ++ + + E G +P+ T N L+ C+ EL + L M G
Sbjct: 191 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N +Y+I+I GL + +A L G F I GLC+ G V A L
Sbjct: 251 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
M V P + A+++ SKL +N +
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIV-GYSKLGRMNDAL 343
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 133/356 (37%), Gaps = 45/356 (12%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y ++ L + + + +LD + R + F + LI
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR-GIKCTIFAYTILID---------- 677
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
R + A + N M + G T ++ ++S C++ L E L +
Sbjct: 678 --------EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDL--I 727
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+M++ G +V Y +I + A L +M +P+ Y ++L ++
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 787
Query: 255 E-DYVKA---------------EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
YV++ +L + ++ GL P V TY+ I G CK +E +
Sbjct: 788 NLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 847
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M G P+ Y L++ C + + V M G L++Y +++ GL +
Sbjct: 848 LDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 907
Query: 359 KGDIIEA----CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+GD + C LLE N + D GL + G V ++L M +
Sbjct: 908 EGDFEKVKSLFCDLLELGYNHDEVAWKILND----GLLKAGYVDICFQMLSIMEKR 959
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +M G+ P + Y+ ++ G +A L D + GL P+ Y + I C
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
E + ++ M E G +P + +Y L+ LC + +++ L ++ G +
Sbjct: 872 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 931
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ I+ DGL G ++ C + + K C SS
Sbjct: 932 AWKILNDGLLKAG-YVDICFQMLSIMEKRYCCISS 965
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 75/162 (46%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
++ M K G + Y+++I K ++ +A +L+ M G+ P+ YT+++
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ + KA + G P + +Y + + GLC + + E + + ELG D +
Sbjct: 872 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 931
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ L L K ++ +++ M+ + ++ QTY+++ +
Sbjct: 932 AWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 973
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 132/239 (55%), Gaps = 4/239 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ ++ ++C R + + +G ++ M+ G +V Y +IR L V A+ +LN+M
Sbjct: 98 TTLMRALCADR--RAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM 155
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
GI+P++V Y+ +L+G + ++F+E+ G+ PDV Y I+ LC+ V
Sbjct: 156 CESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKV 215
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ +++ M E G +P+V+TYN L+ ++CK + +L K M KG+ ++ TY+ +
Sbjct: 216 KKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTL 275
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSM--FDETICGLCQRGLVRKALELLKQMAD 409
I GL+S ++ EA LLEE + + + F+ I GLC+ G +R+AL++ MA+
Sbjct: 276 ITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAE 334
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 118/230 (51%), Gaps = 5/230 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
V Y V+ +L ++ + AL +L M + +P+ + YT ++ + +A L
Sbjct: 57 VSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGL 116
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+ G+ PDV TY I GLC +V+ ++++ M E G +P+V+ Y+ LL CK
Sbjct: 117 LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCK 176
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ ++ +EM +GI ++ Y+ +ID L G + +A +++ +GL
Sbjct: 177 TGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVT 236
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
++ I +C+ G VR+AL+L K M++K V P + L+ LSSV ++D
Sbjct: 237 YNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMD 286
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 41/286 (14%)
Query: 176 LSSVCEQRDLSSDELLGFVQEM--KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
LSSV E DE + ++EM + ++ + +VI L K + AL + M
Sbjct: 279 LSSVLEM-----DEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMA 333
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
+G + ++V + +++ G++ KA EL DE+ GL PD +TY++ ING CK VE
Sbjct: 334 ENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVE 393
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW-------------- 339
++ M G +P+ + Y LL+A+C + + R+L EM
Sbjct: 394 RAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIH 453
Query: 340 --------------------KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
+G++ + TYSI I+ A GD+ A +L++ G
Sbjct: 454 GAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVP 513
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++FD I G +G K LEL ++M KDV+ ++ ++ S
Sbjct: 514 DVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTS 559
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
R+++V A+E+++ M + G D T S++++ C+ R + E ++ EM+ G
Sbjct: 352 LRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAE--SYLSEMRHQGMEP 409
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y +++++ + + A + N+M + K D Y+ +++G + AEE
Sbjct: 410 EPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFL 468
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ GL+PD TY++ IN K ++ A +++ M G PDV +++L+Q
Sbjct: 469 KDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAK 528
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+ ++ EL +EM K + L+ + S ++ L G IE LL+
Sbjct: 529 GDTEKILELTREMTAKDVALDPKIISTIVTSL---GASIEGQKLLQ 571
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE---LGSKPDVITYNTLLQALCK 323
L L V D +YN + LC+Q ++A + ++ M L S+P+ I+Y TL++ALC
Sbjct: 47 LSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCA 106
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
R + L++ M+ G+ ++ TY +I GL D+ A LL E G+ +
Sbjct: 107 DRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVV 166
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + G C+ G ++ ++M+ + + P ++ AL+ S
Sbjct: 167 YSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDS 208
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL---NLQTYSIMIDGL 356
A + L S D ++YNT+L ALC+ L+ L++ M + + N +Y+ ++ L
Sbjct: 45 ALLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRAL 104
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +A GLL + G+ + I GLC V A+ELL +M + + P
Sbjct: 105 CADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNV 164
Query: 417 RVWEALL 423
V+ LL
Sbjct: 165 VVYSCLL 171
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 122 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 175
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 176 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 235
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG +GD+ A + + + + + G
Sbjct: 296 HHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSG 355
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P AR + ++
Sbjct: 356 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 388
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 108/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 166
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 167 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 227 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A L+ +M+ K + P + L+
Sbjct: 287 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 318
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPN 240
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A L D
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLID 300
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ V GL PD TY I+G CK+ ++++ + M + + D + Y L LC+
Sbjct: 301 EMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEG 360
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 361 RSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y +GLC++ KM+ M +G KPD TY ++ CK ++ + +
Sbjct: 343 RLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G V ++ T
Sbjct: 403 LLKEMQRDGHVPSVVT 418
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 137/254 (53%), Gaps = 4/254 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +C+ +D+ + EM G V + +++ L K K A +L
Sbjct: 12 TYNILIDGLCKAS--KTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 69
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M +P Y +++G+ Q++ +A+ L DE + G VPDV TY++ +GLCK+
Sbjct: 70 VMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRG 129
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ +++ M G P+++TYNTL+ LCK + + EL++ + G V ++ TY+
Sbjct: 130 RIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYT 189
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMAD 409
I++DGL +G + +A ++E L +G CT S + + + GLC+ G V +A + K+M
Sbjct: 190 IIVDGLCKEGRLDKALKMVEGMLKRG-CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Query: 410 KDVSPGARVWEALL 423
KD + A + +L+
Sbjct: 249 KDCTADALAYVSLV 262
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 6/220 (2%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M + PD+ Y ++++G+ KA E+ E++ G+ PD T+N ++GLCK
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
E ++A M E +P TYNTL+ LCK + ++R + LV E G V ++ TYSI
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+ DGL +G I EA L++E G ++ I GLC+ KA ELL+ +
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 412 VSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPC 449
P + ++ L +LD +++V+ +L C
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLD----KALKMVEGMLKRGC 216
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 150/334 (44%), Gaps = 25/334 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y +++ L + + + + ++ ++ L+ Y + R ++
Sbjct: 215 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD-CTADALAYVSLVNGYCKSSRTKE 273
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ + I R I++ N ++ DG+C +G+ DE+
Sbjct: 274 AQKVVDGI------RGTPYIDVYNALM-DGYCKEGRL----------------DEIPNVF 310
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M G + Y V+ L K KV +A L M S G PD+V Y ++++G+
Sbjct: 311 EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 370
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A ++ D+++ G+ PD TYN + CK+ + + ++ M + G PD +TY
Sbjct: 371 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 430
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNL-QTYSIMIDGLASKGDIIEACGLLEEAL 373
NTL+ L + L EL+ EM G V++ TY+ +ID L +G + +A L++
Sbjct: 431 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 490
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G+ + ++ I LC+ G + +A LL +M
Sbjct: 491 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 524
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 171/368 (46%), Gaps = 35/368 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L S C P +Y+ +I L + S+ + VLD + + + L+ +
Sbjct: 344 FLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQM-IQAGIPPDAVTYNTLMAQF 402
Query: 127 ADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDG 169
RF D+V + + K + NR+G A E+++ M+ +G V
Sbjct: 403 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 462
Query: 170 -KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + I+ +C++ L LL + M G V Y I L K+ ++ +A +
Sbjct: 463 CTTYNTIIDRLCKEGCLKQALLL--MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 520
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLGLVPDVYTYNVYINGLC 287
L++M D ++ D V YT V+ G+ E +A +L E++ V GL +T+N+ I+
Sbjct: 521 LSEM--DTLR-DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFT 577
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K ++ + ++ M + G P VITYN ++ LCK+ ++++ EL EM +GIV +
Sbjct: 578 KTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSV 637
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC-----GLCQRGLVRKALE 402
+Y+++I GL +G EA +LEE + + D+ C L +G +A E
Sbjct: 638 SYTVLIYGLCGQGRGKEALQVLEE-----MASSDCEIDDLKCRKLYLALRGQGRGEEAAE 692
Query: 403 LLKQMADK 410
LL++M K
Sbjct: 693 LLRRMTTK 700
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 137/272 (50%), Gaps = 7/272 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A E+L+ M++ G D T + I+ +C+ + LL + E C Y
Sbjct: 29 ASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSC---CTYNT 85
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L K++ V A ++++ S G PD+V Y+++ +G+ + +A EL E+ G
Sbjct: 86 LISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNG 145
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P++ TYN I+GLCK + E +++ + G PDV+TY ++ LCK L++
Sbjct: 146 CTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKAL 205
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
++V+ M +G ++ TY+ +++GL G + EA + +E ++K + + + G
Sbjct: 206 KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGY 265
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ ++A +++ + +P V+ AL+
Sbjct: 266 CKSSRTKEAQKVVDGIRG---TPYIDVYNALM 294
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 34/287 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L +++ GF D T ++I+ +C++ L D+ L V+ M K G ++ YT +
Sbjct: 169 AYELLETLVSSGFVPDVVTYTIIVDGLCKEGRL--DKALKMVEGMLKRGCTPSVITYTAL 226
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV--------------------- 251
+ L + +V +A I +M S D + Y ++NG
Sbjct: 227 MEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY 286
Query: 252 -----IVQEDYVKAEEL------FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+ + Y K L F+++ G VP++ TYN+ ++GLCK V+ +
Sbjct: 287 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 346
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M G PDV++YN ++ L K + R+++ +M GI + TY+ ++ +
Sbjct: 347 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 406
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+A G+L+ + G+ + ++ I GL Q + A EL+ +M
Sbjct: 407 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 453
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 140/281 (49%), Gaps = 7/281 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ ++ A ++L+ MI G D T + +++ C++ D+ +G ++ M K G
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF--DDAVGILKNMIKAGVDP 425
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDG-IKPDIVCYTMVLNGVIVQEDYVKAEEL 263
V Y +I L + ++ DA ++++M +G + Y +++ + + +A L
Sbjct: 426 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 485
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
D + G+ + TYN++I+ LCK+ ++ +++ M+ L D ++Y T++ LCK
Sbjct: 486 MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCK 542
Query: 324 VRELNRLRELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+L+R +L +EM KG+ + T++++ID + EA LLE + +G
Sbjct: 543 AEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVI 602
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I LC+ V KA EL +MA + + + + L+
Sbjct: 603 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI 643
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 186/417 (44%), Gaps = 59/417 (14%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+ Y+ I L +F I +L + K E E IF+ ++K Y A + ++ L
Sbjct: 113 DVYYVFINKLGAIGKFKLIDKLLMQM-KEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLL 171
Query: 141 KI-------PKFRINRVGFAIEIL---NC----------MINDGFCVDGKTCSLILSSVC 180
+ P F+ +EIL NC M++ G T +++ ++C
Sbjct: 172 DMRAVYLCEPTFK--SYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALC 229
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
++ D +++M K G + Y +I +L +K +V +AL +L +M G PD
Sbjct: 230 MFNEV--DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPD 287
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM-- 298
+ + V++G+ A +L D +L+ G PD TY ++GLC+ + K+
Sbjct: 288 VQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI 347
Query: 299 -IAC-----------------------------MEELGSKPDVITYNTLLQALCKVRELN 328
I C M G +PD+ TYN L+ LCK L+
Sbjct: 348 KIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS 407
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R+LV EM +G N+ TY+I+++GL G + EA +L E +GL S +++ I
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
C LC++ V AL LL +M K P + +L+ + K+D ++ +F RL +L
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY-GLCKVDRIDEAF-RLFHNML 522
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 142/274 (51%), Gaps = 2/274 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+ FA +++N M G + T +++++ +C+ L L+ + EM G V Y
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV--LHEMSARGLTINSVIY 463
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I +L +KEKV AL +L++M + G KPD+ Y ++ G+ + +A LF +L+
Sbjct: 464 NCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLL 523
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G V + TYN I+ L ++ + + ++ M G D ITYN L++A CKV + +
Sbjct: 524 DGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEK 583
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL ++M G+ + + +IMI+GL G + A L +A+N+G ++ +
Sbjct: 584 GLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLN 643
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G +++AL L ++ + V P A + +
Sbjct: 644 GLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 175/409 (42%), Gaps = 50/409 (12%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL + + C P Y +I L++ +Q +S L +E+ +F+ +
Sbjct: 239 SLLRDMTKHGCVPNSIVYQTLIHALSQKNQ---VSEALKLLEE---------MFV--MGC 284
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
D F D ++ K+ N++ A ++++ M+ GF D T +L +C L
Sbjct: 285 MPDVQTFNDVIHGLCKV-----NKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339
Query: 186 SS-----------------------------DELLGFVQE-MKKLGFCFGMVDYTNVIRS 215
+ E F+ E M GF + Y ++
Sbjct: 340 NEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHG 399
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K+ + A ++N+M G +P+++ Y +++NG+ +A + E+ GL +
Sbjct: 400 LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTIN 459
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
YN I LC++ V + +++ M G KPD+ TYN+L+ LCKV ++ L
Sbjct: 460 SVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFH 519
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M G V N TY+ +I L +G +A L+ + L +G ++ I C+ G
Sbjct: 520 NMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVG 579
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ K LEL +QM D + ++++ + K+ V+ +F L D I
Sbjct: 580 NIEKGLELYEQMI-MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 112/263 (42%), Gaps = 26/263 (9%)
Query: 201 GFCFGMVDYTNVIRSL--VKKEKVFDALGILNQMKSDGI--KPDIVCYTMVLNGVIVQED 256
G+C Y I L + K K+ D L L QMK +GI + I +I+ +
Sbjct: 107 GYCHTFDVYYVFINKLGAIGKFKLIDKL--LMQMKEEGIVFRESIF--------MIIMKH 156
Query: 257 YVKAEE-------LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
Y KA + L D V P +Y++ + L N + + M G P
Sbjct: 157 YGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSP 216
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
V T+ +++ALC E++ L+++M G V N Y +I L+ K + EA LL
Sbjct: 217 TVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLL 276
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSV 427
EE G F++ I GLC+ + A +L+ +M + P + LL L +
Sbjct: 277 EEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRI 336
Query: 428 SKLDFVNTSFIRLV---DQILNT 447
KL+ I++ + ILNT
Sbjct: 337 GKLNEARKILIKIPCPNNAILNT 359
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 35/276 (12%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E G + EM + Y +I +L K+ KV ++ +L M G+KPD+V Y++++
Sbjct: 203 EAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILM 262
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G + + KA+++F ++ G+ PDVY+YN+ INGLCK V+ + ++ M
Sbjct: 263 DGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMI 322
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKE-------------------------------- 336
PD +TY++L+ LCK+ + + +L KE
Sbjct: 323 PDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIAL 382
Query: 337 ---MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
MK +GI N TY+ +IDGL G + + L + L KG C + I GLC+
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK 442
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G+ +AL + +M D P A +E ++ S + K
Sbjct: 443 EGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEK 478
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 143/280 (51%), Gaps = 24/280 (8%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
F++++V + I + +G C G+T C++ L E R D
Sbjct: 111 FQMDQVSYGILL------NGLCKIGETRCAIKLLRTIEDRSTRPD--------------- 149
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y+ +I L K + V +A + ++M + GI PD++ YT ++ G + ++A L
Sbjct: 150 --VVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGL 207
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+E+++ + P++YTYN I+ LCK+ V+ ++A M + G KPDV+ Y+ L+ C
Sbjct: 208 LNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCL 267
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
V E+ + +++ M G+ ++ +Y+I+I+GL + EA LL E L+K + +
Sbjct: 268 VGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVT 327
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ G + L+L K+M + + +LL
Sbjct: 328 YSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
IL S+ + + + ++ ++M+ G +V + +I ++ + +L ++
Sbjct: 16 ILGSLVKMKHYPT--VISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILK 73
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +P+ + ++ G+ ++ + K+ D+++ G D +Y + +NGLCK
Sbjct: 74 LGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRC 133
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
IK++ +E+ ++PDV+ Y+T++ LCK + ++ +L EM +GI ++ TY+ +I
Sbjct: 134 AIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLIC 193
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G G ++EA GLL E + K + ++ I LC+ G V+++ LL M K V P
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKP 253
Query: 415 GARVWEALL 423
++ L+
Sbjct: 254 DVVIYSILM 262
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 141/290 (48%), Gaps = 3/290 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ ++ F+ +L ++ G+ + + ++ +C + ++ L F ++ GF
Sbjct: 57 HLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKS--LHFHDKVVAQGFQMD 114
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ L K + A+ +L ++ +PD+V Y+ +++G+ + +A +L+
Sbjct: 115 QVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYS 174
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G+ PDV TY I G C + ++ M P++ TYNTL+ LCK
Sbjct: 175 EMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEG 234
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + L+ M KG+ ++ YSI++DG G++ +A + + G+ ++
Sbjct: 235 KVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYN 294
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
I GLC+ V +A+ LL++M K++ P + + L+ + KL + T
Sbjct: 295 IIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSS-LIDGLCKLGRITT 343
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 7/232 (3%)
Query: 190 LLGFVQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
L+G VQ+ K++ G + Y +I L K ++V +A+ +L +M + PD V
Sbjct: 267 LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV 326
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y+ +++G+ +L E+ G ++ TYN ++GLCK N++ I + M
Sbjct: 327 TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKM 386
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+E G +P+ TY L+ LCK L + + L + + KG +++ TY++MI GL +G
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMF 446
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
EA + + + G + F+ I L ++ KA +LL +M K + P
Sbjct: 447 DEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 88/185 (47%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P I+ + +L ++ + Y L ++ G+VPD+ T ++ IN C + +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ + +LG +P+ I NTL++ LC E+ + ++ +G ++ +Y I+++GL
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G+ A LL ++ M+ I GLC+ LV +A +L +M + + P
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 419 WEALL 423
+ L+
Sbjct: 188 YTTLI 192
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 73/157 (46%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L+L +P + + + L K + I + ME G PD++T + L+ C + +
Sbjct: 1 MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ ++ ++ G N + ++ GL KG++ ++ ++ + +G +
Sbjct: 61 MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ G R A++LL+ + D+ P ++ ++
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTII 157
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 134/251 (53%), Gaps = 3/251 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S I+ + E + + E +GF M+ LGF +V Y +I + + A IL+ M
Sbjct: 178 SSIVFDLLEGKLKKAREFIGF---MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 234
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ GI+PD Y +++G+ + +A LFD+++ +GLVP+ TYN I+G C + ++
Sbjct: 235 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 294
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
E M + G P V TYN L+ AL + +++KEM+ KGI+ + TY+I+
Sbjct: 295 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 354
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G + G+ A L E L+KG+ + I L +R +++A +L +++ D+ V
Sbjct: 355 INGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 414
Query: 413 SPGARVWEALL 423
SP ++ A++
Sbjct: 415 SPDVIMFNAMI 425
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 173/369 (46%), Gaps = 30/369 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P +Y+ +I + +LD + + + E + + LI R +++
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAM-RVKGIEPDSYTYGSLISGMCKEGRLEEAS 263
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDG---------------------KTCSLI 175
LF K+ I V A+ N +I DG+C G T +L+
Sbjct: 264 GLFDKM--VEIGLVPNAV-TYNTLI-DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 319
Query: 176 LSSV-CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+ ++ E R +D++ ++EM+K G + Y +I + A + N+M S
Sbjct: 320 VHALFMEGRMGEADDM---IKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLS 376
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
GI+P V YT ++ + + +A++LF+++L G+ PDV +N I+G C NVE
Sbjct: 377 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVER 436
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ M+ PD +T+NTL+Q C+ ++ R L+ EMK +GI + +Y+ +I
Sbjct: 437 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLIS 496
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G +GDI +A + +E L+ G ++ I LC+ A ELLK+M +K +SP
Sbjct: 497 GYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISP 556
Query: 415 GARVWEALL 423
+ +L+
Sbjct: 557 DDSTYLSLI 565
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 139/294 (47%), Gaps = 4/294 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A IL+ M G D T ++S +C++ L +E G +M ++G V Y +
Sbjct: 227 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL--EEASGLFDKMVEIGLVPNAVTYNTL 284
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K + A ++M GI P + Y ++++ + ++ +A+++ E+ G+
Sbjct: 285 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 344
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD TYN+ ING + N + + M G +P +TY +L+ L + + +
Sbjct: 345 IPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADD 404
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +++ +G+ ++ ++ MIDG + G++ A LL+E K + F+ + G C
Sbjct: 405 LFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRC 464
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ G V +A LL +M + + P + L+ + D + +R D++L+
Sbjct: 465 REGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVR--DEMLS 516
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 6/249 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F R+G A +++ M G D T +++++ R ++ EM G
Sbjct: 324 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY--SRCGNAKRAFDLHNEMLSKGIEP 381
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V YT++I L ++ ++ +A + ++ G+ PD++ + +++G + +A L
Sbjct: 382 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLL 441
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PD T+N + G C++ VE ++ M+ G KPD I+YNTL+ +
Sbjct: 442 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRR 501
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS--KGDIIEACGLLEEALNKGLCTQSS 382
++ + EM G L TY+ +I L +GD+ E LL+E +NKG+ S
Sbjct: 502 GDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE--LLKEMVNKGISPDDS 559
Query: 383 MFDETICGL 391
+ I G+
Sbjct: 560 TYLSLIEGM 568
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 75/140 (53%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L +M + PD V + ++ G + +A L DE+ G+ PD +YN I+
Sbjct: 437 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLIS 496
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G ++ +++ + M +G P ++TYN L++ LCK +E + EL+KEM KGI
Sbjct: 497 GYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISP 556
Query: 345 NLQTYSIMIDGLASKGDIIE 364
+ TY +I+G+ + ++E
Sbjct: 557 DDSTYLSLIEGMGNVDTLVE 576
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 110 ENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG 169
+ E + LI + +R +++ +LF KI V + + N MI DG C +G
Sbjct: 377 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD---QGVSPDVIMFNAMI-DGHCANG 432
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+ ++EM + V + +++ ++ KV +A +L
Sbjct: 433 NV----------------ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 476
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
++MK GIKPD + Y +++G + D A + DE+L +G P + TYN I LCK
Sbjct: 477 DEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKN 536
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ +++ M G PD TY +L++ + V L
Sbjct: 537 QEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTL 574
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + RE + M+ G N+ +Y+ +I G +S+G+I A +L+ KG+ S +
Sbjct: 188 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 247
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
I G+C+ G + +A L +M + + P A + L+ +K D
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 294
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 7/270 (2%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
+ N MI G T ++++ +C++ DL + L FVQ M+++G +V Y ++I
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL-FVQ-MREMGLSPDVVTYNSLID 332
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
K + + + N+MK G PDI+ Y ++N E +A E F E+ GL P
Sbjct: 333 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 392
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+V TY+ I+ CK+ ++ IK+ M G P+ TY +L+ A CK L +L+
Sbjct: 393 NVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLL 452
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M G+ LN+ TY+ ++DGL G +IEA + L G+ ++ + G +
Sbjct: 453 NDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKA 512
Query: 395 GLVRKALELLKQMADKDVSP-----GARVW 419
+ A+++LKQM + ++ P G+ +W
Sbjct: 513 ERMEDAMKILKQMTECNIKPDLILYGSIIW 542
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 138/285 (48%), Gaps = 10/285 (3%)
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
F K+P+ A E + M N+G + T S ++ + C++ + + +M+
Sbjct: 372 FEKMPR--------AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGA--IKLFVDMR 421
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
+ G YT++I + K + +A +LN M G+K +IV YT +L+G+ +
Sbjct: 422 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 481
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+AEE+F +L G+ P+ Y ++G K +E +K++ M E KPD+I Y +++
Sbjct: 482 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 541
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
C R+L + +++EMK +GI N + +ID G +A +E + G+
Sbjct: 542 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 601
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ G+V A++ +M + P V+ +L+
Sbjct: 602 ATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 646
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 39/298 (13%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A ++LN M+ G ++ T + +L +C+ R + ++E+ + M K G YT
Sbjct: 448 AWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF---RSMLKDGISPNQQVYTA 504
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG-----------VIVQE----- 255
++ +K E++ DA+ IL QM IKPD++ Y ++ G +I++E
Sbjct: 505 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564
Query: 256 -------------DYVKAEE------LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
Y KA + F E+ +G+ + TY V I+GLCK VE +
Sbjct: 565 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAV 624
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
M LG +P+V Y +L+ LCK + ++L EM+ +G+ ++ ++ +IDG
Sbjct: 625 DYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGN 684
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G++ EA L+ + ++ + G Q G + +A + +M +K + P
Sbjct: 685 LKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 742
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A E F + +P + N ++ L K N + K M G P V TYN ++
Sbjct: 237 EANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMI 296
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCK +L R L +M+ G+ ++ TY+ +IDG G + E L E + G
Sbjct: 297 DYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCV 356
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I C+ + +A E +M + + P + L+
Sbjct: 357 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 401
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
N +P Y +I + + +L+ ++ R P I +I Y A + D
Sbjct: 529 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP-VISTTIIDAYFKAGKSSD 587
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
++N F ++ + A + C++ DG C G +L+ D +
Sbjct: 588 ALNFFQEMQDVGVE----ATIVTYCVLIDGLCKAGIV------------ELAVD----YF 627
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
M LG + YT++I L K + A + ++M+ G+ PDI +T +++G +
Sbjct: 628 CRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKH 687
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A L + L + D++ Y ++G + + K M E G P+ +
Sbjct: 688 GNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLC 747
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIV 343
LL+ K +L+ EL EM+ G++
Sbjct: 748 ICLLREYYKRGQLDEAIELKNEMERMGLI 776
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 173/372 (46%), Gaps = 21/372 (5%)
Query: 62 HILSSLLHSFSIYNCEPPPEA-YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
H S++ H S +N + + F+I + +S ISS++ + +F
Sbjct: 100 HNYSTMAHFLSSHNLLSQTHSLFLFIISKMGHHSSTSLISSLIQTVPTHHRHNHSVLVFD 159
Query: 121 DLIKTYADAHRFQDSVNLF-------YKIP----KFRINRV-------GFAIEILNCMIN 162
LI Y D+ +D++ + IP + + RV G E +++
Sbjct: 160 ALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLD 219
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
G+ + ++++ C+ D+ + ++ E+ + G +V + +I + + V
Sbjct: 220 YGYPPNVYLFNILMHGFCKIGDVMNARMV--FDEISRRGLRPSVVSFNTLISGYCRSKNV 277
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+ + + M+S+ I PD+ Y+ ++NG+ + +A LFDE+ +GLVP+ T+
Sbjct: 278 EEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTL 337
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+G CK ++ ++ M++ G +PD+ITYN L+ LC+ +L R+L+ EM G
Sbjct: 338 IDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGF 397
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ T++ ++DG GD+ A + + + +G+ F I GLC+ G VR A
Sbjct: 398 KPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAER 457
Query: 403 LLKQMADKDVSP 414
+LK M P
Sbjct: 458 MLKDMLSAGHKP 469
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S +++ +C++ + +E G EM ++G V +T +I K K+ AL
Sbjct: 298 TYSALINGLCKESRV--EEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFE 355
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
MK GI+PD++ Y ++NG+ D +A +L +E++ G PD T+ ++G CK
Sbjct: 356 IMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDG 415
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++++ +++ M E G + D + + L+ LC+ + ++K+M G + TY+
Sbjct: 416 DMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYT 475
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ID KGD+ LL+E G ++ + G C++G ++ A LL M +
Sbjct: 476 MVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNM 535
Query: 411 DVSPGARVWEALL 423
+V P + LL
Sbjct: 536 EVVPNDITFNILL 548
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G P++ + ++++G D + A +FDE+ GL P V ++N I+G C+ NVE G
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ + ME PDV TY+ L+ LCK + L EM G+V N T++ +IDG
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G I A E ++G+ ++ I GLC+ G +++A +LL +M P
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 416 ARVWEALL 423
+ L+
Sbjct: 401 KITFTTLM 408
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 117/248 (47%), Gaps = 2/248 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+RV A + + M G +G T + ++ C+ + D L + MK G ++
Sbjct: 310 SRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKI--DLALRNFEIMKDRGIRPDLI 367
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L + + +A +LN+M +G KPD + +T +++G D A E+ D +
Sbjct: 368 TYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRM 427
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G+ D + I+GLC+ V +M+ M G KPD TY ++ CK ++
Sbjct: 428 VEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDV 487
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+L+KEM+ G V + TY+ +++G +G + A LL LN + F+
Sbjct: 488 KMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNIL 547
Query: 388 ICGLCQRG 395
+ G C+ G
Sbjct: 548 LDGHCKHG 555
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 2/216 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
++ A+ M + G D T + +++ +C DL E + EM GF +
Sbjct: 346 KIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLK--EARKLLNEMIGNGFKPDKIT 403
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+T ++ K + AL I ++M +GI+ D V +T +++G+ AE + ++L
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDML 463
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD TY + I+ CK+ +V+ G K++ M+ G P V+TYN L+ CK ++
Sbjct: 464 SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMK 523
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
+ L+ M +V N T++I++DG G ++
Sbjct: 524 NAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD 559
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
E + E+L G P+VY +N+ ++G CK +V + + G +P V+++NTL+
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ + + L M+ + I ++ TYS +I+GL + + EA GL +E GL
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F I G C+ G + AL + M D+ + P + AL+
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALI 373
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 178/386 (46%), Gaps = 17/386 (4%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDIS-SVLDHIEKREN 111
++ + K P + S+++H + + +NS+ I SV + + + E+
Sbjct: 62 RRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLES 121
Query: 112 FETPEFIFIDLIKTYADAHRFQDSVNLFYK---IPKFRI-----------NRVGFAIEIL 157
+ +F LI +++ ++++ ++YK +P + R ++
Sbjct: 122 SKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVY 181
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
M+ G + T ++ C Q D + EM + +V YT +IR L
Sbjct: 182 GDMVARGASPNVVTYGTLIDGCCRQGDFL--KAFRLFDEMIEKKIFPTVVIYTILIRGLC 239
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
+ ++ +A + M++ G+ P++ Y +++G KA EL+ E+L GL+P+V
Sbjct: 240 GESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVV 299
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
T+ + I+GLCK + + + K + M G P++ YN L+ CK L+ L E+
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ I+ ++ TYSI+I GL + EA GLL+E KG + ++ I G C+ G +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
KA+E+ QM +K + P + L+
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLI 445
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 128/251 (50%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ +C + +S E + M+ G + Y ++ K V AL + +M
Sbjct: 232 TILIRGLCGESRISEAE--SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
DG+ P++V + ++++G+ ++ V A + ++ G+VP+++ YN I+G CK N+
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + + +E+ PDV TY+ L++ LC V + L++EMK KG + N TY+ +
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDG +G++ +A + + KG+ F I G C+ G + A+ L +M K +
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 413 SPGARVWEALL 423
P + AL+
Sbjct: 470 LPDVVAYTALI 480
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I V A+E+ M+ DG + T +++ +C+ ++ S F+ +M G
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR--KFLIDMASFGVVPN 332
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I K + +AL + ++++ I PD+ Y++++ G+ + +A+ L
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G +P+ TYN I+G CK+ N+E I++ + M E G +P++IT++TL+ CK
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L EM KG++ ++ Y+ +IDG G+ EA L +E GL
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVS 413
I GLC+ G + A++L D +
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTT 540
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R+ A + M N G + T + ++ C+ + + L QEM G +V
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK--KALELYQEMLGDGLLPNVV 299
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I L K +++ A L M S G+ P+I Y +++G + +A L E+
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
++PDV+TY++ I GLC + +E ++ M++ G P+ +TYNTL+ CK +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ E+ +M KGI N+ T+S +IDG G + A GL E + KGL +
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTAL 479
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G ++A L K+M + + P L+
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T++I V DA + +++ S +++ +T V++ + + KA +LF ++ +
Sbjct: 670 TSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQMQM 725
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD+ T V ++ ++ G + A + G D+ N+L+ K E+
Sbjct: 726 DDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGT 785
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC---GLLEEAL--------NKGLC 378
R +S+++ + ++ AC GL+EE + L
Sbjct: 786 ARR----------------FSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLR 829
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ S F + LC+ GL+ +A E + +M V P A VW LL
Sbjct: 830 PRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLL 871
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 121/227 (53%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ + M+ F V Y +I SL + K+ AL +L+Q+ SD +P ++ YT++
Sbjct: 171 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTIL 230
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ +++ +A +L DE+L GL PD++TYN I G+CK+ V+ +MI +E G
Sbjct: 231 IEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGC 290
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDVI+YN LL+AL + +L+ +M + N+ TYSI+I L G I EA
Sbjct: 291 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 350
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
LL+ KGL + +D I C+ G + A+E L+ M P
Sbjct: 351 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 397
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 145/348 (41%), Gaps = 68/348 (19%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-------------------- 185
++NR+ A +L+ M + F D T ++++ S+C + L
Sbjct: 166 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVI 225
Query: 186 -------------SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
DE L + EM G M Y +IR + K+ V A ++ +
Sbjct: 226 TYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNL 285
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL----FDE---------------------- 266
+ G +PD++ Y ++L ++ Q + + E+L F E
Sbjct: 286 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 345
Query: 267 -----LLVL----GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
LL L GL PD Y+Y+ I C++ ++ I+ + M G PD++ YNT+
Sbjct: 346 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 405
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L LCK + ++ E+ ++ G N +Y+ M L S GD I A ++ E ++ G+
Sbjct: 406 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGI 465
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++ I LC+ G+V KA ELL M + P + +LL
Sbjct: 466 DPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLG 513
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 171/376 (45%), Gaps = 24/376 (6%)
Query: 51 TKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE 110
+K Q+ H LS + N P + + A N Q + + +++
Sbjct: 17 SKTQKHYSNSSHGLSHNRSLLTFSNSNPNHDNGKSFSSSGARNLQATTTDAAIPTERRQQ 76
Query: 111 NFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK 170
+ ++ F ++K + HR S N ++ +L M+ G+ D
Sbjct: 77 HSQSLGFRDTQMLKIF---HRSCRSGNYIE------------SLHLLETMVRKGYNPDVI 121
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD---YTNVIRSLVKKEKVFDALG 227
C+ ++ R++ + + ++ ++K FG D Y +I K ++ DA
Sbjct: 122 LCTKLIKGFFTLRNVP--KAVRVMEILEK----FGQPDVFAYNALINGFCKMNRIDDATR 175
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L++M+S PD V Y +++ + + A ++ D+LL P V TY + I
Sbjct: 176 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATM 235
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ V+ +K++ M G KPD+ TYNT+++ +CK ++R E+++ ++ KG ++
Sbjct: 236 LEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVI 295
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+Y+I++ L ++G E L+ + ++ + I LC+ G + +A+ LLK M
Sbjct: 296 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 355
Query: 408 ADKDVSPGARVWEALL 423
+K ++P A ++ L+
Sbjct: 356 KEKGLTPDAYSYDPLI 371
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 2/220 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A+ +L M G D + ++++ C + L D + F++ M G
Sbjct: 341 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL--DVAIEFLETMISDGCLPD 398
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V+Y V+ +L K K AL I ++ G P+ Y + + + D ++A +
Sbjct: 399 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 458
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G+ PD TYN I+ LC++ V+ +++ M P V+TYN +L CK
Sbjct: 459 EMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 518
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+ +++ M G N TY+++I+G+ G EA
Sbjct: 519 RIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEA 558
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 115/237 (48%), Gaps = 2/237 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S++++++C RD +E + ++ MK+ G Y +I + ++ ++ A+ L
Sbjct: 331 TYSILITTLC--RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M SDG PDIV Y VL + +A E+F +L +G P+ +YN + L
Sbjct: 389 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + MI M G PD ITYN+++ LC+ +++ EL+ +M+ ++ TY+
Sbjct: 449 DKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYN 508
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I++ G I +A +L+ + G + + I G+ G +A+EL +
Sbjct: 509 IVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++ M+++G D T + ++S +C R+ D+ + +M+ F +V Y V
Sbjct: 453 ALHMILEMVSNGIDPDEITYNSMISCLC--REGMVDKAFELLVDMRSCEFHPSVVTYNIV 510
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K ++ DA+ +L+ M +G +P+ YT+++ G+ +A EL ++L+ +
Sbjct: 511 LLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINA 570
Query: 273 VPD 275
+ +
Sbjct: 571 ISE 573
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRIAQ--SVFDAITKWGLRPSVVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 242 GLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG GD+ A + + + ++ I G
Sbjct: 302 HHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G A ++L++M + P AR + ++
Sbjct: 362 LCREGQSVDAEKMLREMLSVGLKPDARTYTMII 394
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 108/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG 172
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDAN 232
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 233 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A L+ +M+ K + P + L+
Sbjct: 293 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 324
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKI--DDANELFDEMLVKGLVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A L D
Sbjct: 247 SVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK +++ + M + ++ D + Y L+ LC+
Sbjct: 307 EMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+ ++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 367 QSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 2/208 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+++ A E+ + M+ G + T + ++ C+ + D + ++M ++
Sbjct: 226 SKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLI 283
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L KK + A ++++M G+KPD + YT +++G D A E +
Sbjct: 284 TYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRM 343
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ D Y I+GLC++ KM+ M +G KPD TY ++ CK ++
Sbjct: 344 IQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 403
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ +L+KEM+ G V ++ TY+++++G
Sbjct: 404 WKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 164/355 (46%), Gaps = 28/355 (7%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV--------------GFAIE 155
++F LI Y ++ +D++ F +++P V GF E
Sbjct: 67 YVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKE 126
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
IL C G+ ++++ C++ ++ + + K G +V + ++
Sbjct: 127 ILEC----GYPASLYFFNILMHRFCKEGEMRLAQ--SVFDAITKWGLRPSVVSFNTLMNG 180
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+K + + + N M++ G++PD+ Y++++NG+ + +A LF E+L GLVP+
Sbjct: 181 YIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPN 240
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+ I+G CK ++ + + M G PDV+TYNTL+ LCK +L + R L+
Sbjct: 241 GVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLD 300
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG+ + TY+ +IDG +GD+ A L E + + + ++ I GLCQ G
Sbjct: 301 EMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEG 360
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS-FIRLVDQILNTPC 449
A ++L++M + P + ++ K D S +R + + PC
Sbjct: 361 RAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPC 415
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A++I M+N GF D T + ++ +C++ DL L + EM + G +
Sbjct: 255 GRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYL--LDEMSRKGLKPDKI 312
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A + +M + I+ D V YT ++ G+ + V AE++ E+
Sbjct: 313 TYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREM 372
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L +GL PD TY + +N CK+ +V+ +++ M+ G P V+T
Sbjct: 373 LRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 150/307 (48%), Gaps = 18/307 (5%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F L+K R ++ L K+ + +R N V + +LN G C+ G T +L
Sbjct: 165 FTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGT-LLN-----GLCMTGNT---ML 215
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + L+ + GF +K +V Y +I SL K + + +MK G
Sbjct: 216 AVKLHEEMLNGNG--GFGVTIKP-----NLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG 268
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I PD+V Y+ +++G+ + A+ LF+E++ G+ P+V T+NV I+ LCK +E
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G PD TYNTL+ C ++ R+L M+ KGI + +Y+++I+G
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGY 388
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G ++EA L E + K + ++ + GL + G VR A L +M D++P +
Sbjct: 389 CKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPES 448
Query: 417 RVWEALL 423
+ LL
Sbjct: 449 CTYNILL 455
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 16/254 (6%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DGFC++G+ + + RDL FV M+ G V Y +I K ++
Sbjct: 351 DGFCLEGR--------IDDARDL-------FVS-MESKGIETDAVSYNVLINGYCKSGRM 394
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+A + +M I P ++ Y +L G+ + A LF E+ V L P+ TYN+
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNIL 454
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
++GLCK N++ +++ +E +P + +N L+ LCK R++ REL + +G+
Sbjct: 455 LDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGL 514
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
N+ TY++MI GL G + A L KG F+ + G CQ ++K +E
Sbjct: 515 EPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVE 574
Query: 403 LLKQMADKDVSPGA 416
LL++MA+KD SP A
Sbjct: 575 LLQEMAEKDFSPDA 588
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 6/241 (2%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+++ + M +G + +I KV L +L +M G P+ V +T ++
Sbjct: 110 DVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLV 169
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS- 307
G+ + +A L +++ +G P+V TY +NGLC N +K+ M
Sbjct: 170 KGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGG 229
Query: 308 -----KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
KP+++ Y T++ +LCK +++ +EL EMK +GI ++ YS +I G+ G
Sbjct: 230 FGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRW 289
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A GL E +++G+ F+ I LC+ G + +A LLK M + SP + L
Sbjct: 290 EGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTL 349
Query: 423 L 423
+
Sbjct: 350 I 350
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A + N + P I + +L V + Y L+ + ++GL PD T N+ I
Sbjct: 75 EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILI 134
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N C N V+ G+ ++ M G P+ +T+ +L++ LC ++ L+++M G
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC------GLCQRGLV 397
N+ TY +++GL G+ + A L EE LN ++ +C LC+ GL+
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254
Query: 398 RKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
K EL +M + +SP + +++ + + + F +VD+
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDE 302
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%)
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
G EM G +V + +I +L K K+ +A +L M G PD Y +++G
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
++ A +LF + G+ D +YNV ING CK + K+ M P V
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
ITYNTLL L + ++ L EMK + TY+I++DGL + EA L
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY 473
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
N +F+ I GLC+ + A EL +++ + + P + ++
Sbjct: 474 LENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMI 525
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 186/417 (44%), Gaps = 59/417 (14%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+ Y+ I L +F I +L + K E E IF+ ++K Y A + ++ L
Sbjct: 113 DVYYVFINKLGAIGKFKLIDKLLMQM-KEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLL 171
Query: 141 KI-------PKFRINRVGFAIEIL---NC----------MINDGFCVDGKTCSLILSSVC 180
+ P F+ +EIL NC M++ G T +++ ++C
Sbjct: 172 DMRAVYLCEPTFK--SYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALC 229
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
++ D +++M K G + Y +I +L +K +V +AL +L +M G PD
Sbjct: 230 MFNEV--DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPD 287
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM-- 298
+ + V++G+ A +L D +L+ G PD TY ++GLC+ + K+
Sbjct: 288 VQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILI 347
Query: 299 -IAC-----------------------------MEELGSKPDVITYNTLLQALCKVRELN 328
I C M G +PD+ TYN L+ LCK L+
Sbjct: 348 KIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS 407
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R+LV EM +G N+ TY+I+++GL G + EA +L E +GL S +++ I
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
C LC++ V AL LL +M K P + +L+ + K+D ++ +F RL +L
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY-GLCKVDRIDEAF-RLFHNML 522
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 142/274 (51%), Gaps = 2/274 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+ FA +++N M G + T +++++ +C+ L L+ + EM G V Y
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV--LHEMSARGLTINSVIY 463
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I +L +KEKV AL +L++M + G KPD+ Y ++ G+ + +A LF +L+
Sbjct: 464 NCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLL 523
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G V + TYN I+ L ++ + + ++ M G D ITYN L++A CKV + +
Sbjct: 524 DGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEK 583
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL ++M G+ + + +IMI+GL G + A L +A+N+G ++ +
Sbjct: 584 GLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLN 643
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G +++AL L ++ + V P A + +
Sbjct: 644 GLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 175/409 (42%), Gaps = 50/409 (12%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL + + C P Y +I L++ +Q +S L +E+ +F+ +
Sbjct: 239 SLLRDMTKHGCVPNSIVYQTLIHALSQKNQ---VSEALKLLEE---------MFV--MGC 284
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
D F D ++ K+ N++ A ++++ M+ GF D T +L +C L
Sbjct: 285 MPDVQTFNDVIHGLCKV-----NKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339
Query: 186 SS-----------------------------DELLGFVQE-MKKLGFCFGMVDYTNVIRS 215
+ E F+ E M GF + Y ++
Sbjct: 340 NEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHG 399
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K+ + A ++N+M G +P+++ Y +++NG+ +A + E+ GL +
Sbjct: 400 LCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTIN 459
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
YN I LC++ V + +++ M G KPD+ TYN+L+ LCKV ++ L
Sbjct: 460 SVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFH 519
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M G V N TY+ +I L +G +A L+ + L +G ++ I C+ G
Sbjct: 520 NMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVG 579
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ K LEL +QM D + ++++ + K+ V+ +F L D I
Sbjct: 580 NIEKGLELYEQMI-MDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAI 627
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 112/263 (42%), Gaps = 26/263 (9%)
Query: 201 GFCFGMVDYTNVIRSL--VKKEKVFDALGILNQMKSDGI--KPDIVCYTMVLNGVIVQED 256
G+C Y I L + K K+ D L L QMK +GI + I +I+ +
Sbjct: 107 GYCHTFDVYYVFINKLGAIGKFKLIDKL--LMQMKEEGIVFRESIF--------MIIMKH 156
Query: 257 YVKAEE-------LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
Y KA + L D V P +Y++ + L N + + M G P
Sbjct: 157 YGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSP 216
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
V T+ +++ALC E++ L+++M G V N Y +I L+ K + EA LL
Sbjct: 217 TVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLL 276
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSV 427
EE G F++ I GLC+ + A +L+ +M + P + LL L +
Sbjct: 277 EEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRI 336
Query: 428 SKLDFVNTSFIRLV---DQILNT 447
KL+ I++ + ILNT
Sbjct: 337 GKLNEARKILIKIPCPNNAILNT 359
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 142/284 (50%), Gaps = 2/284 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
+ N MI G T ++++ +C++ DL + L FVQ M+++G +V Y ++I
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL-FVQ-MREMGLSPDVVTYNSLID 273
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
K + + + N+MK G PDI+ Y ++N E +A E F E+ GL P
Sbjct: 274 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 333
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+V TY+ I+ CK+ ++ IK++ M G P+ TY +L+ A CK L +L+
Sbjct: 334 NVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLL 393
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M G+ LN+ TY+ ++DGL G +IEA + L G+ ++ + G +
Sbjct: 394 NDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKA 453
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
+ A+++LKQM + ++ P ++ +++ S+ T I
Sbjct: 454 ERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 497
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 139/285 (48%), Gaps = 10/285 (3%)
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
F K+P+ A E + M N+G + T S ++ + C++ + + + +M+
Sbjct: 313 FEKMPR--------AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGA--IKLLXDMR 362
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
+ G YT++I + K + +A +LN M G+K +IV YT +L+G+ +
Sbjct: 363 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 422
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+AEE+F +L G+ P+ Y ++G K +E +K++ M E KPD+I Y +++
Sbjct: 423 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 482
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
C R+L + +++EMK +GI N + +ID G +A +E + G+
Sbjct: 483 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 542
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ G+V A++ +M + P V+ +L+
Sbjct: 543 ATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 39/298 (13%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A ++LN M+ G ++ T + +L +C+ R + ++E+ + M K G YT
Sbjct: 389 AWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF---RSMLKDGISPNQQVYTA 445
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG-----------VIVQE----- 255
++ +K E++ DA+ IL QM IKPD++ Y ++ G +I++E
Sbjct: 446 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505
Query: 256 -------------DYVKAEE------LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
Y KA + F E+ +G+ + TY V I+GLC+ VE +
Sbjct: 506 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAV 565
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
M LG +P+V Y +L+ LC + ++L EM+ +G+ ++ ++ +IDG
Sbjct: 566 DYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGN 625
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G++ EA L+ + ++ + G Q G + +A + +M +K + P
Sbjct: 626 LKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 683
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A E F + +P + N ++ L K N + K M G P V TYN ++
Sbjct: 178 EANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMI 237
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCK +L R L +M+ G+ ++ TY+ +IDG G + E L E + G
Sbjct: 238 DYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCV 297
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I C+ + +A E +M + + P + L+
Sbjct: 298 PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 342
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 21/264 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
N +P Y +I + + +L+ ++ R P I +I Y A + D
Sbjct: 470 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP-VISTTIIDAYFKAGKSSD 528
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
++N F ++ + A + C++ DG C G +L+ D +
Sbjct: 529 ALNFFQEMQDVGVE----ATIVTYCVLIDGLCEAGIV------------ELAVD----YF 568
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
M LG + YT++I L + A + ++M+ G+ PDI +T +++G +
Sbjct: 569 CRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKH 628
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A L + L + D++ Y ++G + + K M E G P+ +
Sbjct: 629 GNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLC 688
Query: 315 NTLLQALCKVRELNRLRELVKEMK 338
LL+ K +L+ EL EM+
Sbjct: 689 ICLLREYYKRGQLDEAIELKNEME 712
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 3/264 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
FR ++ A L+ MI GF D TC+LILS++CE + + + + ++M LGF
Sbjct: 251 FRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLV--NRAIWYFRKMIDLGFKP 308
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++++T++I L KK + A +L +M +G KP++ +T +++G+ + KA LF
Sbjct: 309 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 368
Query: 265 DELLVLGLV-PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+L+ + P+V+TY I G CK++ + + + M+E G P+V TY TL+ CK
Sbjct: 369 LKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 428
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+R EL+ M +G N+ TY+ +ID L K EA LL +A + GL
Sbjct: 429 AGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 488
Query: 384 FDETICGLCQRGLVRKALELLKQM 407
+ I C++ +++AL +M
Sbjct: 489 YTILIQEQCKQSDIKQALAFFCRM 512
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 8/247 (3%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++ C++ L+ E+L MK+ G + YT +I K A ++N
Sbjct: 383 TYTSMIGGYCKEDKLNRAEML--FSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMN 440
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M +G +P+I Y V++ + + +A EL ++ GL D TY + I CKQ+
Sbjct: 441 LMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQS 500
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQ 347
+++ + M + G + D+ N L+ A C K++E RL +LV + G+V +
Sbjct: 501 DIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL---GLVPTKE 557
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ MI G +GD A G S + I GLC++ +V +A +L + M
Sbjct: 558 TYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 617
Query: 408 ADKDVSP 414
D+ +SP
Sbjct: 618 IDRGLSP 624
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 3/237 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++R+ + ++ +A+G++ M++ G+ P + VL I AE +FDE+ V G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD ++ + + G + ++ + ++ M + G PD T +L ALC+ +NR
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
++M G NL ++ +IDGL KG I +A +LEE + G I GL
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355
Query: 392 CQRGLVRKALELLKQMADKDV-SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
C+RG KA L ++ D+ P + +++ KL+ F R+ +Q L
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 412
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 180 CEQRDLSS----DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
C R+ S +E +G V +M+ G + V+ ++ + A + ++M
Sbjct: 175 CMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVR 234
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ PD + +++ G +A+ ++ G +PD T + ++ LC+ V
Sbjct: 235 GVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRA 294
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
I M +LG KP++I + +L+ LCK + + E+++EM G N+ T++ +IDG
Sbjct: 295 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 354
Query: 356 LASKGDIIEACGLLEEALNKGLCTQS-SMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L +G +A L + + + + + I G C+ + +A L +M ++ + P
Sbjct: 355 LCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 414
Query: 415 GARVWEALL 423
+ L+
Sbjct: 415 NVNTYTTLI 423
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 2/176 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R A E+LN + G DG T ++++ C+Q D+ + L F M K GF M
Sbjct: 465 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIK--QALAFFCRMNKTGFEADMR 522
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+I + +++K+ ++ + + S G+ P YT +++G + D+ A + F +
Sbjct: 523 LNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNM 582
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
G VPD +TY I+GLCK++ V+ K+ M + G P +T TL CK
Sbjct: 583 KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 638
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 159 CMIND-GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
C +N GF D + ++++++ C Q+ + E L Q + LG YT++I
Sbjct: 510 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERL--FQLVVSLGLVPTKETYTSMISGYC 567
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K+ AL + MK G PD Y +++G+ + +A +L++ ++ GL P
Sbjct: 568 KEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEV 627
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
T CK+N+ + + + +E L K + T TL++ LC +++
Sbjct: 628 TRVTLAYEYCKRNDSASAMIV---LEPLDKKLWIRTVRTLVRKLCSEKKV 674
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 2/226 (0%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM G ++ Y+ +I S + + DA +L M I PD+V ++ ++N ++ +
Sbjct: 101 EMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEG 160
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+AEE++ ++L G+ P TYN I+G CKQ+ + +M+ M PDV+T++
Sbjct: 161 KVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFS 220
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ CK + ++ E+ EM +GIV N TY+ +I G GD+ A LL ++
Sbjct: 221 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISS 280
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
G+ F + LC + +RKA +L+ + +V P R+ +A
Sbjct: 281 GVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCP--RIVQA 324
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 6/282 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+ +++ M+ +G G I++ +C+ D S L + +M++ +V
Sbjct: 24 GRVLQALALVDRMVEEGHQPYGT----IINGLCKMGDTES--ALNLLSKMEETHIKAHVV 77
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L K A + +M GI PD++ Y+ +++ + AE+L ++
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + PDV T++ IN L K+ V ++ M G P ITYN+++ CK L
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
N + ++ M K ++ T+S +I+G + + E +G+ + +
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
I G CQ G + A +LL M V+P ++++L S SK
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK 299
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M G +PD+V +T ++NG+ + ++A L D ++ G P Y INGLCK +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
E+ + +++ MEE K V+ YN ++ LCK + L EM KGI ++ TYS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
MID G +A LL + + + + F I L + G V +A E+ M +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 412 VSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+ P + + ++ K D +N + R++D + + C
Sbjct: 177 IFPTTITYNS-MIDGFCKQDRLNDA-KRMLDSMASKSC 212
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 119/218 (54%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I SL K + V DA + ++M + I PD+V + ++ G V +A LF
Sbjct: 199 VVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFH 258
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+++ + PDVYT+++ ++ LCK N+ M+A M + G PDV+TY++L+ C V
Sbjct: 259 EMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVN 318
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+N+ + + M G+ + +Y+IMI+GL + EA L +E KG+ + ++
Sbjct: 319 EVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYN 378
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G + A +L+ +M + + + +L+
Sbjct: 379 SLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLI 416
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 135/256 (52%), Gaps = 2/256 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T S+++ ++C+ +++ + + M K G +V Y++++ +V A
Sbjct: 268 DVYTFSILVDALCKDGNITRAK--NMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKH 325
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ + M G+ P Y +++NG+ + +A LF E+ G+ PD TYN I+GLC
Sbjct: 326 VFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLC 385
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + +++ M G D++TYN+L+ LCK +++ LVK++K +GI ++
Sbjct: 386 KLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMY 445
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I+IDGL G + A + ++ L KG + ++ I GLC+ GL +A LL +M
Sbjct: 446 TYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKM 505
Query: 408 ADKDVSPGARVWEALL 423
+ + P A +E ++
Sbjct: 506 ENNGIIPDAVTYETII 521
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 146/301 (48%), Gaps = 4/301 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ + FA I ++ G+ T + +++ +C L E L F + LGF
Sbjct: 106 HLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLK--EALHFHDHVIALGFHLD 163
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I L K + AL +L +++ + D+V Y +++N + + A +L+
Sbjct: 164 QVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYS 223
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ + PDV T+N I G C ++ + M PDV T++ L+ ALCK
Sbjct: 224 EMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDG 283
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ R + ++ M +G++ ++ TYS ++DG ++ +A + G+ + ++
Sbjct: 284 NITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYN 343
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
I GL + +V +AL L K+M K ++P + + L+ + KL ++ ++ +LVD++
Sbjct: 344 IMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNS-LIDGLCKLGRISYAW-QLVDEMH 401
Query: 446 N 446
N
Sbjct: 402 N 402
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Query: 206 MVDYTNVIRSLVK--KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V++ ++ S+VK A+ + +Q++ GI P IV + +++N + A +
Sbjct: 57 IVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSI 116
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F ++L LG P T+N ING+C ++ + + LG D ++Y TL+ LCK
Sbjct: 117 FAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCK 176
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ E +++K+++ K + ++ Y+I+I+ L + +A L E + K +
Sbjct: 177 IGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVT 236
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F+ I G C G +++A L +M K+++P + L+
Sbjct: 237 FNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 5/271 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
IL S+ + + + +++ G +V + ++ ++ A I ++
Sbjct: 63 ILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILK 122
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P + + ++NG+ + +A D ++ LG D +Y INGLCK A
Sbjct: 123 LGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRA 182
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++M+ +E DV+ YN ++ +LCK + ++ +L EM K I ++ T++ +I
Sbjct: 183 ALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLIL 242
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G G + EA GL E + K + F + LC+ G + +A +L M + V P
Sbjct: 243 GFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIP 302
Query: 415 GARVWEAL-----LLSSVSKLDFVNTSFIRL 440
+ +L L++ V+K V ++ RL
Sbjct: 303 DVVTYSSLMDGYCLVNEVNKAKHVFSTMSRL 333
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 2/199 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I V A+ + M G D T + ++ +C+ +S L V EM G
Sbjct: 351 KIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQL--VDEMHNNGIPAD 408
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y ++I L K + A+ ++ ++K GI+P + Y ++++G+ A+++F
Sbjct: 409 ILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQ 468
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+LL+ G + +TYN+ INGLCK+ +++ ME G PD +TY T+++AL +
Sbjct: 469 DLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKD 528
Query: 326 ELNRLRELVKEMKWKGIVL 344
E + +L++EM +G++L
Sbjct: 529 ENEKAEKLLREMIIRGLLL 547
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+N V A + + M G + +++++ + + + + DE L +EM G
Sbjct: 317 VNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMV--DEALSLFKEMCCKGIAPDT 374
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K ++ A ++++M ++GI DI+ Y +++ + KA L +
Sbjct: 375 VTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKK 434
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ P +YTYN+ I+GLCK ++ + + G + TYN ++ LCK
Sbjct: 435 IKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGL 494
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
N L+ +M+ GI+ + TY +I L K + +A LL E + +GL
Sbjct: 495 FNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 141/279 (50%), Gaps = 5/279 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A+ ++N M+ G D + I+ S+C+ + + L +M+ G +V
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV--NYALSLFDQMENYGIRPDVV 213
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT+++ L + DA +L M IKPD++ + +++ + + ++ AEEL++E+
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + + P+++TY ING C + V+ +M ME G PDV+ Y +L+ CK +++
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++ EM KG+ N TY+ +I G G A + +++G+ ++
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 388 ICGLCQRGLVRKALELLKQMADKD---VSPGARVWEALL 423
+ LC G V+KAL + + M ++ V+P + LL
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 147/316 (46%), Gaps = 13/316 (4%)
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
F +N+ K+ KF + I + + + G D TC+L+++ C+ SS L
Sbjct: 75 FTKLLNVIAKMKKFDV-----VINLCDHLQIMGVSHDLYTCNLLMNCFCQ----SSQPYL 125
Query: 192 G--FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
F+ +M KLGF +V +T++I ++ +A+ ++NQM GIKPD+V YT +++
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
+ A LFD++ G+ PDV Y +NGLC ++ M + KP
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DVIT+N L+ A K + EL EM I N+ TY+ +I+G +G + EA +
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSV 427
KG + I G C+ V A+++ +M+ K ++ + L+ V
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 428 SKLDFVNTSFIRLVDQ 443
K + F +V +
Sbjct: 366 GKPNVAQEVFSHMVSR 381
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 164/353 (46%), Gaps = 28/353 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
SL Y P Y ++ L + ++ D S+L + KR+ P+ I F LI
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK--IKPDVITFNALID 255
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ +F D+ L+ ++ + I F L IN GFC++G V E R
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL---IN-GFCMEG--------CVDEARQ 303
Query: 185 LSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+ ++ E K CF +V YT++I K +KV DA+ I +M G+ + +
Sbjct: 304 MF------YLMETKG---CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT ++ G A+E+F ++ G+ P++ TYNV ++ LC V+ + + M+
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 304 EL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ G P++ TYN LL LC +L + + ++M+ + + + + TY+I+I G+ G
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG 474
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ A L +KG+ + I GL + GL +A L ++M + VS
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 4/235 (1%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
FC +Y ++R+ + + +AL + M P I+ +T +LN + + +
Sbjct: 36 AFC----NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVV 91
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L D L ++G+ D+YT N+ +N C+ + + M +LG +PD++T+ +L+
Sbjct: 92 INLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLING 151
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C + +V +M GI ++ Y+ +ID L G + A L ++ N G+
Sbjct: 152 FCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
M+ + GLC G R A LL+ M + + P + AL+ + V + F++
Sbjct: 212 VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++D+T ++ + K +K + + + ++ G+ D+ +++N A
Sbjct: 72 IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ LG PD+ T+ ING C N +E + M+ M E+G KPDV+ Y T++ +LCK
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N L +M+ GI ++ Y+ +++GL + G +A LL + + F+
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G A EL +M ++P + +L+
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 159/352 (45%), Gaps = 28/352 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET-PEFI-FIDLIKTYADAHRFQD 134
+P Y +I +L +N ++ L ++ EN+ P+ + + L+ ++ R++D
Sbjct: 174 KPDVVMYTTIIDSLCKNGH---VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ +L + K +I + N +I D F +GK L ++EL
Sbjct: 231 ADSLLRGMTKRKIKP---DVITFNALI-DAFVKEGKF-------------LDAEELY--- 270
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM ++ + YT++I + V +A + M++ G PD+V YT ++NG
Sbjct: 271 NEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ A ++F E+ GL + TY I G + ++ + M G P++ TY
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 315 NTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
N LL LC KV++ + E +++ + G+ N+ TY++++ GL G + +A + E+
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + I G+C+ G V+ A+ L + K V P + ++
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 111 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRIAQ--SVFDAITKWGLRPSVVSYN 164
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 165 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVK 224
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 225 GLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 284
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG GD+ A + + + ++ I G
Sbjct: 285 HHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISG 344
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G A ++L++M + P AR + ++
Sbjct: 345 LCREGXSVDAEKMLREMLSVGLKPDARTYTMII 377
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 108/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWG 155
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDAN 215
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 216 ELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A L+ +M+ K + P + L+
Sbjct: 276 CKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 307
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKI--DDANELFDEMLVKGLVPN 229
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A L D
Sbjct: 230 SVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLID 289
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK +++ + M + ++ D + Y L+ LC+
Sbjct: 290 EMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREG 349
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 350 XSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 400
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 2/208 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+++ A E+ + M+ G + T + ++ C+ + D + ++M ++
Sbjct: 209 SKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLI 266
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L KK + A ++++M G+KPD + YT +++G D A E +
Sbjct: 267 TYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRM 326
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ D Y I+GLC++ KM+ M +G KPD TY ++ CK ++
Sbjct: 327 IQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDV 386
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ +L+KEM+ G V ++ TY+++++G
Sbjct: 387 WKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 163/348 (46%), Gaps = 22/348 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S P Y+ +I L++ + + S+ L I+ R + F I Y
Sbjct: 495 LLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR-GLKPDAVTFGAFILGY 553
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ + ++ F + M++ G + +++++ + +L
Sbjct: 554 SKTGKMTEAAKYFDE------------------MLDHGLMPNNPLYTVLINGHFKAGNLM 595
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E L + + LG + + I L+K +V +AL + +++K G+ PD+ Y+
Sbjct: 596 --EALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 653
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G Q + KA EL DE+ + G+ P+++ YN ++GLCK +++ K+ M E G
Sbjct: 654 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 713
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+PD +TY+T++ CK + L EM KG+ + Y+ ++ G +GD+ +A
Sbjct: 714 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 773
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L E L KG T S F+ I G C+ +++A +L ++M K + P
Sbjct: 774 NLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMP 820
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 8/265 (3%)
Query: 167 VDGKTCSLILSSV--------CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
+DG +CS + + C + +E ++ E++ G V + I K
Sbjct: 496 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 555
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
K+ +A ++M G+ P+ YT+++NG + ++A +F L LG++PDV T
Sbjct: 556 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQT 615
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+ +I+GL K V+ +K+ + ++E G PDV TY++L+ CK E+ + EL EM
Sbjct: 616 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC 675
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KGI N+ Y+ ++DGL GDI A L + KGL S + I G C+ V
Sbjct: 676 LKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 735
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A L +M K V P + V+ AL+
Sbjct: 736 EAFSLFHEMPSKGVQPHSFVYNALV 760
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 4/270 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
SL++ +C+ D+ DE + + M + G YT + L + +++ +A +M
Sbjct: 267 SLVIEGMCQVGDI--DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM 324
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ G+KPD + +++G + + D + + D ++ G+ ++ TYNV I+GLCK +
Sbjct: 325 QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKM 384
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
E +++ M LG KP+ T+ L++ C+ + R EL+ EM+ + +V + +Y M
Sbjct: 385 EKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 444
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+GL D+ A LLE+ GL ++ I G + +A LL M+ V
Sbjct: 445 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGV 504
Query: 413 SPGARVWEALL--LSSVSKLDFVNTSFIRL 440
+P + A++ LS K++ +T + +
Sbjct: 505 APDIFCYNAIISCLSKAGKMEEASTYLLEI 534
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ A M G D CS ++ + D+ DE+L M G
Sbjct: 310 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI--DEVLRIKDVMVSCGIPIN 367
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I L K K+ A IL M + G KP+ + +++ G + + +A EL D
Sbjct: 368 LITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLD 427
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ LVP +Y INGLC ++ K++ M G KP+V+ Y+ L+ A
Sbjct: 428 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEG 487
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ R L+ M G+ ++ Y+ +I L+ G + EA L E +GL + F
Sbjct: 488 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 547
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G + +A + +M D + P ++ L+
Sbjct: 548 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 585
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 148/300 (49%), Gaps = 6/300 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M G + T ++I + +C + ++ +L +EM+K G + +
Sbjct: 282 AVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT--FEEMQKTGLKPDYNACSAL 339
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +++ + + L I + M S GI +++ Y ++++G+ KA E+ ++ LG
Sbjct: 340 IDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGC 399
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ T+ + I G C+++N+ ++++ ME+ P ++Y ++ LC ++L+ +
Sbjct: 400 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANK 459
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+++M + G+ N+ YSI+I AS+G I EA LL+ G+ ++ I L
Sbjct: 460 LLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 519
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLL--SSVSKLDFVNTSFIRLVDQIL--NTP 448
+ G + +A L ++ + + P A + A +L S K+ F ++D L N P
Sbjct: 520 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 579
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%)
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
F + YT ++ +L K + A +L +M G+ P+ Y++V+ G+ D +A EL
Sbjct: 226 FDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVEL 285
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+ GLVP+ YTY + GLC+ + M++ G KPD + L+ +
Sbjct: 286 KRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 345
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+++ + + M GI +NL TY+++I GL G + +A +L+ + G S
Sbjct: 346 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRT 405
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F I G C+ + +ALELL +M +++ P A + A++
Sbjct: 406 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMI 445
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++ N M++ D T + ++ ++C+ DL + + + EM + G Y+ VI
Sbjct: 214 KVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRV--LIEMDEKGLNPNEFIYSLVIE 271
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+ + + +A+ + M G+ P+ YT++ G+ + +A+ F+E+ GL P
Sbjct: 272 GMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKP 331
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D + I+G ++ +++ +++ M G ++ITYN L+ LCK ++ + E++
Sbjct: 332 DYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEIL 391
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
K M G N +T+ ++I+G + ++ A LL+E + L + + I GLC
Sbjct: 392 KGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC 451
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ A +LL++M + P V+ L+++ S+
Sbjct: 452 KDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASE 486
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 36/254 (14%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ +I K E V +A + ++M S G++P Y +++G + D KA LF E
Sbjct: 719 VTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 778
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L G + ++N I+G CK ++ ++ M PD +TY T++ CK +
Sbjct: 779 MLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 837
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDG----------------LASKG---------- 360
+ L KEM+ + ++++ TY+ ++ G + +KG
Sbjct: 838 MEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGL 897
Query: 361 ---------DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+++EA L +E + KG+ T+ ++ D I LC+R + +A +LL +M +
Sbjct: 898 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 957
Query: 412 VSPGARVWEALLLS 425
+ P L+ S
Sbjct: 958 LKPSLAACNTLVRS 971
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 140/316 (44%), Gaps = 29/316 (9%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y +I ++ + S+ H + + F++ L+ + ++
Sbjct: 715 EPDSVTYSTMIDGYCKSENVAEAFSLF-HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 773
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFC---------------------VDGKTCSLI 175
NLF ++ + GFA + + DG+C D T + +
Sbjct: 774 NLFREMLQ-----KGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 828
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ C+ + LL +EM++ V YT+++ K + + + +M +
Sbjct: 829 IDWHCKAGKMEEANLL--FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 886
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+KPD V Y +V+ +++ V+A +L DE++ G++ +++ I LCK+ ++
Sbjct: 887 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 946
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
K++ M ELG KP + NTL+++ + +++ + + +K G+V + T +++G
Sbjct: 947 SKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006
Query: 356 LASKGDIIEACGLLEE 371
+ D +A L+++
Sbjct: 1007 NLNDTDSEDARNLIKQ 1022
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 67/151 (44%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S E+ ++M G V Y VI + K++ + +A + +++ G+ + +
Sbjct: 873 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 932
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ + +ED +A +L DE+ LGL P + N + + ++ ++ ++ LG
Sbjct: 933 LITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLG 992
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEM 337
PD T L+ + R L+K++
Sbjct: 993 LVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + ++ G G L+++++C++ DL+ E + EM +LG + +
Sbjct: 911 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT--EASKLLDEMGELGLKPSLAACNTL 968
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+RS + K+ +A + +KS G+ PD ++NG + D A L +L+
Sbjct: 969 VRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 154/310 (49%), Gaps = 8/310 (2%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
DA F +N K+ KF A+E + G T + I++ +C+ + ++
Sbjct: 164 DAVTFNTLINGLCKVGKF-----AQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTA 218
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
G ++M++ G +V Y +I SL K + V +AL I + MK+ I PDI Y +
Sbjct: 219 AA--GLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSL 276
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G+ + +A L +E+ L ++P+++T+NV ++ +CK+ V + M E+G
Sbjct: 277 IQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGV 336
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDV+TY++L+ E+ R+L M KG + +Y+I+I G I EA
Sbjct: 337 EPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQ 396
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L E +++GL + ++ I GLCQ G +R+A +L K M P + ++LL
Sbjct: 397 LFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY-SMLLDGF 455
Query: 428 SKLDFVNTSF 437
K ++ +F
Sbjct: 456 CKEGYLGKAF 465
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 138/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++I + M D T + ++ +C R E + EM L + + +
Sbjct: 254 ALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWK--EASALLNEMTSLNIMPNIFTFNVL 311
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ ++ K+ KV +A G+ M G++PD+V Y+ ++ G ++ + V+A +LFD ++ G
Sbjct: 312 VDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGC 371
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD ++YN+ I G CK ++ ++ M G PD + YNTL+ LC++ L ++
Sbjct: 372 KPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQD 431
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K M G + +L TYS+++DG +G + +A L + L +M++ I +C
Sbjct: 432 LFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMC 491
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++ A +L ++ + + P +++ ++
Sbjct: 492 KFGNLKDARKLFSELFVQGLLPNVQIYTTII 522
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 155/341 (45%), Gaps = 23/341 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQ 133
C+P Y+ +I +L ++ + + +++ + +P+ F + LI+ + R++
Sbjct: 230 GCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKR--ISPDIFTYNSLIQGLCNFRRWK 287
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++ L ++ I F +L D C +GK E G
Sbjct: 288 EASALLNEMTSLNIMPNIFTFNVLV----DAICKEGKV----------------SEAQGV 327
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ M ++G +V Y++++ + ++ +A + + M + G KPD Y +++ G
Sbjct: 328 FKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCK 387
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ +A++LF+E++ GL PD YN I+GLC+ + + M G+ PD+ T
Sbjct: 388 AKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFT 447
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y+ LL CK L + L + M+ + ++ Y+I+ID + G++ +A L E
Sbjct: 448 YSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELF 507
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+GL ++ I LC+ GL+ +ALE + M P
Sbjct: 508 VQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPP 548
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 1/201 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-ELFDELLVLGLVPDVYTYNVY 282
DAL N M P I+ +T +L+ ++ Y A L ++ + GL PD+YT ++
Sbjct: 77 DALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSIL 136
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+ V+ + + M +LG +PD +T+NTL+ LCKV + + E + + G
Sbjct: 137 IDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGC 196
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ TY+ +I+GL G+ A GL ++ G ++ I LC+ LV +AL+
Sbjct: 197 QPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALD 256
Query: 403 LLKQMADKDVSPGARVWEALL 423
+ M K +SP + +L+
Sbjct: 257 IFSYMKAKRISPDIFTYNSLI 277
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A+ + I DGF D T + ++ +C+ + L + M + G
Sbjct: 171 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG--HALKVMDVMVQEGHDPD 228
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y V+ L K ++ +A GILNQM G PDI + ++ + +A +L
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ V G+ PDVYT+N+ IN LCK + +++ M+ G PD +TYNTL+ LC +
Sbjct: 289 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 348
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + +L+K+M+ G + TY+ +IDGL K I EA + ++ +G+ + F+
Sbjct: 349 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 408
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ + A EL+ QM + + P + ++L
Sbjct: 409 TLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSIL 446
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 134/263 (50%), Gaps = 4/263 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++V A+ +L M + G D T + ++ E+ + + L M ++G
Sbjct: 101 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEA--ALRVKARMLEMGCSAT 158
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV-KAEELF 264
V +I K +V DALG + Q +DG +PD + Y +NG + Q D+V A ++
Sbjct: 159 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG-LCQNDHVGHALKVM 217
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
D ++ G PDV+TYN+ +N LCK +E ++ M + G PD+ T+NTL+ ALC
Sbjct: 218 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 277
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L +L +++ KG+ ++ T++I+I+ L GD A L EE N G +
Sbjct: 278 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 337
Query: 385 DETICGLCQRGLVRKALELLKQM 407
+ I LC G + KAL+LLK M
Sbjct: 338 NTLIDNLCSLGKLGKALDLLKDM 360
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 135/261 (51%), Gaps = 2/261 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ VG A+++++ M+ +G D T +++++ +C+ L +E G + +M G +
Sbjct: 208 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL--EEAKGILNQMVDRGCLPDIT 265
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I +L ++ +AL + Q+ G+ PD+ + +++N + D A LF+E+
Sbjct: 266 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 325
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G PD TYN I+ LC + + ++ ME G ITYNT++ LCK +
Sbjct: 326 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 385
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
E+ +M +GI N T++ +IDGL I +A L+ + +++GL + ++
Sbjct: 386 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSI 445
Query: 388 ICGLCQRGLVRKALELLKQMA 408
+ C++G ++KA ++L+ M
Sbjct: 446 LTHYCKQGDIKKAADILETMT 466
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 161/345 (46%), Gaps = 23/345 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDS 135
+P Y+ V+ L +N Q + +L+ + R P+ F LI +R +++
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL--PDITTFNTLIAALCTGNRLEEA 283
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
++L ++ G D T +++++++C+ D L +
Sbjct: 284 LDLARQVTV------------------KGVSPDVYTFNILINALCKVGD--PHLALRLFE 323
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EMK G V Y +I +L K+ AL +L M+S G + Y +++G+ +
Sbjct: 324 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 383
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+AEE+FD++ + G+ + T+N I+GLCK ++ ++I M G +P+ ITYN
Sbjct: 384 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 443
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++L CK ++ + ++++ M G +++ TY +I+GL G A +L K
Sbjct: 444 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 503
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
G+ ++ + L +R +R AL L ++MA+ P A ++
Sbjct: 504 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 548
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 131/254 (51%), Gaps = 2/254 (0%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM G +V + ++++L + +V A+ +L +M S G+ PD +T ++ G + +
Sbjct: 79 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEG 138
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A + +L +G T NV ING CK VE + I G +PD ITYN
Sbjct: 139 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 198
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
T + LC+ + +++ M +G ++ TY+I+++ L G + EA G+L + +++
Sbjct: 199 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 258
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
G + F+ I LC + +AL+L +Q+ K VSP + +L++++ K+ +
Sbjct: 259 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN-ILINALCKVGDPHL 317
Query: 436 SFIRLVDQILNTPC 449
+ +RL +++ N+ C
Sbjct: 318 A-LRLFEEMKNSGC 330
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 228 ILNQMKS-DGIKPDIVCYTMVLNGVIVQEDYVKA-EELFDELLVLGLVPDVYTYNVYING 285
ILNQ++ GI+ D V Y +LN V+V+ +K E ++ E+ G+ PDV T+N +
Sbjct: 40 ILNQLQPLFGIQADTVVYNHLLN-VLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 98
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LC+ + V + M+ M G PD T+ TL+Q + + + M G
Sbjct: 99 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 158
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
T +++I+G G + +A G +++ + G ++ + GLCQ V AL+++
Sbjct: 159 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 218
Query: 406 QMADKDVSP 414
M + P
Sbjct: 219 VMVQEGHDP 227
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 188/402 (46%), Gaps = 34/402 (8%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
+C+P + +++ L ++Q +L + K + I+ LI Y+ A F
Sbjct: 37 SCQPDAFTFAILLRGLCRSNQLEKARKLLGRM-KEMGCVPDDAIYNALISGYSKAKDFGQ 95
Query: 135 SVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+ ++ K + R A+++L+ M + G + T ++I+
Sbjct: 96 AFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVE 155
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+CE+R L DE ++EM G+ +V Y + I+ L K ++V +A L +M +
Sbjct: 156 GLCEERKL--DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---V 210
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PD+V YT V+NG+ D A + D + G PDV TY+ I+G CK VE +
Sbjct: 211 TPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMG 270
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M +LG +P+++ YN+LL AL ++ + + +++ EM+ +G ++ +Y+ IDGL
Sbjct: 271 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 330
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETIC----------GLCQRGLVRKALELLKQM 407
+ +A + + + +G +S + I GLC+ G +A L ++
Sbjct: 331 KAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKV 390
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
D+ + + ++L S K ++ + +++ Q+L C
Sbjct: 391 LDEKICEPDVFFYNVMLDSHCKRRQIDKA-LQIHKQMLEKNC 431
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 169/387 (43%), Gaps = 31/387 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
LL C P Y+ +++ L E + + +L+ + R F P+ + + IK
Sbjct: 134 LLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF--PDVVTYNSFIKG 191
Query: 126 YADAHRFQDSVNLFYKIPKF--------------RINRVGFAIEILNCMINDGFCVDGKT 171
R ++ ++P + + A +L+ M N G D T
Sbjct: 192 LCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVT 251
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
S ++ C+ ++ + +G + M KLG MV Y +++ +L + + A +L +
Sbjct: 252 YSSLIDGFCKGGEV--ERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 309
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP----------DVYTYNV 281
M+ G PD+V Y ++G+ E KA+ +FD ++ G P D+ Y V
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369
Query: 282 YINGLCKQNNVEAGIKMIA-CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
++GLCK + + + ++E +PDV YN +L + CK R++++ ++ K+M K
Sbjct: 370 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEK 429
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
N+ T++I++ GL + +A +L +++G + + +C+ G A
Sbjct: 430 NCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 488
Query: 401 LELLKQMADKDVSPGARVWEALLLSSV 427
LEL ++ P + AL+ V
Sbjct: 489 LELFEEAVKGGCVPDVVTYSALITGLV 515
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 5/250 (2%)
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
+G+ + Y ++ L ++ + A + +M +PD + ++L G+ K
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +L + +G VPD YN I+G K + K +A M + P V+TY ++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK +L+ EM+ KG N+ TY+++++GL + + EA +LEE +G
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIR 439
++ I GLC+ V +A + L +M V+P + ++ D + S R
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSAS--R 235
Query: 440 LVDQILNTPC 449
++D + N C
Sbjct: 236 MLDHMSNRGC 245
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 164/336 (48%), Gaps = 42/336 (12%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L + Y CEP +Y+ V+K L ++ D ++ + ++ P + +++ ++
Sbjct: 250 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC--PPNVVTFNMLISF 307
Query: 127 -ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ ++ + +IPK+ G + + + +L + C+Q+ +
Sbjct: 308 LCRKGLVEPALEVLEQIPKY------------------GCTPNSLSYNPLLHAFCKQKKM 349
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D+ + F+ M G +V Y ++ +L + +V A+ +L+Q+K G P ++ Y
Sbjct: 350 --DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 407
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
V++G+ +A EL +E++ GL PD+ TY+ GLC+++ +E I+ ++++
Sbjct: 408 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 467
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G +P+ + YN ++ LCK RE + +L M G + N TY+I+I+GLA +G I EA
Sbjct: 468 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 527
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
LL+E LC RG+VRK+L
Sbjct: 528 RDLLDE-------------------LCSRGVVRKSL 544
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 167/351 (47%), Gaps = 25/351 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y+ +I+ L + + +VLD + +R R V
Sbjct: 155 EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR---------------------RCVPDV 193
Query: 137 NLFYKIPKFRINRVGF--AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ + + R G+ A+++L+ M + G D T +++++ +C++ + D+ + F+
Sbjct: 194 VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV--DDAIEFL 251
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ + G V Y V++ L E+ DA ++ +M G P++V + M+++ + +
Sbjct: 252 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 311
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
A E+ +++ G P+ +YN ++ CKQ ++ + + M G PD+++Y
Sbjct: 312 GLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 371
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTLL ALC+ E++ EL+ ++K KG L +Y+ +IDGL G EA LL E ++
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 431
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
KGL + GLC+ + A+ ++ D + P ++ A++L
Sbjct: 432 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 482
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 96/187 (51%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++PD Y ++ G+ + A + DE+L VPDV TY + + CK++ + +
Sbjct: 154 VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 213
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K++ M + G PD++TYN ++ +C+ ++ E +K + G N +Y+I++ GL
Sbjct: 214 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 273
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +A L+ E KG F+ I LC++GLV ALE+L+Q+ +P +
Sbjct: 274 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 333
Query: 417 RVWEALL 423
+ LL
Sbjct: 334 LSYNPLL 340
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 14/212 (6%)
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+RSLV++ ++ +AL ++ + +PD ++ + +A + L G
Sbjct: 72 LRSLVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRV---LAACG- 123
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC-KVRELNRLR 331
PDV YN + G C ++A +++A E+ +PD TYNTL++ LC + R N L
Sbjct: 124 -PDVMAYNAMVAGYCGAGQLDAARRLVA---EMPVEPDAYTYNTLIRGLCGRGRTANAL- 178
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
++ EM + V ++ TY+I+++ + +A LL+E +KG ++ + G+
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 238
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
CQ G V A+E LK + P + +L
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 270
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M++DG + T ++++ ++C + E L +++M+ G V Y +
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRG--HRKEALSVLRDMRGAGCDPNAVTYNTL 198
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + + +V A +++ M+ G+KP++V + V+NG+ A ++FDE++ GL
Sbjct: 199 VAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGL 258
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD +YN + G CK + + A M G PDV+T+ +L+ +CK L R
Sbjct: 259 APDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVG 318
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LV+EM+ +G+ +N T++ +IDG KG + +A + E + ++ I G C
Sbjct: 319 LVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYC 378
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + +A EL+++M K V P + +L
Sbjct: 379 MVGRMDEARELVREMEAKGVKPDVVTYSTIL 409
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 173/376 (46%), Gaps = 22/376 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
S+L C+P Y+ ++ + ++D + RE P + F ++
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMM--REGGLKPNLVTFNSVVN 235
Query: 125 TYADAHRFQDSVNLFYKIPKFRIN--------------RVGFAIEILNC---MINDGFCV 167
A R +D+ +F ++ K + +VG + E L+ M G
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + ++ +C+ +L + +G V+EM++ G + +T +I KK + DAL
Sbjct: 296 DVVTFTSLIHVMCKAGNL--ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALL 353
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ +M+ I+P +VCY ++NG + +A EL E+ G+ PDV TY+ ++ C
Sbjct: 354 AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + + ++ M E G PD ITY++L++ LC+ + L L K M G+ +
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ +IDG +G++ A L +E + G+ + I GL + ++A LL ++
Sbjct: 474 TYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL 533
Query: 408 ADKDVSPGARVWEALL 423
++ P ++AL+
Sbjct: 534 YHEEPVPANIKYDALM 549
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 45/339 (13%)
Query: 107 EKRE-NFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGF 165
E RE + E F LI + D+ + + R R+ ++ N +IN G+
Sbjct: 322 EMRERGLQMNEITFTALIDGFCKKGFLDDA---LLAVREMRQCRIQPSVVCYNALIN-GY 377
Query: 166 CVDGK---------------------TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
C+ G+ T S ILS+ C+ D S L Q+M + G
Sbjct: 378 CMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLN--QQMLENGVLP 435
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y+++IR L +++++ DA + M S G++PD V YT +++G + + +A L
Sbjct: 436 DAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLH 495
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE++ G++PDV TY+V INGL K + +++ + P I Y+ L++ C+
Sbjct: 496 DEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRC-CRN 554
Query: 325 RELNRLRELVKEMKWKGIV----------------LNLQTYSIMIDGLASKGDIIEACGL 368
EL + L+K KG++ L+ YS++I G +G++++A
Sbjct: 555 AELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSF 614
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
++ L G S+ I GL ++G+V +A ++++Q+
Sbjct: 615 HKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P V+ YN +L AL L R M G+ N+ TY+I++ L +G EA
Sbjct: 118 GYAPSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L + G + ++ + C+ G V +A L+ M + + P
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKP 225
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 163/378 (43%), Gaps = 24/378 (6%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
++Q + +LS + S N P +I L + D S V + I
Sbjct: 423 KEQNTSRVKDLLSEMKKS----NLVPTAYTCGMIINGLCRHGSIEDASRVFE-IMVSLGV 477
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIE 155
+ I+ LIK + RFQ++V + + K + ++ A +
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
L MI G + T ++ C+ ++ + + +EM G V T +I
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADR--YFKEMLGCGIAPNDVVCTALIDG 595
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K+ +A I M + PD+ Y+ +++G++ A EL E L GLVPD
Sbjct: 596 YCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPD 655
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V+TYN I+G CKQ + ++ M + G P++ITYN L+ LCK E+ R REL
Sbjct: 656 VFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFD 715
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
+ KG+ N TY+ +IDG G++ +A L +E KG+ S ++ I G + G
Sbjct: 716 GIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEG 775
Query: 396 LVRKALELLKQMADKDVS 413
KAL L + K +
Sbjct: 776 NTEKALSLFLESVQKGFA 793
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
TC +I++ +C R S ++ + M LG V YT +I+ V++ + +A+ IL
Sbjct: 448 TCGMIINGLC--RHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILK 505
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M G++PD++CY V+ G+ +A++ E++ GL P+VYTY I+G CK
Sbjct: 506 VMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSG 565
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ + M G P+ + L+ CK + + M + + +++TYS
Sbjct: 566 EMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYS 625
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I GL G + A LL E L KGL ++ I G C++G + KA +L + M K
Sbjct: 626 ALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQK 685
Query: 411 DVSPGARVWEALL 423
+SP + AL+
Sbjct: 686 GISPNIITYNALI 698
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 136/255 (53%), Gaps = 2/255 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +C ++ DE + M K G + Y+ +I K+++ +A +L
Sbjct: 273 TYNVVIGGLCRAGEV--DEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLE 330
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M S G+KP V YT +++G + Q D +A + +E+L G+ +++TYN + G+CK
Sbjct: 331 EMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFG 390
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++E ++ M +G KPD TYN +++ K + +R+++L+ EMK +V T
Sbjct: 391 DMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCG 450
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++I+GL G I +A + E ++ G+ + ++ I G Q G ++A+ +LK M K
Sbjct: 451 MIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKK 510
Query: 411 DVSPGARVWEALLLS 425
V P + ++++
Sbjct: 511 GVQPDVLCYNSVIIG 525
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 113/215 (52%), Gaps = 1/215 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L++ K+ A+ +L++ G+ PD+ Y +++G Q KA +L + +
Sbjct: 624 YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P++ TYN INGLCK +E ++ + G + +TY T++ CK L+
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLS 743
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ L EM KG+ + YS +IDG +G+ +A L E++ KG + SS+ + +
Sbjct: 744 KAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL-NALM 802
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ G V +A +LL+ M DK V P + L+
Sbjct: 803 DGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILI 837
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 130/273 (47%), Gaps = 2/273 (0%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
G A + M+ G ++ T + ++ VC+ D+ + L + EM +G Y
Sbjct: 358 GEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADAL--LNEMIMVGIKPDTQTYN 415
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
N+I +K++ +L++MK + P M++NG+ A +F+ ++ L
Sbjct: 416 NMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSL 475
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ P+ Y I G ++ + ++++ M++ G +PDV+ YN+++ LCK R++
Sbjct: 476 GVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEA 535
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
++ + EM +G+ N+ TY +I G G++ A +E L G+ + I G
Sbjct: 536 KDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDG 595
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G +A + + M + V P R + AL+
Sbjct: 596 YCKEGSTTEATSIFRCMLGRSVHPDVRTYSALI 628
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 17/278 (6%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + F K+ GF G++ ++ L+K K+ N M + D+ YT +
Sbjct: 183 DEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHL 242
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+N + + + L E+ G P + TYNV I GLC+ V+ ++ M++ G
Sbjct: 243 INAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGL 302
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
DV TY+ L+ K + + +++EM KG+ Y+ +IDG +GD EA
Sbjct: 303 VADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFR 362
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL----- 422
+ EE L +G+ ++ + G+C+ G + KA LL +M + P + + +
Sbjct: 363 VKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYL 422
Query: 423 ----------LLSSVSKLDFVNTSFIRLVDQILNTPCK 450
LLS + K + V T++ I+N C+
Sbjct: 423 KEQNTSRVKDLLSEMKKSNLVPTAYT--CGMIINGLCR 458
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 13/213 (6%)
Query: 218 KKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL------FDELLVL 270
KK+ +FD A+ K +G ++C NG++ D +KA +L ++ +L
Sbjct: 177 KKKGLFDEAVSFFLGAKRNGFVVGLLC----CNGLL--SDLLKANKLELFWRFYNGMLEA 230
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
++ DVYTY IN + N + G +++ MEE G P ++TYN ++ LC+ E++
Sbjct: 231 NVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEA 290
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL K M KG+V ++ TYSI+IDG + EA +LEE +KGL + I G
Sbjct: 291 FELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDG 350
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++G +A + ++M + V + AL+
Sbjct: 351 FMRQGDSGEAFRVKEEMLARGVKLNLFTYNALV 383
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM++ G +V Y VI L + +V +A + M G+ D+ Y+++++G Q+
Sbjct: 261 EMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQK 320
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+A+ + +E+ GL P Y I+G +Q + ++ M G K ++ TYN
Sbjct: 321 RCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYN 380
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L++ +CK ++ + L+ EM GI + QTY+ MI+G + + LL E
Sbjct: 381 ALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKS 440
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
L + I GLC+ G + A + + M V P A ++ L+ V + F
Sbjct: 441 NLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRF 497
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 5/301 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
R ++ A+E+L+ + G D T + I+S C+Q + + + M + G
Sbjct: 632 LRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIG--KAFQLHEYMCQKGISP 689
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ Y +I L K ++ A + + + G+ + V Y +++G + KA LF
Sbjct: 690 NIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLF 749
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+ + G+ PD + Y+ I+G K+ N E + + + G + N L+ CK
Sbjct: 750 DEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKS 808
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ +L+++M K + + TY+I+ID G + EA + + L + +
Sbjct: 809 GKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTY 868
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ G G + L +M KD+ P W ++ + + + D V T ++LVD +
Sbjct: 869 TALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKT--LKLVDDM 926
Query: 445 L 445
L
Sbjct: 927 L 927
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 120/298 (40%), Gaps = 36/298 (12%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+G A ++ M G + T + +++ +C+ ++ L + G V Y
Sbjct: 672 IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAREL--FDGIPGKGLAHNAVTY 729
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I K + A + ++M G+ PD Y+ +++G + + KA LF E +
Sbjct: 730 ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789
Query: 270 LGLV----------------------------------PDVYTYNVYINGLCKQNNVEAG 295
G PD TY + I+ CK ++
Sbjct: 790 KGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEA 849
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ M++ P+ +TY LL + + L EM K I + T+S+MID
Sbjct: 850 EQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDA 909
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+GD ++ L+++ L KG ++ I LC++ V + L++L+++ ++ ++
Sbjct: 910 HLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLN 967
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 115/244 (47%), Gaps = 11/244 (4%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLI-KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILN 158
S+++D K N E +F++ + K +A ++ F K K V A ++L
Sbjct: 765 SALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGK-----VIEANQLLE 819
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M++ D T ++++ C+ L E F +M+K + YT ++
Sbjct: 820 DMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQ--FFVDMQKRNLMPNALTYTALLSGYNM 877
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ + + ++M + I+PD V ++++++ + + D+VK +L D++L G
Sbjct: 878 AGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNV 937
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM- 337
+V I+ LC++ +V +K++ +EE G + T +TL++ K +++ ++K M
Sbjct: 938 CHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMV 997
Query: 338 --KW 339
KW
Sbjct: 998 RFKW 1001
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 18/259 (6%)
Query: 151 GFA-IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
GFA LN ++ DGFC GK V E L D + V+ V Y
Sbjct: 791 GFASTSSLNALM-DGFCKSGK--------VIEANQLLEDMVDKHVKP--------DHVTY 833
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +I K + +A M+ + P+ + YT +L+G + + LFDE++
Sbjct: 834 TILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIA 893
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD T++V I+ K+ + +K++ M + G + L+ LC+ ++
Sbjct: 894 KDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSE 953
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ +++++++ +G+ L+L T S ++ G + A +L+ + S+ ++ I
Sbjct: 954 VLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013
Query: 390 GLCQRGLVRKALELLKQMA 408
A + LKQMA
Sbjct: 1014 VEQDSTDSENAGDFLKQMA 1032
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 59/145 (40%)
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+ + I+G K+ + + + G ++ N LL L K +L M
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
++ ++ TY+ +I+ G+ E LL E KG ++ I GLC+ G V
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A EL K M K + + L+
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILI 313
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 37/312 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + + M G D T S ++ C + L E +G + EM + Y +
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK--EAIGLLNEMVLKTINPNVYTYNIL 275
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +L K+ KV +A +L M +KPD++ Y+ +++G + + KA+ +F+ + ++G+
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335
Query: 273 VPDVYTYNVYINGLCK---------------QNNVEAGI--------------------K 297
PDV+TY + ING CK Q N+ GI
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+I M + G +VITY++L+ LCK L+R L +MK +GI N T++I++DGL
Sbjct: 396 LIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLC 455
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G + +A + ++ L KG ++ I G C++GL+ +AL +L +M D P A
Sbjct: 456 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAV 515
Query: 418 VWEALLLSSVSK 429
+E ++++ K
Sbjct: 516 TFEIIIIALFKK 527
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 152/297 (51%), Gaps = 12/297 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + ++ GF ++ + +++ VC+ D + + +Q++ +V Y+ +
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRA--AIKLLQKIDGRLTKPNVVMYSTI 205
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +L K + V +A G+ ++M GI D+V Y+ ++ G ++ +A L +E+++ +
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTI 265
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+VYTYN+ ++ LCK+ V+ ++A M + KPDVITY+TL+ V E+ + +
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQH 325
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK----GLCTQSSMFDETI 388
+ M G+ ++ TY+I+I+G + EA L +E K G+ T SS+ D
Sbjct: 326 VFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID--- 382
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
GLC+ G + +L+ +M D+ + +L+ L LD F ++ DQ
Sbjct: 383 -GLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 107/198 (54%), Gaps = 2/198 (1%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
IL ++ G PD + +T ++NG+ ++ KA D+LL G + +Y ING+C
Sbjct: 983 ILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVC 1042
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + A IK++ ++ +KPDV+ YNT++ ALCK + +++ L EM KGI ++
Sbjct: 1043 KIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVV 1102
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG--LVRKALELLK 405
TY+ +I G G + EA GLL + + K + ++ + LC+ G L+ ++L +L
Sbjct: 1103 TYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLS 1162
Query: 406 QMADKDVSPGARVWEALL 423
+M D A +E ++
Sbjct: 1163 KMEDNGCKANAVTFEIII 1180
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 77/134 (57%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ EM G ++ Y+++I L K + A+ + N+MK GI+P+ +T++L+G+
Sbjct: 396 LIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLC 455
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
A+E+F +LL G +VYTYNV I+G CKQ +E + M++ ME+ G PD +
Sbjct: 456 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAV 515
Query: 313 TYNTLLQALCKVRE 326
T+ ++ AL K E
Sbjct: 516 TFEIIIIALFKKDE 529
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 4/234 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ ++ F IL ++ G+ D T + +++ +C + + ++ L F ++ GF
Sbjct: 973 HMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQV--NKALHFHDKLLAQGFQLN 1030
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I + K A+ +L ++ KPD+V Y +++ + + KA LF
Sbjct: 1031 QVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFF 1090
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ V G+ DV TYN I G C ++ I ++ M P+V TYN L+ ALCK
Sbjct: 1091 EMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEG 1150
Query: 326 E--LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ L+ ++ +M+ G N T+ I+I L K + + LL E + +GL
Sbjct: 1151 KDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%)
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ V DA+ N+M P I+ + +L+ + Y A L L + G+ PD+ T
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ IN C + G ++A + + G PD +T NTL++ LC ++ + ++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G LN +Y +I+G+ GD A LL++ + M+ I LC+ LV +
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L +M K +S + L+
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLI 241
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 106/215 (49%), Gaps = 2/215 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + V A + N M G D T +++++ C+ + + DE L +EM +
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV--DEALNLFKEMHQKNMVP 372
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G+V Y+++I L K ++ ++++M G +++ Y+ +++G+ +A LF
Sbjct: 373 GIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALF 432
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ G+ P+ +T+ + ++GLCK ++ ++ + G +V TYN ++ CK
Sbjct: 433 NKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQ 492
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
L ++ +M+ G + + T+ I+I L K
Sbjct: 493 GLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKK 527
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%)
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
Y A L L + G+ PD++T N+ IN C + ++A + + G PD IT+ T
Sbjct: 942 YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LC ++N+ ++ +G LN +Y +I+G+ GD A LL + +
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
M++ I LC+ LV KA L +M K +S + L+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLI 1108
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I +L K + V A G+ +M GI D+V Y ++ G + +A L +
Sbjct: 1066 VVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLN 1125
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNN--VEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++++ + P+V TYN+ ++ LCK+ ++ + M++ ME+ G K + +T+ ++ AL +
Sbjct: 1126 KMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFE 1185
Query: 324 VRELNRLRELVKEMKWKGIV 343
E +++ +L+ EM +G++
Sbjct: 1186 KDENDKVEKLLHEMIARGLL 1205
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 151/286 (52%), Gaps = 4/286 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A L+ M+ G + T ++++ ++C + L +E +G V +M+ G V Y +
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRL--EEAVGVVGDMRGAGCAPNAVTYNTL 193
Query: 213 IRSLVKKEKVFDALGILNQMKSDG-IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+ + + ++ A +++ M+ +G KP++V + ++NG+ A ++FDE++ G
Sbjct: 194 VAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG 253
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L PDV +YN ++G CK + + + + M + G PDV+T+ +L+ A CK L +
Sbjct: 254 LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAV 313
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
LV +M+ +G+ +N T++ +IDG KG + +A +EE G+ ++ I G
Sbjct: 314 ALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGY 373
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
C+ G + A EL+++M K V P + ++S K+ ++++F
Sbjct: 374 CKLGRMDLARELIREMEAKRVKPDVVTYST-IISGYCKVGNLDSAF 418
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 146/280 (52%), Gaps = 3/280 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
++ + + M G D T + ++ + C+ +L ++ + V +M++ G V +T +
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL--EQAVALVAQMRERGLRMNEVTFTAL 334
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I KK + DAL + +M+ GI+P +VCY ++NG A EL E+ +
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY+ I+G CK N+++ ++ M + G PD ITY++L++ LC+ + LN E
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L + M G+ + TY+ +IDG +G++ +A L +E + KG+ + I GL
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ ++A LL ++ +D P ++AL+L SK +F
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALML-CCSKAEF 553
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 153/327 (46%), Gaps = 40/327 (12%)
Query: 115 PEFI-FIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKT 171
P+ + F LI A + +V L ++ + R+N V F I DGFC G
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI------DGFCKKGFL 344
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
D+ L V+EM+K G +V Y +I K ++ A ++ +
Sbjct: 345 ----------------DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M++ +KPD+V Y+ +++G + A +L ++L G++PD TY+ I GLC++
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ ++ M +LG +PD TY TL+ CK + + L EM KG++ ++ TYS+
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508
Query: 352 MIDGLASKGDIIEACGLLEEALNKG------------LCTQSSMFDETIC---GLCQRGL 396
+I+GL+ EA LL + ++ LC + F + G C +GL
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 568
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
+++A ++ + M D++ V+ L+
Sbjct: 569 MKEADKVYQSMLDRNWKLDGSVYSILI 595
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 140/312 (44%), Gaps = 38/312 (12%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GM 206
R+ A+ ++ M G + T + ++++ C +L E + V M++ G +
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV--VSLMREEGNAKPNL 223
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V + +++ L K ++ A + ++M +G+ PD+V Y +L+G ++ +F E
Sbjct: 224 VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK------------------ 308
+ GLVPDV T+ I+ CK N+E + ++A M E G +
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 309 -----------------PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
P V+ YN L+ CK+ ++ REL++EM+ K + ++ TYS
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I G G++ A L ++ L KG+ + + I GLC+ + A EL + M
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 412 VSPGARVWEALL 423
V P + L+
Sbjct: 464 VQPDEFTYTTLI 475
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 114/271 (42%), Gaps = 54/271 (19%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A E++ M D T S I+S C+ +L D Q+M K G
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL--DSAFQLNQKMLKKGVLPD 432
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+++IR L +++++ DA + M G++PD YT +++G + + KA L D
Sbjct: 433 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 492
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G++PDV TY+V INGL K + +++ + PD I Y+ L+ C
Sbjct: 493 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC-CSKA 551
Query: 326 ELNRLRELVKEMKWKGIV----------------LNLQTYSIMIDG-------------- 355
E + L+K KG++ L+ YSI+I G
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611
Query: 356 ---------------------LASKGDIIEA 365
L +G ++EA
Sbjct: 612 KQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 168/345 (48%), Gaps = 26/345 (7%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQD 134
C P Y+ +I L + + + +L+ E + P+ F + LI + + + D
Sbjct: 111 CVPTAVTYNSLISGLCKAERASEAYDLLE--EMVYSGCIPDIFTYTTLITGFCKSKKSDD 168
Query: 135 SVNLFYKI--PKFRINRVGF---------------AIEILNCMINDGFCVDGK-TCSLIL 176
++ +F ++ FR + V + AI++ MI G C+ T + ++
Sbjct: 169 ALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 228
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
S C + DE + ++ M + G +V YT ++ K ++ DA +LNQM G
Sbjct: 229 SGFCRMGKM--DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ PD+V +T +++G+ + A + E+ P VYTYN ++G C+ N +E
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K + +EE+ P+V+++N +++ LCKV + ELV+E + + ++ Y+ +IDGL
Sbjct: 347 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKA 400
+ + EAC + + L + C +S+ + I GLC G++ +A
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA 449
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 4/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A+ L M++ GF D T + ++ ++C + L E F++EM
Sbjct: 23 KVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH--EARKFLEEMANRNLTPN 80
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT +I L K +V +A+ +L++M+ + P V Y +++G+ E +A +L +
Sbjct: 81 VVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLE 139
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G +PD++TY I G CK + +++ + G +PDV+TY+ L+ LCK
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199
Query: 326 ELNRLRELVKEMKWKGIVL-NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L +L M G + N TY+ +I G G + EA LLE G +
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C+ + A +LL QM K ++P + +L+
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 138/278 (49%), Gaps = 6/278 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GM 206
NR+ A + L M N + T ++++ +C+ + DE + + +M+K C
Sbjct: 60 NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRV--DEAVALLSKMRKK--CVPTA 115
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K E+ +A +L +M G PDI YT ++ G + A +F++
Sbjct: 116 VTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQ 175
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITYNTLLQALCKVR 325
L+ G PDV TY+ I+GLCK+ ++ I + M + GS P+ +TYN+L+ C++
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ L++ M G ++ TY+ +++G + +A LL + KGL F
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ + A+ +L +M K SP + +L
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 137/268 (51%), Gaps = 6/268 (2%)
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
D T + ++ +C+ + L ++ L F+ +M GF + YT VI +L + ++ +A
Sbjct: 9 ADFVTYTSLIQGLCKVKRL--EQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
L +M + + P++V YT++++G+ +A L ++ VP TYN I+GL
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGL 125
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK ++ M G PD+ TY TL+ CK ++ + + +++ +G ++
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLK 405
TYS +IDGL +G + EA L + G C +++ ++ I G C+ G + +A+ LL+
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245
Query: 406 QMADKDVSPGARVWEALL--LSSVSKLD 431
+MA+ SP + L+ +++LD
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLD 273
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 149/363 (41%), Gaps = 59/363 (16%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL C P Y +I ++ + D V + + R F + LI
Sbjct: 137 LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR-GFRPDVVTYSCLIDGL 195
Query: 127 ADAHRFQDSVNLFYKIPKF------------------RINRVGFAIEILNCMINDGFCVD 168
R +++++LF ++ K R+ ++ A+ +L M G D
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + +++ C+ L D+ + +M + G +V +T+++ L ++ ++ DA+ I
Sbjct: 256 VVTYTTLMNGFCKLARL--DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE------------LLVLGLV--- 273
L +M+ P + Y +L+G +A + E +++ GL
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN 373
Query: 274 ------------------PDVYTYNVYINGLCKQNNVEAGIKMIACM-EELGSKPDVITY 314
PDV Y I+GLC++ V+ ++ M EE G P+ ITY
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+TL+ LC L+R R ++ KG V N+ TY+++ID +A LL++ +
Sbjct: 434 STLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489
Query: 375 KGL 377
+G
Sbjct: 490 RGF 492
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 164/367 (44%), Gaps = 24/367 (6%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P A Y+ VI + ++ + +R ++ + +I + R ++
Sbjct: 68 PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEA 127
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK--TCSLILSSVCEQ----------- 182
V +F ++ V + N +I G+C GK T L + E+
Sbjct: 128 VKVFDEM--LTKGEVKPEAVMYNALIG-GYCDQGKLDTALLYRDRMVERGVAMTVATYNL 184
Query: 183 ------RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
D E V+EM G + Y +I K+ V AL I M G
Sbjct: 185 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 244
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++ +V YT ++ + + + ++LFDE + G+ PD+ YN IN N++
Sbjct: 245 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 304
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ ME+ PD +TYNTL++ LC + ++ R+L+ EM +GI +L TY+ +I G
Sbjct: 305 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 364
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ KGD+ +A + E +NKG ++ I GLC+ G A ++K+M + ++P
Sbjct: 365 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 424
Query: 417 RVWEALL 423
+ +L+
Sbjct: 425 STYISLI 431
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 6/301 (1%)
Query: 148 NRVGFAIEILNCMI-NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG- 205
RV A++I+ M G + T ++S C+ + DE + EM G
Sbjct: 86 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV--DEAVKVFDEMLTKGEVKPE 143
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I + K+ AL ++M G+ + Y ++++ + + +A EL +
Sbjct: 144 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 203
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL PDV+TYN+ ING CK+ NV+ +++ M G + V+TY +L+ AL K
Sbjct: 204 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKG 263
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L E +GI +L Y+ +I+ ++ G+I A ++ E K + ++
Sbjct: 264 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 323
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ GLC G V +A +L+ +M + + P + L+ K D + +R+ ++++
Sbjct: 324 TLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDA--LRIRNEMM 381
Query: 446 N 446
N
Sbjct: 382 N 382
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%), Gaps = 2/239 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++ M G D T +++++ C++ ++ + L + M + G +V YT++
Sbjct: 198 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK--KALEIFENMSRRGVRATVVTYTSL 255
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +L KK +V + + ++ GI+PD+V Y ++N + +A E+ E+ +
Sbjct: 256 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 315
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TYN + GLC V+ K+I M + G +PD++TYNTL+ ++
Sbjct: 316 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 375
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ EM KG L TY+ +I GL G +A +++E + G+ S + I GL
Sbjct: 376 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
LF ++ L L T+N+ + LC ++++ M +P+ +TYNT++ C
Sbjct: 28 LFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFC 83
Query: 323 KVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG-LCTQ 380
+ ++++EM+ + GI N TY +I G G + EA + +E L KG + +
Sbjct: 84 SRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 143
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ M++ I G C +G + AL +M ++ V+
Sbjct: 144 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 176
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EI+ M D T + ++ +C + DE + EM K G +V Y +
Sbjct: 303 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV--DEARKLIDEMTKRGIQPDLVTYNTL 360
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K V DAL I N+M + G P ++ Y ++ G+ AE + E++ G+
Sbjct: 361 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 420
Query: 273 VPDVYTYNVYINGLCKQN 290
PD TY I GL ++
Sbjct: 421 TPDDSTYISLIEGLTTED 438
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 156/339 (46%), Gaps = 27/339 (7%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV-------- 150
+E + + F+F LI Y ++ +D++ + + +P +V
Sbjct: 58 LETKGTQRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 117
Query: 151 ------GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
GF IL C G+ ++++ C+ D+ + + K G
Sbjct: 118 YFKLVWGFYKXILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRP 171
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y ++ ++ + + + + M + G++PD+ Y++++NG+ + A ELF
Sbjct: 172 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 231
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+LV GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 232 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKK 291
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L + L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 292 GDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAY 351
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLCQ G A ++L++M + P R + ++
Sbjct: 352 TALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMII 390
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 185 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPN 242
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I +M S + PD++ Y ++ G+ + D +A L D
Sbjct: 243 GVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLID 302
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ +++ + M + D + Y L+ LC+
Sbjct: 303 EMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEG 362
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ N +TY+++I+ KGD+ + LL+E G
Sbjct: 363 RSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 413
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ + D + + M ++ Y +
Sbjct: 227 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKRMLSQSLLPDLITYNTL 284
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 285 IYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENI 344
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP+ TY ++ CK ++ + +
Sbjct: 345 XLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSK 404
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 405 LLKEMQRDGHVPSVVTYNVLMNG 427
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 163/348 (46%), Gaps = 22/348 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S P Y+ +I L++ + + S+ L I+ R + F I Y
Sbjct: 207 LLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR-GLKPDAVTFGAFILGY 265
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ + ++ F + M++ G + +++++ + +L
Sbjct: 266 SKTGKMTEAAKYFDE------------------MLDHGLMPNNPLYTVLINGHFKAGNLM 307
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E L + + LG + + I L+K +V +AL + +++K G+ PD+ Y+
Sbjct: 308 --EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 365
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G Q + KA EL DE+ + G+ P+++ YN ++GLCK +++ K+ M E G
Sbjct: 366 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 425
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+PD +TY+T++ CK + L EM KG+ + Y+ ++ G +GD+ +A
Sbjct: 426 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 485
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L E L KG T S F+ I G C+ +++A +L ++M K + P
Sbjct: 486 NLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMP 532
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 8/265 (3%)
Query: 167 VDGKTCSLILSSV--------CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
+DG +CS + + C + +E ++ E++ G V + I K
Sbjct: 208 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 267
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
K+ +A ++M G+ P+ YT+++NG + ++A +F L LG++PDV T
Sbjct: 268 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQT 327
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+ +I+GL K V+ +K+ + ++E G PDV TY++L+ CK E+ + EL EM
Sbjct: 328 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC 387
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KGI N+ Y+ ++DGL GDI A L + KGL S + I G C+ V
Sbjct: 388 LKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 447
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A L +M K V P + V+ AL+
Sbjct: 448 EAFSLFHEMPSKGVQPHSFVYNALV 472
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 133/306 (43%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EIL MI G + +T L++ C + ++ L + EM+K V Y +
Sbjct: 99 AAEILKGMITLGCKPNSRTFCLLIEGYCREHNMG--RALELLDEMEKRNLVPSAVSYGAM 156
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + + A +L +M G+KP++V Y+ ++ G + +A L D + G+
Sbjct: 157 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGV 216
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD++ YN I+ L K +E + ++ G KPD +T+ + K ++ +
Sbjct: 217 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 276
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC-------------------------- 366
EM G++ N Y+++I+G G+++EA
Sbjct: 277 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLL 336
Query: 367 --GLLEEALN-------KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G ++EAL KGL + I G C++G V KA EL +M K ++P
Sbjct: 337 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 396
Query: 418 VWEALL 423
++ AL+
Sbjct: 397 IYNALV 402
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ A M G D CS ++ + D+ DE+L M G
Sbjct: 22 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI--DEVLRIKDVMVSCGIPIN 79
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I L K K+ A IL M + G KP+ + +++ G + + +A EL D
Sbjct: 80 LITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLD 139
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ LVP +Y INGLC ++ K++ M G KP+V+ Y+TL+
Sbjct: 140 EMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEG 199
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ R L+ M G+ ++ Y+ +I L+ G + EA L E +GL + F
Sbjct: 200 RIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFG 259
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G + +A + +M D + P ++ L+
Sbjct: 260 AFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 297
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 119/234 (50%), Gaps = 2/234 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT + L + +++ +A +M+ G+KPD + +++G + + D + + D ++
Sbjct: 13 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 72
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ ++ TYNV I+GLCK +E +++ M LG KP+ T+ L++ C+ +
Sbjct: 73 SCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMG 132
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R EL+ EM+ + +V + +Y MI+GL D+ A LLE+ GL ++ I
Sbjct: 133 RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 192
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
G G + +A LL M+ V+P + A++ LS K++ +T + +
Sbjct: 193 MGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 246
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 144/293 (49%), Gaps = 6/293 (2%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G + T ++I + +C + ++ +L +EM+K G + +I +++
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT--FEEMQKTGLKPDYNACSALIDGFMRE 58
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ + L I + M S GI +++ Y ++++G+ KA E+ ++ LG P+ T+
Sbjct: 59 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF 118
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I G C+++N+ ++++ ME+ P ++Y ++ LC ++L+ +L+++M +
Sbjct: 119 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 178
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ N+ YS +I G AS+G I EA LL+ G+ ++ I L + G + +
Sbjct: 179 SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 238
Query: 400 ALELLKQMADKDVSPGARVWEALLL--SSVSKLDFVNTSFIRLVDQIL--NTP 448
A L ++ + + P A + A +L S K+ F ++D L N P
Sbjct: 239 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 20/250 (8%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ +I K E V +A + ++M S G++P Y +++G + D KA LF E
Sbjct: 431 VTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 490
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L G + ++N I+G CK ++ ++ M PD +TY T++ CK +
Sbjct: 491 MLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 549
Query: 327 LNRLRELVKEMK-----------------WKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
+ L KEM+ KG+ + TY ++I + +++EA L
Sbjct: 550 MEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 609
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS--SV 427
+E + KG+ T+ ++ D I LC+R + +A +LL +M + + P L+ S
Sbjct: 610 DEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEA 669
Query: 428 SKLDFVNTSF 437
K+D F
Sbjct: 670 GKMDEATRVF 679
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 134/312 (42%), Gaps = 39/312 (12%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y +I ++ + S+ H + + F++ L+ + ++
Sbjct: 427 EPDSVTYSTMIDGYCKSENVAEAFSLF-HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 485
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
NLF ++ + GFA + + DG+C K+C + E QE
Sbjct: 486 NLFREML-----QKGFATTLSFNTLIDGYC---KSCKI-------------QEASQLFQE 524
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDA-----------------LGILNQMKSDGIKP 239
M V YT VI K K+ +A + +M + G+KP
Sbjct: 525 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKP 584
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D V Y +V+ +++ V+A +L DE++ G++ +++ I LCK+ ++ K++
Sbjct: 585 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 644
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M ELG KP + +TL+++ + +++ + + +K G+V + T +++G +
Sbjct: 645 DEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLND 704
Query: 360 GDIIEACGLLEE 371
D +A L+++
Sbjct: 705 TDSEDARNLIKQ 716
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 98/223 (43%), Gaps = 11/223 (4%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKT--CSL 174
F LI Y + + Q++ LF ++ +I + V + I D C GK +L
Sbjct: 502 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI------DWHCKAGKMEEANL 555
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+ + ++R+L D + ++M G V Y VI + K++ + +A + +++
Sbjct: 556 LFKEM-QERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 614
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+ + +++ + +ED +A +L DE+ LGL P + + + + ++
Sbjct: 615 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 674
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
++ ++ LG PD T L+ + R L+K++
Sbjct: 675 ATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + ++ G G L+++++C++ DL+ E + EM +LG + + +
Sbjct: 605 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT--EASKLLDEMGELGLKPSLAACSTL 662
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+RS + K+ +A + +KS G+ PD ++NG + D A L +L+
Sbjct: 663 VRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 182/403 (45%), Gaps = 56/403 (13%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+ Y +I L+ F + +L + K + + E IFI++I+ Y A + ++ F
Sbjct: 96 DTYDSIIHKLSRARVFGPVELLLSDLHKSQ-IKCGENIFINVIRNYGLAGKPDFALRTFI 154
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+I F + R ++ LN ++N F V K L+ + F K
Sbjct: 155 RIQDFNVQR---SVRSLNTLLN-AF-VQNKRYDLVHAM--------------FKNCRSKY 195
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G + +I++L KK V A+ +L++M + G+ P++V YT +L G + D V A
Sbjct: 196 GVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNA 255
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
++F EL G +PD TY + +NG C+Q + IK++ M E G +P+ +TY +++A
Sbjct: 256 NKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEA 315
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG---- 376
CK ++ R L+ +M + V + +ID L G I EAC L + L K
Sbjct: 316 YCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPD 375
Query: 377 ----------LCTQSSM--------------------FDETICGLCQRGLVRKALELLKQ 406
LC + + ++ I G+C++G + +A +L
Sbjct: 376 NAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDD 435
Query: 407 MADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
M +K P A + +L+ SK+ IR+++++L+ C
Sbjct: 436 MMEKGYKPNAFTYN-MLIKGFSKIGNAKEG-IRILEEMLDNRC 476
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 164/336 (48%), Gaps = 42/336 (12%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L + Y CEP +Y+ V+K L ++ D ++ + ++ P + +++ ++
Sbjct: 49 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC--PPNVVTFNMLISF 106
Query: 127 -ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ ++ + +IPK+ G + + + +L + C+Q+ +
Sbjct: 107 LCRKGLVEPALEVLEQIPKY------------------GCTPNSLSYNPLLHAFCKQKKM 148
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D+ + F+ M G +V Y ++ +L + +V A+ +L+Q+K G P ++ Y
Sbjct: 149 --DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 206
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
V++G+ +A EL +E++ GL PD+ TY+ GLC+++ +E I+ ++++
Sbjct: 207 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 266
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G +P+ + YN ++ LCK RE + +L M G + N TY+I+I+GLA +G I EA
Sbjct: 267 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 326
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
LL+E LC RG+VRK+L
Sbjct: 327 RDLLDE-------------------LCSRGVVRKSL 343
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 145/279 (51%), Gaps = 4/279 (1%)
Query: 149 RVGF--AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
R G+ A+++L+ M + G D T +++++ +C++ + D+ + F++ + G
Sbjct: 5 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV--DDAIEFLKNLPSYGCEPNT 62
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y V++ L E+ DA ++ +M G P++V + M+++ + + A E+ ++
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G P+ +YN ++ CKQ ++ + + M G PD+++YNTLL ALC+ E
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ EL+ ++K KG L +Y+ +IDGL G EA LL E ++KGL +
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GLC+ + A+ ++ D + P ++ A++L
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 281
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 4/277 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGM 206
RV AIE L + + G + + +++L +C +R ++EL+G EM + G +
Sbjct: 41 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMG---EMGQKGCPPNV 97
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V + +I L +K V AL +L Q+ G P+ + Y +L+ Q+ KA D
Sbjct: 98 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 157
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G PD+ +YN + LC+ V+ ++++ +++ G P +I+YNT++ L K +
Sbjct: 158 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 217
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
EL+ EM KG+ ++ TYS + GL + I +A + + G+ + +++
Sbjct: 218 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 277
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+R A++L M P + L+
Sbjct: 278 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 314
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 151/354 (42%), Gaps = 35/354 (9%)
Query: 107 EKRENFETPEFIFIDLI-KTYADAHRFQDSVNLFYKIPKFRI--NRVGFAI--------- 154
E R+ TP+ + +++ R D++ +P + N V + I
Sbjct: 17 EMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAE 76
Query: 155 ------EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
E++ M G + T ++++S +C R + L ++++ K G +
Sbjct: 77 RWEDAEELMGEMGQKGCPPNVVTFNMLISFLC--RKGLVEPALEVLEQIPKYGCTPNSLS 134
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ + K++K+ A+ L+ M S G PDIV Y +L + + A EL +L
Sbjct: 135 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 194
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P + +YN I+GL K + ++++ M G +PD+ITY+T+ LC+ +
Sbjct: 195 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 254
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+++ GI N Y+ +I GL + + A L + G S + I
Sbjct: 255 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 314
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
GL GL+++A +LL ++ + V + +N IRL+D
Sbjct: 315 EGLAYEGLIKEARDLLDELCSR---------------GVVRKSLINKGAIRLLD 353
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%)
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK++ + +K++ M + G PD++TYN ++ +C+ ++ E +K + G N
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+Y+I++ GL + +A L+ E KG F+ I LC++GLV ALE+L+Q
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 407 MADKDVSPGARVWEALL 423
+ +P + + LL
Sbjct: 123 IPKYGCTPNSLSYNPLL 139
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 147/286 (51%), Gaps = 7/286 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C++ ++ +L+ + K G +V +
Sbjct: 122 GFYKEILEC----GYPASLYFFNILMHRFCKEGEIRLAQLV--FDAITKWGLKPSVVSFN 175
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ +K + + + N M + G +PD+ Y++++NG+ + +A ELFDE+L
Sbjct: 176 TLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEK 235
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK ++ +++ + G PD+ITYNTL+ CK +L +
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQT 295
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
R+L+ EM KG+ + TY+ +IDG +GD+ A ++ + + + ++ I G
Sbjct: 296 RDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISG 355
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
LC+ G A ++L++M + P + + ++++ K VNT
Sbjct: 356 LCKEGRSVDAEKMLREMLSVGLKPDSGTY-TIVMNEFCKNGDVNTG 400
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + DE EM + G V +T
Sbjct: 190 GFRLK--NAMHASGAQPDVYTYSVLINGLCKESKM--DEAHELFDEMLEKGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K K+ A+ I Q+ S G+ PD++ Y ++ G + D + +L DE+ +
Sbjct: 246 TLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M E + D + Y L+ LCK
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+I+++ GD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDG 411
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ L D + +++ G ++ Y +
Sbjct: 225 AHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKL--DLAMEIYKQILSQGLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I KK + ++++M G+KPD + YT +++G + D A E +++ +
Sbjct: 283 IYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLCK+ KM+ M +G KPD TY ++ CK ++N +
Sbjct: 343 RLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G V ++ T
Sbjct: 403 LLKEMQRDGHVPSVVT 418
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 170/363 (46%), Gaps = 44/363 (12%)
Query: 98 DISSVLDHIEKRENFETPEFIF--IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
+ S + I + ++ET ++ I+ + D H +N F ++RV F +
Sbjct: 64 EFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFC-----HLHRVDFGLS 118
Query: 156 ILNCMIN--------------DGFCVDGK---------------------TCSLILSSVC 180
+L+ ++ +G C++GK T ++I++S+
Sbjct: 119 VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSL- 177
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ ++E LGF+++M+K+G +V+Y+ +I + ++ +A + + M S G P+
Sbjct: 178 -SKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPN 236
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+ YT ++NG E +A +L DE L GLVPD+ T+ I+GLC+ A ++
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ G P+++TY LL LCK L L +EM+ + NL Y+I+ID L G
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
I + L +++GL + + LC+ GL+ +A +L ++M + +P +
Sbjct: 357 KIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYN 416
Query: 421 ALL 423
++
Sbjct: 417 VII 419
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 108/210 (51%), Gaps = 4/210 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCF 204
+I R+ A+++L+ + G D T + I+S +C R L++ +L ++ G
Sbjct: 249 KIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH---GHTP 305
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ Y ++ L K + +A + +M+ +KP++V YT++++ + +ELF
Sbjct: 306 NIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELF 365
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L+ GL P+VYTY + LCK+ + K+ MEE G PD YN ++Q +
Sbjct: 366 SRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQH 425
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ + R+LV+EM +G + T +++ D
Sbjct: 426 KDPSMARQLVEEMVNRGFSADAATRALLND 455
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 113/222 (50%), Gaps = 2/222 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL M P IV ++ + + ++ Y L E+ LG+ D+++ ++ I
Sbjct: 45 DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N C + V+ G+ +++ + +LG +P ++T+ TLL LC +++++ L +M +G+
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQ 164
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ TY+++I+ L+ G EA G L++ G + I G C RG + +A +
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSV 224
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
M K +P + + L++ K++ + + ++L+D+ L
Sbjct: 225 FDLMVSKGCTPNVYTYTS-LMNGYCKIERIEEA-VQLLDETL 264
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 40/296 (13%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + A+++ + M G D KT ++++ +C+ R L K G C G V
Sbjct: 91 NGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG----LAIKLHEKMKGNCKGDV 146
Query: 208 -DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y +I SL K +AL + ++M GI PD+V Y+ +++G+ +A E F E
Sbjct: 147 FTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKE 206
Query: 267 LLVLGLVPDVYTYN-----------------------------------VYINGLCKQNN 291
+ G+ DVYTYN + I+GLCK+
Sbjct: 207 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 266
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
V +++ M G +PD++TYNTL+ LC V +L +L + + +GI LN+ +Y+I
Sbjct: 267 VGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 326
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+I+G I EA L EE KGL + ++ I LCQ G VR A +L +M
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 382
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 37/304 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ A+E M G D T + ++ + R E+ F+ M GF
Sbjct: 193 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL--SRAGLWKEVTWFLNLMVDRGFSPD 250
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+T +I L K+ KV +A IL M G +PDI+ Y ++NG+ + A +LF+
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L G+ +V++YN+ ING CK ++ ++ M G KP +TYNTL+ ALC+
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA-------------------- 365
+ ++L EM+ G L L TY +++DGL G + EA
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFS 430
Query: 366 --------CGLLEEALNK-------GLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
G LEEA + GL + ++ I GLC +G++ +A++LL QM +K
Sbjct: 431 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 490
Query: 411 DVSP 414
P
Sbjct: 491 GCLP 494
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 149/314 (47%), Gaps = 38/314 (12%)
Query: 147 INRVGFAIEI---LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE-------------- 189
++R G E+ LN M++ GF D T ++++ +C++ + +
Sbjct: 226 LSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPD 285
Query: 190 ------------LLGFVQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
L+G +++ KL G + Y +I K +K+ +A +
Sbjct: 286 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFE 345
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+M+ G+KP V Y ++ G + Q V+ A++LF E+ G + TY V ++GLCK
Sbjct: 346 EMRPKGLKPSTVTYNTLI-GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN 404
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
++E I + +++ KP++ ++ LL +C+ +L + E+ G+ + Y
Sbjct: 405 GHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAY 464
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+I+I+GL +KG + EA LL + KG S F+ I L + + +A++LL++M +
Sbjct: 465 NILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRN 524
Query: 410 KDVSPGARVWEALL 423
++ SP V LL
Sbjct: 525 RNFSPDEAVTSMLL 538
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G +PD V T ++ GV ++ A +LFDE+ GL D TY + INGLCK
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
IK+ M+ K DV TY ++ +LCK ++ EM GI+ ++ YS ++DG
Sbjct: 132 IKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L G + EA +E +G+ ++ I GL + GL ++ L M D+ SP
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250
Query: 416 ARVWEALL 423
A + L+
Sbjct: 251 AFTFTILI 258
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 3/247 (1%)
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
K GF V T +++ + + + DA+ + ++M G+ D Y +++NG+
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
A +L +++ DV+TY + I+ LCK + M + M G PDV+ Y++L+
Sbjct: 130 LAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LC+ L E KEM+ +GI ++ TY+ +I GL+ G E L +++G
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTS 436
+ F I GLC+ G V +A ++L+ M K P + L+ L V +L+
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308
Query: 437 FIRLVDQ 443
F L D+
Sbjct: 309 FESLADR 315
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 179/383 (46%), Gaps = 28/383 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEK--------RENFETPEF- 117
+L ++ CE +Y+ V+K L ++ D+ ++D + K ++ TP+
Sbjct: 208 MLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIR 267
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCM 160
++ +I + + + ++P + + +R A E+L M
Sbjct: 268 MYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEM 327
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
+D T ++++ C+ + D ++ +++M + G ++ YT VI K+
Sbjct: 328 YQKNCPLDDVTFNILVDFFCQNGLV--DRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 385
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
+ +A+ +L M S G KP+ + YT+VL G+ E +V AEEL ++ G +P+ T+N
Sbjct: 386 LIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFN 445
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
IN LCK+ VE I+++ M G PD+I+Y+T++ L K + EL+ M K
Sbjct: 446 TIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINK 505
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
GI N+ TYS M LA +G I + + + + + + + +++ I LC+R A
Sbjct: 506 GITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLA 565
Query: 401 LELLKQMADKDVSPGARVWEALL 423
++ L M P + AL+
Sbjct: 566 IDFLAYMVSNGCMPNESTYTALI 588
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 169/383 (44%), Gaps = 68/383 (17%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY + V++ L + D +VLD + R P + +I++ + +
Sbjct: 113 PPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHV-IIESACRSGGYSS-- 169
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
A+ +L + G +D C+L+++++C+Q + DE L +++
Sbjct: 170 ----------------ALRVLEALHAKGSTLDTGNCNLVINAICDQGCV--DEGLEMLRK 211
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKE-------------KVFDALG---------------- 227
+ G +V Y V++ L + KV +AL
Sbjct: 212 LPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYAT 271
Query: 228 ----------------ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
IL++M S G+KP++VCY VL G+ + + KAEEL E+
Sbjct: 272 IIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKN 331
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
D T+N+ ++ C+ V+ I+++ M E G PDVITY T++ CK ++
Sbjct: 332 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 391
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L+K M G N +Y+I++ GL S ++A L+ + +G F+ I L
Sbjct: 392 MLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFL 451
Query: 392 CQRGLVRKALELLKQMADKDVSP 414
C++GLV +A+ELLKQM +P
Sbjct: 452 CKKGLVEQAIELLKQMLVNGCNP 474
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 23/230 (10%)
Query: 173 SLILSSVCE-QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
+++L +C +R + ++EL+ M + G V + +I L KK V A+ +L Q
Sbjct: 410 TIVLKGLCSTERWVDAEELM---SRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQ 466
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M +G PD++ Y+ V++G+ +A EL + ++ G+ P+V TY+ L ++
Sbjct: 467 MLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGR 526
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
++ I+M +++ + D + YN ++ +LCK RE + + + M G + N TY+
Sbjct: 527 IDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTA 586
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+I GLAS+G + EA LL E LC R VRK L
Sbjct: 587 LIKGLASEGLLCEAQDLLSE-------------------LCSRRAVRKHL 617
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 104/263 (39%), Gaps = 48/263 (18%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
V+ + G G+VDY ++ + +V A + + + P+ Y V+ G+
Sbjct: 72 VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPVVRGLCG 128
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYIN----------------------------- 284
+ A + DE+ VP Y+V I
Sbjct: 129 RGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGN 188
Query: 285 ------GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR----------ELN 328
+C Q V+ G++M+ + G + D+++YN +L+ LC + E+
Sbjct: 189 CNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMV 248
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ E + +M G +++ Y+ +IDG+ +G A +L + GL ++ +
Sbjct: 249 KVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVL 308
Query: 389 CGLCQRGLVRKALELLKQMADKD 411
G+C KA ELL +M K+
Sbjct: 309 KGICSADRWEKAEELLTEMYQKN 331
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 199/462 (43%), Gaps = 78/462 (16%)
Query: 21 PLSPYKA-KWHQTLDQQQAKQNVKQSLTTPP------TKQQQQIPKQPH----ILSSLLH 69
P SP A + H + + + V+ S +PP T+ P++ H LS+L+H
Sbjct: 17 PFSPSSAGRPHHSRHPARRRLCVRSSRPSPPGIPNTSTRPPPLPPRRLHGADRRLSALIH 76
Query: 70 ------SFSIYNCEP-PPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
+ + P PP+ + +++ L + D + V++ T +
Sbjct: 77 RGDLDAALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVEACGPEATAAT----YG 132
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMIND 163
L+ Y A +D+ + +P RV A+ +L+ M+
Sbjct: 133 ALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCR 192
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G D T +++L + C+ R + L + M+ G V Y +I ++ ++ V
Sbjct: 193 GCAPDVVTYNILLQAACKGRGYR--QALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVD 250
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV-------------- 269
A +LN + S G KP+ V Y VL G E +V A+E+ DE++
Sbjct: 251 QARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVII 310
Query: 270 ---------------------LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G +V TYN I+G+C+Q NV++ +++++ M+ G K
Sbjct: 311 NTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCK 370
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD++TYNT+L+ LC EL+ +M + + T++ +I KG I++A +
Sbjct: 371 PDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEV 430
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ KG S+ + I GL + G + +ALELL +MA+K
Sbjct: 431 FKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANK 472
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 113/216 (52%), Gaps = 2/216 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +I +L ++ +V DAL +L+ M G PD+V Y ++L Y +A EL D +
Sbjct: 166 HNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMR 225
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P+ TYNV I+ +C++ +V+ +++ + G KP+ + YNT+L+ C +
Sbjct: 226 AEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWV 285
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDET 387
E++ EM + N T +++I+ L KG +++ L E ++K CT + + ++
Sbjct: 286 DADEILDEMVRENCPPNEATLNVIINTLCRKG-LLQKVTLYLEKMSKHGCTANVVTYNAV 344
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G+C++G V ALELL M P + +L
Sbjct: 345 ISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVL 380
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++R L ++ + DA ++ ++ G + Y +++G Y +A L D V+G
Sbjct: 102 LVRDLCRRGRPADAARVV---EACGPEATAATYGALVDG------YCRAGLLEDARRVVG 152
Query: 272 LVP------DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+P Y +N I+ LC++ V + ++ M G PDV+TYN LLQA CK R
Sbjct: 153 GMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGR 212
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ EL+ M+ +G N TY+++ID + +GD+ +A LL ++G + ++
Sbjct: 213 GYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYN 272
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
+ G C A E+L +M ++ P
Sbjct: 273 TVLKGFCSIERWVDADEILDEMVRENCPP 301
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 3/150 (2%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PDV N + LC++ +++ E G + TY L+ C+ L R +
Sbjct: 94 PDVPLANRLVRDLCRRGRPADAARVV---EACGPEATAATYGALVDGYCRAGLLEDARRV 150
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V M + ++ +I L +G + +A +L+ L +G ++ + C+
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
R+ALEL+ M + P + ++
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVII 240
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 179/372 (48%), Gaps = 29/372 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P A+ F+I L ++ + D + D + P+ + + TY +
Sbjct: 168 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAM--------PQNGVVPSVMTY-------N 212
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
++ + Y ++ R+ A++I M +G D T + ++ +C+Q+ ++ELL
Sbjct: 213 AMIVGYS----KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELL--- 265
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
K GF +V +TN+I EK DAL + N+M S K D+ + ++N +I +
Sbjct: 266 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 325
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A+EL +E+ GLVP+V TY I+G CK V+ ++++ ME G +P+ TY
Sbjct: 326 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 385
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N+L+ L K ++L++ L+ +M+ GI+ N+ TY+ ++ G + D A L E
Sbjct: 386 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 445
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK---LD 431
GL + LC+ G +A + + K V+ +V+ L+ SK D
Sbjct: 446 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVAL-TKVYYTTLIDGFSKAGNTD 501
Query: 432 FVNTSFIRLVDQ 443
F T R++D+
Sbjct: 502 FAATLIERMIDE 513
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 169/381 (44%), Gaps = 37/381 (9%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
C+P Y+ ++ L ++ + ++L ++K + P I + L++ D H F
Sbjct: 377 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK--DGIIPNVITYTTLLQGQCDEHDFD 434
Query: 134 DSVNLF--------------YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
++ LF Y + + + G A E + ++ G + + ++
Sbjct: 435 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGF 494
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
+ + +D ++ M G Y+ ++ +L K++++ +AL IL+QM GIK
Sbjct: 495 SKAGN--TDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 552
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
I YT++++ ++ + + A+ +++E+ G P TY V+IN CK+ +E +I
Sbjct: 553 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 612
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
ME G PDV+TYN L+ + ++R +K M N TY +++ L K
Sbjct: 613 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLL-K 671
Query: 360 GDI-----IEACG------------LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
G++ ++ G LLE + GL + + I G C+ G + +A
Sbjct: 672 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 731
Query: 403 LLKQMADKDVSPGARVWEALL 423
LL M K +SP ++ L+
Sbjct: 732 LLDHMCGKGLSPNEDIYTLLI 752
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 18/297 (6%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
FA ++ MI++G D T S++L ++C+Q+ L +E L + +M G + YT
Sbjct: 502 FAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL--NEALPILDQMSLRGIKCTIFAYTI 559
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I ++++ K A + N+M S G KP YT+ +N + AE+L ++ G
Sbjct: 560 LIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREG 619
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK-----VR- 325
+ PDV TYN+ I+G ++ + M +P+ TY LL+ L K VR
Sbjct: 620 VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRS 679
Query: 326 ----------ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
EL+ +L++ M G+ + TYS +I G G + EAC LL+ K
Sbjct: 680 VDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGK 739
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
GL ++ I C KAL + M++ P + L++ ++ DF
Sbjct: 740 GLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDF 796
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 143/349 (40%), Gaps = 67/349 (19%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE---------------- 189
R + + + + ++ DG D T + ++ S C++ DL++
Sbjct: 45 RFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETF 104
Query: 190 -----LLGFVQ--EMKKLGFCFGMV----------DYTNVIRSLVKKEKVFDALGILNQM 232
+LG+ + E++K + F M+ YT +I+ L + V AL + M
Sbjct: 105 TCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMM 164
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K DG P++ +T +++G+ A LFD + G+VP V TYN I G K +
Sbjct: 165 KRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRM 224
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALC--KVRELNR-LRELVKE------------- 336
+K+ ME+ G PD TYNTL+ LC K E L VKE
Sbjct: 225 NDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLI 284
Query: 337 --------------MKWKGIV----LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
MK K + L+LQ + +I+ L K + EA LL E GL
Sbjct: 285 NGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLV 344
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ I G C+ G V ALE+LK M P A + +L+ V
Sbjct: 345 PNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 393
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 159/370 (42%), Gaps = 28/370 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y+ +I L + Q + + L + +E F F +LI Y A +F D
Sbjct: 238 GCHPDDWTYNTLIYGLCD--QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDD 295
Query: 135 SVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
++ + K+ + +R+ A E+LN + +G + T + I+
Sbjct: 296 ALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIID 355
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
C+ + D L ++ M++ G Y +++ LVK +K+ A+ +L +M+ DGI
Sbjct: 356 GYCKSGKV--DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 413
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P+++ YT +L G + D+ A LF+ + GL PD + Y V + LCK E
Sbjct: 414 IPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS 473
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
I G + Y TL+ K + L++ M +G + TYS+++ L
Sbjct: 474 FIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 530
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETIC--GLCQRGLVRKALELLKQMADKDVSPG 415
+ + EA +L++ +G+ + ++F TI + + G A + +M P
Sbjct: 531 KQKRLNEALPILDQMSLRGI--KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 588
Query: 416 ARVWEALLLS 425
A + + S
Sbjct: 589 ATTYTVFINS 598
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +RSL + + + +Q+ DG+ PD V Y ++ + D A F LL
Sbjct: 36 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P+ +T N + G C+ + + M +G + + +Y L+Q LC + +
Sbjct: 96 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVR 155
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ L MK G N++ ++ +I GL G + +A L + G+ ++ I
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + G + AL++ + M P + L+
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 250
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 1/214 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA+ + + S + CY L + + ++ +L+ GL+PD TYN I
Sbjct: 16 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 75
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
CK+ ++ + + E G +P+ T N L+ C+ EL + L M G
Sbjct: 76 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 135
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N +Y+I+I GL + +A L G F I GLC+ G V A L
Sbjct: 136 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 195
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
M V P + A+++ SKL +N +
Sbjct: 196 FDAMPQNGVVPSVMTYNAMIV-GYSKLGRMNDAL 228
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 133/356 (37%), Gaps = 45/356 (12%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y ++ L + + + +LD + R + F + LI
Sbjct: 514 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR-GIKCTIFAYTILID---------- 562
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
R + A + N M + G T ++ ++S C++ L E L +
Sbjct: 563 --------EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDL--I 612
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+M++ G +V Y +I + A L +M +P+ Y ++L ++
Sbjct: 613 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 672
Query: 255 E-DYVKA---------------EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
YV++ +L + ++ GL P V TY+ I G CK +E +
Sbjct: 673 NLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLL 732
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M G P+ Y L++ C + + V M G L++Y +++ GL +
Sbjct: 733 LDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCN 792
Query: 359 KGDIIEA----CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+GD + C LLE N + D GL + G V ++L M +
Sbjct: 793 EGDFEKVKSLFCDLLELGYNHDEVAWKILND----GLLKAGYVDICFQMLSIMEKR 844
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +M G+ P + Y+ ++ G +A L D + GL P+ Y + I C
Sbjct: 697 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 756
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
E + ++ M E G +P + +Y L+ LC + +++ L ++ G +
Sbjct: 757 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 816
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ I+ DGL G ++ C + + K C SS
Sbjct: 817 AWKILNDGLLKAG-YVDICFQMLSIMEKRYCCISS 850
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 75/162 (46%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
++ M K G + Y+++I K ++ +A +L+ M G+ P+ YT+++
Sbjct: 697 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 756
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ + KA + G P + +Y + + GLC + + E + + ELG D +
Sbjct: 757 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 816
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ L L K ++ +++ M+ + ++ QTY+++ +
Sbjct: 817 AWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 858
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 122/239 (51%)
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L S EQ LS L ++ + +V Y +I S+ K + DA + ++M S
Sbjct: 211 LQSDSEQGSLSQRAPLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSK 270
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
I PD+ Y ++NG + A LF+++ + PDVYT+N+ ++ CK+ V+
Sbjct: 271 RIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEA 330
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+A M + G KPDV+TYN+L+ C V E+N+ + + M +G+ N+++YSIMI+
Sbjct: 331 KNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINR 390
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ +A L +E +K + + I GLC+ G + ALEL +M D+ P
Sbjct: 391 FCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQP 449
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 136/293 (46%), Gaps = 33/293 (11%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ + N +IN GFC+ GK + +G +M +
Sbjct: 271 RIFPDVNTYNALIN-GFCIVGKL----------------KDAIGLFNKMTSENINPDVYT 313
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++ + K+ +V +A L M GIKPD+V Y +++ + + KA+ +F+ +
Sbjct: 314 FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMS 373
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ +V +Y++ IN CK V+ +K+ M P+VITY++L+ LCK ++
Sbjct: 374 HRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRIS 433
Query: 329 RLRELVKEM----------------KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
EL EM K +GI N+ TY+I+IDGL G + +A + E+
Sbjct: 434 YALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDL 493
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L KG + + I G C +GL +A+ LL +M D P A +E ++ S
Sbjct: 494 LVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRS 546
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+N V A I N M + G + ++ S++++ C+ + + D+ + +EM +
Sbjct: 359 VNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMV--DQAMKLFKEMHHKQIFPNV 416
Query: 207 VDYTNVIRSLVKKEKVF----------------DALGILNQMKSDGIKPDIVCYTMVLNG 250
+ Y+++I L K ++ D + + Q+K GI+P++ YT++++G
Sbjct: 417 ITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDG 476
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ A +F++LLV G V TY V I+G C + + + +++ M++ P+
Sbjct: 477 LCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPN 536
Query: 311 VITYNTLLQAL 321
+TY ++++L
Sbjct: 537 AVTYEIIIRSL 547
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 188/439 (42%), Gaps = 60/439 (13%)
Query: 22 LSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPE 81
+ P + +W + +Q LT ++ P L L + + + P PE
Sbjct: 21 VGPLRPRWRASRHGPLRAAGQEQLLTA-----LREQPDPDAALRMLNAALARDDFAPGPE 75
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I+ L D+ VL +RE + + + +Y F D+V+L
Sbjct: 76 VYEEIIRKLGAVGAL-DLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILN 134
Query: 142 I--PKFRINR-------------VGFAIEILNCMIND----GFCVDGKTCSLILSSVCE- 181
P F I G +++L + ++ G D T + ++ ++C
Sbjct: 135 QLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194
Query: 182 --------------QRDLSSDE------LLGFVQE------------MKKLGFCFGMVDY 209
R ++ DE + GFV+E M ++G V
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV-KAEELFDELL 268
+I K +V DALG + Q +DG +PD + Y +NG + Q D+V A ++ D ++
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG-LCQNDHVGHALKVMDVMV 313
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PDV+TYN+ +N LCK +E ++ M + G PD+ T+NTL+ ALC L
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L +++ KG+ ++ T++I+I+ L GD A L EE N G ++ I
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433
Query: 389 CGLCQRGLVRKALELLKQM 407
LC G + KAL+LLK M
Sbjct: 434 DNLCSLGKLGKALDLLKDM 452
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A+ + I DGF D T + ++ +C+ + L + M + G
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG--HALKVMDVMVQEGHDPD 320
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y V+ L K ++ +A GILNQM G PDI + ++ + +A +L
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ V G+ PDVYT+N+ IN LCK + +++ M+ G PD +TYNTL+ LC +
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + +L+K+M+ G + TY+ +IDGL K I EA + ++ +G+ + F+
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 500
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ + A L+ QM + + P + ++L
Sbjct: 501 TLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSIL 538
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 136/260 (52%), Gaps = 2/260 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ VG A+++++ M+ +G D T +++++ +C+ L +E G + +M G +
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL--EEAKGILNQMVDRGCLPDIT 357
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I +L ++ +AL + Q+ G+ PD+ + +++N + D A LF+E+
Sbjct: 358 TFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G PD TYN I+ LC + + ++ ME G ITYNT++ LCK +
Sbjct: 418 KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRI 477
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
E+ +M +GI N T++ +IDGL I +A GL+ + +++GL + ++
Sbjct: 478 EEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSI 537
Query: 388 ICGLCQRGLVRKALELLKQM 407
+ C++G ++KA ++L+ M
Sbjct: 538 LTHYCKQGDIKKAADILETM 557
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 160/345 (46%), Gaps = 23/345 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDS 135
+P Y+ V+ L +N Q + +L+ + R P+ F LI +R +++
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL--PDITTFNTLIAALCTGNRLEEA 375
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
++L ++ G D T +++++++C+ D L +
Sbjct: 376 LDLARQVTV------------------KGVSPDVYTFNILINALCKVGD--PHLALRLFE 415
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EMK G V Y +I +L K+ AL +L M+S G + Y +++G+ +
Sbjct: 416 EMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKM 475
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+AEE+FD++ + G+ + T+N I+GLCK ++ +I M G +P+ ITYN
Sbjct: 476 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYN 535
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++L CK ++ + ++++ M G +++ TY +I+GL G A +L K
Sbjct: 536 SILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIK 595
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
G+ ++ + L +R +R AL L ++MA+ P A ++
Sbjct: 596 GMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYK 640
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 9/274 (3%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ ++G A+++L M + G T + I+ +C++ + E + +M G
Sbjct: 439 LGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEV--FDQMDLQGISRNA 496
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ + +I L K +K+ DA G++NQM S+G++P+ + Y +L Q D KA ++ +
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G DV TY INGLCK + +K++ M G +P YN +LQ+L +
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 616
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLA-SKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L +EM G + TY I+ GL G I EA + E ++KG + S F
Sbjct: 617 IRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFR 676
Query: 386 ETICGLCQRGL---VRKALELLKQMAD---KDVS 413
GL G+ +A+E++ + D DVS
Sbjct: 677 MLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDVS 710
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 172/373 (46%), Gaps = 27/373 (7%)
Query: 56 QIPKQPHILSSLLHSFSI---YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIE-KREN 111
+ PH L S +I Y P + + + + + S C ++ D + R+
Sbjct: 83 HLQNHPHSLDLATSSLAICVLYRLPSPKPSINLIQRLIL--SPTCTNRTIFDELALARDR 140
Query: 112 FETPEFIFIDL-IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK 170
+ + DL ++ Y + + +++ FY I + GF + +
Sbjct: 141 VDAKTTLIFDLLVRAYCELKKPNEALECFYLIKE------------------KGFVPNIE 182
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
TC+ +LS + +L EM ++ + + +I L K+ K+ A +
Sbjct: 183 TCNQMLSLFLKLNRTQMAWVL--YAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIG 240
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M++ G+KP++V Y +++G ++ + +A +F + GL PD YTYN +I+GLCK+
Sbjct: 241 HMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEG 300
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+E +I M E G P+ +TYN L+ C +L++ EM KGI+ +L TY+
Sbjct: 301 RLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYN 360
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+ I L +G + +A +++E KG+ + + I G C+ G ++A LL +M K
Sbjct: 361 LFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGK 420
Query: 411 DVSPGARVWEALL 423
+ P + +L+
Sbjct: 421 GIQPTLVTYTSLI 433
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 139/265 (52%), Gaps = 4/265 (1%)
Query: 160 MINDGFCVDGKTCSLILSSV-CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
MI+ G T +L + ++ E R +D + ++EM++ G V + +I +
Sbjct: 347 MISKGIMASLVTYNLFIHALFMEGRMGDADNM---IKEMREKGMMPDAVTHNILINGYCR 403
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
A G+L++M GI+P +V YT ++ + + +A+ LF ++ GL+PD+
Sbjct: 404 CGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIV 463
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+N I+G C N++ +++ M+ + PD ITYNTL+Q C+ ++ R+L+ EMK
Sbjct: 464 FNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMK 523
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+GI + +Y+ +I G + +GD+ +A + +E + G ++ I GLC+
Sbjct: 524 RRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGE 583
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
A ELLK+M K ++P + +++
Sbjct: 584 HAEELLKEMVSKGITPDDSTYLSII 608
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G + T + ++ C + DL D+ + EM G +V Y I +L +
Sbjct: 312 MLEGGLVPNAVTYNALIDGYCNKGDL--DKAYAYRDEMISKGIMASLVTYNLFIHALFME 369
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ DA ++ +M+ G+ PD V + +++NG D +A L DE++ G+ P + TY
Sbjct: 370 GRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTY 429
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I L K+N ++ + + +++ G PD+I +N L+ C ++R +L+KEM
Sbjct: 430 TSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDN 489
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
++ + TY+ ++ G +G + EA LL+E +G+ ++ I G +RG ++
Sbjct: 490 MKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKD 549
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A + +M P + AL+
Sbjct: 550 AFRVRDEMMTTGFDPTILTYNALI 573
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 113/229 (49%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
Q MK G Y + I L K+ ++ +A G++ +M G+ P+ V Y +++G +
Sbjct: 275 QTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNK 334
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
D KA DE++ G++ + TYN++I+ L + + MI M E G PD +T+
Sbjct: 335 GDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTH 394
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N L+ C+ + R L+ EM KGI L TY+ +I L + + EA L +
Sbjct: 395 NILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQ 454
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+GL +F+ I G C G + +A +LLK+M + V P + L+
Sbjct: 455 EGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLM 503
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 147/304 (48%), Gaps = 9/304 (2%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
KF+ RV I M + G D T + +S +C++ L +E G + +M + G
Sbjct: 266 KFQRARV-----IFQTMKDKGLEPDCYTYNSFISGLCKEGRL--EEASGLICKMLEGGLV 318
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
V Y +I K + A ++M S GI +V Y + ++ + ++ A+ +
Sbjct: 319 PNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNM 378
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E+ G++PD T+N+ ING C+ + + ++ M G +P ++TY +L+ L K
Sbjct: 379 IKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGK 438
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ L +++ +G++ ++ ++ +IDG + G+I A LL+E N +
Sbjct: 439 RNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEIT 498
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQ 443
++ + G C+ G V +A +LL +M + + P + L+S SK + +F R+ D+
Sbjct: 499 YNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT-LISGYSKRGDMKDAF-RVRDE 556
Query: 444 ILNT 447
++ T
Sbjct: 557 MMTT 560
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 121/240 (50%), Gaps = 2/240 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F R+G A ++ M G D T +++++ C D + G + EM G
Sbjct: 367 FMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGD--AKRAFGLLDEMVGKGIQP 424
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V YT++I L K+ ++ +A + ++++ +G+ PDI+ + +++G + +A +L
Sbjct: 425 TLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLL 484
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + ++PD TYN + G C++ VE +++ M+ G KPD I+YNTL+ K
Sbjct: 485 KEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ + EM G + TY+ +I GL + A LL+E ++KG+ S +
Sbjct: 545 GDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G VP++ T N ++ K N + + A M + + + T+N ++ LCK +L +
Sbjct: 176 GFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKA 235
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+E + M+ G+ N+ TY+ +I G +G A + + +KGL ++ I G
Sbjct: 236 KEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISG 295
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
LC+ G + +A L+ +M + + P A + AL+ +K D
Sbjct: 296 LCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L M N D T + ++ C R+ +E + EMK+ G + Y +
Sbjct: 480 AFQLLKEMDNMKVLPDEITYNTLMQGYC--REGKVEEARQLLDEMKRRGIKPDHISYNTL 537
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ + DA + ++M + G P I+ Y ++ G+ ++ AEEL E++ G+
Sbjct: 538 ISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGI 597
Query: 273 VPDVYTYNVYINGLCKQNNVEA 294
PD TY I + +++E
Sbjct: 598 TPDDSTYLSIIEAMETVDDLEG 619
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 155/348 (44%), Gaps = 23/348 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP ++ VI+ L + D + D ++ ++ + F F L+ A R ++++
Sbjct: 217 EPDVVIHNLVIRQLCASGNLEDALAYFDELD--DSLDLTHFTFNPLVAALCKAERTEEAI 274
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
K+ + R F + DGF G+ DE L ++E
Sbjct: 275 AFVKKMSERRC----FPTLFTYTSLVDGFLKLGRL----------------DEALLQLKE 314
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ GF V YT++I L K +V + ++M++ G +PD V Y +++G + +
Sbjct: 315 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 374
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA ++ ++L G V TYN+ ++GLCK V MEE G V+TY+
Sbjct: 375 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 434
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ C ++ EL + M +G NL +Y+I+I GL G + +A E+ L +
Sbjct: 435 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 494
Query: 377 LCTQSSMFDETICGLCQR-GLVRKALELLKQMADKDVSPGARVWEALL 423
LC F+ + GLCQR V +EL + M + SP + L+
Sbjct: 495 LCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILM 542
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 3/206 (1%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T ++ L K ++ A+ +L++M PD+V +T+V+NG+ ++ +A + + +
Sbjct: 13 TALLNGLCKTGQLDRAMLLLDEMPC---SPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G PD TYNV+I+GLCK V+ +++ M+E P +TY L+ L K L+
Sbjct: 70 AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
++++M KG L+TY+++IDGL+ G + EA + + L G + ++ I
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189
Query: 390 GLCQRGLVRKALELLKQMADKDVSPG 415
GL + G + +AL L QM + + G
Sbjct: 190 GLAKIGKLDEALVYLNQMVENGCARG 215
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 4/261 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+++++C+ ++E + FV++M + CF + YT+++ +K ++ +AL L +
Sbjct: 260 LVAALCKAE--RTEEAIAFVKKMSERR-CFPTLFTYTSLVDGFLKLGRLDEALLQLKEAV 316
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G PD V YT +++G+ + E F E+ G PD TY I+G K +
Sbjct: 317 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIP 376
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
++ M + G+ +TYN +L LCK + M+ +G V + TYS ++
Sbjct: 377 KAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALM 436
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DG S+G++ A L L++G ++ I GLC+ G + KA +++ + +
Sbjct: 437 DGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC 496
Query: 414 PGARVWEALLLSSVSKLDFVN 434
P + + L +LD V
Sbjct: 497 PDVYTFNSFLHGLCQRLDTVG 517
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
VC T +LNG+ +A L DE+ PD+ + V INGLC++ ++ ++
Sbjct: 11 VC-TALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLER 66
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
G +PD +TYN + LCK ++ +L+K+M K + TY+ ++DGL G
Sbjct: 67 AVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGR 126
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ EA +LE+ + KG + I GL + G V +A + M P A V+ A
Sbjct: 127 LDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTA 186
Query: 422 LL--LSSVSKLD 431
L+ L+ + KLD
Sbjct: 187 LISGLAKIGKLD 198
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ RV A M G T S ++ C + ++S+ + + M G
Sbjct: 406 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA--AVELFRRMLDRGCEPN 463
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV-KAEELF 264
+V Y +IR L + K+ A ++ + PD+ + L+G+ + D V ELF
Sbjct: 464 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELF 523
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ ++ G P++++Y++ ++G+C+ +E +++ M G PDV+ +NTL++ LC
Sbjct: 524 ESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIA 583
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
++ E+ +E++ + +S++ D + C +EEA
Sbjct: 584 GRVDEALEVFRELERRSAPDAWSYWSLL--------DALSRCERMEEA 623
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 136/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 114 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 167
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 168 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 227
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL+P+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 228 GLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQA 287
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 288 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 347
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M D+ P + ++
Sbjct: 348 LCQEGRSVDAEKMLREMLSVDLKPDTGTYTMII 380
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 108/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 99 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 158
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 159 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 218
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG++ N T++ +IDG G + A + + L++ L ++ I GL
Sbjct: 219 ELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 278
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A +L+ +M+ K + P + L+
Sbjct: 279 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 310
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 175 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLIPN 232
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I +M S + PD++ Y ++ G+ + D +A +L D
Sbjct: 233 GVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 292
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 293 EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 352
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM + + TY+++I+ KGD+ + LL+E G
Sbjct: 353 RSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 403
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 143/301 (47%), Gaps = 51/301 (16%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GFC+ GK E +G + EM + Y ++ +L K+ KV
Sbjct: 243 GFCIVGKL----------------KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A +L M +KPD++ Y+ +++G + + KA+ +F+ + ++G+ PDV+TY + I
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346
Query: 284 NGLCK---------------QNNVEAGI--------------------KMIACMEELGSK 308
NG CK Q N+ GI +I M + G
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQP 406
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
DVITY++L+ LCK L+R L +MK + I N+ T++I++DGL G + +A +
Sbjct: 407 ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEV 466
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
++ L KG ++ I G C++GL+ +AL +L +M D P A +E ++++
Sbjct: 467 FQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFK 526
Query: 429 K 429
K
Sbjct: 527 K 527
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 151/297 (50%), Gaps = 12/297 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + ++ GF ++ + + +++ VC+ D + + F++++ +V Y +
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGD--TRAAIKFLRKIDGRLTKPDVVMYNTI 205
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I ++ K + V +A G+ ++M GI D+V Y ++ G + +A L +E+++ +
Sbjct: 206 IDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTI 265
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+VYTYN+ ++ LCK+ V+ ++A M + KPDVITY+TL+ V E+ + +
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQH 325
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK----GLCTQSSMFDETI 388
+ M G+ ++ TY+I+I+G + EA L +E K G+ T SS+ D
Sbjct: 326 VFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID--- 382
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
GLC+ G + +L+ +M D+ + +L+ L LD F ++ DQ
Sbjct: 383 -GLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 179/400 (44%), Gaps = 28/400 (7%)
Query: 48 TPPTKQQQQI----PKQPHILS--SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISS 101
TPP Q +I K H + SL H + +P + +I Q S
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 102 VLDHIEKRENFETPEFIFID-LIKTYADAHRFQDSVNLFYKI--PKFRINRVGFAIEILN 158
VL I KR P+ + ++ LIK + + +++ K+ F++N+V +A I
Sbjct: 116 VLAKILKRG--YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 173
Query: 159 -CMINDGFC-------VDGKTC-------SLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
C I D +DG+ + I+ ++C+ + +S E G EM G
Sbjct: 174 VCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVS--EAYGLFSEMAVKGIS 231
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y +I K+ +A+G+LN+M I P++ Y ++++ + + +A+ +
Sbjct: 232 ADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+L + PDV TY+ ++G V+ + M +G PDV TY L+ CK
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ ++ L KEM K +V + TYS +IDGL G I L++E ++G
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVIT 411
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ G + +A+ L +M D+++ P + LL
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILL 451
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 145/301 (48%), Gaps = 15/301 (4%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL-NCMINDGFCVDGKTCSLILSSVC 180
LI + + ++++ L ++ IN + IL + + +G + K+ ++ C
Sbjct: 240 LIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC 299
Query: 181 EQRDLSSDELL--GF--VQEMKKLGFCFGMVD----------YTNVIRSLVKKEKVFDAL 226
+ D+ + L G+ V E+KK F + YT +I K + V +AL
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ +M + P IV Y+ +++G+ +L DE+ G DV TY+ I+GL
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGL 419
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK +++ I + M++ +P++ T+ LL LCK L +E+ +++ KG LN+
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY++MI+G +G + EA +L + + G + F+ I L ++ KA +LL+Q
Sbjct: 480 YTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQ 539
Query: 407 M 407
M
Sbjct: 540 M 540
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 100/173 (57%), Gaps = 2/173 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S ++ +C+ +S + + EM+ G ++ Y+++I L K + A+ + N
Sbjct: 376 TYSSLIDGLCKSGRISY--VWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFN 433
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK I+P+I +T++L+G+ A+E+F +LL G +VYTYNV ING CKQ
Sbjct: 434 KMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQG 493
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+E + M++ ME+ G P+ T+ T++ AL K E ++ +L+++M +G++
Sbjct: 494 LLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%)
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ V DA+ N+M P I+ + +L+ + Y A L L + G+ PD+ T
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ IN C + G ++A + + G PD +T NTL++ LC ++ + ++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G LN +Y+ +I+G+ GD A L + + M++ I +C+ LV +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L +MA K +S + L+
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLI 241
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + V A + N M G D T +++++ C+ + + DE L +EM +
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV--DEALNLFKEMHQKNMVP 372
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G+V Y+++I L K ++ ++++M+ G D++ Y+ +++G+ +A LF
Sbjct: 373 GIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 432
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ + P+++T+ + ++GLCK ++ ++ + G +V TYN ++ CK
Sbjct: 433 NKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L ++ +M+ G + N T+ +I L K + +A LL + + +GL
Sbjct: 493 GLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 140/280 (50%), Gaps = 4/280 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFC 203
R ++ A + + M+ G T + ++S +C+ DL+ ++ L G M K G
Sbjct: 253 IRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGL---MAKAGIA 309
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ Y I+ L K ++ DA+ + +M G+ P+ V T +++ + D EL
Sbjct: 310 PDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLEL 369
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E+ G+ D+ YN +NG C+ +++A ++ M + G KPD +TY TL+ CK
Sbjct: 370 RWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCK 429
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
EL+ E+ +EM +G+ L+ TY+ +I GL+ G ++A +L E + GL ++
Sbjct: 430 EGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTT 489
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I C+ G V+ + LK+M +K +PG + ++
Sbjct: 490 YTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVM 529
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++R +++ K+ A + ++M G++P +V + +++G+ D A L +
Sbjct: 245 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 304
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ PDVYTY +I GLCK ++ ++M M E G P+ + TL+ A CK ++
Sbjct: 305 KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVT 364
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL EM +G+ +L Y+ +++G D+ A ++EE GL + I
Sbjct: 365 AGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLI 424
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G C+ G + A+E+ ++M+D+ V+ + A L+S +SK
Sbjct: 425 DGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA-LISGLSK 464
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 161/368 (43%), Gaps = 25/368 (6%)
Query: 55 QQIPKQPHILSSLLHSFSIYNCEPPPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENF 112
++P P + LH + + PPEA F +++ + + + +V D + +R
Sbjct: 218 NRLPSVPEAYAFYLH---LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRR-GV 273
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNL------------FYKIPKF-----RINRVGFAIE 155
+ F L+ A ++ L Y F + R+ A+E
Sbjct: 274 QPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAME 333
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ M G + + ++ + C++ D+++ L EM G +V Y ++
Sbjct: 334 MFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAG--LELRWEMATRGVKADLVAYNALVNG 391
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ + A I+ +M+ DG+KPD V YT +++G + + A E+ E+ G+ D
Sbjct: 392 FCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALD 451
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TY I+GL K +++ M E G +PD TY ++ A CK ++ + +K
Sbjct: 452 DVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLK 511
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM+ KG + TY+++++G S G + A LL LN G+C ++ + G C+ G
Sbjct: 512 EMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHG 571
Query: 396 LVRKALEL 403
VR EL
Sbjct: 572 KVRDTEEL 579
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ P+ + M++ +I A +FDE+L G+ P V T+N ++G+CK +++
Sbjct: 237 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 296
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ M + G PDV TY +Q LCK + E+ +EM +G+ N + +ID
Sbjct: 297 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 356
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+GD+ L E +G+ ++ + G C+ ++ A +++++M + P
Sbjct: 357 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 416
Query: 416 ARVWEALL 423
+ L+
Sbjct: 417 KVTYTTLI 424
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A + LL G+ P+ +N+ + + + + + + M G +P V+T+NTL+
Sbjct: 225 EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 284
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
+CK +LN L M GI ++ TY I GL G I +A + EE +GL
Sbjct: 285 SGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 344
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + I C+ G V LEL +MA + V + AL+
Sbjct: 345 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALV 389
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 166/372 (44%), Gaps = 28/372 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
SLL + C P + +IK L + + V+D + E+ +P+ I F ++
Sbjct: 157 SLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLD 216
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
R D+ N+F + + R N V ++ I DG LS + +
Sbjct: 217 GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI-----------DG------LSKMAKM 259
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
DE L + +M +LG V Y+ V+ L+K ++ DA+ +L QM+ G PD V
Sbjct: 260 -----DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAV 314
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++G ++ +A L E+L G P V TY +GLC+ + ++++ M
Sbjct: 315 TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM 374
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL-NLQTYSIMIDGLASKGD 361
G P+ ITY++++ LCK + ++M +V ++ YS +IDGL G
Sbjct: 375 AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGK 434
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
I EA LE + G F I GLC G + LEL + MA++ P +
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494
Query: 422 LL--LSSVSKLD 431
L+ L S++D
Sbjct: 495 LVDRLCRASRVD 506
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 127/239 (53%), Gaps = 2/239 (0%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM--KSDGIKPDIVCY 244
S E +++M G ++ + +I+ L K+ ++ A ++++M G+ PD++ +
Sbjct: 152 SKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITF 211
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
VL+G+ ++ + A +F L G P+V TY+ I+GL K ++ ++++A M E
Sbjct: 212 NSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 271
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
LG + + +TY+T++ L KV + ++++M+ G + + TY+ +IDG + + E
Sbjct: 272 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 331
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A GLL E L G + GLC+ G +A+E+L MA + +P A + +++
Sbjct: 332 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 390
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 142/287 (49%), Gaps = 13/287 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-----DELLGFVQEMKKLGFCFGMV 207
A +L M +G + T LI+ +C++ ++ + DE+ M + G ++
Sbjct: 155 AFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMF-----MIESGLSPDVI 209
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +V+ L K++++ DA + + G +P++V Y+ +++G+ +A +L ++
Sbjct: 210 TFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 269
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ LG + TY+ ++GL K +E + ++ M + G PD +TYNTL+ K + L
Sbjct: 270 VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRL 329
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
L++EM G ++ TY+ + GL G EA +L+ +G + +
Sbjct: 330 REAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSI 389
Query: 388 ICGLCQRGLVRKALELLKQMA-DKDVSPGARVWEALL--LSSVSKLD 431
+ GLC+ G V +AL ++MA D+ V+P + AL+ L K+D
Sbjct: 390 VDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKID 436
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILN 158
S+V+D + K E + +++ DA D+V I F + R+ A+ +L
Sbjct: 282 STVVDGLLKVGRMEDA----VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 337
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M+ GF T + + +C R DE + + M G + Y++++ L K
Sbjct: 338 EMLEAGFHPSVVTYTTLCHGLC--RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 395
Query: 219 KEKVFDALGILNQMKSDGI-KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
+V +ALG +M D + P ++ Y+ +++G+ +A E + ++ G +PDV
Sbjct: 396 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVV 455
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
T+++ INGLC ++ G+++ M E G PD++TY TL+ LC+ ++ +L ++M
Sbjct: 456 TFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQM 515
Query: 338 KWKGIVLNLQTYSIMIDGL 356
+ G+ + T MI GL
Sbjct: 516 RSDGLSPDRSTRRTMIHGL 534
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 129/262 (49%), Gaps = 7/262 (2%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ +C+ R + D+ + ++M +V Y +I L K+ +V +A + + ++
Sbjct: 1 MIDGLCKSRKV--DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARA 58
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV-LGLVPDVYTYNVYINGLCKQNNVE 293
G P +V Y +++G+ A L+D++ + G P V TY+ I+GLC+ + V+
Sbjct: 59 KGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVD 118
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G K++ M G P+ +TYNTL+ AL L+++M G L T+ ++I
Sbjct: 119 KGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLII 178
Query: 354 DGLASKGDIIEACGLLEE--ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
GL +G+I A +++E + GL F+ + GLC+ + A + K+ ++
Sbjct: 179 KGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238
Query: 412 VSPGARVWEALL--LSSVSKLD 431
P + L+ LS ++K+D
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMD 260
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 123/248 (49%), Gaps = 3/248 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
++ R+ A+ +L M + G D T + ++ +++ L E +G ++EM + GF
Sbjct: 289 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR--EAVGLLREMLEAGFHP 346
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V YT + L + + +A+ IL+ M + G P+ + Y+ +++G+ +A F
Sbjct: 347 SVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYF 406
Query: 265 DELLVLGLV-PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+++ +V P V Y+ I+GLCK ++ + + M G PDV+T++ L+ LC
Sbjct: 407 EKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCD 466
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
++ EL + M +G V ++ TY+ ++D L + EA L ++ + GL S
Sbjct: 467 AGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRST 526
Query: 384 FDETICGL 391
I GL
Sbjct: 527 RRTMIHGL 534
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 3/180 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF- 204
R R A+EIL+ M G + T S I+ +C+ ++ E LG+ ++M +
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVT--EALGYFEKMARDEVVAP 417
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ Y+ +I L K K+ +A L +M G PD+V +++++NG+ ELF
Sbjct: 418 HVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELF 477
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ G VPD+ TY ++ LC+ + V+ + M G PD T T++ L +V
Sbjct: 478 RGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEV 537
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 26/242 (10%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
++Q++ + +L +L + P Y + L + +F + +LD++ R
Sbjct: 325 KRQRLREAVGLLREMLEA----GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC- 379
Query: 113 ETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT 171
P I + ++ A R +++ F K+ + + V + + +I DG C GK
Sbjct: 380 -APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV--VAPHVIAYSALI-DGLCKAGKI 435
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
DE F++ M + G +V ++ +I L ++ L +
Sbjct: 436 ----------------DEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M G PD+V Y +++ + +A +LF ++ GL PD T I+GL + N
Sbjct: 480 MAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNR 539
Query: 292 VE 293
E
Sbjct: 540 DE 541
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 168/345 (48%), Gaps = 26/345 (7%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQD 134
C P Y+ +I L + + + +L+ E + P+ F + LI + + + D
Sbjct: 111 CVPTAVTYNSLISGLCKAERASEAYDLLE--EMVYSGCIPDIFTYTTLITGFCKSKKSDD 168
Query: 135 SVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCVDGK-TCSLIL 176
++ +F ++ FR + V + AI++ MI G C+ T + ++
Sbjct: 169 ALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 228
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
S C + DE + ++ M + G +V YT ++ K ++ DA +LNQM G
Sbjct: 229 SGFCRMGKM--DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 286
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ PD+V +T +++G+ + A + E+ P VYTYN ++G C+ N +E
Sbjct: 287 LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEAR 346
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K + +EE+ P+V+++N +++ LCKV + ELV+E + + ++ Y+ +IDGL
Sbjct: 347 KFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGL 404
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKA 400
+ + EAC + + L + C +S+ + + GLC G++ +A
Sbjct: 405 CREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA 449
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 4/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A+ L M++ GF D T + ++ ++C + L E F++EM
Sbjct: 23 KVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH--EARKFLEEMANRNLTPN 80
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT +I L K +V +A+ +L++M+ + P V Y +++G+ E +A +L +
Sbjct: 81 VVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLE 139
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G +PD++TY I G CK + +++ + G +PDV+TY+ L+ LCK
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199
Query: 326 ELNRLRELVKEMKWKGIVL-NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L +L M G + N TY+ +I G G + EA LLE G +
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C+ + A +LL QM K ++P + +L+
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 138/278 (49%), Gaps = 6/278 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GM 206
NR+ A + L M N + T ++++ +C+ + DE + + +M+K C
Sbjct: 60 NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRV--DEAVALLSKMRKK--CVPTA 115
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K E+ +A +L +M G PDI YT ++ G + A +F++
Sbjct: 116 VTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQ 175
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITYNTLLQALCKVR 325
L+ G PDV TY+ I+GLCK+ ++ I + M + GS P+ +TYN+L+ C++
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ L++ M G ++ TY+ +++G + +A LL + KGL F
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ + A+ +L +M K SP + +L
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 137/268 (51%), Gaps = 6/268 (2%)
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
D T + ++ +C+ + L ++ L F+ +M GF + YT VI +L + ++ +A
Sbjct: 9 ADFVTYTSLIQGLCKVKRL--EQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
L +M + + P++V YT++++G+ +A L ++ VP TYN I+GL
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGL 125
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK ++ M G PD+ TY TL+ CK ++ + + +++ +G ++
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLK 405
TYS +IDGL +G + EA L + G C +++ ++ I G C+ G + +A+ LL+
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245
Query: 406 QMADKDVSPGARVWEALL--LSSVSKLD 431
+MA+ SP + L+ +++LD
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLD 273
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 149/363 (41%), Gaps = 59/363 (16%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL C P Y +I ++ + D V + + R F + LI
Sbjct: 137 LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR-GFRPDVVTYSCLIDGL 195
Query: 127 ADAHRFQDSVNLFYKIPKF------------------RINRVGFAIEILNCMINDGFCVD 168
R +++++LF ++ K R+ ++ A+ +L M G D
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + +++ C+ L D+ + +M + G +V +T+++ L ++ ++ DA+ I
Sbjct: 256 VVTYTTLMNGFCKLARL--DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE------------LLVLGLV--- 273
L +M+ P + Y +L+G +A + E +++ GL
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN 373
Query: 274 ------------------PDVYTYNVYINGLCKQNNVEAGIKMIACM-EELGSKPDVITY 314
PDV Y I+GLC++ V+ ++ M EE G P+ ITY
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+TL+ LC L+R R ++ KG V N+ TY+++ID +A LL++ +
Sbjct: 434 STLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489
Query: 375 KGL 377
+G
Sbjct: 490 RGF 492
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 157/339 (46%), Gaps = 27/339 (7%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV-------- 150
+E + N + ++F LI Y ++ +D+V + + +P +V
Sbjct: 62 LETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLK 121
Query: 151 ------GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
GF E L C G+ +++ C++ D+ + + K G
Sbjct: 122 YFKLVWGFYEEFLEC----GYPASLYFFNILXHRFCKEGDIRVAQ--SVFDAITKWGLRP 175
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y ++ ++ + + + + M + G+ PD+ Y++++NG+ + A ELF
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELF 235
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+LV GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+LN+ +L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 296 GDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLCQ G A +++++M + P + ++
Sbjct: 356 TALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMII 394
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ + CK+ ++ + + + G +P V++YNTL+
Sbjct: 129 FYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
++ +L+ +L M G+ ++ TYS++I+GL + + A L +E L KGL
Sbjct: 189 RLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGV 248
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
F I G C+ G V A+E+ KQM + + P + L+ K D
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 2/208 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+++ A E+ + M+ G +G T + ++ C+ + D + ++M ++
Sbjct: 226 SKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLLPDLI 283
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L KK + A ++++M G+KPD + YT +++G + D A E +
Sbjct: 284 TYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRM 343
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + D Y I+GLC++ KM+ M +G KPD TY ++ +CK ++
Sbjct: 344 IQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDV 403
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ +L+KEM+ G ++ TY+++++G
Sbjct: 404 GKGSKLLKEMQXDGHAPSVVTYNVLMNG 431
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 174/349 (49%), Gaps = 23/349 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSV 136
P Y+ ++++L ++ + + VLD +RE + P+ I + LI+ + DS
Sbjct: 206 PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECY--PDVITYTILIEATCN-----DS- 257
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
VG A+++L+ M G D T +++++ +C++ L DE + F+
Sbjct: 258 ------------GVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL--DEAIKFLNN 303
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M G ++ + ++RS+ + DA +L+ M G P +V + +++N + +
Sbjct: 304 MPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRL 363
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A ++ +++ G VP+ +YN ++G C++ ++ I+ + M G PD++TYNT
Sbjct: 364 LGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 423
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL ALCK +++ E++ ++ KG L TY+ +IDGL G A LLEE KG
Sbjct: 424 LLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKG 483
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L + + GL + G V +A+++ M + P A + A++L
Sbjct: 484 LKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 139/280 (49%), Gaps = 5/280 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + A I+ + N G D T ++++ C+ S E+ ++ ++++
Sbjct: 153 RSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCK-----SGEIDKALEVLERMSVAPD 207
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++RSL K+ +A+ +L++ PD++ YT+++ +A +L D
Sbjct: 208 VVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLD 267
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PDV TYNV ING+CK+ ++ IK + M G KP+VIT+N +L+++C
Sbjct: 268 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTG 327
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L+ +M KG ++ T++I+I+ L K + A +LE+ G S ++
Sbjct: 328 RWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYN 387
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G CQ + +A+E L+ M + P + LL +
Sbjct: 388 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 427
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 141/291 (48%), Gaps = 21/291 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ Y C+P ++ +++++ ++ D +L + ++ +P + +++ +
Sbjct: 300 FLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGC--SPSVVTFNILINF 357
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R +G AI++L M G + + + +L C+++ +
Sbjct: 358 LCRKRL-----------------LGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKM- 399
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + +++ M G +V Y ++ +L K KV A+ ILNQ+ S G P ++ Y
Sbjct: 400 -DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNT 458
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ A EL +E+ GL PD+ TY+ + GL ++ V+ IK+ ME L
Sbjct: 459 VIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLS 518
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
KP +TYN ++ LCK ++ +R + + M KG TY+I+I+G+A
Sbjct: 519 IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIA 569
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 5/237 (2%)
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+R LV+ ++ + L L +M G PD++ T ++ G KA + + L G
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPDV TYNV I G CK ++ K + +E + PDV+TYNT+L++LC +L E
Sbjct: 173 VPDVITYNVLIGGYCKSGEID---KALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAME 229
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ + ++ TY+I+I+ + + +A LL+E KG ++ I G+C
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 289
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+ G + +A++ L M P +L S S +++ RL+ +L C
Sbjct: 290 KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAE--RLLSDMLRKGC 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 152/360 (42%), Gaps = 40/360 (11%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQD 134
C P Y +I+ +S +LD E R+ P+ + + LI R +
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLD--EMRKKGCKPDVVTYNVLINGICKEGRLDE 296
Query: 135 SVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDG---------KTCS-------LIL 176
++ +P + + N + I IL M + G +D K CS +++
Sbjct: 297 AIKFLNNMPSYGCKPNVITHNI-ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILI 355
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C +R L + +++M K G + Y ++ +++K+ A+ L M S G
Sbjct: 356 NFLCRKRLLG--RAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 413
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
PDIV Y +L + A E+ ++L G P + TYN I+GL K E +
Sbjct: 414 CYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAV 473
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G KPD+ITY+TLL+ L + +++ ++ +M+ I + TY+ ++ GL
Sbjct: 474 ELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 533
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL----------------CQRGLVRKA 400
A L + KG + + I G+ C RG V+K+
Sbjct: 534 CKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEEALELLNELCSRGFVKKS 593
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 86/174 (49%), Gaps = 5/174 (2%)
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
+ N+++ L + +E G+K + M G PDVI +L++ C+ + + +++
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
++ G V ++ TY+++I G G+I +A +LE + ++ + LC G
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
+++A+E+L + ++ P + L+ ++ + D ++L+D++ CK
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCN--DSGVGQAMKLLDEMRKKGCK 275
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 119/236 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ L + ++MK G V YT +I + + +AL + ++M G D+V Y +
Sbjct: 254 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 313
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG+ ++ +A+ELF E+ G+ PD YT+ ING K N+ + + M +
Sbjct: 314 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 373
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPDV+TYNTL+ CK E+ ++ EL +M + I N +Y I+I+G + G + EA
Sbjct: 374 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 433
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E + KG + + G C+ G KA E L M K + P + L+
Sbjct: 434 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 489
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 160/324 (49%), Gaps = 19/324 (5%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNC 159
+F L++TY A + ++ F + ++ V A EI
Sbjct: 28 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
++ G V+ T +++++++C+ + + + + F+ +M++ G +V Y +I + ++
Sbjct: 88 VVRSGVQVNVYTLNIMINALCKNQKIENTK--SFLSDMEEKGVFPDVVTYNTLINAYCRQ 145
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A +++ M G+KP + Y ++NG+ Y++A+ + DE+L +G+ PD TY
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ + C+ +N+ ++ M G PD+++++ L+ L K L++ + ++MK
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ + Y+I+I G G + EA + +E L +G ++ + GLC+ ++ +
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 325
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A EL +M ++ V P + L+
Sbjct: 326 ADELFTEMTERGVFPDFYTFTTLI 349
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 140/278 (50%), Gaps = 4/278 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A+++ + M+ G +D T + IL+ +C+++ LS +DEL EM + G +T
Sbjct: 291 ALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELF---TEMTERGVFPDFYTFTT 347
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K + A+ + M +KPD+V Y +++G + K EL+++++
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRR 407
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ +Y + ING C V ++ M E G + +IT NT+++ C+ +
Sbjct: 408 IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKAD 467
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E + M KGIV + TY+ +I+G + ++ A L+ + N GL ++ + G
Sbjct: 468 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 527
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++G +++A ++ +M ++ V+P + +L+ V++
Sbjct: 528 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQ 565
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 139/317 (43%), Gaps = 39/317 (12%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G D T + ++++ C Q L +E + M G + Y +I L K K
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLL--EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 184
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT----- 278
A G+L++M G+ PD Y ++L ++ + AE +FDE+ G+VPD+ +
Sbjct: 185 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 244
Query: 279 ------------------------------YNVYINGLCKQNNVEAGIKMIACMEELGSK 308
Y + I G C+ + +K+ M E G
Sbjct: 245 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCV 304
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
DV+TYNT+L LCK + L+ EL EM +G+ + T++ +I+G + G++ +A L
Sbjct: 305 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 364
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
E + + L ++ I G C+ + K EL M + + P + +L++
Sbjct: 365 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN-HISYGILINGYC 423
Query: 429 KLDFVNTSFIRLVDQIL 445
+ V+ +F RL D+++
Sbjct: 424 NMGCVSEAF-RLWDEMV 439
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 86/171 (50%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y +I V +A + ++M G + I+ ++ G + VKA+E
Sbjct: 413 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 472
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L+ G+VPD TYN ING K+ N++ ++ ME G PDVITYN +L +
Sbjct: 473 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 532
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ ++ +M +G+ + TY+ +I+G ++ ++ EA + +E L +G
Sbjct: 533 MQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 583
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRD-LSSDELLGFVQEMKKLGFCFGMVDYTN 211
A + + M+ GF TC+ I+ C + + +DE F+ M G + Y
Sbjct: 431 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE---FLSNMLLKGIVPDGITYNT 487
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I +K+E + A ++N+M++ G+ PD++ Y ++LNG Q +AE + +++ G
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ PD TY ING QNN++ ++ M + G PD
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 30/284 (10%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFY 140
Y+ ++ L + + + + +R F P+F F LI Y+ +V LF
Sbjct: 309 TYNTILNGLCKEKMLSEADELFTEMTERGVF--PDFYTFTTLINGYSKDGNMNKAVTLFE 366
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCSLILSSV 179
+ + + + N +I DGFC + + ++++
Sbjct: 367 MMIQRNLKP---DVVTYNTLI-DGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 422
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C +S E EM + GF ++ +++ + A L+ M GI P
Sbjct: 423 CNMGCVS--EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP 480
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D + Y ++NG I +E+ +A L +++ GL+PDV TYNV +NG +Q ++ ++
Sbjct: 481 DGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIM 540
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
M E G PD TY +L+ L + EM +G V
Sbjct: 541 LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 584
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 257 YVKAEEL------FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
YV+A +L F L GL + N + GL K V+ ++ + G + +
Sbjct: 37 YVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVN 96
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V T N ++ ALCK +++ + + +M+ KG+ ++ TY+ +I+ +G + EA L++
Sbjct: 97 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 156
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
KGL ++ I GLC+ G +A +L +M +SP + LL+
Sbjct: 157 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLV 210
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 136/264 (51%), Gaps = 3/264 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
FR ++ A L MI GF D TC+LIL+++CE + + + + ++M LGF
Sbjct: 829 FRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV--NRAIWYFRKMIDLGFKP 886
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++++T++I L KK + A +L +M +G KP++ +T +++G+ + KA LF
Sbjct: 887 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 946
Query: 265 DELLVLGLV-PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+L+ P+V+TY I G CK++ + + + M+E G P+V TY TL+ CK
Sbjct: 947 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 1006
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
R EL+ M +G + N+ TY+ ID L K EA LL +A + GL
Sbjct: 1007 AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 1066
Query: 384 FDETICGLCQRGLVRKALELLKQM 407
+ I C++ + +AL +M
Sbjct: 1067 YTILIQEQCKQNDINQALAFFCRM 1090
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 8/262 (3%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
L + +D + + T + ++ C++ L+ E+L MK+ G + YT +I
Sbjct: 946 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML--FSRMKEQGLFPNVNTYTTLING 1003
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K A ++N M +G P+I Y ++ + + +A EL ++ GL D
Sbjct: 1004 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 1063
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC---KVRELNRLRE 332
TY + I CKQN++ + M + G + D+ N L+ A C K++E RL +
Sbjct: 1064 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 1123
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LV + G++ +TY+ MI +GDI A G S + I GLC
Sbjct: 1124 LVVSL---GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 1180
Query: 393 QRGLVRKALELLKQMADKDVSP 414
++ +V +A +L + M D+ +SP
Sbjct: 1181 KKSMVDEACKLYEAMIDRGLSP 1202
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++R+ + ++ +A+G++ M++ G+ P + VL + AE +FDE+ V G
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+VPD +Y + + G + ++ + + M + G PD T +L ALC+ +NR
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
++M G NL ++ +IDGL KG I +A +LEE + G I GL
Sbjct: 874 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933
Query: 392 CQRGLVRKALELLKQMADKDV-SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
C+RG KA L ++ D P + +++ KL+ F R+ +Q L
Sbjct: 934 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 990
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 9/241 (3%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E +G V +M+ G + V+ V+ + A + ++M G+ PD Y ++
Sbjct: 765 NEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLM 824
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G +A+ ++ G +PD T + + LC+ V I M +LG
Sbjct: 825 VIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGF 884
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KP++I + +L+ LCK + + E+++EM G N+ T++ +IDGL +G +A
Sbjct: 885 KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 944
Query: 368 LL-----EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
L + + T +SM I G C+ + +A L +M ++ + P + L
Sbjct: 945 LFLKLVRSDTYKPNVHTYTSM----IGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 1000
Query: 423 L 423
+
Sbjct: 1001 I 1001
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R A E+LN + G DG T ++++ C+Q D+ ++ L F M K GF M
Sbjct: 1043 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI--NQALAFFCRMNKTGFEADMR 1100
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+I + +++K+ ++ + + S G+ P YT +++ + D A + F +
Sbjct: 1101 LNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM 1160
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
G VPD +TY I+GLCK++ V+ K+ M + G P +T TL CK
Sbjct: 1161 KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 1216
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 134/265 (50%), Gaps = 4/265 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
MI++G T ++ C Q DL + E+ EM+ G ++ YT +IR L
Sbjct: 173 MISNGLSPSVITFGTLIDGCCRQGDLLRAQEMF---DEMRVKGIVPTVIVYTILIRGLCS 229
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
K+ +A + M+ G+ P++ Y +++G + +A L+ ++L GLVPDV T
Sbjct: 230 DNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVT 289
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+ + I+GLCK ++A + M + P++ YN+L+ A CKV +++ L E++
Sbjct: 290 FGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELE 349
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+ ++ TYSI+I GL S EA + E+ +G+ S ++ I G C+ G +
Sbjct: 350 RFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMD 409
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
KALE+ QM + V P + L+
Sbjct: 410 KALEICSQMTENGVEPNVITFSTLI 434
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 126/236 (53%), Gaps = 3/236 (1%)
Query: 211 NVIRSLVKKEKVFDAL-GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
NV+ ++ K F+ L I +M S+G+ P ++ + +++G Q D ++A+E+FDE+ V
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+VP V Y + I GLC N +E M M E+G P+V TYNTL+ CK+ +
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L ++M +G+V ++ T+ I+IDGL G++ A L + + ++++ I
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
C+ G V +A+ L ++ +VSP + L+ L SVS+ + F ++ +
Sbjct: 331 AYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKE 386
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 130/254 (51%), Gaps = 2/254 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + M+ +G D T +++ +C+ ++ + L FV M K + Y ++
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNL-FVN-MIKFSVTPNIAVYNSL 328
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K V +A+ + +++ + PD+ Y++++ G+ +A +F+++ G+
Sbjct: 329 IDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGI 388
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ + TYN I+G CK+ ++ +++ + M E G +P+VIT++TL+ CK+R L
Sbjct: 389 LANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMG 448
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM K + ++ TY+ MIDG G + EA L + L+ G+ + GLC
Sbjct: 449 IYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLC 508
Query: 393 QRGLVRKALELLKQ 406
+ G + ALEL +
Sbjct: 509 KDGKISDALELFTE 522
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 112/238 (47%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
++ + L Q+M G +V + +I L K ++ A + M + P+I Y
Sbjct: 267 NAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYN 326
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++ D +A LF EL + PDV+TY++ I GLC + E + M +
Sbjct: 327 SLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKE 386
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G + +TYN+L+ CK ++++ E+ +M G+ N+ T+S +IDG ++ A
Sbjct: 387 GILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAA 446
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ E + K L + I G C+ G +++AL+L M D ++P LL
Sbjct: 447 MGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLL 504
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 15/262 (5%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ + C+ D+S E + E+++ + Y+ +IR L + +A I +M
Sbjct: 328 LIDAYCKVGDVS--EAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTK 385
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+GI + V Y +++G + KA E+ ++ G+ P+V T++ I+G CK N++A
Sbjct: 386 EGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQA 445
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ + + M PDV+TY ++ CK + +L +M GI N T S ++D
Sbjct: 446 AMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLD 505
Query: 355 GLASKGDIIEACGLLEEAL-------------NKGLCTQSSMFDETICGLCQRGLVRKAL 401
GL G I +A L E + +K T + I GLCQ G KA+
Sbjct: 506 GLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAV 565
Query: 402 ELLKQMADKDVSPGARVWEALL 423
+L M + P ++ +L
Sbjct: 566 KLFSDMRRYGLQPDEVIYVVML 587
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 40/297 (13%)
Query: 98 DISSVLDHIEKRENFE-TPE-FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGF- 152
D+S + + E FE +P+ F + LI+ R +++ N+F K+ K I N V +
Sbjct: 337 DVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYN 396
Query: 153 --------------AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
A+EI + M +G + T S ++ C+ R+L + +G EM
Sbjct: 397 SLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAA--MGIYSEMV 454
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM--VLNGVIVQED 256
+V YT +I K + +AL + + M +GI P+ CYT+ +L+G+
Sbjct: 455 IKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPN--CYTISCLLDGLCKDGK 512
Query: 257 YVKAEELFDELLVL----------GLVPDV---YTYNVYINGLCKQNNVEAGIKMIACME 303
A ELF E + G P + Y I+GLC+ +K+ + M
Sbjct: 513 ISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMR 572
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
G +PD + Y +L+ L +V+ + L L +M G++ N + I+ + G
Sbjct: 573 RYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESG 627
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 137/296 (46%), Gaps = 40/296 (13%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + A+++ + M G D KT ++++ +C+ R L K G C G V
Sbjct: 1030 NGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTG----LAIKLHEKMKGNCKGDV 1085
Query: 208 -DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y +I +L K +AL + ++M GI PD+V Y+ +++G+ +A E F E
Sbjct: 1086 FTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKE 1145
Query: 267 LLVLGLVPDVYTYN-----------------------------------VYINGLCKQNN 291
+ G+ DVYTYN + I+GLCK+
Sbjct: 1146 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 1205
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
V +++ M G +PD++TYNTL+ LC V +L +L + + +GI LN+ +Y+I
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 1265
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+I+G I EA EE KGL + ++ I LCQ G VR A +L +M
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 1321
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 37/304 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ A+E M G D T + ++ + R E+ F+ M GF
Sbjct: 1132 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL--SRAGLWKEVTWFLNLMVDRGFSPD 1189
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+T +I L K+ KV +A IL M+ G +PDI+ Y ++NG+ + A +LF+
Sbjct: 1190 AFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 1249
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L G+ +V++YN+ ING CK ++ + M G KP +TYNTL+ ALC+
Sbjct: 1250 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSG 1309
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA-------------------- 365
+ ++L EM+ G L L TY +++DGL G + EA
Sbjct: 1310 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFS 1369
Query: 366 --------CGLLEEALNK-------GLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
G LEEA + GL + ++ I GLC +G++ +A++LL QM +K
Sbjct: 1370 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 1429
Query: 411 DVSP 414
P
Sbjct: 1430 GCLP 1433
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 148/314 (47%), Gaps = 38/314 (12%)
Query: 147 INRVGFAIEI---LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE-------------- 189
++R G E+ LN M++ GF D T ++++ +C++ + +
Sbjct: 1165 LSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224
Query: 190 ------------LLGFVQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
L+G +++ KL G + Y +I K +K+ +A
Sbjct: 1225 ILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFE 1284
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+M+ G+KP V Y ++ G + Q V+ A++LF E+ G + TY V ++GLCK
Sbjct: 1285 EMRPKGLKPSTVTYNTLI-GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN 1343
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
++E + + +++ KP++ ++ LL +C+ +L + E+ G+ + Y
Sbjct: 1344 GHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAY 1403
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+I+I+GL +KG + EA LL + KG S F+ I L + + +A++LL++M +
Sbjct: 1404 NILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRN 1463
Query: 410 KDVSPGARVWEALL 423
++ SP V LL
Sbjct: 1464 RNFSPDEAVTSMLL 1477
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 3/247 (1%)
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
K GF V T +++ + + + DA+ + ++M G+ D Y +++NG+
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTG 1068
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
A +L +++ DV+TY + I+ LCK + M + M G PDV+ Y++L+
Sbjct: 1069 LAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LC+ L E KEM+ +GI ++ TY+ +I GL+ G E L +++G
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTS 436
+ F I GLC+ G V +A ++L+ M K P + L+ L V +L+
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247
Query: 437 FIRLVDQ 443
F L D+
Sbjct: 1248 FESLADR 1254
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 142/313 (45%), Gaps = 25/313 (7%)
Query: 80 PEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSV 136
P+A+ F +I L + + + +L+ + R + P+ + + L+ + +D+
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELM--RHKGKEPDILTYNTLMNGLCLVGQLEDAT 1245
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
LF + I F+ IL IN G+C D K DE F +E
Sbjct: 1246 KLFESLADRGIKLNVFSYNIL---IN-GYCKDQKI----------------DEAFRFFEE 1285
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M+ G V Y +I +L + +V A + +M++ G + Y ++L+G+
Sbjct: 1286 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH 1345
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A +LF + P++ +++ ++G+C+ +E K + + G +PD I YN
Sbjct: 1346 LEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 1405
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LC L+ +L+ +M+ KG + + T++++I L + +I EA LLEE N+
Sbjct: 1406 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN 1465
Query: 377 LCTQSSMFDETIC 389
++ +C
Sbjct: 1466 FSPDEAVTSMLLC 1478
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 40/240 (16%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
K+ DA+ + ++ P + +L V Y ++ ++ +G+ PD+YT N
Sbjct: 926 KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985
Query: 281 VYIN-----------------------------------GLCKQNNVEAGIKMIACMEEL 305
+ I+ G+ +N + +++ M +
Sbjct: 986 ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKW--KGIVLNLQTYSIMIDGLASKGDII 363
G D TY L+ LCK R+ +L ++MK KG V TY ++ID L G
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVF---TYGMIIDALCKDGMTT 1102
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EA + E + G+ ++ + GLC+ G +++ALE K+M + +S + +L+
Sbjct: 1103 EALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 1162
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I +L K + V +A G+ ++M + GI D+V YT ++ G + +A L +E++
Sbjct: 202 YNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMV 261
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ + P+VYTYN+ ++ LCK+ V+ ++A M + KPDVITY+TL+ V EL
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELK 321
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK----GLCTQSSMF 384
+ + + M G+ ++ +Y+I+I+G + EA L +E K G+ T SS+
Sbjct: 322 KAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
D GLC+ G + +L+ +M D+ + + +L+ L LD F ++ D
Sbjct: 382 D----GLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKD 437
Query: 443 QILNTPC 449
Q + PC
Sbjct: 438 QGIR-PC 443
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 131/251 (52%), Gaps = 2/251 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G D T + ++ C L E +G + EM + Y ++ +L K+
Sbjct: 225 MTAKGISADVVTYTTLIYGFCIASKLK--EAIGLLNEMVLKTINPNVYTYNILVDALCKE 282
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
KV +A +L M +KPD++ Y+ +++G + + KA+ +F+ + ++G+ PDV++Y
Sbjct: 283 GKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSY 342
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ING CK V+ + + M + P ++TY++L+ LCK ++ + +L+ EM+
Sbjct: 343 TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRD 402
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+GI N+ TY+ +IDGL G + A L + ++G+ S F + GLC+ G ++
Sbjct: 403 RGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKD 462
Query: 400 ALELLKQMADK 410
A E + + K
Sbjct: 463 AQEAFQDLLTK 473
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S ++ +C+ +S + + EM+ G ++ Y ++I L K + A+ + N
Sbjct: 376 TYSSLIDGLCKSGRISY--VWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFN 433
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK GI+P +T++L+G+ A+E F +LL G DVY YNV ING CKQ
Sbjct: 434 KMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQG 493
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+E + M++ MEE G P+ +T++ ++ AL K E ++ +L+++M +G++
Sbjct: 494 LLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 114/253 (45%), Gaps = 35/253 (13%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI------------------------ 241
++ + ++ S K + A+ + ++++ GI+PD+
Sbjct: 59 IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 242 -----------VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ +T ++ G+ ++ KA D+LL G+ D +Y ING+CK
Sbjct: 119 KILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIG 178
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ IK++ ++ +KP+V YNT++ ALCK + ++ L EM KGI ++ TY+
Sbjct: 179 DTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYT 238
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I G + EA GLL E + K + ++ + LC+ G V++A +L M
Sbjct: 239 TLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKA 298
Query: 411 DVSPGARVWEALL 423
V P + L+
Sbjct: 299 CVKPDVITYSTLM 311
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 112/225 (49%), Gaps = 2/225 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + N M G D + +++++ C+ + + DE L +EM + G+V Y+++
Sbjct: 323 AQHVFNAMSLMGVTPDVHSYTILINGFCKNKMV--DEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K ++ ++++M+ GI +++ Y +++G+ +A LF+++ G+
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI 440
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P +T+ + ++GLCK ++ + + G DV YN ++ CK L
Sbjct: 441 RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALT 500
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++ +M+ G V N T+ I+I+ L K + +A LL + + +GL
Sbjct: 501 MLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%)
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ V DA+ N+M P I+ + +L+ + Y A L L + G+ PD+ T
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ IN C + G ++A + + G +P IT+ TL++ LC ++N+ ++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+GI + +Y +I+G+ GD A L+ + + M++ I LC+ LV +
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L +M K +S + L+
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLI 241
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 162/341 (47%), Gaps = 19/341 (5%)
Query: 97 CDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK---IPKFRI------ 147
C + +VL +E + TP +F LI +++ ++++ ++YK +P +
Sbjct: 110 CSVFNVLSRLESSKF--TPN-VFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLD 166
Query: 148 -----NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
R ++ M+ G + T ++ C Q D + EM +
Sbjct: 167 GLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL--KAFRLFDEMIEKKI 224
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+V YT +IR L + ++ +A + M++ G+ P++ Y +++G KA E
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
L+ E+L GL+P+V T+ + I+GLCK + + + K + M G P++ YN L+ C
Sbjct: 285 LYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYC 344
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K L+ L E++ I+ ++ TYSI+I GL + EA GLL+E KG +
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G C+ G + KA+E+ QM +K + P + L+
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 128/251 (50%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ +C + +S E + M+ G + Y ++ K V AL + +M
Sbjct: 232 TILIRGLCGESRISEAE--SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM 289
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
DG+ P++V + ++++G+ ++ V A + ++ G+VP+++ YN I+G CK N+
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + + +E+ PDV TY+ L++ LC V + L++EMK KG + N TY+ +
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDG +G++ +A + + KG+ F I G C+ G + A+ L +M K +
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 413 SPGARVWEALL 423
P + AL+
Sbjct: 470 LPDVVAYTALI 480
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I V A+E+ M+ DG + T +++ +C+ ++ S F+ +M G
Sbjct: 275 KIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR--KFLIDMASFGVVPN 332
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I K + +AL + ++++ I PD+ Y++++ G+ + +A+ L
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G +P+ TYN I+G CK+ N+E I++ + M E G +P++IT++TL+ CK
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L EM KG++ ++ Y+ +IDG G+ EA L +E GL
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVS 413
I GLC+ G + A++L D +
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTT 540
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R+ A + M N G + T + ++ C+ + + L EM G +V
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK--KALELYXEMLGDGLLPNVV 299
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I L K +++ A L M S G+ P+I Y +++G + +A L E+
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
++PDV+TY++ I GLC + +E ++ M++ G P+ +TYNTL+ CK +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ E+ +M KGI N+ T+S +IDG G + A GL E + KGL +
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTAL 479
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I G + G ++A L K+M + + P
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHP 506
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNC 159
F++ LI Y A ++++L +I K I +R+ A +L
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M GF + T + ++ C++ ++ ++ + +M + G ++ ++ +I K
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNM--EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ A+G+ +M G+ PD+V YT +++G + +A L E+ GL P+V+T
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 280 NVYINGLCKQNNVEAGIKMIAC---MEELGSK----------PDVITYNTLLQALCKVRE 326
+ I+GLCK + IK+ + GSK P+ + Y L+Q LC
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + + +M+ G+ ++ T ++I G + + L + L G+ SS++
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631
Query: 387 TICGLCQRGLVRKALEL 403
G + G ++ AL
Sbjct: 632 LAKGYEESGYLKSALSF 648
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 4/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M+N G +D T ++++ C +D +E L +M + GF + ++
Sbjct: 496 ATEVLRTMVNKGMELDNITYNIMIQGCC--KDSKIEEALKLRDDMIRKGFKPDAYMFNSI 553
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K+ +AL +L QMK +G++PD+V Y +++G +D KA E +EL+ GL
Sbjct: 554 IHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGL 613
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ YN I G + N+ I ++ ME +G +P +TY +L+ +C ++ +
Sbjct: 614 KPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKT 673
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ ++ + I + + Y+IMI GL G + EA EE ++ + + + C
Sbjct: 674 MFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYC 733
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ G +A +L +M + P + L+ S V LD
Sbjct: 734 KSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLD 774
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 145/329 (44%), Gaps = 12/329 (3%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVG---FAIEILNCMINDG 164
K E E I +++ T H LF + + R G + +++ M+ G
Sbjct: 383 KEGEMERAERILEEMLSTGMTIHS-----GLFNSVVAGLLQRTGRLESVVRLISEMVKRG 437
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
+ + +C+ R E +G +M + G C + +I L + + +
Sbjct: 438 MKPNDALMTACTKQLCQGR--RHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKG 495
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L M + G++ D + Y +++ G +A +L D+++ G PD Y +N I+
Sbjct: 496 ATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIH 555
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
C +E + ++ M+ G +PDV++Y T++ CK +++ + E + E+ G+
Sbjct: 556 AYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKP 615
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N Y+ +I G G+I A G+L+ + G+ + + + +C GLV +A +
Sbjct: 616 NAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMF 675
Query: 405 KQMADKDVSPGARVWEALL--LSSVSKLD 431
+Q + G + ++ L + K+D
Sbjct: 676 EQSRKNSIEVGVVGYTIMIQGLCKIGKMD 704
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 155/354 (43%), Gaps = 19/354 (5%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P + +I L + +F ++ ++L +E E I +LI + F +++
Sbjct: 299 PSMVTFGILINGLKRSDRFGEVGALLREMEGL-GITPNEVICNELIDWHCRKGHFTEAIR 357
Query: 138 LF-------YKIPKFRINRVGFAI----------EILNCMINDGFCVDGKTCSLILSSVC 180
LF K N + A+ IL M++ G + + +++ +
Sbjct: 358 LFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLL 417
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
QR + ++ + EM K G T + L + + +A+GI +M G+ +
Sbjct: 418 -QRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCIN 476
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
I +++G+ ++ A E+ ++ G+ D TYN+ I G CK + +E +K+
Sbjct: 477 IATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRD 536
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M G KPD +N+++ A C + ++ L+ +MK +G+ ++ +Y +IDG
Sbjct: 537 DMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAK 596
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
DI +A L E + GL + +++ I G + G + A+ +L M + P
Sbjct: 597 DIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQP 650
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 160/382 (41%), Gaps = 29/382 (7%)
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
H+LSS S S+ C + +++ LA V D + + + +
Sbjct: 182 HVLSSRRASPSVKTC-------NALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTS 234
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI-LSSVC 180
+IK + D + + + + A+ ++ D C G+ I L
Sbjct: 235 MIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPY--NLLMDALCKSGRVDEAIRLKGRM 292
Query: 181 EQRDLS---------------SD---ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
E+ ++ SD E+ ++EM+ LG V +I +K
Sbjct: 293 EESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHF 352
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+A+ + ++M S +K V Y ++ + + + +AE + +E+L G+ +N
Sbjct: 353 TEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSV 412
Query: 283 INGLCKQNN-VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
+ GL ++ +E+ +++I+ M + G KP+ + LC+ R + +M KG
Sbjct: 413 VAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKG 472
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ +N+ T + +I GL ++ A +L +NKG+ + ++ I G C+ + +AL
Sbjct: 473 LCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEAL 532
Query: 402 ELLKQMADKDVSPGARVWEALL 423
+L M K P A ++ +++
Sbjct: 533 KLRDDMIRKGFKPDAYMFNSII 554
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 67/125 (53%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++ +K G+V YT +I+ L K K+ +A+ +M+S I P+ + YT +
Sbjct: 669 DEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTL 728
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ + +A +LFDE++ G+VPD +YN + G + ++++ I+ A + + +
Sbjct: 729 MYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMT 788
Query: 308 KPDVI 312
+ D +
Sbjct: 789 QNDCL 793
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 118/276 (42%), Gaps = 28/276 (10%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF--Y 140
Y+ +I+ ++S+ + + D + R+ F+ ++F +I Y D + +++++L
Sbjct: 515 YNIMIQGCCKDSKIEEALKLRDDM-IRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQM 573
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGK------------TCSLILSSVCEQ------ 182
KI + + V + I DG+C C L ++V
Sbjct: 574 KIEGVQPDVVSYGTII------DGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGY 627
Query: 183 -RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
R+ + +G + M+ +G V Y +++ + V +A + Q + + I+ +
Sbjct: 628 GRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGV 687
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V YT+++ G+ +A F+E+ + P+ TY + CK N E K+
Sbjct: 688 VGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDE 747
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
M G PD ++YNTL+ +V L++ E E+
Sbjct: 748 MVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEI 783
>gi|326512056|dbj|BAJ96009.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 151/335 (45%), Gaps = 27/335 (8%)
Query: 75 NCEPPPEA-YHFVIKTLAENSQFCDISSVLD-HIEKRENFET---------------PEF 117
+C P PE +H ++ TLA + + +++ + T P
Sbjct: 2 SCSPVPEPDHHRLLATLARHGRLAAAATLFSTAVRTTRALNTILAALCSSPSLLRLAPSV 61
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+ + DA F+ + R R A +L CM + D C +LS
Sbjct: 62 LLLAAPTASPDAATFRVLTSALC-----RARRPSAAAGLLRCMPSLHLDPDSPLCRAVLS 116
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ-MKSDG 236
S+C R + + F+ +M++ G +D+ V+R+L+++ V +A ++ + M SDG
Sbjct: 117 SLC--RCAPARDAAAFLDDMRRWGVPPSGLDHRAVLRALLREGMVAEAYEVVREKMDSDG 174
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P + + ++L ++ ++ FDE+L+ GLVP V YNVY+ LCK+ ++
Sbjct: 175 VPPGVADFELMLRAFSEHGEFDAVDQAFDEMLLRGLVPGVAVYNVYVAALCKKGDLAGAR 234
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+M+ CME G P+V T+ ++ + R++ E +G+ + + ++ L
Sbjct: 235 RMVECMERAGCPPNVRTFGVVVAGCVSAGDAGAARDVASEAVRRGLRWDTPSMVELVGLL 294
Query: 357 ASKGDIIEACGLLEEALNKGLCT--QSSMFDETIC 389
+ G + +A GLL + G CT +S + IC
Sbjct: 295 RAGGQVADAHGLLLDVFLHGGCTGLDASTLGQLIC 329
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 36/194 (18%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK---------- 323
PD T+ V + LC+ A ++ CM L PD +L +LC+
Sbjct: 71 PDAATFRVLTSALCRARRPSAAAGLLRCMPSLHLDPDSPLCRAVLSSLCRCAPARDAAAF 130
Query: 324 VRELNR-------------LRELVKE-------------MKWKGIVLNLQTYSIMIDGLA 357
+ ++ R LR L++E M G+ + + +M+ +
Sbjct: 131 LDDMRRWGVPPSGLDHRAVLRALLREGMVAEAYEVVREKMDSDGVPPGVADFELMLRAFS 190
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G+ +E L +GL ++++ + LC++G + A +++ M P R
Sbjct: 191 EHGEFDAVDQAFDEMLLRGLVPGVAVYNVYVAALCKKGDLAGARRMVECMERAGCPPNVR 250
Query: 418 VWEALLLSSVSKLD 431
+ ++ VS D
Sbjct: 251 TFGVVVAGCVSAGD 264
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 109 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 162
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 163 TLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 222
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 223 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 282
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +I+G +GD+ A + + + + + I G
Sbjct: 283 HHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISG 342
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
CQ G A ++L++M + P AR + ++
Sbjct: 343 XCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 375
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 153
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G + + M G +PDV TY+ L+ LCK +++
Sbjct: 154 LRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDAN 213
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 214 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A L+ +M+ K + P + L+
Sbjct: 274 CKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 305
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ + M+ G D T S++++ +C++ + D+ EM G V +T
Sbjct: 177 GFXLK--SXMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPNGVTFT 232
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A L DE+ V
Sbjct: 233 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVK 292
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY ING CK+ ++++ + M + + D + Y L+ C+
Sbjct: 293 GLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDA 352
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ GD+ LL+E G
Sbjct: 353 EKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDG 398
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E+L G +Y +N+ ++ CK ++ + + + G +P V++YNTL+
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ +L+ L M G+ ++ TYS++I+GL + + +A L +E L KGL
Sbjct: 170 RXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 229
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 279
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 212 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 269
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT ++NG + D A E ++ +
Sbjct: 270 IYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENI 329
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+G C++ KM+ M +G KPD TY ++ CK ++ +
Sbjct: 330 RLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSK 389
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 390 LLKEMQRDGHVPSVVTYNVLMNG 412
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 136/264 (51%), Gaps = 6/264 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C++ D+ +L+ + + K G +V +
Sbjct: 120 GFYKEILEC----GYPASLYFFNILMQRFCKEGDIRVAQLV--LNAITKWGLRPSVVSFN 173
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+L
Sbjct: 174 TLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK 233
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+VP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK EL +
Sbjct: 234 GMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQA 293
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM +G+ + TY+ +IDG +GD+ A + + + + ++ I G
Sbjct: 294 HDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISG 353
Query: 391 LCQRGLVRKALELLKQMADKDVSP 414
LCQ G A ++L++M + P
Sbjct: 354 LCQEGRSVDAEKMLREMLSVGLKP 377
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ + R+ R F V TC +L
Sbjct: 65 YVFSGLITAYLESGFLRDAIECY------RLTR------------EHKFWVPLDTCRKVL 106
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E+ + G+ + + +++ K+ + A +LN + G
Sbjct: 107 EHLMKLKYFKL--VWGFYKEILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWG 164
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + G+ PDVYTY+V INGLCK++ ++
Sbjct: 165 LRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 224
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 225 ELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 284
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KG++ +A L++E +GL + I G C+ G + A E K+M +++
Sbjct: 285 CKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDD 344
Query: 417 RVWEALL 423
V+ AL+
Sbjct: 345 VVYTALI 351
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 2/200 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M G D T S++++ +C++ + D+ EM G
Sbjct: 181 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDKGMVPN 238
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + + +A +L D
Sbjct: 239 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLID 298
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 299 EMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEG 358
Query: 326 ELNRLRELVKEMKWKGIVLN 345
++++EM G+ N
Sbjct: 359 RSVDAEKMLREMLSVGLKPN 378
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 182/377 (48%), Gaps = 29/377 (7%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDL 122
+ S L + P Y+ +++TL ++ + + VLD +RE + P+ I + L
Sbjct: 196 IGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECY--PDVITYTIL 253
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
I+ + + VG A+++L+ M + G D T +++++ +C++
Sbjct: 254 IEATC------------------KESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKE 295
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
L DE + F+ M G ++ + ++RS+ + DA L +M G P +V
Sbjct: 296 GRL--DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+ +++N + + +A ++ +++ G P+ +YN ++ LCK +E I+ + M
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G PD++TYNTLL ALCK +++ E++ ++ KG L TY+ +IDGL+ G
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT 473
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+A LL+E KGL + + GL + G V +A+ + + V P A + ++
Sbjct: 474 DDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSI 533
Query: 423 LLS------SVSKLDFV 433
+L +V +DF+
Sbjct: 534 MLGLCKARQTVRAIDFL 550
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 159/332 (47%), Gaps = 18/332 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEK---RENFETPEFIFIDLI 123
LL C+P Y+ +I + + + + L+H+ + N T I +
Sbjct: 269 LLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMC 328
Query: 124 KT--YADAHRF---------QDSVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDGK 170
T + DA +F SV F + F R +G AI++L M G +
Sbjct: 329 STGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSL 388
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+ + +L ++C+ + + + + ++ M G +V Y ++ +L K KV A+ ILN
Sbjct: 389 SYNPLLHALCKDKKM--ERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 446
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
Q+ S G P ++ Y V++G+ A +L DE+ GL PD+ TY+ + GL ++
Sbjct: 447 QLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREG 506
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
V+ I +EE+G KP+ ITYN+++ LCK R+ R + + M +G +Y
Sbjct: 507 KVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYM 566
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
I+I+GLA +G EA LL E ++G+ +SS
Sbjct: 567 ILIEGLAYEGLAKEALELLNELCSRGVVKKSS 598
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 138/273 (50%), Gaps = 5/273 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + + G D T ++++S C+ ++ S +Q + ++ +V Y +
Sbjct: 164 ATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSA-----LQLLDRMSVSPDVVTYNTI 218
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+R+L K+ +A+ +L++ PD++ YT+++ + +A +L DE+ G
Sbjct: 219 LRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGC 278
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TYNV ING+CK+ ++ I+ + M G +P+VIT+N +L+++C +
Sbjct: 279 KPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 338
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM KG ++ T++I+I+ L KG I A +LE+ G S ++ + LC
Sbjct: 339 FLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALC 398
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + +A+E L M + P + LL +
Sbjct: 399 KDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTA 431
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V+ N +R LV+ ++ + L M G PDI+ T ++ G+ KA + +
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L G VPDV TYNV I+G CK + + +++ ++ + PDV+TYNT+L+ LC +
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGK 227
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L E++ + ++ TY+I+I+ + + +A LL+E +KG ++
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
I G+C+ G + +A+ L M P +L S S
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCS 329
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 158/354 (44%), Gaps = 20/354 (5%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQD 134
C P Y +I+ + S +LD E R+ P+ + + LI R +
Sbjct: 243 CYPDVITYTILIEATCKESGVGQAMKLLD--EMRDKGCKPDVVTYNVLINGICKEGRLDE 300
Query: 135 SVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDG-KTCSLILSSVCEQRDLSSDELL 191
++ +P + + N + I IL M + G +D K + ++ C ++ + L+
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNI-ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILI 359
Query: 192 GFV-------------QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
F+ ++M + G + Y ++ +L K +K+ A+ L+ M S G
Sbjct: 360 NFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCY 419
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PDIV Y +L + A E+ ++L G P + TYN I+GL K + IK+
Sbjct: 420 PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKL 479
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M+ G KPD+ITY+TL+ L + +++ +++ G+ N TY+ ++ GL
Sbjct: 480 LDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCK 539
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ A L + +G + + I GL GL ++ALELL ++ + V
Sbjct: 540 ARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 147/308 (47%), Gaps = 22/308 (7%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++ +LI ++R Q+S L ++ + I F T + I
Sbjct: 360 LLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSF------------------TNNCIF 401
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+C + D+S L +++M+ G + T++++ L K K +A L M +G
Sbjct: 402 GCLCRRHDISG--ALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEG 459
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+PDIV Y+ L+G+I ++ +A +LF ++ G PDV YN+ I GLCK +
Sbjct: 460 FQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQ 519
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ MEE G P +TYNTL+ LCK L + M K N+ TYS +I+GL
Sbjct: 520 NLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGL 579
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+ G +A L E KG CT SS+ + I GL G +AL L++M ++++ P
Sbjct: 580 CNAGRPDDALVLWNEMGRKG-CTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPD 638
Query: 416 ARVWEALL 423
V+ LL
Sbjct: 639 TYVYVGLL 646
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 125/256 (48%), Gaps = 2/256 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ T S++++ + + DL D +G ++M ++G ++ Y N+I L ++ ++ G
Sbjct: 323 NSTTFSIVINGLIKTGDL--DLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCG 380
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +M+ GI+P + + + D A L ++ + G VP + + LC
Sbjct: 381 LLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELC 440
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K K + M E G +PD++ Y+ L L K++E+++ +L +++ +G ++
Sbjct: 441 KHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVI 500
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y+I+I GL I EA LL E KGL + ++ I GLC+ + +A+ L M
Sbjct: 501 AYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMM 560
Query: 408 ADKDVSPGARVWEALL 423
+K+ P + L+
Sbjct: 561 IEKEREPNVITYSTLI 576
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 171/419 (40%), Gaps = 87/419 (20%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRE--NFETPEFIFIDLIKTYADAHRFQDSVNL 138
+ Y F I LA S++ + + IE E N + F LI + R +++L
Sbjct: 134 DEYVFSILVLA-FSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHL 192
Query: 139 FYKIPKFRINRVGFAIEI-LNCMINDGFCV---------------------DGKTCSLIL 176
F K+ K GF +I L +I G CV D K + ++
Sbjct: 193 FDKMKK-----SGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLI 247
Query: 177 SSVCEQRDLSSDELLGFVQEMKK-LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK-- 233
SS ++ +EL F +EM + + + Y +V+ SLV V A +L +
Sbjct: 248 SSFSKE-----EELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIG 302
Query: 234 ---SDG-----------IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
DG + P+ +++V+NG+I D A LF ++ +G PD+ Y
Sbjct: 303 NCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLY 362
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK- 338
N I+GLC N ++ ++ MEE G +P T N + LC+ +++ L+K+M+
Sbjct: 363 NNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRI 422
Query: 339 -----W-----------------------------KGIVLNLQTYSIMIDGLASKGDIIE 364
W +G ++ YS +DGL ++ +
Sbjct: 423 HGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQ 482
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A L ++ +G C ++ I GLC+ + +A LL +M +K + P A + L+
Sbjct: 483 ALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLI 541
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M +GF D S L + + +++ D+ L Q++ G+C ++ Y +I+ L K
Sbjct: 455 MAEEGFQPDIVAYSACLDGLIKIQEV--DQALKLFQDICAQGYCPDVIAYNILIKGLCKT 512
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG-LVPDVYT 278
+++ +A +L++M+ G+ P V Y +++G + + D+++ LF +++ P+V T
Sbjct: 513 QRIAEAQNLLHEMEEKGLVPSAVTYNTLIDG-LCKTDHLEEAMLFLSMMIEKEREPNVIT 571
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y+ INGLC + + + M G P I Y + L N ++EM+
Sbjct: 572 YSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREME 631
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+ + + Y +++ + A +L+E ++KG
Sbjct: 632 EREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKG 669
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 127/304 (41%), Gaps = 52/304 (17%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M + G+ D T + +L C + D+ L E+ G+ V ++ ++ + K
Sbjct: 92 MHDHGWGFDKYTLTPVLQVYCNMAEF--DKALDVFNEIHDRGWVDEYV-FSILVLAFSKW 148
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
KV A ++ M+ ++ + + ++ G + + KA LFD++ G PD+ Y
Sbjct: 149 GKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLY 208
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDV---------------------------- 311
+V I GLC +V+ + + + M+ +PDV
Sbjct: 209 DVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMD 268
Query: 312 -----ITYNTLLQALCKVRELNRLRELVKEMK-------------WKGIVL---NLQTYS 350
+ YN++L +L +++ L++ + ++G + N T+S
Sbjct: 269 PKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFS 328
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+I+GL GD+ A GL + G +++ I GLC ++++ LL++M +
Sbjct: 329 IVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEES 388
Query: 411 DVSP 414
+ P
Sbjct: 389 GIEP 392
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 2/196 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I V A+++ + G+C D ++++ +C+ + ++ E + EM++ G
Sbjct: 476 KIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIA--EAQNLLHEMEEKGLVPS 533
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I L K + + +A+ L+ M +P+++ Y+ ++NG+ A L++
Sbjct: 534 AVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWN 593
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G P Y +I+GL + + MEE KPD Y LL A
Sbjct: 594 EMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDS 653
Query: 326 ELNRLRELVKEMKWKG 341
E+++EM KG
Sbjct: 654 NQPLAFEILQEMVDKG 669
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 36/207 (17%)
Query: 258 VKAEELFDELLVLGL-VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
V+A LFD++ +GL VP+ Y+Y + L K ++ + M + G D T
Sbjct: 47 VEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTP 106
Query: 317 LLQALCKVRELNRLR----------------------------------ELVKEMKWKGI 342
+LQ C + E ++ EL++ M+ K +
Sbjct: 107 VLQVYCNMAEFDKALDVFNEIHDRGWVDEYVFSILVLAFSKWGKVDKACELIETMEEKNV 166
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
LN +T+ +I G + + +A L ++ G S++D I GLC V+KAL
Sbjct: 167 RLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALC 226
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSK 429
L +M + P ++ L+SS SK
Sbjct: 227 LYSEMKGFKIQPDVKIVTK-LISSFSK 252
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S +++ +C D+ L EM + G + Y I L + +AL L
Sbjct: 571 TYSTLINGLCNAG--RPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLR 628
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
+M+ +KPD Y +LN +V + A E+ E++ G PD++ N
Sbjct: 629 EMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKN 678
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 139/274 (50%), Gaps = 2/274 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+ A +LN M D + I+ S+C+ R + D+ L +EM+ G +V Y
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV--DDALNLFKEMETKGIRPNVVTY 223
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+++I L + DA +L+ M I P++V + +++ + + +V+AE+L D+++
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD++TYN ING C + ++ +M M PD+ TYNTL++ CK + +
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL +EM +G+V + TY+ +I GL GD A + ++ ++ G+ + +
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC G + KALE+ M ++ ++ ++
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++++ C + +S L + +M KLG+ +V ++++ +++ DA+ +++
Sbjct: 47 TYNILINCFCRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 104
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G +PD + +T +++G+ + +A L D ++ G P++ TY V +NGLCK+
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+++ ++ ME + DV+ +NT++ +LCK R ++ L KEM+ KGI N+ TYS
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I L S G +A LL + + K + F+ I + G +A +L M +
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 411 DVSPGARVWEALL 423
+ P + +L+
Sbjct: 285 SIDPDIFTYNSLI 297
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ T S +L+ C + +S + + V +M ++G+
Sbjct: 57 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS--DAVALVDQMVEMGYRPD 114
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I L K +A+ ++++M G +P++V Y +V+NG+ + D A L +
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV +N I+ LCK +V+ + + ME G +P+V+TY++L+ LC
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +L+ +M K I NL T++ +ID +G +EA L ++ + + + ++
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + KA ++ + M KD P + L+
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 160/359 (44%), Gaps = 29/359 (8%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE--NFETPEFIFIDLIKTYADAHRF 132
C+P Y V+ L + DI + + K E E IF +I +
Sbjct: 145 GCQPNLVTYGVVVNGLCKRG---DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 133 QDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
D++NLF ++ R N V ++ +++C+ + G D S +LS + E++
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYS-SLISCLCSYGRWSDA---SQLLSDMIEKK------- 250
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+V + +I + VK+ K +A + + M I PDI Y ++NG
Sbjct: 251 -----------INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + KA+++F+ ++ PD+ TYN I G CK VE G ++ M G D
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+TY TL+Q L + + +++ K+M G+ ++ TYSI++DGL + G + +A + +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ ++ I G+C+ G V +L ++ K V P + ++ SK
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 27/334 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D IEK+ N P + F LI + +F +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNALIDAFVKEGKFVE 273
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ L + K I+ F N +IN GFC+ R + ++ F+
Sbjct: 274 AEKLHDDMIKRSIDPDIFT---YNSLIN-GFCM-------------HDRLDKAKQMFEFM 316
Query: 195 QEMKKLGFCFGMVD-YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
CF +D Y +I+ K ++V D + +M G+ D V YT ++ G+
Sbjct: 317 VSKD----CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D A+++F +++ G+ PD+ TY++ ++GLC +E +++ M++ K D+
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y T+++ +CK +++ +L + KG+ N+ TY+ MI GL SK + EA LL++
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G S ++ I + G + EL+++M
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 127/259 (49%), Gaps = 2/259 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ + + D ++ ++M++LG + Y +I ++ ++ AL +L +M
Sbjct: 16 LLSAIAKMKKF--DLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +P IV + +LNG + A L D+++ +G PD T+ I+GL N
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 133
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ M + G +P+++TY ++ LCK +++ L+ +M+ I ++ ++ +ID
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + +A L +E KG+ + I LC G A +LL M +K ++P
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 415 GARVWEALLLSSVSKLDFV 433
+ AL+ + V + FV
Sbjct: 254 NLVTFNALIDAFVKEGKFV 272
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 211 NVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
N + S + K K FD + + +M+ GI ++ Y +++N + A L +++
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
LG P + T + +NG C + + ++ M E+G +PD IT+ TL+ L + +
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 133
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
LV M +G NL TY ++++GL +GDI A LL + + +F+ I
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ V AL L K+M K + P + +L+
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 9/214 (4%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P I + +L+ + + + L +++ LG+ ++YTYN+ IN C+++ + + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M +LG +P ++T ++LL C + ++ LV +M G + T++ +I GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
EA L++ + +G + + GLC+RG + A LL +M + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 419 WEALLLSSVSKLDFVNTSFIRLVDQILNTPCKME 452
+ ++ S+ K R VD LN +ME
Sbjct: 188 FNT-IIDSLCKY--------RHVDDALNLFKEME 212
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDG 164
LIK + + R +D LF ++ F A ++ M++DG
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D T S++L +C L ++ L M+K + YT +I + K KV D
Sbjct: 391 VPPDIMTYSILLDGLCNNGKL--EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ + G+KP++V Y +++G+ + +A L ++ G +PD TYN I
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Query: 285 GLCKQNNVEAGIKMIACMEE 304
+ + A ++I M
Sbjct: 509 AHLRDGDKAASAELIREMRS 528
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 65/142 (45%)
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P ++ +N ++ + K + I + M+ LG ++ TYN L+ C+ +++
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ +M G ++ T S +++G I +A L+++ + G + F I GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 393 QRGLVRKALELLKQMADKDVSP 414
+A+ L+ +M + P
Sbjct: 127 LHNKASEAVALVDRMVQRGCQP 148
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 159/346 (45%), Gaps = 25/346 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHI--EKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
++ +I A F + VLD + EKR FE FI + K Y AH + +V+LF
Sbjct: 92 TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEK---CFIVIFKAYGKAHLPEKAVDLF 148
Query: 140 YKIP-KFRINRVGFAI-EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
++ +F R G + +LN +I +G R L E V
Sbjct: 149 DRMACEFECKRTGKSFNSVLNVIIQEGLF---------------HRAL---EFYNHVIGA 190
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K + ++ + VI+++ K V DA+ + M +PD+ Y +++G+ +
Sbjct: 191 KGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRI 250
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A L DE+ + G P T+NV INGLCK+ ++ K++ M G P+ +TYNTL
Sbjct: 251 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTL 310
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LC +L + L+ M V N+ TY +I+GL +G ++ +L +G
Sbjct: 311 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGY 370
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C ++ I GL + G ++A+ L K+M K V+ A++
Sbjct: 371 CVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVI 416
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 133/275 (48%), Gaps = 22/275 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C P Y +I L + + D + VL +E+R + E+++ LI
Sbjct: 325 SLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEER-GYCVNEYVYSTLISG 383
Query: 126 YADAHRFQDSVNLFYK--IPKFRINRVGF---------------AIEILNCMINDGFCVD 168
+ Q++++LF + + + +N + + A+E+L+ M N G +
Sbjct: 384 LFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPN 443
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
TCS ++ E + S + ++M K F V Y+ +I L K KV +A+ +
Sbjct: 444 AYTCSSLMKGFFEAGN--SHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMV 501
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG--LVPDVYTYNVYINGL 286
QM G KPD+V Y+ ++NG+ + A +L++E+L G PDV TYN+ +N L
Sbjct: 502 WTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTL 561
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
CKQ+++ I ++ M + G PD++T L+ L
Sbjct: 562 CKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML 596
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 150/345 (43%), Gaps = 45/345 (13%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +R+ A+ +L+ M DG T +++++ +C++ DLS L V M G
Sbjct: 246 KADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKL--VDNMFLKGCIPN 303
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ----------- 254
V Y +I L K K+ A+ +L++M S P++V Y ++NG++ Q
Sbjct: 304 EVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLA 363
Query: 255 ---------EDYV---------------KAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+YV +A LF E+ V G + Y+ I+GLC+
Sbjct: 364 LMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDG 423
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ +++++ M G P+ T ++L++ + +R E+ K+M N YS
Sbjct: 424 KPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYS 483
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM--A 408
++I GL G + EA + + L KG + I GL GLV A++L +M
Sbjct: 484 VLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQ 543
Query: 409 DKDVSPGARVWEALL-----LSSVSK-LDFVNTSFIRLVDQILNT 447
D P + LL SS+S+ +D +N+ R D L T
Sbjct: 544 GPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVT 588
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 157/370 (42%), Gaps = 27/370 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL I C P P ++ +I L + + ++D++ + E + LI
Sbjct: 255 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPN-EVTYNTLIHG 313
Query: 126 YADAHRFQDSVNLFYKI--PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+ + +++L ++ K N V + I+N ++ G +DG C L L
Sbjct: 314 LCLKGKLEKAISLLDRMVSSKCVPNVVTYGT-IINGLVKQGRALDG-ACVLAL------- 364
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
M++ G+C Y+ +I L K+ K +A+ + +M G + + +
Sbjct: 365 -------------MEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIV 411
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ V++G+ A E+ E+ G P+ YT + + G + N +++ M
Sbjct: 412 YSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMA 471
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ + + Y+ L+ LCK ++ + +M KG ++ YS MI+GL+ G +
Sbjct: 472 KHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVE 531
Query: 364 EACGLLEEALNKGLCTQSSMFDETIC--GLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+A L E L +G +Q + I LC++ + +A++LL M D+ P
Sbjct: 532 DAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTI 591
Query: 422 LLLSSVSKLD 431
L KLD
Sbjct: 592 FLRMLREKLD 601
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 16/261 (6%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
+GFC +G+ +E L FV E+ + GF V + +++ + V
Sbjct: 236 NGFCKEGRV----------------EEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNV 279
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DAL I++ M G PD+ Y +++G+ ++ KA E+ ++++ P+ TYN
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+ LCK+N +EA + + G PDV T+NTL+Q LC + + E+ +EMK KG
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGC 399
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ TYSI+ID L + + EA LL+E + G + +++ I GLC+ + A E
Sbjct: 400 KPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEE 459
Query: 403 LLKQMADKDVSPGARVWEALL 423
+ QM VS + + L+
Sbjct: 460 IFDQMELLGVSRSSVTYNTLI 480
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 143/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI V A++I++ MI GF D T + ++S +C+ + ++ + +Q+M
Sbjct: 275 RIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEF--EKAIEILQQMILRECSPN 332
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I +L K+ ++ A + + S G+ PD+ + ++ G+ + ++ A E+F+
Sbjct: 333 TVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFE 392
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PD +TY++ I+ LC + ++ + ++ ME G + + YNTL+ LCK R
Sbjct: 393 EMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSR 452
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ E+ +M+ G+ + TY+ +IDGL + EA L+++ + +GL ++
Sbjct: 453 RIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYN 512
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ C+ G + KA ++++ MA P + L+
Sbjct: 513 SLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLI 550
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 133/269 (49%), Gaps = 2/269 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + A ++ +++ G D T + ++ +C ++ D + +EMK G
Sbjct: 347 NEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN--QDIAMEMFEEMKNKGCKPDEF 404
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +I SL + ++ +AL +L +M+S G + V Y +++G+ AEE+FD++
Sbjct: 405 TYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQM 464
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+LG+ TYN I+GLCK VE +++ M G KPD TYN+LL C+V ++
Sbjct: 465 ELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDI 524
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++V+ M G ++ TY +I GL G + A LL KG+ ++
Sbjct: 525 EKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPV 584
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGA 416
I L R ++ + L ++M +K P A
Sbjct: 585 IQALFMRKRTKEGMRLFREMMEKSDPPDA 613
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A+ + + +GF D T + +++ C R + ++ L V M + GF +
Sbjct: 243 RVEEALRFVLEVSEEGFSPDQVTFNSLVNGFC--RIGNVNDALDIVDFMIEKGFDPDVYT 300
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++I + K + A+ IL QM P+ V Y +++ + + + A +L L+
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV 360
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL+PDV T+N I GLC N + ++M M+ G KPD TY+ L+ +LC R L
Sbjct: 361 SKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLK 420
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L+KEM+ G N Y+ +IDGL I +A + ++ G+ S ++ I
Sbjct: 421 EALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLI 480
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ V +A +L+ QM + + P + +LL
Sbjct: 481 DGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 4/239 (1%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCY 244
S D + ++++K G + +I+S ++ + L IL N++ G KPD Y
Sbjct: 70 SFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENEL---GFKPDTNFY 126
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+ LN ++ E L +++ G+V DV T+NV I LCK + + I M+ M
Sbjct: 127 NIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMAN 186
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G KPD IT+ TL+Q + +LN ++ K+M G +L + ++++G +G + E
Sbjct: 187 HGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEE 246
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A + E +G F+ + G C+ G V AL+++ M +K P + +L+
Sbjct: 247 ALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLI 305
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A+ +L M + G + + ++ +C+ R + E + +M+ LG V
Sbjct: 418 RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEI--FDQMELLGVSRSSVT 475
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K ++V +A +++QM +G+KPD Y +L D KA ++ +
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA 535
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD++TY I GLC+ V+ K++ ++ G YN ++QAL +
Sbjct: 536 SNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTK 595
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII-EACGLLEEALNKGLCTQSSMFDET 387
L +EM K + T+ I+ GL + G I EA E L KG+ + F
Sbjct: 596 EGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFL 655
Query: 388 ICGLCQRGLVRKALELLKQMADK 410
GLC + +EL+ + +K
Sbjct: 656 AEGLCSLSMEDTLIELINMVMEK 678
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 11/225 (4%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A ++++ MI +G D T + +L+ C D+ ++ VQ M G +
Sbjct: 488 RVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDI--EKAGDIVQTMASNGCEPDIFT 545
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L + +V A +L ++ GI Y V+ + +++ + LF E++
Sbjct: 546 YGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMM 605
Query: 269 VLGLVPDVYTYNVYINGLCKQNN-VEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PD T+ + GLC ++ I M E G P+ ++ L + LC +
Sbjct: 606 EKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSME 665
Query: 328 NRLRELVKEMKWKGIVLNLQTYSI--------MIDGLASKGDIIE 364
+ L EL+ + K + +T I D LA+ G I++
Sbjct: 666 DTLIELINMVMEKAQMSERETSMIRGFLKIRKFNDALANLGGILD 710
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ D T S +L+ C + +S + + V +M ++G+
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS--DAVALVDQMVEMGYKPD 187
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+T +I L K +A+ +++QM G +PD+V Y V+NG+ + D A L +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + +V +N I+ LCK +VE + + ME G +P+V+TYN+L+ LC
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ M K I N+ T++ +ID +G ++EA L EE + + + + ++
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A ++ K M KD P + + L+
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 154/314 (49%), Gaps = 19/314 (6%)
Query: 127 ADAHRFQDSVNLFYKIPKFR-----------------INRVGFAIEILNCMINDGFCVDG 169
+D + D+V+LF + K R +N+ I + M G D
Sbjct: 59 SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T S+ ++ C + LS L + +M KLG+ +V ++++ +++ DA+ ++
Sbjct: 119 YTYSIFINCFCRRSQLSL--ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+QM G KPD +T +++G+ + +A L D+++ G PD+ TY +NGLCK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+++ + ++ ME K +V+ +NT++ +LCK R + +L EM+ KGI N+ TY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ +I+ L + G +A LL L K + F+ I + G + +A +L ++M
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 410 KDVSPGARVWEALL 423
+ + P + L+
Sbjct: 357 RSIDPDTITYNLLI 370
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I+ S+C+ R + + + EM+ G +V Y ++I L + DA +L+ M
Sbjct: 264 IIDSLCKYRHV--EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
I P++V + +++ + V+AE+L +E++ + PD TYN+ ING C N ++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+M M P++ TYNTL+ CK + + EL +EM +G+V N TY+ +I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G GD A + ++ ++ + T + + GLC G + AL + K + ++
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 415 GARVWEALL 423
++ ++
Sbjct: 502 NIFIYNTMI 510
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 173/392 (44%), Gaps = 61/392 (15%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE--NFETPEFIFIDLIKTYADAHRFQ 133
C+P Y V+ L + DI L+ + K E + IF +I + +
Sbjct: 219 CQPDLVTYGTVVNGLCKRG---DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 134 DSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
+V+LF ++ R N V + ++NC+ N G D S +LS++ E++ +
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYN-SLINCLCNYGRWSDA---SRLLSNMLEKKINPN---- 327
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+V + +I + K+ K+ +A + +M I PD + Y +++NG
Sbjct: 328 --------------VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ +A+++F ++ +P++ TYN ING CK VE G+++ M + G +
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL-- 369
+TY T++Q + + + + + K+M + ++ TYSI++ GL S G + A +
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 370 ----EEALN--------KGLCTQSSM------------------FDETICGLCQRGLVRK 399
E LN +G+C + ++ I GLC + L+++
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQE 553
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
A +L ++M + P + + L+ +++ D
Sbjct: 554 ADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 208 DYTNVIRS-LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
DY ++R+ L KV DA+ + M P IV + +L+ V + L ++
Sbjct: 49 DYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQ 108
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ LG+ D+YTY+++IN C+++ + + ++A M +LG +PD++T ++LL C +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ LV +M G + T++ +I GL EA L+++ + +G +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ GLC+RG + AL LL +M + ++ ++ S
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 5/235 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A ++ M++ + +T + +++ C+ + + ++ + +EM + G V
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV--EDGVELFREMSQRGLVGNTV 434
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I+ + A + QM S+ + DI+ Y+++L+G+ A +F L
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ +++ YN I G+CK V + L KPDV+TYNT++ LC R L
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLL 551
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+L ++MK G + N TY+ +I D + L++E + G +S
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAS 606
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K ++V D + + +M G+ + V YT ++ G D A+ +F +++
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ D+ TY++ ++GLC ++ + + +++ + ++ YNT+++ +CK ++
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L + K V+ TY+ MI GL SK + EA L + G S ++ I
Sbjct: 521 EAWDLFCSLSIKPDVV---TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 389 CGLCQRGLVRKALELLKQM 407
+ + EL+K+M
Sbjct: 578 RANLRDCDRAASAELIKEM 596
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 179/389 (46%), Gaps = 23/389 (5%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQ----FCDISSVLDHIEK 108
++ + K P + S+++H + + +NS+ C + +VL +E
Sbjct: 62 RRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSRLES 121
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYK---IPKFRI-----------NRVGFAI 154
+ TP +F LI +++ ++++ ++YK +P + R
Sbjct: 122 SKF--TPN-VFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMW 178
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++ M+ G + T ++ C Q D + EM + +V YT +IR
Sbjct: 179 KVYGDMVARGASPNVVTYGTLIDGCCRQGDFL--KAFRLFDEMIEKKIFPTVVIYTILIR 236
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L + ++ +A + M++ G+ P++ Y +++G KA EL+ E+L GL+P
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP 296
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+V T+ + I+GLCK + + + K + M G P++ YN L+ CK L+ L
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
E++ I+ ++ TYSI+I GL + EA GLL+E KG + ++ I G C+
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G + KA+E+ QM +K + P + L+
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLI 445
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 128/251 (50%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ +C + +S E + M+ G + Y ++ K V AL + +M
Sbjct: 232 TILIRGLCGESRISEAE--SMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
DG+ P++V + ++++G+ ++ V A + ++ G+VP+++ YN I+G CK N+
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + + +E+ PDV TY+ L++ LC V + L++EMK KG + N TY+ +
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDG +G++ +A + + KG+ F I G C+ G + A+ L +M K +
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 413 SPGARVWEALL 423
P + AL+
Sbjct: 470 LPDVVAYTALI 480
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I V A+E+ M+ DG + T +++ +C+ ++ S F+ +M G
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR--KFLIDMASFGVVPN 332
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I K + +AL + ++++ I PD+ Y++++ G+ + +A+ L
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G +P+ TYN I+G CK+ N+E I++ + M E G +P++IT++TL+ CK
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L EM KG++ ++ Y+ +IDG G+ EA L +E GL
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVS 413
I GLC+ G + A++L D +
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTT 540
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R+ A + M N G + T + ++ C+ + + L QEM G +V
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK--KALELYQEMLGDGLLPNVV 299
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I L K +++ A L M S G+ P+I Y +++G + +A L E+
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
++PDV+TY++ I GLC + +E ++ M++ G P+ +TYNTL+ CK +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ E+ +M KGI N+ T+S +IDG G + A GL E + KGL +
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTAL 479
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G ++A L K+M + + P L+
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 32/316 (10%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNC 159
F++ LI Y A ++++L +I K I +R+ A +L
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M GF + T + ++ C++ ++ ++ + +M + G ++ ++ +I K
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNM--EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ A+G+ +M G+ PD+V YT +++G + +A L E+ GL P+V+T
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 280 NVYINGLCKQNNVEAGIKMIAC---MEELGSK----------PDVITYNTLLQALCKVRE 326
+ I+GLCK + IK+ + GSK P+ + Y L+Q LC
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + + +M+ G+ ++ T ++I G + + L + L G+ SS++
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631
Query: 387 TICGLCQRGLVRKALE 402
G + G ++ AL
Sbjct: 632 LAKGYEESGYLKSALR 647
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 172/378 (45%), Gaps = 30/378 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P +AY +++ LA+ + SS+ D + R +F +LI A + +D+
Sbjct: 113 PSMQAYSSLVRALAKARRVDHASSLFDEM-IRGGHHPDRLMFYELILGLCQAGKVKDASE 171
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGK--------------TCS-------LIL 176
F ++PK + + N +++ G C G+ +CS +L
Sbjct: 172 RFKQMPKHGCQP---NVPVYNVLLH-GLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+VC+ R + +E + M+ G+ ++ ++ +I L + ++ AL + M G
Sbjct: 228 DAVCKARRV--EEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG 285
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
KP+ YT +++G+ E ++A ELF+++ + PD YN I G CK+ +++
Sbjct: 286 CKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 345
Query: 297 KMIACMEE-LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
K+ M G +P ++T+NTL+ CK+ +L R ELV EM KG+ + TY I+I G
Sbjct: 346 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAG 405
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L+ + EA + ++ K + GLC+ G + +A + + P
Sbjct: 406 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 465
Query: 416 ARVWEALLLSSVSKLDFV 433
+ +L S+ KL V
Sbjct: 466 PETFR-ILSESLIKLGRV 482
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 6/280 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R N + A E+ M+ G+ D + +++ + + L DE L + EM G
Sbjct: 57 RSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKL--DESLKILSEMVMRGQTPS 114
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD-IVCYTMVLNGVIVQEDYVK-AEEL 263
M Y++++R+L K +V A + ++M G PD ++ Y ++L + Q VK A E
Sbjct: 115 MQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILG--LCQAGKVKDASER 172
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F ++ G P+V YNV ++GLC +E + A M+ PDV+TYNTLL A+CK
Sbjct: 173 FKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCK 232
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
R + +L + M+ G V N+ T+S +I GL G++ +A + L G
Sbjct: 233 ARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 292
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ V +A EL ++M + P A + +L+
Sbjct: 293 YTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 332
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 155/333 (46%), Gaps = 9/333 (2%)
Query: 79 PPEAYHFVIKTLAE--NSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P E+Y + + +A N + V+ + N E ++ ++++ D+V
Sbjct: 26 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKP----DNV 81
Query: 137 NLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+ I +I ++ +++IL+ M+ G + S ++ ++ + R + D
Sbjct: 82 SYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV--DHASSLFD 139
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM + G + + +I L + KV DA QM G +P++ Y ++L+G+
Sbjct: 140 EMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSG 199
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+A LF E+ PDV TYN ++ +CK VE G K+ M G P+VIT++
Sbjct: 200 QLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFS 259
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ LC+ EL + E+ M G N TY+ +I GL +I+A L E+
Sbjct: 260 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQA 319
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
+ + ++ I G C+RG + +A +L ++M+
Sbjct: 320 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 352
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 2/211 (0%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M+ I ++ Y+ ++ ++ + ++ ++ +E++ G PDV+ +N + G + NN
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+E ++ M E G KPD ++Y+ L+ L K+ +L+ +++ EM +G ++Q YS
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
++ LA + A L +E + G MF E I GLCQ G V+ A E KQM
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 412 VSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
P V+ LL L S +L+ NT F +
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEM 211
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 169/375 (45%), Gaps = 25/375 (6%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY + V++ L + D +VLD + +R P + +++ F+
Sbjct: 119 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHV-ILEAACRGGGFRS-- 175
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
A+ +L + G +D C+L+L+++C+Q S DE L +++
Sbjct: 176 ----------------AVRVLEDLHARGCALDVGNCNLVLNAICDQG--SVDEALHLLRD 217
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G +V Y V++ L ++ ++ +M P+IV + +++ +
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 277
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ + E+ +++ G PD+ Y I+G+CK+ ++E +++ M G KP+V+ YNT
Sbjct: 278 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 337
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL+ LC EL+ EM K L+ T++I++D G + LLE+ L +G
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG 397
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ I G C+ GL+ +A+ LLK M P + +L S +V+
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457
Query: 437 FIRLVDQILNTPCKM 451
L+ Q++ C +
Sbjct: 458 --DLMSQMIQQGCPL 470
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 165/367 (44%), Gaps = 22/367 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE-NFETPEFIFIDLIK 124
++L C P P YH +++ F VL+ + R + + +
Sbjct: 143 AVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLV--LN 200
Query: 125 TYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCV 167
D ++++L +P F R G E++ M+
Sbjct: 201 AICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPP 260
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ T + ++S +C R+ + + + +M + G + Y +I + K+ + A
Sbjct: 261 NIVTFNTLISYLC--RNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 318
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
ILN+M S G+KP++VCY +L G+ E + + EEL E+ D T+N+ ++ C
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ V+ I+++ M E G PDVITY T++ CK ++ L+K M G N
Sbjct: 379 QNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 438
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+Y+I++ GL S ++A L+ + + +G F+ I LC++GLV +A+ELLKQM
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498
Query: 408 ADKDVSP 414
SP
Sbjct: 499 LVNGCSP 505
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 6/263 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ +++M + G ++ YT VI K+ + +A+ +L M + G KP+ + YT+V
Sbjct: 384 DRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L G+ E +V AE+L +++ G + T+N IN LCK+ VE I+++ M G
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD+I+Y+T++ L K + + EL+ M KG+ N YS + L+ +G I +
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ + + + + + +++ I LC+RG +A+E L M P + L+
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 623
Query: 428 SKLDFVNTSFIRLVDQILNTPCK 450
S+ F++ ++L C
Sbjct: 624 SE------GFVKEAQEMLTELCS 640
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 177/383 (46%), Gaps = 27/383 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + CEP +Y+ V+K L ++ + +++ + + P + + + +Y
Sbjct: 214 LLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMAC--PPNIVTFNTLISY 271
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ + V+ E+L M+ G D + + I+ +C++ L
Sbjct: 272 LCRNGLFERVH-----------------EVLAQMVEHGCTPDIRMYATIIDGICKEGHLE 314
Query: 187 -SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ E+L M G +V Y +++ L E+ + +L +M D V +
Sbjct: 315 VAHEIL---NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 371
Query: 246 MVLNGVIVQEDYV-KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++++ Q V + EL +++L G +PDV TY ING CK+ ++ + ++ M
Sbjct: 372 ILVD-FFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G KP+ I+Y +L+ LC +L+ +M +G LN T++ +I+ L KG + +
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A LL++ L G + I GL + G +ALELL M +K +SP ++ + +
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS-IA 549
Query: 425 SSVSKLDFVNTSFIRLVDQILNT 447
S++S+ +N I++ D I +T
Sbjct: 550 SALSREGRIN-KVIQMFDNIQDT 571
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 117/225 (52%), Gaps = 4/225 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+ +L M G + + +++L +C +R + +++L+ +M + G + +
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM---SQMIQQGCPLNPITFNT 477
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L KK V A+ +L QM +G PD++ Y+ V++G+ +A EL + ++ G
Sbjct: 478 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 537
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ Y+ + L ++ + I+M +++ + D + YN ++ +LCK E R
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 597
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
E + M G V N TY+I+I GLAS+G + EA +L E +KG
Sbjct: 598 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 35/222 (15%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI------------- 283
+ P+ Y V+ + + A + DE+ G P Y+V +
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177
Query: 284 ----------------------NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
N +C Q +V+ + ++ + G +PDV++YN +L+ L
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C + ++EL++EM N+ T++ +I L G +L + + G
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 297
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
M+ I G+C+ G + A E+L +M + P + LL
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLL 339
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 106/275 (38%), Gaps = 56/275 (20%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S + C+P +Y V+K L ++ D ++ + ++ P
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNP----------- 472
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
F +N K V AIE+L M+ +G
Sbjct: 473 ---ITFNTLINFLCK-----KGLVEQAIELLKQMLVNG---------------------C 503
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S +L+ + + VI L K K +AL +LN M + G+ P+ + Y+
Sbjct: 504 SPDLISY----------------STVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ + + + K ++FD + + D YN I+ LCK+ E I+ +A M G
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
P+ TY L++ L + +E++ E+ KG
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN + G C+ +E+ ++ A + P+ TY +++ALC + ++ EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+G Y ++++ G A +LE+ +G + + +C +G V
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+AL LL+ + P + A+L
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVL 234
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 135/260 (51%), Gaps = 2/260 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF +D + ++ +C+ + + L +Q + V Y VI + K + V
Sbjct: 37 GFHLDQVSYGTLIHGLCKVGETRA--ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVN 94
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA + ++M S GI P++V Y+ +++G V A +LF+++++ + PD YT+N+ +
Sbjct: 95 DAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILV 154
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G CK ++ G + A M + G PDV+TYN+L+ V+E+N + + M G+
Sbjct: 155 DGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVN 214
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++++Y+I+I+G + +A L E K + ++ I GL + G + AL+L
Sbjct: 215 PDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQL 274
Query: 404 LKQMADKDVSPGARVWEALL 423
+ QM D+ V P + +++
Sbjct: 275 VDQMHDRGVPPNILTYNSII 294
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 125/227 (55%), Gaps = 2/227 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + ++ AI++ N +I + DG T ++++ C+ R + + + F MK+ G
Sbjct: 123 FVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTV-FAMMMKQ-GIIP 180
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y +++ ++V A I N M G+ PDI Y +++NG + KA LF
Sbjct: 181 DVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 240
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+E+ ++P+V TYN I+GL K + ++++ M + G P+++TYN+++ AL K
Sbjct: 241 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 300
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
++++ L+ + K +GI ++ TY+I+IDGL G + +A + E+
Sbjct: 301 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFED 347
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 9/264 (3%)
Query: 167 VDGKTCSL-------ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
VDGK L ++ +C +D ++ EM G +V Y+ +I
Sbjct: 68 VDGKLVQLNAVMYNTVIYGMC--KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVV 125
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ DA+ + N++ + IKPD + ++++G + + +F ++ G++PDV TY
Sbjct: 126 GKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTY 185
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N ++G V + M + G PD+ +YN L+ CK++++++ L EM
Sbjct: 186 NSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHC 245
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
K I+ N+ TY+ +IDGL+ G I A L+++ ++G+ ++ I L + V K
Sbjct: 246 KNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDK 305
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A+ L+ + D+ + P + L+
Sbjct: 306 AIALITKFKDQGIQPSMYTYTILI 329
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 113/216 (52%), Gaps = 9/216 (4%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++ +K G+ F ++ + K K+ + + M GI PD+V Y +++G +
Sbjct: 140 LENIKPDGYTFNIL-----VDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRL 194
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
++ A+ +F+ + G+ PD+ +YN+ ING CK V+ + + M P+V+T
Sbjct: 195 VKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVT 254
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN+L+ L K ++ +LV +M +G+ N+ TY+ +ID L + +A L+ +
Sbjct: 255 YNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFK 314
Query: 374 NKGLCTQSSMFDETIC--GLCQRGLVRKALELLKQM 407
++G+ Q SM+ TI GLC+ G ++ A + + +
Sbjct: 315 DQGI--QPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 89/188 (47%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G P+ + ++ G+ ++ +A D+L+ LG D +Y I+GLCK A
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ ++ ++ + + + YNT++ +CK + +N +L EM KGI N+ TYS +I G
Sbjct: 62 LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G + +A L + + + + F+ + G C+ +++ + M + + P
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181
Query: 416 ARVWEALL 423
+ +L+
Sbjct: 182 VVTYNSLV 189
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%)
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+G P+ T N I GLC + + + LG D ++Y TL+ LCKV E
Sbjct: 1 MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+L++ + K + LN Y+ +I G+ + +A L E ++KG+ + I
Sbjct: 61 ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G G ++ A++L ++ +++ P + L+
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILV 154
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 161/340 (47%), Gaps = 33/340 (9%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGF 165
KR+ E F + LI R +++ +F ++ + R + V I N +I DGF
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV-----IYNTLI-DGF 336
Query: 166 CVDGKT----------------------CSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
C G SLI + EQR +DE ++E+++ G
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQR---TDEAECMIKEIQEKGIS 393
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ Y +I + A + ++M + GIKP YT +L+ + + +A++L
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F ++ G++PDV +N I+G C +NV+ +++ M+ + PD +T+NT++Q C+
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
++ REL EMK +GI + +++ +I G + +GDI +A + E L+ G
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + GLC+ A ELLK+M K ++P + L+
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 2/277 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+NR A E M G +TC+ +LS + + +L EM +L +
Sbjct: 164 MNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVL--YAEMFRLRIKSSV 221
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ +I L K+ K+ A + M++ G+KP+IV Y +++G A+ +
Sbjct: 222 YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTT 281
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + PD +TY I+G+CKQ +E K+ M + G +P + YNTL+ C
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L+ EM KGI + TY+ +I L + EA +++E KG+ + ++
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ +KA L +M + P + + +LL
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 185/438 (42%), Gaps = 38/438 (8%)
Query: 21 PLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQ-QIPKQPHILSSLLHSFS------- 72
PL+P+ + Q + V+ SLT Q + + P ++ L+ F
Sbjct: 39 PLTPHFLEQSARSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDAR 98
Query: 73 --------IYNCEPPPEAYHFVIKTLA--ENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
+ P A H + + L + +I L R F++ +F L
Sbjct: 99 TLCLAIVIVARLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKS-SIVFDYL 157
Query: 123 IKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGF 165
IK+ D +R ++ FY + + ++NR A + M
Sbjct: 158 IKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRI 217
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
T +++++ +C++ L + FV M+ G +V Y ++ +V A
Sbjct: 218 KSSVYTFNIMINVLCKEGKLKKAK--DFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAA 275
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
IL MK I+PD Y +++G+ Q +A ++F+E++ GL P YN I+G
Sbjct: 276 DAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
C + N++ M + G P + TYN+L+ AL + + ++KE++ KGI +
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
TY+I+I+G + +A L +E L G+ + + L ++ +++A +L K
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455
Query: 406 QMADKDVSPGARVWEALL 423
++ + V P ++ AL+
Sbjct: 456 KITSEGVLPDVIMFNALI 473
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 117/241 (48%), Gaps = 10/241 (4%)
Query: 159 CMIND----GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
CMI + G D T +++++ C + LL EM G YT+++
Sbjct: 382 CMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLH--DEMLASGIKPTKKTYTSLLH 439
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L KK ++ +A + ++ S+G+ PD++ + +++G + A EL ++ + + P
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D T+N + G C++ VE ++ M+ G KPD I++NTL+ + ++ +
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559
Query: 335 KEMKWKGIVLNLQTYSIMIDGLAS--KGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
EM G + TY+ ++ GL +GD+ E LL+E ++KG+ + + I G+
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEE--LLKEMVSKGMTPDDTTYFTLIEGIA 617
Query: 393 Q 393
+
Sbjct: 618 K 618
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A ++ + ++G D + ++ C ++ +++M ++ V
Sbjct: 445 NRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKG--AFELLKDMDRMKVPPDEV 502
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +++ ++ KV +A + ++MK GIKPD + + +++G + D A + +E+
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L G P V TYN + GLCK + +++ M G PD TY TL++ + KV
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ V A E+L M D T + I+ C R+ +E EMK+ G +
Sbjct: 480 SNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC--REGKVEEARELFDEMKRRGIKPDHI 537
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I ++ + DA + N+M G P ++ Y ++ G+ ++ AEEL E+
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597
Query: 268 LVLGLVPDVYTYNVYINGLCKQN 290
+ G+ PD TY I G+ K N
Sbjct: 598 VSKGMTPDDTTYFTLIEGIAKVN 620
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 8/240 (3%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
FVQ ++ G C+ YT +I+ L ++ DA + +M +P + YT++L+G+
Sbjct: 148 FVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLC 207
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+AE L E++ G+VP+V TYN I GLC++ + K++ ME PD
Sbjct: 208 KVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCW 267
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE-- 370
TY ++ LCK ++ +++ E KG+ L + TY+ +I+G GD+ A +L+
Sbjct: 268 TYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLM 327
Query: 371 --EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
+N G+ T F+E I G C G V KA+ L QMA +SP + +L+ S
Sbjct: 328 KRNRVNPGVQT----FNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCS 383
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 33/341 (9%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILN 158
+ + LIK A R D+ +F K+ + ++ RVG A +L
Sbjct: 161 RYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLG 220
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M+N G + T + ++ +C++ D++ +++M+ YT V+ L K
Sbjct: 221 EMVNKGVVPNVVTYNALIGGLCQEGRF--DDVTKLLEKMEIQRHSPDCWTYTQVVHGLCK 278
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV----- 273
KV +L++ G+ +++ Y ++NG Y K ++ L VL L+
Sbjct: 279 HGKVGHGAKVLHEAIGKGVALEVLTYNALING------YCKGGDMKAALDVLQLMKRNRV 332
Query: 274 -PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V T+N I+G C V + + M G P+ +T+N+L+ C V E
Sbjct: 333 NPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALR 392
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ M+ G++ + QTY+I ID L +G + EA L KG+ + ++ + G C
Sbjct: 393 LLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYC 452
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
Q G + A L+++MA ++ P + L+ L V +LD
Sbjct: 453 QVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLD 493
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 125/257 (48%), Gaps = 4/257 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKV 222
G C D + ++++ +C + D+ +M + G+C G+ YT ++ L K +V
Sbjct: 156 GACYDRYSYTILIKGLCAAGRI--DDACRVFAKMSR-GWCRPGVHTYTVLLDGLCKVRRV 212
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+A +L +M + G+ P++V Y ++ G+ + + +L +++ + PD +TY
Sbjct: 213 GEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQV 272
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
++GLCK V G K++ G +V+TYN L+ CK ++ ++++ MK +
Sbjct: 273 VHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRV 332
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+QT++ +I G G + +A L + GL + F+ I G C G + AL
Sbjct: 333 NPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALR 392
Query: 403 LLKQMADKDVSPGARVW 419
LL M + V P + +
Sbjct: 393 LLDLMEEYGVLPDRQTY 409
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 158/350 (45%), Gaps = 38/350 (10%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y+ +I L + +F D++ +L+ +E + + +P D + V+
Sbjct: 229 PNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRH--SP------------DCWTYTQVVH 274
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
K K VG ++L+ I G ++ T + +++ C+ D+ + L +Q M
Sbjct: 275 GLCKHGK-----VGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKA--ALDVLQLM 327
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K+ G+ + VI KV A+ L QM G+ P+ V + +++G +
Sbjct: 328 KRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGER 387
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
A L D + G++PD TY ++I+ LC + +E + +C+ G K + Y +L
Sbjct: 388 KIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSL 447
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ C+V +++ L+++M + + ++ TY+ +IDGL + A LL++ +G+
Sbjct: 448 VHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGI 507
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMA-DKDVSPGARVWEALLLSS 426
+ F+ L+KQM DK + A+++E ++ S
Sbjct: 508 EPTTCTFN----------------ILIKQMLWDKKHADAAKMYEQMISSG 541
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F +L G P+ TYN IN CK + + M E G PD TYN L+ LC+
Sbjct: 78 FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137
Query: 324 VRELNRLRELVKEM--KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC--- 378
L L +M +W G + +Y+I+I GL + G I +AC + + +++G C
Sbjct: 138 AGLLAAACGLFVQMPRRW-GACYDRYSYTILIKGLCAAGRIDDACRVFAK-MSRGWCRPG 195
Query: 379 --TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
T + + D GLC+ V +A LL +M +K V P + AL+
Sbjct: 196 VHTYTVLLD----GLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALI 238
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 168/410 (40%), Gaps = 43/410 (10%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
++ LL I P Y V+ L ++ + + VL H + + LI
Sbjct: 250 VTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVL-HEAIGKGVALEVLTYNALI 308
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK------------- 170
Y + ++++ + + NRV ++ N +I+ GFC GK
Sbjct: 309 NGYCKGGDMKAALDVLQLMKR---NRVNPGVQTFNEVIH-GFCCGGKVHKAMAFLTQMAG 364
Query: 171 --------TCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
T + ++S C +R ++ L + M++ G Y I +L +
Sbjct: 365 AGLSPNTVTFNSLISGQCSVGERKIA----LRLLDLMEEYGVLPDRQTYAIFIDALCDEG 420
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
++ +A + + + GIK V YT +++G D A L +++ +PDV+TYN
Sbjct: 421 QLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYN 480
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
I+GLCK ++ I ++ M++ G +P T+N L++ + ++ ++ ++M
Sbjct: 481 TLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISS 540
Query: 341 GIVLNLQTYSIMI-----DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
G + QTY++ I +G + +I A + EA G+ ++ I G
Sbjct: 541 GCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEA---GVFPDVETYNAIIKAYVDAG 597
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD---FVNTSFIRLVD 442
L KA +M + P + LL +K D F N ++VD
Sbjct: 598 LKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVD 647
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 144/375 (38%), Gaps = 39/375 (10%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
L+ + NC P Y+ +I L + + +LD + K++ E F LIK
Sbjct: 462 GLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKM-KKQGIEPTTCTFNILIKQ 520
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ D+ ++ + MI+ G D +T +L +S+ +
Sbjct: 521 MLWDKKHADAAKMYEQ------------------MISSGCKPDKQTYTLKISTDWFEGAT 562
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK---KEKVFDALGILNQMKSDGIKPDIV 242
+ + V EM + G + Y +I++ V KEK F A +M S I PD
Sbjct: 563 KEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAH---VKMLSVPIDPDCT 619
Query: 243 CYTMVLNGVIVQED--------------YVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
Y+++LN + ++D +ELF+++ P + TY + GLC
Sbjct: 620 TYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCN 679
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
Q +E ++ M+ D + LL C + E + M + L++
Sbjct: 680 QCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKS 739
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
+++ GL GD A + + L G ++ I L ++G LE+L M
Sbjct: 740 CCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMD 799
Query: 409 DKDVSPGARVWEALL 423
K R + +L+
Sbjct: 800 AKKCVASTRTYASLV 814
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 139/274 (50%), Gaps = 8/274 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AIE+ ++ GF + T + ++ +CE S +E ++EM + G + Y +
Sbjct: 426 AIELWYRLLEKGFAANTVTSNALIHGLCEAG--SKEEAAKLLKEMLERGLVLDSISYNTL 483
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K+ KV + + +M GI+PD+ Y M+L+G+ +A L+ E G
Sbjct: 484 ILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN 543
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK---VRELNR 329
PD YTY + I+G CK N VE G K+ M + + + + Y TL++A C+ +RE R
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFR 603
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
LR+ +M+ +GI TYS +I GL++ G + A LL+E +GL + I
Sbjct: 604 LRD---DMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIG 660
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ G + K +L++M+ +V P + ++
Sbjct: 661 GYCKLGQMHKVDSILQEMSINNVHPNKITYTIMI 694
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 175/402 (43%), Gaps = 10/402 (2%)
Query: 30 HQTLDQQQAKQNVKQSLTTPPT-----KQQQQIPKQPHILSSLLHSFSIYNCEPPP--EA 82
HQ Q+ N S+ + P+ +Q + PH + N P
Sbjct: 50 HQLKAPNQSLINSVFSILSNPSFDSSKSKQLLLHLSPHEFDQCFLAIGSNNVNPRTAFNF 109
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
+HF +TL E + + +L H+ + + +L A+ F + +
Sbjct: 110 FHFASETLFEPAVAVTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLL 169
Query: 143 PKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ N V + ++ + M + G D S ++++ C + D+ + ++M+K+G
Sbjct: 170 SSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRV--DDAIELFRKMEKVG 227
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V Y N+I L K ++ +A +M+ + +KP +V Y +++NG++ E + +A
Sbjct: 228 VAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEAN 287
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ E+ G P+ YN I+G C+ N+ +++ M G P+ +T N+L+Q
Sbjct: 288 CILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGY 347
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK ++ L++EM G V+N T++ +I L K A + E L +
Sbjct: 348 CKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPND 407
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + GLCQ G +A+EL ++ +K + AL+
Sbjct: 408 GLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALI 449
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI + A++I + MI++G + TC+ ++ C+ + E L ++EM G
Sbjct: 314 RIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHL--LEEMLTGGGVIN 371
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+T+VI L K + AL + +M KP+ T++++G+ +A EL+
Sbjct: 372 QGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWY 431
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
LL G + T N I+GLC+ + E K++ M E G D I+YNTL+ A CK
Sbjct: 432 RLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEG 491
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L +EM +GI ++ TY++++ GL + G I EA GL E G + +
Sbjct: 492 KVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYG 551
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ V + +L ++M + A V+ L+
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI 589
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 141/313 (45%), Gaps = 21/313 (6%)
Query: 114 TPE-FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
TP+ ++F ++ + R D++ LF K+ K VG A ++ T
Sbjct: 194 TPDVYLFSTMVNAFCTGGRVDDAIELFRKMEK-----VGVAPNVV-------------TY 235
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ I+ +C+ L DE F ++M+K +V Y +I LVK E+ +A IL +M
Sbjct: 236 NNIIHGLCKNGRL--DEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEM 293
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G P+ V Y +++G + A ++ D+++ G+ P+ T N I G CK N +
Sbjct: 294 SDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQM 353
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
E ++ M G + T+ +++ LC + + EM + N +++
Sbjct: 354 EHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLL 413
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ GL G EA L L KG + + I GLC+ G +A +LLK+M ++ +
Sbjct: 414 VSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGL 473
Query: 413 SPGARVWEALLLS 425
+ + L+L+
Sbjct: 474 VLDSISYNTLILA 486
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 21/279 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y+ ++ L + + + +K NF + + +I Y A+R ++
Sbjct: 509 QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDA-YTYGIMIDGYCKANRVEEGE 567
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
LF ++ +I + + ++ + CE ++ E +
Sbjct: 568 KLFQEMVTMKIEQ------------------NAVVYGTLIRAYCENGNMR--EAFRLRDD 607
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M+ G Y+++I L V A +L++M+ +G+ P++VCYT ++ G
Sbjct: 608 MRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
K + + E+ + + P+ TY + ING CK N++A K++ M + G PD +TYN
Sbjct: 668 MHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNA 727
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
L CK ++ ++ M GI L+ TY+ +IDG
Sbjct: 728 LTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 3/207 (1%)
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
C N F D T +++ C+ + E L QEM + V Y +IR+ +
Sbjct: 538 CKKNGNF-PDAYTYGIMIDGYCKANRVEEGEKL--FQEMVTMKIEQNAVVYGTLIRAYCE 594
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ +A + + M+S GI Y+ +++G+ A +L DE+ GL P+V
Sbjct: 595 NGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVC 654
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y I G CK + ++ M P+ ITY ++ CK+ + +L+ EM
Sbjct: 655 YTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMA 714
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEA 365
KGIV + TY+ + +G +G + EA
Sbjct: 715 QKGIVPDAVTYNALTNGFCKEGKMEEA 741
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 155/346 (44%), Gaps = 28/346 (8%)
Query: 97 CDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFYKIPKFRI-------- 147
CD D + N P F +F L D +++ F+K+ KFR+
Sbjct: 164 CDF---FDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCN 220
Query: 148 ---------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
++ G A+ M+ G T ++++ + + DL + L +EMK
Sbjct: 221 ELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL--FEEMK 278
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
G +V Y ++I K + A+ + +MK G +PD++ Y ++N E
Sbjct: 279 AKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIP 338
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A E + GL P+V TY+ I+ CK + K M +G +P+ TY +L+
Sbjct: 339 QAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLI 398
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
A CK+ +LN +L EM+ G+ LN+ TY+ ++DGL G + EA L L G
Sbjct: 399 DANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWT 458
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP-----GARVW 419
++ G + ++ KA+++L++M K++ P G ++W
Sbjct: 459 LNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIW 504
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ L K K AL M G+ P + Y MV+ + + D A LF+E+ G
Sbjct: 222 LLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKG 281
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L PD+ TYN I+G K + + + M++ G +PDVITYN+L+ CK + +
Sbjct: 282 LRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAF 341
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E + MK +G+ N+ TYS +ID G ++EA + + GL + I
Sbjct: 342 EYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDAN 401
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G + +A +L +M V+ + ALL
Sbjct: 402 CKIGDLNEAFKLESEMQQAGVNLNIVTYTALL 433
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 156/375 (41%), Gaps = 20/375 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
S + P Y+ VI LA S+ + + K + + LI
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEM-KAKGLRPDIVTYNSLIDG 295
Query: 126 YADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVD 168
Y +V++F ++ + R+ A E L+ M G +
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S ++ + C+ L E F +M ++G YT++I + K + +A +
Sbjct: 356 VVTYSTLIDAFCKAGMLL--EANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
++M+ G+ +IV YT +L+G+ +AEELF LL G + Y +G K
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+E + ++ M + KPD++ Y T + LC+ E+ +++EM G+ N
Sbjct: 474 AKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYI 533
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ +ID G EA LL+E + G+ + I GLC+ GLV++A+ M
Sbjct: 534 YTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMT 593
Query: 409 DKDVSPGARVWEALL 423
+ P ++ AL+
Sbjct: 594 RNGLQPNIMIYTALI 608
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI G + T + ++ + C+ DL +E EM++ G +V YT ++ L +
Sbjct: 382 MIRVGLQPNEFTYTSLIDANCKIGDL--NEAFKLESEMQQAGVNLNIVTYTALLDGLCED 439
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ +A + + G + YT + +G I + KA ++ +E+ L PD+ Y
Sbjct: 440 GRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLY 499
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I GLC+QN +E + +I M + G + Y TL+ A KV + L++EM+
Sbjct: 500 GTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQD 559
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
GI + + TY ++IDGL G + +A + GL ++ I GLC+ + +
Sbjct: 560 LGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEE 619
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L +M DK +SP V+ +L+
Sbjct: 620 AKNLFNEMLDKGISPDKLVYTSLI 643
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 13/345 (3%)
Query: 72 SIYNC----EPPPEAYHFV--IKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
S+ NC E P+A+ ++ +K S+++D K F+D+I+
Sbjct: 326 SLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRV 385
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RD 184
+ F + + +I + A ++ + M G ++ T + +L +CE R
Sbjct: 386 GLQPNEFTYTSLI---DANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRM 442
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
++EL G + K G+ YT++ +K + + A+ IL +M +KPD++ Y
Sbjct: 443 REAEELFG---ALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLY 499
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+ G+ Q + + + E++ GL + Y Y I+ K + ++ M++
Sbjct: 500 GTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQD 559
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
LG K V+TY L+ LCK+ + + M G+ N+ Y+ +IDGL + E
Sbjct: 560 LGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEE 619
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
A L E L+KG+ ++ I G + G +AL L +M +
Sbjct: 620 AKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVE 664
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 122/267 (45%), Gaps = 2/267 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A E+ ++ G+ ++ + + + + + + ++ + ++EM K ++
Sbjct: 440 GRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM--EKAMDILEEMNKKNLKPDLL 497
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y I L ++ ++ D++ ++ +M G+ + YT +++ +A L E+
Sbjct: 498 LYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEM 557
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
LG+ V TY V I+GLCK V+ ++ M G +P+++ Y L+ LCK L
Sbjct: 558 QDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCL 617
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L EM KGI + Y+ +IDG G+ EA L + G+ +
Sbjct: 618 EEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSL 677
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I G + G V+ A LL +M K + P
Sbjct: 678 IWGFSRYGQVQLAKSLLDEMLRKGIIP 704
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 5/226 (2%)
Query: 202 FCFGM--VDYTNVIRSLVKKEKVFDALGILNQMKS--DGIKPDIVCYTMVLNGVIVQEDY 257
FC GM +D +VI+ + + F + + S + +P + + N ++
Sbjct: 139 FC-GMFYLDARSVIKEWILLGREFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGML 197
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A + F ++ ++P V + N ++ L K + + M G P V TYN +
Sbjct: 198 EEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMV 257
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ L + +L R L +EMK KG+ ++ TY+ +IDG G + A + EE + G
Sbjct: 258 IGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGC 317
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I C+ + +A E L M + + P + L+
Sbjct: 318 EPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE-------M 197
F++ + A+ +L M + G + T +++ +C+ +G VQ+ M
Sbjct: 542 FKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCK---------IGLVQQAVRYFDHM 592
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
+ G ++ YT +I L K + + +A + N+M GI PD + YT +++G + +
Sbjct: 593 TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNP 652
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A L + ++ +G+ D+ Y I G + V+ ++ M G PD + L
Sbjct: 653 GEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICL 712
Query: 318 LQALCKVRELNRLRELVKEMKWKGIV 343
L+ ++ ++N L +M +G++
Sbjct: 713 LRKYYELGDINEALALHDDMARRGLI 738
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 139/274 (50%), Gaps = 2/274 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+ A +LN M D + I+ S+C+ R + D+ L +EM+ G +V Y
Sbjct: 165 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV--DDALNLFKEMETKGIRPNVVTY 222
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+++I L + DA +L+ M I P++V + +++ + + +V+AE+L D+++
Sbjct: 223 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 282
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD++TYN ING C + ++ +M M PD+ TYNTL++ CK + +
Sbjct: 283 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 342
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL +EM +G+V + TY+ +I GL GD A + ++ ++ G+ + +
Sbjct: 343 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 402
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC G + KALE+ M ++ ++ ++
Sbjct: 403 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 131/249 (52%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ + + L + +M KLG+ +V ++++ +++ DA+ +++QM
Sbjct: 48 LLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 107
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +PD + +T +++G+ + +A L D ++ G P++ TY V +NGLCK+ +++
Sbjct: 108 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 167
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ ME + DV+ +NT++ +LCK R ++ L KEM+ KGI N+ TYS +I
Sbjct: 168 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 227
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L S G +A LL + + K + F+ I + G +A +L M + + P
Sbjct: 228 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 287
Query: 415 GARVWEALL 423
+ +L+
Sbjct: 288 DIFTYNSLI 296
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 142/286 (49%), Gaps = 2/286 (0%)
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
L I K + + ++ +L M+ G+ T S +L+ C + +S + + V +M
Sbjct: 48 LLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS--DAVALVDQM 105
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
++G+ + +T +I L K +A+ ++++M G +P++V Y +V+NG+ + D
Sbjct: 106 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 165
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
A L +++ + DV +N I+ LCK +V+ + + ME G +P+V+TY++L
Sbjct: 166 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 225
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LC + +L+ +M K I NL T++ +ID +G +EA L ++ + + +
Sbjct: 226 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 285
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G C + KA ++ + M KD P + L+
Sbjct: 286 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 331
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 160/359 (44%), Gaps = 29/359 (8%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE--NFETPEFIFIDLIKTYADAHRF 132
C+P Y V+ L + DI + + K E E IF +I +
Sbjct: 144 GCQPNLVTYGVVVNGLCKRG---DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200
Query: 133 QDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
D++NLF ++ R N V ++ +++C+ + G D S +LS + E++
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYS-SLISCLCSYGRWSDA---SQLLSDMIEKK------- 249
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+V + +I + VK+ K +A + + M I PDI Y ++NG
Sbjct: 250 -----------INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 298
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + KA+++F+ ++ PD+ TYN I G CK VE G ++ M G D
Sbjct: 299 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 358
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+TY TL+Q L + + +++ K+M G+ ++ TYSI++DGL + G + +A + +
Sbjct: 359 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 418
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ ++ I G+C+ G V +L ++ K V P + ++ SK
Sbjct: 419 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 477
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 27/334 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D IEK+ N P + F LI + +F +
Sbjct: 216 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNALIDAFVKEGKFVE 272
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ L + K I+ F N +IN GFC+ R + ++ F+
Sbjct: 273 AEKLHDDMIKRSIDPDIFT---YNSLIN-GFCM-------------HDRLDKAKQMFEFM 315
Query: 195 QEMKKLGFCFGMVD-YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
CF +D Y +I+ K ++V D + +M G+ D V YT ++ G+
Sbjct: 316 VSKD----CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 371
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D A+++F +++ G+ PD+ TY++ ++GLC +E +++ M++ K D+
Sbjct: 372 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 431
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y T+++ +CK +++ +L + KG+ N+ TY+ MI GL SK + EA LL++
Sbjct: 432 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G S ++ I + G + EL+++M
Sbjct: 492 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD---ALGILNQMKSDGIKP 239
+DL D+ +G M K + ++ ++ ++ K +K FD +L +L +M G +P
Sbjct: 19 KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKK-FDLVISLALLGKMMKLGYEP 77
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
IV + +LNG + A L D+++ +G PD T+ I+GL N + ++
Sbjct: 78 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 137
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M + G +P+++TY ++ LCK +++ L+ +M+ I ++ ++ +ID L
Sbjct: 138 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ +A L +E KG+ + I LC G A +LL M +K ++P +
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 257
Query: 420 EALLLSSVSKLDFV 433
AL+ + V + FV
Sbjct: 258 NALIDAFVKEGKFV 271
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 127/275 (46%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A+ +++ M+ G+ D T + ++ + S E + V M + G +V
Sbjct: 94 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS--EAVALVDRMVQRGCQPNLVT 151
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y V+ L K+ + A +LN+M++ I+ D+V + +++ + A LF E+
Sbjct: 152 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 211
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P+V TY+ I+ LC ++++ M E P+++T+N L+ A K +
Sbjct: 212 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 271
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L +M + I ++ TY+ +I+G + +A + E ++K ++ I
Sbjct: 272 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 331
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ V EL ++M+ + + + L+
Sbjct: 332 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 366
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDG 164
LIK + + R +D LF ++ F A ++ M++DG
Sbjct: 330 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 389
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D T S++L +C L ++ L M+K + YT +I + K KV D
Sbjct: 390 VPPDIMTYSILLDGLCNNGKL--EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ + G+KP++V Y +++G+ + +A L ++ G +PD TYN I
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 507
Query: 285 GLCKQNNVEAGIKMIACMEE 304
+ + A ++I M
Sbjct: 508 AHLRDGDKAASAELIREMRS 527
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 152/319 (47%), Gaps = 19/319 (5%)
Query: 122 LIKTYADAHRFQDSVNL---------------FYKIPKF--RINRVGFAIEILNCMINDG 164
LIK Y D HR +D++ L +Y + F + R+ ++++ M +
Sbjct: 194 LIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTK 253
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D T + ++ +C+ + +DE L F++E +K GF V Y+ ++ S K+ ++
Sbjct: 254 LLADQVTYNTLIHMLCKHQ--HADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQ 311
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A I+N+M + G PD+V YT ++NG + +A ++ ++ G P+ +Y ++
Sbjct: 312 AKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLK 371
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLC++ N +M+ EE P+ ITY+ ++ + +L+ ++V+EM KG
Sbjct: 372 GLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFP 431
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
++++ L G + EA +EE LN G + F I CQ+ + AL LL
Sbjct: 432 TPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLL 491
Query: 405 KQMADKDVSPGARVWEALL 423
M + P A + ++
Sbjct: 492 DDMYLSNKHPDAVTYTTII 510
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 124/236 (52%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
++ L F++ M+ LG +V Y +I+ +V DA+ ++++M G PD V Y V
Sbjct: 170 EKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTV 229
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ + + ++ +++ L+ D TYN I+ LCK + + ++ + ++ G
Sbjct: 230 MGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGF 289
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ D + Y+ ++ + CK +++ +E+V EM +G + ++ TY+ +I+G + G++ +A
Sbjct: 290 QVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARK 349
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L++ G + + + GLCQ+G +A E++K ++ +P A + ++
Sbjct: 350 MLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVM 405
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 112/222 (50%), Gaps = 7/222 (3%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
FC MV Y+ + K+ +A+ +L M+ GI+P+++ ++ +++ KA
Sbjct: 121 FCCVMVSYS-------RAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKAL 173
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ + +LG++P+V TYN I G C + VE +++I+ M G PD ++Y T++ L
Sbjct: 174 RFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFL 233
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK R + + +++++M+ ++ + TY+ +I L EA L EA +G
Sbjct: 234 CKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDK 293
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + C+ G + +A E++ +M + P + A++
Sbjct: 294 VGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAII 335
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 170/417 (40%), Gaps = 61/417 (14%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFE--TPEFIFIDLIK 124
L+ + C P +Y+ V+ L +N + I V+D IEK E+ + + + LI
Sbjct: 210 LISEMPLKGCSPDKVSYYTVMGFLCKNRR---IREVMDVIEKMEDTKLLADQVTYNTLIH 266
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCV 167
+++ + K F++++VG+ A EI+N M G
Sbjct: 267 MLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIP 326
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + I++ + ++ + +Q+M K G V YT ++ L +K +A
Sbjct: 327 DVVTYTAIINGFSQAGEVGQARKM--LQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEARE 384
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGV-----------IVQEDYVK----------------- 259
++ + P+ + Y++V++G +V+E K
Sbjct: 385 MMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLC 444
Query: 260 -------AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
A++ +E L +G + + I+ C+Q+++EA + ++ M PD +
Sbjct: 445 RIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAV 504
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY T++ AL K + EL +M KGI TY +I G + + LL++
Sbjct: 505 TYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKM 564
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
L + C + F++ I LC G + A +LL ++ A L+ S + K
Sbjct: 565 LTRQEC--RTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRK 619
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 146/286 (51%), Gaps = 4/286 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV-QEMKKLGFCFGMVDYTN 211
A +L M+ DG + T ++++ ++C + +E LG V +M+ G +V Y
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQ--REEALGVVGDDMRGAGCAPNVVTYNT 195
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ + + +V A ++ M+ G++P +V + V+NG+ A ++FDE+ G
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG 255
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L PD +YN ++G CK + + + A M + G PDV+T+ +L+ A+C+ L R
Sbjct: 256 LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAV 315
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
LV +M+ +G+ +N T++ +IDG G + +A ++E + ++ I G
Sbjct: 316 ALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGY 375
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
C+ G + +A EL+ +M K + P + +LS K+ +++F
Sbjct: 376 CKLGRMDEARELIHEMEAKGMKPDVVTYST-ILSGYCKIGDTDSAF 420
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 32/372 (8%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEK-----RENFETPEFI-FIDLIKTYAD 128
C P Y+ ++ + FC V D E+ RE P + F ++
Sbjct: 185 GCAPNVVTYNTLV------AAFCRAGEV-DAAERLVGVMREGGVRPSLVTFNTVVNGLCK 237
Query: 129 AHRFQDSVNLFYKIPKFRINRVGF-----------------AIEILNCMINDGFCVDGKT 171
A R +D+ +F ++ + + G A+ + M G D T
Sbjct: 238 AGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVT 297
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
+ ++ ++C +L + + V +M++ G +T +I + + DAL + +
Sbjct: 298 FTSLIHAMCRAGNL--ERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKE 355
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M+ I+P +VCY +++NG +A EL E+ G+ PDV TY+ ++G CK +
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGD 415
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
++ ++ M + G PD ITY++L++ LC+ R L EL ++M G+ + TY+
Sbjct: 416 TDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTT 475
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+IDG +G++ +A L +E + KG+ + I GL + ++A LL ++ +D
Sbjct: 476 LIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYED 535
Query: 412 VSPGARVWEALL 423
P +EAL+
Sbjct: 536 PVPDNIKYEALM 547
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 152/353 (43%), Gaps = 75/353 (21%)
Query: 115 PEFI-FIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKT 171
P+ + F LI A + +V L ++ + R+N F I DGFC +G
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALI------DGFCRNGFL 346
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
D+ L ++EM++ +V Y +I K ++ +A ++++
Sbjct: 347 ----------------DDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHE 390
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M++ G+KPD+V Y+ +L+G D A EL ++L G+VPD TY+ I GLC++
Sbjct: 391 MEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERR 450
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ ++ M +LG +PD TY TL+ CK + + L EM KG++ ++ TYS+
Sbjct: 451 LGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSV 510
Query: 352 MIDGLASKGDIIEACGLL--------------EEALN--------------------KGL 377
+IDGL+ EA LL EAL KGL
Sbjct: 511 LIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGL 570
Query: 378 CTQS----------------SMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
Q+ S++ I G C+ G + KAL KQ+ SP
Sbjct: 571 MNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSP 623
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 119/264 (45%), Gaps = 26/264 (9%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I A E+ M+ G D T S ++ +CE+R L + ++M +LG
Sbjct: 412 KIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLG--DACELFEKMLQLGLQPD 469
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
YT +I K+ V AL + ++M G+ PD+V Y+++++G+ +A+ L
Sbjct: 470 EFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLF 529
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA--CMEELGSKPDVITYNTLLQALCK 323
+L VPD Y ++ C+ ++ + ++ M+ L ++ D + Y ++L
Sbjct: 530 KLYYEDPVPDNIKYEALMH-CCRTAEFKSVVALLKGFSMKGLMNQADKV-YQSML----- 582
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ WK L+ YS++I G G+I++A ++ L G S+
Sbjct: 583 ------------DRHWK---LDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTS 627
Query: 384 FDETICGLCQRGLVRKALELLKQM 407
+ GL + G+ +A +++++
Sbjct: 628 TISLVRGLFEEGMTVEADNVIQEL 651
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 20/324 (6%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYK---IPKFRINRVGF---------------AIEILNC 159
++ LI Y + RF+++ +L YK I F + F A+E L+
Sbjct: 338 LYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDE 397
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ GF + T ++++ C+Q +E V M G V Y +I +L K
Sbjct: 398 MVKKGFEPNVITYTILIDGFCKQGHF--EEASKVVNSMSAKGLSLNTVGYNCLIGALCKD 455
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ DAL + +M S G KPDI + ++ G+ + +A L+ ++L+ G++ + TY
Sbjct: 456 GKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTY 515
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N I+ + ++ K++ M G D ITYN L++ALCK + L+++M
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ I ++ + +I+I+ G + +A L + + +GL ++ I GLC+ G ++
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL L + K + P A + L+
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 170/378 (44%), Gaps = 25/378 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + CEP + ++ VI L + + + + + D + R+ F I L+
Sbjct: 257 LLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD-FTADALIQGYLMHGL 315
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ ++ + KIP N V + N +IN G+ V G+ E +DL
Sbjct: 316 CRMGKVDEARAMLSKIPN--PNTV-----LYNTLIN-GYVVSGR--------FEEAKDL- 358
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ M GF + +I L KK + AL L++M G +P+++ YT+
Sbjct: 359 ------LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTI 412
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G Q + +A ++ + + GL + YN I LCK ++ ++M M G
Sbjct: 413 LIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKG 472
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KPD+ T+N+L+ LCK ++ L ++M +G++ N TY+ +I I +A
Sbjct: 473 CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQAD 532
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
L+ E +G + ++ I LC+ G K L L++QM +++ P +L++S
Sbjct: 533 KLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCN-ILINS 591
Query: 427 VSKLDFVNTSFIRLVDQI 444
+ VN + L D I
Sbjct: 592 FCRTGKVNDALQFLRDMI 609
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 168/408 (41%), Gaps = 66/408 (16%)
Query: 68 LHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYA 127
+HSF +Y + +I L +F I +L + K E E +FI +++ Y
Sbjct: 91 IHSFHVY---------YLLIDKLGNVGEFKMIDKLLKQM-KDEGCVFKESLFILIMRYYG 140
Query: 128 DAHRFQDSVNLFYKI-------PKFRINRVGFAIEIL---NC----------MINDGFCV 167
A + L + P F+ V +EIL NC M++ G
Sbjct: 141 KAGLPGQATRLLLDMWGVYCFEPTFKSYNV--VLEILVAGNCPKVAPNVFYDMLSRGISP 198
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
T +++ + C ++ D +++M K G + Y +I +L + +V +A+
Sbjct: 199 TVYTFGVVMKAFCMVNEV--DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMK 256
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +M G +PD+ + V++G+ +A +L D +L+ D ++GLC
Sbjct: 257 LLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLC 316
Query: 288 KQNNVEAGIKMIA--------------------------------CMEELGSKPDVITYN 315
+ V+ M++ M G +PD T+N
Sbjct: 317 RMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFN 376
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++ LCK L E + EM KG N+ TY+I+IDG +G EA ++ K
Sbjct: 377 IMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAK 436
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + ++ I LC+ G ++ AL++ +M+ K P + +L+
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI 484
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+D+L+G EM+ G + Y +I++L K LG++ QM + I P I +
Sbjct: 531 ADKLVG---EMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++N A + +++ GL PD+ TYN INGLCK + + + ++ G
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
PD +TYNTL+ C N +L+ + G + N T+SI+I+
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
L D V P +YNV + L N + + M G P V T+ +++A C
Sbjct: 152 LLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFC 211
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
V E++ L+++M G V N Y ++I L+ + EA LLEE G
Sbjct: 212 MVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQ 271
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
F++ I GLC+ G + +A +L +M +D + A + L+ L + K+D
Sbjct: 272 TFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVD 322
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV-IRSLVKKEKV 222
G +D T + ++ ++C+ ++++ LG +++M F ++ N+ I S + KV
Sbjct: 542 GCPLDNITYNGLIKALCKTG--ATEKCLGLIEQMFGEEI-FPSINSCNILINSFCRTGKV 598
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DAL L M G+ PDIV Y ++NG+ + +A LF+ L G+ PD TYN
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTL 658
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
I+ C + +++ G P+ IT++ L+ K
Sbjct: 659 ISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+C+++++S C R ++ L F+++M + G +V Y ++I L K + +AL + N
Sbjct: 584 SCNILINSFC--RTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN 641
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+++ GI PD V Y +++ + + A +L + + G +P+ T+++ IN K N
Sbjct: 642 GLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNN 701
Query: 291 N 291
+
Sbjct: 702 S 702
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 168/375 (44%), Gaps = 25/375 (6%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY + V++ L + D +VLD + +R P + +++ F+
Sbjct: 156 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHV-ILEAACRGGGFRS-- 212
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
A+ +L + G +D C+L+L+++C+Q S DE L +++
Sbjct: 213 ----------------AVRVLEDLHARGCALDVGNCNLVLNAICDQG--SVDEALHLLRD 254
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G +V Y V++ L ++ ++ +M P+IV + +++ +
Sbjct: 255 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 314
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ + E+ +++ G PD+ Y I+G+CK+ ++E +++ M G KP+V+ YNT
Sbjct: 315 FERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNT 374
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL+ LC EL+ EM K L+ T++I++D G + LLE+ L G
Sbjct: 375 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ I G C+ GL+ +A+ LLK M P + +L S +V+
Sbjct: 435 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 494
Query: 437 FIRLVDQILNTPCKM 451
L+ Q++ C +
Sbjct: 495 --DLMSQMIQQGCPL 507
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 162/358 (45%), Gaps = 22/358 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE-NFETPEFIFIDLIKTYADAHRFQ 133
C P P YH +++ F VL+ + R + + + D
Sbjct: 189 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLV--LNAICDQGSVD 246
Query: 134 DSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++++L +P F R G E++ M+ + T + ++
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
S +C R+ + + + +M + G + Y +I + K+ + A ILN+M S G
Sbjct: 307 SYLC--RNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+KP++VCY +L G+ E + + EEL E+ D T+N+ ++ C+ V+ I
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 424
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M E G PDVITY T++ CK ++ L+K M G N +Y+I++ GL
Sbjct: 425 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 484
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
S ++A L+ + + +G F+ I LC++GLV +A+ELLKQM SP
Sbjct: 485 CSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSP 542
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 6/263 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ +++M + G ++ YT VI K+ + +A+ +L M + G KP+ + YT+V
Sbjct: 421 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 480
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L G+ E +V AE+L +++ G + T+N IN LCK+ VE I+++ M G
Sbjct: 481 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 540
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD+I+Y+T++ L K + + EL+ M KG+ N YS + L+ +G I +
Sbjct: 541 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 600
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ + + + + + +++ I LC+RG +A+E L M P + L+
Sbjct: 601 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 660
Query: 428 SKLDFVNTSFIRLVDQILNTPCK 450
S+ F++ ++L C
Sbjct: 661 SE------GFVKEAQEMLTELCS 677
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 175/382 (45%), Gaps = 25/382 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + CEP +Y+ V+K L ++ + +++ + + P + + + +Y
Sbjct: 251 LLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMAC--PPNIVTFNTLISY 308
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ + V+ E+L M+ G D + + I+ +C++ L
Sbjct: 309 LCRNGLFERVH-----------------EVLAQMVEHGCTPDIRMYATIIDGICKEGHLE 351
Query: 187 -SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ E+L M G +V Y +++ L E+ + +L +M D V +
Sbjct: 352 VAHEIL---NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFN 408
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++++ + EL +++L G +PDV TY ING CK+ ++ + ++ M
Sbjct: 409 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 468
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G KP+ I+Y +L+ LC +L+ +M +G LN T++ +I+ L KG + +A
Sbjct: 469 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 528
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
LL++ L G + I GL + G +ALELL M +K +SP ++ + + S
Sbjct: 529 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS-IAS 587
Query: 426 SVSKLDFVNTSFIRLVDQILNT 447
++S+ +N I++ D I +T
Sbjct: 588 ALSREGRIN-KVIQMFDNIQDT 608
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 117/225 (52%), Gaps = 4/225 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+ +L M G + + +++L +C +R + +++L+ +M + G + +
Sbjct: 458 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM---SQMIQQGCPLNPITFNT 514
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L KK V A+ +L QM +G PD++ Y+ V++G+ +A EL + ++ G
Sbjct: 515 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 574
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ Y+ + L ++ + I+M +++ + D + YN ++ +LCK E R
Sbjct: 575 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 634
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
E + M G V N TY+I+I GLAS+G + EA +L E +KG
Sbjct: 635 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 35/222 (15%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI------------- 283
+ P+ Y V+ + + A + DE+ G P Y+V +
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214
Query: 284 ----------------------NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
N +C Q +V+ + ++ + G +PDV++YN +L+ L
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C + ++EL++EM N+ T++ +I L G +L + + G
Sbjct: 275 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 334
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
M+ I G+C+ G + A E+L +M + P + LL
Sbjct: 335 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLL 376
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 56/275 (20%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S + C+P +Y V+K L
Sbjct: 461 LLKSMTACGCKPNTISYTIVLKGL------------------------------------ 484
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A R+ D+ +L + MI G ++ T + +++ +C++ +
Sbjct: 485 CSAERWVDAEDLMSQ------------------MIQQGCPLNPITFNTLINFLCKKGLV- 525
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
++ + +++M G ++ Y+ VI L K K +AL +LN M + G+ P+ + Y+
Sbjct: 526 -EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 584
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ + + + K ++FD + + D YN I+ LCK+ E I+ +A M G
Sbjct: 585 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 644
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
P+ TY L++ L + +E++ E+ KG
Sbjct: 645 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN + G C+ +E+ ++ A + P+ TY +++ALC + ++ EM
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+G Y ++++ G A +LE+ +G + + +C +G V
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+AL LL+ + P + A+L
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVL 271
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 169/366 (46%), Gaps = 32/366 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PPP F K L ++ S+VL ++ ++F P TY ++
Sbjct: 5 RPPPSIVDFS-KLLTSITRMKHYSTVLSLYKQMDSFGIPH-------NTY--------TL 48
Query: 137 NLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
N+ I F +NR+GFA +L ++ G+ T + ++ +C + + E L
Sbjct: 49 NIL--INSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIG--EALQLFD 104
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M GF ++ Y +I L K ++ +AL + + M + GI P+ Y+ +++G+ +
Sbjct: 105 KMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILG 164
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL---GSKPDVI 312
+ +A LF ++ ++PD T+N ++ LCK+ ++ K + EE+ G PD +
Sbjct: 165 HWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTV 224
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYNTL+ LC V L L EM G + +L TY I+ D L + EA LL+
Sbjct: 225 TYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVI 284
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL--------LL 424
L ++ + G+C+ G + A +L +++ K + P R + + LL
Sbjct: 285 EGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLL 344
Query: 425 SSVSKL 430
+ SKL
Sbjct: 345 AEASKL 350
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
+GFC D T + +++ +C + E++ F+ E GF + Y ++I L K +
Sbjct: 296 EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEK---GFELDVYTYNSLISGLCKLGE 352
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-ELFDELLVLGLVPDVYTYN 280
+ +A+ IL+ M S +P+ V Y ++ G + +E++V+A EL L G++PDV T+N
Sbjct: 353 IDEAVEILHHMVSRDCEPNTVTYNTLI-GTLCKENHVEAATELARVLTSKGVLPDVCTFN 411
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
I GLC +N E +++ M+E G PD TY+ L+++LC R L L+KEM+
Sbjct: 412 SLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELS 471
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G N+ Y+ +IDGL + +A + ++ G+ S ++ I GLC+ V +A
Sbjct: 472 GCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEA 531
Query: 401 LELLKQMADKDVSPGARVWEALL 423
+L+ QM + + P + +L
Sbjct: 532 AQLMDQMIMEGLKPDKFTYTTML 554
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 6/269 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVC--EQRDLSSDELLGFVQEMKKLGFCFG 205
N V A E+ + + G D T + ++ +C R+++ + +EMK+ G
Sbjct: 386 NHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAME----LFEEMKEKGCDPD 441
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y+ +I SL + ++ +AL +L +M+ G ++V Y +++G+ AE++FD
Sbjct: 442 EFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFD 501
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ +LG+ TYN INGLCK VE +++ M G KPD TY T+L+ C+
Sbjct: 502 QMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQG 561
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ R ++V+ M G ++ TY +I GL G + A LL KG+ ++
Sbjct: 562 DIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYN 621
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I LC+R ++A+ L ++M +K P
Sbjct: 622 PVIQALCKRKRTKEAMRLFREMMEKGDPP 650
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 179/403 (44%), Gaps = 29/403 (7%)
Query: 50 PTKQQQQIPKQPHILSSLLHSFSIYNCEP----PPEAYHFVIKTLAENSQFCDISSVLDH 105
P++ + +QP SS L F + +P P +H +++ LA F + ++L
Sbjct: 59 PSQLLDLLRRQPDS-SSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQ 117
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI--------PKFRINRVGFA---- 153
+ + E F+ ++TYA +H +N + + P R V +
Sbjct: 118 MHSSK-IPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVK 176
Query: 154 ------IEILNC-MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+E L+ M+ D D T ++++ ++C+ L L+ +++M G
Sbjct: 177 ANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILM--LEDMPNYGLRPDE 234
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+T +++ +++ V AL I M G + V +++NG+ + +A E
Sbjct: 235 KTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE 294
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
G PD T+N +NGLC+ +++ G++M+ M E G + DV TYN+L+ LCK+ E
Sbjct: 295 --EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGE 352
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ E++ M + N TY+ +I L + + A L +KG+ F+
Sbjct: 353 IDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNS 412
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
I GLC A+EL ++M +K P + L+ S S+
Sbjct: 413 LIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSE 455
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + +E+++ M+ GF +D T + ++S +C+ ++ DE + + M
Sbjct: 314 RTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEI--DEAVEILHHMVSRDCEPN 371
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I +L K+ V A + + S G+ PD+ + ++ G+ + + A ELF+
Sbjct: 372 TVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFE 431
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PD +TY++ I LC + ++ + ++ ME G +V+ YNTL+ LCK
Sbjct: 432 EMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN 491
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++ +M+ G+ + TY+ +I+GL + EA L+++ + +GL +
Sbjct: 492 RVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYT 551
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ CQ+G +++A ++++ M P + L+
Sbjct: 552 TMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLI 589
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 38/294 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M G D T S+++ S+C +R L E L ++EM+ G +V Y +
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIESLCSERRLK--EALMLLKEMELSGCARNVVVYNTL 483
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K +V DA I +QM+ G+ V Y ++NG+ + +A +L D++++ GL
Sbjct: 484 IDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGL 543
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL-------------- 318
PD +TY + C+Q +++ ++ M G +PD++TY TL+
Sbjct: 544 KPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASK 603
Query: 319 ---------------------QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
QALCK + L +EM KG ++ TY I+ GL
Sbjct: 604 LLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLC 663
Query: 358 SKGDII-EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+ G I EA E L KG+ + F GLC + ++L+ + +K
Sbjct: 664 NGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEK 717
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIE------------------- 107
LL + C Y+ +I L +N++ D + D +E
Sbjct: 464 LLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC 523
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCV 167
K + E + +I +F + L Y + I R A +I+ M +G
Sbjct: 524 KSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKR---AADIVQNMTLNGCEP 580
Query: 168 DGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
D T ++ +C+ + D++S +LL VQ MK G Y VI++L K+++ +A
Sbjct: 581 DIVTYGTLIGGLCKAGRVDVAS-KLLRSVQ-MK--GMVLTPQAYNPVIQALCKRKRTKEA 636
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVLGLVPDVYTYNVYIN 284
+ + +M G PD++ Y +V G+ ++ A + E+L G++P+ ++
Sbjct: 637 MRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAE 696
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GLC + + I++I + E G T ++++ K+++ N
Sbjct: 697 GLCSLSMEDTLIQLINMVMEKGRFSQSET--SIIRGFLKIQKFN 738
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 158/339 (46%), Gaps = 27/339 (7%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV-------- 150
+E + + ++F LI Y ++ +D++ + + +P +V
Sbjct: 43 VETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLK 102
Query: 151 ------GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
GF EIL C G+ ++++ C+ D+ + + K G
Sbjct: 103 YFKLVWGFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRP 156
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y ++ ++ + + + + M + G++PD+ Y++++NG+ + A ELF
Sbjct: 157 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 216
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+LV GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 217 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 276
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L + L+ EM K + + TY+ +IDG +GD+ A + + + + +
Sbjct: 277 GDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 336
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLCQ G A ++L++M + + P +R + ++
Sbjct: 337 TALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMII 375
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPN 227
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A L D
Sbjct: 228 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLID 287
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + L PD TY I+G CK+ ++++ + M + + D + Y L+ LC+
Sbjct: 288 EMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEG 347
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 348 RSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 398
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 212 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 269
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M +KPD + YT +++G + D A E ++ +
Sbjct: 270 IYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENI 329
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ + +
Sbjct: 330 RLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSK 389
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 390 LLKEMQRDGHVPSVVTYNVLMNG 412
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 181/387 (46%), Gaps = 26/387 (6%)
Query: 77 EPPPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQ 133
PPP +HF ++ +L N + + S+ E N TP+ + LI +
Sbjct: 52 RPPPPTFHFNNILSSLVNNKHYPTVISLFKQFE--PNGITPDLCTLSILINCFCHQAHIT 109
Query: 134 DSVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCVDGKTCSLIL 176
+ ++F I K F N + A+ + ++ GF +D + ++
Sbjct: 110 LAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLI 169
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C+ + + L +++++ +V Y +I SL K + + DA + ++M G
Sbjct: 170 NGLCKTGETKAVARL--LRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 227
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I PD+V YT +++G + +A L +E+ + + P+V T+N+ I+ L K+ ++
Sbjct: 228 ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAK 287
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++A M + KPDV TYN+L+ V E+ + + M +G+ ++Q Y+ MI+GL
Sbjct: 288 ILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGL 347
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ EA L EE +K + ++ I GLC+ + +A+ L K+M ++ + P
Sbjct: 348 CKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDV 407
Query: 417 RVWEALL--LSSVSKLDFVNTSFIRLV 441
+ LL L +L+ F RL+
Sbjct: 408 YSYTILLDGLCKSGRLEDAKEIFQRLL 434
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+G A ++ + MI G D T + ++ C L E + EMK + +
Sbjct: 213 LGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLK--EAFSLLNEMKLKNINPNVCTF 270
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I +L K+ K+ +A +L M IKPD+ Y +++G + ++ A+ +F +
Sbjct: 271 NILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQ 330
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ PDV Y INGLCK V+ + + M+ PD++TYN+L+ LCK L R
Sbjct: 331 RGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLER 390
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L K MK +GI ++ +Y+I++DGL G + +A + + L KG + I
Sbjct: 391 AIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLIN 450
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
LC+ G +AL+L +M DK P A ++ ++ + K
Sbjct: 451 RLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEK 490
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 107/199 (53%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++I ++V A + M G+ PD+ CYT ++NG+ + +A LF+E+
Sbjct: 305 YNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMK 364
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
++PD+ TYN I+GLCK +++E I + M+E G +PDV +Y LL LCK L
Sbjct: 365 HKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLE 424
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+E+ + + KG LN+ Y+++I+ L G EA L + +KG + FD I
Sbjct: 425 DAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIII 484
Query: 389 CGLCQRGLVRKALELLKQM 407
L ++ KA ++L++M
Sbjct: 485 RALFEKDENDKAEKILREM 503
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 138/283 (48%), Gaps = 13/283 (4%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFV--IKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
++L+H F I EA+ + +K N C + ++D + K + + + +
Sbjct: 236 TTLIHGFCIMG--HLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293
Query: 123 IKT--YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+K D + ++ + F ++ V A + M G D + + +++ +C
Sbjct: 294 MKACIKPDVFTYNSLIDGY-----FLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLC 348
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ + + DE + +EMK +V Y ++I L K + A+ + +MK GI+PD
Sbjct: 349 KTKMV--DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPD 406
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+ YT++L+G+ A+E+F LL G +V+ Y V IN LCK + + + +
Sbjct: 407 VYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKS 466
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
ME+ G PD +T++ +++AL + E ++ ++++EM +G++
Sbjct: 467 KMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 180/370 (48%), Gaps = 26/370 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + C+P +Y+ +I LA + + + R+ +E PE + TY
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSV-LRQGYE-PE------VPTY 296
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ D + + +RV A E+ + ++ G D T ++ + +C+ +
Sbjct: 297 ---NILIDGL--------LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 345
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D LL +++M + G +V + VI L K+++V +A +L+ M++ G P+ + +
Sbjct: 346 -DALL-MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 403
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK---QNNVEAGIKMIACME 303
++ G + KA F E+L G+ P V TYN+ ++GLCK + ++ I + M
Sbjct: 404 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 463
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G PDV+TY+ L+ L K +L+ R L+ M+ KG + N+ TY+ +I GL +
Sbjct: 464 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVD 523
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EA L + KG + + I LC++ +V KAL L + V P + ++ +L+
Sbjct: 524 EALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLI 583
Query: 424 --LSSVSKLD 431
L +V+++D
Sbjct: 584 DGLCAVARVD 593
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 154/325 (47%), Gaps = 17/325 (5%)
Query: 129 AHRFQDS--VNLFYKIPKF--------RINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
AHRF + V I F R +R+G A + + M GF + T + +LS
Sbjct: 35 AHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSG 94
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C +S + L + M K G+ +V Y ++ K K+ +AL I + G
Sbjct: 95 LCNGGRMSDAQAL--YERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFV 152
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD+V Y ++NG + +A+ + ++ LVPDV TYN +NGLCK V+ +
Sbjct: 153 PDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML 212
Query: 299 IACMEELGSKPDVITYNTLLQALCK-VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
I + G P+VITY+TL+ LC+ +R L R+L+++M G ++ +Y+ +I GLA
Sbjct: 213 IV---DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLA 269
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ + EA L L +G + ++ I GL + V +A EL + + P A
Sbjct: 270 REQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 329
Query: 418 VWEALLLSSVSKLDFVNTSFIRLVD 442
+ + + + K V + + L D
Sbjct: 330 TY-TVFIDGLCKAGRVEDALLMLKD 353
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 146/278 (52%), Gaps = 8/278 (2%)
Query: 160 MINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
+++ GF + T S ++S +C E R L S L +++M G +V Y +I L +
Sbjct: 213 IVDKGFSPNVITYSTLISGLCRELRRLESARQL--LEKMVLNGCKPDIVSYNALIHGLAR 270
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
++ V +AL + + G +P++ Y ++++G++ ++ +A ELF L+ GL PD T
Sbjct: 271 EQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAIT 330
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y V+I+GLCK VE + M+ M+E G PDV+++N ++ LCK + ++ L+ M+
Sbjct: 331 YTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME 390
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC---QRG 395
KG N +++ +I G G +A +E L +G+ ++ + GLC Q G
Sbjct: 391 AKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEG 450
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+++A+ L M +K P + AL+ L KLD
Sbjct: 451 RIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 488
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 176/389 (45%), Gaps = 49/389 (12%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
++ I L S+ D +V D + K F + L+ + R D+ L+ ++
Sbjct: 53 FNIYISGLCRASRIGDAQTVFDGMRK-HGFWPNRITYNALLSGLCNGGRMSDAQALYERM 111
Query: 143 PKF-----------------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
K ++ ++ A++I + + GF D T + +++ C+ L
Sbjct: 112 IKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKL 171
Query: 186 S----------SDELL----------------GFVQEMKKL----GFCFGMVDYTNVIRS 215
S+ L+ G V E + L GF ++ Y+ +I
Sbjct: 172 DEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISG 231
Query: 216 LVKK-EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L ++ ++ A +L +M +G KPDIV Y +++G+ ++ +A +LF +L G P
Sbjct: 232 LCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEP 291
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+V TYN+ I+GL K++ V ++ + + + G +PD ITY + LCK + ++
Sbjct: 292 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 351
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
K+M KG V ++ +++ +I+GL + + EA LL KG + F+ ICG C+
Sbjct: 352 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 411
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G +KA+ K+M + V P + L+
Sbjct: 412 GKWKKAMTTFKEMLKRGVKPTVVTYNILV 440
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 2/205 (0%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD ++L ++ KA ++LLV GL D+ T+N+YI+GLC+ + + +
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M + G P+ ITYN LL LC ++ + L + M G ++ TY+ ++ G
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + EA + + A+ +G ++ I G C+ + +A +L++M + + P
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192
Query: 419 WEALLLSSVSKLDFVNTSFIRLVDQ 443
+ + L++ + K V+ + + +VD+
Sbjct: 193 YNS-LVNGLCKNGRVDEARMLIVDK 216
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 159/348 (45%), Gaps = 21/348 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S NC+P Y +I +L ++ Q + ++ + + F + L+
Sbjct: 183 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG-QGISPDIFTYTSLVHAL 241
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ ++ L LN M+N D S ++ ++C++ ++
Sbjct: 242 CNLCEWKHVTTL------------------LNQMVNSKILPDVVIFSTVVDALCKEGKVT 283
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E V M + G +V YT ++ + ++ +A+ + + M G PD++ YT
Sbjct: 284 --EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT 341
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG KA LF+E+ +PD TYN ++GLC ++ I + M G
Sbjct: 342 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD++TY+ LL +LCK L L+K ++ + ++Q Y+I+IDG+ G++ A
Sbjct: 402 QMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 461
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L +KGL ++ I GLC+RGL+ +A +L +M D SP
Sbjct: 462 DLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 509
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 191/421 (45%), Gaps = 66/421 (15%)
Query: 62 HILSSLLHSFS-IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
+ L L SF+ + + PPP F K L ++ S+VL + ++F P ++
Sbjct: 35 NTLDDALSSFNRLLHMHPPPSIVDFA-KLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT 93
Query: 121 --DLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMI 161
LI ++ +R + ++ KI K ++G A+ + + MI
Sbjct: 94 LNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 153
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
++GF + T +++ +C+ + S+ + ++ M++ +V YT++I SL K +
Sbjct: 154 DEGFQPNVVTYGTLINGLCKVGNTSA--AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 211
Query: 222 VFDALGILNQMKSDGIKPDIVCYT-----------------------------------M 246
V +A + +QM GI PDI YT
Sbjct: 212 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 271
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++ + + +A E+ D ++ G+ PDV TY ++G C Q+ ++ +K+ M G
Sbjct: 272 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PDVI+Y TL+ CK+ ++++ L +EM K + + +TY+ ++ GL G + +A
Sbjct: 332 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAI 391
Query: 367 GLLEEALNKG----LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
L E + +G L T S + D LC+ + +A+ LLK + +++P +V+ +
Sbjct: 392 ALFHEMVARGQMPDLVTYSILLDS----LCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447
Query: 423 L 423
+
Sbjct: 448 I 448
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 140/273 (51%), Gaps = 16/273 (5%)
Query: 153 AIEILNCMINDGFCVDGKT-CSLI--LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
A + + M+ G D T SL+ L ++CE + +++ + +M +V +
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTT-----LLNQMVNSKILPDVVIF 269
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ V+ +L K+ KV +A I++ M G++PD+V YT +++G +Q + +A ++FD ++
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK---PDVITYNTLLQALCKVRE 326
G PDV +Y ING CK + ++ K + EE+ K PD TYNTL+ LC V
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKID---KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGR 386
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L L EM +G + +L TYSI++D L + EA LL+ L +++
Sbjct: 387 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNI 446
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
I G+C+ G + A +L ++ K + P VW
Sbjct: 447 IIDGMCRAGELEAARDLFSNLSSKGLHPS--VW 477
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 117/230 (50%), Gaps = 2/230 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I+++ A+ + M + D KT + ++ +C L + + EM G
Sbjct: 348 KIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQ--DAIALFHEMVARGQMPD 405
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+ ++ SL K + +A+ +L +++ + PDI Y ++++G+ + A +LF
Sbjct: 406 LVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFS 465
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L GL P V+TYN+ I+GLCK+ + K+ M+ PD TYNT+ + +
Sbjct: 466 NLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 525
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
E R +L++EM +G ++ T +++++ L+ G +C L+ L++
Sbjct: 526 ETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLSE 575
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 152/337 (45%), Gaps = 22/337 (6%)
Query: 110 ENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG 169
E F+ +I L++ Y F ++ L + + + N V N +IN G C+
Sbjct: 465 EGFKPNVVTYITLMRGYIAKKDFDNAYAL---LDEMKQNGVSCNDYTYNVLIN-GICMVD 520
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+ C E+ G ++ GF M+ Y ++I VK + A +
Sbjct: 521 RVC----------------EVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVY 564
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
QM+ G+ P+I+ YT ++G A ++ +++ GL PD+ YN ING C++
Sbjct: 565 QQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQE 624
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
N+ ++++ + + G P+ + YN+L+ + + + + + M GIV + TY
Sbjct: 625 GNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTY 684
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ +IDG + G++ A L E + KG + F GLC+ G + A +LL++M
Sbjct: 685 TTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRR 744
Query: 410 KDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
DV P ++ L+ + RL D++LN
Sbjct: 745 LDVRPNVFIYNMLINGYLRDCKLQEA--FRLHDEMLN 779
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 117/235 (49%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E L MKK G + Y +++ KK + +A+ + ++M +G KP++V Y ++
Sbjct: 419 EALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLM 478
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G I ++D+ A L DE+ G+ + YTYNV ING+C + V M+ G
Sbjct: 479 RGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFI 538
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P ++TYN+++ K + + ++M+ KG+ N+ TY+ IDG G A +
Sbjct: 539 PTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKM 598
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + +GL ++ I G CQ G + AL+LL + ++P V+ +L+
Sbjct: 599 LNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLI 653
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 129/265 (48%), Gaps = 3/265 (1%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
VG A+ + + DG V K +L C+Q ++ + ++M G +
Sbjct: 313 VGNALNLFKETLKDGI-VPTKVMYGVLIRGCDQVGMTQ-KAYELCRQMTGQGLLPSTFEL 370
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ V++ L+ + DA+ + +M G+ PD+ Y +++ +A LFD +
Sbjct: 371 SLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKK 429
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ P + TYN + G CK+ ++ +K+ + M G KP+V+TY TL++ ++ +
Sbjct: 430 AGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDN 489
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L+ EMK G+ N TY+++I+G+ + E G+L+ +++G ++ I
Sbjct: 490 AYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIIN 549
Query: 390 GLCQRGLVRKALELLKQMADKDVSP 414
G + G++ A + +QM +K + P
Sbjct: 550 GFVKAGMMGSAFTVYQQMREKGLPP 574
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 110/236 (46%), Gaps = 2/236 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+G A + M G + T + + C R SD L + ++++ G +V Y
Sbjct: 557 MGSAFTVYQQMREKGLPPNIITYTSFIDGYC--RTGCSDMALKMLNDVRRRGLQPDIVAY 614
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I ++ + AL +L + DG+ P+ V Y ++ G + + ++ ++
Sbjct: 615 NALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIK 674
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+V D TY I+G K NV +++ + M G PD T+ L LC+ +++
Sbjct: 675 GGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDG 734
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++L++EM+ + N+ Y+++I+G + EA L +E LN G+ + +D
Sbjct: 735 AKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYD 790
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 142/328 (43%), Gaps = 21/328 (6%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCV 167
+ + ++F L+ +D+V LF ++P I+
Sbjct: 184 RGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDP------------------ 225
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D + +L ++++C+ D L ++EMK++GF Y ++ LVK ++ +AL
Sbjct: 226 DQRVYALAITALCKLGD--GGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALR 283
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ ++M+ G K D++ T ++ G ++++ A LF E L G+VP Y V I G
Sbjct: 284 VNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCD 343
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ + ++ M G P + +L+ L R L +EM G+ ++
Sbjct: 344 QVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVF 402
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ +I + EA L + G+ + ++ + G C++G + +A++L +M
Sbjct: 403 TYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEM 462
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNT 435
+ P + L+ ++K DF N
Sbjct: 463 PMEGFKPNVVTYITLMRGYIAKKDFDNA 490
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T+++ + DAL + +M+ G + D + +++ + + + A LFDE+
Sbjct: 161 TDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPG 220
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD Y + I LCK + ++M+ M+E+G TY T++ L K +
Sbjct: 221 AEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEE 280
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ EM+ G +++ + ++ G + ++ A L +E L G+ M+ I
Sbjct: 281 ALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIR 340
Query: 390 GLCQRGLVRKALELLKQMADKDVSP 414
G Q G+ +KA EL +QM + + P
Sbjct: 341 GCDQVGMTQKAYELCRQMTGQGLLP 365
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 2/257 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M+ G D K+ + +L + R S+ + L EM+ G+ + +
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLL--IRTARGSSAKDALALFMEMRGRGYRVDAWMFDAL 198
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + +K+ DA+ + ++M I PD Y + + + D +A + E+ +G
Sbjct: 199 MSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGF 258
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+TY ++ L K +E +++ M + G K DVI TL++ C +E+
Sbjct: 259 DTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALN 318
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L KE GIV Y ++I G G +A L + +GL + + GL
Sbjct: 319 LFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLL 378
Query: 393 QRGLVRKALELLKQMAD 409
+ A+ L ++MAD
Sbjct: 379 NDRRWKDAVCLFEEMAD 395
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 158/340 (46%), Gaps = 29/340 (8%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF----------------------YKIP 143
+E + N + ++F LI Y ++ +D++ + K+
Sbjct: 62 LETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK 121
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
F++ GF EIL C G+ ++++ C+ D+ + + K G
Sbjct: 122 YFKL-VWGFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLR 174
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y ++ ++ + + + + M + G++PD+ Y++++NG+ + A EL
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANEL 234
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
FDE+LV GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 235 FDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+L + +L+ EM KG+ + TY+ +IDG +GD+ A + + + +
Sbjct: 295 KGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLCQ G A ++L++M + P + ++
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 394
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 115/232 (49%), Gaps = 4/232 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCF 204
R+ + + + M+ G D T S++++ +C++ + ++EL EM G
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELF---DEMLVKGLVP 245
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L
Sbjct: 246 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 305
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+ + GL PD +TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 306 DEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQE 365
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ + LL+E G
Sbjct: 366 GRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDG 417
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 185/417 (44%), Gaps = 73/417 (17%)
Query: 48 TPPTKQQQQIPKQPHILSSLLH-------SFSIY------NCEPPPE------AYHFVIK 88
T T+ + Q P P LSSLL + ++ + EPP +Y +I
Sbjct: 64 TNDTQMKTQKPISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIIS 123
Query: 89 TLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRIN 148
L F ++ +L +++ F E IF ++I Y AH + +F +IP FR
Sbjct: 124 KLGRAKMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCK 183
Query: 149 RVGFAIEILNCM----------------INDGFCVDGKTCSLILSSVCEQRDLSSDELLG 192
R ++ L I++ D T ++++ + C DL D + G
Sbjct: 184 RTVKSVNSLLAALLKNRQLEKMTQVFVDISNYGSPDACTFNILIHAACLCGDL--DAVWG 241
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYTMVLNGV 251
EM+K G +V + +I L K+ +AL + M K IKP+ YT ++ G
Sbjct: 242 VFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGF 301
Query: 252 I----------VQEDYV----------------------KAEELFDELLVLG---LVPDV 276
++E+ V + EE+ D L +G PD
Sbjct: 302 CGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDT 361
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
TYN ING CK+N++E+ +++ M E G KPDV ++NT++ LCK +L++ +L+++
Sbjct: 362 VTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLED 421
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
M +G ++ +Y I+ DGL + EA +L+E + KG ++ ++ + LCQ
Sbjct: 422 MPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQ 478
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I +L K + + IL +M +G KPD V Y ++NG + D A + DE++
Sbjct: 329 YSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMV 388
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PDV+++N I LCK+ ++ + ++ M G PDV++Y + LC++ +L
Sbjct: 389 EKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLK 448
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ EM +KG V ++ + ++D L + + +E ++ +L +G
Sbjct: 449 EATSILDEMIFKGYVPRNESINKLVDRLCQECN-MELLWMILNSLGRG 495
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 18/227 (7%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ + FA ++ M+ + S ++S++ + +E+ ++EM + G
Sbjct: 304 VGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHG--RKEEVSDILREMGENGCKPDT 361
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y +I K+ + A ++++M G KPD+ + ++ + + KA +L ++
Sbjct: 362 VTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLED 421
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK--- 323
+ G PDV +Y + +GLC+ ++ ++ M G P + N L+ LC+
Sbjct: 422 MPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECN 481
Query: 324 -------VRELNRLRELVKEMKWKGIVL-----NLQTYSIMIDGLAS 358
+ L R + +M W +V NL S +ID L S
Sbjct: 482 MELLWMILNSLGRGNRMNMDM-WARVVAFVYKENLSESSNLIDSLIS 527
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 110 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 163
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 164 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 223
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +LN+
Sbjct: 224 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQA 283
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 284 HGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISG 343
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P + ++
Sbjct: 344 LCQEGRPVDAEKMLREMLSVGLKPDTGTYTMII 376
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 171 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPN 228
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A L D
Sbjct: 229 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLID 288
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +TY I+G CK+ +++A + M + + D + Y ++ LC+
Sbjct: 289 EMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEG 348
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ + LL+E G
Sbjct: 349 RPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 399
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 213 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLLPDLITYNTL 270
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A G++++M G+KPD YT +++G + D A E ++ +
Sbjct: 271 IYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENI 330
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ + +
Sbjct: 331 RLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSK 390
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 391 LLKEMQRNGHVPSVXTYNVLMNG 413
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 177/398 (44%), Gaps = 26/398 (6%)
Query: 49 PPTKQQQQI----PKQPHILS--SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSV 102
PP Q +I K H + SL H + +P + +I Q SV
Sbjct: 305 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSV 364
Query: 103 LDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI--PKFRINRVGFAIEILN-C 159
L I KR + LIK + + +++ K+ F++N+V +A I C
Sbjct: 365 LAKILKR-GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 423
Query: 160 MINDGFC-------VDGKTC-------SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
I D +DG+ S I+ ++C+ + +S E G EM G
Sbjct: 424 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS--EAYGLFSEMTVKGISAD 481
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+ +I K+ +A+G+LN+M I PD+ YT++++ + + +A+ +
Sbjct: 482 VVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLA 541
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L + PDV+TYN +NG V+ + M +G PDV TY L+ CK +
Sbjct: 542 VMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSK 601
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L KEM K +V + TYS ++DGL G I L++E ++G ++
Sbjct: 602 MVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYN 661
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G + KA+ L +M D+ + P + LL
Sbjct: 662 SLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILL 699
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 136/264 (51%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G D T S ++ C L E +G + EM + YT ++ +L K+
Sbjct: 473 MTVKGISADVVTYSTLIYGFCIVGKLK--EAIGLLNEMVLKTINPDVRTYTILVDALGKE 530
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
KV +A +L M +KPD+ Y ++NG ++ + KA+ +F+ + ++G+ PDV+TY
Sbjct: 531 GKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTY 590
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ING CK V+ + + M + PD +TY++L+ LCK ++ + +L+ EM+
Sbjct: 591 TILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRD 650
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G ++ TY+ +IDGL G + +A L + ++G+ + F + GLC+ G ++
Sbjct: 651 RGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKD 710
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A E+ + + K ++ ++
Sbjct: 711 AQEVFQDLLTKGYHLDVYIYNVMI 734
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 102/199 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +I K + V +AL + +M + PD V Y+ +++G+ +L DE+
Sbjct: 590 YTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMR 649
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G DV TYN I+GLCK +++ I + M++ G +P+ T+ LL LCK L
Sbjct: 650 DRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 709
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+E+ +++ KG L++ Y++MI G +G + EA +L + G + FD I
Sbjct: 710 DAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIII 769
Query: 389 CGLCQRGLVRKALELLKQM 407
L ++ KA +LL+QM
Sbjct: 770 NALFKKDENDKAEKLLRQM 788
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 7/227 (3%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F + L+ D H + +N F K V A+ + M D T S ++
Sbjct: 575 FNAMSLMGVTPDVHTYTILINGFCKS-----KMVDEALNLFKEMHQKNMVPDTVTYSSLV 629
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+C+ +S + + EM+ G ++ Y ++I L K + A+ + N+MK G
Sbjct: 630 DGLCKSGRIS--YVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I+P+ +T++L+G+ A+E+F +LL G DVY YNV I G CKQ +E +
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEAL 747
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
M++ MEE G P+ +T++ ++ AL K E ++ +L+++M +G++
Sbjct: 748 TMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 8/203 (3%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+L +L ++ G PD V ++ G+ ++ +A D+LL G + +Y IN
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G+C+ + A IK + ++ +KP+V YNT++ ALCK + ++ L EM KGI
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLE----EALNKGLCTQSSMFDETICGLCQRGLVRKA 400
N+ TYS +I G G + EA GLL + +N +CT + + D LC+ G V++A
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVD----ALCKEGKVKEA 222
Query: 401 LELLKQMADKDVSPGARVWEALL 423
+L M V + L+
Sbjct: 223 KSVLAVMLKACVKSNVITYSTLM 245
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 152/331 (45%), Gaps = 43/331 (12%)
Query: 46 LTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDH 105
+++P T Q Q P + +C+ PP F + +N SVL
Sbjct: 10 ISSPTTSQNSQSPT------------PLKDCDSPP----FFLPPSIQNVDDAVSLSVLTK 53
Query: 106 IEKRENFETPEFIFID-LIKTYADAHRFQDSVNLFYKI--PKFRINRVGFAIEILNCMIN 162
I KR P+ + ++ LIK + +++++ K+ F++N+V +A I
Sbjct: 54 ILKRG--YPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLI------ 105
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
+G C G T + I F++++ + Y +I +L K + V
Sbjct: 106 NGVCRIGDTRAAI----------------KFLRKIDGRLAKPNVEMYNTIIDALCKYQLV 149
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+A G+ ++M GI ++V Y+ ++ G + +A L + +++ + P+V TYN+
Sbjct: 150 SEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNIL 209
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
++ LCK+ V+ ++A M + K +VITY+TL+ V E+ + + + M G+
Sbjct: 210 VDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 269
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
++ +Y+IMI+G + +A L +E +
Sbjct: 270 TPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 109/262 (41%), Gaps = 36/262 (13%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M +G + Y +I K ++V AL + +M P I+ + +L+ +
Sbjct: 264 MSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKH 322
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
Y A L L + G+ PD++T N+ IN C + G ++A + + G P +T NT
Sbjct: 323 YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNT 382
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD--------------- 361
L++ LC ++ + ++ +G LN +Y+ +I+G+ GD
Sbjct: 383 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 442
Query: 362 --------------------IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ EA GL E KG+ + I G C G +++A+
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI 502
Query: 402 ELLKQMADKDVSPGARVWEALL 423
LL +M K ++P R + L+
Sbjct: 503 GLLNEMVLKTINPDVRTYTILV 524
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 111/225 (49%), Gaps = 2/225 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + N M G D T +++++ C+ + + DE L +EM + V Y+++
Sbjct: 571 AQHVFNAMSLMGVTPDVHTYTILINGFCKSKMV--DEALNLFKEMHQKNMVPDTVTYSSL 628
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K ++ ++++M+ G D++ Y +++G+ KA LF+++ G+
Sbjct: 629 VDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGI 688
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +T+ + ++GLCK ++ ++ + G DV YN ++ CK L
Sbjct: 689 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALT 748
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++ +M+ G + N T+ I+I+ L K + +A LL + + +GL
Sbjct: 749 MLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 117/255 (45%), Gaps = 2/255 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
++ +L ++ G+ D T + ++ +C + + E L F ++ GF V Y +
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVK--EALHFHDKLLAQGFQLNQVSYATL 104
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + A+ L ++ KP++ Y +++ + + +A LF E+ V G+
Sbjct: 105 INGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGI 164
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+V TY+ I G C ++ + ++ M P+V TYN L+ ALCK ++ +
Sbjct: 165 SANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKS 224
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ M + N+ TYS ++DG ++ +A + G+ ++ I G C
Sbjct: 225 VLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFC 284
Query: 393 QRGLVRKALELLKQM 407
+ V KAL L K+M
Sbjct: 285 KIKRVDKALNLFKEM 299
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 177/381 (46%), Gaps = 62/381 (16%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
YH +++ L+E +S +++ I +E + E + + +IKTY ++++F ++
Sbjct: 46 YHHILRRLSETRMVNHVSRIVELIRSQE-CKCDEDVALSVIKTYGKNSMPDQALDVFKRM 104
Query: 143 PKFRINRVGFAIEILNCMIND--------------------GFCVDGKTCSLILSSVCEQ 182
+ I AI N ++N G + +T ++++ C++
Sbjct: 105 RE--IFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKK 162
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
++ ++ GF+ M K GF + Y+ VI L K K+ DAL + ++M G+ PD+
Sbjct: 163 KEF--EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT 220
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELL---------------VLGLV-------------- 273
CY ++++G + ++D+ A EL+D LL + GL
Sbjct: 221 CYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWER 280
Query: 274 -------PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
D+YTY+ I+GLC NV+ + ++E + DV+TYNT+L C+ +
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK 340
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ EL + M+ K V N+ +Y+I+I GL G I EA + KG + +
Sbjct: 341 IKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGI 399
Query: 387 TICGLCQRGLVRKALELLKQM 407
I GLC G V KAL +++++
Sbjct: 400 FIHGLCVNGYVNKALGVMQEV 420
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 131/280 (46%), Gaps = 2/280 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A+ ++ + + G +D + I+ +C+++ L +E V+EM K G
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL--EEASNLVKEMSKHGVELNSHVC 467
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L++ ++ +A L +M +G +P +V Y +++ G+ + +A E+L
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G PD+ TY++ + GLC+ ++ +++ + G + DV+ +N L+ LC V +L+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
++ M+ + NL TY+ +++G GD A + GL ++ +
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
GLC V A+E + + P W L+ + V++
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 167/418 (39%), Gaps = 55/418 (13%)
Query: 58 PKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF 117
KQ + SL F P + Y+ +IK + +F LD + K E F+ F
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK-EGFKPDVF 185
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPK---------FRINRVGF--------AIEILNCM 160
+ +I A A + D++ LF ++ + + I GF A+E+ + +
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 161 INDGFCV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
+ D + KT ++++S + + + D+ L + MK+ + Y+++I L
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRV--DDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF--------------- 264
V A + N++ D+V Y +L G ++ EL+
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 265 ------------DELLVL-------GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
DE ++ G D TY ++I+GLC V + ++ +E
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G DV Y +++ LCK + L LVKEM G+ LN + +I GL + EA
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E G ++ ICGLC+ G +A +K+M + P + + LL
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 159/375 (42%), Gaps = 26/375 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S+Y P + ++ +I L++ + D + + +++ E E + + LI
Sbjct: 245 LLEDSSVY---PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER-EKDLYTYSSLIHGL 300
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC-SLILSSVCEQRDL 185
DA + ++F ++ + + + N M+ GFC GK SL L + E ++
Sbjct: 301 CDAGNVDKAESVFNELDE---RKASIDVVTYNTMLG-GFCRCGKIKESLELWRIMEHKNS 356
Query: 186 SS-----------------DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
+ DE + M G+ Y I L V ALG+
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+ +++S G D+ Y +++ + ++ +A L E+ G+ + + N I GL +
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ + + M + G +P V++YN L+ LCK + VKEM G +L+T
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
YSI++ GL I A L + L GL T M + I GLC G + A+ ++ M
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 409 DKDVSPGARVWEALL 423
++ + + L+
Sbjct: 597 HRNCTANLVTYNTLM 611
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 157/340 (46%), Gaps = 29/340 (8%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF----------------------YKIP 143
+E + N + ++F LI Y ++ +D++ + K+
Sbjct: 58 LETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLK 117
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
F++ GF EIL C G+ ++++ C+ D+ + + K G
Sbjct: 118 YFKL-VWGFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLR 170
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y ++ ++ + + + + M + G PD+ Y++++NG+ + A EL
Sbjct: 171 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANEL 230
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
FDE+LV GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 231 FDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 290
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+L + +L+ EM KG+ + TY+ +IDG +GD+ A + + + +
Sbjct: 291 KGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVA 350
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLCQ G A ++L++M + P A + ++
Sbjct: 351 YTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMII 390
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 4/227 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCF 204
R+ + + + M+ G D T S++++ +C++ + ++EL EM G
Sbjct: 185 RLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELF---DEMLVKGLVP 241
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L
Sbjct: 242 NXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLI 301
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+ GL PD +TY I+G CK+ +++ M + + D + Y L+ LC+
Sbjct: 302 DEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQE 361
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
++++EM G+ + TY+++I+ KGD+ + LL+E
Sbjct: 362 GRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKE 408
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++++ M G D T + ++ C++ DL D + M + V YT +
Sbjct: 297 AHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDL--DTAFXHRKRMIQENIRLDDVAYTAL 354
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
I L ++ + DA +L +M S G+ PD YTM++N + D K +L E+
Sbjct: 355 ISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 139/281 (49%), Gaps = 7/281 (2%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
D H + VN K K + A+ ++ + +G T + +L+ +C+ L
Sbjct: 258 DIHTYTAIVNWLAKNKKIQ-----EAVALMEKITANGCTPTIATYNALLNGLCKMGRL-- 310
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E + ++++ G +V YT++I L K+++ F+A + +M S G+ D VCYT +
Sbjct: 311 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTAL 370
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G++ +A ++ + G VPDV T + I+GL K + A +++ ME G
Sbjct: 371 IRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 430
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P+ + Y+ L+ LCK R+++ E++ +MK + TY+I+IDGL GD+ A
Sbjct: 431 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 490
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
+E L G ++ I GLC+ G A +L M+
Sbjct: 491 FFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMS 531
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 9/266 (3%)
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQ--EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
KT +L+L +C+ S ++L + E + ++ +I LVK + A
Sbjct: 191 KTHNLVLHGLCK-----SGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHS 245
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ + ++G DI YT ++N + + +A L +++ G P + TYN +NGLC
Sbjct: 246 LAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLC 305
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K +E I ++ + + G PDV+TY +L+ L K + +L KEM +G+ L+
Sbjct: 306 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTV 365
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y+ +I GL G I +A + + + G I GL + G + A+ + K M
Sbjct: 366 CYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 425
Query: 408 ADKDVSPGARVWEALL--LSSVSKLD 431
+ ++P V+ AL+ L K+D
Sbjct: 426 EARGLAPNEVVYSALIHGLCKARKMD 451
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 119/258 (46%), Gaps = 2/258 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
QE G + YT ++ L K +K+ +A+ ++ ++ ++G P I Y +LNG+
Sbjct: 246 LAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLC 305
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A +L +++ G PDV TY I+GL K+ K+ M G D +
Sbjct: 306 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTV 365
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y L++ L + ++ + + K M G V ++ T S MIDGL+ G I A + +
Sbjct: 366 CYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 425
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+GL ++ I GLC+ + ALE+L QM +P + +L+ + K
Sbjct: 426 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN-ILIDGLCKSGD 484
Query: 433 VNTSFIRLVDQILNTPCK 450
V + D++L CK
Sbjct: 485 VEAARA-FFDEMLEAGCK 501
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ AI++L ++++G D T + ++ + +++ S E +EM G
Sbjct: 306 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK--RSFEAYKLFKEMASRGLALD 363
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT +IR L++ K+ A + M S G PD+V + +++G+ A +F
Sbjct: 364 TVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 423
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ GL P+ Y+ I+GLCK ++ ++M+A M++ PD ITYN L+ LCK
Sbjct: 424 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 483
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMI------------------------------DG 355
++ R EM G ++ TY+I+I DG
Sbjct: 484 DVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDG 543
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
L G + C L E G+ S I LC+ V +A+ L +
Sbjct: 544 LCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAI 594
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 120/259 (46%), Gaps = 19/259 (7%)
Query: 182 QRDLSSDELLGFVQEMK---------------KLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
+R++S+D ++ Q +K + GF + ++ + ++ +A
Sbjct: 80 RREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAG 139
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV-LGLVPDVYTYNVYING 285
+L + +PD+ + +++ G + + +A + E+ G+ P + T+N+ ++G
Sbjct: 140 NLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHG 199
Query: 286 LCKQNNVEAGIKMIACMEELGSKP-DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
LCK V A + + S P T++ L+ L K + + L +E G +
Sbjct: 200 LCKSGKVLAAMDHFEAVRR--SMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTI 257
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
++ TY+ +++ LA I EA L+E+ G + ++ + GLC+ G + +A++LL
Sbjct: 258 DIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 317
Query: 405 KQMADKDVSPGARVWEALL 423
+++ D +P + +L+
Sbjct: 318 RKIVDNGCTPDVVTYTSLI 336
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 122/309 (39%), Gaps = 34/309 (11%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
Q +IP+ SS+ + + + C P +I L++ + + +E R
Sbjct: 376 QTGKIPQA----SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR-GL 430
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIE 155
E ++ LI A + ++ + ++ K + V A
Sbjct: 431 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 490
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ M+ G D T ++++S +C+ + +D G + +M F Y++++
Sbjct: 491 FFDEMLEAGCKPDVYTYNILISGLCKAGN--TDAACGVLDDMSSSRFV-----YSSLVDG 543
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV-KAEELFDELLVLGLVP 274
L K K+ + ++M+ G+ ++ + + + + V +A LF+ + G+ P
Sbjct: 544 LCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFH--LCKANRVDEAVSLFNAIRKEGM-P 600
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
Y YN I+ L K V G + M KPD +TYN LL + ++R
Sbjct: 601 HPYAYNSIISALIKSGKVNEGQAVYQEMTRWW-KPDRVTYNALLNGMIGANRMDRAHYYY 659
Query: 335 KEMKWKGIV 343
EM +G V
Sbjct: 660 LEMTGRGYV 668
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 82/202 (40%), Gaps = 29/202 (14%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C+P Y+ +I L + VLD + + F++ L+ + + +
Sbjct: 499 GCKPDVYTYNILISGLCKAGNTDAACGVLD------DMSSSRFVYSSLVDGLCKSGKLEG 552
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
LF+++ R G A + +T + ++ +C+ + DE +
Sbjct: 553 GCMLFHEM-----ERSGVA--------------NSQTRTRLIFHLCKANRV--DEAVSLF 591
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++K G Y ++I +L+K KV + + +M + KPD V Y +LNG+I
Sbjct: 592 NAIRKEGMPHPYA-YNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGA 649
Query: 255 EDYVKAEELFDELLVLGLVPDV 276
+A + E+ G VP V
Sbjct: 650 NRMDRAHYYYLEMTGRGYVPPV 671
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 138/261 (52%), Gaps = 2/261 (0%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
F+ E+ + G + T ++++ C D +++E L + +M + G C V Y
Sbjct: 194 FSREVFQDAVKLGVQPNVNTFNILIHGYCS--DNNTEEALRLINQMGEYGCCPDNVTYNT 251
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ +L K+ ++ +L QMK+ G+ P+ Y ++++G + +A E+ + + G
Sbjct: 252 VLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKG 311
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
++PDV+TYN + GLC + ++ +++ ME PDV+TYNTL+ + R +
Sbjct: 312 MLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAF 371
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+LV+EMK +G+ N T++IMI ++G I EA ++ + + G ++ I G
Sbjct: 372 KLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGY 431
Query: 392 CQRGLVRKALELLKQMADKDV 412
C+ G + +A +++ +M K +
Sbjct: 432 CKAGKMAEAYKMMDEMGRKGL 452
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 108/199 (54%), Gaps = 3/199 (1%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVI---VQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
I N+MK +P+++ +LN ++ V + E+F + + LG+ P+V T+N+ I+
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G C NN E +++I M E G PD +TYNT+L ALCK +L ++R+L+ +MK G+
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFP 279
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N TY+I++ G + EA ++E KG+ ++ + GLC G + +A+ L
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339
Query: 405 KQMADKDVSPGARVWEALL 423
+M + P + L+
Sbjct: 340 DKMESFKLVPDVVTYNTLI 358
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 20/281 (7%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
+D +D L +EMK+ G ++ Y +IR L K A+ LN++ G+ PD
Sbjct: 503 KDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDES 562
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
++++G + KA + ++++ L PD++T N+ + GLC++ +E G+ +
Sbjct: 563 TSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTW 622
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G D +TYN ++ + CK R L +L+ EM+ K + + TY+ ++ GL G
Sbjct: 623 ISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRT 682
Query: 363 IEACGLLEEALNKG-----------LCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
EA L + KG L T M+ E I LC +G + A++L +Q K
Sbjct: 683 EEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKG 742
Query: 412 VSPGARVWEALL---------LSSVSKLDFVNTSFIRLVDQ 443
VS + L+ ++ S L F+ ++ I+ D+
Sbjct: 743 VSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQFFDR 783
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 2/247 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + ++ E R SD V+EMK G V + +I+ + K+ +A
Sbjct: 350 DVVTYNTLIDGCFEHR--GSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASN 407
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++ +M G PD Y ++NG +A ++ DE+ GL D +T N ++ +C
Sbjct: 408 VMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMC 467
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ ++ + + G D +TY TL+ K + +R +L +EMK GIV +
Sbjct: 468 LEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATII 527
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ +I GL G +A L E L KGL S + I G C G V KA + +M
Sbjct: 528 TYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM 587
Query: 408 ADKDVSP 414
+ + P
Sbjct: 588 VEHSLKP 594
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 119/253 (47%), Gaps = 2/253 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M N G + T ++++ C+ + L E ++ M G + Y ++R L +
Sbjct: 272 MKNSGLFPNRNTYNILVHGYCKLKWLK--EAAEVIELMTGKGMLPDVWTYNTMVRGLCDE 329
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A+ + ++M+S + PD+V Y +++G A +L +E+ G+ + T+
Sbjct: 330 GKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTH 389
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ I C + ++ ++ M E G PD TYNT++ CK ++ +++ EM
Sbjct: 390 NIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGR 449
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG+ L+ T + ++ + + + +A L +A +G + I G + +
Sbjct: 450 KGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADR 509
Query: 400 ALELLKQMADKDV 412
AL+L ++M + +
Sbjct: 510 ALKLWEEMKETGI 522
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 13/228 (5%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++ LN ++ G D T ++I+ C + + ++ F +M + + +
Sbjct: 545 AVDKLNELLEKGLVPDESTSNIIIHGYCWEGAV--EKAFQFHNKMVEHSLKPDIFTCNIL 602
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+R L ++ + L + N S G D V Y ++++ + A +L E+ L
Sbjct: 603 LRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG-------SKPDVIT----YNTLLQAL 321
PD YTYN + GL K E K+ E G + P++ T Y+ + +L
Sbjct: 663 EPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSL 722
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
C + +L ++ + KG+ LN TY ++DGL + LL
Sbjct: 723 CTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLL 770
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 131/251 (52%), Gaps = 4/251 (1%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M + GF +V Y+ +I L K KV +AL ++ +M G+ PD+ YT++++ +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A+ELF +++ G + YN INGLCK N+E K++ M G +PD ITYNT
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE--EALN 374
+L LC++ +++ ++ M +G ++ Y+ ++D L +G + EA GL + + +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDF 432
+ + ++ I G C+ +A++L K + K P + ++L L+ S +D
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 433 VNTSFIRLVDQ 443
F ++VD
Sbjct: 241 AEEMFKKMVDS 251
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 4/273 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ M++ G +G T S++LS C +++ L +EM + F ++ V
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMA--RCLELYEEMTEKRFSPDVLLCNAV 298
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K +KV DA +L +M G PD+V Y ++L+G+ KA ELF ++ G
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ +Y+V +NGLCK N V + M E PDV+T+N L+ LCK +L+ ++
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 418
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ M ++ + T + ++ GL EA L + + KG + + GLC
Sbjct: 419 LLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLC 478
Query: 393 QRGLVRKALELLKQM--ADKDVSPGARVWEALL 423
+ G + +AL K M +D + SP + L+
Sbjct: 479 REGKLAQALLFFKSMVKSDGEFSPDVVTYTTLV 511
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M GF D T S I+S +C+ ++ E L V+EM + G + YT ++ L +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVT--EALEMVEEMTEKGVNPDVATYTIIVDRLCRA 58
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
KV +A + ++M G + V Y ++NG+ E+ +A +L +E+ G PD TY
Sbjct: 59 GKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK--EM 337
N ++GLC+ V + M G PDV+ YN LL AL K ++ L K +M
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ + +L TY+ +IDG EA L ++ + KG + ++ + GL ++ +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
+A E+ K+M D +P + +L
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVL 264
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 156/357 (43%), Gaps = 19/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + EP Y+ ++ L + + D + R + + L+
Sbjct: 102 LLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR-GYSPDVVAYNGLLDAL 160
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ ++ LF K +V + N +I DGFC R
Sbjct: 161 YKEGKVAEAWGLF-KTMDMADRKVAPDLITYNTLI-DGFC----------------RVEK 202
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+DE + +++ G+ V Y +++ L +K + +A + +M G P+ Y++
Sbjct: 203 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSI 262
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
VL+G + + EL++E+ PDV N I+ LCK V+ K++ M ++G
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIG 322
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+ PDV+TYN LL LCK +++ EL M G ++ +YS++++GL + +A
Sbjct: 323 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 382
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + + + L F+ + GLC+ G + +A +LL M++ +V P L+
Sbjct: 383 VLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLM 439
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 41/318 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L M + G+ D T + ILS +C +S E F M G+ +V Y +
Sbjct: 99 AYKLLEEMASKGYEPDNITYNTILSGLCRMGKVS--EAKQFFDSMPSRGYSPDVVAYNGL 156
Query: 213 IRSLVKKEKVFDALGILN--QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+ +L K+ KV +A G+ M + PD++ Y +++G E +A +LF +++
Sbjct: 157 LDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAK 216
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G +PD TYN + GL +++N++ +M M + G P+ TY+ +L C+V + R
Sbjct: 217 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARC 276
Query: 331 RELVKEMKWK-----------------------------------GIVLNLQTYSIMIDG 355
EL +EM K G V ++ TY+I++DG
Sbjct: 277 LELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDG 336
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L + +A L ++ G + + GLC+ V A L +M ++ + P
Sbjct: 337 LCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 396
Query: 416 ARVWEALL--LSSVSKLD 431
+ L+ L KLD
Sbjct: 397 VVTFNILMDGLCKAGKLD 414
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 142/327 (43%), Gaps = 32/327 (9%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF--------IFIDLI--- 123
C P Y V+ S C + ++ +E E F ID++
Sbjct: 252 GCAPNGATYSIVL------SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKA 305
Query: 124 KTYADAHRFQDSVNLFYKIPKF-----------RINRVGFAIEILNCMINDGFCVDGKTC 172
K DAH+ + ++ +P + N V A E+ + M+++G D +
Sbjct: 306 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 365
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S++L+ +C+ + +L M + +V + ++ L K K+ +A +L+ M
Sbjct: 366 SVVLNGLCKTNKVHDARVL--FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVM 423
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ PD V T +++G+ + +A LF ++ G V DV +N+ + GLC++ +
Sbjct: 424 SEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKL 483
Query: 293 EAGIKMIACMEELGSK--PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ M + + PDV+TY TL+ AL + +++ + ++M G + Y+
Sbjct: 484 AQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYN 543
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGL 377
+++GL +G I+A L + KG
Sbjct: 544 TLMNGLRKQGRHIQADRLTQAMKEKGF 570
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG-FCF 204
R R A+ + M+ G D +++L+ +C + L+ LL F +K G F
Sbjct: 444 RDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQ-ALLFFKSMVKSDGEFSP 502
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V YT ++ +L++ +V A+ QM G PD V Y ++NG+ Q +++A+ L
Sbjct: 503 DVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLT 562
Query: 265 DELLVLGLVPDVY 277
+ G + D +
Sbjct: 563 QAMKEKGFLSDCF 575
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 140/280 (50%), Gaps = 4/280 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFC 203
R ++ A + + M+ G T + ++S +C+ DL+ ++ L G M K G
Sbjct: 125 IRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGL---MAKAGIA 181
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ Y I+ L K ++ DA+ + +M G+ P+ V T +++ + D EL
Sbjct: 182 PDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLEL 241
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E+ G+ D+ YN +NG C+ +++A ++ M + G KPD +TY TL+ CK
Sbjct: 242 RWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCK 301
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
EL+ E+ +EM +G+ L+ TY+ +I GL+ G ++A +L E + GL ++
Sbjct: 302 EGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTT 361
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I C+ G V+ + LK+M +K +PG + ++
Sbjct: 362 YTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVM 401
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++R +++ K+ A + ++M G++P +V + +++G+ D A L +
Sbjct: 117 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 176
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ PDVYTY +I GLCK ++ ++M M E G P+ + TL+ A CK ++
Sbjct: 177 KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVT 236
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL EM +G+ +L Y+ +++G D+ A ++EE GL + I
Sbjct: 237 AGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLI 296
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G C+ G + A+E+ ++M+D+ V+ + A L+S +SK
Sbjct: 297 DGCCKEGELDTAMEMKQEMSDEGVALDDVTYTA-LISGLSK 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 161/368 (43%), Gaps = 25/368 (6%)
Query: 55 QQIPKQPHILSSLLHSFSIYNCEPPPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENF 112
++P P + LH + + PPEA F +++ + + + +V D + +R
Sbjct: 90 NRLPSVPEAYAFYLH---LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRR-GV 145
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNL------------FYKIPKF-----RINRVGFAIE 155
+ F L+ A ++ L Y F + R+ A+E
Sbjct: 146 QPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAME 205
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ M G + + ++ + C++ D+++ L EM G +V Y ++
Sbjct: 206 MFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAG--LELRWEMATRGVKADLVAYNALVNG 263
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ + A I+ +M+ DG+KPD V YT +++G + + A E+ E+ G+ D
Sbjct: 264 FCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALD 323
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TY I+GL K +++ M E G +PD TY ++ A CK ++ + +K
Sbjct: 324 DVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLK 383
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM+ KG + TY+++++G S G + A LL LN G+C ++ + G C+ G
Sbjct: 384 EMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHG 443
Query: 396 LVRKALEL 403
VR EL
Sbjct: 444 KVRDTEEL 451
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ P+ + M++ +I A +FDE+L G+ P V T+N ++G+CK +++
Sbjct: 109 GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNA 168
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ M + G PDV TY +Q LCK + E+ +EM +G+ N + +ID
Sbjct: 169 NALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDA 228
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+GD+ L E +G+ ++ + G C+ ++ A +++++M + P
Sbjct: 229 HCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPD 288
Query: 416 ARVWEALL 423
+ L+
Sbjct: 289 KVTYTTLI 296
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A + LL G+ P+ +N+ + + + + + + M G +P V+T+NTL+
Sbjct: 97 EAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLM 156
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
+CK +LN L M GI ++ TY I GL G I +A + EE +GL
Sbjct: 157 SGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLN 216
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + I C+ G V LEL +MA + V + AL+
Sbjct: 217 PNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALV 261
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 130/260 (50%), Gaps = 2/260 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ A+E+L M +D S+I+ +C +D S D EM+ GF ++
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLC--KDGSLDNAFNLFNEMEIKGFKADII 299
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + D +L M I P++V ++++++ + + +A++L E+
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G+ P+ TYN I+G CK+N +E I+M+ M G PD++T+N L+ CK +
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ EL +EM +G++ N TY+ ++ G G + A L +E +++ + +
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 388 ICGLCQRGLVRKALELLKQM 407
+ GLC G + KALE+ ++
Sbjct: 480 LDGLCDNGELEKALEIFGKI 499
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 6/256 (2%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+L ++M+ G + + +I + K+ A + ++ G +PD V + +LN
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ ++ +A EL D ++ +G P + T N +NGLC V + +I M E G +P
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
+ +TY +L +CK + EL+++M+ + I L+ YSI+IDGL G + A L
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
E KG ++ I G C G +LL+ M + +SP + L+ S
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS---- 342
Query: 430 LDFVNTSFIRLVDQIL 445
FV +R DQ+L
Sbjct: 343 --FVKEGKLREADQLL 356
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 168/374 (44%), Gaps = 25/374 (6%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIF 119
Q + LL N + Y +I L ++ + ++ + +E + F+ +
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIITY 301
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILS 177
LI + +A R+ D L + K +I N V F++ I D F +GK
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI------DSFVKEGKL------ 349
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+D+LL +EM + G + Y ++I K+ ++ +A+ +++ M S G
Sbjct: 350 -------READQLL---KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PDI+ + +++NG ELF E+ + G++ + TYN + G C+ +E K
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M +PD+++Y LL LC EL + E+ +++ + L++ Y I+I G+
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ + +A L KG+ + ++ I LC++ + KA L ++M ++ +P
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 418 VWEALLLSSVSKLD 431
+ L+ + + D
Sbjct: 580 TYNILIRAHLGDDD 593
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ +A + ++ G+ D + +L+ +C + +S E L V M ++G
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS--EALELVDRMVEMGHKPT 192
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ ++ L KV DA+ ++++M G +P+ V Y VLN + A EL
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + D Y++ I+GLCK +++ + ME G K D+ITYNTL+ C
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +L+++M + I N+ T+S++ID +G + EA LL+E + +G+ + ++
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ + +A++++ M K P + L+
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 136/275 (49%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A+E+++ M+ G T + +++ +C +S +L + M + GF V
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL--IDRMVETGFQPNEVT 230
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y V+ + K + A+ +L +M+ IK D V Y+++++G+ A LF+E+
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ G D+ TYN I G C + G K++ M + P+V+T++ L+ + K +L
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L+KEM +GI N TY+ +IDG + + EA +++ ++KG F+ I
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ + LEL ++M+ + V + L+
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 2/257 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ AI++++ MI+ G D T +++++ C+ + D+ L +EM G V
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI--DDGLELFREMSLRGVIANTV 439
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +++ + K+ A + +M S ++PDIV Y ++L+G+ + KA E+F ++
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ D+ Y + I+G+C + V+ + + G K D YN ++ LC+ L
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++ L ++M +G + TY+I+I D A L+EE + G S
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 388 ICGLCQRGLVRKALELL 404
I L L + L++L
Sbjct: 620 INMLSSGELDKSFLDML 636
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 95/210 (45%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y + + S + K DA+ + M P ++ + + + + + Y L +
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ +YT ++ IN C+ + + + +LG +PD + +NTLL LC
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ ELV M G L T + +++GL G + +A L++ + G +
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +C+ G A+ELL++M ++++ A
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDA 263
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 175/388 (45%), Gaps = 22/388 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIK 124
++ Y+CEP +Y+ ++ L ++ F V ++ R+ TP+ + F +K
Sbjct: 97 NVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKV--YMRMRDRGITPDVYSFTIRMK 154
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCV 167
++ R ++ L + +N V + E+ M+ G +
Sbjct: 155 SFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSL 214
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
T + +L +C++ D+ E L + ++ K G + Y I+ L +K ++ A+
Sbjct: 215 CLSTFNKLLHVLCKKGDVKECEKL--LDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVR 272
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++ ++ G KPD+V Y ++ G+ + +AE +L+ GL PD +TYN I G C
Sbjct: 273 MVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYC 332
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K V+ +++ G PD TY +L+ LC E NR L E KGI N+
Sbjct: 333 KGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y+ +I GL+++G I+EA L E KGL + F+ + GLC+ G V A L+K M
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNT 435
K P + L+ ++L N
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENA 480
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 23/334 (6%)
Query: 78 PPPE--AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P+ Y+++I L +NS+F + L + E E F + LI Y Q
Sbjct: 282 PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKL-VNEGLEPDSFTYNTLIAGYCKGGMVQ-- 338
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
A IL + +GF D T ++ +C + + ++ L
Sbjct: 339 ----------------LAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE--TNRALALFN 380
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
E G ++ Y +I+ L + + +A + ++M G+ P++ + +++NG+
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A+ L ++ G PD++T+N+ I+G Q +E ++++ M + G PDV TYN
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYN 500
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+LL LCK + + E K M KG NL T++I+++ L + +A GLLEE NK
Sbjct: 501 SLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNK 560
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ + F I G C+ G + A L ++M +
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 175/394 (44%), Gaps = 54/394 (13%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I+ L +F + VL + + E +++ +K Y + Q++VN+F +
Sbjct: 42 TYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101
Query: 142 IPKFRINRVGFAIE-ILNCMINDGF----------------CVDGKTCSLILSSVCEQRD 184
+ + F+ I++ +++ G+ D + ++ + S C R
Sbjct: 102 MDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFC--RT 159
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L + M G +V Y V+ ++ + + +M + G+ + +
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTF 219
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+L+ + + D + E+L D+++ G++P+++TYN +I GLC++ ++A ++M+ + +
Sbjct: 220 NKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLID 279
Query: 305 LGSKPDVITYNTLLQALCKVRELNR----LRELVKE------------------------ 336
G KPDV+TYN L+ LCK + L +LV E
Sbjct: 280 QGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQL 339
Query: 337 -------MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ G V + TY +IDGL +G+ A L EAL KG+ +++ I
Sbjct: 340 AERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL +GL+ +A +L +M++K + P + + L+
Sbjct: 400 GLSNQGLILEAAQLASEMSEKGLIPEVQTFNILV 433
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 4/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++ +I+ G D T + ++ +C+ E+ ++ ++ G Y +
Sbjct: 270 AVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEV--YLGKLVNEGLEPDSFTYNTL 327
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K V A IL +G PD Y +++G+ + + +A LF+E L G+
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V YN I GL Q + ++ + M E G P+V T+N L+ LCK+ ++
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LVK M KG ++ T++I+I G +++ + A +L+ ++ G+ ++ + GLC
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLC 507
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ +E K M +K +P + LL L KLD
Sbjct: 508 KTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLD 548
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 5/237 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+EIL+ M+++G D T + +L+ +C+ ++++ + M + G + + +
Sbjct: 480 ALEILDVMMDNGVDPDVYTYNSLLNGLCKTS--KYEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ SL + K+ ALG+L +MK+ + PD V + +++G D A LF ++ + +
Sbjct: 538 LESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYM 597
Query: 273 VP-DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
V TYN+ I+ ++ NV K+ M + PD TY ++ CK ++
Sbjct: 598 VSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGY 657
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS--SMFDE 386
+ + EM G + +L T +I+ L + + EA G++ + KGL ++ ++FD
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTIFDH 714
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 126/303 (41%), Gaps = 44/303 (14%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + M G + +T +++++ +C+ +S + G V+ M G+ + + +
Sbjct: 410 AAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD--GLVKVMISKGYFPDIFTFNIL 467
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K+ +AL IL+ M +G+ PD+ Y +LNG+ Y E + ++ G
Sbjct: 468 IHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGC 527
Query: 273 VPDVYTYNVY-----------------------------------INGLCKQNNVEAGIK 297
P+++T+N+ I+G CK +++
Sbjct: 528 APNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 298 MIACMEELG----SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ MEE+ S P TYN ++ A + + +L +EM + + + TY +M+
Sbjct: 588 LFRKMEEVYMVSCSTP---TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DG G++ L E + G + I LC V +A ++ +M K +
Sbjct: 645 DGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Query: 414 PGA 416
P A
Sbjct: 705 PEA 707
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 141/261 (54%), Gaps = 5/261 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
G VD S+++ +VC + DL+ + ELL +EM++ G+ YT VI + VK+
Sbjct: 250 GLEVDAAAYSILVQAVCRRLDLNLACELL---KEMREFGWVPSKGTYTAVIVACVKQGNF 306
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+AL + ++M S G+ +++ ++ G V D A +LFDE++ G+VPDV ++V
Sbjct: 307 VEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVL 366
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
ING K ++E ++ M+ +G +P+V N+LL+ + L L E GI
Sbjct: 367 INGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI 426
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
N+ TY+I++ L G + EAC L E+ ++KG+ ++ I G C++G + KA
Sbjct: 427 T-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYS 485
Query: 403 LLKQMADKDVSPGARVWEALL 423
+LK + ++ + P A + L+
Sbjct: 486 MLKSILERGLKPNAVTYTLLI 506
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 7/294 (2%)
Query: 130 HRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE 189
H F +N K RV + LN I GF T + I+ ++ + S
Sbjct: 535 HTFNTVINGLGKT-----GRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDS-A 588
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
LL + +EM + G ++ YT++I L K K+ AL + + MK G+K D+V Y+ +++
Sbjct: 589 LLAY-REMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALID 647
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G D A + F ELL +GL P+ YN I+G NN+EA + + M +
Sbjct: 648 GFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPC 707
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
D+ Y +++ L K +L+ +L EM K IV ++ Y+++I+GL++ G + A +L
Sbjct: 708 DLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKIL 767
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+E + +++ I G + G +++A L +M DK + P ++ L+
Sbjct: 768 KEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 127/261 (48%), Gaps = 6/261 (2%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ D+L F+++ GF + Y ++I K+ V AL +M GI PD++ YT
Sbjct: 553 TQDKLNNFIKQ----GFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYT 608
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++G+ A E+ ++ G+ DV Y+ I+G CK +++E+ K + ++
Sbjct: 609 SLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDI 668
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P+ + YN+++ + + L +EM + +LQ Y+ +I GL +G + A
Sbjct: 669 GLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLA 728
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L E L+K + M+ I GL G + A ++LK+M +++P V+ L+
Sbjct: 729 LDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAG 788
Query: 426 SVSKLDFVNTSFIRLVDQILN 446
+ + + RL D++L+
Sbjct: 789 NFREGNLQEA--FRLHDEMLD 807
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 35/264 (13%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M G +V Y N+I KK + A +L + G+KP+ V YT++++G +
Sbjct: 453 EKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKK 512
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ----------NN------------- 291
D +A +F++++ + P +T+N INGL K NN
Sbjct: 513 GDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITY 572
Query: 292 ------------VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
V++ + M E G PDVITY +L+ LCK ++ E+ +MK+
Sbjct: 573 NSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKY 632
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG+ L++ YS +IDG D+ A E L+ GL + +++ I G +
Sbjct: 633 KGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEA 692
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL L ++M V +V+ +++
Sbjct: 693 ALNLHQEMIKNKVPCDLQVYTSII 716
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 104/215 (48%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +++S V+ K+ DA+ M + P + +L ++ + A +L+DE++
Sbjct: 153 FNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMV 212
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ D YT +V + K+ E K + G + D Y+ L+QA+C+ +LN
Sbjct: 213 ERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLN 272
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL+KEM+ G V + TY+ +I +G+ +EA L +E ++ GL + +
Sbjct: 273 LACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLM 332
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C G V AL+L ++ + V P ++ L+
Sbjct: 333 KGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLI 367
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-----DELL----------- 191
N++G A+E+ + M G +D S ++ C+ D+ S ELL
Sbjct: 618 NKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVY 677
Query: 192 -----GFV------------QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
GF+ QEM K + YT++I L+K+ K+ AL + ++M S
Sbjct: 678 NSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLS 737
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
I PDIV YT+++NG+ A ++ E+ + P V YN+ I G ++ N++
Sbjct: 738 KDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQE 797
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ M + G PD TY+ L+ KV
Sbjct: 798 AFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G D +N + + N + ++ M E P V N LL A+ + +
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
R+L EM +GI + T +++ +G E +EA +GL ++ + +
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
+C+R + A ELLK+M + P + A++++ V + +FV +RL D++++
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEA--LRLKDEMVSVGLP 322
Query: 451 M 451
M
Sbjct: 323 M 323
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILN 158
S+++D K + E+ F +L+ D ++V I F +N + A+ +
Sbjct: 643 SALIDGFCKMHDMESASKFFTELL----DIGLTPNTVVYNSMISGFIHLNNMEAALNLHQ 698
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
MI + D + + I+ + ++ LS L EM +V YT +I L
Sbjct: 699 EMIKNKVPCDLQVYTSIIGGLLKEGKLSL--ALDLYSEMLSKDIVPDIVMYTVLINGLSN 756
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
++ +A IL +M + I P ++ Y +++ G + + +A L DE+L GLVPD T
Sbjct: 757 NGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTT 816
Query: 279 YNVYINGLCKQNNVEAG 295
Y++ +NG K ++ G
Sbjct: 817 YDILVNGKLKVSHTLGG 833
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 136/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A +LFDE+LV
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
LVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 242 ALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 302 NDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P AR + ++
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 394
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 108/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDAN 232
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L EM K +V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 233 KLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A +L+ +M+ K + P + L+
Sbjct: 293 CKKGDLKQANDLIDEMSMKGLQPDKITYTTLI 324
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKM--DDANKLFDEMLVKALVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 247 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 307 EMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 367 RSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 169/355 (47%), Gaps = 9/355 (2%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYA---DAHRFQDSVN 137
E + ++ L + S+F S+L + + + P +F L+ +Y + R DS+
Sbjct: 77 ETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLFSYRMCDSSPRVFDSLF 136
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
Y +N+ A ++ + M + GF ++C+ LSS+ + + D L F +EM
Sbjct: 137 KTYA----HMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRV--DIALTFYREM 190
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
++ + V+ +L K K+ A+ +L +M+S GI P++V Y ++ G +
Sbjct: 191 RRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLL 250
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
A +L + + GL P+V T+N I+G CK+ + + + M+ + P+ +TYNTL
Sbjct: 251 SIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTL 310
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ +V N ++ +EM G+ ++ TY+ +I GL +G +A L++E + L
Sbjct: 311 INGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENL 370
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+S + I G C R +A +L K M P + ++ L + V DF
Sbjct: 371 VPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDF 425
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 158/361 (43%), Gaps = 20/361 (5%)
Query: 71 FSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAH 130
FS C+ P + + KT A ++F + + V ++ T E L + D H
Sbjct: 120 FSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYL-SSLLDFH 178
Query: 131 RFQDSVNLFYKIPKFRINRVGF-----------------AIEILNCMINDGFCVDGKTCS 173
R ++ + ++ + RI+ + A+E+L M + G + + +
Sbjct: 179 RVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYN 238
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+++ C + LS L + M K G +V + ++I K+ K+ +A ++MK
Sbjct: 239 TLIAGHCNKGLLSIATKLKNL--MGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMK 296
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
+ P+ V Y ++NG + A ++++E++ G+ D+ TYN I GLCK+ +
Sbjct: 297 VMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTK 356
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
++ +++ P+ TY+ L+ C + +R +L K M G N QT+ ++
Sbjct: 357 KAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLT 416
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
D A +L + + + + S+ E GLCQ G A++L +M + +
Sbjct: 417 SAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEMEARRLI 476
Query: 414 P 414
P
Sbjct: 477 P 477
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRJAQ--SVFDAITKWGLRPSVVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG + A ELFDE+LV
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ + I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 242 GLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG +GD+ A + + + + I G
Sbjct: 302 HHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC G A ++L++M + P AR + ++
Sbjct: 362 LCXEGRSVDAEKMLREMLSVGLKPDARTYTMII 394
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 172
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ CK + +
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDAN 232
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N ++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 233 ELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 292
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A L+ +M+ K + P + L+
Sbjct: 293 CKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 324
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 4/232 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCF 204
R+ + + + M+ G D T S++++ C E + ++EL EM G
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELF---DEMLVKGLVP 245
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A L
Sbjct: 246 NXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 305
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+ GL PD TY I+G CK+ +++ + M + + D + Y L+ LC
Sbjct: 306 DEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXE 365
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 366 GRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M++ D T + ++ +C++ DL L + EM G +
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL--IDEMSXKGLKPDKI 318
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + + D V YT +++G+ + V AE++ E+
Sbjct: 319 TYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREM 378
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L +GL PD TY + IN CK+ +V G K++ M+ G P V+TYN L+
Sbjct: 379 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I L KK + A ++++M G+KPD + YT +++G + D A E
Sbjct: 282 LITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXK 341
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ D Y I+GLC + KM+ M +G KPD TY ++ CK
Sbjct: 342 RMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 401
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ + +L+KEM+ G V ++ TY+++++G
Sbjct: 402 DVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 130/240 (54%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D DE G ++EM + G V Y +I + V A + ++M S GI+P V
Sbjct: 344 DCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVT 403
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT ++ + + +A++LF++++ G+ PD+ +N I+G C N++ M+ M+
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
++ PD +T+NTL+Q C+ ++ REL++EMK +GI + +Y+ +I G + +GD+
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A + +E L+ G ++ I GLC+ A +LLK+M K ++P + +L+
Sbjct: 524 DAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 129/248 (52%), Gaps = 2/248 (0%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM ++ +V + +I L K+ K+ A + M++ GIKP++V Y +++G +
Sbjct: 181 EMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRG 240
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A +FD + G+ PD YTY +I+G+CK+ +E M+ M+E+G +P +TYN
Sbjct: 241 RVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYN 300
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ C L + +M +G++ + TY+++I L + EA G+++E K
Sbjct: 301 TLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK 360
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFV 433
GL S ++ I G C+ G V+KA L +M K + P + +L+ LS ++
Sbjct: 361 GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQA 420
Query: 434 NTSFIRLV 441
+ F ++V
Sbjct: 421 DDLFEKIV 428
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 147/299 (49%), Gaps = 4/299 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A I + M G D T +S +C++ L +E G +++MK++G V
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKL--EEASGMLEKMKEIGLRPTAV 297
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I K + A ++M +G+ P + Y M+++ + + +A+ + E+
Sbjct: 298 TYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM 357
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GLVPD TYN+ ING C+ NV+ + M G +P +TY +L+ L K +
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ +L +++ KGI +L ++ +IDG + G++ A +L+E + F+
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTL 477
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ G C+ G V A EL+++M + + P + L+S SK + +F R+ D++L+
Sbjct: 478 MQGRCREGKVEAARELIEEMKSRGIKPDHISYNT-LISGYSKRGDMKDAF-RVRDEMLS 534
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 149/306 (48%), Gaps = 26/306 (8%)
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
D++ + ++R + + L+ ++ + RI ++ N MIN C +GK L
Sbjct: 161 DMLSLFLKSNRTEKAWVLYAEMFRMRIKS---SVVTFNIMINV-LCKEGK-----LKKAK 211
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
E F+ M+ LG +V Y +I + +V A I + MK G+KPD
Sbjct: 212 E-----------FIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPD 260
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
Y ++G+ + +A + +++ +GL P TYN I+G C + N+E
Sbjct: 261 SYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRD 320
Query: 301 CMEELGSKPDVITYNTLLQAL---CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M G P V TYN L+ AL CK+ E + ++KEM KG+V + TY+I+I+G
Sbjct: 321 KMVREGLMPTVSTYNMLIHALFLDCKMDEAD---GIIKEMSEKGLVPDSVTYNILINGYC 377
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G++ +A L +E ++KG+ + I L +RG +++A +L +++ K + P
Sbjct: 378 RCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI 437
Query: 418 VWEALL 423
++ AL+
Sbjct: 438 MFNALI 443
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +IR+ + ++ DA + MK G+ P + +L+ + KA L+ E+
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ + V T+N+ IN LCK+ ++ + I ME LG KP+V+TYNT++ C +
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R + MK +G+ + TY I G+ +G + EA G+LE+ GL + ++ I
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C +G + A + +M + + P + L+
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLI 338
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
I+ M G D T +++++ C ++ + EM G V YT++I
Sbjct: 353 IIKEMSEKGLVPDSVTYNILINGYCRCGNVK--KAFTLHDEMISKGIQPTRVTYTSLIYV 410
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K+ ++ A + ++ GI PD++ + +++G + +A + E+ + +VPD
Sbjct: 411 LSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPD 470
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+N + G C++ VEA ++I M+ G KPD I+YNTL+ K ++ +
Sbjct: 471 EVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRD 530
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EM G L TY+ +I GL + A LL+E ++KG+ + + I G+
Sbjct: 531 EMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+ LI + R + + +LF KI + I F I+ + DG C +G
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGI----FPDLIMFNALIDGHCANG--------- 450
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+ D ++EM ++ V + +++ ++ KV A ++ +MKS GIK
Sbjct: 451 -------NMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIK 503
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD + Y +++G + D A + DE+L +G P + TYN I GLCK + ++
Sbjct: 504 PDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQL 563
Query: 299 IACMEELGSKPDVITYNTLLQALCKV 324
+ M G P+ TY +L++ + V
Sbjct: 564 LKEMISKGITPNDNTYLSLIEGIGNV 589
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 117/221 (52%), Gaps = 2/221 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
++ +I +L K+ K +A I + M G+ P++ Y +++NG+ + +A L E+L
Sbjct: 223 FSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREML 280
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+VPD TYN I+GLCK + + + ++ M G DV+TY +LL ALCK + L+
Sbjct: 281 HKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLD 340
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ L +MK +GI + TY+ +IDGL G + A L + L KG C + I
Sbjct: 341 KATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMI 400
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
GLC+ G+ +AL + +M D P A +E ++ S K
Sbjct: 401 SGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 441
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 144/300 (48%), Gaps = 6/300 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ ++ F+ +L ++ G+ + T + ++ +C + ++ +LL F ++ F
Sbjct: 57 HLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVK--KLLHFHDKVVAQAFQTN 114
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ L K + A+ +L ++ +P++V Y+ +++G+ + +A +L+
Sbjct: 115 QVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYS 174
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + P+V TYN I C + ++ M PDV T++ L+ ALCK
Sbjct: 175 EMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCK-- 232
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E +++ M G+ N+ +Y+IMI+GL + EA LL E L+K + + ++
Sbjct: 233 EGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYN 292
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
I GLC+ G + AL L+ +M + + +LL L LD F+++ ++
Sbjct: 293 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 352
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 146/337 (43%), Gaps = 25/337 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDS 135
P Y +I L ++ + + ++ RE F P I + LI + A + +
Sbjct: 147 RPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIF--PNVITYNTLICAFCLAGQLMGA 204
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+L +++ IN + IL D C +GK I +
Sbjct: 205 FSLLHEMILKNINPDVYTFSILI----DALCKEGKNAKQIFHA----------------- 243
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
M ++G + Y +I L K ++V +A+ +L +M + PD V Y +++G+
Sbjct: 244 -MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 302
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A L +E+ G DV TY ++ LCK N++ + M+E G +P + TY
Sbjct: 303 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 362
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ LCK L +EL + + KG +++ TY++MI GL +G EA + + +
Sbjct: 363 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 422
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G + F+ I L ++ KA +LL +M K +
Sbjct: 423 GCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 107/195 (54%), Gaps = 2/195 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A+ +L M++ D T + ++ +C+ ++S L + EM G +V
Sbjct: 268 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA--LNLMNEMHHRGQPADVVT 325
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT+++ +L K + + A + +MK GI+P + YT +++G+ A+ELF LL
Sbjct: 326 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 385
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
V G DV+TY V I+GLCK+ + + + + ME+ G P+ +T+ ++++L + E +
Sbjct: 386 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 445
Query: 329 RLRELVKEMKWKGIV 343
+ +L+ EM KG++
Sbjct: 446 KAEKLLHEMIAKGLL 460
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 107/253 (42%), Gaps = 37/253 (14%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK--------------------------- 238
++++ ++ SLVK + + + QM GI+
Sbjct: 10 IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69
Query: 239 --------PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
P+ + +T ++ G+ ++ + K D+++ + +Y +NGLCK
Sbjct: 70 KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
IK++ +E+ ++P+V+ Y+ ++ LCK + +N +L EM + I N+ TY+
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I G ++ A LL E + K + F I LC+ G + A ++ M
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQM 247
Query: 411 DVSPGARVWEALL 423
V+P + ++
Sbjct: 248 GVNPNVYSYNIMI 260
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M+ G + +++T + L+ C + ++ L+ ++ G N T++ ++ GL KG+
Sbjct: 36 MDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGE 95
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ + ++ + + T + + GLC+ G R A++LL+ + D+ P ++ A
Sbjct: 96 VKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSA 155
Query: 422 LLLSSVSKLDFVNTSF 437
++ + K VN ++
Sbjct: 156 -IIDGLCKDKLVNEAY 170
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 130/240 (54%), Gaps = 4/240 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ +C R +DE + ++ M+ G +V Y +IR L ++ AL +L +M
Sbjct: 119 TMVMRGLCASR--RTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEM 176
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G+ P+++ Y+ +L G + ++F+E+ LG+ PDV + +I+ LCK+ +
Sbjct: 177 CGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRI 236
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+K+ M + G +P+V+TYN L+ LCK + L EM KG+ ++ TY+ +
Sbjct: 237 GKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTL 296
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSM--FDETICGLCQRGLVRKALELLKQMADK 410
I GL+ ++ A GLLEE + + + F+ I GLC+ G +R+A+ + + MA++
Sbjct: 297 IAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAER 356
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 121/247 (48%), Gaps = 4/247 (1%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG---MVDYTNVIRSLVKKEKVFD 224
D + +++L+++C +R + L + +M + V YT V+R L + +
Sbjct: 75 DAVSYNIVLAALC-RRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDE 133
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A+ +L M++ G++ D+V Y ++ G+ + A EL E+ G+ P+V Y+ +
Sbjct: 134 AVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLR 193
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G C+ + K+ M LG +PDVI + + LCK + + ++ M +G+
Sbjct: 194 GYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEP 253
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ TY+++I+ L +G + EA L E +KG+ ++ I GL + A+ LL
Sbjct: 254 NVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLL 313
Query: 405 KQMADKD 411
++M D
Sbjct: 314 EEMIQGD 320
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 114/231 (49%), Gaps = 6/231 (2%)
Query: 207 VDYTNVIRSLVKKE-KVFDALGILNQMKSDG---IKPDIVCYTMVLNGVIVQEDYVKAEE 262
V Y V+ +L ++ + AL +L M + +P+ V YTMV+ G+ +A
Sbjct: 77 VSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVA 136
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
L + G+ DV TY I GLC ++ ++++ M G P+VI Y+ LL+ C
Sbjct: 137 LLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYC 196
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ + ++ +EM G+ ++ ++ ID L KG I +A + + + +GL
Sbjct: 197 RSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVV 256
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
++ I LC+ G VR+AL L +M DK V+P + L+ LS V ++D
Sbjct: 257 TYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMD 307
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 160/361 (44%), Gaps = 57/361 (15%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNC 159
++ L++ Y + R+QD +F ++ + + R+G A+++ +
Sbjct: 186 IVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDI 245
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G + T +++++ +C++ S E L EM G +V Y +I L
Sbjct: 246 MVQRGLEPNVVTYNVLINCLCKEG--SVREALALRNEMDDKGVAPDVVTYNTLIAGLSGV 303
Query: 220 EKVFDALGILNQM-KSDG-IKPDIVCYTMVLNGV------------------------IV 253
++ A+G+L +M + D ++PD+V + V++G+ +V
Sbjct: 304 LEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLV 363
Query: 254 QEDYV-----------KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+Y+ A L EL+ GL PD +TY++ ING K V+ + M
Sbjct: 364 TYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTM 423
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+ G + ++ Y LL ALC++ + + L EM L+ YS M+ G GDI
Sbjct: 424 TQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYSTMMYGACKSGDI 482
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A LL++ L++GL + + I + G + +A +LKQMA P V+++L
Sbjct: 483 KAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSL 542
Query: 423 L 423
+
Sbjct: 543 I 543
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 4/262 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L M G + S +L C R ++ +EM +LG ++ +T
Sbjct: 169 ALELLGEMCGSGVHPNVIVYSCLLRGYC--RSGRWQDVSKVFEEMSRLGVEPDVIMFTGF 226
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK ++ A+ + + M G++P++V Y +++N + + +A L +E+ G+
Sbjct: 227 IDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGV 286
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS--KPDVITYNTLLQALCKVRELNRL 330
PDV TYN I GL ++ + ++ M + + +PDV+T+N+++ LCK+ + +
Sbjct: 287 APDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQA 346
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ + M +G + NL TY+ +I G + A L+ E ++ GL S + I G
Sbjct: 347 ISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILING 406
Query: 391 LCQRGLVRKALELLKQMADKDV 412
+ V +A L+ M + +
Sbjct: 407 FSKLWEVDRAEMFLRTMTQRGI 428
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 110/208 (52%), Gaps = 6/208 (2%)
Query: 140 YKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
Y I F R+++V A+ +++ +I+ G D T S++++ + ++ E+ F++ M
Sbjct: 367 YLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEM--FLRTMT 424
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDY 257
+ G + Y ++ +L + + A+ + N+M + G+ D V Y+ ++ G D
Sbjct: 425 QRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDI 482
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
A++L ++L GL PD TY++ IN K ++E +++ M G PDV +++L
Sbjct: 483 KAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSL 542
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLN 345
++ ++N++ +L+ EM+ K + ++
Sbjct: 543 IKGYSAEGQINKILDLIHEMRAKNVAID 570
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 305 LGSKPDV---ITYNTLLQALCKV-RELNRLRELVKEMKWK---GIVLNLQTYSIMIDGLA 357
L + PDV ++YN +L ALC+ +L + L+ +M + N +Y++++ GL
Sbjct: 67 LSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLC 126
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ EA LL G+ + I GLC + ALELL +M V P
Sbjct: 127 ASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVI 186
Query: 418 VWEALL 423
V+ LL
Sbjct: 187 VYSCLL 192
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 118/218 (54%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ L K V DALG+L M G+ PD++ + VL+G+ ++ + A +F
Sbjct: 473 LVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFK 532
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L G P+V TY+ I+GL K ++ ++++A M ELG + + +TY+T++ L KV
Sbjct: 533 RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVG 592
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++++M+ G + + TY+ +IDG + + EA GLL E L G +
Sbjct: 593 RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 652
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G +A+E+L MA + +P A + +++
Sbjct: 653 TLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 690
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 1/246 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE L + +M +LG V Y+ V+ L+K ++ DA+ +L QM+ G PD V Y +
Sbjct: 560 DEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTL 619
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G ++ +A L E+L G P V TY +GLC+ + ++++ M G
Sbjct: 620 IDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGC 679
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL-NLQTYSIMIDGLASKGDIIEAC 366
P+ ITY++++ LCK + ++M +V ++ YS +IDGL G I EA
Sbjct: 680 APNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAY 739
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
LE + G F I GLC G + LEL MA++ + A++ +
Sbjct: 740 EFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAY 799
Query: 427 VSKLDF 432
K +F
Sbjct: 800 CLKGEF 805
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 144/319 (45%), Gaps = 10/319 (3%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILN 158
S+V+D + K E + +++ DA D+V I F + R+ A+ +L
Sbjct: 582 STVVDGLLKVGRMEDA----VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M+ GF T + + +C R DE + + M G + Y++++ L K
Sbjct: 638 EMLEAGFHPSVVTYTTLCHGLC--RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 695
Query: 219 KEKVFDALGILNQMKSDGI-KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
+V +ALG +M D + P ++ Y+ +++G+ +A E + ++ G +PDV
Sbjct: 696 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVV 755
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
T+++ INGLC ++ G+++ M E G K D+ YN ++ A C E + L++EM
Sbjct: 756 TFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM 815
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
K GI N T+ I+I L I EA C ++ I L
Sbjct: 816 KTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRS 873
Query: 398 RKALELLKQMADKDVSPGA 416
+ALELL+ M SP A
Sbjct: 874 EQALELLRAMVADGGSPDA 892
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 39/353 (11%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF--------------RINRVGFA 153
+ +N + F F L+ AHR ++++ L +P + RV A
Sbjct: 270 RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEA 329
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNV 212
E+ + M G D T +++L +C+ R + E V+ M++ C +V ++ +
Sbjct: 330 FELFDVMKESGCSADVITYNILLKGLCKLRRIP--EAYRHVELMRRTEGCSPNVVTFSTL 387
Query: 213 IRSLVKKEKVFDALGILNQMKS-DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL--- 268
I+ L +V A + +M + +GI P+ Y +L G+ D + E+ F+++L
Sbjct: 388 IQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLERE 447
Query: 269 ------------------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
V P + TYN + GL K V + ++ M E G PD
Sbjct: 448 WRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPD 507
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
VIT+N++L LCK + + + K +G N+ TYS +IDGL+ + EA LL
Sbjct: 508 VITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA 567
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G + + + GL + G + A+ +L+QM D P A + L+
Sbjct: 568 KMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 620
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+ LG ++ M + G ++ + +V+ L K++++ DA + + G +P++V Y+ ++
Sbjct: 491 DALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 550
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G+ +A +L +++ LG + TY+ ++GL K +E + ++ M + G
Sbjct: 551 DGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCL 610
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD +TYNTL+ K + L L++EM G ++ TY+ + GL G EA +
Sbjct: 611 PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI 670
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA-DKDVSPGARVWEALL 423
L+ +G + + + GLC+ G V +AL ++MA D+ V+P + AL+
Sbjct: 671 LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALI 726
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 23/280 (8%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
N +IN G C G+ C D F + ++ GF +V Y+ VI L
Sbjct: 5 NVLIN-GLCKAGRVC---------------DAFTAFRKAIQ-FGFRPTVVTYSTVIDGLC 47
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
+ +V +L +M G P+ V Y ++N ++ Q +A L + + G P++
Sbjct: 48 RDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELI 107
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
T+ + I GLCK+ +EA +++ M + G PDV + LL ALC++ ++ +++
Sbjct: 108 TFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV 167
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC--GLCQRG 395
G + TY+ M+DGL G +EA G++ + L + + ++F TI GL + G
Sbjct: 168 LLIGFTPDAVTYNTMVDGLYKAGR-LEAAGMVLQLLAESF-SSPTVFTFTIAVDGLSKAG 225
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFV 433
+ A E M VSP ++AL+ L KLD
Sbjct: 226 NLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIA 265
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 134/305 (43%), Gaps = 26/305 (8%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDG 164
LI A R D+ F K +F R N V ++L M G
Sbjct: 7 LINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG 66
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
+ T + +++++ Q + E ++ M G ++ + +I+ L K+ ++
Sbjct: 67 CAPNAVTYNTLVNALLGQG--RAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A ++++M G PD+ +T++L+ + +A F ++L++G PD TYN ++
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVD 184
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GL K +EA ++ + E S P V T+ + L K L E M G+
Sbjct: 185 GLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSP 244
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM--FDETICGLCQRGLVRKALE 402
N TY +IDGL G + A GLL + +Q+ M F + GLCQ + +A++
Sbjct: 245 NTVTYDALIDGLCKAGKLDIALGLLRDK-----NSQAGMFAFSSLLHGLCQAHRLEEAIQ 299
Query: 403 LLKQM 407
LLK M
Sbjct: 300 LLKAM 304
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
MV Y +I L K +V DA + G +P +V Y+ V++G+ + K +L +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G P+ TYN +N L Q + ++ M G P++IT+ +++ LCK
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+ +V EM +G V +++ +++++ L G + EA ++ L G + ++
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
+ GL + G + A +L+ +A+ SP
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSP 209
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 163/383 (42%), Gaps = 30/383 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEK--RENFETPEFI-FIDLI 123
+L + C P Y ++ L + + ++ L + EK R+ P I + LI
Sbjct: 670 ILDYMAARGCAPNAITYSSIVDGLCKAGR---VTEALGYFEKMARDEVVAPHVIAYSALI 726
Query: 124 KTYADAHRFQDSVNLFYK------IP---KFRI--------NRVGFAIEILNCMINDGFC 166
A R ++ + IP F I R+ +E+ M G
Sbjct: 727 DGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCK 786
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
D + ++++ C + + S+ L ++EMK G V + VI++L +++ +A+
Sbjct: 787 ADIYAYNAMINAYCLKGEFSAAYAL--LEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAV 844
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ + D D + Y ++ ++ +A EL ++ G PD Y ++GL
Sbjct: 845 SYFHSIPEDC--RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGL 902
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
K + E K++ M G PD+ TY ++ L K ++L + +EM K + +
Sbjct: 903 FKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDA 962
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
YS +ID + +A LL + G+ +M+ + LC+ KALE++++
Sbjct: 963 IVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIRE 1019
Query: 407 MADKDVSPGARVWEALLLSSVSK 429
M K+ PG +W +L + V++
Sbjct: 1020 MKSKNCEPGIHIWTSLATAYVAE 1042
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%)
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P +V Y ++ G+ A L + ++ GL PDV T+N ++GLCK+ +
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ E G +P+V+TY+TL+ L K+ +++ +L+ +M G N TYS ++DGL
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G + +A +L + + G + ++ I G +R +R+A+ LL++M + P
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649
Query: 418 VWEAL 422
+ L
Sbjct: 650 TYTTL 654
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%)
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+V Y +++NG+ A F + + G P V TY+ I+GLC+ N V+ G K++
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M G P+ +TYNTL+ AL L++ M G L T+ ++I GL +G
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+I A +++E +++G + + LC+ G V +A +Q+ +P A +
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 421 ALL 423
++
Sbjct: 181 TMV 183
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 157/311 (50%), Gaps = 23/311 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L + Y CEP +Y+ V+K L ++ D ++ + ++ P + +++ ++
Sbjct: 252 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC--PPNVVTFNMLISF 309
Query: 127 -ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ ++ + +IPK+ G + + + +L + C+Q+ +
Sbjct: 310 LCRKGLVEPALEVLEQIPKY------------------GCSPNSLSYNPLLHAFCKQKKM 351
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D+ + F+ M G +V Y ++ +L + +V A+ +L+Q+K G P ++ Y
Sbjct: 352 --DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 409
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
V++G+ +A EL +E++ GL PD+ TY+ GLC+++ +E I+ ++++
Sbjct: 410 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 469
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G +P+ + YN ++ LCK RE + +L M G + N TY+I+I+GLA +G I EA
Sbjct: 470 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 529
Query: 366 CGLLEEALNKG 376
LL+E ++G
Sbjct: 530 RDLLDELCSRG 540
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 147/313 (46%), Gaps = 37/313 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R A+ +L+ M+ D T +++L + C++ + + + EM+ G +V
Sbjct: 174 GRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK--QAMKLLDEMRDKGCTPDIV 231
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y V+ + ++ +V DA+ L + S G +P+ V Y +VL G+ E + AEEL E+
Sbjct: 232 TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 291
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI------AC-------------------- 301
G P+V T+N+ I+ LC++ VE ++++ C
Sbjct: 292 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKM 351
Query: 302 ---------MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
M G PD+++YNTLL ALC+ E++ EL+ ++K KG L +Y+ +
Sbjct: 352 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 411
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDGL G EA LL E ++KGL + GLC+ + A+ ++ D +
Sbjct: 412 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 471
Query: 413 SPGARVWEALLLS 425
P ++ A++L
Sbjct: 472 RPNTVLYNAIILG 484
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+IR L + + +AL +L++M PD+V YT++L + Y +A +L DE+
Sbjct: 165 TLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK 224
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G PD+ TYNV +NG+C++ V+ I+ + + G +P+ ++YN +L+ LC
Sbjct: 225 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 284
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL+ EM KG N+ T++++I L KG + A +LE+ G S ++ +
Sbjct: 285 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHA 344
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C++ + KA+ L M + P + LL +
Sbjct: 345 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 154/351 (43%), Gaps = 27/351 (7%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI-KTYADAHRFQD 134
C P Y +++ + S + +LD E R+ TP+ + +++ R D
Sbjct: 191 CVPDVVTYTILLEATCKRSGYKQAMKLLD--EMRDKGCTPDIVTYNVVVNGICQEGRVDD 248
Query: 135 SVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG 192
++ +P + N V + I + G C +R ++EL+G
Sbjct: 249 AIEFLKNLPSYGCEPNTVSYNI------VLKGLCT-------------AERWEDAEELMG 289
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
EM + G +V + +I L +K V AL +L Q+ G P+ + Y +L+
Sbjct: 290 ---EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFC 346
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
Q+ KA D ++ G PD+ +YN + LC+ V+ ++++ +++ G P +I
Sbjct: 347 KQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLI 406
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
+YNT++ L K + EL+ EM KG+ ++ TYS + GL + I +A +
Sbjct: 407 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 466
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+ + +++ I GLC+R A++L M P + L+
Sbjct: 467 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 517
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 93/182 (51%), Gaps = 1/182 (0%)
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
C T++ G+ + A + DE+L VPDV TY + + CK++ + +K++
Sbjct: 162 TCDTLI-RGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDE 220
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M + G PD++TYN ++ +C+ ++ E +K + G N +Y+I++ GL +
Sbjct: 221 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 280
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+A L+ E KG F+ I LC++GLV ALE+L+Q+ SP + +
Sbjct: 281 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNP 340
Query: 422 LL 423
LL
Sbjct: 341 LL 342
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 143/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A+ + I +GF D T + ++ +C+ + L + M + G
Sbjct: 267 KLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVG--HALKVMDVMVQEGHDPD 324
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y V+ L K ++ +A GILNQM G PDI + ++ + +A +L
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + GL PDVYT+N+ IN LCK + + +++ M+ G PD +TYNTL+ LC +
Sbjct: 385 QVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLG 444
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + +L+KEM+ G + TY+ +IDGL K I EA + ++ +G+ + F+
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 504
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ + A +L+ QM + + P + ++L
Sbjct: 505 TLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSIL 542
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 174/402 (43%), Gaps = 52/402 (12%)
Query: 58 PKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF 117
P L L + + + P PE Y +I+ L + D+ VL +RE +
Sbjct: 55 PDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRVG 114
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKI--PKFRINR-------------VGFAIEILNCMIN 162
+ +++YA F D+V+L P F I G +++L + +
Sbjct: 115 VVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYS 174
Query: 163 D----GFCVDGKTCSLILSSVCEQRDLSSDELL---------------------GFVQE- 196
+ G D T + ++ ++C + + L+ GFV+E
Sbjct: 175 EMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEG 234
Query: 197 -----------MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
M ++G V +I K +V DALG + Q ++G +PD + Y
Sbjct: 235 SIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYN 294
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+NG+ A ++ D ++ G PDV+TYN+ +N LCK +E ++ M E
Sbjct: 295 TFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVER 354
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G PD+ T+NTL+ ALC L +L +++ KG+ ++ T++I+I+ L GD A
Sbjct: 355 GCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLA 414
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
L EE + G ++ I LC G + KAL+LLK+M
Sbjct: 415 LRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM 456
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 135/258 (52%), Gaps = 2/258 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
VG A+++++ M+ +G D T +++++ +C+ L +E G + +M + G + +
Sbjct: 306 VGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL--EEAKGILNQMVERGCLPDITTF 363
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I +L ++ +AL + Q+ G+ PD+ + +++N + D A LF+E+
Sbjct: 364 NTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKS 423
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G PD TYN I+ LC + + ++ ME G +TYNT++ LCK +
Sbjct: 424 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEE 483
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
E+ +M +GI N T++ +IDGL I +A L+ + +++GL + ++ +
Sbjct: 484 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILT 543
Query: 390 GLCQRGLVRKALELLKQM 407
C++G ++KA ++L+ M
Sbjct: 544 HYCKQGDIKKAADILQTM 561
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 162/345 (46%), Gaps = 23/345 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDS 135
+P Y+ V+ L +N Q + +L+ + +R P+ F LI +R +++
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCL--PDITTFNTLIVALCSGNRLEEA 379
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
++L ++ G D T +++++++C+ D L +
Sbjct: 380 LDLARQVTL------------------KGLSPDVYTFNILINALCKVGD--PQLALRLFE 419
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EMK G V Y +I +L K+ AL +L +M+S G V Y +++G+ +
Sbjct: 420 EMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKM 479
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+AEE+FD++ + G+ + T+N I+GLCK ++ ++I+ M G +P+ ITYN
Sbjct: 480 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYN 539
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++L CK ++ + ++++ M G +++ TY +I+GL G A LL K
Sbjct: 540 SILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 599
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
G+ ++ I L +R R A+ L ++M + P A ++
Sbjct: 600 GMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYK 644
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 7/245 (2%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ DY V++SL + AL I +M DG+ P IV Y ++NG+ D ELF
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+EL+ G PDV TYN I+ LCK ++E ++ M G P+V+TY+ L+ LCKV
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 325 RELNRLRELVKEMKWKG--IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL--CTQ 380
++ REL++EM K ++ N+ TY+ +DGL + EAC L+ + L
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFI 438
+ F I GLC+ G + +A + M P + AL+ L K++ +
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 439 RLVDQ 443
+VD+
Sbjct: 241 SMVDK 245
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 133/263 (50%), Gaps = 13/263 (4%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEM--KKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S++++ +C+ + DE +QEM K ++ Y + + L K+ +A +
Sbjct: 109 TYSVLINGLCKVGRI--DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 166
Query: 229 LNQMKSDG---IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++ DG + PD V ++ +++G+ +A +FD+++ G VP+V TYN +NG
Sbjct: 167 MRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 225
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LCK + +E MI M + G PDVITY+ L+ A CK ++ EL+ M +G N
Sbjct: 226 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 285
Query: 346 L-----QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
+ T++I+I G G+ +A L EE + K L F I GLC+ G V A
Sbjct: 286 VLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 345
Query: 401 LELLKQMADKDVSPGARVWEALL 423
++L M + V P + AL+
Sbjct: 346 RDILDLMGNLGVPPNVVTYNALV 368
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 11/258 (4%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+++L S+C D ++ L F EM + G +V Y +I L K + + + ++
Sbjct: 5 NIVLQSLCRAGD-TARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G PD+V Y +++ + D +A L ++ G VP+V TY+V INGLCK +
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 293 EAGIKMIACMEELGSK-----PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL--N 345
+ ++I +E+ K P++ITYN+ L LCK EL++ ++ + + +
Sbjct: 124 DEARELI---QEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
T+S +IDGL G I EAC + ++ + G ++ + GLC+ + +A +++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 406 QMADKDVSPGARVWEALL 423
M DK V+P + L+
Sbjct: 241 SMVDKGVTPDVITYSVLV 258
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 7/276 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM-----V 207
A ++ M++ G D T S+++ + C+ + DE L + M G + V
Sbjct: 235 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRV--DEALELLHGMASRGCTPNVLVPDKV 292
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I K A + +M + ++PD++ + +++G+ A ++ D +
Sbjct: 293 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 352
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
LG+ P+V TYN ++GLCK +E + + M G PD ITY +L+ ALC+
Sbjct: 353 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRT 412
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ +LV E+K G + TY+I++DGL G +A +LEE + KG S F
Sbjct: 413 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 472
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + G + +ELL+ + K + P A ++L
Sbjct: 473 FSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 508
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 137/291 (47%), Gaps = 8/291 (2%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMINDG-----FCVDGKTCSLI 175
+I++ D D + + F + +RV A+E+L+ M + G D T +++
Sbjct: 238 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
++ C+ + ++ +EM ++ + +I L K +V A IL+ M +
Sbjct: 298 IAGACKAGNF--EQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 355
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ P++V Y +++G+ +A + +E++ G VPD TY + LC+ + +
Sbjct: 356 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 415
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+++++ ++ G PD +TYN L+ L K + + +++EM KG + T++ G
Sbjct: 416 LQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSG 475
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
L G++ LL L KG+ ++ + +C+ G + ++K+
Sbjct: 476 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 117/233 (50%), Gaps = 9/233 (3%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGF 165
K NFE +F +++ A Q V F + + +V A +IL+ M N G
Sbjct: 303 KAGNFEQASALFEEMV-----AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 357
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
+ T + ++ +C+ + +E F++EM G + Y +++ +L + + DA
Sbjct: 358 PPNVVTYNALVHGLCKSGRI--EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDA 415
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
L +++++KS G PD V Y ++++G+ +A + +E++ G PD +T+ +G
Sbjct: 416 LQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSG 475
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
L + N+ ++++ + G PD T +++L +C+ +L+ ++ ++KE +
Sbjct: 476 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 140/283 (49%), Gaps = 3/283 (1%)
Query: 142 IPKFRINRVGF-AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
I F IN + F A++ ++ G+ D T +++ + + + + L +QEM+K
Sbjct: 132 INGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKA--ALHLLQEMEKS 189
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
+V Y+ +I L K V DALG+ +Q+ GI D V Y +++G + +
Sbjct: 190 SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEV 249
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+L +++ + PD YT+N+ I+ LCK+ + ++A M + G KPD++TYN L++
Sbjct: 250 TQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEG 309
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C ++ REL M +G+ ++ Y+++IDG + EA L +E NK L
Sbjct: 310 YCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT 369
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I GLC G + +LL +M P + L+
Sbjct: 370 IASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 2/218 (0%)
Query: 208 DYT-NV-IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
DYT N+ I +L K+ ++ +A G+L M G KPDIV Y ++ G +E+ +A ELF+
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ GL PDV YNV I+G CK V+ + + + P + +YN+L+ LC
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +++L+ EM ++ TY+I+ID L +G I+EA G+L + KG+ ++
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C R V A ++ +M + P + L+
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++L M+ + D T ++++ ++C++ + E G + M K G +V Y ++
Sbjct: 251 QLLTKMVRENVDPDDYTFNILIDALCKEGRIL--EAQGVLAMMSKRGEKPDIVTYNALME 308
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+E V +A + N+M G++PD++ Y ++++G + +A LF EL LVP
Sbjct: 309 GYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVP 368
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK-VRELNRLREL 333
+ +YN I+GLC + K++ M PDV+TYN L+ ALCK R L L L
Sbjct: 369 TIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V MK KG+ N+ TY+ M+DG + ++ A + + GL ++ I G C+
Sbjct: 429 VMMMK-KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
+V +A+ L K+M K++ P + +L+
Sbjct: 488 TEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 172/377 (45%), Gaps = 43/377 (11%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
N +P ++ +I L + + + VL + KR E P+ + + L++ Y
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG--EKPDIVTYNALMEGYCSRENVH 317
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNC-MINDGFC----VDGK-----------------T 171
++ LF R+ + G ++LN ++ DG+C VD +
Sbjct: 318 EARELFN-----RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIAS 372
Query: 172 CSLILSSVCEQRDLSS-----DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
+ ++ +C +S DE+ G Q +V Y +I +L K+ ++ +AL
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD-------VVTYNILIDALCKEGRILEAL 425
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
G+L M G+KP+IV Y +++G ++ + A+++F+ ++ GL PD+ YNV ING
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK V+ I + M PD+ +YN+L+ LC + + ++EL+ EM G ++
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+I++D +A L + + +G+ + LC+ ++ A + LK
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKH 604
Query: 407 MADKDVSPGARVWEALL 423
+ SP + + L+
Sbjct: 605 LLMHGCSPNVQTYTILI 621
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ +++ G + +T +I + A +L + G +P++V + ++NG
Sbjct: 75 ISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIING 134
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ KA + LL G + D +TY INGL K ++A + ++ ME+ +P+
Sbjct: 135 FCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPN 194
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
++ Y+ L+ LCK ++ L ++ +GI+L+ TY+ +IDG S G E LL
Sbjct: 195 LVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLT 254
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + + + F+ I LC+ G + +A +L M+ + P + AL+ S+
Sbjct: 255 KMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++ ++V+ A+ + Q++S GI P I +T+++N Q A L +L
Sbjct: 58 FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATIL 117
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P++ T+N ING C + + + G D TY TL+ L K ++
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L++EM+ + NL YS +IDGL G + +A GL + +G+ + ++ I
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C G ++ +LL +M ++V P + L+
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILI 272
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%)
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
K G+ +V + +I +F AL + + G D Y ++NG+
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
A L E+ + P++ Y+ I+GLCK V + + + + E G D +TYN+L+
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
C V + +L+ +M + + + T++I+ID L +G I+EA G+L +G
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + G C R V +A EL +M + + P + L+
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%)
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
V DA+ N+M P + +L ++ Y A LF +L G+ P + T+
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ IN Q++ ++A + + G +P+++T+NT++ C + + + + +
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G + + TY +I+GL+ G I A LL+E + M+ I GLC+ G V
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL L Q+ ++ + A + +L+
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLI 237
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N V A +I N M+ G D +++++ C+ + DE + +EM+ +
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMV--DEAIVLFKEMRHKNLIPDIA 511
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE- 266
Y ++I L ++ +L++M G PD++ Y ++L+ + + KA LF +
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571
Query: 267 ---------------------------------LLVLGLVPDVYTYNVYINGLCKQNNVE 293
LL+ G P+V TY + IN LCK +
Sbjct: 572 VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFG 631
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ +++ ME+ PD IT+ ++ L + E ++ +L +EM +G+V
Sbjct: 632 EAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%)
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C+ NV+ + M + P ++ LL A+ ++ L +++ KGI ++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
T++I+I+ + A LL L G F+ I G C G++ KAL+ +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 407 M 407
+
Sbjct: 151 L 151
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 155/328 (47%), Gaps = 27/328 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV--------------GFAIE 155
++F LI Y ++ +D++ + +++P +V GF E
Sbjct: 67 YVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKE 126
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
IL C G+ ++++ C++ ++ + ++K G +V + ++
Sbjct: 127 ILEC----GYPASLYFFNILMHRFCKEGEIRLSQ--SVFDAIRKWGLRPSVVSFNTLMNG 180
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+++ + + + M + G++PD+ Y++++NG+ + +A ELF E+L GLVP+
Sbjct: 181 YIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPN 240
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L + R L+
Sbjct: 241 GVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLIN 300
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG+ + TY+ +IDG GD+ A + + + + + I GLCQ G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEG 360
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
A ++L++M + P + + ++
Sbjct: 361 RSVDAEKMLREMLSVGLKPDSGTYTMII 388
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ + M G D T S++++ +C++ + DE EM G V +T
Sbjct: 190 GFRLK--SAMHASGVQPDVYTYSVLINGLCKESKM--DEANELFXEMLDKGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K KV A+ I QM S + PD++ Y ++ G+ + D +A L +E+ +
Sbjct: 246 TLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK ++E + M E + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ M++ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKV--DLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++N+M G+KPD + YT +++G D A E ++ +
Sbjct: 283 IYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G V ++ T
Sbjct: 403 LLKEMQRDGHVPSVVT 418
>gi|449480434|ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 638
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N+V A EIL + DG + ++S C++++ +L V M +
Sbjct: 277 NKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKN--HHRVLELVHTMIVKNRNPDIF 334
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I K A + N +K G PD+V YT +++G A +L+ E+
Sbjct: 335 TYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEM 394
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G +P+ Y+YN I G CK N++ +K+ M + G K ++ NTL+ LC
Sbjct: 395 IDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRT 454
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + +EM K IV ++ TY+ +I G +G ++++ LL+E KGL +S +
Sbjct: 455 DEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHL 514
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I LCQ G V++A E+ M ++ + P
Sbjct: 515 IQKLCQLGSVQEAKEMWNDMHNRGLQP 541
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I++ KV A IL Q DG+ P + +++G ++++ + EL ++V
Sbjct: 269 LIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKN 328
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
PD++TY ING CK ++ +++ G PD++ Y TL+ CK+ +L
Sbjct: 329 RNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDAS 388
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L EM KG + N +Y+ +I G G++ EA L ++ L+ G + + I GL
Sbjct: 389 KLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGL 448
Query: 392 CQRGLVRKALELLKQMADKDV 412
C G +A + ++M K++
Sbjct: 449 CLHGRTDEAYDFFREMPCKNI 469
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 4/244 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ N + + G+ D + ++ C+ L L F EM GF Y +
Sbjct: 352 AFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWF--EMIDKGFLPNEYSYNTL 409
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIK-PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
I K + +A+ + +M G K + C T++L G+ + +A + F E+
Sbjct: 410 IYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLIL-GLCLHGRTDEAYDFFREMPCKN 468
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+V DV TYN I G C++ V ++ ++ G +P +Y L+Q LC++ + +
Sbjct: 469 IVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAK 528
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E+ +M +G+ + T +I GL +G ++E L L L Q F + I L
Sbjct: 529 EMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSL 588
Query: 392 CQRG 395
Q G
Sbjct: 589 IQIG 592
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 4/236 (1%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
N IR + + V +A+ + +K G +P + + + +L++ ++
Sbjct: 196 NYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMET 255
Query: 271 GLVPDV--YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ DV T I C N V +++ E G P +N L+ CK + +
Sbjct: 256 GVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHH 315
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R+ ELV M K ++ TY +I+G ++A + ++G M+ I
Sbjct: 316 RVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLI 375
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
G C+ G + A +L +M DK P + L+ + LD + +++D
Sbjct: 376 HGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLD 431
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P+ + YI +C+ VE + ++E G +P V T+N Q+ K + + +L
Sbjct: 189 PEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKL 248
Query: 334 VKEMKWKGIV--LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ M G+ ++++T +I + + A +L ++L GL + F++ I G
Sbjct: 249 YEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGF 308
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ + LEL+ M K+ +P ++ ++
Sbjct: 309 CKEKNHHRVLELVHTMIVKNRNPDIFTYQEII 340
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 111 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRJAQ--SVFDAITKWGLRPSVVSYN 164
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG + A ELFDE+LV
Sbjct: 165 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVK 224
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ + I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 225 GLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 284
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG +GD+ A + + + + I G
Sbjct: 285 HHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISG 344
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC G A ++L++M + P AR + ++
Sbjct: 345 LCXEGRSVDAEKMLREMLSVGLKPDARTYTMII 377
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWG 155
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ CK + +
Sbjct: 156 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDAN 215
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N ++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 216 ELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 275
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A L+ +M+ K + P + L+
Sbjct: 276 CKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 307
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 4/232 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCF 204
R+ + + + M+ G D T S++++ C E + ++EL EM G
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELF---DEMLVKGLVP 228
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A L
Sbjct: 229 NXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLI 288
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+ GL PD TY I+G CK+ ++++ + M + + D + Y L+ LC
Sbjct: 289 DEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXE 348
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 349 GRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 400
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M++ D T + ++ +C++ DL L + EM G +
Sbjct: 244 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL--IDEMSXKGLKPDKI 301
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + + D V YT +++G+ + V AE++ E+
Sbjct: 302 TYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREM 361
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L +GL PD TY + IN CK+ +V G K++ M+ G P V+TYN L+
Sbjct: 362 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I L KK + A ++++M G+KPD + YT +++G + D A E
Sbjct: 265 LITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXK 324
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ D Y I+GLC + KM+ M +G KPD TY ++ CK
Sbjct: 325 RMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKG 384
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ + +L+KEM+ G V ++ TY+++++G
Sbjct: 385 DVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 136/268 (50%), Gaps = 4/268 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTN 211
A + N M+ G + T ++ +C+ +L +++ELL EM+K G + Y +
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL---DEMRKKGLQLNVCIYNS 508
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ + K + A+ ++ +M+ GI PD + YT V++ D KA +L E+L G
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V T+NV +NG C +E G +++ M E G PD ITYNTL++ C +N
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
++ K M+ +G+ + TY+I+I G ++ EA L +E + KG + ++ I
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVW 419
++ + +A EL ++M + ++
Sbjct: 689 YKKKKILEARELFEEMRGHGLVADGEIY 716
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 118/217 (54%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ YT +I+ + KV + + ++M S G+KPD V YT +++ + V A L +E
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ +G+ P++ TY I+GLCK ++ +++ M + G + +V YN+++ +CK
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + +L+KEM+ GI + TY+ +ID GDI +A LL+E L++GL F+
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C G++ LL M +K + P A + L+
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ +V A +L M D + S ++ C +L + L + +M+ G
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK--KALKLMDDMQIKGLKPN 327
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y ++I L K K F+A +L +M S I PD V YT +++G A + FD
Sbjct: 328 RYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFD 387
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L + PD TY I G + V + M G KPD +TY TL+ CK
Sbjct: 388 EMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG 447
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+ L EM G+ N+ TY +IDGL G++ A LL+E KGL +++
Sbjct: 448 EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYN 507
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+C+ G + +A++L+K+M + P A + ++
Sbjct: 508 SMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 122/229 (53%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM G V YT +I K ++ +A + N+M G+ P+IV Y +++G+
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ A EL DE+ GL +V YN +NG+CK N+E IK++ ME G PD ITY
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
T++ A C++ ++++ +L++EM +G+ + T++++++G G + + LL L
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KG+ + ++ + C R + ++ K+M ++ V+P + + L+
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 111/217 (51%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I K V A ++M S I PD + YT ++ G ++ + LF E
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ GL PD TY I+ CK + + M ++G P+++TY L+ LCK E
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L+ EL+ EM+ KG+ LN+ Y+ M++G+ G+I +A L++E G+ + +
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I C+ G + KA +LL++M D+ + P + L+
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 7/315 (2%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
LI TY + ++F+++ I + A ++L+ +++ G V +C+ LS +
Sbjct: 179 LIYTYKYWGPNPIAFDIFFQVL-VEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIAN 237
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+S+ + ++ + G + Y +I SL + KV +A +L QM PD+
Sbjct: 238 ----NSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDV 293
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V Y+ V++G + KA +L D++ + GL P+ YTYN I LCK K++
Sbjct: 294 VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLRE 353
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M PD + Y TL+ K+ + + EM K I + TY+ +I G G
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK 413
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+IE L E +++GL + I C+ G + A L +M ++P + A
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGA 473
Query: 422 LL--LSSVSKLDFVN 434
L+ L +LD N
Sbjct: 474 LIDGLCKHGELDTAN 488
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 146/311 (46%), Gaps = 21/311 (6%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
+P++I + LI+ + + + NLF++ MI+ G D T
Sbjct: 395 SPDYITYTTLIQGFGQGGKVIEPQNLFHE------------------MISRGLKPDEVTY 436
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ ++ C+ ++ + EM ++G +V Y +I L K ++ A +L++M
Sbjct: 437 TTLIDVYCKAGEMVN--AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEM 494
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ G++ ++ Y ++NG+ + +A +L E+ V G+ PD TY I+ C+ ++
Sbjct: 495 RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI 554
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ K++ M + G +P V+T+N L+ C + L L+ M KGIV + TY+ +
Sbjct: 555 DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ + + + + N+G+ S+ ++ I G C+ +++A L K+M +K
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674
Query: 413 SPGARVWEALL 423
P + AL+
Sbjct: 675 VPTVTSYNALI 685
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 2/258 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L+ M G ++ + +++ +C+ ++ ++ + ++EM+ G + YT V
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNI--EQAIKLMKEMEVAGIDPDAITYTTV 544
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + + A +L +M G++P +V + +++NG + + L +L G+
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPD TYN + C +N++ K+ M G PD TYN L++ CK R L
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L KEM KG V + +Y+ +I K I+EA L EE GL +++ +
Sbjct: 665 LYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCY 724
Query: 393 QRGLVRKALELLKQMADK 410
+ G V L L + +K
Sbjct: 725 EEGDVEITLNLCDEAIEK 742
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 2/228 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI+++ M G D T + ++ + C D+ D+ +QEM G +V + +
Sbjct: 522 AIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI--DKAHKLLQEMLDRGLQPTVVTFNVL 579
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + D +L M GI PD + Y ++ ++ +++ + G+
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TYN+ I G CK N++ + M E G P V +YN L++ K +++ RE
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARE 699
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L +EM+ G+V + + Y+ +D +GD+ L +EA+ K L +
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLLNE 747
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 160/340 (47%), Gaps = 33/340 (9%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGF 165
KR+ E F + LI R +++ +F ++ + R + V I N +I DGF
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV-----IYNTLI-DGF 336
Query: 166 CVDGKT----------------------CSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
C G SLI + EQR +DE ++E+++ G
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQR---TDEAECMIKEIQEKGIS 393
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ Y +I + A + ++M + GIKP YT +L+ + + +A++L
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F ++ G++PD +N I+G C +NV+ +++ M+ + PD +T+NT++Q C+
Sbjct: 454 FKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
++ REL EMK +GI + +++ +I G + +GDI +A + E L+ G
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + GLC+ A ELLK+M K ++P + L+
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 186/438 (42%), Gaps = 38/438 (8%)
Query: 21 PLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQ-QIPKQPHILSSLLHSFS------- 72
PL+P+ + Q + V+ SLT Q + + P ++ L+ F
Sbjct: 39 PLTPHFLEQSARSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDAR 98
Query: 73 --------IYNCEPPPEAYHFVIKTLA--ENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
+ P A H + + L + +I L R F++ +F L
Sbjct: 99 TLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKS-SIVFDYL 157
Query: 123 IKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGF 165
IK+ D +R ++ FY + + ++NR A + M
Sbjct: 158 IKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRI 217
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
T +++++ +C++ L + FV M+ G +V Y ++ +V A
Sbjct: 218 KSSVYTFNIMINVLCKEGKLKKAK--DFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAA 275
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
IL MK I+PD Y +++G+ Q +A ++F+E++ GL P YN I+G
Sbjct: 276 DAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
C + N++ M + G P + TYN+L+ AL + + ++KE++ KGI +
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
TY+I+I+G + +A L +E L G+ + + L ++ +++A +L K
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455
Query: 406 QMADKDVSPGARVWEALL 423
++ + V P A ++ AL+
Sbjct: 456 KITSEGVLPDAIMFNALI 473
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 116/241 (48%), Gaps = 10/241 (4%)
Query: 159 CMIND----GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
CMI + G D T +++++ C + LL EM G YT+++
Sbjct: 382 CMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLH--DEMLASGIKPTKKTYTSLLH 439
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L KK ++ +A + ++ S+G+ PD + + +++G + A EL ++ + + P
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D T+N + G C++ VE ++ M+ G KPD I++NTL+ + ++ +
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559
Query: 335 KEMKWKGIVLNLQTYSIMIDGLAS--KGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
EM G + TY+ ++ GL +GD+ E LL+E ++KG+ + + I G+
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEE--LLKEMVSKGMTPDDTTYFTLIEGIA 617
Query: 393 Q 393
+
Sbjct: 618 K 618
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A ++ + ++G D + ++ C ++ +++M ++ V
Sbjct: 445 NRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKG--AFELLKDMDRMKVPPDEV 502
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +++ ++ KV +A + ++MK GIKPD + + +++G + D A + +E+
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L G P V TYN + GLCK + +++ M G PD TY TL++ + KV
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ V A E+L M D T + I+ C R+ +E EMK+ G +
Sbjct: 480 SNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC--REGKVEEARELFDEMKRRGIKPDHI 537
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I ++ + DA + N+M G P ++ Y ++ G+ ++ AEEL E+
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEM 597
Query: 268 LVLGLVPDVYTYNVYINGLCKQN 290
+ G+ PD TY I G+ K N
Sbjct: 598 VSKGMTPDDTTYFTLIEGIAKVN 620
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 131/251 (52%), Gaps = 3/251 (1%)
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+I+ S+ E + D +L +EM LGF + Y + + VK + A+ + MK
Sbjct: 36 MIVESLVESKKF--DNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMK 93
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
+ P++ Y +++ G+ ++ AE+LF E+ V LVP+ T+N I+G CK V+
Sbjct: 94 RRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVD 153
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
I + M++ +P +IT+N+LL LCK R + R ++ E+K G V + TYSI+
Sbjct: 154 VAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIF 213
Query: 354 DGLASKGDIIEAC-GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
DGL D A L EA+ KG+ + + GLC+ G V KA E+LK + + +
Sbjct: 214 DGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGL 273
Query: 413 SPGARVWEALL 423
PG ++ ++
Sbjct: 274 VPGEVIYNTIV 284
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 159/345 (46%), Gaps = 32/345 (9%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGF 165
KR F++ LI R +D+ LF ++ + NRV F N +I DG+
Sbjct: 93 KRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTF-----NTLI-DGY 146
Query: 166 CVDGK---------------------TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
C G+ T + +LS +C+ R + +E + E+K GF
Sbjct: 147 CKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRI--EEARCMLNEIKCNGFVP 204
Query: 205 GMVDYTNVIRSLVKKEK-VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
Y+ + L+K + AL + + G+K D +++LNG+ + KAEE+
Sbjct: 205 DGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEV 264
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
L+ GLVP YN +NG C+ +++ I I ME G +P+ I +N+++ C+
Sbjct: 265 LKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCE 324
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
++ +++ E VK+M KGI +++TY+I+IDG +LEE G
Sbjct: 325 MQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVIS 384
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
+ I LC+ G + +A +L+ M + V P A ++ L+ S +
Sbjct: 385 YGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCT 429
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++EM++ G ++ Y ++I L K K+ +A +L M G+ P+ Y M+++G
Sbjct: 370 LEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCT 429
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+A FDE+ G+ + TYN I GLCK ++ +M + G PDVIT
Sbjct: 430 VGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVIT 489
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN+L+ + EL + MK G+ + T+ +I G + +G ++ L E L
Sbjct: 490 YNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKET-LFNEML 548
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
L +++ I + G V+KA L K+M D V P + + +L+L + +
Sbjct: 549 QMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKE 604
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 22/331 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P +Y +I L ++ + + VL + R I+ LI + ++++
Sbjct: 379 KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNAN-IYNMLIDGSCTVGKLREAL 437
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
F ++ K N +G I N +I G C GK L E + F+
Sbjct: 438 RFFDEMSK---NGIGATIVTYNSLIK-GLCKMGK--------------LKEAEEMFFL-- 477
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G C ++ Y ++I L + MK G+KP I + +++G +E
Sbjct: 478 ITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGC-SKEG 536
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
E LF+E+L + L PD YN I+ + +V+ + M ++G +PD TYN+
Sbjct: 537 IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNS 596
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ K +L+ ++LV +MK KG++ TYS++I G D A E L G
Sbjct: 597 LILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENG 656
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+ +E GL + G +++A + +M
Sbjct: 657 FLPNVCICNELSTGLRKDGRLQEAQSICSEM 687
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
IL +M+ +G KP+++ Y ++N + ++AE + +++ G++P+ YN+ I+G C
Sbjct: 369 ILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSC 428
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ ++ M + G ++TYN+L++ LCK+ +L E+ + G ++
Sbjct: 429 TVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVI 488
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ +I G ++ G+ + L E GL + F I G + G+ K L +M
Sbjct: 489 TYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKE-TLFNEM 547
Query: 408 ADKDVSPGARVWEALL 423
++SP V+ A++
Sbjct: 548 LQMNLSPDRVVYNAMI 563
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 136/315 (43%), Gaps = 22/315 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P E Y+ +I F +L+ +E EN E P I + +N
Sbjct: 345 PSVETYNILIDGYGRLCVFSRCFQILEEME--ENGEKPNVI------------SYGSLIN 390
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
K K + A +L M+ G + ++++ C L E L F EM
Sbjct: 391 CLCKDGK-----ILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLR--EALRFFDEM 443
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K G +V Y ++I+ L K K+ +A + + S G PD++ Y +++G +
Sbjct: 444 SKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNS 503
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
K EL++ + LGL P + T++ I+G C + ++ + M ++ PD + YN +
Sbjct: 504 QKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAM 562
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ + + + L KEM G+ + +TY+ +I G +G + E L+++ KGL
Sbjct: 563 IHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGL 622
Query: 378 CTQSSMFDETICGLC 392
++ + I G C
Sbjct: 623 IPEADTYSLLIQGHC 637
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M+ +G P M++ ++ + + +LF E++ LG PD Y + K +
Sbjct: 22 MRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGD 81
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
++ +++ M+ P+V YN L+ LCK + + +L EM + +V N T++
Sbjct: 82 LKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNT 141
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+IDG G++ A GL E + + F+ + GLC+ + +A +L ++
Sbjct: 142 LIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNG 201
Query: 412 VSPGARVWEALL 423
P + +
Sbjct: 202 FVPDGFTYSIIF 213
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%)
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ + EL+D + G +P + + L + + + + M LG +PD + Y
Sbjct: 12 HSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGR 71
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+ A K+ +L EL + MK + +V N+ Y+++I GL + I +A L E +
Sbjct: 72 AMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRN 131
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L F+ I G C+ G V A+ L ++M + V P + +LL
Sbjct: 132 LVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLL 178
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 3/232 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ ++ A E+ + + G C D T + ++S + S + L + MKKLG
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGN--SQKCLELYETMKKLGLKPT 521
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ + +I S KE + + N+M + PD V Y +++ KA L
Sbjct: 522 INTFHPLI-SGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQK 580
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ +G+ PD TYN I G K+ + ++ M+ G P+ TY+ L+Q C ++
Sbjct: 581 EMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLK 640
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ N +EM G + N+ + + GL G + EA + E + G+
Sbjct: 641 DFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGM 692
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 158/339 (46%), Gaps = 27/339 (7%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF-------YKIP--------------K 144
IE + N + ++F LI Y ++ +D+V + + +P K
Sbjct: 56 IETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLK 115
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+ F EIL C G+ ++++ C++ D+ + + K G
Sbjct: 116 YFNLVWAFYEEILEC----GYPASLYFFNILMHRFCKEGDIRLAQ--SVFDAITKWGLRP 169
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y ++ ++ + + + + M + G++PD+ Y++++NG+ + A ELF
Sbjct: 170 SVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 229
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+E+LV GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 230 EEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKK 289
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
LN+ +L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 290 GALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 349
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLCQ G A +++++M + P + ++
Sbjct: 350 TALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMII 388
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + ++ + M G D T S++++ +C++ + D+ +EM G
Sbjct: 183 RLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKM--DDANELFEEMLVKGLVPN 240
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ + QM S + PD++ Y ++ G+ + +A +L D
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMD 300
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 301 EMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 360
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ + LL+E G
Sbjct: 361 RSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+E+ M++ D T + ++ +C++ L+ L + EM G +
Sbjct: 255 GRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDL--MDEMSMKGLKPDKI 312
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + I+ D V YT +++G+ + V AE++ E+
Sbjct: 313 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREM 372
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L GL PD TY + IN CK+ +V G K++ M+ G P V+T
Sbjct: 373 LSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 142/276 (51%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ VG E L + G + C+ +L+ + ++ S D + M +V
Sbjct: 130 SEVGLVDEALRVYLKVGAFPAVQACNALLNGLLKKS--SFDIMWELYNNMVSRRLFPTVV 187
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ + ++ V A ++++M GI+P +V YT +++G+ + ++AE +F ++
Sbjct: 188 TYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQM 247
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ P++YTYNV ++G CK NV+ + + M + G +P+V+T+ L+ ALCKVREL
Sbjct: 248 KDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVREL 307
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
R +M G+V N+ ++ +IDG + G+ EA LL E + +
Sbjct: 308 LAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSIL 367
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I C+ G V +A ++LK+M + V + V+ +L+
Sbjct: 368 IKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLI 403
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 183/399 (45%), Gaps = 28/399 (7%)
Query: 51 TKQQQQIPKQP----HILSSLLHSFSIYNCEPPPEAY-HFVIKTLAENSQFCDISS-VLD 104
T +Q P P H+ S+++H + P +I+TL ++ ++S V +
Sbjct: 48 TSVLKQNPNNPTKKLHLYSAVIHYLTGAKVYPTARCLTKDLIQTLLQSCTPRRVNSLVFN 107
Query: 105 HIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFR------------INRVGF 152
+ + + +F LI +++ +++ ++ K+ F + + F
Sbjct: 108 ALSQLRGSKFNPSVFGVLIIAFSEVGLVDEALRVYLKVGAFPAVQACNALLNGLLKKSSF 167
Query: 153 AI--EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
I E+ N M++ T ++++ + C Q D+ + L + EM K G +V YT
Sbjct: 168 DIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSL--ISEMVKKGIEPTVVIYT 225
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I L + K+ +A + QMK G+ P++ Y ++++G + +A L+ +L
Sbjct: 226 TLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDD 285
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL P+V T+ + I+ LCK + A + M + G P+V+ +N+L+ K +
Sbjct: 286 GLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEA 345
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM+ I ++ TYSI+I G + EA +L+ +G+ S +++ I G
Sbjct: 346 TDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDG 405
Query: 391 LCQRGLVRKALELLK------QMADKDVSPGARVWEALL 423
C+ G + KALE+ K M + P A + +L
Sbjct: 406 YCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVML 444
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M + G + T ++++ C+ ++ + L Q M G +V + +I +L K
Sbjct: 247 MKDSGVFPNLYTYNVLMDGYCKTANVK--QALHLYQGMLDDGLQPNVVTFGILIDALCKV 304
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ A QM G+ P++V + +++G + +A +L E+ + PDV+TY
Sbjct: 305 RELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTY 364
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK---- 335
++ I C+ VE ++ ME+ G + + YN+L+ CK + + E+ K
Sbjct: 365 SILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKF 424
Query: 336 --EMKWKGIVLNLQTYSIMIDG 355
+M+ G+ + Y++M+ G
Sbjct: 425 FSDMRRNGLRPDALAYAVMLQG 446
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 166/341 (48%), Gaps = 9/341 (2%)
Query: 107 EKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFC 166
++R + + ++ A R ++ + K+ +F A ++L M G
Sbjct: 200 DERSGHGSQHSVLQRAVEGSAARGRHGSALEAYCKVREFDT-----AKKVLVEMRERGCG 254
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
++ T +++++ +C R + +E GF ++M+ G Y +I L K + +A
Sbjct: 255 LNTVTYNVLIAGLC--RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 312
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+L++M +KP++V Y +++G + + + +A ++ E++ G+ P+ TY+ + GL
Sbjct: 313 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 372
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK ++ ++ M +PD ITYN +++ + L+ EM+ GI N+
Sbjct: 373 CKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNV 432
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TYSIMI GL G+ +A LLEE KGL + ++ I G C+ G V A E+ +
Sbjct: 433 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 492
Query: 407 MADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
M +V P + +L+ LS V +++ F ++ ++ L
Sbjct: 493 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 533
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I +L + A +L+ ++ +G PD+ Y+ +++G+ D KA + DE+
Sbjct: 610 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 669
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P++ YN I+GLCK ++ + + G P+ +TY +L+ CKV +++
Sbjct: 670 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 729
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L EM GI + YS++ G +S GD+ +A L+EE +G + SS F+ +
Sbjct: 730 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS-FNNLV 788
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
G C+RG +++ L+LL + + + P A E ++ LS KL V+T F+ L
Sbjct: 789 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 842
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 154/361 (42%), Gaps = 21/361 (5%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y +I L ++ + S +L+ + + + F++ LI Y +
Sbjct: 430 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GLKPNAFVYAPLISGYCREGNVSLACE 488
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+F K+ K + + D +C + SLI R +E + +M
Sbjct: 489 IFDKMTKVNV-------------LPDLYCYN----SLIFGLSKVGR---VEESTKYFAQM 528
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
++ G Y+ +I +K + A ++ +M G+KP+ V Y +L +D
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
K F +L G++ D Y + I+ L N+EA ++++ +E+ GS PDV Y++L
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 648
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LCK + + ++ EM KG+ N+ Y+ +IDGL GDI A + L KGL
Sbjct: 649 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 708
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+ I G C+ G + A L +M ++P A V+ L S D F
Sbjct: 709 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 768
Query: 438 I 438
+
Sbjct: 769 L 769
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 150/337 (44%), Gaps = 29/337 (8%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
+ I+IDL+++Y F+ + + M++ G +D + ++
Sbjct: 572 DVIYIDLLESY------------------FKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 613
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ ++ ++ + + ++K G + Y+++I L K A GIL++M
Sbjct: 614 IHNLSSSGNM--EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 671
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ P+IVCY +++G+ D A +F+ +L GLVP+ TY I+G CK ++
Sbjct: 672 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 731
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ M G PD Y+ L +L + L++EM +G ++ +++ ++DG
Sbjct: 732 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDG 790
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+G + E LL + +GL + + I GL + G + + + ++ K
Sbjct: 791 FCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESA 850
Query: 416 ARVWEALLLSSVSKLDFVNTSFIRL--VDQILNTPCK 450
AR + +L +D +N I L VD ++ CK
Sbjct: 851 ARHFSSLF------MDMINQGKIPLDVVDDMIRDHCK 881
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 2/263 (0%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
R+ ++DE ++EM G + Y N++R L K ++ A +L QM D +PD +
Sbjct: 339 REGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI 398
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++ G A L E+ G+ P+VYTY++ I+GLC+ E ++ M
Sbjct: 399 TYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 458
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G KP+ Y L+ C+ ++ E+ +M ++ +L Y+ +I GL+ G +
Sbjct: 459 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 518
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
E+ + +GL + I G + G + A +L+++M D + P ++ L
Sbjct: 519 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 578
Query: 423 LLSSVSKLDF--VNTSFIRLVDQ 443
L S D V+++F ++DQ
Sbjct: 579 LESYFKSDDIEKVSSTFKSMLDQ 601
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M + G DG T +++ +C+ R S+E + EM +V Y N+I +++
Sbjct: 283 MEDYGLVPDGFTYGALINGLCKSR--RSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 340
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+A ++ +M + G++P+ + Y ++ G+ +A L +++ PD TY
Sbjct: 341 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 400
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ I G + ++ + ++++ ME G P+V TY+ ++ LC+ E + +L++EM
Sbjct: 401 NLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTT 460
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG+ N Y+ +I G +G++ AC + ++ + ++ I GL + G V +
Sbjct: 461 KGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEE 520
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ + QM ++ + P + L+ + D + +LV ++L+T K
Sbjct: 521 STKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE--QLVQRMLDTGLK 569
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 37/303 (12%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L M+ D D T +LI+ R S + + EM+ G + Y+ +I
Sbjct: 384 LLKQMVRDSHRPDTITYNLIIEG--HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHG 441
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L + + A +L +M + G+KP+ Y +++G + + A E+FD++ + ++PD
Sbjct: 442 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 501
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV- 334
+Y YN I GL K VE K A M+E G P+ TY+ L+ K +L +LV
Sbjct: 502 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 561
Query: 335 ----------------------------------KEMKWKGIVLNLQTYSIMIDGLASKG 360
K M +G++L+ + Y I+I L+S G
Sbjct: 562 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG 621
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
++ A +L G ++ I GLC+ KA +L +M+ K V P +
Sbjct: 622 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 681
Query: 421 ALL 423
AL+
Sbjct: 682 ALI 684
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 136/281 (48%), Gaps = 4/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +++ M+ G + T ++ +C+ + LL +++M + + Y +
Sbjct: 346 AFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL--LKQMVRDSHRPDTITYNLI 403
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + DA +L++M++ GI P++ Y+++++G+ + KA +L +E+ GL
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ + Y I+G C++ NV ++ M ++ PD+ YN+L+ L KV + +
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 523
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+M+ +G++ N TYS +I G GD+ A L++ L+ GL ++ + +
Sbjct: 524 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 583
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ + K K M D+ V R++ L+ LSS ++
Sbjct: 584 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 624
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 143/276 (51%), Gaps = 4/276 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ ++C++R L DE + EM + G +V Y +IR ++ ++ AL IL
Sbjct: 356 TYTVMVDAMCKERKL--DESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILG 413
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M+S+ +P+ Y ++ G ++ KA L ++L L P + TYN I+ CK
Sbjct: 414 LMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAG 473
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ ++ K++ ++E G PD TY+ + LCK + + +L +K KGI N Y+
Sbjct: 474 HFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYT 533
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+IDG G I EA LLE ++ SS ++ I G+C+ G V++ L +++ M+
Sbjct: 534 ALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKM 593
Query: 411 DVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
V P + L+ + + DF + + R+ +Q+++
Sbjct: 594 GVKPTVATYTILIEEMLREGDFDHAN--RVFNQMVS 627
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 149/314 (47%), Gaps = 39/314 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R N V A ++ N M N G + + + I+ +CE + DE + ++M++ C+
Sbjct: 261 RNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI--DEGISLFKKMRE-DDCYP 317
Query: 206 MV-DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V YT +I +L ++ + + + N+M+ +P++ YT++++ + + ++ +
Sbjct: 318 TVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRIL 377
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE-------------------- 304
+E++ GLVP V TYN I G C++ +EA ++++ ME
Sbjct: 378 NEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKR 437
Query: 305 -------------LGSK--PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
L SK P ++TYN+L+ CK + +L+ +K G+V + TY
Sbjct: 438 KHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTY 497
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
S+ ID L + EAC L KG+ M+ I G C+ G + +A+ LL++M
Sbjct: 498 SVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHS 557
Query: 410 KDVSPGARVWEALL 423
+D P + + +L+
Sbjct: 558 EDCLPNSSTYNSLI 571
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 130/267 (48%), Gaps = 8/267 (2%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ND + T + ++++ + ++ L +V ++ + G YT++I +
Sbjct: 205 MLNDMIVPNIYTLNTMVNAYSKMGNIVEANL--YVSKIFQAGLSPDSFTYTSLILGYCRN 262
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
V A + N M + G + + V YT +++G+ + LF ++ P V TY
Sbjct: 263 NDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTY 322
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
V I+ L + G+ + M E +P+V TY ++ A+CK R+L+ R ++ EM
Sbjct: 323 TVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMME 382
Query: 340 KGIVLNLQTYSIMIDGLASKGDI---IEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
KG+V ++ TY+ +I G +G I +E GL+E + ++E ICG +R
Sbjct: 383 KGLVPSVVTYNALIRGYCEEGRIEAALEILGLME---SNNCRPNERTYNELICGFSKRKH 439
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
V KA+ LL +M + ++P + +L+
Sbjct: 440 VHKAMTLLSKMLESKLTPSLVTYNSLI 466
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ I +L K +++ +A + N +K GIK + V YT +++G +A L + +
Sbjct: 497 YSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMH 556
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+P+ TYN I G+CK+ V+ G+ M+ M ++G KP V TY L++ + + + +
Sbjct: 557 SEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFD 616
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ +M G ++ TY+ I + G++ EA G++ + G+ S + I
Sbjct: 617 HANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLI 676
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
+ GL A +LK+M D P +W L+ S
Sbjct: 677 SAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLIWYKAS 716
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 39/273 (14%)
Query: 190 LLGFVQEMKK----LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
LL F+++M + + F + Y ++ L + + + + +M +D I P+I
Sbjct: 159 LLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLN 218
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++N + V+A ++ GL PD +TY I G C+ N+V + K+ M
Sbjct: 219 TMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK 278
Query: 306 GSKPDVITYNTLLQALCKVRELN-------RLRE-------------------------- 332
G + + ++Y T++ LC+ ++ ++RE
Sbjct: 279 GCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEG 338
Query: 333 --LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L EM+ + N+ TY++M+D + + + E+ +L E + KGL ++ I G
Sbjct: 339 MDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRG 398
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G + ALE+L M + P R + L+
Sbjct: 399 YCEEGRIEAALEILGLMESNNCRPNERTYNELI 431
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 145/331 (43%), Gaps = 43/331 (12%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCF-GMVDYTNVI 213
ILN M+ G T + ++ CE+ R ++ E+LG ++ C Y +I
Sbjct: 376 ILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN----CRPNERTYNELI 431
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
K++ V A+ +L++M + P +V Y +++ + A +L D L GLV
Sbjct: 432 CGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLV 491
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK------------------------- 308
PD +TY+V+I+ LCK +E + ++E G K
Sbjct: 492 PDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISL 551
Query: 309 ----------PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
P+ TYN+L+ +CK ++ +V+ M G+ + TY+I+I+ +
Sbjct: 552 LERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR 611
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+GD A + + ++ G + I C G V++A ++ +M + V P +
Sbjct: 612 EGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLT 671
Query: 419 WEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+ LL+S+ +L +F ++ ++L+ C
Sbjct: 672 Y-TLLISAYERLGLAYDAF-NVLKRMLDAGC 700
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 121/288 (42%), Gaps = 34/288 (11%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
+++ + K +LS +L S P Y+ +I + F +LD + +EN
Sbjct: 436 KRKHVHKAMTLLSKMLES----KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLL--KENG 489
Query: 113 ETP-EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK- 170
P ++ + I T + R +++ +LF + + I A E++ + DG C GK
Sbjct: 490 LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIK----ANEVMYTALIDGHCKAGKI 545
Query: 171 --------------------TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
T + ++ VC++ + E L V+ M K+G + YT
Sbjct: 546 DEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQ--EGLSMVENMSKMGVKPTVATYT 603
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I ++++ A + NQM S G KPD+ YT ++ + +AE + ++
Sbjct: 604 ILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEA 663
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
G++PD TY + I+ + ++ M + G P +N L+
Sbjct: 664 GVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 167/351 (47%), Gaps = 25/351 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y+ +I+ L + + +VLD + +R R V
Sbjct: 29 EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR---------------------RCVPDV 67
Query: 137 NLFYKIPKFRINRVGF--AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ + + R G+ A+++L+ M + G D T +++++ +C++ + D+ + F+
Sbjct: 68 VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV--DDAIEFL 125
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ + G V Y V++ L E+ DA ++ +M G P++V + M+++ + +
Sbjct: 126 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 185
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
A E+ +++ G P+ +YN ++ CKQ ++ + + M G PD+++Y
Sbjct: 186 GLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 245
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTLL ALC+ E++ EL+ ++K KG L +Y+ +IDGL G EA LL E ++
Sbjct: 246 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 305
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
KGL + GLC+ + A+ ++ D + P ++ A++L
Sbjct: 306 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 356
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 159/317 (50%), Gaps = 28/317 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L + Y CEP +Y+ V+K L ++ D ++ + ++ P + +++ ++
Sbjct: 124 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC--PPNVVTFNMLISF 181
Query: 127 -ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ ++ + +IPK+ G + + + +L + C+Q+ +
Sbjct: 182 LCRKGLVEPALEVLEQIPKY------------------GCTPNSLSYNPLLHAFCKQKKM 223
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D+ + F+ M G +V Y ++ +L + +V A+ +L+Q+K G P ++ Y
Sbjct: 224 --DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 281
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
V++G+ +A EL +E++ GL PD+ TY+ GLC+++ +E I+ ++++
Sbjct: 282 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 341
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G +P+ + YN ++ LCK RE + +L M G + N TY+I+I+GLA +G I EA
Sbjct: 342 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 401
Query: 366 CGLLEEALNKGLCTQSS 382
LL+E LC+++
Sbjct: 402 RDLLDE-----LCSRAG 413
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 96/187 (51%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++PD Y ++ G+ + A + DE+L VPDV TY + + CK++ + +
Sbjct: 28 VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 87
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K++ M + G PD++TYN ++ +C+ ++ E +K + G N +Y+I++ GL
Sbjct: 88 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 147
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +A L+ E KG F+ I LC++GLV ALE+L+Q+ +P +
Sbjct: 148 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 207
Query: 417 RVWEALL 423
+ LL
Sbjct: 208 LSYNPLL 214
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC-KVRELNRLRELVKE 336
YN + G C ++A +++A E+ +PD TYNTL++ LC + R N L ++ E
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVA---EMPVEPDAYTYNTLIRGLCGRGRTANAL-AVLDE 57
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M + V ++ TY+I+++ + +A LL+E +KG ++ + G+CQ G
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
V A+E LK + P + +L
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVL 144
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 192/437 (43%), Gaps = 70/437 (16%)
Query: 46 LTTPP----TKQQQQIPKQPHI--LSSLLHSFS-IYNCEPPPEAYHFVIKTLAENSQFCD 98
L+ PP + Q K H L L SF + + PPP + F K L ++
Sbjct: 13 LSLPPHFLSSSQNNFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFA-KLLTSIAKMKH 71
Query: 99 ISSVLDHIEKRENFETPE--FIFIDLIKTYADAHRFQDSVNLFYKIPKFR---------- 146
S+VL +K ++F P + +I ++ +R ++++ KI K
Sbjct: 72 YSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTT 131
Query: 147 -------INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
+ ++G A+++ + M+ +GF + T +++ +C+ R L+ E L EM
Sbjct: 132 LVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLT--EALNLFSEMIA 189
Query: 200 LGFCFGMVDYTNVIRSLV-----------------------------------KKEKVFD 224
G + Y ++I +L K+ KV +
Sbjct: 190 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTE 249
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +++ M G++PD+V Y +++G ++ + +A ++FD ++ G V +V +YN IN
Sbjct: 250 AHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLIN 309
Query: 285 GLCKQNNVEAGIKMI--ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
G CK ++ + + C +EL P+ +TY+TL+ LC V L L EM G
Sbjct: 310 GYCKIQRIDKAMYLFEEMCRQEL--IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQ 367
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ NL TYSI++D L + EA LL+ L +++ I G+C+ G + A +
Sbjct: 368 IPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARD 427
Query: 403 LLKQMADKDVSPGARVW 419
L +A + + P VW
Sbjct: 428 LFSNLAPRGLQPD--VW 442
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L+S+ + + S+ +L ++M G + T VI S +V AL +L ++
Sbjct: 62 LLTSIAKMKHYST--VLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILK 119
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +PD +T ++ G+ V +A ++FD+++ G P+V TY +NGLCK +
Sbjct: 120 LGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTE 179
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ + + M G PD+ TYN+L+ ALC + E + L+ EM I+ N+ + +I++D
Sbjct: 180 ALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVD 239
Query: 355 GLASKGDIIEACGLLE--------------EALNKGLCTQSSM----------------- 383
L +G + EA +++ AL G C +S M
Sbjct: 240 ALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVC 299
Query: 384 ----FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G C+ + KA+ L ++M +++ P + L+
Sbjct: 300 NVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A ++++ MI G D T + ++ C + ++ DE + M + G +V
Sbjct: 246 KVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEM--DEAVKVFDMMVRNGCVCNVVS 303
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K +++ A+ + +M + P+ + Y+ +++G+ A LF+E++
Sbjct: 304 YNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMV 363
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G +P++ TY++ ++ LCK + + + ++ +E PDV YN + +C+ +L
Sbjct: 364 ACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLE 423
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R+L + +G+ ++ T++IMI GL +G + EA L E G ++
Sbjct: 424 AARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTIT 483
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
GL Q +A++LL++M + S ALL+ +S
Sbjct: 484 QGLLQNNKTSRAIQLLEEMLARGFSADVST-TALLVKMLS 522
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 136/251 (54%), Gaps = 7/251 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L+ M +G+ T + ++ +C+ DL + + L +Q+M G +V YT +
Sbjct: 29 ALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQAL--LQKMADAGCAPNVVTYTAL 86
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV-LG 271
I L K + DA+ + +M G +PD+V Y +++G+ + A + EL++ G
Sbjct: 87 IDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESG 146
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+PDV TYN +I+GLCK ++ G++M+ M+ G PDV+T+ +++ LCK ++
Sbjct: 147 RIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAF 206
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGL--ASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
++ K M +G V + TYSIM+D L A++ D +E +LE + G S+ + I
Sbjct: 207 QVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEE--VLEHMVKSGHYALSATYAPLIH 264
Query: 390 GLCQRGLVRKA 400
L + G + A
Sbjct: 265 ALIRAGDIESA 275
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 3/228 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K AL +L+ M ++G +V YT +++G+ D A+ L ++
Sbjct: 13 YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P+V TY I+GLCK I+ + M G +PD++TYN+L+ LC ++
Sbjct: 73 DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132
Query: 329 RLRELVKE-MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+++E M G + ++ TY+ I GL G + + +LEE G+ F
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSI 192
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFV 433
I GLC+ + A ++ K M ++ P + + +L LS ++LD V
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 5/294 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M + F +D + +++ +C+ R L + M G+ +V YT +I L K
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKAR--KPRHALELLHVMAANGYDASVVTYTTLIDGLCKS 58
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ A +L +M G P++V YT +++G+ A + +L G PD+ TY
Sbjct: 59 GDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTY 118
Query: 280 NVYINGLCKQNNV-EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
N I+GLC N + +AG+ + M E G PDV+TYNT + LCK +L++ E+++EM
Sbjct: 119 NSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMD 178
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
GI ++ T+ +I GL I +A + + L +G S + + L + +
Sbjct: 179 RGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLD 238
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCKME 452
E+L+ M + + L+ + + D + S+ +Q + C ME
Sbjct: 239 TVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWA--YEQAMEAGCVME 290
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 5/268 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R++ G ++ L MI G D T + +S +C+ L D+ L ++EM + G
Sbjct: 130 RMDDAGLVLQEL--MIESGRIPDVVTYNTFISGLCKAGKL--DKGLEMLEEMDRGGISPD 185
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++I L K ++ DA + M G PD + Y+++L+ + EE+ +
Sbjct: 186 VVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLE 245
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G TY I+ L + ++E+ E G +V T+N + ALC+
Sbjct: 246 HMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSG 305
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + ++ M G + NL +Y+ +IDGL G++ +A L + L+ G C +F
Sbjct: 306 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFF 365
Query: 386 ET-ICGLCQRGLVRKALELLKQMADKDV 412
T I G C+ G + +A +LLK+M K++
Sbjct: 366 NTLISGFCKAGRLSQAQQLLKEMKAKNI 393
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 148/333 (44%), Gaps = 23/333 (6%)
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
++PH + CEP Y+ +I L ++ D VL + E+ P+ +
Sbjct: 94 RRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQEL-MIESGRIPDVV 152
Query: 119 -FIDLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCM 160
+ I A + + + ++ + I NR+ A ++ M
Sbjct: 153 TYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGM 212
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
+ G D T S++L ++ L + E + ++ M K G Y +I +L++
Sbjct: 213 LERGCVPDSLTYSIMLDNLSRANRLDTVEEV--LEHMVKSGHYALSATYAPLIHALIRAG 270
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
+ A Q G ++ + + + + A+ + ++ G +P++ +YN
Sbjct: 271 DIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYN 330
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGS-KPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+GLCK NV+ K+ M + G KPDVI +NTL+ CK L++ ++L+KEMK
Sbjct: 331 FVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKA 390
Query: 340 KGI-VLNLQTYSIMIDGLASKGDIIEACGLLEE 371
K I V ++ TY+ MIDG + G + +A LLEE
Sbjct: 391 KNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEE 423
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 28/251 (11%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYK------IPKF-----------RINRVGFAIE 155
+P+ + F +I A+R D+ +F +P R NR+ E
Sbjct: 183 SPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEE 242
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L M+ G T + ++ ++ D+ S + Q M+ G + + I +
Sbjct: 243 VLEHMVKSGHYALSATYAPLIHALIRAGDIESASW-AYEQAMEA-GCVMEVYTHNAFIGA 300
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV-P 274
L + K A IL M G P+++ Y V++G+ + A +L ++L G P
Sbjct: 301 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 360
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK----PDVITYNTLLQALCKVRELNRL 330
DV +N I+G CK + ++ ++E+ +K PDV+TYNT++ K L +
Sbjct: 361 DVIFFNTLISGFCKAGRLSQAQQL---LKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQA 417
Query: 331 RELVKEMKWKG 341
+ L++EM+ G
Sbjct: 418 KLLLEEMQAVG 428
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 27/236 (11%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y ++ L+ ++ + VL+H+ K ++ L TYA
Sbjct: 216 GCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYA--------LSATYAPL----- 262
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD--LSSDELLG 192
+ I I +A E + G ++ T + + ++C L+ + LLG
Sbjct: 263 ---IHALIRAGDIESASWAYEQ---AMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLG 316
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG-IKPDIVCYTMVLNGV 251
++ G ++ Y VI L K V DA + +M G KPD++ + +++G
Sbjct: 317 MIES----GSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGF 372
Query: 252 IVQEDYVKAEELFDELLVLGL-VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+A++L E+ + VPDV TYN I+G K +++ ++ M+ +G
Sbjct: 373 CKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 114/215 (53%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +IR L + +V DAL +L+ M G +P++V YT++L + + +A + DE+
Sbjct: 146 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMR 205
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P++ TYNV ING+C++ V+ +++ + G +PD ++Y TLL+ LC + +
Sbjct: 206 AKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWD 265
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ EL EM K + N T+ ++I G + A +LE+ G T +++ + I
Sbjct: 266 DVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVI 325
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+C++G V A +LL M +P + +L
Sbjct: 326 NSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVL 360
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 31/379 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIK 124
SLL C+P Y +++ + NS F +VLD E R TP + + +I
Sbjct: 164 SLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLD--EMRAKGCTPNIVTYNVIIN 221
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILN-CMINDGFCVDGK------TCSLILS 177
R D+ L ++P + GF + ++ + G C + + ++
Sbjct: 222 GMCREGRVDDARELLNRLPSY-----GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMME 276
Query: 178 SVCEQRDLSSDELLGF-------------VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
C +++ D L+ F +++M + G VI S+ K+ +V D
Sbjct: 277 KNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDD 336
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +LN M S G PD + YT VL G+ E + A+EL +E++ P+ T+N +I
Sbjct: 337 AFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFIC 396
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
LC++ +E I +I M E G V+TYN L+ C ++ EL + M K
Sbjct: 397 ILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP--- 453
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N TY+ ++ GL + + A L+ E L F+ + CQ+G + +A+EL+
Sbjct: 454 NTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELV 513
Query: 405 KQMADKDVSPGARVWEALL 423
+QM + +P + LL
Sbjct: 514 EQMMEHGCTPNLITYNTLL 532
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 143/276 (51%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+ +L+ M+ G + T +++L ++C R+ ++ + + EM+ G +V
Sbjct: 157 GRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC--RNSGFEQAMAVLDEMRAKGCTPNIV 214
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + ++ +V DA +LN++ S G +PD V YT +L G+ + + EELF E+
Sbjct: 215 TYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEM 274
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ +P+ T+++ I C+ VE I+++ M E G + N ++ ++CK +
Sbjct: 275 MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRV 334
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ +L+ +M G + +Y+ ++ GL +A LL E + F+
Sbjct: 335 DDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTF 394
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
IC LCQ+GL+ +A+ L++QM++ + G + AL+
Sbjct: 395 ICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALV 430
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 170/422 (40%), Gaps = 58/422 (13%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
++L C P Y+ +I + + D +L+ + F+ + L+K
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSY-GFQPDTVSYTTLLKG 257
Query: 126 YADAHRFQDSVNLFYKIPKFRI--NRVGF---------------AIEILNCMINDGFCVD 168
+ R+ D LF ++ + N V F AI++L M G +
Sbjct: 258 LCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATN 317
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
C+++++S+C+Q + D+ + +M G + YT V++ L + E+ DA +
Sbjct: 318 TTLCNIVINSICKQGRV--DDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKEL 375
Query: 229 LNQMKSDGIKPD-----------------------------------IVCYTMVLNGVIV 253
LN+M + P+ +V Y ++NG V
Sbjct: 376 LNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCV 435
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
Q A ELF + P+ TY + GLC ++ +++A M P+V+T
Sbjct: 436 QGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVT 492
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
+N L+ C+ L ELV++M G NL TY+ ++DG+ +A LL +
Sbjct: 493 FNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLV 552
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
+KG+ F I L + + +A++L + D + P A V+ +LL + +
Sbjct: 553 SKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEID 612
Query: 434 NT 435
N
Sbjct: 613 NA 614
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 147/329 (44%), Gaps = 25/329 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL+ Y C P +Y V+K L ++ D +L+ + R N E F I
Sbjct: 340 LLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEM-VRNNCPPNEVTFNTFICIL 398
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------- 170
+ ++ L ++ + + + N ++N GFCV G
Sbjct: 399 CQKGLIEQAIMLIEQMSE---HGCTVGVVTYNALVN-GFCVQGHIDSALELFRSMPCKPN 454
Query: 171 --TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + +L+ +C L D V EM + +V + ++ +K + +A+ +
Sbjct: 455 TITYTTLLTGLCNAERL--DGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIEL 512
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+ QM G P+++ Y +L+G+ A EL L+ G+ PDV T++ I L K
Sbjct: 513 VEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSK 572
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
++ +E +++ ++++G +P + YN +L LCK E++ + M G + N T
Sbjct: 573 EDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNEST 632
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGL 377
Y I+I+GLA +G + EA LL ++G+
Sbjct: 633 YIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 5/278 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R A E+LN M+ + + T + + +C Q+ L ++ +++M + G G
Sbjct: 365 RAERWDDAKELLNEMVRNNCPPNEVTFNTFICILC-QKGLIEQAIM-LIEQMSEHGCTVG 422
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ + + AL + M KP+ + YT +L G+ E A EL
Sbjct: 423 VVTYNALVNGFCVQGHIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDGAAELVA 479
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L P+V T+NV ++ C++ +E I+++ M E G P++ITYNTLL + K
Sbjct: 480 EMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 539
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
EL+ + KG+ ++ T+S +I L+ + I EA L + G+ ++ +++
Sbjct: 540 SSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYN 599
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + GLC+R + A++ M P + L+
Sbjct: 600 KILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILI 637
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 131/297 (44%), Gaps = 37/297 (12%)
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVD----YTNVIRSLVKKEKVFDALGILNQMKSDG- 236
+R ++ ++L G V+ +++ G C G T +IR+L ++ + DA +L + G
Sbjct: 48 RRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGS 107
Query: 237 -------------------------------IKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ PD YT ++ + + A L D
Sbjct: 108 PVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLD 167
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++L G P+V TY V + +C+ + E + ++ M G P+++TYN ++ +C+
Sbjct: 168 DMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 227
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ REL+ + G + +Y+ ++ GL + + L E + K FD
Sbjct: 228 RVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 287
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
I C+ G+V +A+++L+QM + + + ++++S+ K V+ +F L D
Sbjct: 288 MLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCN-IVINSICKQGRVDDAFKLLND 343
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 165/349 (47%), Gaps = 28/349 (8%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P+A Y+FVI L + + + LD+ E E + +I A+R ++
Sbjct: 90 PVPDAAIYNFVIHALCKAR---NTAKALDYFRSME-CEKNVITWTIMIDGLCKANRLPEA 145
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
F K+ K G + T +++++ C+ + LL ++
Sbjct: 146 TTYFAKMKK------------------KGTVPNEWTYNVLINGFCKVHKVHRAYLL--LK 185
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EMK+ G +V Y+ VI ++ KV A + QM +G P++V Y +L+G+
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+A EL DE+ GL PD ++Y+ + GLCK ++ +K+ PDV+ Y+
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 305
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ LCK L+ +L ++M+ ++ T++ ++DGL KGD ++ + E +
Sbjct: 306 TLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC-KGDRLQEAQQVLETMED 364
Query: 376 GLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
CT + + + I GLC+ G VR A E+ K+M + + P + +L+
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 413
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +++ +C+ L DE ++M++ +V +T ++ L K +++ +A +L M
Sbjct: 305 STLIAGLCKAGRL--DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ P+++ Y+ +++G+ A+E+F ++V G+ P+V TYN I+G C N V
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
++ + ++ M G PD+ITYNTL+ LCK L +MK K ++ TYS +
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G I A L ++ L + + F + G C GLV A LL++M D
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 542
Query: 413 SPGARVWEALL 423
SP + +L+
Sbjct: 543 SPDVYTYTSLV 553
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 113/218 (51%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y+++I L K +V DA + +M GI+P++V Y +++G + A L +
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 430
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G +PD+ TYN I+GLCK ++ M+ PDVITY+ L+ CK+
Sbjct: 431 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 490
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ R L +M + ++ ++ T+S +++G + G + +A LLEE + +
Sbjct: 491 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 550
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C+ G + +A +LK+MA + P + AL+
Sbjct: 551 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 588
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 143/302 (47%), Gaps = 4/302 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +V A ++ M+ +G + T + +LS +C R+ DE + EM++ G
Sbjct: 208 RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC--RNGLMDEAYELLDEMRERGLQPD 265
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y ++ L K K+ AL + + PD+V Y+ ++ G+ +A +LF+
Sbjct: 266 KFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFE 325
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ PDV T+ ++GLCK + ++ +++ ME+ P+VITY++L+ LCK
Sbjct: 326 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 385
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +E+ K M +GI N+ TY+ +I G + A L+EE G ++
Sbjct: 386 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 445
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
I GLC+ G +A L M K +P + L+ + ++D T F ++ Q
Sbjct: 446 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 505
Query: 444 IL 445
+
Sbjct: 506 AV 507
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 34/270 (12%)
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K+ GF + Y + +L++ ++ + IL GI P++ Y +V+ G+ D
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYI--------------------------------NG 285
KA EL +E+ G VPD YN I +G
Sbjct: 76 DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG 135
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LCK N + A M++ G+ P+ TYN L+ CKV +++R L+KEMK G+ N
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ TYS +I G + + A L + + G ++ + GLC+ GL+ +A ELL
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255
Query: 406 QMADKDVSPGARVWEALL--LSSVSKLDFV 433
+M ++ + P ++ L+ L K+D
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMA 285
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 148/334 (44%), Gaps = 23/334 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
+CEP + ++ L + + + VL+ +E R TP I + LI + +
Sbjct: 331 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC--TPNVITYSSLIDGLCKTGQVR 388
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
D+ +F ++ + + + N +I+ GFC+ S +L
Sbjct: 389 DAQEVFKRMI---VRGIEPNVVTYNSLIH-GFCMTNGVDSALL----------------L 428
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++EM G ++ Y +I L K + +A + MK+ PD++ Y+ ++ G
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 488
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
E A LFD++L ++PDV T++ + G C V+ +++ M PDV T
Sbjct: 489 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYT 548
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y +L+ CKV + R ++K M +G N+ TY+ +ID G A LLEE +
Sbjct: 549 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV 608
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G+ + I G C G + +A ++L+++
Sbjct: 609 GNGVQPNVITYRSLIGGFCGTGDLEEARKILERL 642
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 145/358 (40%), Gaps = 39/358 (10%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
+C P AY +I L + + + + + + REN P+ + F L+ R Q
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM--RENSCEPDVVTFTALMDGLCKGDRLQ 353
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMIN--------DGFCVDGKTCSLILSSVCEQRDL 185
++ +V +E NC N DG C G+ RD
Sbjct: 354 EA------------QQVLETMEDRNCTPNVITYSSLIDGLCKTGQV-----------RDA 390
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ M G +V Y ++I V AL ++ +M + G PDI+ Y
Sbjct: 391 QE-----VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 445
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++G+ +A LF ++ PDV TY+ I G CK ++ + M +
Sbjct: 446 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 505
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
PDV+T++TL++ C ++ L++EM ++ TY+ ++DG G ++EA
Sbjct: 506 AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 565
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L+ +G + I C+ G A LL++M V P + +L+
Sbjct: 566 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLI 623
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G +V TYN L +AL + R ++ ++K GI N+ TY+++I GL GD+ +A
Sbjct: 19 GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM-ADKDVSPGARVWEALL- 423
C LLEE G +++++ I LC+ KAL+ + M +K+V W ++
Sbjct: 79 CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVI----TWTIMID 134
Query: 424 -LSSVSKLDFVNTSFIRL 440
L ++L T F ++
Sbjct: 135 GLCKANRLPEATTYFAKM 152
>gi|449433055|ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Cucumis sativus]
Length = 602
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N+V A EIL + DG + ++S C++++ +L V M +
Sbjct: 241 NKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKN--HHRVLELVHTMIVKNRNPDIF 298
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I K A + N +K G PD+V YT +++G A +L+ E+
Sbjct: 299 TYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWFEM 358
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G +P+ Y+YN I G CK N++ +K+ M + G K ++ NTL+ LC
Sbjct: 359 IDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRT 418
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + +EM K IV ++ TY+ +I G +G ++++ LL+E KGL +S +
Sbjct: 419 DEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHL 478
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I LCQ G V++A E+ M ++ + P
Sbjct: 479 IQKLCQLGSVQEAKEMWNDMHNRGLQP 505
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I++ KV A IL Q DG+ P + +++G ++++ + EL ++V
Sbjct: 233 LIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELVHTMIVKN 292
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
PD++TY ING CK ++ +++ G PD++ Y TL+ CK+ +L
Sbjct: 293 RNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDAS 352
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L EM KG + N +Y+ +I G G++ EA L ++ L+ G + + I GL
Sbjct: 353 KLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGL 412
Query: 392 CQRGLVRKALELLKQMADKDV 412
C G +A + ++M K++
Sbjct: 413 CLHGRTDEAYDFFREMPCKNI 433
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 4/244 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ N + + G+ D + ++ C+ L L F EM GF Y +
Sbjct: 316 AFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKLWF--EMIDKGFLPNEYSYNTL 373
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIV-CYTMVLNGVIVQEDYVKAEELFDELLVLG 271
I K + +A+ + +M G K + C T++L G+ + +A + F E+
Sbjct: 374 IYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLIL-GLCLHGRTDEAYDFFREMPCKN 432
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+V DV TYN I G C++ V ++ ++ G +P +Y L+Q LC++ + +
Sbjct: 433 IVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAK 492
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E+ +M +G+ + T +I GL +G ++E L L L Q F + I L
Sbjct: 493 EMWNDMHNRGLQPMVCTRDHIISGLCEQGYVVEGMEWLITMLKSNLKPQKETFYKLIQSL 552
Query: 392 CQRG 395
Q G
Sbjct: 553 IQIG 556
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 4/236 (1%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
N IR + + V +A+ + +K G +P + + + +L++ ++
Sbjct: 160 NYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMET 219
Query: 271 GLVPDV--YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ DV T I C N V +++ E G P +N L+ CK + +
Sbjct: 220 GVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHH 279
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R+ ELV M K ++ TY +I+G ++A + ++G M+ I
Sbjct: 280 RVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLI 339
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
G C+ G + A +L +M DK P + L+ + LD + +++D
Sbjct: 340 HGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLD 395
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P+ + YI +C+ VE + ++E G +P V T+N Q+ K + + +L
Sbjct: 153 PEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKL 212
Query: 334 VKEMKWKGIV--LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ M G+ ++++T +I + + A +L ++L GL + F++ I G
Sbjct: 213 YEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGF 272
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ + LEL+ M K+ +P ++ ++
Sbjct: 273 CKEKNHHRVLELVHTMIVKNRNPDIFTYQEII 304
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 140/273 (51%), Gaps = 6/273 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M++DG + T ++++ ++C + E L +++M+ G +V Y +
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGH--RKEALSILRDMRGAGCGPNVVTYNTL 231
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + + +V A ++ M+ G+KP++V + ++NG+ A ++FDE++ GL
Sbjct: 232 VAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGL 291
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD +YN + G CK + + A M + G PDV+T+ +L+ +CK L R
Sbjct: 292 APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVT 351
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM--FDETICG 390
LV++M+ +G+ +N T++ +IDG KG + +A LL K + S+ ++ I G
Sbjct: 352 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA--LLAVRGMKQCRIKPSVVCYNALING 409
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G + +A ELL +M K + P + ++
Sbjct: 410 YCMVGRMDEARELLHEMEAKGLKPDVVTYSTII 442
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + M G D T + ++ +C+ +L + + V++M++ G V +T +
Sbjct: 314 ALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL--ERAVTLVRQMRERGLQMNEVTFTAL 371
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I KK + DAL + MK IKP +VCY ++NG + +A EL E+ GL
Sbjct: 372 IDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 431
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY+ I+ CK + + ++ M E G PD ITY++L++ LC + L+
Sbjct: 432 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHV 491
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K M G+ + TY+ +IDG +G++ A L ++ + G+ + I GL
Sbjct: 492 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLS 551
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +A +LL ++ +D P ++AL+
Sbjct: 552 KSARAMEAQQLLFKLYHEDPIPANTKYDALM 582
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 112/231 (48%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
V M++ G +V + +++ + K K+ DA + ++M +G+ PD V Y ++ G
Sbjct: 247 LVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYC 306
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A +F E+ G++PDV T+ I+ +CK N+E + ++ M E G + + +
Sbjct: 307 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEV 366
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+ L+ CK L+ V+ MK I ++ Y+ +I+G G + EA LL E
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KGL + I C+ A EL +QM +K V P A + +L+
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
SL + FD+ M SDG+ P++ Y +++ + + +A + ++ G P
Sbjct: 170 SLTSARRFFDS------MLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGP 223
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+V TYN + + V+ +++ M E G KP+++T+N+++ +CK ++ R++
Sbjct: 224 NVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 283
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
EM +G+ + +Y+ ++ G G EA + E KG+ F I +C+
Sbjct: 284 DEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 343
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G + +A+ L++QM ++ + + AL+
Sbjct: 344 GNLERAVTLVRQMRERGLQMNEVTFTALI 372
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 125/279 (44%), Gaps = 2/279 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
FR V A ++ M G + T + +++ +C+ + ++ EM + G
Sbjct: 236 FRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKM--EDARKVFDEMVREGLAP 293
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y ++ K +AL + +M GI PD+V +T +++ + + +A L
Sbjct: 294 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLV 353
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ GL + T+ I+G CK+ ++ + + M++ KP V+ YN L+ C V
Sbjct: 354 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMV 413
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ REL+ EM+ KG+ ++ TYS +I D A L ++ L KG+ + +
Sbjct: 414 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 473
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC + A L K M + P + +L+
Sbjct: 474 SSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 512
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 52/321 (16%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ A E+L+ M G D T S I+S+ C+ D S L Q+M + G
Sbjct: 413 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN--QQMLEKGVLPDA 470
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y+++IR L ++++ DA + M G++PD YT +++G + + A L D+
Sbjct: 471 ITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDK 530
Query: 267 LLVLGLVPDVYTYNVYINGLCK----------------QNNVEAGIKMIA---------- 300
++ G++PDV TY+V INGL K ++ + A K A
Sbjct: 531 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAEL 590
Query: 301 ----------CMEELGSKPDVI--------------TYNTLLQALCKVRELNRLRELVKE 336
CM+ L ++ D + Y+ L+ C+ + + K+
Sbjct: 591 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 650
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M G N + +I GL G ++EA ++++ LN + I G
Sbjct: 651 MLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGN 710
Query: 397 VRKALELLKQMADKDVSPGAR 417
V L++L MA + P R
Sbjct: 711 VDAVLDVLHGMAKDGLLPSPR 731
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P V+ YN +L AL L R M G+ N+ TY+I++ L +G EA
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L + G ++ + + G V A L+ M + + P + +++
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMV 267
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 127/251 (50%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +++ C +L ++L +QEM+ G + Y ++I L K KV DA +L +M
Sbjct: 14 STVINGYCLGGELQ--KVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREM 71
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ GI PD V YT +++G + A +LFDE+ +VPD Y I GLC+ +
Sbjct: 72 INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKM 131
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
K+ M G +PD +TY TL+ CK E+ + L +M G+ N+ TY+ +
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTAL 191
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
DGL G + A LL E KGL ++ + GLC+ G +R+A++L+++M +
Sbjct: 192 ADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251
Query: 413 SPGARVWEALL 423
P + L+
Sbjct: 252 YPDTITFTTLM 262
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 121/230 (52%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++EM G V YT +I K + A + ++M+ I PD + YT V+ G+
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
++A+++F+++ G+ PD TY I+G CK +E + M + G P+V+T
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y L LCK+ +++ EL+ EM KG+ LN+ TY+ +++GL G+I +A L+EE
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + F + C+ G + KA ELL++M D+ + P + L+
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLM 297
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 160/357 (44%), Gaps = 21/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ + +P Y+ +I L ++ + D VL + + ++ LI +
Sbjct: 32 LIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREM-INQGIVPDTVVYTTLIDGF 90
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
Q + LF ++ K RI A + C G C GK +
Sbjct: 91 CKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC----GLCRCGKM-------------ME 133
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+D++ +M G V YT +I K ++ A + NQM G+ P++V YT
Sbjct: 134 ADKVF---NKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTA 190
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ +G+ A EL E+ GL ++ TYN +NGLCK N+ +K++ ME G
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD IT+ TL+ A CK E+ + EL++EM +G+ + T++++++G G + +
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGE 310
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL L KG+ ++ ++ + C R +R E+ K M + V P + + L+
Sbjct: 311 RLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILI 367
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 158/343 (46%), Gaps = 23/343 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AY VI L + + V + + R E E + LI Y + + + +
Sbjct: 113 PDFIAYTAVICGLCRCGKMMEADKVFNKMFSR-GVEPDEVTYTTLIDGYCKSGEMEKAFS 171
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQE 196
L N M+ G + T + + +C+ + +++ELL E
Sbjct: 172 LH------------------NQMVQSGLTPNVVTYTALADGLCKLGQVDTANELL---HE 210
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M G + Y +++ L K + A+ ++ +M+ G+ PD + +T +++ +
Sbjct: 211 MCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGE 270
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
VKA EL E+L GL P V T+NV +NG C +E G +++A M E G P+ TYN+
Sbjct: 271 MVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNS 330
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L++ C + E+ K M +G++ + TY+I+I G ++ EA L +E KG
Sbjct: 331 LMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+S ++ I G ++ + +A EL ++M + ++ A ++
Sbjct: 391 FNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIY 433
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 1/205 (0%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
MK G PD+V Y+ V+NG + + K +L E+ + GL P++YTYN I LCK
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
V+ +++ M G PD + Y TL+ CK+ + +L EM+ + IV + Y+
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I GL G ++EA + + ++G+ + I G C+ G + KA L QM
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 412 VSPGARVWEALLLSSVSKLDFVNTS 436
++P + A L + KL V+T+
Sbjct: 181 LTPNVVTYTA-LADGLCKLGQVDTA 204
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 141/292 (48%), Gaps = 3/292 (1%)
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
S N F+ P N + A+ N M++ + +L+S+ + + S+ LL
Sbjct: 34 LSSSHNTFHSKP-LHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHST--LL 90
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
++M G + VI SL +V A L ++ G +PD +T ++ G+
Sbjct: 91 SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL 150
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
V+ +A LFD+++ G P+V TY INGLCK N A I+++ ME+ +P+V
Sbjct: 151 CVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNV 210
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+ ++TL+ +LCK R++ + EM KGI N+ TY+ +I GL + L+ E
Sbjct: 211 VVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNE 270
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + + + LC+ G+V +A +++ M + V P + AL+
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 185/406 (45%), Gaps = 35/406 (8%)
Query: 46 LTTPP---TKQQQQIPKQPHILSSLLHSFSIYNC----EPPPEAYHF--VIKTLAENSQF 96
L+ PP + +P ++L + S +N +PPP F ++ ++A+
Sbjct: 27 LSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH 86
Query: 97 CDISSVLDHIEKRENFETP-------------------EFIFIDLIKTYADAHRFQDSVN 137
S++L + ++F P +F F L K H+ D+
Sbjct: 87 ---STLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQ-PDATT 142
Query: 138 LFYKIPKFRI-NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
I + ++G A+ + + MI +GF + T +++ +C+ + S+ + ++
Sbjct: 143 FTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA--AIRLLRS 200
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M++ +V ++ +I SL K +V +A I ++M + GI P+IV Y +++G+ +
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ L +E++ ++PDV+T N ++ LCK+ V ++ M G +P+V+TYN
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ C E++ ++ M K V N+ +Y+ +I+G + +A L EE +
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
L + ++ I GLC G ++ A+ L +M + P + L
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 2/259 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
++N M++ D T + ++ ++C++ ++ E V M G +V Y ++
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVA--EAHDVVDMMIHRGVEPNVVTYNALMDG 324
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ +V A+ + + M +++ Y ++NG + KA LF+E+ L P+
Sbjct: 325 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 384
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TYN I+GLC ++ I + M G PD++TY TL LCK R L++ L+K
Sbjct: 385 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK 444
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
++ ++Q Y+ ++DG+ G++ +A L +KGL ++ I GLC++G
Sbjct: 445 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 504
Query: 396 LVRKALELLKQMADKDVSP 414
L+ +A +L +M SP
Sbjct: 505 LLAEASKLFSEMNKNGCSP 523
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 10/213 (4%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I K + V A+ + +M + P+ V Y +++G+ A LF
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G +PD+ TY + LCK +++ + ++ +E PD+ Y T+L +C+
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
EL R+L + KG+ N+ TY+IMI GL +G + EA L E +NK C+ +
Sbjct: 470 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE-MNKNGCSP----N 524
Query: 386 ETICGLCQRGLVR-----KALELLKQMADKDVS 413
+ L RG +R + +ELL++M + S
Sbjct: 525 DCTYNLITRGFLRNNEALRTIELLEEMLARGFS 557
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+ + EM G +V Y + L K + A+ +L ++ PDI YT +L
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G+ + A +LF L GL P+V+TYN+ I+GLCKQ + K+ + M + G
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 522
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
P+ TYN + + + E R EL++EM +G +++ T ++++ L+ G
Sbjct: 523 PNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 114/257 (44%), Gaps = 2/257 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N V A+++ + M++ + + + +++ C+ + S D+ + +EM + V
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQ--SVDKAMYLFEEMSRQELTPNTV 386
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L ++ DA+ + ++M + G PD+V Y + + + KA L +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PD+ Y ++G+C+ +E + + + G +P+V TYN ++ LCK L
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+L EM G N TY+++ G + + LLEE L +G S
Sbjct: 507 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLL 566
Query: 388 ICGLCQRGLVRKALELL 404
+ L GL + ++L
Sbjct: 567 VGMLSDDGLDQSVKQIL 583
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 191/425 (44%), Gaps = 71/425 (16%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF---IFIDLIKTYADAHRFQDSVNL 138
Y +I LA+ +F + ++L + +ET +F IF++L+K + + + + +
Sbjct: 94 TYSTLIHKLAQTKKFHAVDALLHQM----TYETCKFHENIFLNLMKHFYKSSLHERVLEM 149
Query: 139 FYKI-PKFR----INRVGFAIEIL----------NCM--INDGFCVDGKTC--SLILSSV 179
FY I P R + + + IL C+ +N+ V TC ++++
Sbjct: 150 FYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHH 209
Query: 180 CEQRDLSSDELLGFVQEMKKL---------------GFCFG------------------- 205
C+ DL S L + EMKK G C
Sbjct: 210 CKSGDLESA--LEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQI 267
Query: 206 ---MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y+ +I+ K A I+ M+S+G P++ Y++++NG + +A+E
Sbjct: 268 LPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKE 327
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+FDE+ GL PD Y IN C ++ ++++ M E+ K D +T+N LL+ LC
Sbjct: 328 VFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLC 387
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ + +++ + ++G+ LN +Y I+++ L KG++ ++C LL L++G +
Sbjct: 388 REGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYA 447
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
+E + LC+ G+V A+ L + +P + W L+ + KL FV L
Sbjct: 448 TSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFV----FEL 503
Query: 441 VDQIL 445
VD+++
Sbjct: 504 VDELV 508
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S++++ C++ L +E EMK G V YT +I ++ +A+ +L +M
Sbjct: 310 SVLMNGFCKEGRL--EEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEM 367
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K D V + ++L G+ + + +A + + L G+ + +Y + +N LC++ +
Sbjct: 368 TEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGEL 427
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
E ++ M G P T N LL LC+ ++ + + G ++++ +
Sbjct: 428 EKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHL 487
Query: 353 IDGLASKGDIIEACGLLEEALNK 375
I+ + + ++ L++E + K
Sbjct: 488 IEYICRERKLLFVFELVDELVEK 510
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 4/276 (1%)
Query: 149 RVGFAIEILNCMINDGFCVD-GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI N + G D G C+L+L +C+ + + E + + EM + GF
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLG-LCKVEEFEAGEEM--MNEMIEFGFVPSEA 321
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+N++ L KK + A ++N++K G+ P + Y ++N + +AE LF+ +
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GL P+ TY++ I+ CK+ ++ + + M E+G K V Y++L+ CK+ +L
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L EM G+ N+ Y+ +I G +G++ A L E KG+ + F
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC + +A +L +M + +V P + L+
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLI 537
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 138/279 (49%), Gaps = 4/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD-LSSDELLGFVQEMKKLGFCF 204
RI + A+ + + +++ G D + ++ S+CE +D + + E++G M+ G
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG---RMESSGCDL 248
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y IR L K ++V++A+ I N + G++ D+ Y ++ G+ E++ EE+
Sbjct: 249 SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+E++ G VP + ++GL K+ N+ + ++ +++ G P + YN L+ ++CK
Sbjct: 309 NEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD 368
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L+ L M KG+ N TYSI+ID +G + A L + G+ +
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPY 428
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ G +R A L +M + P ++ +L+
Sbjct: 429 SSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 157/336 (46%), Gaps = 30/336 (8%)
Query: 98 DISSVLDHIEKRENFETPE--FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
+I S D + K + F F++ LI + + ++ +LF
Sbjct: 335 NIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF---------------- 378
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
N M + G + T S+++ S C++ L D L F+ +M ++G + Y+++I
Sbjct: 379 --NNMGHKGLFPNDVTYSILIDSFCKRGKL--DVALHFLGKMTEVGIKATVYPYSSLISG 434
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K K+ A + ++M ++G+KP++V YT +++G + + A L+ E+ G+ P+
Sbjct: 435 HCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPN 494
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
YT+ I+GLC N + K+ M E P+ +TYN L++ CK R EL+
Sbjct: 495 TYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLD 554
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL------EEALN--KGLCTQSSMFDET 387
EM KG+V + TY +I GL S G + EA + ++ LN +G +
Sbjct: 555 EMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTAL 614
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ GL+ KA L ++M + P + L
Sbjct: 615 INGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 650
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 3/250 (1%)
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
LI + V +R+L L V+ M G + + V+ L++ + AL + +++
Sbjct: 151 LIQTYVQNRRELDG---LVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
S G++PD+ YT V+ + +D+++A E+ + G V TYNV+I GLCK V
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++ + G + DV TY TL+ LCKV E E++ EM G V + S ++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DGL KG+I A L+ + G+ +++ I +C+ G + +A L M K +
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387
Query: 414 PGARVWEALL 423
P + L+
Sbjct: 388 PNDVTYSILI 397
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 149/327 (45%), Gaps = 38/327 (11%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSL 174
+ F LI A+R ++ LF ++ ++ + N V + + I +G C +G T
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLI------EGHCKEGNT--- 546
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+ + ELL EM + G Y +I L +V +A +N ++
Sbjct: 547 ----------VRAFELL---DEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593
Query: 235 D--------GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ G P++V YT ++NG+ KAE L E+L +P+ TY +++ L
Sbjct: 594 EQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
+ N+E I++ + E G + +TYN L++ CK+ + E++ M GI +
Sbjct: 654 TSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDC 712
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+YS +I +GD+ EA L E LN+G+ + ++ I G C G + KA EL
Sbjct: 713 ISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDD 772
Query: 407 MADKDVSPGARVWEAL-----LLSSVS 428
M + V P + +L L+SSVS
Sbjct: 773 MMRRGVKPNRATYNSLIHGTCLMSSVS 799
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I++ V+ + D L ++ M GI P I + VLNG+I + A LFDE++ G
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L PDVY Y + LC+ + ++I ME G V TYN ++ LCK + +
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E+ + +KG+ ++ TY ++ GL + ++ E + G + + GL
Sbjct: 271 EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGL 330
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++G + A +L+ ++ V+P V+ AL+ S
Sbjct: 331 RKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 17/156 (10%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-------GFCFG 205
AI++ + ++ +GF + T ++++ C+ LG +QE ++ G
Sbjct: 662 AIQLHDVLL-EGFLANTVTYNILIRGFCK---------LGRIQEAAEVLVNMIDSGISPD 711
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+ +I ++ + +A+ + M + G+ PD V Y ++ G V + KA EL D
Sbjct: 712 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRD 771
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
+++ G+ P+ TYN I+G C ++V + +C
Sbjct: 772 DMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSC 807
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 129/244 (52%), Gaps = 1/244 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE G +++M G + Y +I + A + ++M S GI+P +V YT +
Sbjct: 393 DEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSL 452
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ + + A++LF++++ G PD+ +N I+G C N++ ++ M++
Sbjct: 453 IYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNI 512
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD +TYNTL+Q C+ ++ REL+KEMK +GI + +Y+ +I G + +GDI +A
Sbjct: 513 VPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFT 572
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ +E L+ G ++ I GLC+ A ELLK+M K ++P + + L+ +
Sbjct: 573 IRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFS-LIEGI 631
Query: 428 SKLD 431
K+D
Sbjct: 632 GKVD 635
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 3/290 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A +L+ M N G D T ++S +C+ L +E G +++MK++G V
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKL--EEASGILEKMKEIGLLPTAV 342
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I K + A G ++M I P + Y ++++ + ++ +A+ + ++
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+VPD TYN+ ING C+ N + + M G +P ++TY +L+ L K +
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+L +++ +G +L ++ +IDG + G++ A LL+E + + ++
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+ G C+ G V +A ELLK+M + + P + L+S SK +N +F
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNT-LISGYSKRGDINDAF 571
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 127/250 (50%), Gaps = 2/250 (0%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM +L + + +I L K+ K+ A + M++ G+KP++V Y V++G +
Sbjct: 226 EMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRG 285
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A + D + G+ PD YTY I+G+CK +E ++ M+E+G P +TYN
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ C +L + EM + I+ + TY+++I L +G + EA G++++ +
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFV 433
G+ S ++ I G C+ G +KA L +M K + P + +L+ LS +++
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465
Query: 434 NTSFIRLVDQ 443
+ F +++ +
Sbjct: 466 DDLFEKIIRE 475
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L +M I PD V Y ++ G + +A EL E+ G+ PD +YN I+
Sbjct: 500 AFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLIS 559
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G K+ ++ + M +G P ++TYN L+Q LCK ++ + EL+KEM KGI
Sbjct: 560 GYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITP 619
Query: 345 NLQTYSIMIDGLASKGDIIEA 365
+ TY +I+G+ D EA
Sbjct: 620 DDSTYFSLIEGIGKVDDSSEA 640
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 89/174 (51%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A E FD + G+VP + T+N ++ K N E + A M L K V T+N ++
Sbjct: 185 AFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMIN 244
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK +L + ++ + M+ G+ N+ TY+ +I G S+G + A +L+ N+G+
Sbjct: 245 VLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEP 304
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
S + I G+C+ G + +A +L++M + + P A + L+ +K D V
Sbjct: 305 DSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLV 358
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 27/194 (13%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGK-TCSLI 175
+ LI + +R + + +LF KI R G + +++ N +I DG C +G +
Sbjct: 449 YTSLIYVLSKRNRMKAADDLFEKII-----REGASPDLIMFNALI-DGHCANGNLDRAFA 502
Query: 176 LSSVCEQRDLSSDELL------------------GFVQEMKKLGFCFGMVDYTNVIRSLV 217
L ++R++ DE+ ++EMK+ G + Y +I
Sbjct: 503 LLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYS 562
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K+ + DA I ++M S G P ++ Y ++ G+ + AEEL E++ G+ PD
Sbjct: 563 KRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDS 622
Query: 278 TYNVYINGLCKQNN 291
TY I G+ K ++
Sbjct: 623 TYFSLIEGIGKVDD 636
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 149/306 (48%), Gaps = 6/306 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ L +I GF VD + +L +C + +SD + ++ M +LG
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR-TSDAMDIVLRRMTELGCIPN 157
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y +++ L + + +AL +L+ M D G PD+V YT V+NG + D KA
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ E+L G++PDV TYN I LCK ++ ++++ M + G PD +TYN++L C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ +K+M+ G+ ++ TYS+++D L G +EA + + +GL + +
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
+ + G +G + + LL M + P V+ L+ ++ K+D F ++
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397
Query: 441 VDQILN 446
Q LN
Sbjct: 398 RQQGLN 403
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 130/306 (42%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+LN M+ +G D T + IL C E +GF+++M+ G +V Y+ +
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSG--QPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A I + M G+KP+I Y +L G + V+ L D ++ G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 273 VPDVY-----------------------------------TYNVYINGLCKQNNVEAGIK 297
PD Y TY I LCK VE +
Sbjct: 368 HPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M + G P I YN+L+ LC + R EL+ EM +GI LN ++ +ID
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+G +IE+ L E + G+ ++ I G C G + +A++LL M + P
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 418 VWEALL 423
+ L+
Sbjct: 548 TYSTLI 553
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 20/307 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S + +P Y +++ A ++ +LD + R ++F LI Y
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD-LMVRNGIHPDHYVFSILICAY 381
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
A+ + ++ +F K+ + +N RV A+ MI++G
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+ ++ +C E L + EM G C + + ++I S K+ +V ++ +
Sbjct: 442 IVYNSLIHGLCTCNKWERAEEL--ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M G+KP+++ Y ++NG + +A +L ++ +GL P+ TY+ ING CK
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ +E + + ME G PD+ITYN +LQ L + R +EL + G + L TY
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 350 SIMIDGL 356
+I++ GL
Sbjct: 620 NIILHGL 626
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 19/267 (7%)
Query: 149 RVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
R+G ++ N +IN G+C+ GK DE + + M +G
Sbjct: 504 RIGVKPNVITYNTLIN-GYCLAGKM----------------DEAMKLLSGMVSVGLKPNT 546
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ +I K ++ DAL + +M+S G+ PDI+ Y ++L G+ A+EL+
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G ++ TYN+ ++GLCK + ++M + + K + T+N ++ AL KV
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ ++L G+V N TY +M + + +G + E L + G S M +
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Query: 387 TICGLCQRGLVRKALELLKQMADKDVS 413
+ L QRG + +A L + +K S
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFS 753
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D T + I++++C+ + + D+ + + M K G + Y +++
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAM--DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A+G L +M+SDG++PD+V Y+++++ + ++A ++FD + GL P++ TY
Sbjct: 280 GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ G + + ++ M G PD ++ L+ A ++++ + +M+
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQ 399
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ N TY +I L G + +A E+ +++GL + +++ I GLC +
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 400 ALELLKQMADKDV 412
A EL+ +M D+ +
Sbjct: 460 AEELILEMLDRGI 472
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 39/191 (20%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIA---------------------C--------- 301
+ PD+ TY + I C+ ++ G + C
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 302 ------MEELGSKPDVITYNTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
M ELG P+V +YN LL+ LC + +E L ++ + + G ++ +Y+ +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G +GD +A E L++G+ ++ I LC+ + KA+E+L M V
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 413 SPGARVWEALL 423
P + ++L
Sbjct: 263 MPDCMTYNSIL 273
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I+R+ A+ + M + G D T ++IL + + R ++ + L +V+ + + G
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL-YVR-ITESGTQIE 615
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++ L K + DAL + + +K + + ++++ ++ +A++LF
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
GLVP+ +TY + + Q +E ++ ME+ G D N +++ L +
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
E+ R + + K L T S+ ID L+
Sbjct: 736 EITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 2/266 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A+E+ N M+N G D T ++ C +L + L +M +LGF +
Sbjct: 248 RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL--EMALRITHDMIRLGFVPSEAN 305
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +I L KKE V +A + ++ G+ P++ Y +++ + E + A+ LF E+
Sbjct: 306 CSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA 365
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P+ TY + I+ LCK+ +E + + M + G K V YN+L+ CK L+
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R R L+ M +G+ +YS +I GL GD+ A L E +G+ + F I
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALI 485
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
G C+ + +A L +M D +V P
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIP 511
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 7/289 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A+ I + MI GF CS ++ + +++L +E ++ LG
Sbjct: 280 RMEELEMALRITHDMIRLGFVPSEANCSFMIDEL-RKKELV-EEAFSLACKLGDLGMVPN 337
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I L K E+ DA + +M G++P+ V Y ++++ + + A LFD
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ VY YN ING CKQ +++ +++ M + G P +Y+ L+ LC+
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L+ EL +EM +GI N T++ +I+G + EA L ++ ++ + F+
Sbjct: 458 DLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL-----LLSSVSK 429
I G C G +RKA +L QM + + P + +L L S VSK
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I + A ++ + M+ G +D + + + CE R+L D G V M+ G
Sbjct: 175 KIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL--DGARGLVVRMESEGVKAS 232
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ L K +V +A+ + N M + G+ D V Y ++ G E+ A +
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITH 292
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ LG VP + I+ L K+ VE + + +LG P+V YN L+ LCK
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNE 352
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L KEM +G+ N TY+I+I L +G I +A L ++ +KG+ ++
Sbjct: 353 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYN 412
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C++G + +A LL M + ++P A + L+
Sbjct: 413 SLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 173/382 (45%), Gaps = 32/382 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLD-HIEKRE-NFETPEFIFIDLIKTYADAHRFQDS 135
P +Y +I L N D+SS ++ H E E + F LI + + ++
Sbjct: 441 PTAASYSPLIAGLCRNG---DLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 136 VNLFYKIPKFRI--NRVGF---------------AIEILNCMINDGFCVDGKTCSLILSS 178
LF K+ + N V F A ++ + M+ G D T ++S
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C +S FV +++ T ++ L ++ + + + ++M G+K
Sbjct: 558 LCLTSGVSKAN--EFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVK 615
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
D+V +T+++ + Q D K+ LF E+ G+ PD Y I+ L K+ N+ I+
Sbjct: 616 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM---IQA 672
Query: 299 IACMEEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ C +++ G P+ +T+ L+ LCK L L KEM ++ N TY+ +D
Sbjct: 673 LNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDY 732
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
A++GD +E L A+ +G F+ I GLC+ G +++A++L++++ + SP
Sbjct: 733 FATEGD-MEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPD 791
Query: 416 ARVWEALLLSSVSKLDFVNTSF 437
+ + ++ + K+ +N +F
Sbjct: 792 C-ISYSTIIHELCKMGDINKAF 812
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 144/337 (42%), Gaps = 21/337 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AY+ +I L +N +F D + + R E E + LI +D++
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKRGMIEDALC 394
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
LF K R + + N +IN G+C G S D G + M
Sbjct: 395 LF---DKMRDKGIKVTVYPYNSLIN-GYCKQG----------------SLDRARGLLSGM 434
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K G Y+ +I L + + A+ + +M GI + +T ++NG +
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKM 494
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A LFD+++ ++P+ T+NV I G C N+ ++ M E+G KPD TY +L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LC +++ E V +++ VLN + + ++ GL +G E L +E +G+
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGV 614
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
F + ++ K+ L ++M ++ V P
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 40/310 (12%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
EF+ DL +YA + F + L Y + FR R + + M G +D + ++I
Sbjct: 569 EFV-ADLENSYAVLNNFSLTA-LLYGL--FREGRFTETYHLWDEMAVRGVKLDLVSFTII 624
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ + +Q D +L +EMK+ G + YT +I +L K+E + AL +QM D
Sbjct: 625 VYAALKQHDKEKSCVL--FREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVID 682
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY------------- 282
G P+ V +T+++N + AE L E+L ++P+ +TYN +
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742
Query: 283 ---------------------INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
I GLCK ++ I ++ + E G PD I+Y+T++ L
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHEL 802
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK+ ++N+ EL EM +KG+ ++ Y+I I G+ +A G+ + G+
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862
Query: 382 SMFDETICGL 391
+ + G+
Sbjct: 863 DTYRALLSGI 872
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 1/220 (0%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ ++ SLVK + A + ++M G+ D YT + + A L +
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ YNV + GLCK V+ +++ M +G D +TY TL+ C++ EL
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ +M G V + S MID L K + EA L + + G+ ++ I
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
LC+ A L K+MA + + P V A+L+ ++ K
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPN-EVTYAILIHALCK 385
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L S GI + + +L ++ + A +LFD++L G+ D Y Y I C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ N++ ++ ME G K + YN L+ LCK + E+ M G+ +
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY ++ G ++ A + + + G + I L ++ LV +A L ++
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329
Query: 408 ADKDVSPGARVWEALL 423
D + P + AL+
Sbjct: 330 GDLGMVPNVFAYNALI 345
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 154 IEILNC---MINDGFCVDGKTCSLILSSVCEQRDLSSDELL------GFVQEMKKLGFCF 204
I+ LNC M+ DG+ + T +++++++C+ L S ELL G V K CF
Sbjct: 670 IQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+DY + K + + A+ G IV + +++ G+ +A +L
Sbjct: 730 --LDYFATEGDMEKAKDLHSAM-------LQGHLASIVSFNILIKGLCKAGKIQEAIDLM 780
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G PD +Y+ I+ LCK ++ ++ M G KPDV+ YN ++ C V
Sbjct: 781 RKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR-WCNV 839
Query: 325 R-ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
E ++ + M G+ N TY ++ G++
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 141/292 (48%), Gaps = 3/292 (1%)
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
S N F+ P N + A+ N M++ + +L+S+ + + S+ LL
Sbjct: 34 LSSSHNTFHSKP-LHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHST--LL 90
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
++M G + VI SL +V A L ++ G +PD +T ++ G+
Sbjct: 91 SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL 150
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
V+ +A LFD+++ G P+V TY INGLCK N A I+++ ME+ +P+V
Sbjct: 151 CVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNV 210
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+ ++TL+ +LCK R++ + EM KGI N+ TY+ +I GL + L+ E
Sbjct: 211 VVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNE 270
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + + + LC+ G+V +A +++ M + V P + AL+
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 185/406 (45%), Gaps = 35/406 (8%)
Query: 46 LTTPP---TKQQQQIPKQPHILSSLLHSFSIYN----CEPPPEAYHF--VIKTLAENSQF 96
L+ PP + +P ++L + S +N +PPP F ++ ++A+
Sbjct: 27 LSLPPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH 86
Query: 97 CDISSVLDHIEKRENFETP-------------------EFIFIDLIKTYADAHRFQDSVN 137
S++L + ++F P +F F L K H+ D+
Sbjct: 87 ---STLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQ-PDATT 142
Query: 138 LFYKIPKFRI-NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
I + ++G A+ + + MI +GF + T +++ +C+ + S+ + ++
Sbjct: 143 FTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSA--AIRLLRS 200
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M++ +V ++ +I SL K +V +A I ++M + GI P+IV Y +++G+ +
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ L +E++ ++PDV+T N ++ LCK+ V ++ M G +P+V+TYN
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ C E++ ++ M K V N+ +Y+ +I+G + +A L EE +
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
L + ++ I GLC G ++ A+ L +M + P + L
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 426
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 2/259 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
++N M++ D T + ++ ++C++ ++ E V M G +V Y ++
Sbjct: 267 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVA--EAHDVVDMMIHRGVEPNVVTYNALMDG 324
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ +V A+ + + M +++ Y ++NG + KA LF+E+ L P+
Sbjct: 325 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 384
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TYN I+GLC ++ I + M G PD++TY TL LCK R L++ L+K
Sbjct: 385 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK 444
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
++ ++Q Y+ ++DG+ G++ +A L +KGL ++ I GLC++G
Sbjct: 445 AIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQG 504
Query: 396 LVRKALELLKQMADKDVSP 414
L+ +A +L +M SP
Sbjct: 505 LLAEASKLFSEMNKNGCSP 523
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 10/213 (4%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I K + V A+ + +M + P+ V Y +++G+ A LF
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G +PD+ TY + LCK +++ + ++ +E PD+ Y T+L +C+
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAG 469
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
EL R+L + KG+ N+ TY+IMI GL +G + EA L E +NK C+ +
Sbjct: 470 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE-MNKNGCSP----N 524
Query: 386 ETICGLCQRGLVR-----KALELLKQMADKDVS 413
+ L RG +R + +ELL++M + S
Sbjct: 525 DCTYNLITRGFLRNNEALRTIELLEEMLARGFS 557
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+ + EM G +V Y + L K + A+ +L ++ PDI YT +L
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G+ + A +LF L GL P+V+TYN+ I+GLCKQ + K+ + M + G
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 522
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
P+ TYN + + + E R EL++EM +G +++ T ++++ L+ G
Sbjct: 523 PNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 114/257 (44%), Gaps = 2/257 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N V A+++ + M++ + + + +++ C+ + S D+ + +EM + V
Sbjct: 329 NEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQ--SVDKAMYLFEEMSRQELTPNTV 386
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L ++ DA+ + ++M + G PD+V Y + + + KA L +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PD+ Y ++G+C+ +E + + + G +P+V TYN ++ LCK L
Sbjct: 447 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 506
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+L EM G N TY+++ G + + LLEE L +G S
Sbjct: 507 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLL 566
Query: 388 ICGLCQRGLVRKALELL 404
+ L GL + ++L
Sbjct: 567 VGMLSDDGLDQSVKQIL 583
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R A+++L M D T S I+ S+C RD D + +EM+ G
Sbjct: 195 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC--RDGCIDAAISLFKEMETKGIKSS 252
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +++R L K K D +L M S I P+++ + ++L+ + + +A EL+
Sbjct: 253 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 312
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G+ P++ TYN ++G C QN + M+ M PD++T+ +L++ C V+
Sbjct: 313 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 372
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ ++ + + +G+V N TYSI++ G G I A L +E ++ G+ +
Sbjct: 373 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 432
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC G + KALE+ + + + G ++ ++
Sbjct: 433 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 470
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 17/280 (6%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
+ +N + I LN MIN FC KTC + +LG V KLG+
Sbjct: 103 QLELNGIAHNIYTLNIMIN-CFCRCCKTCF-------------AYSVLGKVM---KLGYE 145
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ +I+ L + KV +A+ ++++M +G +PD+V Y ++NG+ D A +L
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 205
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++ + DV+TY+ I+ LC+ ++A I + ME G K V+TYN+L++ LCK
Sbjct: 206 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 265
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ N L+K+M + IV N+ T+++++D +G + EA L +E + +G+
Sbjct: 266 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 325
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + G C + + +A +L M SP + +L+
Sbjct: 326 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 118/240 (49%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D+ D+ + QEM + +VD++ ++ + ++ L Q++ +GI +I
Sbjct: 56 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 115
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+++N A + +++ LG PD T+N I GL + V + ++ M
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G +PDV+TYN+++ +C+ + + +L+++M+ + + ++ TYS +ID L G I
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A L +E KG+ + ++ + GLC+ G LLK M +++ P + LL
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 118/234 (50%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+L F ++++ G + +I + K A +L ++ G +PD + ++
Sbjct: 97 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 156
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ ++ +A L D ++ G PDV TYN +NG+C+ + + ++ MEE K
Sbjct: 157 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 216
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DV TY+T++ +LC+ ++ L KEM+ KGI ++ TY+ ++ GL G + LL
Sbjct: 217 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 276
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ +++ + F+ + + G +++A EL K+M + +SP + L+
Sbjct: 277 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 330
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 134/281 (47%), Gaps = 5/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ MI G + T + ++ C Q LS E + M + +V +T++
Sbjct: 307 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLS--EANNMLDLMVRNKCSPDIVTFTSL 364
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ ++V D + + + G+ + V Y++++ G AEELF E++ G+
Sbjct: 365 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 424
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDV TY + ++GLC +E +++ +++ ++ Y T+++ +CK ++
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L + KG+ N+ TY++MI GL KG + EA LL + G ++ I
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEA---LLLSSVSKL 430
+ G + + +L+++M S A + +LLS++ +L
Sbjct: 545 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRL 585
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAI---------------E 155
+P+ + F LIK Y R D + +F I K + N V ++I E
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ M++ G D T ++L +C+ L ++ L ++++K G+V YT +I
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKL--EKALEIFEDLQKSKMDLGIVMYTTIIEG 472
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ K KV DA + + G+KP+++ YT++++G+ + +A L ++ G P+
Sbjct: 473 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 532
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
TYN I + ++ A K+I M+ G D + ++ L
Sbjct: 533 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 100/219 (45%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G V + +RS + K DA+ + +M P +V ++ + + + + +
Sbjct: 42 GNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFC 101
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+L + G+ ++YT N+ IN C+ ++ + +LG +PD T+NTL++ L
Sbjct: 102 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 161
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+++ LV M G ++ TY+ +++G+ GD A LL + + + +
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 221
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC+ G + A+ L K+M K + + +L+
Sbjct: 222 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V AEEL E++ G+ P+ TY+ I+G CK+N ++ +M+ M G
Sbjct: 716 VTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 6/306 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ L +I GF VD + +L +C + +SD + ++ M +LG
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR-TSDAMDIVLRRMTELGCIPN 157
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y +++ L + + +AL +L+ M D G PD+V YT V+NG + D KA
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ E+L G++PDV TYN I LCK ++ ++++ M + G PD +TYN++L C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ +K+M+ G+ ++ TYS+++D L G +EA + + +GL + +
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV--SKLDFVNTSFIRL 440
+ + G +G + + LL M + P V+ L+ + K+D F ++
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 441 VDQILN 446
Q LN
Sbjct: 398 RQQGLN 403
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+LN M+ +G D T + IL C E +GF+++M+ G +V Y+ +
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSG--QPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A I + M G+KP+I Y +L G + V+ L D ++ G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD Y +++ I KQ V+ + + + M + G P+ +TY ++ LCK +
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++M +G+ Y+ +I GL + A L+ E L++G+C + F+ I C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V ++ +L + M V P + L+
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 137/307 (44%), Gaps = 20/307 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S + +P Y +++ A ++ +LD + R ++F LI Y
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD-LMVRNGIHPDHYVFSILICAY 381
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
A + ++ +F K+ + +N RV A+ MI++G
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+ ++ +C E L + EM G C + + ++I S K+ +V ++ +
Sbjct: 442 IVYNSLIHGLCTCNKWERAEEL--ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M G+KP+++ Y ++NG + +A +L ++ +GL P+ TY+ ING CK
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ +E + + ME G PD+ITYN +LQ L + R +EL + G + L TY
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 350 SIMIDGL 356
+I++ GL
Sbjct: 620 NIILHGL 626
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 19/267 (7%)
Query: 149 RVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
R+G ++ N +IN G+C+ GK DE + + M +G
Sbjct: 504 RIGVKPNVITYNTLIN-GYCLAGKM----------------DEAMKLLSGMVSVGLKPNT 546
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ +I K ++ DAL + +M+S G+ PDI+ Y ++L G+ A+EL+
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G ++ TYN+ ++GLCK + ++M + + K + T+N ++ AL KV
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ ++L G+V N TY +M + + +G + E L + G S M +
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Query: 387 TICGLCQRGLVRKALELLKQMADKDVS 413
+ L QRG + +A L + +K S
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFS 753
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D T + I++++C+ + + D+ + + M K G + Y +++
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAM--DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A+G L +M+SDG++PD+V Y+++++ + ++A ++FD + GL P++ TY
Sbjct: 280 GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ G + + ++ M G PD ++ L+ A K ++++ + +M+
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ N TY +I L G + +A E+ +++GL + +++ I GLC +
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 400 ALELLKQMADKDV 412
A EL+ +M D+ +
Sbjct: 460 AEELILEMLDRGI 472
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 39/191 (20%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIA---------------------C--------- 301
+ PD+ TY + I C+ ++ G + C
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 302 ------MEELGSKPDVITYNTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
M ELG P+V +YN LL+ LC + +E L ++ + + G ++ +Y+ +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G +GD +A E L++G+ ++ I LC+ + KA+E+L M V
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 413 SPGARVWEALL 423
P + ++L
Sbjct: 263 MPDCMTYNSIL 273
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I+R+ A+ + M + G D T ++IL + + R ++ + L +V+ + + G
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL-YVR-ITESGTQIE 615
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++ L K + DAL + + +K + + ++++ ++ +A++LF
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
GLVP+ +TY + + Q +E ++ ME+ G D N +++ L +
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
E+ R + + K L T S+ ID L+
Sbjct: 736 EITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 131/249 (52%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I+ +C+ + + D+ L +EM+ G +V Y+++I L + DA +L+ M
Sbjct: 262 IIDGLCKYKHM--DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
I PD+ ++ +++ + + V+AE+L+DE++ + P + TY+ ING C + ++
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+M M PDV+TYNTL++ CK + + E+ +EM +G+V N TY+I+I
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL GD A + +E ++ G+ ++ + GLC+ G + KA+ + + + + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 415 GARVWEALL 423
+ ++
Sbjct: 500 TIYTYNIMI 508
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N G + T S++++ C + L L + +M KLG+
Sbjct: 93 KMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPL--ALAVLGKMMKLGYEPN 150
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++++ +++ +A+ +++QM G +P+ V + +++G+ + +A L D
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 210
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G PD+ TY V +NGLCK+ + + ++ ME+ +P V+ YNT++ LCK +
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L KEM+ KGI N+ TYS +I L + G +A LL + + + + F
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 330
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G + +A +L +M + + P + +L+
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 139/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ + T S +L+ C + +S E + V +M G+
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS--EAVALVDQMFVTGYQPN 185
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V + +I L K +A+ ++++M + G +PD+V Y +V+NG+ + D A L +
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ L P V YN I+GLCK +++ + + ME G +P+V+TY++L+ LC
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I ++ T+S +ID +G ++EA L +E + + + +
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A ++ + M K P + L+
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 39/335 (11%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P Y +I L ++ D S +L D IE++ N + F F LI + + ++
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV--FTFSALIDAFVKEGKLVEA 345
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCV---------------------DGKTCSL 174
L+ ++ K I+ +I + +IN GFC+ D T +
Sbjct: 346 EKLYDEMVKRSIDP---SIVTYSSLIN-GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ C+ + + +E + +EM + G V Y +I+ L + A I +M S
Sbjct: 402 LIKGFCKYKRV--EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
DG+ P+I+ Y +L+G+ KA +F+ L + P +YTYN+ I G+CK VE
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
G + + G KPDV+ YNT++ C+ L KEMK G + N Y+ +I
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 355 GLASKGDI---------IEACGLLEEALNKGLCTQ 380
GD + +CG +A GL T
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 170/394 (43%), Gaps = 60/394 (15%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C+P Y V+ L + ++L+ +E+ + E I+ +I D
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDD 274
Query: 135 SVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG 192
++NLF ++ R N V ++ +++C+ N G D S +LS + E R ++ D
Sbjct: 275 ALNLFKEMETKGIRPNVVTYS-SLISCLCNYGRWSDA---SRLLSDMIE-RKINPD---- 325
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ ++ +I + VK+ K+ +A + ++M I P IV Y+ ++NG
Sbjct: 326 -------------VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG------ 306
+ + +A+++F+ ++ PDV TYN I G CK VE G+++ M + G
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 307 -----------------------------SKPDVITYNTLLQALCKVRELNRLRELVKEM 337
P+++TYNTLL LCK +L + + + +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ + + TY+IMI+G+ G + + L KG+ ++ I G C++G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+A L K+M + P + + L+ + + D
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 115/240 (47%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+L D+ + EM K +++++ ++ ++ K K + + QM++ GI +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y++++N + A + +++ LG P++ T + +NG C + + ++ M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G +P+ +T+NTL+ L + + L+ M KG +L TY ++++GL +GD
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL + L +++ I GLC+ + AL L K+M K + P + +L+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 104/210 (49%)
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R+ + + K+ DA+ + +M P I+ ++ +L+ + + L +++ LG+
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
+ YTY++ IN C+++ + + ++ M +LG +P+++T ++LL C + ++ L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V +M G N T++ +I GL EA L++ + KG + + GLC+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
RG A LL +M + PG ++ ++
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 172/369 (46%), Gaps = 43/369 (11%)
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK-IPK 144
+I+ A F + +L I + EN E FI + + Y AH + +V+LF++ + +
Sbjct: 83 MIENYANLGDFASVEKLLSRI-RLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDE 141
Query: 145 FRINR-VGFAIEILNCMINDGF--------------------CVDGKTCSLILSSVCEQR 183
FR R V +LN +IN+G +G + +L++ ++C+
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK-- 199
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVD---------YTNVIRSLVKKEKVFDALGILNQMKS 234
LGFV + + GM + Y ++ L K+E++ +A+ +L++M+S
Sbjct: 200 -------LGFVD--RAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+G P V Y ++++G+ + D + +L D + + G P+ TYN I+GLC + ++
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDK 310
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ M P+ +TY TL+ L K R L+ M+ +G LN YS++I
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLIS 370
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL +G EA L ++ KG ++ I GLC+ G +A E+L M P
Sbjct: 371 GLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLP 430
Query: 415 GARVWEALL 423
+ +L+
Sbjct: 431 NVYTYSSLM 439
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 169/376 (44%), Gaps = 43/376 (11%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C P Y +I L + + D + +L +E+R + + I+ LI
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEER-GYRLNQHIYSVLISG 371
Query: 126 YADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+ ++++ L+ K+ + R N V ++ I DG C +GK
Sbjct: 372 LFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVI------DGLCREGKP------------ 413
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+E + M G + Y+++++ K +A+ + +M G + C
Sbjct: 414 ----NEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFC 469
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM---IA 300
Y+++++G+ +A ++ ++L +G+ PD Y+ I GLC +++A +K+ +
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEML 529
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
C EE S+PDV+TYN LL LC ++++R +L+ M +G ++ T + ++ L+ K
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKS 589
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
D E S +E + L +R V A ++++ M K ++P W
Sbjct: 590 DSCE--------------EGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTW- 634
Query: 421 ALLLSSVSKLDFVNTS 436
A+++ + K +N +
Sbjct: 635 AMIVPEICKPKKINAA 650
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 154/355 (43%), Gaps = 32/355 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL C P P Y+ +I L + ++ ++D++ + F E + LI
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPN-EVTYNTLIHGL 302
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ +V+L ++ + C+ ND +LI V ++R +
Sbjct: 303 CLKGKLDKAVSLLERMVSSK------------CIPNDV-----TYGTLINGLVKQRRAMD 345
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
LL M++ G+ Y+ +I L K+ K +A+ + +M G +P+IV Y+
Sbjct: 346 GARLL---ISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSA 402
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ + +A+E+ + ++ G +P+VYTY+ + G K E I++ M+E G
Sbjct: 403 VIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETG 462
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+ Y+ L+ LC V + + +M GI + YS MI GL G + A
Sbjct: 463 CSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAAL 522
Query: 367 GLLEEAL-------NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L E L + T + + D GLC + V +A++LL M D+ P
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLD----GLCMQKDVSRAVDLLNCMLDRGCDP 573
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 132/285 (46%), Gaps = 4/285 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A+ +L+ M ++G ++++ +C++ DLS + V M G V
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLS--RVTKLVDNMFLKGCFPNEVT 294
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K+ A+ +L +M S P+ V Y ++NG++ Q + L +
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISME 354
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G + + Y+V I+GL K+ E + + M E G +P+++ Y+ ++ LC+ + N
Sbjct: 355 ERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPN 414
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+E++ M G + N+ TYS ++ G G EA + E G + I
Sbjct: 415 EAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLI 474
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
GLC G V++A+ + +M + P + +++ L + +D
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMD 519
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 149/279 (53%), Gaps = 4/279 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G + T ++++ ++C + L +E +G V +M+ G V Y ++ + +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRL--EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRA 58
Query: 220 EKVFDALGILNQMKSDG-IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
++ A +++ M+ +G KP++V + ++NG+ A ++FDE++ GL PDV +
Sbjct: 59 GELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN ++G CK + + + + M + G PDV+T+ +L+ A CK L + LV +M+
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+G+ +N T++ +IDG KG + +A +EE G+ ++ I G C+ G +
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
A EL+++M K V P + + ++S K+ ++++F
Sbjct: 239 LARELIREMEAKRVKPDVVTY-STIISGYCKVGNLDSAF 276
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 175/375 (46%), Gaps = 20/375 (5%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y+ ++ + V+ + + N + F ++ A R +
Sbjct: 40 GCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEG 99
Query: 135 SVNLFYKIPKFRIN--------------RVGF---AIEILNCMINDGFCVDGKTCSLILS 177
+ +F ++ + + +VG ++ + + M G D T + ++
Sbjct: 100 ARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 159
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+ C+ +L ++ + V +M++ G V +T +I KK + DAL + +M+ GI
Sbjct: 160 ATCKAGNL--EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 217
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P +VCY ++NG A EL E+ + PDV TY+ I+G CK N+++ +
Sbjct: 218 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 277
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M + G PD ITY++L++ LC+ + LN EL + M G+ + TY+ +IDG
Sbjct: 278 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 337
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+G++ +A L +E + KG+ + I GL + ++A LL ++ +D P
Sbjct: 338 KEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 397
Query: 418 VWEALLLSSVSKLDF 432
++AL+L SK +F
Sbjct: 398 KYDALML-CCSKAEF 411
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 40/327 (12%)
Query: 115 PEFI-FIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKT 171
P+ + F LI A + +V L ++ + R+N V F I DGFC
Sbjct: 149 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI------DGFC----- 197
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
++ D LL V+EM+K G +V Y +I K ++ A ++ +
Sbjct: 198 ----------KKGFLDDALLA-VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 246
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M++ +KPD+V Y+ +++G + A +L ++L G++PD TY+ I GLC++
Sbjct: 247 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 306
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ ++ M +LG +PD TY TL+ CK + + L EM KG++ ++ TYS+
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 366
Query: 352 MIDGLASKGDIIEACGLLEEALNKG------------LCTQSSMFDETIC---GLCQRGL 396
+I+GL+ EA LL + ++ LC + F + G C +GL
Sbjct: 367 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 426
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
+++A ++ + M D++ V+ L+
Sbjct: 427 MKEADKVYQSMLDRNWKLDGSVYSILI 453
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 114/271 (42%), Gaps = 54/271 (19%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A E++ M D T S I+S C+ +L D Q+M K G
Sbjct: 233 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL--DSAFQLNQKMLKKGVLPD 290
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+++IR L +++++ DA + M G++PD YT +++G + + KA L D
Sbjct: 291 AITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHD 350
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G++PDV TY+V INGL K + +++ + PD I Y+ L+ C
Sbjct: 351 EMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLC-CSKA 409
Query: 326 ELNRLRELVKEMKWKGIV----------------LNLQTYSIMIDG-------------- 355
E + L+K KG++ L+ YSI+I G
Sbjct: 410 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 469
Query: 356 ---------------------LASKGDIIEA 365
L +G ++EA
Sbjct: 470 KQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 153/319 (47%), Gaps = 27/319 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV--------------GFAIE 155
++F LI Y ++ +D++ + +++P +V GF E
Sbjct: 67 YVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEE 126
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
L C G+ ++++ S C++ ++ + + K G +V + ++
Sbjct: 127 SLEC----GYPASLYFFNILMHSFCKEGEIRLAQ--SVFDAITKWGLRPSVVSFNTLMNG 180
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+K + + + N M++ G++PD+ Y++++NG+ + A ELFDE+L GLVP+
Sbjct: 181 YIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPN 240
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
++ I+G CK V+ +++ M PD+ITYNTL+ LCK +L + ++L+
Sbjct: 241 SVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLIN 300
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG+ + TY+ +IDG +GD+ A + + + + + I GLCQ G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG 360
Query: 396 LVRKALELLKQMADKDVSP 414
A ++L++M + P
Sbjct: 361 RSVDAEKMLREMLSVGLKP 379
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ +FD + GL P V ++N +NG K ++ G ++ M+ G +PDV TY+ L+
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK +L+ EL EM G+V N +++ +IDG G + A + ++ L++ L
Sbjct: 215 GLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSP 274
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I GLC+ G +++A +L+ +M+ K + P + L+ S + D + T+F
Sbjct: 275 DLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGD-LETAF 331
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ L D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKL--DDANELFDEMLDNGLVPNSVSFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ D +A++L +E+ +
Sbjct: 246 TLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ L++E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 411
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++G + + + ++ C +D D + ++M ++ Y +
Sbjct: 225 ANELFDEMLDNGLVPNSVSFTTLIDGHC--KDGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K + A ++N+M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G V ++ T
Sbjct: 403 LMKEMQRDGYVPSVVT 418
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ +CM +DG D L++SS L S + F+ E+ G Y N++
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAK--NFLNEVHCYGIKVSPFVYNNLLNM 188
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
LVK+ V +A+ + + PD+ + +++ G+ + KA E F + G PD
Sbjct: 189 LVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPD 248
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEEL---GSKPDVITYNTLLQALCKVRELNRLRE 332
+ +YN ING C+ N + G ++ E++ G PDVITY +++ CK+ ++ E
Sbjct: 249 IVSYNTLINGFCRVNEISKGHDLLK--EDMLIKGVSPDVITYTSIISGYCKLGDMKAASE 306
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM GI N T++++IDG G++ A + E+ L G F I G C
Sbjct: 307 LFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYC 366
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V + L+L ++M +++SP + L+
Sbjct: 367 REGEVNQGLKLWEEMKVRNLSPNVYTYAVLI 397
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 146/282 (51%), Gaps = 7/282 (2%)
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVF 223
F D + ++++ +C ++ D+ F Q M G CF +V Y +I + ++
Sbjct: 210 FVPDVYSFNILIRGLCRIGEI--DKAFEFFQNMGNFG-CFPDIVSYNTLINGFCRVNEIS 266
Query: 224 DALGILNQ-MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+L + M G+ PD++ YT +++G D A ELFDE++ G+ P+ +T+NV
Sbjct: 267 KGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVL 326
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+G K N+ + + M M LG PDV+T+ +L+ C+ E+N+ +L +EMK + +
Sbjct: 327 IDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNL 386
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
N+ TY+++I+ L + I EA L + + + +++ I G C+ G V +A
Sbjct: 387 SPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANF 446
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSKLDFVN--TSFIRLVD 442
++ +M +K P + L++ + K V ++F ++++
Sbjct: 447 IVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE 488
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 21/238 (8%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ S + K+ A LN++ GIK Y +LN ++ Q +A LF E L
Sbjct: 150 LVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY 209
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
VPDVY++N+ I GLC+ ++ + M G PD+++YNTL+ C+V E+++
Sbjct: 210 FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH 269
Query: 332 ELVKE-MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+KE M KG+ ++ TY+ +I G GD+ A L +E ++ G+ F+ I G
Sbjct: 270 DLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329
Query: 391 LCQRGLVRKALELLKQM--------------------ADKDVSPGARVWEALLLSSVS 428
+ G +R A+ + ++M + +V+ G ++WE + + ++S
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS 387
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 127/269 (47%), Gaps = 1/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI + A E M N G D + + +++ C ++S L ++M G
Sbjct: 226 RIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL-LKEDMLIKGVSPD 284
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT++I K + A + ++M S GIKP+ + ++++G + A +++
Sbjct: 285 VITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYE 344
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++L+LG +PDV T+ I+G C++ V G+K+ M+ P+V TY L+ ALCK
Sbjct: 345 KMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKEN 404
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ R ++ +K +V Y+ +IDG G + EA ++ E K F
Sbjct: 405 RIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFT 464
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I G C +G + +A+ +M + + P
Sbjct: 465 ILIIGNCMKGRMVEAISTFYKMIEINCVP 493
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M+ G D T + I+S C+ D+ ++ EL EM G + +I K
Sbjct: 276 MLIKGVSPDVITYTSIISGYCKLGDMKAASELF---DEMVSSGIKPNDFTFNVLIDGFGK 332
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ A+ + +M G PD+V +T +++G + + + +L++E+ V L P+VYT
Sbjct: 333 VGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y V IN LCK+N + + ++ P YN ++ CK +++ +V EM+
Sbjct: 393 YAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
K + T++I+I G KG ++EA + + + I L + G+
Sbjct: 453 EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPN 512
Query: 399 KALELLKQMADKDVSPG 415
+A + +KQ A + ++ G
Sbjct: 513 EASQ-IKQAALQKLNLG 528
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 130/251 (51%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S ++ S+C+ R D+ L EM+ G ++ Y+++I L E+ DA +L+ M
Sbjct: 264 STVIDSLCKYR--HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I P++V + +++ + + V+AE+L+DE++ + PD++TY+ ING C + +
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ M M P+V+TYNTL+ CK + ++ EL +EM +G+V N TY+ +
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G D A + ++ ++ G+ ++ + GLC+ G + KA+ + + + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 413 SPGARVWEALL 423
P + ++
Sbjct: 502 EPTIYTYNIMI 512
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ T S +L+ C + +S + + V +M ++G+
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS--DAVALVDQMVEMGYRPD 189
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I L K +A+ ++++M G +P++V Y +V+NG+ + D A L +
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + +V Y+ I+ LCK + + + + ME G +P+VITY++L+ LC
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I N+ T++ +ID +G ++EA L +E + + + +
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A + + M KD P + L+
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 133/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++++ C + +S L + +M KLG+ +V ++++ +++ DA+ +++
Sbjct: 122 TYNILINCFCRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G +PD + +T +++G+ + +A L D ++ G P++ TY V +NGLCK+
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+++ ++ ME + +V+ Y+T++ +LCK R + L EM+ KG+ N+ TYS
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I L + +A LL + + + + F+ I + G + +A +L +M +
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 411 DVSPGARVWEALL 423
+ P + +L+
Sbjct: 360 SIDPDIFTYSSLI 372
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 129/271 (47%), Gaps = 4/271 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ + + D ++ ++M++LG + Y +I ++ ++ AL +L +M
Sbjct: 91 LLSAIAKMKKF--DLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +P IV + +LNG + A L D+++ +G PD T+ I+GL N
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ M + G +P+++TY ++ LCK +++ L+ +M+ I N+ YS +ID
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L +A L E NKG+ + I LC A LL M ++ ++P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 415 GARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ AL+ + V + V +L D+++
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAE--KLYDEMI 357
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 153/359 (42%), Gaps = 20/359 (5%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y+ +I SQ ++L + K +E L+ Y R D+V L +
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 142 IPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + F N+ A+ +++ M+ G + T ++++ +C++ D
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ D + +M+ +V Y+ VI SL K DAL + +M++ G++P+++ Y
Sbjct: 241 I--DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+ +++ + E + A L +++ + P+V T+N I+ K+ + K+ M +
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
PD+ TY++L+ C L+ + + + M K N+ TY+ +I+G I E
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E +GL + + I G Q A + KQM V P + LL
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 32/288 (11%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D IE++ N P + F LI + + +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN---PNVVTFNALIDAFVKEGKLVE 348
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCS 173
+ L+ ++ K I+ F L IN GFC+ + T +
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSL---IN-GFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+++ C+ + + DE + +EM + G V YT +I + +A + QM
Sbjct: 405 TLINGFCKAKRI--DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
SDG+ P+I+ Y +L+G+ KA +F+ L + P +YTYN+ I G+CK VE
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
G + + G KPDVI YNT++ C+ L ++M+ G
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 108/225 (48%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
F G DY ++R+ + K+ DA+G+ M P I + +L+ + + +
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L +++ LG+ ++YTYN+ IN C+++ + + ++ M +LG +P ++T ++LL
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C + ++ LV +M G + T++ +I GL EA L++ + +G
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + GLC+RG + A LL +M + ++ ++ S
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
Query: 211 NVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
N + S + K K FD + + +M+ GI ++ Y +++N + A L +++
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
LG P + T + +NG C + + ++ M E+G +PD IT+ TL+ L + +
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
LV M +G NL TY ++++GL +GDI A LL + + ++ I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ AL L +M +K V P + +L+
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 159/368 (43%), Gaps = 27/368 (7%)
Query: 71 FSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAH 130
F C P Y +I L + + +LD + R + +IK A
Sbjct: 21 FREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR-GIPPGVAVHNGVIKGLCKAG 79
Query: 131 RFQDSVNLFYKIP---------KFRI--------NRVGFAIEILNCMINDGFCVDGK-TC 172
RF D++ F + F I RV A +I M C+ T
Sbjct: 80 RFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTY 139
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ +++ +C +D D + + M + G C ++ Y+ ++ L K + +L +M
Sbjct: 140 TTVINGLC--KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G +PD++ Y +LNG+ +A EL ++ G P V TYN + C+ V
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++I M E G PDVI YNT++ LC+ L+ + L+K+M V ++ TYS +
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317
Query: 353 IDGLA------SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
IDGL + + AC +LE G + + I GLC+ ++AL LL++
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377
Query: 407 MADKDVSP 414
M D +V P
Sbjct: 378 MIDSEVVP 385
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 1/219 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMK-SDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ + ++ +LVK +V +A I M S P++V YT V+NG+ +A EL
Sbjct: 100 IITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL 159
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
D + G P+V TY+V + GLCK + G ++ M G +PDVI YNTLL LCK
Sbjct: 160 DLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKS 219
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R L+ ELV+ M G + TY+ +++ + A L++ +G +
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ + A LLKQM P + ++
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 3/224 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EIL M G + T ++++ +C R S + L ++ M + ++ V
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRAR--KSQQALALLRRMIDSEVVPDLSSFSMV 393
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K + A I M KP+ V Y +++G+ + KA +F EL+V
Sbjct: 394 IGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESF 452
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V TYN ++GLC +E ++M+ M PD +Y L++ LC+V + E
Sbjct: 453 RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYE 512
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L + ++ KG + + Y+++++ L K + +A G+ + + G
Sbjct: 513 LFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 15/287 (5%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +V A ++ M G D + +++ +C RD D+ +++M
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC--RDARLDDAQALLKQMVAARCVPD 310
Query: 206 MVDYTNVIRSLVKKEKV------FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
++ Y+ +I L K +V A IL MK G P+ Y +V+ G+ +
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A L ++ +VPD+ ++++ I LCK ++++A K+ M E KP+ + Y L+
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430
Query: 320 ALCKVRELN---RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L K E++ R+ EL+ E G+ TY+ ++DGL G I EA ++E ++K
Sbjct: 431 GLSKGGEVDKAVRVFELMVESFRPGVA----TYNSVLDGLCGVGRIEEAVRMVEGMIHKE 486
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + I GLC+ V +A EL + + K + V+ L+
Sbjct: 487 CFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 5/228 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQE----MKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
T S I+ +C+ + +D L E MK+ G Y VI L + K AL
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQAL 372
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+L +M + PD+ ++MV+ + D A ++F + P+ Y I+GL
Sbjct: 373 ALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGL 432
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
K V+ +++ M E +P V TYN++L LC V + +V+ M K +
Sbjct: 433 SKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG 491
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+Y +I GL + EA L + KG + +++ + LC++
Sbjct: 492 ASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKK 539
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 2/247 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A IL M DG C + T ++++ C +++S + EM + G +V Y ++
Sbjct: 199 ADAILKEMKADGICPNEVTFNILIDGFCNDKNVSV--AMKVFAEMNRQGVKPNVVTYNSL 256
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KV +A + +QM + ++P+I+ + +LNG + +A ELF+++ +
Sbjct: 257 INGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRI 316
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V TYN+ I+ CK N+E + M G PDV TYN L+ LC+ +L R
Sbjct: 317 TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARN 376
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
V EM K + +L TY+I++D L +KG++ + LL+E KGL ++ I G
Sbjct: 377 RVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYS 436
Query: 393 QRGLVRK 399
+ G +R+
Sbjct: 437 KEGNLRQ 443
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 156/340 (45%), Gaps = 10/340 (2%)
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN--LFYKIP 143
++ +LA ++ I S LD+ + + FIF I D+ + L +
Sbjct: 101 MLHSLAYAKKYSKIRSFLDNCVQNDKNYPVSFIF-HAISVSGDSFCANSIIVDILVWADA 159
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
K R+GF E + G + +C+ ++S + + +D +L +EMK G C
Sbjct: 160 KNLKTRLGF--EAFKRASDYGLKLSVTSCNPLMSGLVKM--YKADAIL---KEMKADGIC 212
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
V + +I + V A+ + +M G+KP++V Y ++NG+ +A L
Sbjct: 213 PNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTL 272
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
D+++ L P++ T+N +NG CK V+ ++ M + P+V TYN L+ A CK
Sbjct: 273 RDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCK 332
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ L + M KG+ ++ TY+ +I GL KGD+ A + E K L
Sbjct: 333 DENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLIT 392
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + LC +G ++K L LL +M K + P + ++
Sbjct: 393 YNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMI 432
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 118/224 (52%), Gaps = 2/224 (0%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
K++ A IL +MK+DGI P+ V + ++++G ++ A ++F E+ G+ P+V TYN
Sbjct: 195 KMYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYN 254
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
INGLC V + M +P++IT+N LL CK + + + EL ++M +
Sbjct: 255 SLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQ 314
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
I N+ TY+I+ID ++ +A L L KG+ S ++ I GLC++G + A
Sbjct: 315 RITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGA 374
Query: 401 LELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ +M K + + L+ S +K + T +RL+D++
Sbjct: 375 RNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKT--LRLLDEM 416
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 167/355 (47%), Gaps = 28/355 (7%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLF-------YKIP--------------KFRINRVGFAIE 155
++F LI Y ++ D++ F + +P K+ + GF E
Sbjct: 67 YVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKE 126
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
IL C G+ ++++ C++ ++ + + E+ K G +V + ++
Sbjct: 127 ILEC----GYPASLYFFNILMHRFCKEGEMRLAQSV--FDEITKWGLRPSVVSFNTLMNG 180
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
++ + + + + M GI+PD+ Y++++NG+ + A ELFDE++ GLVP+
Sbjct: 181 YIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPN 240
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+ I+G CK +++ ++ M G PD+ITYNTL+ LCK +L + ++L+
Sbjct: 241 GVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLID 300
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG+ + TY+ +IDG +GD+ A + + + + + I GLC+ G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREG 360
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF-VNTSFIRLVDQILNTPC 449
A ++L++M + P + ++ K D + + ++ + + + PC
Sbjct: 361 QSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPC 415
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 24/250 (9%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
L S +H I +P Y +I L + S+ D + + D E N P +
Sbjct: 193 LKSAMHGSGI---QPDVYTYSVLINGLCKESKMNDANELFD--EMIGNGLVPNGV---TF 244
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
T D H S++L A+E M+ GF D T + ++ +C++
Sbjct: 245 TTLIDGHCKTGSIDL--------------AMEAYKEMLRQGFSPDLITYNTLIYGLCKEG 290
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
DL + L + EM G + YT +I K+ + A +M + I+ D V
Sbjct: 291 DLKQAQDL--IDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVA 348
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT +++G+ + V AE++ E+L +GL PD TY + IN CK+ +V+ G K++ M+
Sbjct: 349 YTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQ 408
Query: 304 ELGSKPDVIT 313
G P V+T
Sbjct: 409 RDGHVPCVVT 418
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ +CM +DG D L++SS L S + F+ E+ G Y N++
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAK--NFLNEVHCYGIKVSPFVYNNLLNM 188
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
LVK+ V +A+ + + PD+ + +++ G+ + KA E F + G PD
Sbjct: 189 LVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPD 248
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEEL---GSKPDVITYNTLLQALCKVRELNRLRE 332
+ +YN ING C+ N + G ++ E++ G PDVITY +++ CK+ ++ E
Sbjct: 249 IVSYNTLINGFCRVNEISKGHDLLK--EDMLIKGVSPDVITYTSIISGYCKLGDMKAASE 306
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM GI N T++++IDG G++ A + E+ L G F I G C
Sbjct: 307 LFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYC 366
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V + L+L ++M +++SP + L+
Sbjct: 367 REGEVNQGLKLWEEMKVRNLSPNVYTYAVLI 397
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 146/282 (51%), Gaps = 7/282 (2%)
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVF 223
F D + ++++ +C ++ D+ F Q M G CF +V Y +I + ++
Sbjct: 210 FVPDVYSFNILIRGLCRIGEI--DKAFEFFQNMGNFG-CFPDIVSYNTLINGFCRVNEIS 266
Query: 224 DALGILNQ-MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+L + M G+ PD++ YT +++G D A ELFDE++ G+ P+ +T+NV
Sbjct: 267 KGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVL 326
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+G K N+ + + M M LG PDV+T+ +L+ C+ E+N+ +L +EMK + +
Sbjct: 327 IDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNL 386
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
N+ TY+++I+ L + I EA L + + + +++ I G C+ G V +A
Sbjct: 387 SPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANF 446
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSKLDFVN--TSFIRLVD 442
++ +M +K P + L++ + K V ++F ++++
Sbjct: 447 IVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE 488
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 21/238 (8%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ S + K+ A LN++ GIK Y +LN ++ Q +A LF E L
Sbjct: 150 LVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPY 209
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
VPDVY++N+ I GLC+ ++ + M G PD+++YNTL+ C+V E+++
Sbjct: 210 FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH 269
Query: 332 ELVKE-MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+KE M KG+ ++ TY+ +I G GD+ A L +E ++ G+ F+ I G
Sbjct: 270 DLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329
Query: 391 LCQRGLVRKALELLKQM--------------------ADKDVSPGARVWEALLLSSVS 428
+ G +R A+ + ++M + +V+ G ++WE + + ++S
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLS 387
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 127/269 (47%), Gaps = 1/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI + A E M N G D + + +++ C ++S L ++M G
Sbjct: 226 RIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDL-LKEDMLIKGVSPD 284
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT++I K + A + ++M S GIKP+ + ++++G + A +++
Sbjct: 285 VITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYE 344
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++L+LG +PDV T+ I+G C++ V G+K+ M+ P+V TY L+ ALCK
Sbjct: 345 KMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKEN 404
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ R ++ +K +V Y+ +IDG G + EA ++ E K F
Sbjct: 405 RIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFT 464
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I G C +G + +A+ +M + + P
Sbjct: 465 ILIIGNCMKGRMVEAISTFYKMIEINCVP 493
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M+ G D T + I+S C+ D+ ++ EL EM G + +I K
Sbjct: 276 MLIKGVSPDVITYTSIISGYCKLGDMKAASELF---DEMVSSGIKPNDFTFNVLIDGFGK 332
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ A+ + +M G PD+V +T +++G + + + +L++E+ V L P+VYT
Sbjct: 333 VGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y V IN LCK+N + + ++ P YN ++ CK +++ +V EM+
Sbjct: 393 YAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
K + T++I+I G KG ++EA + + + I L + G+
Sbjct: 453 EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPN 512
Query: 399 KALELLKQMADKDVSPG 415
+A + +KQ A + ++ G
Sbjct: 513 EASQ-IKQAALQKLNLG 528
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 132/264 (50%), Gaps = 6/264 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF +IL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 122 GFYEDILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 175
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 176 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 235
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 296 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 355
Query: 391 LCQRGLVRKALELLKQMADKDVSP 414
LCQ G A ++L++M + P
Sbjct: 356 LCQEGRSVDAEKMLREMLSVGLKP 379
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 92/164 (56%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ +FD + GL P V +YN +NG + +++ G ++ + M G +PDV TY+ L+
Sbjct: 155 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 214
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK +++ EL EM KG+V N T++ +IDG G + A + ++ L++ L
Sbjct: 215 GLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GLC++G +++A +L+ +M+ K + P + L+
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 318
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPN 240
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLID 300
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 301 EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 360
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ ++ TY+++I+ KGD+ + LL+E G
Sbjct: 361 RSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 411
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 176/394 (44%), Gaps = 55/394 (13%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
+Y+ +I SQ +VL + K +E L+ Y + R D+V L +
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 175
Query: 142 IPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + F N+ A+ +++ M+ G D T +++ +C++ D
Sbjct: 176 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD 235
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI--- 241
+ D L +++M+K +V Y +I L K + + DA + N+M++ GI+PD+
Sbjct: 236 I--DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293
Query: 242 --------------------------------VCYTMVLNGVIVQEDYVKAEELFDELLV 269
V ++ +++ + + V+AE+L+DE++
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD++TY+ ING C + ++ M M P+V+TYNTL++ CK + +
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL +EM +G+V N TY+ +I GL GD A + ++ ++ G+ + +
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G + KAL + + + + P + ++
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 163/350 (46%), Gaps = 23/350 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C+P Y V+ L + S+L +EK + E I+ +I D
Sbjct: 215 GCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHIDD 273
Query: 135 SVNLFYKIPKFRINRVGFAI-EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+ LF K+ I F +++C+ N G D S +LS++ E R ++ +
Sbjct: 274 AFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDA---SRLLSNMIE-RKINPN----- 324
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+V ++ +I + VK+ K+ +A + ++M I PDI Y+ ++NG +
Sbjct: 325 ------------VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ +A+ +F+ ++ P+V TYN I G CK VE G+++ M + G + +T
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNTL+Q L + + + +++ K+M G+ ++ TYSI++DGL G + +A + E
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I G+C+ G V +L ++ K V P ++ ++
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 133/271 (49%), Gaps = 4/271 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ + + D ++ + M+ L + + Y +I ++ ++ AL +L +M
Sbjct: 86 LLSAIAKMKKF--DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +PDIV + +LNG + A L D+++ +G PD T+N I+GL N
Sbjct: 144 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASE 203
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ M + G +PD++TY ++ LCK +++ L+K+M+ I ++ Y+ +ID
Sbjct: 204 AVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 263
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL I +A L + KG+ ++ I LC G A LL M ++ ++P
Sbjct: 264 GLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINP 323
Query: 415 GARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ AL+ + V + V +L D+++
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAE--KLYDEMI 352
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 161/364 (44%), Gaps = 38/364 (10%)
Query: 70 SFSIYN------CEPPPEAYHFVIKTLAENSQFCDISSVLDH-IEKRENFETPEFI-FID 121
+F+++N P Y+ +I L ++ D S +L + IE++ N P + F
Sbjct: 274 AFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKIN---PNVVTFSA 330
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK----------- 170
LI + + ++ L+ ++ K I+ F + +IN GFC+ +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT---YSSLIN-GFCMHDRLDEAKHMFELM 386
Query: 171 ----------TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
T + ++ C+ + + +E + +EM + G V Y +I+ L +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRV--EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
A I +M SDG+ PDI+ Y+++L+G+ KA +F+ L + PD+YTYN
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+ I G+CK VE G + + G KP+VI Y T++ C+ L +EMK
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G + + Y+ +I GD + L++E + G +S I L L +
Sbjct: 565 GTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
Query: 401 LELL 404
LE+L
Sbjct: 625 LEML 628
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Query: 203 CF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
CF +V Y +I+ K ++V + + + +M G+ + V Y ++ G+ D A+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
++F +++ G+ PD+ TY++ ++GLCK +E + + +++ +PD+ TYN +++ +
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK ++ +L + KG+ N+ Y+ MI G KG EA L E G S
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 570
Query: 382 SMFDETICGLCQRGLVRKALELLKQM 407
++ I + G + EL+K+M
Sbjct: 571 GCYNTLIRARLRDGDKAASAELIKEM 596
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 117/240 (48%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+L D+ +G EM + +V++ ++ ++ K +K + + +M++ I D+
Sbjct: 58 NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYS 117
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y +++N + A + +++ LG PD+ T + +NG C + + ++ M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E+G KPD +T+NTL+ L + + LV +M +G +L TY +++GL +GDI
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL++ + +++ I GLC+ + A L +M K + P + +L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 194/441 (43%), Gaps = 64/441 (14%)
Query: 15 RKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIY 74
R HRK LSP K ++L+ + A+ +K S T + I
Sbjct: 83 RIHRKHVLSPVVVKVFKSLNWEVARH-IKFSTTMKKYGFSRSI----------------- 124
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKREN-------------FETPE----- 116
+A+ V+ LA ++ ++L I N E+P+
Sbjct: 125 ------DAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDAARS 178
Query: 117 -FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILN 158
+F LIK +A +++V++F + K + NR F +
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238
Query: 159 CMINDGFCVDGKTCSLILSSVCE----QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
M + G + T +++++ C+ + D+ + + ++EM++ G +V Y+ I
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIY 298
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L + V AL + + S ++ CY +++G+ + + +A ++ +E+ G+ P
Sbjct: 299 GLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISP 358
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
DVYTY++ I+G CKQ +VE G+ +I M+ +P +++Y++L LCK R + ++
Sbjct: 359 DVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIF 418
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+++ G + YSI+I G +GD+ A L+EE + L S F+ + G C+
Sbjct: 419 RDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKM 478
Query: 395 GLVRKALELLKQMADKDVSPG 415
GL ALE M + + P
Sbjct: 479 GLWVNALEFFNMMLEGGILPS 499
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 129/262 (49%), Gaps = 2/262 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E N M+ G TC++I+ + C R+ +E L + EM+ G + Y V
Sbjct: 484 ALEFFNMMLEGGILPSIATCNVIIDAHC--REGRVEEALNLMNEMQTQGIFPNLFTYNAV 541
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K+ K AL + M + P +V Y+ +++G Q + KA L+ +L +G+
Sbjct: 542 INRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGV 601
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ Y + IN LC ++ + + M E G PD I+Y +++ C++ ++ +
Sbjct: 602 TPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWA 661
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM +G + + TY+ ++DG I A L++E KG+ ++ I
Sbjct: 662 LFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHR 721
Query: 393 QRGLVRKALELLKQMADKDVSP 414
+RG + KALE+L +M + V P
Sbjct: 722 RRGNLDKALEMLNEMKENGVLP 743
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 143/320 (44%), Gaps = 35/320 (10%)
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL----- 191
+LF+ + K R++ + +++I + G+ D S+++ C Q DL S L
Sbjct: 400 SLFHGLCKKRLSDI--SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMV 457
Query: 192 ------------GFVQEMKKLGFCFGMVDYTN----------------VIRSLVKKEKVF 223
V K+G +++ N +I + ++ +V
Sbjct: 458 RNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVE 517
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+AL ++N+M++ GI P++ Y V+N + + +A ELF +L ++P V Y+ I
Sbjct: 518 EALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLI 577
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G KQ+N + + + A M ++G PD++ Y L+ LC + L K+M G+
Sbjct: 578 DGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMT 637
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ +Y+ +I G GD+ +A L E L +G + + G C+ + A L
Sbjct: 638 PDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADML 697
Query: 404 LKQMADKDVSPGARVWEALL 423
+ +M K ++P + L+
Sbjct: 698 IDEMKRKGITPDVVTYNVLI 717
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 90/167 (53%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+S + L M K+G MV YT +I L + ++ +A + +M +G+ PD + YT
Sbjct: 585 NSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYT 644
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
V+ G D KA LF+E+L G +P V TY ++G CK N ++ +I M+
Sbjct: 645 SVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRK 704
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
G PDV+TYN L+ A + L++ E++ EMK G++ + TY ++
Sbjct: 705 GITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++L M + G D T S+++ C+Q D+ ++ L ++EMK +V Y+++
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQGDV--EKGLYLIEEMKYSNMEPSLVSYSSL 401
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
L KK +L I + + G K D Y++++ G +Q D A +L +E++ L
Sbjct: 402 FHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNL 461
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD + ++G CK ++ M E G P + T N ++ A C+ +
Sbjct: 462 APDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALN 521
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ EM+ +GI NL TY+ +I+ L + A L L + + ++ I G
Sbjct: 522 LMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFA 581
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ +KAL L +M V+P + L+
Sbjct: 582 KQSNSQKALMLYARMLKIGVTPDMVAYTILI 612
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EIL M +G T S + +C + S L FV+ + + Y +
Sbjct: 274 ATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESA--LDFVRSLISANGLVNVYCYNAI 331
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK ++ +AL +L +MKS GI PD+ Y+++++G Q D K L +E+ +
Sbjct: 332 IHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNM 391
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P + +Y+ +GLCK+ + + + + G K D Y+ L++ C +L+ +
Sbjct: 392 EPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHK 451
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L++EM + + + ++ G G + A L G+ + + I C
Sbjct: 452 LMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHC 511
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V +AL L+ +M + + P + A++
Sbjct: 512 REGRVEEALNLMNEMQTQGIFPNLFTYNAVI 542
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 159/318 (50%), Gaps = 23/318 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L + Y EP +Y+ V+K L ++ D +++ + + P + +++ ++
Sbjct: 38 FLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGC--PPNVVTFNMLISF 95
Query: 127 -ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ ++ + +IPK+ G + + + +L + C+Q+ +
Sbjct: 96 LCRRGLVEPAMEVLEQIPKY------------------GCTPNSLSYNPLLHAFCKQKKM 137
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D+ + FV+ M G +V Y ++ +L + +V A+ +L+Q+K G P ++ Y
Sbjct: 138 --DKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYN 195
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
V++G+ +A EL DE++ GL PD+ TY +GLC+++ +E I+ ++++
Sbjct: 196 TVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDM 255
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G +P V+ YN +L LCK RE + +L M G + N TY+I+++GLA +G + EA
Sbjct: 256 GIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEA 315
Query: 366 CGLLEEALNKGLCTQSSM 383
LL + ++G+ + M
Sbjct: 316 RDLLGQLCSRGVVNKKFM 333
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 143/272 (52%), Gaps = 2/272 (0%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
+++L+ M + G D T +++L+ +C++ + D+ + F++ + G V Y V+
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRV--DDAMEFLENLPSYGGEPNTVSYNIVL 58
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
+ L E+ DA ++ +M G P++V + M+++ + + A E+ +++ G
Sbjct: 59 KGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCT 118
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P+ +YN ++ CKQ ++ + + M G PD+++YNTLL ALC+ E++ +L
Sbjct: 119 PNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDL 178
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ ++K KG L +Y+ +IDGL G EA LL+E ++KGL + GLC+
Sbjct: 179 LHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCR 238
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ +A+ ++ D + P ++ A+LL
Sbjct: 239 EDKIEEAIRTFCKVQDMGIRPTVVLYNAILLG 270
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
++EM G +V + +I L ++ V A+ +L Q+ G P+ + Y +L+
Sbjct: 73 LMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFC 132
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
Q+ KA + ++ G PD+ +YN + LC+ V+ I ++ ++ G P +I
Sbjct: 133 KQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLI 192
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
+YNT++ L K + EL+ EM KG+ ++ TY+ + GL + I EA +
Sbjct: 193 SYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKV 252
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+ +++ + GLC+R A++L M P + L+
Sbjct: 253 QDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILV 303
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 192/434 (44%), Gaps = 33/434 (7%)
Query: 15 RKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIY 74
+++R P + KAK +++ + ++ P + + P +L H +
Sbjct: 1 QQYRTLPFNKPKAKPRH---RRKGHKTSSRNRNDAPFVNHVKEARDPVEALTLFHEYLQR 57
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
+P +Y ++ LA F + VL ++E + N E IFI L + Y A
Sbjct: 58 GFKPDYPSYAALLYKLARCQDFGAVEEVLRYVEDK-NVHCQETIFIALFQHYGKAQLVHK 116
Query: 135 SVNLFYKIPKFRINRVGFAI-EILNCMINDGFCVD-------GKTCSLILSSVC------ 180
+V LF ++ +F R ++ +LN ++++G+ ++ G L+SV
Sbjct: 117 AVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIK 176
Query: 181 --------EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
EQ DE+L E +V Y ++I L + ++ A G+L M
Sbjct: 177 GWLEKGEWEQASKVFDEMLERKVEPS-------VVTYNSLIGYLCRNGELDKAKGLLEDM 229
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G +P+ + + +++ G + ++ +A+++ ++ G P V + V ++ L K+ +
Sbjct: 230 IKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKI 289
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M++ KPDV+TYN L+ LCK E++ EM+ G N TY ++
Sbjct: 290 DEAKSVLHEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRML 349
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+DG GD +L L G + F + GL + G + A +L++M + +
Sbjct: 350 VDGFCRVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGACFVLEEMEKRQM 409
Query: 413 SPGARVWEALLLSS 426
A WEAL++ S
Sbjct: 410 MFCADDWEALVMES 423
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 144/276 (52%), Gaps = 2/276 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
VG A+++L+ M + G D T +++++ +C++ L DE + F+ M G ++ +
Sbjct: 32 VGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRL--DEAIKFLNSMPSYGSQPNVITH 89
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++RS+ + DA +L +M G P +V + +++N + + +A ++ +++
Sbjct: 90 NIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPT 149
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G P+ +YN ++G CK+ ++ I+ + M G PD++TYNT+L ALCK +++
Sbjct: 150 HGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDA 209
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL+ ++ KG L TY+ +IDGL+ G +A LL E KGL + I
Sbjct: 210 AVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIA 269
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GL + G V +A++ + V P A + +++
Sbjct: 270 GLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 156/316 (49%), Gaps = 21/316 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+S Y +P ++ +++++ ++ D +L + ++ +P + +++
Sbjct: 73 FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGC--SPSVVTFNIL--- 127
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+N R +G AI+IL M G + + + +L C+++ +
Sbjct: 128 ---------INFL-----CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKM- 172
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + +++ M G +V Y ++ +L K KV A+ +LNQ+ S G P ++ Y
Sbjct: 173 -DRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 231
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ +A EL E+ GL PDV TY+ I GL ++ VE IK +E G
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG 291
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KP+ TYN+++ LCK ++ +R + + M KG +Y+I+I+G+A++G EA
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEAL 351
Query: 367 GLLEEALNKGLCTQSS 382
LL E ++G+ +SS
Sbjct: 352 ELLNELCSRGVVKKSS 367
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 154/303 (50%), Gaps = 10/303 (3%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGM 206
R+ AI+ LN M + G + T ++IL S+C R + +++LL EM + G +
Sbjct: 65 GRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLL---TEMVRKGCSPSV 121
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V + +I L +K + A+ IL +M + G P+ + Y +L+G ++ +A + +
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G PD+ TYN + LCK V+A ++++ + G P +ITYNT++ L KV +
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ EL+ EM+ KG+ ++ TYS +I GL+ +G + EA + G+ + ++
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ GLC+ +A++ L M K P V +L+ ++ N + ++LN
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKGCKP-TEVSYTILIEGIA-----NEGLAKEALELLN 355
Query: 447 TPC 449
C
Sbjct: 356 ELC 358
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 113/213 (53%), Gaps = 6/213 (2%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD++ YT+++ + +A +L DE+ G PDV TYNV +NG+CK+ ++ IK
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M GS+P+VIT+N +L+++C +L+ EM KG ++ T++I+I+ L
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
KG + A +LE+ G S ++ + G C+ + +A++ L+ M + P
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Query: 419 WEALL--LSSVSKLDFVNTSFIRLVDQILNTPC 449
+ +L L K+D + + L++Q+ + C
Sbjct: 194 YNTMLTALCKDGKVD----AAVELLNQLSSKGC 222
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%)
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
E+ D L PDV TY + I C ++ V +K++ M G KPDV+TYN L+ +
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK L+ + + M G N+ T++I++ + S G ++A LL E + KG
Sbjct: 62 CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F+ I LC++GL+ +A+++L++M +P + + LL
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLL 163
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 152/356 (42%), Gaps = 24/356 (6%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQD 134
C P Y +I+ S +LD + R P+ + + L+ R +
Sbjct: 12 CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGC--KPDVVTYNVLVNGMCKEGRLDE 69
Query: 135 SVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDG---------KTCS-------LIL 176
++ +P + + N + I IL M + G +D K CS +++
Sbjct: 70 AIKFLNSMPSYGSQPNVITHNI-ILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILI 128
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C + L + +++M G + Y ++ K++K+ A+ L M S G
Sbjct: 129 NFLCRKGLLG--RAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
PDIV Y +L + A EL ++L G P + TYN I+GL K + +
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G KPDVITY++L+ L + ++ + +++ G+ N TY+ ++ GL
Sbjct: 247 ELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGL 306
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
A L ++KG + I G+ GL ++ALELL ++ + V
Sbjct: 307 CKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 181/399 (45%), Gaps = 24/399 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIK 124
++ Y+CEP +Y+ ++ L ++ F V ++ R+ TP+ + F +K
Sbjct: 97 NVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKV--YMRMRDRGITPDVYSFTIRMK 154
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCV 167
++ R ++ L + +N V + E+ M+ G +
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
T + +L +C++ D+ E L + ++ K G + Y I+ L ++ ++ A+
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKL--LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++ + G KPD++ Y ++ G+ + +AE +++ GL PD YTYN I G C
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K V+ +++ G PD TY +L+ LC E NR L E KGI N+
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y+ +I GL+++G I+EA L E KGL + F+ + GLC+ G V A L+K M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
K P + L+ ++L N + ++D +L+
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENA--LEILDVMLD 489
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 167/374 (44%), Gaps = 26/374 (6%)
Query: 78 PPPE--AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P+ Y+ +I L +NS+F + L + E E + + LI Y Q
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKM-VNEGLEPDSYTYNTLIAGYCKGGMVQ-- 338
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
A I+ + +GF D T ++ +C + + ++ L
Sbjct: 339 ----------------LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE--TNRALALFN 380
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
E G ++ Y +I+ L + + +A + N+M G+ P++ + +++NG+
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A+ L ++ G PD++T+N+ I+G Q +E ++++ M + G PDV TYN
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+LL LCK + + E K M KG NL T++I+++ L + EA GLLEE NK
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADK-DVSPGARVWEALLLSSVSKLDFVN 434
+ + F I G C+ G + A L ++M + VS + ++ + KL+
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620
Query: 435 TS--FIRLVDQILN 446
F +VD+ L
Sbjct: 621 AEKLFQEMVDRCLG 634
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 174/415 (41%), Gaps = 96/415 (23%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETP--EFIFIDLIKTYADAHRFQDSVNLF 139
Y VI+ L +F + VL ++ REN E +++ +K Y + Q++VN+F
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVL--VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 99
Query: 140 YKIPKFRINRVGFAIE-ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
++ + F+ I++ +++ G+ D+ M+
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLVDSGY---------------------FDQAHKVYMRMR 138
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE--- 255
G + +T ++S K + AL +LN M S G + ++V Y V+ G +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 256 --------------------------------DYVKAEELFDELLVLGLVPDVYTYNVYI 283
D + E+L D+++ G++P+++TYN++I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR-------------- 329
GLC++ ++ ++M+ C+ E G KPDVITYN L+ LCK +
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 330 ---------------------LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
+V + + G V + TY +IDGL +G+ A L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EAL KG+ +++ I GL +G++ +A +L +M++K + P + + L+
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 130/300 (43%), Gaps = 38/300 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ N M G + +T +++++ +C+ +S + G V+ M G+ + + +
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD--GLVKVMISKGYFPDIFTFNIL 467
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K+ +AL IL+ M +G+ PD+ Y +LNG+ + E + ++ G
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+++T+N+ + LC+ ++ + ++ M+ PD +T+ TL+ CK +L+
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 333 LVKEMK-----------WKGIV------LNLQ-------------------TYSIMIDGL 356
L ++M+ + I+ LN+ TY +M+DG
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G++ L E + G + I LC V +A ++ +M K + P A
Sbjct: 648 CKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+EIL+ M+++G D T + +L+ +C+ ++++ + M + G + + +
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF--EDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLG 271
+ SL + K+ +ALG+L +MK+ + PD V + +++G D A LF ++
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ TYN+ I+ ++ NV K+ M + PD TY ++ CK +N
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ + EM G + +L T +I+ L + + EA G++ + KGL ++ TIC
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV---NTIC 712
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 141/277 (50%), Gaps = 2/277 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++LN M DG D T + ++S +C D+ V M K + + +
Sbjct: 205 ALDLLNRMEVDGIRPDAVTYNSLISGLCNSG--RWDDATRMVSCMTKREIYPDVFTFNAL 262
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + VK+ ++ +A + +M + PDIV Y++++ G+ + +AE++F ++ G
Sbjct: 263 IDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGC 322
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY++ ING CK VE G+K+ M + G + +TY L+Q C+ +LN E
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEE 382
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ K M + G+ N+ TY++++ GL G I +A +L + G+ ++ I G+C
Sbjct: 383 IFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMC 442
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ G V A +L + K ++P + A++L K
Sbjct: 443 KAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKK 479
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
TC+++L+ C LS L F+ +M KLG +V + +++ + ++++DAL + +
Sbjct: 118 TCNILLNCFCRCSQLSL--ALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFD 175
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M G +P++V Y +++G+ + A +L + + V G+ PD TYN I+GLC
Sbjct: 176 RMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSG 235
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ +M++CM + PDV T+N L+ A K ++ EL +EM + + ++ TYS
Sbjct: 236 RWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYS 295
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++I GL + EA + ++KG + I G C+ V ++L +M+ +
Sbjct: 296 LLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 411 DVSPGARVWEALL 423
V + L+
Sbjct: 356 GVVRNTVTYTVLI 368
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +LS++ + + D ++ ++M+ LG + ++ + ++ AL L +M
Sbjct: 85 SRLLSAISKMK--KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G +PDIV + +LNG + A +FD ++ +G P+V YN I+GLCK V
Sbjct: 143 MKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQV 202
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + ++ ME G +PD +TYN+L+ LC + +V M + I ++ T++ +
Sbjct: 203 DNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNAL 262
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
ID +G I EA L EE + + L + I GLC + +A ++ M K
Sbjct: 263 IDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGC 322
Query: 413 SPGARVWEALL 423
P + L+
Sbjct: 323 FPDVVTYSILI 333
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 109/235 (46%), Gaps = 6/235 (2%)
Query: 201 GFCF------GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
G CF G DY ++R+ ++ K+ D+L + M P I ++ +L+ +
Sbjct: 35 GLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM 94
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ Y L++++ +LG+ ++ T N+ +N C+ + + + + M +LG +PD++T+
Sbjct: 95 KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTF 154
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+LL C+ + + M G N+ Y+ +IDGL + A LL
Sbjct: 155 GSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEV 214
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G+ + ++ I GLC G A ++ M +++ P + AL+ + V +
Sbjct: 215 DGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 129/297 (43%), Gaps = 22/297 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKT 125
LL+ + P Y+ +I L + ++ D + ++ + KRE + P+ F F LI
Sbjct: 208 LLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIY--PDVFTFNALIDA 265
Query: 126 YADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVD 168
R ++ L+ ++ + ++ R+ A ++ M++ G D
Sbjct: 266 CVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPD 325
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S++++ C+ + + + + EM + G V YT +I+ + K+ A I
Sbjct: 326 VVTYSILINGYCKSKKV--EHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEI 383
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
M G+ P+I+ Y ++L+G+ KA + ++ G+ D+ TYN+ I G+CK
Sbjct: 384 FKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCK 443
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
V + + G PD+ TY ++ L K L ++MK GI+ N
Sbjct: 444 AGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 144/313 (46%), Gaps = 33/313 (10%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS----------------- 186
+F+ GFA ++ + + G KTC+ +LSS+ + +L
Sbjct: 196 QFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPD 255
Query: 187 ----------------SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
D+ +G +M+KLG +V Y N+I L K ++ +A
Sbjct: 256 VHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKE 315
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M + + P ++ Y++ +NG+I E +A + E+ LG VP+ YN I+G CK
Sbjct: 316 KMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMG 375
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N+ +K+ M G P+ +T N+L+Q CK ++ + +++EM +G+ +N ++S
Sbjct: 376 NISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFS 435
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++I+ L K + A + E L + L + + GLC+ G +A+EL ++ K
Sbjct: 436 MVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK 495
Query: 411 DVSPGARVWEALL 423
P AL+
Sbjct: 496 GFVPNIVTSNALI 508
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 145/281 (51%), Gaps = 8/281 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ + G A+E+ ++ GF + T + ++ +C+ ++ E L +++M + G F
Sbjct: 478 KAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNM--QETLKLLRDMLERGLVFD 535
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I K+ KV + + +M GI+PDI + ++L+G+ + +A L+
Sbjct: 536 RITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWH 595
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP---DVITYNTLLQALC 322
E G VP+VYTY V I+G CK N VE G + + EL SK + + YN+L++A C
Sbjct: 596 ECKKNGYVPNVYTYGVMIDGYCKANKVEEGENL---LNELVSKKLELNSVVYNSLIRAYC 652
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+N L +MK +G++L+ TYS ++ GL + G + +A LL+E +GL
Sbjct: 653 INGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVV 712
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G + G + K +L++M+ ++ P + ++
Sbjct: 713 CYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMI 753
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 7/293 (2%)
Query: 134 DSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG 192
+SV L I F + +++G A +L MI G ++ + S++++ +C + + L
Sbjct: 395 NSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTA--LH 452
Query: 193 FVQEM--KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
F++EM + L G++ T ++ L K K +A+ + ++ G P+IV +++G
Sbjct: 453 FIREMLLRNLRPNDGLL--TTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHG 510
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + + +L ++L GLV D TYN I+G CK+ V+ G ++ M + G +PD
Sbjct: 511 LCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPD 570
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+ T+N LL LC +++ L E K G V N+ TY +MIDG + E LL
Sbjct: 571 IYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLN 630
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E ++K L S +++ I C G + A L M + V + +L+
Sbjct: 631 ELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLM 683
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 40/367 (10%)
Query: 99 ISSVLDHIEKRENFETPEFI-----------FIDLIKTYADAHRFQDSVNLFYKIPKFRI 147
+SS++ E ++++E +FI F +I + HR D++ LF K+ K
Sbjct: 228 LSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLG- 286
Query: 148 NRVGFAIEILNCMINDGFCVDGK---------------------TCSLILSSVCEQRDLS 186
V + N +I+ G C G+ T S+ ++ + + +
Sbjct: 287 --VAPNVVTYNNIIH-GLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKI- 342
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE ++EM +LGF V Y +I K + +AL I + M S GI P+ V
Sbjct: 343 -DEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNS 401
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ G + +AE + +E++ GL + ++++ IN LC + + I M
Sbjct: 402 LIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN 461
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+P+ TL+ LCK + EL + KG V N+ T + +I GL G++ E
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETL 521
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--L 424
LL + L +GL ++ I G C+ G V++ EL ++M K + P + LL L
Sbjct: 522 KLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGL 581
Query: 425 SSVSKLD 431
+ K+D
Sbjct: 582 CNADKID 588
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 121/253 (47%), Gaps = 2/253 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G D T +L+L +C + DE E KK G+ + Y +I K
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKI--DEASRLWHECKKNGYVPNVYTYGVMIDGYCKA 619
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
KV + +LN++ S ++ + V Y ++ + + A L D++ G++ TY
Sbjct: 620 NKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATY 679
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ++GLC V+ ++ M + G P+V+ Y T++ K+ ++N++ +++EM
Sbjct: 680 SSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSS 739
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
I N TY+IMIDG G EA LL E KG+ + ++ GLC+ G V +
Sbjct: 740 HNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEE 799
Query: 400 ALELLKQMADKDV 412
A ++ +M+ V
Sbjct: 800 AFKVCDEMSSGAV 812
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 129/281 (45%), Gaps = 25/281 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P ++ ++ L N+ D +S L H K+ + + + +I Y A++ ++
Sbjct: 568 QPDIYTFNLLLHGLC-NADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGE 626
Query: 137 NLFYKI--PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
NL ++ K +N V + N +I +C++G +++ RD
Sbjct: 627 NLLNELVSKKLELNSV-----VYNSLIR-AYCINGN-----MNAAFRLRD---------- 665
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+MK G Y++++ L V DA +L++M+ +G+ P++VCYT ++ G
Sbjct: 666 -DMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKL 724
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
K + E+ + P+ +TY + I+G CK + K++ M E G PD +TY
Sbjct: 725 GQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTY 784
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
N LCK ++ ++ EM + L+ TY+ +IDG
Sbjct: 785 NAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
GF +V +I L K + + L +L M G+ D + Y +++G + +
Sbjct: 496 GFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEG 555
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
EL +E++ G+ PD+YT+N+ ++GLC + ++ ++ ++ G P+V TY ++
Sbjct: 556 FELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDG 615
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
CK ++ L+ E+ K + LN Y+ +I G++ A L ++ ++G+
Sbjct: 616 YCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLS 675
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
+ + + GLC GLV A LL +M + + P + ++ SKL +N
Sbjct: 676 CATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTT-IIGGYSKLGQMN 728
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 2/231 (0%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
+G+ + T +++ C+ + E L + E+ V Y ++IR+ +
Sbjct: 600 NGYVPNVYTYGVMIDGYCKANKVEEGENL--LNELVSKKLELNSVVYNSLIRAYCINGNM 657
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
A + + MKS G+ Y+ +++G+ A+ L DE+ GL+P+V Y
Sbjct: 658 NAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTI 717
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I G K + ++ M P+ TY ++ CK+ + +L+ EM KGI
Sbjct: 718 IGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGI 777
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ + TY+ +GL +G + EA + +E + +C + I G Q
Sbjct: 778 LPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQ 828
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 137/273 (50%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G V Y
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSAVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A+ELFDE+LV
Sbjct: 182 TLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ +M KG+ + TY+ +IDG +GD+ A + + + + ++ I G
Sbjct: 302 HDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M ++P + ++
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLNPDTGTYTMII 394
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDY 209
GF ++ + M+ G D T S++++ + ++ + +DEL EM G V +
Sbjct: 196 GFRLK--SAMLASGVQPDVYTYSVLINGLSKESKMDDADELF---DEMLVKGLVPNGVTF 250
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D++
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSR 310
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
GL PD TY I+G CK+ ++++ + M + + D + Y L+ LC+
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVD 370
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ + LL+E G
Sbjct: 371 AEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 231 ADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLLPDLITYNTL 288
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A +++ M G+KPD + YT +++G + D A E ++ +
Sbjct: 289 IYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENI 348
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G PD TY ++ CK ++ + +
Sbjct: 349 RLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSK 408
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 409 LLKEMQRDGHVPSVVTYNVLMNG 431
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 186/418 (44%), Gaps = 66/418 (15%)
Query: 69 HSFSIYNCEPPPEA-------YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
H+ I+N + Y +I+ LA+ +F I VL H + + E IF++
Sbjct: 65 HALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVL-HQMTYDTCKVHEGIFLN 123
Query: 122 LIKTYADAHRFQDSVNLFYKI-------PKFRI-----------NRVGFAIEIL------ 157
L+K ++ + + +++FY I P + +RV A ++L
Sbjct: 124 LMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARSK 183
Query: 158 ------NCMIN---DGFCVDGK----------------------TCSLILSSVCEQRDLS 186
C+ N C +G T S ++ +CE L
Sbjct: 184 LNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLK 243
Query: 187 SDELLGFVQEM-KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
E + F +EM K + Y +I ++ KV A IL MKS+G P++ Y+
Sbjct: 244 --EAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYS 301
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++NG + +A+E+F+E+ LG+ PD +Y IN LC+ V+ +++ M++
Sbjct: 302 VLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDK 361
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+ D +T+N +L LC+ + ++V+++ ++G LN +Y I+++ L KG++ +A
Sbjct: 362 DCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKA 421
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL LN+G + + + LC G+V+ A+E L + + P W L+
Sbjct: 422 TELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLV 479
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 150/319 (47%), Gaps = 27/319 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV--------------GFAIE 155
++F LI Y ++ +D++ F + +P +V GF E
Sbjct: 67 YVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKE 126
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
IL C G+ ++++ C++ ++ + + K G +V + +I
Sbjct: 127 ILEC----GYPTSLYFFNILMHRFCKEGEIRLAQ--SVFDAITKCGLRPSVVSFNTLING 180
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
++ + + M + G+ PD+ T+++NG+ + +A ELF+E+L GLVP+
Sbjct: 181 YIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPN 240
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+ I+G CK V+ +++ M G PD+ITYNTL+ LC+ +L + R+L+
Sbjct: 241 GVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIV 300
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG+ + TY+ +IDG +GD+ A L + + + + + I GLCQ G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEG 360
Query: 396 LVRKALELLKQMADKDVSP 414
A ++L++M + P
Sbjct: 361 RAVDAEKMLREMLSVGLKP 379
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 2/201 (0%)
Query: 209 YTN--VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
YTN +I L K+ K+ +A + N+M G+ P+ V +T +++G A E++ +
Sbjct: 207 YTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQ 266
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L G PD+ TYN I GLC++ +++ +I M G KPD ITY TL+ CK +
Sbjct: 267 MLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGD 326
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L EL K M + I L+ Y+ +I GL +G ++A +L E L+ GL ++ +
Sbjct: 327 LETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTM 386
Query: 387 TICGLCQRGLVRKALELLKQM 407
I G C++G V+ A +LLK+M
Sbjct: 387 IINGFCKQGDVKTASKLLKEM 407
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 163/347 (46%), Gaps = 11/347 (3%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT----YADAHRFQDSV 136
+Y +I L+ + + + S++ + R+ ++ +F +++T +D + F +
Sbjct: 14 HSYCTMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFAAILETKGAQRSDIYVFSGLI 73
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+ + R AIE F V TC +L + + + + GF +E
Sbjct: 74 TAYLESGFLRD-----AIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKL--VWGFYKE 126
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ + G+ + + ++ K+ ++ A + + + G++P +V + ++NG I D
Sbjct: 127 ILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGD 186
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
K L + G+ PDVYT V INGLCK++ ++ ++ M + G P+ +T+ T
Sbjct: 187 LDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTT 246
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ CK ++ E+ K+M +G +L TY+ +I GL KGD+ +A L+ E KG
Sbjct: 247 LIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKG 306
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + I G C+ G + A EL K+M ++ + + AL+
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALI 353
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ +FD + GL P V ++N ING + +++ G ++ M G PDV T L+
Sbjct: 155 AQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLIN 214
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK +++ EL EM KG+V N T++ +IDG G + A + ++ L +G
Sbjct: 215 GLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSP 274
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I GLC++G +++A +L+ +M+ K + P + L+ S + D + T+F
Sbjct: 275 DLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGD-LETAF 331
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + M G D T +++++ +C++ + DE EM G
Sbjct: 183 RLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKM--DEANELFNEMLDKGLVPN 240
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V AL I QM G PD++ Y ++ G+ + D +A +L
Sbjct: 241 GVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIV 300
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ ++E ++ M E + D + Y L+ LC+
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEG 360
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ TY+++I+G +GD+ A LL+E G
Sbjct: 361 RAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDG 411
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M+ G+ D T + ++ +C + DL L + EM G +
Sbjct: 255 GRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDL--IVEMSMKGLKPDKI 312
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A + +M + I+ D V YT +++G+ + V AE++ E+
Sbjct: 313 TYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREM 372
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L +GL P+ TY + ING CKQ +V+ K++ M+ G P V+T
Sbjct: 373 LSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ N M++ G +G T + ++ C+ + D L ++M + G+ ++ Y +
Sbjct: 225 ANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRV--DLALEIYKQMLRQGYSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L +K + A ++ +M G+KPD + YT +++G + D A EL ++ +
Sbjct: 283 IYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP+ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASK 402
Query: 333 LVKEMKWKGIV 343
L+KEM+ G V
Sbjct: 403 LLKEMQRDGHV 413
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 135/268 (50%), Gaps = 4/268 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTN 211
A + N M+ G + T ++ +C+ +L +++ELL EM+K G + Y +
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL---DEMRKKGLQLNVCIYNS 508
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ + K + A+ ++ +M+ GI PD + YT V++ D KA +L E+L G
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V T+NV +NG C +E G +++ M E G PD ITYNTL++ C +N
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
++ K M+ +G+ + TY+I+I G ++ EA L +E + KG + ++ I
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVW 419
++ +A EL ++M + ++
Sbjct: 689 YKKRKFXEARELFEEMRGHGLVADGEIY 716
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 118/217 (54%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ YT +I+ + KV + + ++M S G+KPD V YT +++ + V A L +E
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ +G+ P++ TY I+GLCK ++ +++ M + G + +V YN+++ +CK
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + +L+KEM+ GI + TY+ +ID GDI +A LL+E L++GL F+
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C G++ LL M +K + P A + L+
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ +V A +L M D + S ++ C +L + L + +M+ G
Sbjct: 270 RLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK--KALKLMDDMQIKGLKPN 327
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y ++I L K K F+A +L +M S I PD V YT +++G A + FD
Sbjct: 328 RYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFD 387
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L + PD TY I G + V + M G KPD +TY TL+ CK
Sbjct: 388 EMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG 447
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+ L EM G+ N+ TY +IDGL G++ A LL+E KGL +++
Sbjct: 448 EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYN 507
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+C+ G + +A++L+K+M + P A + ++
Sbjct: 508 SMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 122/229 (53%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM G V YT +I K ++ +A + N+M G+ P+IV Y +++G+
Sbjct: 422 HEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH 481
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ A EL DE+ GL +V YN +NG+CK N+E IK++ ME G PD ITY
Sbjct: 482 GELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITY 541
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
T++ A C++ ++++ +L++EM +G+ + T++++++G G + + LL L
Sbjct: 542 TTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE 601
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KG+ + ++ + C R + ++ K+M ++ V+P + + L+
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 111/217 (51%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I K V A ++M S I PD + YT ++ G ++ + LF E
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHE 423
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ GL PD TY I+ CK + + M ++G P+++TY L+ LCK E
Sbjct: 424 MISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGE 483
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L+ EL+ EM+ KG+ LN+ Y+ M++G+ G+I +A L++E G+ + +
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTT 543
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I C+ G + KA +LL++M D+ + P + L+
Sbjct: 544 VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 7/315 (2%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
LI TY + ++F+++ I + A ++L+ +++ G V +C+ LS +
Sbjct: 179 LIYTYKYWGPNPIAFDIFFQVL-VEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIAN 237
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+S+ + ++ + G + Y +I SL + KV +A +L QM PD+
Sbjct: 238 ----NSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDV 293
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V Y+ V++G + KA +L D++ + GL P+ YTYN I LCK K++
Sbjct: 294 VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLRE 353
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M PD + Y TL+ K+ + + EM K I + TY+ +I G G
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK 413
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+IE L E +++GL + I C+ G + A L +M ++P + A
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGA 473
Query: 422 LL--LSSVSKLDFVN 434
L+ L +LD N
Sbjct: 474 LIDGLCKHGELDTAN 488
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 148/320 (46%), Gaps = 21/320 (6%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
+P++I + LI+ + + + NLF++ MI+ G D T
Sbjct: 395 SPDYITYTTLIQGFGQGGKVIEPQNLFHE------------------MISRGLKPDEVTY 436
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ ++ C+ ++ + EM ++G +V Y +I L K ++ A +L++M
Sbjct: 437 TTLIDVYCKAGEMVN--AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEM 494
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ G++ ++ Y ++NG+ + +A +L E+ V G+ PD TY I+ C+ ++
Sbjct: 495 RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI 554
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ K++ M + G +P V+T+N L+ C + L L+ M KGIV + TY+ +
Sbjct: 555 DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ + + + + N+G+ S+ ++ I G C+ +++A L K+M +K
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGY 674
Query: 413 SPGARVWEALLLSSVSKLDF 432
P + AL+ K F
Sbjct: 675 VPTVTSYNALIKRFYKKRKF 694
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 2/258 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L+ M G ++ + +++ +C+ ++ ++ + ++EM+ G + YT V
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNI--EQAIKLMKEMEVAGIDPDAITYTTV 544
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + + A +L +M G++P +V + +++NG + + L +L G+
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPD TYN + C +N++ K+ M G PD TYN L++ CK R L
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L KEM KG V + +Y+ +I K EA L EE GL +++ +
Sbjct: 665 LYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCY 724
Query: 393 QRGLVRKALELLKQMADK 410
+ G V L L + +K
Sbjct: 725 EEGDVEITLNLCDEAIEK 742
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 2/228 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI+++ M G D T + ++ + C D+ D+ +QEM G +V + +
Sbjct: 522 AIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI--DKAHKLLQEMLDRGLQPTVVTFNVL 579
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + D +L M GI PD + Y ++ ++ +++ + G+
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TYN+ I G CK N++ + M E G P V +YN L++ K R+ RE
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARE 699
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L +EM+ G+V + + Y+ +D +GD+ L +EA+ K L +
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLLNE 747
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 149/296 (50%), Gaps = 9/296 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AIE+ N M N G D T ++++ S+C + L E LG ++EM+ G ++ Y +
Sbjct: 298 AIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQ--EALGLLREMEISGCARNVITYNTL 355
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K +K+ +A I +QM+ G+ + V Y +++G+ +A +L D++++ GL
Sbjct: 356 IDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGL 415
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD +TYN + C++ +++ ++ M G +PD++TY TL+ LCK +
Sbjct: 416 KPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASR 475
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L++ ++ KG+VL Y+ +I L + EA L E KG + + GL
Sbjct: 476 LLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLS 535
Query: 393 QR-GLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
G + +A++ + +M +K P + L L S+S D + I+LVD ++
Sbjct: 536 NSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMED----TLIKLVDLVM 587
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 6/260 (2%)
Query: 164 GFCVDGK---TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
GFC +G+ S I E + + EL EMK G Y +I SL +
Sbjct: 272 GFCKEGRIEEALSFIDEMSNEGKHTMAIEL---YNEMKNKGCQPDEFTYNMLIDSLCYRG 328
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
K+ +ALG+L +M+ G +++ Y +++G + +AEE+FD++ + GL + TYN
Sbjct: 329 KLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYN 388
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
I+GLCK V+ +++ M G KPD TYN++L C+ ++ + ++V+ M
Sbjct: 389 TLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSN 448
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G ++ TY +I GL G + A LL KG+ ++ I L +R ++A
Sbjct: 449 GCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEA 508
Query: 401 LELLKQMADKDVSPGARVWE 420
+ L ++M +K +P A ++
Sbjct: 509 MRLFREMEEKGNTPDAFTYK 528
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI ++ M + G D KT + ++ E+ ++ D ++M G V +
Sbjct: 212 AILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNM--DGAFRVKEQMLDAGCPVTNVTVNVL 269
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K+ ++ +AL +++M ++G + A EL++E+ G
Sbjct: 270 VHGFCKEGRIEEALSFIDEMSNEG-------------------KHTMAIELYNEMKNKGC 310
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD +TYN+ I+ LC + ++ + ++ ME G +VITYNTL+ CK +++ E
Sbjct: 311 QPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEE 370
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M+ +G+ N TY+ +IDGL + EA L+++ + +GL ++ + C
Sbjct: 371 IFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFC 430
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++KA ++++ M P + L+
Sbjct: 431 REGDIQKAADIVQTMTSNGCEPDIVTYGTLI 461
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 19/212 (8%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV--IVQEDYVKAEELFDE 266
Y ++R L K IL +MK + D GV I + Y K E L++E
Sbjct: 90 YEEILRKLGKVGSFNSMKDILQEMKGLDCQID--------RGVLLIFIDSYAKFE-LYEE 140
Query: 267 LLVL--------GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+L + GL D YN +N L N ++ + + M G KPDV T+N L+
Sbjct: 141 ILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILI 200
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
+ALCK ++ +++EM G+V + +T++ ++ G +G++ A + E+ L+ G
Sbjct: 201 KALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCP 260
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+ + + G C+ G + +AL + +M+++
Sbjct: 261 VTNVTVNVLVHGFCKEGRIEEALSFIDEMSNE 292
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 109/264 (41%), Gaps = 54/264 (20%)
Query: 213 IRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVL 270
I S K E + L I+ M+ + G+ D + Y +LN V+V + +K E + ++
Sbjct: 129 IDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLN-VLVDGNKLKLVENVHSTMVSK 187
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN-- 328
G+ PDV T+N+ I LCK + + I ++ M G PD T+ TL+Q + ++
Sbjct: 188 GIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGA 247
Query: 329 -RLRE------------------------------------------------LVKEMKW 339
R++E L EMK
Sbjct: 248 FRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKN 307
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG + TY+++ID L +G + EA GLL E G ++ I G C+ + +
Sbjct: 308 KGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEE 367
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A E+ QM + +S + + L+
Sbjct: 368 AEEIFDQMEIQGLSRNSVTYNTLI 391
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 110/212 (51%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM G ++ Y+ +I S + + DA +L M I PD+V ++ ++N ++ +
Sbjct: 101 EMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEG 160
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+AEE++ ++L G+ P TYN I+G CKQ+ + +M+ M PDV+T++
Sbjct: 161 KVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFS 220
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ CK + ++ E+ EM +GIV N TY+ +I G GD+ A LL ++
Sbjct: 221 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISS 280
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G+ F + LC + +RKA +L+ +
Sbjct: 281 GVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 6/282 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+ +++ M+ +G G I++ +C+ D S L + +M++ +V
Sbjct: 24 GRVLQALALVDRMVEEGHQPYGT----IINGLCKMGDTES--ALNLLSKMEETHIKAHVV 77
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L K A + +M GI PD++ Y+ +++ + AE+L ++
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + PDV T++ IN L K+ V ++ M G P ITYN+++ CK L
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
N + ++ M K ++ T+S +I+G + + E +G+ + +
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
I G CQ G + A +LL M V+P ++++L S SK
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK 299
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M G +PD+V +T ++NG+ + ++A L D ++ G P Y INGLCK +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
E+ + +++ MEE K V+ YN ++ LCK + L EM KGI ++ TYS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
MID G +A LL + + + + F I L + G V +A E+ M +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 412 VSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+ P + + ++ K D +N + R++D + + C
Sbjct: 177 IFPTTITYNS-MIDGFCKQDRLNDA-KRMLDSMASKSC 212
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 110/220 (50%), Gaps = 5/220 (2%)
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
+L D F D + I F R R A ++L MI D T S +++++
Sbjct: 97 NLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
Query: 180 CEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
++ +S ++E+ G +M + G + Y ++I K++++ DA +L+ M S
Sbjct: 157 VKEGKVSEAEEIYG---DMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCS 213
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD+V ++ ++NG + E+F E+ G+V + TY I+G C+ +++A +
Sbjct: 214 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 273
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+ M G P+ IT+ ++L +LC +EL + ++++++
Sbjct: 274 LNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 133/264 (50%), Gaps = 6/264 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 110 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 163
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M ++G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 164 TLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 223
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL+P+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 224 GLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQA 283
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 284 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISG 343
Query: 391 LCQRGLVRKALELLKQMADKDVSP 414
LCQ G A ++L++M + P
Sbjct: 344 LCQEGQSVDAEKMLREMLSVGLKP 367
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 115/231 (49%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ +G D T S++++ +C++ + D+ EM G
Sbjct: 171 RLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLIPN 228
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I +M S + PD++ Y ++ G+ D +A +L D
Sbjct: 229 GVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLID 288
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +TY I+G CK+ +++ K M + + D + Y L+ LC+
Sbjct: 289 EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEG 348
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+ ++++EM G+ ++ TY+++I+ KGD+ + LL+E G
Sbjct: 349 QSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 399
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M++ D T + ++ +C+ DL L + EM G
Sbjct: 243 GRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDL--IDEMSMKGLKPDKF 300
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + I+ D V YT +++G+ + V AE++ E+
Sbjct: 301 TYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREM 360
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L +GL PD+ TY + IN CK+ +V G K++ M+ G P V+TYN L+
Sbjct: 361 LSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 177/373 (47%), Gaps = 40/373 (10%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSV---LDHIEKRENFETPEFIFIDL 122
SL HS +N P +F++ LA + + SV + H++ +F + L
Sbjct: 60 SLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGS----LSAL 115
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE--ILNCMINDGFCVDGK---------- 170
I+ +ADA + Q L + + + R GF + I+N ++ G C +G
Sbjct: 116 IECFADAQKPQ----LGFGVVGLVLKR-GFTVNVFIMNIVLK-GLCRNGGVFEAMGLIRE 169
Query: 171 -----------TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVK 218
+ + +++ +C+ + L E +G + EM+ G CF V T ++ L K
Sbjct: 170 MGRKSVSPDIVSYNTLINGLCKAKKLK--EAVGLLLEMEAAG-CFPNSVTCTTLMDGLCK 226
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
++ +A+ +L MK G D+V Y +++G + + +ELFDE+L G+ +V T
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 286
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y+ ++GLC+ + ++ M E G PDV+TY L+ LCK +L+ M
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 346
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KG + TY++++ GL +G +I+A +L + KG ++ + GLC +G V
Sbjct: 347 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 406
Query: 399 KALELLKQMADKD 411
+AL+L M D +
Sbjct: 407 EALKLFNSMFDNE 419
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 121/247 (48%), Gaps = 1/247 (0%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
G V + K GF + V++ L + VF+A+G++ +M + PDIV Y ++NG
Sbjct: 129 FGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLING 188
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + +A L E+ G P+ T ++GLCK ++ ++++ M++ G D
Sbjct: 189 LCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDAD 248
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V+ Y TL+ C L+R +EL EM KGI N+ TYS ++ GL G EA +L
Sbjct: 249 VVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLN 308
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
G+ + I GLC+ G A++LL M +K P + V +LLS + K
Sbjct: 309 AMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP-SNVTYNVLLSGLCKE 367
Query: 431 DFVNTSF 437
V +F
Sbjct: 368 GLVIDAF 374
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 6/294 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF--GMVDYT 210
A +IL MI G D T + ++ +C++ + DE L M C + +
Sbjct: 373 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV--DEALKLFNSMFDNENCLEPNVFTFN 430
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I L K+ ++ A+ I +M G ++V Y M+L G + +A EL+ ++L L
Sbjct: 431 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 490
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G VP+ +TY++ I+G CK + + M G P + YNTL+ +LCK L +
Sbjct: 491 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 550
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ L +EM ++ +++ MIDG GD L + + GL + F I
Sbjct: 551 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 610
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
L + G + +A L++M +P A V+++LL SK D T I L+ Q+
Sbjct: 611 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGD--TTEIINLLHQM 662
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 136/265 (51%), Gaps = 4/265 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGK--TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+V A+++ N M ++ C++ T ++++ +C++ L+ + + ++M K G C
Sbjct: 403 GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT--KAVKIHRKMVKKGSCGN 460
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ +K K+ +A+ + Q+ G P+ Y+++++G A+ LF
Sbjct: 461 LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFC 520
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL P ++ YN + LCK+ ++E + M +PD+I++NT++ K
Sbjct: 521 EMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAG 580
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++EL +M G+ + T+S +I+ L+ G++ EA LE + G + ++D
Sbjct: 581 DFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYD 640
Query: 386 ETICGLCQRGLVRKALELLKQMADK 410
+ GL +G + + LL QMA K
Sbjct: 641 SLLKGLSSKGDTTEIINLLHQMAAK 665
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A++I M+ G C + T +++L + + E + +++ LGF
Sbjct: 440 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIK--EAMELWKQVLDLGFVPNSF 497
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +I K + A G+ +M++ G+ P + Y ++ + + +A+ LF E+
Sbjct: 498 TYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 557
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PD+ ++N I+G K + + ++ M E+G +PD +T++TL+ L K+ EL
Sbjct: 558 GNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGEL 617
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + ++ M G + Y ++ GL+SKGD E LL + KG +
Sbjct: 618 DEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTI 677
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+ LC +ELL + S GA +
Sbjct: 678 LTCLCHSIQEVDVMELLPTFF-QGTSEGASI 707
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 95/218 (43%), Gaps = 2/218 (0%)
Query: 208 DYTNVIRSLVKK--EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
D +RSL +K + +A+ + + + P +++ + +Y A ++
Sbjct: 39 DLETQLRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYR 98
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ + ++P + + I + G ++ + + G +V N +L+ LC+
Sbjct: 99 RMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNG 158
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L++EM K + ++ +Y+ +I+GL + EA GLL E G S
Sbjct: 159 GVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCT 218
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ G + +A+ELL+ M K ++ L+
Sbjct: 219 TLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLI 256
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 159/320 (49%), Gaps = 9/320 (2%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
D + + + + K+ +F A ++L M G ++ T +++++ +C R +
Sbjct: 243 DVYTYSTLIEAYCKVREFDT-----AKKVLVEMRERGCGLNTVTYNVLIAGLC--RSGAV 295
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E GF ++M+ G Y +I L K + +A +L++M +KP++V Y +
Sbjct: 296 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 355
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G + + + +A ++ E++ G+ P+ TY+ + GLCK ++ ++ M
Sbjct: 356 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 415
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD ITYN +++ + L+ EM+ GI N+ TYSIMI GL G+ +A
Sbjct: 416 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
LLEE KGL + ++ I G C+ G V A E+ +M +V P + +L+ LS
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 535
Query: 426 SVSKLDFVNTSFIRLVDQIL 445
V +++ F ++ ++ L
Sbjct: 536 KVGRVEESTKYFAQMQERGL 555
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 154/361 (42%), Gaps = 21/361 (5%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y +I L ++ + S +L+ + + + F++ LI Y +
Sbjct: 452 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GLKPNAFVYAPLISGYCREGNVSLACE 510
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+F K+ K + + D +C + SLI R +E + +M
Sbjct: 511 IFDKMTKVNV-------------LPDLYCYN----SLIFGLSKVGR---VEESTKYFAQM 550
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
++ G Y+ +I +K + A ++ +M G+KP+ V Y +L +D
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 610
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
K F +L G++ D Y + I+ L N+EA ++++ +E+ GS PDV Y++L
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 670
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LCK + + ++ EM KG+ N+ Y+ +IDGL GDI A + L KGL
Sbjct: 671 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 730
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+ I G C+ G + A L +M ++P A V+ L S D F
Sbjct: 731 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 790
Query: 438 I 438
+
Sbjct: 791 L 791
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I +L + A +L+ ++ +G PD+ Y+ +++G+ D KA + DE+
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 691
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P++ YN I+GLCK ++ + + G P+ +TY +L+ CKV +++
Sbjct: 692 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 751
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L EM GI + YS++ G +S GD+ +A L+EE +G + SS F+ +
Sbjct: 752 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS-FNNLV 810
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
G C+RG +++ L+LL + + + P A E ++ LS KL V+T F+ L
Sbjct: 811 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 864
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 150/337 (44%), Gaps = 29/337 (8%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
+ I+IDL+++Y F+ + + M++ G +D + ++
Sbjct: 594 DVIYIDLLESY------------------FKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 635
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ ++ ++ + + ++K G + Y+++I L K A GIL++M
Sbjct: 636 IHNLSSSGNM--EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 693
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ P+IVCY +++G+ D A +F+ +L GLVP+ TY I+G CK ++
Sbjct: 694 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 753
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ M G PD Y+ L +L + L++EM +G ++ +++ ++DG
Sbjct: 754 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDG 812
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+G + E LL + +GL + + I GL + G + + + ++ K
Sbjct: 813 FCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESA 872
Query: 416 ARVWEALLLSSVSKLDFVNTSFIRL--VDQILNTPCK 450
AR + +L +D +N I L VD ++ CK
Sbjct: 873 ARHFSSLF------MDMINQGKIPLDVVDDMIRDHCK 903
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 2/263 (0%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
R+ ++DE ++EM G + Y N++R L K ++ A +L QM D +PD +
Sbjct: 361 REGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI 420
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++ G A L E+ G+ P+VYTY++ I+GLC+ E ++ M
Sbjct: 421 TYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 480
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G KP+ Y L+ C+ ++ E+ +M ++ +L Y+ +I GL+ G +
Sbjct: 481 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 540
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
E+ + +GL + I G + G + A +L+++M D + P ++ L
Sbjct: 541 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 600
Query: 423 LLSSVSKLDF--VNTSFIRLVDQ 443
L S D V+++F ++DQ
Sbjct: 601 LESYFKSDDIEKVSSTFKSMLDQ 623
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 139/287 (48%), Gaps = 4/287 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G DG T +++ +C+ R S+E + EM +V Y N+I +++
Sbjct: 309 GLVPDGFTYGALINGLCKSR--RSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 366
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A ++ +M + G++P+ + Y ++ G+ +A L +++ PD TYN+ I
Sbjct: 367 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 426
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
G + ++ + ++++ ME G P+V TY+ ++ LC+ E + +L++EM KG+
Sbjct: 427 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 486
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N Y+ +I G +G++ AC + ++ + ++ I GL + G V ++ +
Sbjct: 487 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 546
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
QM ++ + P + L+ + D S +LV ++L+T K
Sbjct: 547 FAQMQERGLLPNEFTYSGLIHGYLKNGDL--ESAEQLVQRMLDTGLK 591
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 4/214 (1%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQ----MKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
GM +L+K DA+ +L + M GI PD+ Y+ ++ ++ A
Sbjct: 204 GMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTA 263
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+++ E+ G + TYNV I GLC+ VE ME+ G PD TY L+
Sbjct: 264 KKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALING 323
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK R N + L+ EM + N+ Y+ +IDG +G+ EA +++E + G+
Sbjct: 324 LCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPN 383
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+D + GLC+ G + +A LLKQM P
Sbjct: 384 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRP 417
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 37/303 (12%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L M+ D D T +LI+ R S + + EM+ G + Y+ +I
Sbjct: 406 LLKQMVRDSHRPDTITYNLIIEG--HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHG 463
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L + + A +L +M + G+KP+ Y +++G + + A E+FD++ + ++PD
Sbjct: 464 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 523
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV- 334
+Y YN I GL K VE K A M+E G P+ TY+ L+ K +L +LV
Sbjct: 524 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 583
Query: 335 ----------------------------------KEMKWKGIVLNLQTYSIMIDGLASKG 360
K M +G++L+ + Y I+I L+S G
Sbjct: 584 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG 643
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
++ A +L G ++ I GLC+ KA +L +M+ K V P +
Sbjct: 644 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 703
Query: 421 ALL 423
AL+
Sbjct: 704 ALI 706
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 114/227 (50%), Gaps = 2/227 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y +I + DA +L++M++ GI P++ Y+++++G+ + KA +L +E
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ GL P+ + Y I+G C++ NV ++ M ++ PD+ YN+L+ L KV
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 539
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + +M+ +G++ N TYS +I G GD+ A L++ L+ GL ++ +
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ + + K K M D+ V R++ L+ LSS ++
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 139/276 (50%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RVG A+ +L+ M+ G T +++L +VC+ E + + EM+ G +V
Sbjct: 155 GRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFG--EAMNVLDEMRAKGCTPNIV 212
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + ++ +V DA ILN++ S G +PDIV YT VL G+ + + LF E+
Sbjct: 213 TYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEM 272
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ VP+ T+++ + C+ VE I+++ M + G P+ N ++ A+CK +
Sbjct: 273 VDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRV 332
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + + M G + +Y+ ++ GL G A LL E + K F+
Sbjct: 333 DDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTF 392
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
IC LCQ+GL+ +A++L++ M + S G + AL+
Sbjct: 393 ICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALV 428
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 112/215 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +IR L + +V DAL +L+ M G +P +V YT++L V + +A + DE+
Sbjct: 144 YTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMR 203
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P++ TYNV ING+C++ V+ +++ + G +PD+++Y T+L+ LC R +
Sbjct: 204 AKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWD 263
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ L EM K V N T+ +++ G + A +L++ G +++ + I
Sbjct: 264 DVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVI 323
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+C++G V A + L M +P + +L
Sbjct: 324 NAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 358
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 170/397 (42%), Gaps = 56/397 (14%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP+AY + +I+ L + + D ++LD + +R + + L++ + F +++
Sbjct: 138 PPDAYTYTPIIRGLCDRGRVGDALALLDDMLQR-GCQPSVVTYTVLLEAVCKSSGFGEAM 196
Query: 137 NLFYKI------PKF-----------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
N+ ++ P R RV A EILN + + GF D + + +L +
Sbjct: 197 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 256
Query: 180 CEQR--------------------DLSSDELLGF-------------VQEMKKLGFCFGM 206
C R +++ D L+ F +Q+M + G
Sbjct: 257 CAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNT 316
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
VI ++ K+ +V DA LN M G PD + YT VL G+ + A+EL E
Sbjct: 317 TLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPE 376
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ P+ T+N +I LC++ +E IK+I M E G ++TYN L+ C
Sbjct: 377 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR 436
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ EL + + N TY+ ++ GL + A LL + K + F+
Sbjct: 437 VDSALELFNNLPCEP---NTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNV 493
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ CQ+G V +A+EL+ QM + +P + LL
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 530
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 175/376 (46%), Gaps = 35/376 (9%)
Query: 37 QAKQNVKQSLTTPPTK----QQQQIPKQPHILSS--LLHSFSIYNCEPPPEAYHFVIKTL 90
Q Q + Q TP T I KQ + + L++ +Y C P +Y V++ L
Sbjct: 302 QVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGL 361
Query: 91 AENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRV 150
++ +L + R+N E F I + ++ L +P++ +
Sbjct: 362 CRAGRWEHAKELLPEM-VRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCS-- 418
Query: 151 GFAIEILNCMINDGFCVDGK------------------TCSLILSSVC--EQRDLSSDEL 190
I N +++ GFCV G+ T + +L+ +C E+ D +++ L
Sbjct: 419 -VGIVTYNALVH-GFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELL 476
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
G +Q+ L V + ++ +K V +A+ ++NQM G P+++ + +L+G
Sbjct: 477 AGMIQKDCPLN----AVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDG 532
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + +A EL L+ G+ D TY+ ++ L +++ E I+M+ ++++G +P
Sbjct: 533 ITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPK 592
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V YN +L ALCK E ++ + M G + N TY I+I+GLA +G + EA +L
Sbjct: 593 VGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLS 652
Query: 371 EALNKGLCTQSSMFDE 386
E KG+ ++S + D+
Sbjct: 653 ELYAKGVLSKSLLEDQ 668
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 165/412 (40%), Gaps = 58/412 (14%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
++L C P Y+ +I + + D +L+ + F+ + ++K
Sbjct: 197 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY-GFQPDIVSYTTVLKG 255
Query: 126 YADAHRFQDSVNLFYKI--PKFRINRVGF---------------AIEILNCMINDGFCVD 168
A R+ D LF ++ K N V F AI++L M G +
Sbjct: 256 LCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPN 315
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK---------- 218
C+++++++C+Q + D+ F+ M G + YT V+R L +
Sbjct: 316 TTLCNIVINAICKQGRV--DDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKEL 373
Query: 219 -----------KEKVFD--------------ALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
E F+ A+ ++ M G IV Y +++G V
Sbjct: 374 LPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCV 433
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
Q A ELF+ L P+ TY + GLC ++A +++A M + + +T
Sbjct: 434 QGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVT 490
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
+N L+ C+ + ELV +M G NL T++ ++DG+ + EA LL +
Sbjct: 491 FNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLV 550
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+KG+ + + + L + +A+++L + D + P ++ +L +
Sbjct: 551 SKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 602
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 113/236 (47%), Gaps = 3/236 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
++ + ++ M + G G+V Y ++ + +V AL + N + + P+ + YT +
Sbjct: 403 EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTL 459
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L G+ E A EL ++ + T+NV ++ C++ VE ++++ M E G
Sbjct: 460 LTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC 519
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P++IT+NTLL + K EL+ + KG+ L+ TYS ++D L+ + EA
Sbjct: 520 TPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQ 579
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L + G+ + M+++ + LC+R +A++ M P + L+
Sbjct: 580 MLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 635
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 116/260 (44%), Gaps = 33/260 (12%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDG--------------------------------I 237
T +IR+L ++ + DA +L ++ G +
Sbjct: 78 TKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPV 137
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PD YT ++ G+ + A L D++L G P V TY V + +CK + +
Sbjct: 138 PPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMN 197
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M G P+++TYN ++ +C+ ++ +E++ + G ++ +Y+ ++ GL
Sbjct: 198 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLC 257
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ + L E ++K FD + C+ G+V +A+++L+QM+ +P
Sbjct: 258 AARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTT 317
Query: 418 VWEALLLSSVSKLDFVNTSF 437
+ ++++++ K V+ ++
Sbjct: 318 LCN-IVINAICKQGRVDDAY 336
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L +I ++D +A L + G PDVY I LC++ +++ E G+
Sbjct: 46 LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
DV YNTL+ C+ L+ R L+ M + + TY+ +I GL +G + +A
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALA 162
Query: 368 LLEEALNKGLCTQSSMFDETIC--GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL++ L +G Q S+ T+ +C+ +A+ +L +M K +P + ++
Sbjct: 163 LLDDMLQRG--CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVII 218
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 4/276 (1%)
Query: 149 RVGFAIEILNCMINDGFCVD-GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI N + G D G C+L+L +C+ + + E + + EM + GF
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLG-LCKVEEFEAGEEM--MNEMIEFGFVPSEA 321
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+N++ L KK + A ++N++K G+ P + Y ++N + +AE LF+ +
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GL P+ TY++ I+ CK+ ++ + + M E+G K V Y++L+ CK+ +L
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L EM G+ N+ Y+ +I G +G++ A L E KG+ + F
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC + +A +L +M + +V P + L+
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLI 537
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 138/279 (49%), Gaps = 4/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD-LSSDELLGFVQEMKKLGFCF 204
RI + A+ + + +++ G D + ++ S+CE +D + + E++G M+ G
Sbjct: 192 RIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG---RMESSGCDL 248
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y IR L K ++V++A+ I N + G++ D+ Y ++ G+ E++ EE+
Sbjct: 249 SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+E++ G VP + ++GL K+ N+ + ++ +++ G P + YN L+ ++CK
Sbjct: 309 NEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD 368
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L+ L M KG+ N TYSI+ID +G + A L + G+ +
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPY 428
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ G +R A L +M + P ++ +L+
Sbjct: 429 SSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLI 467
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 162/349 (46%), Gaps = 24/349 (6%)
Query: 98 DISSVLDHIEKRENFETPE--FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
+I S D + K + F F++ LI + + ++ +LF
Sbjct: 335 NIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF---------------- 378
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
N M + G + T S+++ S C++ L D L F+ +M ++G + Y+++I
Sbjct: 379 --NNMGHKGLFPNDVTYSILIDSFCKRGKL--DVALHFLGKMTEVGIKATVYPYSSLISG 434
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K K+ A + ++M ++G+KP++V YT +++G + + A L+ E+ G+ P+
Sbjct: 435 HCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPN 494
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
YT+ I+GLC N + K+ M E P+ +TYN L++ CK R EL+
Sbjct: 495 TYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLD 554
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG+V + TY +I GL S G + EA + + + F + G C+ G
Sbjct: 555 EMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEG 614
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ AL+ ++M + V+ + L+ + + D S I L+ Q+
Sbjct: 615 RLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD--RRSIIDLLKQM 661
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 166/353 (47%), Gaps = 34/353 (9%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGF---------------AIEILNC 159
+ F LI A+R ++ LF ++ ++ + N V + A E+L+
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555
Query: 160 MINDGFCVDGKTCSLILSSVC------EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
M+ G D T ++S +C E R+ +D L G Q++ ++ CF + ++
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND-LQGEQQKLNEM--CF-----SALL 607
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
K+ ++ DAL +M G+ D+VCY++++ G++ Q+D +L ++ GL
Sbjct: 608 HGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR 667
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PD Y I+ K N++ + M G P+V+TY L+ LCK+ +++ L
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELL 727
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+EM + N TY+ +D L S+G+I +A L + L +G + ++ I G C+
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCK 786
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
G +++A E+L M D +SP + ++ + D I+L + +LN
Sbjct: 787 LGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA--IKLWESMLN 837
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 8/285 (2%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A++ M+ G +D S+++ + Q+D S ++ +++M G V
Sbjct: 615 RLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRS--IIDLLKQMHDQGLRPDNVL 672
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +I + K + A G+ + M S+G P++V YT ++NG+ KAE L E+L
Sbjct: 673 YTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 732
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+P+ TY +++ L + N+E I++ + E G + +TYN L++ CK+ +
Sbjct: 733 ASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQ 791
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E++ M GI + +YS +I +GD+ EA L E LN+G+ + ++ I
Sbjct: 792 EAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLI 851
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEAL-----LLSSVS 428
G C G + KA EL M + V P + +L L+SSVS
Sbjct: 852 YGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVS 896
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 3/252 (1%)
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
LI + V +R+L L V+ M G + + V+ L++ + AL + +++
Sbjct: 151 LIQTYVQNRRELDG---LVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
S G++PD+ YT V+ + +D+++A E+ + G V TYNV+I GLCK V
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++ + G + DV TY TL+ LCKV E E++ EM G V + S ++
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DGL KG+I A L+ + G+ +++ I +C+ G + +A L M K +
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387
Query: 414 PGARVWEALLLS 425
P + L+ S
Sbjct: 388 PNDVTYSILIDS 399
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 131/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ ++ A + + MI +G + + ++S C++ +L + L EM G
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL--YHEMTGKGISPN 494
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+T +I L ++ +A + +M + P+ V Y +++ G + + V+A EL D
Sbjct: 495 TYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLD 554
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ GLVPD YTY I+GLC V + + ++ K + + ++ LL CK
Sbjct: 555 EMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEG 614
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L+ + +EM +G+ ++L YS++I G+ + D LL++ ++GL + ++
Sbjct: 615 RLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYT 674
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G ++ A L M + P + AL+
Sbjct: 675 TMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALI 712
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 17/149 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-------GFCFG 205
AI++ + ++ +GF + T ++++ C+ LG +QE ++ G
Sbjct: 759 AIQLHDVLL-EGFLANTVTYNILIRGFCK---------LGRIQEAAEVLVNMIDSGISPD 808
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+ +I ++ + +A+ + M + G+ PD V Y ++ G V + KA EL D
Sbjct: 809 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRD 868
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+++ G+ P+ TYN I+G C ++V +
Sbjct: 869 DMMRRGVKPNRATYNSLIHGTCLMSSVSS 897
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 148/306 (48%), Gaps = 37/306 (12%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++L MI DG ++ ++++ + + L D+ + EM++ GF +V YT VI
Sbjct: 281 DLLALMIQDGIPLEDHVFNILIRAYAKNETL--DKAMTAFIEMRQKGFSPNVVTYTTVID 338
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL----------- 263
L K +V DA+ +QM S+G+ PDI+ +T +++G+ ++ K E+L
Sbjct: 339 ILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHP 398
Query: 264 ------------------------FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
FD+++ +G+ PDV +Y + I+G C ++ IK++
Sbjct: 399 NAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLL 458
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M +G +PD +TY+ LL CK ++ L +EM K + N TY+I++ GL
Sbjct: 459 GRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHA 518
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
G ++ A + ++ G+ + ++ + GLC+ V +AL + + + K+ R +
Sbjct: 519 GRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTF 578
Query: 420 EALLLS 425
+++
Sbjct: 579 NIMIVG 584
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 156/348 (44%), Gaps = 23/348 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYK 141
++ +I+ A+N + IE R+ +P + + +I A R +D+V+ F +
Sbjct: 298 FNILIRAYAKNETLDKAMTAF--IEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQ 355
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
M+++G D T + ++ +C + E L F EM G
Sbjct: 356 ------------------MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSF--EMINRG 395
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+ ++ SL K+ +V +A +Q+ G+KPD+V YT++++G + ++
Sbjct: 396 IHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESI 455
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+L ++ +GL PD TY+ +NG CK V+ + + M KP+ ITYN +L L
Sbjct: 456 KLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGL 515
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
+ RE ++ GI L + TY+I++ GL + EA + + +K +
Sbjct: 516 FHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEV 575
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
F+ I GL + G + A L + + P A ++ ++ S + +
Sbjct: 576 RTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEE 623
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 152/385 (39%), Gaps = 40/385 (10%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
YNC P +Y+ VI L + + D + L H + F + +I A
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGE-VDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMD 191
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+ + ++ F ++ A+ +L M G D T SL++ C+ + E
Sbjct: 192 KAEAVLQQM--FDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCT--EARNI 247
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
M + G Y ++ K + D +L M DGI + + +++
Sbjct: 248 FDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAK 307
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
E KA F E+ G P+V TY I+ LCK VE + + M G PD+IT
Sbjct: 308 NETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIIT 367
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLN---------------------------- 345
+ +L+ LC + E ++ +L EM +GI N
Sbjct: 368 FTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQII 427
Query: 346 -------LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+ +Y+I+IDG G + E+ LL ++ GL + + + G C+ G V
Sbjct: 428 HVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVD 487
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
AL L ++M KDV P A + +L
Sbjct: 488 DALALYREMFSKDVKPNAITYNIIL 512
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 17/267 (6%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+C+DGK DE + + M +G V Y+ ++ K +V
Sbjct: 443 DGYCLDGKM----------------DESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRV 486
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DAL + +M S +KP+ + Y ++L+G+ V A E + +++ G+ + TYN+
Sbjct: 487 DDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIV 546
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
+ GLC+ + V+ ++M + + +V T+N ++ L KV + + L + G+
Sbjct: 547 LGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGL 606
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
V + Y +MI +G + E+ L G S + + L ++G VR+A
Sbjct: 607 VPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGT 666
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSK 429
L ++ +K+ S A LL+S VS+
Sbjct: 667 YLTKIDEKEYSVEAST-AVLLISIVSE 692
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 151/313 (48%), Gaps = 37/313 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R NRV A+ +++ M+ G+ D + I+ S+C+ + + ++ F +E+++ G
Sbjct: 270 RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV--NDAFDFFKEIERKGIRPN 327
Query: 206 MVDYTNVIRSL-----------------------------------VKKEKVFDALGILN 230
+V YT ++ L VK KV +A +
Sbjct: 328 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 387
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M I PDIV Y+ ++NG+ + + +A ++FD ++ G + DV +YN ING CK
Sbjct: 388 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 447
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
VE G+K+ M + G + +TYNTL+Q + ++++ +E +M + GI ++ TY+
Sbjct: 448 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 507
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ GL G++ +A + E+ + + + I G+C+ G V +A L ++ K
Sbjct: 508 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 567
Query: 411 DVSPGARVWEALL 423
+ P + ++
Sbjct: 568 GLKPDIVTYTTMM 580
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 131/249 (52%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I+ +C+ + + D+ L +EM+ G +V Y+++I L + DA +L+ M
Sbjct: 876 IIDGLCKYKHM--DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 933
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
I PD+ ++ +++ + + V+AE+L+DE++ + P + TY+ ING C + ++
Sbjct: 934 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+M M PDV+TYNTL++ CK + + E+ +EM +G+V N TY+I+I
Sbjct: 994 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 1053
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL GD A + +E ++ G+ ++ + GLC+ G + KA+ + + + + P
Sbjct: 1054 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113
Query: 415 GARVWEALL 423
+ ++
Sbjct: 1114 TIYTYNIMI 1122
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N G + T S++++ C + L L + +M KLG+
Sbjct: 707 KMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPL--ALAVLGKMMKLGYEPN 764
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++++ +++ +A+ +++QM G +P+ V + +++G+ + +A L D
Sbjct: 765 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 824
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G PD+ TY V +NGLCK+ + + ++ ME+ +P V+ YNT++ LCK +
Sbjct: 825 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 884
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L KEM+ KGI N+ TYS +I L + G +A LL + + + + F
Sbjct: 885 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 944
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G + +A +L +M + + P + +L+
Sbjct: 945 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 982
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+ IL M+ G+ D T +++ C + +S + + V +M ++G+ +V
Sbjct: 238 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVS--DAVSLVDKMVEIGYKPDIVA 295
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I SL K ++V DA +++ GI+P++V YT ++NG+ + A L +++
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 355
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ P+V TY+ ++ K V ++ M + PD++TY++L+ LC ++
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 415
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ M KG + ++ +Y+ +I+G + + L E +GL + + ++ I
Sbjct: 416 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 475
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G Q G V KA E QM +SP + LL
Sbjct: 476 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 510
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 139/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ + T S +L+ C + +S E + V +M G+
Sbjct: 742 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS--EAVALVDQMFVTGYQPN 799
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V + +I L K +A+ ++++M + G +PD+V Y +V+NG+ + D A L +
Sbjct: 800 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 859
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ L P V YN I+GLCK +++ + + ME G +P+V+TY++L+ LC
Sbjct: 860 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 919
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I ++ T+S +ID +G ++EA L +E + + + +
Sbjct: 920 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 979
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A ++ + M K P + L+
Sbjct: 980 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 1017
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 165/372 (44%), Gaps = 42/372 (11%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P AY+ +I +L + + D IE R+ + L+ ++ R+ D+
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIRPNVVTYTALVNGLCNSSRWSDAA 348
Query: 137 NLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGK----------------TCSLILSS 178
L + K +I N + ++ +L+ + +G ++ K T S +++
Sbjct: 349 RLLSDMIKKKITPNVITYS-ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C + DE M G +V Y +I K ++V D + + +M G+
Sbjct: 408 LCLHDRI--DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
+ V Y ++ G D KA+E F ++ G+ PD++TYN+ + GLC +E + +
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M++ D++TY T+++ +CK ++ L + KG+ ++ TY+ M+ GL +
Sbjct: 526 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 585
Query: 359 KGDIIEACGLL----EEALNKGLCTQS----SMFDETI-----CGLC-------QRGLVR 398
KG + E L +E L K CT S ++ E I CG + G+ +
Sbjct: 586 KGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCK 645
Query: 399 KALELLKQMADK 410
KAL LL+ + K
Sbjct: 646 KALSLLRAFSGK 657
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 153/332 (46%), Gaps = 25/332 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P Y +I L ++ D S +L D IE++ N + F F LI + + ++
Sbjct: 903 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV--FTFSALIDAFVKEGKLVEAE 960
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
L+ ++ K I+ +I + +IN GFC+ R + ++ F+
Sbjct: 961 KLYDEMVKRSIDP---SIVTYSSLIN-GFCM-------------HDRLDEAKQMFEFMVS 1003
Query: 197 MKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
CF +V Y +I+ K ++V + + + +M G+ + V Y +++ G+
Sbjct: 1004 KH----CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
D A+E+F E++ G+ P++ TYN ++GLCK +E + + ++ +P + TYN
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 1119
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+++ +CK ++ +L + KG+ ++ Y+ MI G KG EA L +E
Sbjct: 1120 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G S ++ I + G + EL+K+M
Sbjct: 1180 GTLPNSGCYNTLIRARLRDGDREASAELIKEM 1211
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 170/395 (43%), Gaps = 60/395 (15%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+L+ C+P Y V+ L + ++L+ +E+ + E I+ +I
Sbjct: 821 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDG 879
Query: 126 YADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
D++NLF ++ R N V ++ +++C+ N G D S +LS + E R
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYS-SLISCLCNYGRWSDA---SRLLSDMIE-R 934
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
++ D + ++ +I + VK+ K+ +A + ++M I P IV
Sbjct: 935 KINPD-----------------VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 977
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ ++NG + + +A+++F+ ++ PDV TYN I G CK VE G+++ M
Sbjct: 978 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 1037
Query: 304 ELG-----------------------------------SKPDVITYNTLLQALCKVRELN 328
+ G P+++TYNTLL LCK +L
Sbjct: 1038 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 1097
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ + + ++ + + TY+IMI+G+ G + + L KG+ ++ I
Sbjct: 1098 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 1157
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C++G +A L K+M + P + + L+
Sbjct: 1158 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 1192
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 4/228 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ ++M+ LG + + VI +V AL IL +M G +PD V +
Sbjct: 205 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 264
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG + A L D+++ +G PD+ YN I+ LCK V +E G
Sbjct: 265 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 324
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+V+TY L+ LC + L+ +M K I N+ TYS ++D G ++EA
Sbjct: 325 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 384
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L EE + + + I GLC + +A QM D VS G
Sbjct: 385 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA----NQMFDLMVSKG 428
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 37/260 (14%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
K+ DA+ + + M P IV + +L+ ++ + Y L ++ VLG+ D+YT+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 281 VYI-----------------------------------NGLCKQNNVEAGIKMIACMEEL 305
+ I NG C++N V + ++ M E+
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G KPD++ YN ++ +LCK + +N + KE++ KGI N+ TY+ +++GL + +A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL-- 423
LL + + K + + + + G V +A EL ++M + P + +L+
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407
Query: 424 LSSVSKLDFVNTSFIRLVDQ 443
L ++D N F +V +
Sbjct: 408 LCLHDRIDEANQMFDLMVSK 427
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 115/240 (47%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+L D+ + EM K +++++ ++ ++ K K + + QM++ GI +
Sbjct: 673 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 732
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y++++N + A + +++ LG P++ T + +NG C + + ++ M
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G +P+ +T+NTL+ L + + L+ M KG +L TY ++++GL +GD
Sbjct: 793 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL + L +++ I GLC+ + AL L K+M K + P + +L+
Sbjct: 853 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 104/210 (49%)
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R+ + + K+ DA+ + +M P I+ ++ +L+ + + L +++ LG+
Sbjct: 668 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
+ YTY++ IN C+++ + + ++ M +LG +P+++T ++LL C + ++ L
Sbjct: 728 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V +M G N T++ +I GL EA L++ + KG + + GLC+
Sbjct: 788 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
RG A LL +M + PG ++ ++
Sbjct: 848 RGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 179/385 (46%), Gaps = 25/385 (6%)
Query: 61 PHI--LSSLLHSFS-IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF 117
PH L L SF+ + + PPP F K L ++ S+VL + ++F P
Sbjct: 88 PHFNTLDDALSSFNRMLHMHPPPSTVDFT-KLLTSIAKMKHYSTVLSLSTQMDSFGIPPD 146
Query: 118 IFI--DLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILN 158
++ LI ++ R + ++ K+ K ++G A+ + +
Sbjct: 147 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFD 206
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
I +GF D T +++ +C+ + S+ + ++ M + ++ Y +I SL K
Sbjct: 207 KTIGEGFQPDVVTYGTLMNGLCKVGNTSAA--IRLLRSMVQKNCRPNVIAYNTIIDSLCK 264
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+V +A + ++M + GI PDI Y +++ + ++ L +E++ ++P+V
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 324
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
++ ++ LCK+ + ++ M + G +PDV+TY L+ C E++ ++ M
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KG V N+++Y+I+I+G + +A GLLE+ +GL + ++ I GLC G ++
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 444
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
A+ L +M P + LL
Sbjct: 445 HAIALFHEMVASGQIPDLVTYRILL 469
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 8/259 (3%)
Query: 153 AIEILNCMINDGFCVDGKTC-SLI--LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
A + + MI G D T SLI L ++CE + +++ + EM +V +
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTT-----LLNEMVNSKIMPNVVVF 325
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ V+ +L K+ + A +++ M G++PD+V YT +++G ++ + +A ++FD ++
Sbjct: 326 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G VP+V +YN+ ING C+ ++ + ++ M G D +TYNTL+ LC V L
Sbjct: 386 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 445
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L EM G + +L TY I++D L + EA LL+ L +++ I
Sbjct: 446 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 505
Query: 390 GLCQRGLVRKALELLKQMA 408
G+C+ G + A +L ++
Sbjct: 506 GMCRAGELEAARDLFSNLS 524
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 131/299 (43%), Gaps = 21/299 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S NC P AY+ +I +L ++ Q + ++ + + F + LI
Sbjct: 239 LLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK-GISPDIFTYNSLIHAL 297
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ ++ L LN M+N + S ++ ++C++ ++
Sbjct: 298 CNLCEWKHVTTL------------------LNEMVNSKIMPNVVVFSTVVDALCKEGMIA 339
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
V M K G +V YT ++ + ++ +A+ + + M G P++ Y +
Sbjct: 340 IAH--DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 397
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG + KA L +++ + GL+ D TYN I+GLC ++ I + M G
Sbjct: 398 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 457
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
PD++TY LL LCK L L+K ++ + ++ Y+I IDG+ G++ A
Sbjct: 458 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 516
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 32/301 (10%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD----ELL---------- 191
R + ++ L CM++ G+ D C+ ++ R++ E+L
Sbjct: 81 RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFA 140
Query: 192 ------GFVQ------------EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
GF++ MK GF +V Y +I S + K+ AL I ++
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
D +P ++ YT+++ I+ A +L DE+L GL PD TYN I G+CK+ V+
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++ + G KPD+ITYN LL+ L + + +L+ EM G N+ T+SI+I
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L G + EA LL KGL + +D I G C+ G + A E L+ M
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCL 380
Query: 414 P 414
P
Sbjct: 381 P 381
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 174/366 (47%), Gaps = 20/366 (5%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P AY+ +I + +Q + + VLD ++ R F + +I ++ + ++
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSR-GFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 137 NLFYKIPK---------FRI--------NRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
+F ++ K + I + A+++L+ M++ G D T + I+ +
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C +++ D+ ++ + G ++ Y ++R+L+ + K + ++++M S G KP
Sbjct: 254 C--KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKP 311
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++V +++++ + +A L + GL PD Y Y+ I G C++ ++ + +
Sbjct: 312 NVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFL 371
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M G PD++ YNT++ LC+ + ++ E+ +++ G N+ +Y+ + L S
Sbjct: 372 EYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSS 431
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
GD A ++ + LN+G+ ++ I LC+ G+V +A+ELL M P +
Sbjct: 432 GDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSY 491
Query: 420 EALLLS 425
+LL
Sbjct: 492 NIILLG 497
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 133/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L + + G D T +++L ++ + S E L + EM +G +V ++ +
Sbjct: 262 AFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKL--ISEMISIGCKPNVVTHSIL 319
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +L + KV +A+ +L MK G+KPD CY ++ G + A E + ++ G
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD+ YN + GLC+ + +++ ++E+G P+V +YNTL AL + R E
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ ++ +GI + TY+ +I L G + EA LL + + ++ + GLC
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ A+E+L M +K P + L+
Sbjct: 500 KVNRANDAIEVLAAMTEKGCQPNETTYILLI 530
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 124/251 (49%), Gaps = 3/251 (1%)
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
L F F V ++ + K ++L L M G PD++ T ++ G + K
Sbjct: 63 LSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGK 122
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A + + L G PDV+ YN I+G K N +E +++ M+ G PDV+TYN ++
Sbjct: 123 ATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIG 181
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
+ C +L+ E+ +E+ + TY+I+I+ G I A LL+E L+KGL
Sbjct: 182 SFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEP 241
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIR 439
+ ++ I G+C+ +V KA ELL+ ++ + P + LL + +S+ + +
Sbjct: 242 DTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGE--K 299
Query: 440 LVDQILNTPCK 450
L+ ++++ CK
Sbjct: 300 LISEMISIGCK 310
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 27/302 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCD---ISSVLDHIEKRENFETPEFIFIDLI 123
LL S S C+P Y+ +++TL ++ + + S + I + N T LI
Sbjct: 265 LLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI----LI 320
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
T + +++VNL + + + + + L GFC +G+
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIA----GFCREGRL------------ 364
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
DL+++ F++ M G +V+Y ++ L + K AL + ++ G P++
Sbjct: 365 DLATE----FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSS 420
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y + + + D +A E+ +LL G+ PD TYN I+ LC+ V+ I+++ M+
Sbjct: 421 YNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQ 480
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+P+V++YN +L LCKV N E++ M KG N TY ++I+G+ G
Sbjct: 481 SGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRA 540
Query: 364 EA 365
EA
Sbjct: 541 EA 542
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 124/272 (45%), Gaps = 38/272 (13%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E L F++ M G+ ++ T +I+ + A ++ ++ G KPD+ Y +
Sbjct: 86 NESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNAL 144
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ------------------ 289
++G I A + D + G +PDV TYN+ I C +
Sbjct: 145 ISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNC 204
Query: 290 -----------------NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
++ +K++ M G +PD +TYN +++ +CK +++ E
Sbjct: 205 EPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFE 264
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG-L 391
L++ + +G ++ TY+I++ L S+G E L+ E ++ G C + + + G L
Sbjct: 265 LLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG-CKPNVVTHSILIGTL 323
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G V +A+ LL+ M +K + P A ++ L+
Sbjct: 324 CRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLI 355
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 2/237 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S+++ ++C RD +E + ++ MK+ G Y +I ++ ++ A L
Sbjct: 315 THSILIGTLC--RDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M SDG PDIV Y ++ G+ +A E+F++L +G P+V +YN + L
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ ++MI + G PD ITYN+L+ LC+ ++ EL+ +M+ N+ +Y+
Sbjct: 433 DRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYN 492
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I++ GL +A +L KG + + I G+ GL +A+EL +
Sbjct: 493 IILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C++ ++ + + K G +V Y
Sbjct: 111 GFYQEILEC----GYPASLYFFNILMHRFCKEGNIRVAQ--SVFDAITKWGLRPSVVSYN 164
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + +A ELFDE+LV
Sbjct: 165 TLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVX 224
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 225 GLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQA 284
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 285 HVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 344
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M P R + ++
Sbjct: 345 LCQEGRSVDAEKMLREMLSVGXKPDTRTYTMII 377
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G G T + ++ C+ + D + ++M ++ Y +
Sbjct: 214 ANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLLPDLITYNTL 271
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++ +M G KPD + YT +++G + D A E ++ +
Sbjct: 272 IYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENI 331
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ +
Sbjct: 332 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSK 391
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 392 LLKEMQRDGHVPSVVTYNVLMNG 414
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 149/322 (46%), Gaps = 33/322 (10%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV--------------GFAIE 155
++F LI Y ++ +D++ F ++P +V GF E
Sbjct: 67 YVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKE 126
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL---GFVQEMKKLGFCFGMVDYTNV 212
IL C G SL ++ R E+ + K G +V + +
Sbjct: 127 ILEC---------GYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTL 177
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ ++ + + N M + G++PD+ Y++++NG+ + +A +LF+E+L GL
Sbjct: 178 MNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGL 237
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VP+ T+ I+G CK V++ ++ M PD+ITYNTL+ LCK +L + ++
Sbjct: 238 VPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQD 297
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ EM+ KG+ + TY+ +IDG +GD+ A L E + + + + I GLC
Sbjct: 298 LLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLC 357
Query: 393 QRGLVRKALELLKQMADKDVSP 414
Q G A ++L++M + P
Sbjct: 358 QEGRATDAEKMLREMLSVGLKP 379
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ +A + N+M G+ P+ V +T +++G A E + ++L
Sbjct: 209 YSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+PD+ TYN I GLCK+ +++ ++ M G KPD ITY TL+ CK +L+
Sbjct: 269 SQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLD 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL + M + I L+ Y+ +I GL +G +A +L E L+ GL + + I
Sbjct: 329 SAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
C++ V+ A +LLK+M + P
Sbjct: 389 NEFCKKEDVKTAAKLLKEMQRQGHVP 414
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + ++ N M G D T S++++ +C++ + +E EM G
Sbjct: 183 RLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKM--NEANDLFNEMLDKGLVPN 240
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K KV A+ QM S PD++ Y ++ G+ + D +A++L D
Sbjct: 241 GVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLD 300
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ ++++ ++ M + + D + Y L+ LC+
Sbjct: 301 EMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEG 360
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ K D+ A LL+E +G
Sbjct: 361 RATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ N M++ G +G T + ++ C+ + D + ++M F ++ Y +
Sbjct: 225 ANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKV--DSAMETYKQMLSQCFLPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A +L++M+ G+KPD + YT +++G + D A EL + ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAK 402
Query: 333 LVKEMKWKGIV 343
L+KEM+ +G V
Sbjct: 403 LLKEMQRQGHV 413
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A+E M++ F D T + ++ +C++ DL + L + EM+ G +
Sbjct: 255 GKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDL--LDEMRMKGLKPDKI 312
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A + M + I+ D V YT +++G+ + AE++ E+
Sbjct: 313 TYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREM 372
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L +GL PD TY + IN CK+ +V+ K++ M+ G P V+T
Sbjct: 373 LSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 159/320 (49%), Gaps = 9/320 (2%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
D + + + + K+ +F A ++L M G ++ T +++++ +C R +
Sbjct: 116 DVYTYSTLIEAYCKVREFDT-----AKKVLVEMRERGCGLNTVTYNVLIAGLC--RSGAV 168
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E GF ++M+ G Y +I L K + +A +L++M +KP++V Y +
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G + + + +A ++ E++ G+ P+ TY+ + GLCK ++ ++ M
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD ITYN +++ + L+ EM+ GI N+ TYSIMI GL G+ +A
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
LLEE KGL + ++ I G C+ G V A E+ +M +V P + +L+ LS
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408
Query: 426 SVSKLDFVNTSFIRLVDQIL 445
V +++ F ++ ++ L
Sbjct: 409 KVGRVEESTKYFAQMQERGL 428
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 124/234 (52%), Gaps = 3/234 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I +L + A +L++++ +G PD+ Y+ +++G+ D KA + DE+
Sbjct: 505 YGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 564
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P++ YN I+GLCK ++ + + G P+ +TY +L+ CKV +++
Sbjct: 565 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 624
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L EM GI + YS++ G +S GD+ +A L+EE +G + SS F+ +
Sbjct: 625 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS-FNNLV 683
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
G C+RG +++ L+LL + + + P A E ++ LS KL V+T F+ L
Sbjct: 684 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 737
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 154/361 (42%), Gaps = 21/361 (5%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y +I L ++ + S +L+ + + + F++ LI Y +
Sbjct: 325 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GLKPNAFVYAPLISGYCREGNVSLACE 383
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+F K+ K + + D +C + SLI R +E + +M
Sbjct: 384 IFDKMTKVNV-------------LPDLYCYN----SLIFGLSKVGR---VEESTKYFAQM 423
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
++ G Y+ +I +K + A ++ +M G+KP+ V Y +L +D
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 483
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
K F +L G++ D Y + I+ L N+EA ++++ +E+ GS PDV Y++L
Sbjct: 484 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSL 543
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LCK + + ++ EM KG+ N+ Y+ +IDGL GDI A + L KGL
Sbjct: 544 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 603
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+ I G C+ G + A L +M ++P A V+ L S D F
Sbjct: 604 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 663
Query: 438 I 438
+
Sbjct: 664 L 664
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 151/337 (44%), Gaps = 29/337 (8%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
+ I+IDL+++Y F+ + + M++ G +D + ++
Sbjct: 467 DVIYIDLLESY------------------FKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 508
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ ++ ++ + + E++K G + Y+++I L K A GIL++M
Sbjct: 509 IHNLSSSGNM--EAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 566
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ P+IVCY +++G+ D A +F+ +L GLVP+ TY I+G CK ++
Sbjct: 567 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 626
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ M G PD Y+ L +L + L++EM +G ++ +++ ++DG
Sbjct: 627 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDG 685
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+G + E LL + +GL + + I GL + G + + + ++ K
Sbjct: 686 FCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESA 745
Query: 416 ARVWEALLLSSVSKLDFVNTSFIRL--VDQILNTPCK 450
AR + +L +D +N I L VD ++ CK
Sbjct: 746 ARHFSSLF------MDMINQGKIPLDVVDDMIRDHCK 776
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 2/263 (0%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
R+ ++DE ++EM G + Y N++R L K ++ A +L QM D +PD +
Sbjct: 234 REGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI 293
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++ G + A L E+ G+ P+VYTY++ I+GLC+ E ++ M
Sbjct: 294 TYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEM 353
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G KP+ Y L+ C+ ++ E+ +M ++ +L Y+ +I GL+ G +
Sbjct: 354 TTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 413
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
E+ + +GL + I G + G + A +L+++M D + P ++ L
Sbjct: 414 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 473
Query: 423 LLSSVSKLDF--VNTSFIRLVDQ 443
L S D V+++F ++DQ
Sbjct: 474 LESYFKSDDIEKVSSTFKSMLDQ 496
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 139/287 (48%), Gaps = 4/287 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G DG T +++ +C+ R S+E + EM +V Y N+I +++
Sbjct: 182 GLVPDGFTYGALINGLCKSR--RSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 239
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A ++ +M + G++P+ + Y ++ G+ +A L +++ PD TYN+ I
Sbjct: 240 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 299
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
G + +N + ++++ ME G P+V TY+ ++ LC+ E + +L++EM KG+
Sbjct: 300 EGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 359
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N Y+ +I G +G++ AC + ++ + ++ I GL + G V ++ +
Sbjct: 360 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 419
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
QM ++ + P + L+ + D + +LV ++L+T K
Sbjct: 420 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE--QLVQRMLDTGLK 464
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 4/195 (2%)
Query: 224 DALGILNQ----MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
DA+ +L + M GI PD+ Y+ ++ ++ A+++ E+ G + TY
Sbjct: 96 DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTY 155
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
NV I GLC+ VE ME+ G PD TY L+ LCK R N + L+ EM
Sbjct: 156 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 215
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ N+ Y+ +IDG +G+ EA +++E + G+ +D + GLC+ G + +
Sbjct: 216 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 275
Query: 400 ALELLKQMADKDVSP 414
A LLKQM P
Sbjct: 276 ASLLLKQMVRDSHRP 290
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 121/238 (50%), Gaps = 2/238 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y +I + DA +L++M++ GI P++ Y+++++G+ + KA +L +E
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ GL P+ + Y I+G C++ NV ++ M ++ PD+ YN+L+ L KV
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + +M+ +G++ N TYS +I G GD+ A L++ L+ GL ++ +
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ + + K K M D+ V R++ +L+ ++S + +F R++ +I
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIY-GILIHNLSSSGNMEAAF-RVLSEI 528
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 177/366 (48%), Gaps = 22/366 (6%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI- 118
+P LL + + + +P +Y+ +++ L + ++ + ++ + R TP+ +
Sbjct: 25 RPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVT 84
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+ L+ Y A + ++S L ++ I+ G D + +++S
Sbjct: 85 YSTLLSGYCKAGKVEESRELLKEV------------------ISRGLRPDALMYTKVVAS 126
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C + E L ++EM + G C ++ + +I +++ + A +L +M + G+K
Sbjct: 127 LC--KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
D+V Y +++G+ +AE+L + + G PDV Y+ ++ GLCK V ++
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQV 244
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLA 357
+ M + P+V+TYNT+L LCK +++ E++++M G LN+ YS ++DGL
Sbjct: 245 LEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G EA ++E G + + GLC+ G + +A+E +++MA + P A
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364
Query: 418 VWEALL 423
+ +L+
Sbjct: 365 TYCSLV 370
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 4/230 (1%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK--PDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y ++ L K E+ +A ++ M S G + PD+V Y+ +L+G ++ EL
Sbjct: 45 VVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESREL 104
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E++ GL PD Y + LCK + ++++ M G P +IT+NTL+ C+
Sbjct: 105 LKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCR 164
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ L L+++M G+ ++ TY+ ++DGL G + EA LLE G
Sbjct: 165 EKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVA 224
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ + GLC+ G V A ++L+QM D P + +L L K+D
Sbjct: 225 YSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKID 274
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 8/203 (3%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFC-FGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
IL +C+ + D L +++M C +V Y+ V+ L K + +A ++ M
Sbjct: 263 ILDGLCKSGKI--DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G +PD+V Y+ ++NG+ +A E E+ + G P+ TY ++GLC +
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380
Query: 294 AGIKMIACMEELGSK-----PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+M+ M G P V TYN L+ LCK ++ + + M+ +G + +
Sbjct: 381 EAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440
Query: 349 YSIMIDGLASKGDIIEACGLLEE 371
YS +++GLA G ++A +L E
Sbjct: 441 YSTIVEGLARSGRALQAEMILSE 463
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
LL C P AY + L ++ + D VL+ + R++ P + + ++
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM--RDSHHDPNVVTYNTILDG 266
Query: 126 YADAHRFQDSVNLFYKIPK---FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
+ + ++ + ++ +N VG++ + DG C G+T
Sbjct: 267 LCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV------DGLCKLGRT----------- 309
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
E ++ M + G +V Y++++ L K K+ +A+ + +M +G KP+ V
Sbjct: 310 -----QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLV-----PDVYTYNVYINGLCKQNNVEAGIK 297
Y +++G+ +AE + +E+ G P V TYN I GLCK ++ +K
Sbjct: 365 TYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALK 424
Query: 298 MIACMEELGSKPDVITYNTLLQALCK 323
M G PD ++Y+T+++ L +
Sbjct: 425 FFQRMRSQGCDPDGVSYSTIVEGLAR 450
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M G P+ V + ++NG Q E L + + + P+V +YN + GLCK
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 292 VEAGIKMIACMEELG--SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+++ M G S PD++TY+TLL CK ++ REL+KE+ +G+ + Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ ++ L + EA LLEE + G C F+ I G C+ + A LL++MA
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 410 KDVSPGARVWEALL 423
V + L+
Sbjct: 181 SGVKADVVTYNTLM 194
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 161/365 (44%), Gaps = 29/365 (7%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVN-LFYKIPKFRI-----------------NRV 150
R+ + + L++ DA R ++V+ LF+++P+ R
Sbjct: 131 RQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRS 190
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQ---RDLSSDELLGFVQEMKKLGFCFGMV 207
+A++IL + G G C++++ S ++ E EM + G +V
Sbjct: 191 QWALDILRMAVKQG---GGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVV 247
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +VI +L K V A GIL QM +G++PD V Y +++G + +A +F E+
Sbjct: 248 TYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEM 307
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G++P+ T + ++ LCK +E + M G K ++I+Y+TLL L
Sbjct: 308 TSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCL 367
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L M GIV N ++I+++G A G + EA + E+ +GL +
Sbjct: 368 VDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAV 427
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN- 446
I C+ G + A++ M DK V P V++ L+ + D V LV +I N
Sbjct: 428 IHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAE--ELVYEIRNK 485
Query: 447 --TPC 449
PC
Sbjct: 486 GLGPC 490
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 145/336 (43%), Gaps = 38/336 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR--DLSSDELLGFVQEM------ 197
R R+ A C++ G D S +L +C+ + D + D L + E+
Sbjct: 115 RARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDA 174
Query: 198 ---------------------------KKLGFC-FGMVDYTNVIRSLVKKEKVFDALGIL 229
K+ G C +V Y+ V+ L K+ KV +A +
Sbjct: 175 ISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLF 234
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
++M G+ P++V Y V++ + KA+ + +++ G+ PD TYN I+G
Sbjct: 235 HEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTL 294
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ ++M M G P+ +T +T + LCK + RE M KG LN+ +Y
Sbjct: 295 GQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISY 354
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
S ++ G A+ G +++ L + G+ +F+ + G + G+VR+A+ + + M
Sbjct: 355 STLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQK 414
Query: 410 KDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ ++P + A++ + +D F ++D+
Sbjct: 415 RGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK 450
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 145/324 (44%), Gaps = 25/324 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
+Y ++ A D+S++ + + R+ + +F L+ YA ++++ +F
Sbjct: 353 SYSTLLHGYATAGCLVDMSNLFN-LMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFED 411
Query: 142 IPKFRIN--------------RVGF---AIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ K +N R+G A++ N MI+ G + ++ C D
Sbjct: 412 MQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGD 471
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L E L + K LG C ++ + ++I L K+ +VF+A I + + G K D+ +
Sbjct: 472 LVKAEELVYEIRNKGLGPC--ILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIF 529
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
T +++G + +A + D ++ +G+ PD+ TY +NG CK ++ G+ + +
Sbjct: 530 TSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLH 589
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G KP TY +L L +E+ +EM GI + + TYSI++ GL E
Sbjct: 590 KGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEE 649
Query: 365 ACGLLEEALNKGLCTQSSMFDETI 388
A + ++ LC + FD I
Sbjct: 650 AITVFQK-----LCAMNVKFDIVI 668
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 130/302 (43%), Gaps = 20/302 (6%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
L+ YA A D NLF N M+ DG + +++++ +
Sbjct: 357 LLHGYATAGCLVDMSNLF------------------NLMVRDGIVPNQHVFNILVNGYAK 398
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+ E + ++M+K G ++ Y VI + + + DA+ N M G++P+
Sbjct: 399 CGMVR--EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNF 456
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y ++ G D VKAEEL E+ GL P + ++ IN LCK+ V ++
Sbjct: 457 AVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDM 516
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
+ G K DV + +L+ C + +++ + M GI ++ TY +++G G
Sbjct: 517 IIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGR 576
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
I + L E L+KG+ + + + GL G A E+ ++M + ++ +
Sbjct: 577 IDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSI 636
Query: 422 LL 423
LL
Sbjct: 637 LL 638
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 17/247 (6%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
+ I +I DG+C+ GK +S D M +G +V Y ++
Sbjct: 526 VNIFTSLI-DGYCLIGK-----MSEAFRVHD-----------AMVSVGIEPDIVTYGTLV 568
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
K ++ D L + ++ G+KP Y ++L+G+ A+E+F E++ G+
Sbjct: 569 NGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIA 628
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
+ TY++ + GLC+ N E I + + + K D++ N ++ + K R L
Sbjct: 629 VTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGL 688
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ G+V +QTY+IM++ L +G + EA G+ L GL S + + L +
Sbjct: 689 FASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLE 748
Query: 394 RGLVRKA 400
+G + KA
Sbjct: 749 KGEIVKA 755
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM G V + + L K ++ +A + M + G K +I+ Y+ +L+G
Sbjct: 305 KEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATA 364
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
V LF+ ++ G+VP+ + +N+ +NG K V + + M++ G PDV+TY
Sbjct: 365 GCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTY 424
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
++ A C++ ++ + M KG+ N Y +I G + GD+++A L+ E N
Sbjct: 425 LAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRN 484
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKA 400
KGL F I LC+ G V +A
Sbjct: 485 KGLGPCILSFASLINHLCKEGRVFEA 510
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 42/191 (21%)
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIAC------------------------------- 301
+P VYTY++ I+ C+ ++ C
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159
Query: 302 -----MEELGSKPDVITYNTLLQALCKVRE----LNRLRELVKEMKWKGIVLNLQTYSIM 352
M ELG PD I+Y+T+L+++C L+ LR VK+ G N+ YS +
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQ--GGGCPCNVVVYSTV 217
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ GL +G + EAC L E +G+ ++ I LC+ V KA +L+QM V
Sbjct: 218 VHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGV 277
Query: 413 SPGARVWEALL 423
P + L+
Sbjct: 278 QPDNVTYNTLI 288
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
QEM + G + Y+ ++ L + +A+ + ++ + +K DIV ++++ +
Sbjct: 620 QEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKA 679
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+AE LF + GLVP V TY + + L K+ +VE + + M + G P
Sbjct: 680 RRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFI 739
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
N +++ L + E+ + + + K I+ T S+++ + KG E LL
Sbjct: 740 NVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLL 794
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 143/261 (54%), Gaps = 4/261 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S+++ S+C+ +L D+ L EM+ G +V Y+++I L + D +L +M
Sbjct: 248 SIVIDSLCKDGNL--DDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREM 305
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I P++V ++ +++ + + ++A+EL++E++ G+ PD TY+ I+G CK+N +
Sbjct: 306 IGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRL 365
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+M+ M G +P+++TY+ L+ + CK + ++ L E+ KG+V + TY+ +
Sbjct: 366 GEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTL 425
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ G G + A L +E +++G+ + + GLC G ++KALE+ ++M +
Sbjct: 426 VQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM 485
Query: 413 SPGARVWEALL--LSSVSKLD 431
G ++ ++ + + SK+D
Sbjct: 486 ILGIGIYNIIIHGMCNASKVD 506
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + N M G D S I+ +C D D+ ++EM +V ++ +
Sbjct: 263 ALSLFNEMEMKGIKADVVAYSSIIGGLCN--DGRWDDGAKMLREMIGRNIIPNVVTFSAL 320
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I VK+ K+ +A + N+M + GI PD + Y+ +++G + +A ++ D ++ G
Sbjct: 321 IDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGC 380
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ TY++ IN CK V+ G+++ + G D +TYNTL+Q C+ +LN +E
Sbjct: 381 EPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKE 440
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +EM +G+ ++ TY I++DGL G++ +A + E+ + +++ I G+C
Sbjct: 441 LFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMC 500
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
V A L ++ K V P + ++
Sbjct: 501 NASKVDDAWSLFCSLSVKGVKPDVLTYNVMI 531
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 153/334 (45%), Gaps = 27/334 (8%)
Query: 111 NFETPEFIFIDLIKTYADAHRFQDSVNLFYKIP--KFRINRVGFAIEILNCMINDGFCVD 168
FE F LI + R ++V L ++ K+R N V +N +IN G C+
Sbjct: 134 GFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVV-----TVNTLIN-GLCLK 187
Query: 169 GK-TCSLIL-----SSVCEQRDLSSDELLG-------------FVQEMKKLGFCFGMVDY 209
G+ T +L+L CE +++ +L ++M++ +V Y
Sbjct: 188 GRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQY 247
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ VI SL K + DAL + N+M+ GIK D+V Y+ ++ G+ + ++ E++
Sbjct: 248 SIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIG 307
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
++P+V T++ I+ K+ + ++ M G PD ITY++L+ CK L
Sbjct: 308 RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGE 367
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+++ M KG N+ TYSI+I+ + L E +KGL + ++ +
Sbjct: 368 ANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQ 427
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G CQ G + A EL ++M + V P + LL
Sbjct: 428 GFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILL 461
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 123/251 (49%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S + S+V +++ D +LGF +EM G M +I +K K+ A ++ +
Sbjct: 73 SKLFSAVARRKEY--DLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRA 130
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G +P+ + ++ ++NG ++ +A L D ++ + P+V T N INGLC + V
Sbjct: 131 LKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRV 190
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ +I M + G + + ITY +L +CK +L ++M+ + I ++ YSI+
Sbjct: 191 TEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIV 250
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
ID L G++ +A L E KG+ + I GLC G ++L++M +++
Sbjct: 251 IDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNI 310
Query: 413 SPGARVWEALL 423
P + AL+
Sbjct: 311 IPNVVTFSALI 321
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 25/343 (7%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y VI +L ++ D S+ + +E + + + +I + R+ D + ++
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMK-GIKADVVAYSSIIGGLCNDGRWDDGAKMLREM 305
Query: 143 PKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
I N V F+ I D F +GK L + EL EM
Sbjct: 306 IGRNIIPNVVTFSALI------DVFVKEGKL-------------LEAKELY---NEMVAR 343
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G + Y+++I K+ ++ +A +L+ M S G +P+IV Y++++N +
Sbjct: 344 GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNG 403
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
LF E+ GLV D TYN + G C+ + ++ M G P V+TY LL
Sbjct: 404 MRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDG 463
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LC EL + E+ ++M+ ++L + Y+I+I G+ + + +A L KG+
Sbjct: 464 LCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPD 523
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GLC++G + +A L ++M + +P + L+
Sbjct: 524 VLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+G A ++L+ M++ G + T S++++S C+ + + D + E+ G V
Sbjct: 363 NRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRV--DNGMRLFCEISSKGLVADTV 420
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +++ + K+ A + +M S G+ P +V Y ++L+G+ + KA E+F+++
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
++ + YN+ I+G+C + V+ + + G KPDV+TYN ++ LCK L
Sbjct: 481 QKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSL 540
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L ++MK G + TY+I+I +I + L+EE +G +S
Sbjct: 541 SEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMV 600
Query: 388 ICGLCQRGLVRKALELL 404
+ L L + L++L
Sbjct: 601 VVMLSDGRLDKTFLDML 617
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ FA ++ + GF + T S +++ C + +S E + V M ++ +
Sbjct: 116 RKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVS--EAVALVDRMVEMKYRPN 173
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +I L K +V +AL ++++M G + + + Y VLN + + A +LF
Sbjct: 174 VVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFR 233
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + V Y++ I+ LCK N++ + + ME G K DV+ Y++++ LC
Sbjct: 234 KMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDG 293
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++++EM + I+ N+ T+S +ID +G ++EA L E + +G+ + +
Sbjct: 294 RWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYS 353
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I G C+ + +A ++L M K P + L+ S
Sbjct: 354 SLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y +R+ + KV +A+ + M P ++ ++ + + V +++Y E
Sbjct: 35 VSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKE 94
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC---K 323
+ + G+ ++YT N+ IN C++ + ++ + G +P+ IT++TL+ C +
Sbjct: 95 MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGR 154
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
V E L + + EMK++ N+ T + +I+GL KG + EA L++ + G
Sbjct: 155 VSEAVALVDRMVEMKYRP---NVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEIT 211
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + +C+ G AL+L ++M ++ + V ++++ S+ K
Sbjct: 212 YGPVLNRMCKSGNTALALDLFRKMEERSIKASV-VQYSIVIDSLCK 256
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 144/279 (51%), Gaps = 22/279 (7%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F++N+V + I DG C G+T + + Q + D LL VQ
Sbjct: 80 FQLNQVSYGTLI------DGLCKAGETRAAM------QVLRNIDGLL--VQP-------- 117
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y+ +I SL K + V DA + +QM I PD++ Y ++ G ++ +A LF
Sbjct: 118 NVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLF 177
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++L+ + PD+YT+N+ ++GLCK+ ++ ++A M + PDVITYN+L+ V
Sbjct: 178 NQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLV 237
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ N+ + M +G+ ++ +YS+MI+GL + EA LL+E +K + + +
Sbjct: 238 KQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTY 297
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GL + G + A +L+ +M ++ + +LL
Sbjct: 298 SSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLL 336
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 49/247 (19%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ L K+ ++ A +L M + PD++ Y +++G + + KA +F+ + G
Sbjct: 195 LVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRG 254
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIK---------------------------------- 297
+ PDV++Y+V INGLCK V+ +
Sbjct: 255 VTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAW 314
Query: 298 -MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M G DVITYN+LL ALCK ++++ L+ ++K +GI ++ TY+I++DGL
Sbjct: 315 DLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGL 374
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G + +A + + L KG S+FD KAL LL +M D +P
Sbjct: 375 CKNGRLKDAQEVYQILLIKGY-HLDSLFD-------------KALSLLSKMEDNGCTPNP 420
Query: 417 RVWEALL 423
+E L+
Sbjct: 421 VTFEILI 427
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 114/235 (48%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E L F ++ GF V Y +I L K + A+ +L + ++P++V Y+ ++
Sbjct: 67 ETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTII 126
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+ + + A +L+ ++L+ + PDV TYN + G ++ + + M K
Sbjct: 127 YSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIK 186
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD+ T+N L+ LCK E+ + R ++ M + + ++ TY+ ++DG +A +
Sbjct: 187 PDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFV 246
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+G+ + I GLC+ +V +A+ LLK+M K ++P + +L+
Sbjct: 247 FNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLI 301
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 113/222 (50%), Gaps = 6/222 (2%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN-----GVIVQEDYVKAEE 262
++ + SLVK + + +QM+ GI+ D+V +++N G + D VK
Sbjct: 10 EFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETL 69
Query: 263 LF-DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
F D+++ G + +Y I+GLCK A ++++ ++ L +P+V+ Y+T++ +L
Sbjct: 70 HFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSL 129
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK + + +L +M K I ++ TY+ ++ G G + EA GL + L K +
Sbjct: 130 CKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDI 189
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F+ + GLC+ G ++KA +L M + V P + +L+
Sbjct: 190 YTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLM 231
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + + A + N M G D + S++++ +C+ + + DE + ++EM
Sbjct: 235 FLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMV--DEAVNLLKEMHSKSMAP 292
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y+++I L K ++FDA ++N+M + G D++ Y +L+ + KA L
Sbjct: 293 NTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLL 352
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNV---------------------EAGIKMIACME 303
++ G+ PD+YTY + ++GLCK + + + +++ ME
Sbjct: 353 TKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKME 412
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ G P+ +T+ L++AL + ++ EL++EM +G++
Sbjct: 413 DNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGLL 452
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 4/281 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ L ++ GF VD T + +L +C + +SD + ++ M +LG
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKR-TSDAMDIVLRRMTELGCIPD 162
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y N+++ L + + +AL +L+ M D G PD+V Y VLNG + D KA
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ E+L G++PDV TY+ I LCK ++ ++++ M + G PD +TYN++L C
Sbjct: 223 TYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 282
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ +K+M+ G+ N+ TYS +++ L G EA + + +GL +
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G +G + + LL M + P V+ L+
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 165/385 (42%), Gaps = 62/385 (16%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y ++ L +N + + + D + KR E + L++ YA
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATK------- 354
Query: 137 NLFYKIPKFRINRVGFAIE---ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
G +E +L+ M+ +G D ++++ + +Q + D+ +
Sbjct: 355 --------------GALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV--DQAMLV 398
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+M++ G +V Y VI L K V DA+ QM +G+ P+I+ YT +++G+
Sbjct: 399 FSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCT 458
Query: 254 QEDYVKAEEL-----------------------------------FDELLVLGLVPDVYT 278
+ + KAEEL FD ++ +G+ PD+ T
Sbjct: 459 CDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 518
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I+G C ++ K++A M +G KPD++TY TL+ C+V ++ L KEM
Sbjct: 519 YNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMV 578
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G+ N+ TY+I++ GL A L G + S ++ + GLC+ L
Sbjct: 579 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD 638
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+AL + + + D+ R + ++
Sbjct: 639 EALRMFQNLCLTDLQLETRTFNIMI 663
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 133/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+LN M+ +G D T + IL C E +G +++M+ G +V Y+++
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSG--QPKEAIGTLKKMRSDGVEPNVVTYSSL 312
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A I + M G++PDI Y +L G + V+ L D ++ G+
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD + +N+ I KQ V+ + + + M + G P+V+ Y T++ LCK ++
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++M +G+ N+ Y+ +I GL + +A L+ E L++G+C + F+ I C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V ++ +L M V P + L+
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 150/316 (47%), Gaps = 22/316 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFR----------INRV--GF--------AIEI 156
F + +L+K D +R Q+++ L + + R N V GF A
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
+ M++ G D T S I++++C+ + + D+ + + M K G + Y +++
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAM--DKAMEVLNTMVKNGVMPDCMTYNSILHGY 281
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
+ +A+G L +M+SDG++P++V Y+ ++N + +A ++FD + GL PD+
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
TY + G + + ++ M G +PD +N L+ A K ++++ + +
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M+ G+ N+ Y +ID L G + +A E+ +++GL ++ I GLC
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 397 VRKALELLKQMADKDV 412
KA EL+ +M D+ +
Sbjct: 462 WDKAEELILEMLDRGI 477
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 131/282 (46%), Gaps = 23/282 (8%)
Query: 149 RVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
R+G +I+ N +I DG C+ GK DE + M +G +
Sbjct: 509 RIGVKPDIITYNTLI-DGCCLAGKM----------------DEATKLLASMVSVGVKPDI 551
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y +I + ++ DAL + +M S G+ P+I+ Y ++L G+ A+EL+
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA--CMEELGSKPDVITYNTLLQALCKV 324
+ G ++ TYN+ ++GLCK N + ++M C+ +L + + T+N ++ AL K
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL--QLETRTFNIMIGALLKC 669
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ ++L G+V +++TYS+M + L +G + E L G S M
Sbjct: 670 GRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRML 729
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
+ + L QRG + +A L + +K S A LL SS
Sbjct: 730 NSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESS 771
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E++ M++ G C++ + I+ S C E R + S++L M ++G ++ Y
Sbjct: 465 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL---MVRIGVKPDIITYNT 521
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K+ +A +L M S G+KPDIV Y ++NG A LF E++ G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P++ TYN+ + GL A ++ + + G++ ++ TYN +L LCK +
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + + + L +T++IMI L G + EA L GL + L
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENL 701
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
++G + + +L M + S +R+ +++ + + D +++ ++D+
Sbjct: 702 IEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 39/191 (20%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE----- 326
+ P V+TY + I C+ ++ G + + + G + D IT+ LL+ LC +
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 327 ---LNRLREL-------------------------------VKEMKWKGIVLNLQTYSIM 352
L R+ EL + + + G ++ +Y+ +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
++G +GD +A E L++G+ + I LC+ + KA+E+L M V
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 413 SPGARVWEALL 423
P + ++L
Sbjct: 268 MPDCMTYNSIL 278
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 5/278 (1%)
Query: 149 RVGF---AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R GF E N M+ +G C + T ++ +C E G V EM + G
Sbjct: 197 RNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFL--EGFGLVDEMIRRGLDVS 254
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I L K + +A + ++M + G +P+IV T ++ G ++ + A ELFD
Sbjct: 255 VYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFD 314
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G DV+TYNV+I+G CK V +++ M G P+++TYN+L+ LCK
Sbjct: 315 AIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAG 374
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E++ E+VK M G+ ++ T I++DGL + +A L + + GL +
Sbjct: 375 EVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYT 434
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A+ LL+ M K++ P + L+
Sbjct: 435 ILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLI 472
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 167/357 (46%), Gaps = 26/357 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y +I+ L +F + ++D + +R + ++F LI ++
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRR-GLDVSVYVFTVLIDGLCKNGMLVEARE 276
Query: 138 LFYKIPKFRINRVGFAIEILNCM-INDGFCVDGKT--CSLILSSVCE---QRDLSSDELL 191
+F ++ +NR G+ I+ C + G+C+ G + ++ E +RD+ + +
Sbjct: 277 MFDEM----VNR-GYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVF 331
Query: 192 --GFVQ------------EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
G+ + EM + G +V Y ++I L K +V A I+ M G+
Sbjct: 332 IHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGL 391
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PDIV ++L+G+ + +A LF++L+ GL PDV++Y + I+G C + +
Sbjct: 392 TPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMN 451
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M P ++TY+ L+ LC+ ++ L+ EM KG + + TYSI++D L
Sbjct: 452 LLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALW 511
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
K + EA L + + +GL + I G C+ + +A+ L ++M K++ P
Sbjct: 512 KKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVP 568
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 128/287 (44%), Gaps = 10/287 (3%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + V F+ I ++ G+ +D + +L +C + + L F E+ GF
Sbjct: 83 FHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVL--KALEFHDEIVNNGFSL 140
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQM------KSDG--IKPDIVCYTMVLNGVIVQED 256
V Y +I L + +V +A+ +L + + DG +K ++V Y++V++ +
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ E ++E++ G+ P+ +TY I GLC G ++ M G V +
Sbjct: 201 VDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 260
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK L RE+ EM +G N+ T + ++ G KG++ A L + G
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G C+ G VR A+ + +M + V P + +L+
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLI 367
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 19/256 (7%)
Query: 122 LIKTYADAHRFQDSVNLFYK------IPKF-----------RINRVGFAIEILNCMINDG 164
I Y R +D+V +F + +P + V A EI+ M G
Sbjct: 331 FIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D TC ++L +C+ + L D+ + ++ + G + YT +I ++ +
Sbjct: 391 LTPDIVTCCILLDGLCKSKRL--DQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGE 448
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A+ +L M + P IV Y+ +++G+ A L +E+ V G +PD TY++ ++
Sbjct: 449 AMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLD 508
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
L K+ +++ + + M + G +PDV+ Y ++ CK ++ L +EM K +V
Sbjct: 509 ALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVP 568
Query: 345 NLQTYSIMIDGLASKG 360
++ TY+I+ + + G
Sbjct: 569 DIVTYTILFNAVFKSG 584
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 5/180 (2%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+G A+ +L M T S ++ +C +S+ L + EM G +
Sbjct: 445 RMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRL--LNEMHVKGPLPDTIT 502
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ ++ +L KK+ + +A+ + NQM G++PD++CYT++++G E +A LF E+
Sbjct: 503 YSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMH 562
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ LVPD+ TY + N + K + K + + ++ P V+ Y L ALCK L+
Sbjct: 563 MKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCKSEHLD 619
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 158/318 (49%), Gaps = 15/318 (4%)
Query: 132 FQDSVNLFYKIPKFR--------INRVGFA---IEILNCMINDGFCVDGKTCSLILSSVC 180
FQ+ NL + IP R + + GFA E+ M G +D + + ++ C
Sbjct: 572 FQEIKNLGF-IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ ++ L ++EMK G +V Y +VI L K +++ +A + + KS GI+ +
Sbjct: 631 KSGKVNKAYQL--LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+V Y+ +++G +A + +EL+ GL P+VYT+N ++ L K + +
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M++L P+ ITY+ L+ LCK+R+ N+ +EM+ +G N+ TY+ MI GLA G
Sbjct: 749 SMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+I+EA L E+ KG S++++ I GL A L ++ K S +
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTC- 867
Query: 421 ALLLSSVSKLDFVNTSFI 438
+LL S+ K + + + I
Sbjct: 868 VVLLDSLHKAECIEQAAI 885
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 7/270 (2%)
Query: 159 CMINDGFCVDGKTCSLILSSVCE-----QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
C I +G +D KTC + C R DE ++M V YT++I
Sbjct: 464 CSIFEG--LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R+ K + D I N+M G PD++ ++ V + K LF E+ LG +
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PD +Y + I+GL K ++ M+E G D YNT++ CK ++N+ +L
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
++EMK KG + TY +IDGLA + EA L EEA +KG+ ++ I G +
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
G + +A +++++ K ++P W LL
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM +LG ++ + + K ++ + ++K+ G PD YT++++G++
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA 597
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A ELF + G V D YN I+G CK V +++ M+ G +P V+TY
Sbjct: 598 GFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+++ L K+ L+ L +E K KGI LN+ YS +IDG G I EA ++EE +
Sbjct: 658 GSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 717
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
KGL ++ + L + + +AL + M D +P + ++L+ + K+ N
Sbjct: 718 KGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITY-SILIHGLCKIRKFN 776
Query: 435 TSFI 438
+F+
Sbjct: 777 KAFV 780
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 164/369 (44%), Gaps = 25/369 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETP-EFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I L + + + + +H++ +N + P + + +I Y A +F+D+ +L +
Sbjct: 308 YTSMIGVLCKADRLNEAVELFEHMD--QNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER 365
Query: 142 ------IPKF-----------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
IP R +V A++ M D + T ++++ +C+
Sbjct: 366 QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGK 424
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L + L MK G ++ ++ L K +++ DA I + +PD V Y
Sbjct: 425 LET--ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTY 482
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ G+ +A +L++++L +P+ Y I K E G K+ M
Sbjct: 483 CSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLR 542
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
LG PD++ NT + + K E+ + R L +E+K G + + ++Y+I+I GL G E
Sbjct: 543 LGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHE 602
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL- 423
A L +G + ++ I G C+ G V KA +LL++M K P + +++
Sbjct: 603 AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVID 662
Query: 424 -LSSVSKLD 431
L+ + +LD
Sbjct: 663 GLAKIDRLD 671
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 122/280 (43%), Gaps = 7/280 (2%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
+IL M GF TC I+ S + R L E F+Q M+KL F YTN+I
Sbjct: 151 QILEEMSIAGFGPSNNTCIEIVLSFIKSRKLR--EAFTFIQTMRKLKFRPAFSAYTNLIG 208
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-ELFDELLVLGLV 273
+L L + QM+ G ++ +T ++ V +E V A L DE+ L
Sbjct: 209 ALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIR-VFAREGRVDAALSLLDEMKSNSLE 267
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PDV YNV I+ K V+ K M+ G D +TY +++ LCK LN EL
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVEL 327
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ M V Y+ MI G G +A LLE KG ++ + L +
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEAL--LLSSVSKLD 431
+G V +AL+ ++M KD P + + +L KL+
Sbjct: 388 KGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLE 426
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S+++ +C+ R ++ F QEM+K GF + YT +I L K + +A +
Sbjct: 761 TYSILIHGLCKIRKF--NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ K G D Y ++ G+ A LF+E + G T V ++ L K
Sbjct: 819 KFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAE 878
Query: 291 NVEAGIKMIACMEE 304
+E + A + E
Sbjct: 879 CIEQAAIVGAVLRE 892
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 179/375 (47%), Gaps = 24/375 (6%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI- 118
+P LL + + +P +Y+ +++ L + ++ + ++ + R TP+ +
Sbjct: 25 RPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVT 84
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+ L+ Y A + ++S L ++ I+ G D + +++S
Sbjct: 85 YSTLLSGYCKAGKVEESRELLKEV------------------ISRGLRPDALMYTKVMAS 126
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C + E L ++EM + G C ++ + +I +++ + A +L M + G+K
Sbjct: 127 LC--KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
D+V Y +++G+ +AE+L + + G PDV Y+ ++ GLCK V ++
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQV 244
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLA 357
+ M + P+V+TYNT+L LCK +++ E++++M G LN+ YS ++DGL
Sbjct: 245 LEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G EA ++E G + + GLC+ G + +A+E +++MA + P A
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364
Query: 418 VWEALL--LSSVSKL 430
+ +L+ L S +L
Sbjct: 365 TYCSLVHGLCSCGRL 379
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 4/243 (1%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK--PDIVCYTMVLNG 250
++ M G +V Y ++ L K E+ +A ++ M S G + PD+V Y+ +L+G
Sbjct: 32 LLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSG 91
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
++ EL E++ GL PD Y + LCK + ++++ M G P
Sbjct: 92 YCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPT 151
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+IT+NTL+ C+ + L L++ M G+ ++ TY+ ++DGL G + EA LLE
Sbjct: 152 LITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLE 211
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVS 428
G + + GLC+ G V A ++L+QM D D P + +L L
Sbjct: 212 RMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSG 271
Query: 429 KLD 431
K+D
Sbjct: 272 KID 274
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFC-FGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
IL +C+ + D L +++M C +V Y+ V+ L K + +A ++ M
Sbjct: 263 ILDGLCKSGKI--DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G +PD+V Y+ ++NG+ +A E E+ + G P+ TY ++GLC +
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380
Query: 294 AGIKMIACMEELGSK-----PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+M+ M G P V TYN L+ LCK ++ + + M+ +G + +
Sbjct: 381 EAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440
Query: 349 YSIMIDGLASKGDIIEA 365
YS +++GLA G ++A
Sbjct: 441 YSTIVEGLARSGRALQA 457
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 115/266 (43%), Gaps = 33/266 (12%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
LL C P AY + L ++ + + VL+ + R++ P + + ++
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM--RDSDHDPNVVTYNTILDG 266
Query: 126 YADAHRFQDSVNLFYKIPK---FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
+ + ++ + ++ +N VG++ + DG C G+T
Sbjct: 267 LCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV------DGLCKLGRT----------- 309
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
E ++ M + G +V Y++++ L K K+ +A+ + +M +G KP+ V
Sbjct: 310 -----QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLV-----PDVYTYNVYINGLCKQNNVEAGIK 297
Y +++G+ +AE + +E+ G P V TYN I GLCK ++ +K
Sbjct: 365 TYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALK 424
Query: 298 MIACMEELGSKPDVITYNTLLQALCK 323
M G PD ++Y+T+++ L +
Sbjct: 425 FFQRMRSQGCDPDGVSYSTIVEGLAR 450
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M G P+ V + ++NG Q E L + + G+ P+V +YN + GLCK
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 292 VEAGIKMIACMEELG--SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+++ M G S PD++TY+TLL CK ++ REL+KE+ +G+ + Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ ++ L + EA LLEE + G C F+ I G C+ + A LL+ MA
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 410 KDVSPGARVWEALL 423
V + L+
Sbjct: 181 SGVKADVVTYNTLM 194
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 172/350 (49%), Gaps = 23/350 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
N EP ++ ++K L + D +VL + K + F F F L Y+
Sbjct: 652 NIEPSLITFNTLLKGLFKAGMVEDAENVLTEM-KDQGFVPDAFTFSILFDGYSSN----- 705
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGF 193
++ A+ + ++ G ++ TCS++L+++C++ + ++E+LG
Sbjct: 706 -------------DKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILG- 751
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+EM K G V Y +I +K + A ++ M+ G+KPD + Y ++
Sbjct: 752 -REMAK-GLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCE 809
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D AE+ +++ + G+ P V TYN+ I G ++ + ++ ME+ G+ P+V++
Sbjct: 810 LGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVS 869
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y TL+ LCK +L + + ++M+ +G+ N++ Y+++IDG SKG I +A EE
Sbjct: 870 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMF 929
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KG+ ++ I GL G + +A ++L +++ K + P + +L+
Sbjct: 930 KKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 115/227 (50%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y I++ VK V L + N+MK D I P + Y ++++G+ AE+LFDE+L
Sbjct: 555 YGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEML 614
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L+P + TYN I+G CK N E K+ M+ +P +IT+NTLL+ L K +
Sbjct: 615 ARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVE 674
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ EMK +G V + T+SI+ DG +S A G+ E A++ GL + +
Sbjct: 675 DAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILL 734
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
LC+ G + KA E+L + K + P ++ ++ K D V
Sbjct: 735 NALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGA 781
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 154/333 (46%), Gaps = 9/333 (2%)
Query: 102 VLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI--PKFRINRVGFAIEILNC 159
+LDH+ K + F +F++++++ F+ S ++ K +++ VG +E+ N
Sbjct: 523 LLDHLVKTKQFRVTINVFLNILES-----DFRPSKFMYGKAIQAAVKLSDVGKGLELFNR 577
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M +D ++++ +C+ R + E L EM ++ Y +I K
Sbjct: 578 MKHDRISPTVFIYNVLIDGLCKVRQMKDAEQL--FDEMLARRLLPSLITYNTLIDGYCKD 635
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ + +MK+D I+P ++ + +L G+ AE + E+ G VPD +T+
Sbjct: 636 GNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTF 695
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
++ +G + +A + + + G K + T + LL ALCK ++ + E++
Sbjct: 696 SILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMA 755
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG+V N Y+ MIDG + KGD++ A ++ +G+ ++ I C+ G +
Sbjct: 756 KGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMEN 815
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
A + + +M K VSP + L+ K +F
Sbjct: 816 AEQEVNKMKLKGVSPSVETYNILIGGYGRKYEF 848
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 23/332 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG------K 170
FI+ LI + +D+ LF + R+ ++ N +I DG+C DG K
Sbjct: 588 FIYNVLIDGLCKVRQMKDAEQLF---DEMLARRLLPSLITYNTLI-DGYCKDGNPEKSFK 643
Query: 171 TCSLILSSVCEQRDLSSDELL------GFVQ-------EMKKLGFCFGMVDYTNVIRSLV 217
+ + E ++ + LL G V+ EMK GF ++ +
Sbjct: 644 VRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYS 703
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
+K ALG+ G+K + +++LN + + KAEE+ + GLVP+
Sbjct: 704 SNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEV 763
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
YN I+G ++ ++ I ME+ G KPD + YN L++ C++ ++ + V +M
Sbjct: 764 LYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKM 823
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
K KG+ +++TY+I+I G K + + LL+E + G + I LC+ +
Sbjct: 824 KLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKL 883
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+A + + M D+ VSP R++ L+ SK
Sbjct: 884 LEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSK 915
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 159/379 (41%), Gaps = 37/379 (9%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
++ QI K IL + + P Y+ +I + +D +EK +
Sbjct: 739 KEGQIEKAEEILGREMAKGLV----PNEVLYNTMIDGYSRKGDLVGARMKIDAMEK-QGM 793
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
+ + LI+T+ + D N ++ K ++ V ++E N +I G+
Sbjct: 794 KPDHLAYNCLIRTFCE---LGDMENAEQEVNKMKLKGVSPSVETYNILIG-GY------- 842
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
R D+ ++EM+ G +V Y +I L K K+ +A + M
Sbjct: 843 ---------GRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 893
Query: 233 KSDGIKPDIVCYTMVLNGVI----VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+ G+ P++ Y M+++G +++ + +EE+F + + L LV TYN I+GL
Sbjct: 894 EDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLV----TYNTLIDGLSM 949
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ M+ + G KPDV TYN+L+ + R L +EMK GI L+T
Sbjct: 950 NGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKT 1009
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y ++I +G + E +L L +++ + G + KA L KQM
Sbjct: 1010 YHLLISLCTKEGIELTKKIFGEMSLQPDLL----VYNGVLHCYAVHGDMDKAFNLQKQMI 1065
Query: 409 DKDVSPGARVWEALLLSSV 427
+K + + +L+L +
Sbjct: 1066 EKSIGLDKTTYNSLILGQL 1084
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 4/228 (1%)
Query: 208 DYTNVIRSLVKKEK--VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
D++ ++ S++ E + +A + ++++GI P T++L+ ++ + + +F
Sbjct: 482 DFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFL 541
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L P + Y I K ++V G+++ M+ P V YN L+ LCKVR
Sbjct: 542 NILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVR 601
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L EM + ++ +L TY+ +IDG G+ ++ + E + F+
Sbjct: 602 QMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFN 661
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ GL + G+V A +L +M D+ P A + L SS K D
Sbjct: 662 TLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKAD 709
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 120/307 (39%), Gaps = 57/307 (18%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
+ I N +I DG C GK ++ F +EM K G +V Y +I
Sbjct: 902 VRIYNMLI-DGCCSKGKI----------------EDAFRFSEEMFKKGIELNLVTYNTLI 944
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG-- 271
L K+ +A +L ++ G+KPD+ Y +++G + + L++E+ G
Sbjct: 945 DGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIK 1004
Query: 272 -----------------------------LVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
L PD+ YN ++ +++ + M
Sbjct: 1005 PTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQM 1064
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E D TYN+L+ KV +L +R L+ EMK + + TY I++ G D
Sbjct: 1065 IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDY 1124
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM---------ADKDVS 413
+ A E KGL + DE + GL + ++A ++ +M D+D+S
Sbjct: 1125 MGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKLGDVIVDEDLS 1184
Query: 414 PGARVWE 420
R +E
Sbjct: 1185 ATERSFE 1191
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 132/239 (55%), Gaps = 4/239 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ ++ ++C +R + + +G +++M+ G +V Y +IR L V A+ +L +M
Sbjct: 117 TTLMRALCAER--RTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREM 174
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
GI+P++V Y+ +L G + ++F+E+ G+ PDV Y I+ LC++ V
Sbjct: 175 CESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKV 234
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ +++ M E G +P+V+TYN L+ ++CK + L M KG+ L+ TY+ +
Sbjct: 235 KKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTL 294
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSM--FDETICGLCQRGLVRKALELLKQMAD 409
I GL+ ++ EA GLLEE ++ + ++ F+ I GLC+ G +R+A ++ MA+
Sbjct: 295 ITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAE 353
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 144/302 (47%), Gaps = 38/302 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM--KKLGFCFGMVDYT 210
A+ + N M+ G +D T + +++ + L DE +G ++EM + +V +
Sbjct: 272 AMSLRNNMLEKGVALDAVTYNTLITGLSGV--LEMDEAMGLLEEMIHGETMVEPNVVTFN 329
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+VI L K ++ A + + M +G ++V + +++ G++ KA EL DE+
Sbjct: 330 SVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASS 389
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP--------------------- 309
GL PD +TY++ ING CK V+ +++ M G +P
Sbjct: 390 GLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQA 449
Query: 310 -------------DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
DV+ Y+T++ C++R+ E +K M +G++ + TYS++I+
Sbjct: 450 RNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMF 509
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
A+ GD+ A +L++ G ++FD I G +G K LEL+++M KD++ +
Sbjct: 510 ANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDS 569
Query: 417 RV 418
++
Sbjct: 570 KI 571
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 119/227 (52%), Gaps = 2/227 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y V+ +L ++ DA L ++ + +P V YT ++ + + +A L +
Sbjct: 79 VSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRD 138
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ PDV TY I GLC +V+ ++++ M E G +P+V+ Y+ LLQ CK
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGR 198
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ ++ +EM +GI ++ Y+ +ID L +G + +A ++++ + +GL ++
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
I +C+ G V++A+ L M +K V+ A + L+ LS V ++D
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMD 305
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%)
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D V Y VL + Q + A ++ P +Y + LC + + ++
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M+ G +PDV+TY TL++ LC ++++ EL++EM GI N+ YS ++ G
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
G + EE +G+ M+ I LC+ G V+KA +++ +M ++ + P +
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256
Query: 420 EALLLS 425
L+ S
Sbjct: 257 NVLINS 262
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 124/253 (49%), Gaps = 6/253 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
R+++V A+E+++ M + G D T S++++ C+ + E L + +M++ G
Sbjct: 371 LRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESL--LSKMRRDGIEP 428
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y ++ +L ++ + A ++M + K D+V Y+ +++G D AEE
Sbjct: 429 ELVHYIPLLAALCEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFL 487
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+L GL+PD TY++ IN ++ A +++ M G PDV +++L++
Sbjct: 488 KHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAK 547
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD---IIEACGLLEEALNKGLCTQS 381
+ ++ EL++EM K I L+ + S + L + + ++++ + ++KG S
Sbjct: 548 GDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQSVPGFDTEVSKGAVISS 607
Query: 382 SMFDETICGLCQR 394
+ LC +
Sbjct: 608 HELTNMLHKLCNK 620
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 300 ACMEELGSKPDVITYNTLLQALCKV-----RELNRLRELVKEMKWKGIVLNLQTYSIMID 354
A + L S D ++YNT+L ALC+ L LR + E + + +Y+ ++
Sbjct: 67 ALLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAV-----SYTTLMR 121
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L ++ +A GLL + G+ + I GLC V KA+ELL++M + + P
Sbjct: 122 ALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEP 181
Query: 415 GARVWEALL 423
V+ LL
Sbjct: 182 NVVVYSCLL 190
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 158/318 (49%), Gaps = 15/318 (4%)
Query: 132 FQDSVNLFYKIPKFR--------INRVGFA---IEILNCMINDGFCVDGKTCSLILSSVC 180
FQ+ NL + IP R + + GFA E+ M G +D + + ++ C
Sbjct: 572 FQEIKNLGF-IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC 630
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ ++ L ++EMK G +V Y +VI L K +++ +A + + KS GI+ +
Sbjct: 631 KSGKVNKAYQL--LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+V Y+ +++G +A + +EL+ GL P+VYT+N ++ L K + +
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M++L P+ ITY+ L+ LCK+R+ N+ +EM+ +G N+ TY+ MI GLA G
Sbjct: 749 SMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+I+EA L E+ KG S++++ I GL A L ++ K S +
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTC- 867
Query: 421 ALLLSSVSKLDFVNTSFI 438
+LL S+ K + + + I
Sbjct: 868 VVLLDSLHKAECIEQAAI 885
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 7/270 (2%)
Query: 159 CMINDGFCVDGKTCSLILSSVCE-----QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
C I +G +D KTC + C R DE ++M V YT++I
Sbjct: 464 CSIFEG--LDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R+ K + D I N+M G PD++ ++ V + K LF E+ LG +
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PD +Y + I+GL K ++ M+E G D YNT++ CK ++N+ +L
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
++EMK KG + TY +IDGLA + EA L EEA +KG+ ++ I G +
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
G + +A +++++ K ++P W LL
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM +LG ++ + + K ++ + ++K+ G PD YT++++G++
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA 597
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A ELF + G V D YN I+G CK V +++ M+ G +P V+TY
Sbjct: 598 GFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+++ L K+ L+ L +E K KGI LN+ YS +IDG G I EA ++EE +
Sbjct: 658 GSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 717
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
KGL ++ + L + + +AL + M D +P + ++L+ + K+ N
Sbjct: 718 KGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITY-SILIHGLCKIRKFN 776
Query: 435 TSFI 438
+F+
Sbjct: 777 KAFV 780
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 164/369 (44%), Gaps = 25/369 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETP-EFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I L + + + + +H++ +N + P + + +I Y A +F+D+ +L +
Sbjct: 308 YTSMIGVLCKADRLNEAVELFEHMD--QNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER 365
Query: 142 ------IPKF-----------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
IP R +V A++ M D + T ++++ +C+
Sbjct: 366 QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGK 424
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L + L MK G ++ ++ L K +++ DA I + +PD V Y
Sbjct: 425 LET--ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTY 482
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ G+ +A +L++++L +P+ Y I K E G K+ M
Sbjct: 483 CSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLR 542
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
LG PD++ NT + + K E+ + R L +E+K G + + ++Y+I+I GL G E
Sbjct: 543 LGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHE 602
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL- 423
A L +G + ++ I G C+ G V KA +LL++M K P + +++
Sbjct: 603 AYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVID 662
Query: 424 -LSSVSKLD 431
L+ + +LD
Sbjct: 663 GLAKIDRLD 671
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 122/280 (43%), Gaps = 7/280 (2%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
+IL M GF TC I+ S + R L E F+Q M+KL F YTN+I
Sbjct: 151 QILEEMSIAGFGPSNNTCIEIVLSFIKSRKLR--EAFTFIQTMRKLKFRPAFSAYTNLIG 208
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-ELFDELLVLGLV 273
+L L + QM+ G ++ +T ++ V +E V A L DE+ L
Sbjct: 209 ALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIR-VFAREGRVDAALSLLDEMKSNSLE 267
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PDV YNV I+ K V+ K M+ G D +TY +++ LCK LN EL
Sbjct: 268 PDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVEL 327
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ M V Y+ MI G G +A LLE KG ++ + L +
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEAL--LLSSVSKLD 431
+G V +AL+ ++M KD P + + +L KL+
Sbjct: 388 KGQVDEALKKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLE 426
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S+++ +C+ R ++ F QEM+K GF + YT +I L K + +A +
Sbjct: 761 TYSILIHGLCKIRKF--NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ K G D Y ++ G+ A LF+E + G T V ++ L K
Sbjct: 819 KFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAE 878
Query: 291 NVEAGIKMIACMEE 304
+E + A + E
Sbjct: 879 CIEQAAIVGAVLRE 892
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C++ D+ + + K G +V +
Sbjct: 109 GFYKEILEC----GYPASLYFFNILMHRFCKEGDIRLAQ--SVFDAITKWGLRPSVVSFN 162
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + N M + G++PD+ Y++++NG+ + A ELFDE+L
Sbjct: 163 TLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK 222
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL LCK +L +
Sbjct: 223 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQA 282
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + ++ I G
Sbjct: 283 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISG 342
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P + ++
Sbjct: 343 LCQEGRSVDAEKMLREMLSVGLKPNXGTYTMII 375
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 108/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ + D A+ +FD + G
Sbjct: 94 VLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWG 153
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V ++N +NG + +++ G ++ M G +PDV TY+ L+ LCK +++
Sbjct: 154 LRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDAN 213
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N T++ +IDG G + A + ++ L++ L ++ GL
Sbjct: 214 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGL 273
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A +L+ +M+ K + P + L+
Sbjct: 274 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 305
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 2/226 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + N M G D T S++++ +C++ + D+ EM G
Sbjct: 170 RLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDKGLVPN 227
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y + G+ + D +A +L D
Sbjct: 228 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLID 287
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 288 EMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEG 347
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
++++EM G+ N TY+++I+ KGD+ LL+E
Sbjct: 348 RSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKE 393
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M++ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 212 ANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 269
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 270 TYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENI 329
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP+ TY ++ CK ++ +
Sbjct: 330 RLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSK 389
Query: 333 LVKEMK 338
L+KEM+
Sbjct: 390 LLKEMQ 395
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 3/295 (1%)
Query: 129 AHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD 188
AH S N F+ N + AI N M+ + +L+S+ + + S+
Sbjct: 22 AHFLSLSHNRFHS-KSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHST- 79
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
LL +M G + +I S +V A +L ++ G +PD +T ++
Sbjct: 80 -LLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLI 138
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G+ V+ +A LFD+++ G PDV TY INGLCK N A I+++ M + +
Sbjct: 139 RGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ 198
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+V YNT++ +LCK R++ L EM KGI ++ TY+ +I L + + L
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E ++ + F+ + LC+ G V +A +++ +M + V P + AL+
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 137/272 (50%), Gaps = 14/272 (5%)
Query: 153 AIEILNCMINDGFCVDGKTC-SLI--LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
A + + M+ G D T SLI L ++CE + +++ + EM +V +
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT-----LLNEMVDSKIMPDVVSF 274
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
V+ +L K+ KV +A ++++M G++P++V YT +++G + + +A ++FD ++
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIA--CMEELGSKPDVITYNTLLQALCKVREL 327
G +P+V +YN ING CK ++ + + C +EL PD +TY+TL+ LC V L
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL--IPDTVTYSTLIHGLCHVERL 392
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
L EM + NL TY I++D L + EA LL+ L + +
Sbjct: 393 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 452
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
I G+C+ G + A +L ++ K + P VW
Sbjct: 453 IDGMCRAGELEAARDLFSNLSSKGLQPD--VW 482
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 167/367 (45%), Gaps = 24/367 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI--DLIKTYADAHRFQD 134
+PPP F K L ++ S++L + ++F P I+ LI ++ +R
Sbjct: 56 QPPPSTVDFN-KLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGF 114
Query: 135 SVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+ ++ KI K + ++G A+ + + MI +GF D T +++
Sbjct: 115 AFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLIN 174
Query: 178 SVCEQRDLSSD-ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+C+ + S+ LLG + + F Y +I SL K +V +A + ++M + G
Sbjct: 175 GLCKVGNTSAAIRLLGSMVQKNCQPNVFA---YNTIIDSLCKDRQVTEAFNLFSEMVTKG 231
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I PDI Y +++ + ++ L +E++ ++PDV ++N ++ LCK+ V
Sbjct: 232 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAH 291
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G +P+V+TY L+ C + E++ ++ M KG + N+ +Y+ +I+G
Sbjct: 292 DVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGY 351
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
I +A L E + L + + I GLC ++ A+ L +M P
Sbjct: 352 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 411
Query: 417 RVWEALL 423
+ LL
Sbjct: 412 VTYRILL 418
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 159/358 (44%), Gaps = 25/358 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S NC+P AY+ +I +L ++ Q + ++ + + F + LI
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK-GISPDIFTYNSLIHAL 246
Query: 127 ADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ ++ L ++ +I + V F + D C +GK V E D
Sbjct: 247 CNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV------DALCKEGK--------VTEAHD 292
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ V +M + G +V YT ++ ++ +A+ + + M G P+++ Y
Sbjct: 293 V--------VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++NG + KA LF E+ L+PD TY+ I+GLC ++ I + M
Sbjct: 345 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 404
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
P+++TY LL LCK R L L+K ++ + ++Q +I IDG+ G++
Sbjct: 405 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 464
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A L +KGL + I GLC+RGL+ +A +L ++M + + ++ +
Sbjct: 465 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 522
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 121/254 (47%), Gaps = 2/254 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ + M+ G + + + +++ C+ + + D+ + EM + V Y+ +
Sbjct: 325 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRI--DKAMYLFGEMCRQELIPDTVTYSTL 382
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L E++ DA+ + ++M + P++V Y ++L+ + +A L + L
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ N+ I+G+C+ +EA + + + G +PDV TY+ ++ LC+ L+ +
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 502
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +EM G LN Y+ + G + A LL+E + +G +S + L
Sbjct: 503 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 562
Query: 393 QRGLVRKALELLKQ 406
GL + ++L++
Sbjct: 563 DDGLDQSLKQILRE 576
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 39/318 (12%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
++ A+EI M G D T +++++ +C +D + + + EM+ GF +V
Sbjct: 105 GQIAEAMEIFREMEEKGSAPDSFTYNILINGLC--KDAQLEMGVSLMDEMQARGFSPTVV 162
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV-----------IVQED 256
YT +I +V A+ IL++M+ GI P+ V YT ++ G+ +++E
Sbjct: 163 TYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEM 222
Query: 257 YVKAEE--------------------------LFDELLVLGLVPDVYTYNVYINGLCKQN 290
++ E DE+++ G P+ TY I+GLC++
Sbjct: 223 KLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKG 282
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ ++ M +G + DV+ YN+L+ LCK+ EL+ RE+ M KG+ ++ TY+
Sbjct: 283 SFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYT 342
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I GL G + EA GL++E KG+ S + I G Q AL+L+ +M
Sbjct: 343 SLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSN 402
Query: 411 DVSPGARVWEALLLSSVS 428
+ P +++ L S S
Sbjct: 403 GLMPAGDIYKILFKSLYS 420
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D++ Y+ +NG+ + +A E+F E+ G PD +TYN+ INGLCK +E G+ ++
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M+ G P V+TY TL+ C ++ +++ EM+ +GI N TY+ +I GL
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 360 GDIIEACGLLEEALNKG--LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G++ A +L+E +G C + + I GLCQ+GL +E L +M P
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269
Query: 418 VWEALLLSSVSKLDFVNTSFIRLVDQILNTPCKME 452
+ AL+ K F+ + L+++++ C+++
Sbjct: 270 TYTALIHGLCQKGSFLEAAV--LLNEMVAIGCELD 302
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y+ I L KK ++ +A+ I +M+ G PD Y +++NG+ L D
Sbjct: 91 VISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMD 150
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G P V TY I+G C V+A + ++ ME G P+ +TY L+Q LC
Sbjct: 151 EMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCG 210
Query: 326 ELNRLRELVKEMKWKG--IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
E+ R ++KEMK +G N+ TY+ +I GL KG L+E + G ++
Sbjct: 211 EVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNAT 270
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
+ I GLCQ+G +A LL +M ++ +L+ L + +LDF I +V
Sbjct: 271 YTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMV 330
Query: 442 DQ 443
++
Sbjct: 331 EK 332
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 124/250 (49%), Gaps = 4/250 (1%)
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
++ +C++ ++ E + +EM++ G Y +I L K ++ + ++++M++
Sbjct: 98 INGLCKKGQIA--EAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQAR 155
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G P +V YT +++G A ++ DE+ G+ P+ TY I GLC VE
Sbjct: 156 GFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERA 215
Query: 296 IKMIACMEELGSK--PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
I ++ M+ G++ P+V+TY L+ LC+ E + EM G N TY+ +I
Sbjct: 216 ILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALI 275
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GL KG +EA LL E + G +++ I GLC+ G + A E+ M +K V+
Sbjct: 276 HGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVA 335
Query: 414 PGARVWEALL 423
P + +L+
Sbjct: 336 PDVFTYTSLI 345
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 133/271 (49%), Gaps = 35/271 (12%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ G + EM + + ++ L K+ K+ +A ++ M +G+ PD+ Y +
Sbjct: 241 DKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNAL 300
Query: 248 LNGVIVQEDYVKAEELFDELLVLGL----------------------------------- 272
++G + ++ KA+ +F+ + +G+
Sbjct: 301 MDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENV 360
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDV Y+ I+GLCK + + +K + M + G P+VITY +L+ ALCK ++++
Sbjct: 361 IPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIA 420
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+K++K +GI N+ TY+I++DGL G + +A + ++ L KG + I GLC
Sbjct: 421 LLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLC 480
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ L +AL LL +M DK P A +E ++
Sbjct: 481 KESLFDEALTLLSKMEDKGCVPDAIAYETII 511
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 111/218 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I L K + V DA + +M + P++V YT ++ G + KA L +
Sbjct: 189 VVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLN 248
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+++ + P+V T+N ++GLCK+ + ++A M + G PDV TYN L+ V+
Sbjct: 249 EMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVK 308
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E + + + M G+ ++ +YS+MI GL+ + EA L E N+ + +
Sbjct: 309 EAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYS 368
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G + AL+ + +M D+ P + +L+
Sbjct: 369 SLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLI 406
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 111/229 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
Q M+ G + +I S ++ A + ++ G +PDI+ YT ++ G+ +
Sbjct: 73 QRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLN 132
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
++ D L+ G+ D +Y INGLCK ++++ +E +PDV+ Y
Sbjct: 133 GQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMY 192
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NT++ LCK + + +L EM K + N+ TY+ +I G G + +A GLL E +
Sbjct: 193 NTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVL 252
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
K + F+ + GLC+ G +R+A L+ M + V P + AL+
Sbjct: 253 KNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALM 301
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 116/213 (54%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M ++G + Y+ +I L K + + +A+ + M+++ + PD+V Y+ +++G+
Sbjct: 320 MAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGR 379
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A + DE+ G P+V TY I+ LCK + V+ I ++ +++ G + ++ TYN
Sbjct: 380 INSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNI 439
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK L +++ +++ KG +++ TYSIMI+GL + EA LL + +KG
Sbjct: 440 LVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG 499
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ ++ I ++ + KA +LL++M D
Sbjct: 500 CVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ M N+ D S ++ +C+ ++S L +V EM G ++ YT++
Sbjct: 348 AMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINS--ALKYVDEMHDRGQPPNVITYTSL 405
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +L K +V A+ +L ++K GI+ ++ Y ++++G+ A+++F +LL+ G
Sbjct: 406 IDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGH 465
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
DV TY++ INGLCK++ + + +++ ME+ G PD I Y T++ A + ++ +
Sbjct: 466 NVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEK 525
Query: 333 LVKEM 337
L++EM
Sbjct: 526 LLREM 530
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 109/218 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT++I ++ A G+LN+M + P++ + +++G+ + +A+ L
Sbjct: 224 VVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVA 283
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ PDV+TYN ++G + M ++G DV +Y+ ++ L K++
Sbjct: 284 VMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMK 343
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L+ +L + M+ + ++ ++ YS +IDGL G I A ++E ++G +
Sbjct: 344 MLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYT 403
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC+ V KA+ LLK++ D+ + + L+
Sbjct: 404 SLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILV 441
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 12/252 (4%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + G A + N M G D + S+++S + + + L DE + + M+
Sbjct: 305 FLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKML--DEAMDLFEGMRNENVIP 362
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y+++I L K ++ AL +++M G P+++ YT +++ + KA L
Sbjct: 363 DVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALL 422
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G+ ++YTYN+ ++GLCK + K+ + G DV+TY+ ++ LCK
Sbjct: 423 KKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKE 482
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL-------NKGL 377
+ L+ +M+ KG V + Y +I+ K +A LL E + N
Sbjct: 483 SLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMIDCVDYKDNGDT 542
Query: 378 CTQSSMFDETIC 389
C Q +DE IC
Sbjct: 543 CDQ---YDEFIC 551
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C++ D+ + + K G +V +
Sbjct: 111 GFYEEILEC----GYPASLYFFNILMHRFCKEGDIRVAQ--SVFNAITKWGLRPSVVSFN 164
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+L
Sbjct: 165 TLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK 224
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 225 GLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 284
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 285 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISG 344
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P + ++
Sbjct: 345 LCQEGRYLDAEKVLREMLSAGLKPDTGTYTMII 377
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M G D T S++++ +C++ + D+ EM G
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDKGLVPN 229
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 230 GVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLID 289
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 290 EMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEG 349
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 350 RYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 400
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M++ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 214 ANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRV--DLAMEIYKQMLSQSLSPDLITYNTL 271
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 272 IYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENI 331
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ K++ M G KPD TY ++ CK ++ +
Sbjct: 332 RLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSK 391
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 392 LLKEMQRDGHVPSVVTYNVLMNG 414
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 124/234 (52%), Gaps = 3/234 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM-K 233
++S C+ + S + + + MK+ GF +V + +I + K K+ AL + ++ K
Sbjct: 50 VISGFCKANRIESAKTV--LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLK 107
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
+ KP ++ YT+++ I++ +A +L DE+L GL PD +TYNV GLCK+ V+
Sbjct: 108 DNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVD 167
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ + + G KPDVITYN LL+AL + + + + E+ +G N+ TYSI+I
Sbjct: 168 RAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILI 227
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
L G I E+ L++ KGL + +D I C+ G + A+E L M
Sbjct: 228 SSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 174/367 (47%), Gaps = 21/367 (5%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P AY+ VI + ++ +VLD + KR+ F +I T+ + ++
Sbjct: 41 KPDVFAYNAVISGFCKANRIESAKTVLDRM-KRKGFSPDVVTHNIMIGTFCGKGKIDLAL 99
Query: 137 NLFYKIPK----------FRI--------NRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+F ++ K + I + A+++L+ M++ G D T ++I
Sbjct: 100 KVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRG 159
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C++ + D FV+ + G ++ Y ++R+L+ + K + ++++ S G +
Sbjct: 160 LCKEGKV--DRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCE 217
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P++V Y+++++ + ++ L + GL PD Y Y+ I C++ ++ I+
Sbjct: 218 PNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEF 277
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ CM G PD++ YNT++ ALCK + E+ ++ G N+ +Y+ M+ L S
Sbjct: 278 LDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWS 337
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
GD A G++ + L+KG+ ++ I LC+ G+V +A+ LL M P
Sbjct: 338 SGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVS 397
Query: 419 WEALLLS 425
++ +LL
Sbjct: 398 YKTVLLG 404
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 133/276 (48%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A E + + + G D T +++L ++ Q DE ++ E+ G +V
Sbjct: 164 GKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKW--DEGEKWMSEIFSRGCEPNVV 221
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +I SL + K+ +++ ++ MK G+ PD CY ++ + A E D +
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G +PD+ YN + LCK N + +++ ++E+G P+V +YNT+L AL +
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR 341
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
R ++ +M KGI ++ TY+ +I L G + EA GLL + L+ +
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTV 401
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ + A+E+L M + P + L+
Sbjct: 402 LLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLI 437
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 136/299 (45%), Gaps = 21/299 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ + + C+P Y+ +++ L ++ + + I R E + LI +
Sbjct: 172 FVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR-GCEPNVVTYSILISSL 230
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ ++SVNL K+ K + + D +C D ++++ C + L
Sbjct: 231 CRDGKIEESVNLV-KVMKEK------------GLTPDAYCYDP-----LIAAFCREGKL- 271
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + F+ M GF +V+Y ++ +L K A+ I ++ G P++ Y
Sbjct: 272 -DMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNT 330
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+L+ + D +A + ++L G+ PDV TYN I+ LC+ V+ I ++A M
Sbjct: 331 MLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGR 390
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+P++++Y T+L LCK ++ E++ M G N TY+++I+G+ G +A
Sbjct: 391 FQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQA 449
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 2/237 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S+++SS+C RD +E + V+ MK+ G Y +I + ++ K+ A+ L+
Sbjct: 222 TYSILISSLC--RDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M DG PDIV Y ++ + + A E+F +L +G P+V +YN ++ L
Sbjct: 280 CMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSG 339
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + MI+ M G PDVITYN+L+ LC+ ++ L+ +M N+ +Y
Sbjct: 340 DRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYK 399
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
++ GL I +A +L + G + + I G+ G +A+EL +
Sbjct: 400 TVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 37/252 (14%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +I+ + A ++ ++ G KPD+ Y V++G A+ + D +
Sbjct: 14 TKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKR 72
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIA-CMEELGSKPDVITYNTLLQA-------- 320
G PDV T+N+ I C + ++ +K+ +++ KP +ITY L++A
Sbjct: 73 KGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGID 132
Query: 321 ---------------------------LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
LCK +++R E V+ + +G ++ TY+I++
Sbjct: 133 EALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILL 192
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L ++G E + E ++G + I LC+ G + +++ L+K M +K ++
Sbjct: 193 RALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLT 252
Query: 414 PGARVWEALLLS 425
P A ++ L+ +
Sbjct: 253 PDAYCYDPLIAA 264
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 37/186 (19%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PDV I G N++ +++ +E+ G KPDV YN ++ CK + + +
Sbjct: 8 PDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTV 66
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASK---------------------------------- 359
+ MK KG ++ T++IMI K
Sbjct: 67 LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126
Query: 360 --GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G I EA LL+E L++GL + ++ GLC+ G V +A E ++ + + P
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186
Query: 418 VWEALL 423
+ LL
Sbjct: 187 TYNILL 192
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ +++ M++ G D T + ++S +C RD DE +G + +M F +V Y V
Sbjct: 344 ALGMISQMLSKGIDPDVITYNSLISCLC--RDGMVDEAIGLLADMLSGRFQPNIVSYKTV 401
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K ++ DA+ +L M +G +P+ YT+++ G+ +A EL + L ++
Sbjct: 402 LLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNA 461
Query: 273 VPD 275
+ +
Sbjct: 462 ISE 464
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 140/271 (51%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++N M G + T ++++ C++ L +E + EM G V Y +
Sbjct: 408 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRL--EEARNVLDEMSGKGLALNAVGYNCL 465
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +L K EKV DAL + M S G KPDI + ++ G+ + +A L+ ++L+ G+
Sbjct: 466 ISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGV 525
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ + TYN I+ ++ ++ +K++ M G D ITYN L++ALC+ + +
Sbjct: 526 IANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLA 585
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++M KG+ N + +I+I+GL G+I A L + +++GL ++ I GLC
Sbjct: 586 LFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLC 645
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++AL L ++ + + P A + L+
Sbjct: 646 KTGRAQEALNLFDKLQVEGICPDAITYNTLI 676
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 173/397 (43%), Gaps = 57/397 (14%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+ Y+ +I L +F I ++L + K+E E +FI ++K Y A + L
Sbjct: 112 DVYYMLIDKLGAAGEFKTIDALLMQM-KQEGIVFRESLFILIMKHYGRAGLPGQATRLLL 170
Query: 141 KI-------PKFRINRVGFAIEIL---NC----------MINDGFCVDGKTCSLILSSVC 180
+ P FR V +++L NC M++ G T +++ ++C
Sbjct: 171 DMRGVYSCEPTFRSYNV--VLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALC 228
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
++ D +++M + G + Y +I +L K +V + L +L +M G PD
Sbjct: 229 LVNEV--DSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPD 286
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV-------- 292
+ + ++G+ +A +L D +L+ G P+ +TY V ++GLC+ V
Sbjct: 287 VNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN 346
Query: 293 ------------------------EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
EA M M +G PD+ TYNTL+ LCK L
Sbjct: 347 KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 406
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
REL+ EM+ KG N+ TY+I+ID +G + EA +L+E KGL + ++ I
Sbjct: 407 SARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLI 466
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
LC+ V+ AL + M+ K P + +L+
Sbjct: 467 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 503
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ M +G + Y +I L KK + A ++N+M+ G +P+++ YT++++ +
Sbjct: 378 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 437
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A + DE+ GL + YN I+ LCK V+ + M M G KPD+ T+
Sbjct: 438 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 497
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N+L+ LCKV + L ++M +G++ N TY+ +I +G + EA L+ + L
Sbjct: 498 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 557
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+G ++ I LC+ G + K L L + M K ++P
Sbjct: 558 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 597
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 126/261 (48%), Gaps = 7/261 (2%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
V M GF Y ++ L + KV +A +LN++ + P++V + ++NG +
Sbjct: 309 LVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYV 364
Query: 253 VQEDYVKAEELFDE-LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ +A+ + E +L +G PD++TYN I GLCK+ + + +++ M+ G +P+V
Sbjct: 365 SRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 424
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
ITY L+ CK L R ++ EM KG+ LN Y+ +I L + +A + +
Sbjct: 425 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 484
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+KG F+ I GLC+ +AL L + M + V + L+ + + +
Sbjct: 485 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544
Query: 432 FVNTSFIRLVDQILNTPCKME 452
++LV+ +L C ++
Sbjct: 545 MQEA--LKLVNDMLFRGCPLD 563
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 138/335 (41%), Gaps = 44/335 (13%)
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT------------------C 172
+F ++ F+K P F I+ GF + + N+ +D T
Sbjct: 15 KFTKNLQYFFKTPSFSISPSGFNRFYNDTVFNNTNGLDSGTEWERLLKPFDLPELRTSLT 74
Query: 173 SLILSSVCEQRDLSSD-----ELLGFVQEMKKLGFCFGMVDYTNVIRSL--VKKEKVFDA 225
+ +C+ +L D EL + K G+C Y +I L + K DA
Sbjct: 75 RITPYQLCKLLELPLDVPTSMELFQWAGTQK--GYCHMFDVYYMLIDKLGAAGEFKTIDA 132
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA-------EELFDELLVLGLVPDVYT 278
L L QMK +GI + +++ + Y +A L D V P +
Sbjct: 133 L--LMQMKQEGIVFRESLF------ILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRS 184
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YNV ++ L N + + M G P V T+ +++ALC V E++ L+K+M
Sbjct: 185 YNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMT 244
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G V N Y +I L G + E LLEE L G + F++ I GLC+ +
Sbjct: 245 RHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIH 304
Query: 399 KALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+A +L+ +M + +P + + L+ L + K+D
Sbjct: 305 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVD 339
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G + +C+++++ +C ++ L F+++M G +V Y ++I L K
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQ--HALEFLRDMIHRGLTPDIVTYNSLINGLCKT 647
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +AL + ++++ +GI PD + Y +++ + + A L + G +P+ T+
Sbjct: 648 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 707
Query: 280 NVYINGLCKQNNVE 293
+ ++ K+ + E
Sbjct: 708 YILVSNFIKEGDQE 721
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 189/432 (43%), Gaps = 36/432 (8%)
Query: 10 ANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLH 69
A+ H R H AKW +T + A+ + Q+ ++ L+H
Sbjct: 37 ADYHNRDHGT-------AKWTRTPPKPPARSGGGANRRLRGLVQRGELDGALR----LVH 85
Query: 70 SFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADA 129
S S +P + +IK L + + D V++ + T + ++ Y A
Sbjct: 86 SISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSATIIT----YNTMVNGYCRA 141
Query: 130 HRFQDSVNLFYKIP----KFRINRVGFAIEILNC----------MINDGFCVDGKTCSLI 175
+ + +P F N + A+ + C M++ G T S++
Sbjct: 142 GNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSIL 201
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L + C++ +L + EM+ G +V Y +I ++ + V +AL +LN + S
Sbjct: 202 LDATCKESGYKQAVVL--LDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSY 259
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G KPD V YT VL + E + +A++L ++ PD T+N I LC++ V
Sbjct: 260 GCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRA 319
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNR----LRELVKEMKWKGIVLNLQTYSI 351
K++A M E G PD+ITY++++ LCK R ++ L+EL+ EM K + + T++
Sbjct: 320 TKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNT 379
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG-LCQRGLVRKALELLKQMADK 410
+I L KG A +++E G + ++ + G LC+ +AL+LL M
Sbjct: 380 IITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSN 439
Query: 411 DVSPGARVWEAL 422
+ P +++L
Sbjct: 440 GLCPDTTTYKSL 451
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 39/254 (15%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +IR+L + V DAL + + M G P +V Y+++L+ + Y +A L DE+
Sbjct: 163 YNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMR 222
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE-- 326
G PD+ TYNV IN +C Q +V +K++ + G KPD +TY +L++LC
Sbjct: 223 SKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWE 282
Query: 327 ---------------------------------LNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ R +++ +M G ++ TYS ++
Sbjct: 283 EADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIM 342
Query: 354 DGLASKGDIIEACGLLEEAL----NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
DGL + + EA LL+E L +K F+ I LCQ+GL +A++++ +M++
Sbjct: 343 DGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSE 402
Query: 410 KDVSPGARVWEALL 423
P + ++
Sbjct: 403 HGCIPDITTYNCIV 416
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 9/271 (3%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCFGMVD 208
VG A+++LN + + G D T + +L S+C +R +D+LL +M V
Sbjct: 246 VGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLL---TKMFSNDCAPDEVT 302
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI----VQEDYVKAEELF 264
+ VI SL +K V A +L QM G PDI+ Y+ +++G+ V E +EL
Sbjct: 303 FNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELL 362
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA-LCK 323
E++ +PD T+N I LC++ + IK++ M E G PD+ TYN ++ LCK
Sbjct: 363 AEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCK 422
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ +L+ M G+ + TY + GL+ + ++ A G+ GL +
Sbjct: 423 SCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKML 482
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSP 414
++ + GLC++ A++ M P
Sbjct: 483 YNAILLGLCKKWRTDLAIDFFAYMVSNGCMP 513
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 120/252 (47%), Gaps = 8/252 (3%)
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
C++++ +C ++ E + ++ LG ++ Y ++ + + A +++
Sbjct: 99 CNILIKKLCADGRVADAERV-----VEALGPSATIITYNTMVNGYCRAGNIDAARRMIDS 153
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
+ PD Y ++ + V+ + A +FD++L G P V TY++ ++ CK++
Sbjct: 154 VP---FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESG 210
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ + ++ M G +PD++TYN L+ A+C ++ +++ + G + TY+
Sbjct: 211 YKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTP 270
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
++ L S EA LL + + F+ I LCQ+G V +A ++L QM++
Sbjct: 271 VLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHG 330
Query: 412 VSPGARVWEALL 423
+P + +++
Sbjct: 331 CTPDIITYSSIM 342
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 26/308 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+L+S Y C+P Y V+K+L + ++ + +L + N P+ + + + T
Sbjct: 252 VLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKM--FSNDCAPDEVTFNAVITS 309
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR--D 184
F VG A ++L M G D T S I+ +C++R D
Sbjct: 310 LCQKGF-----------------VGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVD 352
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ L + EM V + +I SL +K A+ ++++M G PDI Y
Sbjct: 353 EAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTY 412
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVL---GLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
+++G + + K EE D L ++ GL PD TY GL +++ +E I M
Sbjct: 413 NCIVDGFLCKS--CKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRR 470
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
++ +G PD + YN +L LCK + + M G + + TY I+++G+A +G
Sbjct: 471 VQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGF 530
Query: 362 IIEACGLL 369
+ EA LL
Sbjct: 531 LEEAKELL 538
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 6/242 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D L V + G ++ +I+ L +V DA ++ + G I+ Y +
Sbjct: 78 DGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GPSATIITYNTM 134
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG + A + D + PD +TYN I LC + V + + M G
Sbjct: 135 VNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGC 191
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P V+TY+ LL A CK + L+ EM+ KG ++ TY+++I+ + S+GD+ EA
Sbjct: 192 SPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALK 251
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+L + G + + + LC +A +LL +M D +P + A++ S
Sbjct: 252 VLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLC 311
Query: 428 SK 429
K
Sbjct: 312 QK 313
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 149/354 (42%), Gaps = 40/354 (11%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL CEP Y+ +I + + VL+ + + + ++K+
Sbjct: 217 LLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSY-GCKPDAVTYTPVLKSL 275
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ R++++ L K M ++ D T + +++S+C++
Sbjct: 276 CSSERWEEADKLLTK------------------MFSNDCAPDEVTFNAVITSLCQK---- 313
Query: 187 SDELLGFV-------QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ----MKSD 235
GFV +M + G ++ Y++++ L K+ +V +A+ +L + M S
Sbjct: 314 -----GFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSK 368
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING-LCKQNNVEA 294
PD V + ++ + + + +A ++ DE+ G +PD+ TYN ++G LCK E
Sbjct: 369 NCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEE 428
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ M G PD TY +L L + E+ R + + ++ G+ + Y+ ++
Sbjct: 429 ALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILL 488
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
GL K A ++ G S + + G+ G + +A ELL ++
Sbjct: 489 GLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 159/368 (43%), Gaps = 27/368 (7%)
Query: 71 FSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAH 130
F C P Y +I L + + +LD + R + +I+ A
Sbjct: 21 FREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR-GIPPGVAVHNGVIRGLCKAG 79
Query: 131 RFQDSVNLFYKIP---------KFRI--------NRVGFAIEILNCMINDGFCVDGK-TC 172
RF D++ F + F I RV A +I M C+ T
Sbjct: 80 RFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTY 139
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ +++ +C +D D + + M + G C ++ Y+ ++ L K + +L +M
Sbjct: 140 TTVINGLC--KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G +PD++ Y +LNG+ +A EL ++ G P V TYN + C+ V
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++I M E G PDVI YNT++ LC+ L+ + L+K+M V ++ TYS +
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317
Query: 353 IDGLA------SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
IDGL + + AC +LE G + + I GLC+ ++AL LL++
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377
Query: 407 MADKDVSP 414
M D +V P
Sbjct: 378 MIDSEVVP 385
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 1/219 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMK-SDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ + ++ +LVK +V +A I M S P++V YT V+NG+ +A EL
Sbjct: 100 IITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL 159
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
D + G P+V TY+V + GLCK + G ++ M G +PDVI YNTLL LCK
Sbjct: 160 DLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKS 219
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R L+ ELV+ M G + TY+ +++ + A L++ +G +
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ + A LLKQM P + ++
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 3/224 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EIL M G + T ++++ +C R S + L ++ M + ++ V
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRAR--KSQQALALLRRMIDSEVVPDLSSFSMV 393
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K + A I M KP+ V Y +++G+ + KA +F EL+V
Sbjct: 394 IGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESF 452
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V TYN ++GLC +E ++M+ M PD +Y L++ LC+V + E
Sbjct: 453 RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYE 512
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L + ++ KG + + Y+++++ L K + +A G+ + + G
Sbjct: 513 LFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 15/287 (5%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +V A ++ M G D + +++ +C RD D+ +++M
Sbjct: 253 RSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC--RDARLDDAQALLKQMVAARCVPD 310
Query: 206 MVDYTNVIRSLVKKEKV------FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
++ Y+ +I L K +V A IL MK G P+ Y +V+ G+ +
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQ 370
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A L ++ +VPD+ ++++ I LCK ++++A K+ M E KP+ + Y L+
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430
Query: 320 ALCKVRELN---RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L K E++ R+ EL+ E G+ TY+ ++DGL G I EA ++E ++K
Sbjct: 431 GLSKGGEVDKAVRVFELMVESFRPGVA----TYNSVLDGLCGVGRIEEAVRMVEGMIHKE 486
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + I GLC+ V +A EL + + K + V+ L+
Sbjct: 487 CFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 5/228 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQE----MKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
T S I+ +C+ + +D L E MK+ G Y VI L + K AL
Sbjct: 313 TYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQAL 372
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+L +M + PD+ ++MV+ + D A ++F + P+ Y I+GL
Sbjct: 373 ALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGL 432
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
K V+ +++ M E +P V TYN++L LC V + +V+ M K +
Sbjct: 433 SKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG 491
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+Y +I GL + EA L + KG + +++ + LC++
Sbjct: 492 ASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKK 539
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 131/264 (49%), Gaps = 6/264 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V +
Sbjct: 122 GFYEEILEC----GYPASLYFFNILMHKFCKDGDIRVAQ--SVFNAITKWGLRPSVVSFN 175
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + M + G++PD+ Y++++NG+ + A ELFDE+L
Sbjct: 176 TLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDK 235
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LC+ +L +
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQA 295
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
R+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 296 RDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISG 355
Query: 391 LCQRGLVRKALELLKQMADKDVSP 414
LCQ G A ++L++M + P
Sbjct: 356 LCQEGRYLDAEKVLREMLSVGLKP 379
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 108/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +F+ + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWG 166
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V ++N +NG + +++ G ++ M G +PDV TY+ L+ LCK +++
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 227 ELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A +L+ +M+ K + P + L+
Sbjct: 287 CRKGDLKQARDLIDEMSMKGLKPDKITYTTLI 318
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + M G D T S++++ +C++ + D+ EM G
Sbjct: 183 RLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDKGLVPN 240
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLID 300
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 301 EMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEG 360
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 361 RYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M++ D T + ++ +C + DL L + EM G +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDL--IDEMSMKGLKPDKI 312
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + I+ D V YT +++G+ + Y+ AE++ E+
Sbjct: 313 TYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREM 372
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L +GL PD TY + IN CK+ +V G K++ M+ G P V+T
Sbjct: 373 LSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 187/427 (43%), Gaps = 42/427 (9%)
Query: 27 AKWHQTLDQQQAKQNVKQSLTTPPTK-----QQQQIPKQPHILSSLLHSFSIYNCEPPPE 81
+K ++ L + + ++V L T T +Q ++ + IL ++ I P
Sbjct: 58 SKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGI---APDVV 114
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y V+ L + + D + + K + E +F F LI + +A + +++ L+ +
Sbjct: 115 TYTSVVDGLCRDGKM-DRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKE 173
Query: 142 I---PKFRINRVGFAIEILNCMINDGFC--------------VDGKTC-------SLILS 177
I ++ + V + I DGFC ++G+ C S +L
Sbjct: 174 ILTSSSWKPDVVTYTALI------DGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLH 227
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+C+ DL D+ L + M G +V YT +I L KV A ++++M +
Sbjct: 228 GLCKAGDL--DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCC 285
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PD V Y +L+G +A++LF E+ +PD TY + G C + +E
Sbjct: 286 PPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARF 345
Query: 298 MIACME-ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M+ G PDV+TY+ ++ + + E ++EM + + N TYS +IDGL
Sbjct: 346 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 405
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G + A +L+ +NK + F+ I LC+ G + +A +LL MA + PG
Sbjct: 406 CKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGM 465
Query: 417 RVWEALL 423
+ LL
Sbjct: 466 VTYTTLL 472
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 114/218 (52%), Gaps = 10/218 (4%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ YT ++R ++ +A +L MK+ GI PD+V Y++V+ G + +V+A E
Sbjct: 325 ITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQ 384
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ + P+ TY+ I+GLCK V+ ++++ M +P V T+N+++ ALC++
Sbjct: 385 EMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLG 444
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE--------EALNKGL 377
+++ +L+ M G+ + TY+ +++G + G + A L E + L
Sbjct: 445 DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANL 504
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+ + F I GLC+ + KA+ +++++ ++ P
Sbjct: 505 VPEQA-FSALIRGLCKAREIDKAMAVVEELRSRECEPA 541
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 94/172 (54%), Gaps = 3/172 (1%)
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P +V +T++++G +A F+++ + P+ TYNV +NGLCK +
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 298 MIACMEELGS-KPDVITYNTLLQALCKVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDG 355
++ M + S PD++TY+T++ CK E++R E+++EM + GI ++ TY+ ++DG
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
L G + AC ++ E KG+ F I G C V +AL+L K++
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEI 174
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 87/154 (56%), Gaps = 7/154 (4%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS--KPDVITYNTLLQALCKVRELNRLR 331
P V T+ + I+G CK N ++ + +AC E++ P+ TYN ++ LCK R ++
Sbjct: 5 PTVVTWTIIIDGFCKANQLK---QALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAY 61
Query: 332 ELVKEMK-WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK-GLCTQSSMFDETIC 389
E++KEM+ K + +L TYS +I+G +G++ AC +L E + + G+ + +
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G + +A E++++M K V P + AL+
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 155
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 169/351 (48%), Gaps = 22/351 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE--FIFIDLIKTYADAHRFQD 134
PPP F K L ++ S+VL ++ ++F P + LI ++ +R
Sbjct: 49 RPPPSIVDFS-KLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGF 107
Query: 135 SVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+ ++ I K ++G A+++ + M +GF D T +++
Sbjct: 108 AFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLIN 167
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+C+ + S+ + F++ M++ +V Y+ +I SL K ++ +AL + + M + GI
Sbjct: 168 GLCKVGNTSTA--IRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGI 225
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P+ Y+ +++G+ + + +A LF ++ ++PD T+N ++ LCK+ V
Sbjct: 226 SPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHY 285
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M + KPDV+TYN+L+ C E+ + + M KG V ++ +Y+ +I+G
Sbjct: 286 VVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYC 345
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
+ +A GL EE +GL + ++ I GLC G +R A+ L +M
Sbjct: 346 KIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV 396
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +L+S+ + S+ +L ++M G +I S ++ A +L +
Sbjct: 58 SKLLTSITRMKHYST--VLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDI 115
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G +P +T ++ G+ V+ +A +LFD++ G PDV TY INGLCK N
Sbjct: 116 LKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNT 175
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
I+ + ME+ +P V+ Y+T++ +LCK R+L L +M KGI N TYS +
Sbjct: 176 STAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSL 235
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I GL G EA L +++ + F+ + LC+ G+V KA ++ M D+
Sbjct: 236 IHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDL 295
Query: 413 SPGARVWEALL 423
P + +L+
Sbjct: 296 KPDVVTYNSLM 306
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 154/351 (43%), Gaps = 23/351 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L S NC P Y +I +L ++ Q + S+ + + F + LI
Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAK-GISPNNFTYSSLIHGL 239
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC-SLILSSVCEQRDL 185
+++++ LFY + I+R ++ + D C +G + + V Q DL
Sbjct: 240 CILGHWKEAIRLFYAM----IHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDL 295
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D +V Y +++ + ++ + + + M G P ++ YT
Sbjct: 296 KPD-----------------VVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYT 338
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++NG + KA LF+E+ GL+PD TYN I+GLC + I + M
Sbjct: 339 TLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVY 398
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G PD++TY L LCK L L+K ++ + ++ YSI++DG+ G++ A
Sbjct: 399 GQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAA 458
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
L + +KGL + I GLCQ+GL+ +A +L +M + SP A
Sbjct: 459 RDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNA 509
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 8/230 (3%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++ +L K+ V A +++ M +KPD+V Y +++G ++ + K +FD ++
Sbjct: 267 FNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMV 326
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G VP V +Y ING CK ++ + + M + G PD +TYNTL+ LC V L
Sbjct: 327 RKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L EM G + +L TY I+ D L + EA LL+ L ++ +
Sbjct: 387 DAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVM 446
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEAL--------LLSSVSKL 430
G+C+ G + A +L +++ K + P R + + LL+ SKL
Sbjct: 447 DGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 496
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + M G D T + ++ +C L + + EM G +V Y +
Sbjct: 353 AMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR--DAIALFHEMVVYGQIPDLVTYRIL 410
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
L K ++ +A+ +L ++ + PDI Y++V++G+ + A +LF +L GL
Sbjct: 411 FDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 470
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY + INGLC+Q + K+ M+E G P+ TYN + + + E R +
Sbjct: 471 HPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQ 530
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKG 360
L +EM +G +++ T +++++ L+ G
Sbjct: 531 LFQEMLSRGFSIDVSTTTLLVEMLSDDG 558
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 109/230 (47%), Gaps = 2/230 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ +G + + + M+ G + + +++ C+ + + D+ +G +EM + G V
Sbjct: 313 SEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIM--DKAMGLFEEMSQQGLIPDTV 370
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L ++ DA+ + ++M G PD+V Y ++ + + +A L +
Sbjct: 371 TYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVI 430
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L PD++ Y++ ++G+C+ +EA + + + G PDV TY ++ LC+ L
Sbjct: 431 EGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLL 490
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+L EM G N TY+++ G + + A L +E L++G
Sbjct: 491 AEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGF 540
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 3/281 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ +L M GF T + I +C + D++ L V+EM+ G +
Sbjct: 466 NRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTG--ALDMVREMRVHGHEPWIK 523
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +++ L K+++ +A L +M +G PDIV Y+ ++G + + +A E+F ++
Sbjct: 524 HYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDI 583
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G PDV YN ING CK V ++ M G P V+TYN L+ CK ++
Sbjct: 584 CARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDI 643
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++ + M K N+ TY+ +IDGL + G +A L E KG F
Sbjct: 644 DQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIAL 703
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
I GLC+ G AL ++M +++ +P V+ AL+ S +S
Sbjct: 704 IHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITSFIS 743
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 185/462 (40%), Gaps = 69/462 (14%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
VR S + +A +K +K +P + + + AK+ ++++L ++ I
Sbjct: 273 FVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPD 332
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFV---IKTLAENSQFCDISSVLDHIEKRENFETPEF 117
ILS L I C + Y + ++ L + +SVL+ + ++ + +
Sbjct: 333 IQILSKL-----IPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYY 387
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+ L D + VN F+ + + R F+I I DG C GK
Sbjct: 388 L---LXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVI------DGLCNTGKL----- 433
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
D L ++M ++G ++ Y N+I L ++ + +L +MK G
Sbjct: 434 -----------DLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSG 482
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL-------------------------- 270
+P + + + +ED A ++ E+ V
Sbjct: 483 FRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEAC 542
Query: 271 ---------GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
G +PD+ Y+ I+G K V+ +++ + G PDV+ YNTL+
Sbjct: 543 NFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGF 602
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CKV+ ++ +++ EM KG+V ++ TY+++IDG GDI +A L + K
Sbjct: 603 CKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNV 662
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC G A+ L +M K SP + AL+
Sbjct: 663 ITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALI 704
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 126/265 (47%), Gaps = 23/265 (8%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M + G+ D T + +L + C R D+ L E+ G+ G V + ++ + K
Sbjct: 185 MCDSGWEPDKYTLTSVLQAYCNSRKF--DKALSVFNEIYGRGWVDGHV-LSILVLTFSKC 241
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V A ++ +M+ GI+ + + ++++G + Q KA +LF ++ G PDV Y
Sbjct: 242 GEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVY 301
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL-RELVKEMK 338
+ I GLC + +E + +++ M+ELG PD+ + L+ + ++ RL E ++++
Sbjct: 302 DALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLD 361
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE----------ALNKGLCTQ------SS 382
+ ++L Y+ +++GL + + +A LL +NK + ++
Sbjct: 362 TEAMLL---LYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTT 418
Query: 383 MFDETICGLCQRGLVRKALELLKQM 407
F I GLC G + AL L + M
Sbjct: 419 SFSIVIDGLCNTGKLDLALSLFRDM 443
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP--DVITYNTLLQALCKVRELN 328
G PD YT + C + K ++ E+ + D + L+ K E++
Sbjct: 189 GWEPDKYTLTSVLQAYCNSRKFD---KALSVFNEIYGRGWVDGHVLSILVLTFSKCGEVD 245
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ EL++ M+ GI LN +T+ ++I G + + +A L ++ G S++D I
Sbjct: 246 KAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALI 305
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC + + KAL LL +M + + P ++ L+
Sbjct: 306 GGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI 340
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I V A+EI + G+C D + +++ C+ + +S E + EM G
Sbjct: 569 KIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVS--EAHDILDEMVAKGLVPS 626
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I K + A L++M +P+++ YT +++G+ A L++
Sbjct: 627 VVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWN 686
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK--PDVITYNTLLQALCK 323
E+ G P+ ++ I+GLCK +A + E+G + PD I Y L+ +
Sbjct: 687 EMRGKGCSPNRISFIALIHGLCKCGWPDAALLY---FREMGERETPDTIVYVALITSFIS 743
Query: 324 VRELNRLRELVKEMKWKG 341
+ E++KEM KG
Sbjct: 744 NKNPTLAFEILKEMVAKG 761
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 42/255 (16%)
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE-------------LLV------ 269
L +M G +PD T VL + KA +F+E +LV
Sbjct: 182 LKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKC 241
Query: 270 ---------------LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
LG+ + T+ V I+G +Q+ V+ +++ M++ G PDV Y
Sbjct: 242 GEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVY 301
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+ L+ LC +E+ + L+ EMK GI ++Q S +I + + DI L+EE L
Sbjct: 302 DALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYR---LIEERL- 357
Query: 375 KGLCTQSS--MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ L T++ +++ + GL V KA LL M + + V + ++ + +
Sbjct: 358 EDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRP-- 415
Query: 433 VNTSFIRLVDQILNT 447
TSF ++D + NT
Sbjct: 416 XTTSFSIVIDGLCNT 430
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A +IL+ M+ G T +L++ C+ D+ D+ + M
Sbjct: 604 KVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDI--DQAFHCLSRMVGKEREPN 661
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT +I L + DA+ + N+M+ G P+ + + +++G + + + A L+
Sbjct: 662 VITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHG-LCKCGWPDAALLYF 720
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+ PD Y I N +++ M G PD + N L
Sbjct: 721 REMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPLDKNDL 772
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 170/367 (46%), Gaps = 24/367 (6%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P A Y+ VI + ++ + +R ++ + +I + + +D+
Sbjct: 143 PSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDA 202
Query: 136 VNLFYKI---PKFRINRVGF---------------AIEILNCMINDGFCVDGKTCSLILS 177
+F ++ K N V + A+ M++ G + T +L +
Sbjct: 203 TKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVH 262
Query: 178 SV-CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
++ E R + E V+EM + G Y +I K+ K A+ + M G
Sbjct: 263 TLFMEGR---AAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKG 319
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I+ +V YT +++ + ++ + + LF++ + G+ PD++ YN IN C +++
Sbjct: 320 IRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAF 379
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ ME+ PD +TYNTL++ LC + L+ R L++EM +GI +L +Y+ +I G
Sbjct: 380 EIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGY 439
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ KGDI +A + +E + KG ++ I GLC G A +L+K+M ++P
Sbjct: 440 SMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDD 499
Query: 417 RVWEALL 423
+ +L+
Sbjct: 500 STYISLI 506
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 138/332 (41%), Gaps = 21/332 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYAD------AHR 131
P Y VI + + D + V D + E ++ LI Y D A R
Sbjct: 181 PDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALR 240
Query: 132 FQD------------SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
++ + NLF F R A ++ M G D T +++++
Sbjct: 241 YRGEMVDRGVSMTVATYNLFVHT-LFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGY 299
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C++ + + + M G +V YT++I +L K V + + N GI+P
Sbjct: 300 CKEG--KEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRP 357
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D+ Y ++N D +A E+ E+ + PD TYN + GLC ++ +I
Sbjct: 358 DLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLI 417
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M + G +PD+++YNTL+ ++ ++ EM KG L TY+ MI GL
Sbjct: 418 EEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLN 477
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
G +A L++E + G+ S + I GL
Sbjct: 478 GQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 7/181 (3%)
Query: 192 GFVQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
G VQE +L G + Y +I S + A I+ +M+ I PD V Y
Sbjct: 338 GMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTY 397
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ G+ + +A L +E+ G+ PD+ +YN I+G + +++ +K+ M
Sbjct: 398 NTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMG 457
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G P ++TYN +++ LC + +LVKEM GI + TY +I+GL ++ + +
Sbjct: 458 KGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLA 517
Query: 365 A 365
A
Sbjct: 518 A 518
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EI+ M D T + ++ +C L DE G ++EM K G +V Y +
Sbjct: 378 AFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRL--DEARGLIEEMTKRGIQPDLVSYNTL 435
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K + DA+ + ++M G P ++ Y ++ G+ + AE+L E++ G+
Sbjct: 436 ISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGI 495
Query: 273 VPDVYTYNVYINGLCKQN 290
PD TY I GL ++
Sbjct: 496 TPDDSTYISLIEGLTTED 513
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+N +L+ LC + R EL+++M N TY+ +I G ++G + ++ E
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPSP----NAVTYNTVIAGFCARGRVQAGIEIMREM 173
Query: 373 LNK-GLCTQSSMFDETICGLCQRGLVRKALELLKQM-ADKDVSPGARVWEALL 423
+ G+ + I G C+ G V A ++ +M + V P A ++ AL+
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALI 226
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 140/283 (49%), Gaps = 3/283 (1%)
Query: 142 IPKFRINRVGF-AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
I F IN + F A++ ++ G+ D T +++ + + + + L +QEM+K
Sbjct: 132 INGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKA--ALHLLQEMEKS 189
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
+V Y+ +I L K V DALG+ +Q+ GI D V Y +++G + +
Sbjct: 190 SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEV 249
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+L +++ + PD YT+N+ I+ LCK+ + ++A M + G KPD++TYN L++
Sbjct: 250 TQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEG 309
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C ++ REL M +G+ ++ Y+++IDG + EA L +E NK L
Sbjct: 310 YCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT 369
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I GLC G + +LL +M P + L+
Sbjct: 370 IASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 124/233 (53%), Gaps = 3/233 (1%)
Query: 208 DYT-NV-IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
DYT N+ I +L K+ ++ +A G+L M G KPDIV Y ++ G +E+ +A ELF+
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ GL PDV YNV I+G CK V+ + + + P + +YN+L+ LC
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +++L+ EM ++ TY+I+ID L +G I+EA G+L + KG+ ++
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
+ G C R V A ++ +M + P + +L++ K + V+ + +
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYN-VLINGYCKTEMVDEAIV 496
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++L M+ + D T ++++ ++C++ + E G + M K G +V Y ++
Sbjct: 251 QLLTKMVRENVDPDDYTFNILIDALCKEGRIL--EAQGVLAMMSKRGEKPDIVTYNALME 308
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+E V +A + N+M G++PD++ Y ++++G + +A LF EL LVP
Sbjct: 309 GYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVP 368
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK-VRELNRLREL 333
+ +YN I+GLC + K++ M PDV+TYN L+ ALCK R L L L
Sbjct: 369 TIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVL 428
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V MK KG+ N+ TY+ M+DG + ++ A + + GL ++ I G C+
Sbjct: 429 VMMMK-KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
+V +A+ L K+M K++ P + +L+
Sbjct: 488 TEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 176/388 (45%), Gaps = 43/388 (11%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDL 122
++ LL N +P ++ +I L + + + VL + KR E P+ + + L
Sbjct: 249 VTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG--EKPDIVTYNAL 306
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC-MINDGFC----VDGK------- 170
++ Y ++ LF R+ + G ++LN ++ DG+C VD
Sbjct: 307 MEGYCSRENVHEARELFN-----RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 171 ----------TCSLILSSVCEQRDLSS-----DELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ + ++ +C +S DE+ G Q +V Y +I +
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD-------VVTYNILIDA 414
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K+ ++ +ALG+L M G+KP+IV Y +++G ++ + A+++F+ ++ GL PD
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD 474
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ YNV ING CK V+ I + M PD+ +YN+L+ LC + + ++EL+
Sbjct: 475 ILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLD 534
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM G ++ TY+I++D +A L + + +G+ + LC+
Sbjct: 535 EMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGE 593
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
++ A + LK + SP + + L+
Sbjct: 594 KLKMAEDALKHLLMHGCSPNVQTYTILI 621
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ +++ G + +T +I + A +L + G +P++V + ++NG
Sbjct: 75 ISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIING 134
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ KA + LL G + D +TY INGL K ++A + ++ ME+ +P+
Sbjct: 135 FCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPN 194
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
++ Y+ L+ LCK ++ L ++ +GI+L+ TY+ +IDG S G E LL
Sbjct: 195 LVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLT 254
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + + + F+ I LC+ G + +A +L M+ + P + AL+ S+
Sbjct: 255 KMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++ ++V+ A+ + Q++S GI P I +T+++N Q A L +L
Sbjct: 58 FDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATIL 117
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P++ T+N ING C + + + G D TY TL+ L K ++
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L++EM+ + NL YS +IDGL G + +A GL + +G+ + ++ I
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C G ++ +LL +M ++V P + L+
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILI 272
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%)
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
K G+ +V + +I +F AL + + G D Y ++NG+
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
A L E+ + P++ Y+ I+GLCK V + + + + E G D +TYN+L+
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
C V + +L+ +M + + + T++I+ID L +G I+EA G+L +G
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + G C R V +A EL +M + + P + L+
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%)
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
V DA+ N+M P + +L ++ Y A LF +L G+ P + T+
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ IN Q++ ++A + + G +P+++T+NT++ C + + + + +
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G + + TY +I+GL+ G I A LL+E + M+ I GLC+ G V
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL L Q+ ++ + A + +L+
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLI 237
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N V A +I N M+ G D +++++ C+ + DE + +EM+ +
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMV--DEAIVLFKEMRHKNLIPDIA 511
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE- 266
Y ++I L ++ +L++M G PD++ Y ++L+ + + KA LF +
Sbjct: 512 SYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI 571
Query: 267 ---------------------------------LLVLGLVPDVYTYNVYINGLCKQNNVE 293
LL+ G P+V TY + IN LCK +
Sbjct: 572 VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFG 631
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ +++ ME+ PD IT+ ++ L + E ++ +L +EM +G+V
Sbjct: 632 EAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%)
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C+ NV+ + M + P ++ LL A+ ++ L +++ KGI ++
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
T++I+I+ + A LL L G F+ I G C G++ KAL+ +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 407 M 407
+
Sbjct: 151 L 151
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 41/298 (13%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++I+ C+ R++ ++ L F++EM++LG Y+++++S K V A+ + +M
Sbjct: 102 NIIIDGYCKARNI--EKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEM 159
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ G +PDIV + ++L+G+ +A ELF + G PDV TYN I GLCK +
Sbjct: 160 PAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKL 219
Query: 293 EAGIKMIACMEELGSKPDVITYNTLL---------------------------------- 318
+ + ++ M++ P +TY TL+
Sbjct: 220 DEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVL 279
Query: 319 ---QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
LCK R +E+ +EM+ +GI + TY+ +++GL S + +A L L++
Sbjct: 280 ILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQ 339
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
++ I LC+ V +A +LL M DK P ++WE LL L+ +LD
Sbjct: 340 VPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLD 397
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
V+EMK GF + + +IR K L++M G+ P+ + Y +++
Sbjct: 15 AIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLIS-C 73
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ + + E + + + P+V +YN+ I+G CK N+E + + MEELG P
Sbjct: 74 LCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTP 133
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
Y++++Q+ CK +++ ++ EM KG ++ +++++ GL I EA L
Sbjct: 134 HAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRS 193
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++G ++ I GLC+ + +A+ LL++M +DVSP + L+
Sbjct: 194 MNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLI 245
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 170/371 (45%), Gaps = 24/371 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
+C P +Y+ +I + + L +E+ + TP + +++++
Sbjct: 93 HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPH-AYSSIVQSFCKTGNVSK 151
Query: 135 SVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
++++F ++P +R ++ A E+ M + G D T + +++
Sbjct: 152 AMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIA 211
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+C+ + L DE + ++ MK+ V YT +I L K ++ A + +M
Sbjct: 212 GLCKWKKL--DEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPC 269
Query: 238 KPDIVCYT--MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
Y+ +++NG+ +A+E+F E+ G+ P V TYN + GL ++
Sbjct: 270 PCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDA 329
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+++ M + P++ TY L+ +LCK ++ +L+ M+ KG V +L+ + +++
Sbjct: 330 MELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSR 389
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETIC-GLCQRGLVRKALELLKQMADKDVSP 414
LA G + +A L +E +++ C Q + G+ +RG V +A + LKQM D + P
Sbjct: 390 LARAGRLDDAFELYKE-MSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVP 448
Query: 415 GARVWEALLLS 425
++ L++
Sbjct: 449 DKFTYDKLVVG 459
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ M + G + Y N+I L K + +A L +M P++V Y ++++G
Sbjct: 52 LDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCK 110
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ KA E+ LG P + Y+ + CK NV + + A M G +PD++
Sbjct: 111 ARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVN 170
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
+N LL L + R+++ REL + M +G ++ TY+ MI GL + EA LLE
Sbjct: 171 FNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMK 230
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ + + I LC+ +++A E+ ++MA+
Sbjct: 231 QEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAE 266
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 3/221 (1%)
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
IR LV+ + V A I+ +MK G PD+ + +++ G + + D +L GL
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ YN I+ LCK + + M + P+V++YN ++ CK R + +
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALA 119
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++EM+ G YS ++ G++ +A + E KG F+ + GL
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ + +A EL + M + P + ++ L KLD
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLD 220
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 138/319 (43%), Gaps = 21/319 (6%)
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
++ H L S + C+P Y+ +I L + + + +L+ + K+E+ +P F+
Sbjct: 182 RKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERM-KQEDV-SPTFV 239
Query: 119 -FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+ LI R Q + +F K+ + A +L ++++
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVL----------------ILIN 283
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+C+ R E QEM+ G +V Y ++ L+ K+ DA+ + M
Sbjct: 284 GLCKAR--RPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVP 341
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P++ Y ++++ + + +A +L + G VP + + V ++ L + ++ +
Sbjct: 342 APNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFE 401
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M + + V + N LL + + ++ ++ +K+M GIV + TY ++ GL
Sbjct: 402 LYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLC 461
Query: 358 SKGDIIEACGLLEEALNKG 376
+G +A L+EE + G
Sbjct: 462 WQGKADQARKLVEELVRDG 480
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 16/293 (5%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D K C+ +L + RD + D M + G C +V Y ++ S KK
Sbjct: 157 MVSKGLLPDVKNCNRVLR-LLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKK 215
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
V +AL +L QM++ G P+ V Y +++NG+ + +A+EL ++L LGL VYTY
Sbjct: 216 GMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTY 275
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I G C++ +E ++ M G+ P V+TYNT++ LCK ++ R+L+ M
Sbjct: 276 DPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVN 335
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
K ++ +L +Y+ +I G G+I EA L E + L ++ I GLC+ G +
Sbjct: 336 KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDV 395
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCKME 452
A+ L +M P F T+F+R ++ N P E
Sbjct: 396 AMRLKDEMIKHGPDPDV---------------FTFTTFVRGFCKMGNLPMAKE 433
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++ M+ G V T ++ CE+ + LG +EM G +V Y +
Sbjct: 256 AKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLG--EEMLSRGAVPTVVTYNTI 313
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K +V DA +L+ M + + PD+V Y ++ G + +A LF EL L
Sbjct: 314 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL 373
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V TYN I+GLC+ +++ +++ M + G PDV T+ T ++ CK+ L +E
Sbjct: 374 APSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKE 433
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM +G+ + Y I G GD +A G+ EE L +G ++ I GL
Sbjct: 434 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 493
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G +++A EL+K+M + P + +++
Sbjct: 494 KLGNLKEASELVKKMLYNGLVPDHVTYTSII 524
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + A E+ + M+N G D + I V E + + G +EM GF
Sbjct: 424 KMGNLPMAKELFDEMLNRGLQPD--RFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPD 481
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y I L K + +A ++ +M +G+ PD V YT +++ ++ KA LF
Sbjct: 482 LITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFL 541
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L G+ P V TY V I+ + ++ I M E G P+VITYN L+ LCKVR
Sbjct: 542 EMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVR 601
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL----CTQS 381
++++ EM+ KGI N TY+I+I+ + G EA L ++ L++ + CT
Sbjct: 602 KMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHR 661
Query: 382 SMF 384
S+
Sbjct: 662 SLL 664
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 162/386 (41%), Gaps = 26/386 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL C P Y+ ++ L+ + + ++ + R E + + LI+ Y
Sbjct: 224 LLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDM-LRLGLEVSVYTYDPLIRGY 282
Query: 127 ADAHRFQDSVNL-------------------FYKIPKFRINRVGFAIEILNCMINDGFCV 167
+ + +++ L Y + K+ RV A ++L+ M+N
Sbjct: 283 CEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKW--GRVSDARKLLDVMVNKNLMP 340
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D + + ++ ++ LL E++ +V Y +I L + + A+
Sbjct: 341 DLVSYNTLIYGYTRLGNIGEAFLL--FAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMR 398
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ ++M G PD+ +T + G + A+ELFDE+L GL PD + Y I G
Sbjct: 399 LKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL 458
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + M M G PD+ITYN + L K+ L ELVK+M + G+V +
Sbjct: 459 KLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHV 518
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ +I G + +A L E L+KG+ + I RG ++ A+ +M
Sbjct: 519 TYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEM 578
Query: 408 ADKDVSPGARVWEALL--LSSVSKLD 431
+K V P + AL+ L V K+D
Sbjct: 579 HEKGVHPNVITYNALINGLCKVRKMD 604
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 120/223 (53%), Gaps = 2/223 (0%)
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVLGLVPD 275
VKK + L + +M S G+ PD+ VL + +++ + A E+++ ++ G+ P
Sbjct: 142 VKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPT 201
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V TYN ++ CK+ V+ ++++ M+ +G P+ +TYN L+ L E+ + +EL++
Sbjct: 202 VVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQ 261
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
+M G+ +++ TY +I G KG I EA L EE L++G ++ + GLC+ G
Sbjct: 262 DMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWG 321
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
V A +LL M +K++ P + L+ ++L + +F+
Sbjct: 322 RVSDARKLLDVMVNKNLMPDLVSYNTLIY-GYTRLGNIGEAFL 363
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 120/253 (47%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++ +C DL D + EM K G + +T +R K + A + +
Sbjct: 379 TYNTLIDGLCRLGDL--DVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD 436
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M + G++PD Y + G + D KA + +E+L G PD+ TYNV+I+GL K
Sbjct: 437 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 496
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N++ +++ M G PD +TY +++ A L + R L EM KGI ++ TY+
Sbjct: 497 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYT 556
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++I A +G + A E KG+ ++ I GLC+ + +A +M K
Sbjct: 557 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAK 616
Query: 411 DVSPGARVWEALL 423
+SP + L+
Sbjct: 617 GISPNKYTYTILI 629
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 2/181 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++ M+ +G D T + I+ + L L F++ + K G +V YT +
Sbjct: 501 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAL-FLEMLSK-GIFPSVVTYTVL 558
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I S + ++ A+ +M G+ P+++ Y ++NG+ +A F E+ G+
Sbjct: 559 IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGI 618
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ YTY + IN C + + +++ M + +PD T+ +LL+ L K +L+ +R
Sbjct: 619 SPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHVVRH 678
Query: 333 L 333
L
Sbjct: 679 L 679
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 138/275 (50%), Gaps = 2/275 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N++ AI ++ MI+ G D + + +++ +C++ ++ + V++M+ G+ V
Sbjct: 111 NKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYA--MQLVEKMEDSGYPANTV 168
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +++ L + +L L+++ G+ P+ Y+ +L + +A L DE+
Sbjct: 169 TYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEI 228
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G P++ +YNV + GLCK+ +E I++ + G P+V++YN LL++LC
Sbjct: 229 IAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRW 288
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL+ EM + ++ TY+I+I LA G I +A +++E + ++ ++
Sbjct: 289 EEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPI 348
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
I LC+ G V + L QM SP + A+
Sbjct: 349 IARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAI 383
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 107/205 (52%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
++ DA L + +G KPD+V T +L + KA + + ++ G++PD +Y
Sbjct: 77 RISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYT 136
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+N LCK+ NV ++++ ME+ G + +TYNTL++ LC LN+ + + + K
Sbjct: 137 FLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQK 196
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G+V N TYS +++ + + EA LL+E + KG ++ + GLC+ G + +A
Sbjct: 197 GLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEA 256
Query: 401 LELLKQMADKDVSPGARVWEALLLS 425
+ L K + K SP + LL S
Sbjct: 257 IRLFKNLPSKGFSPNVVSYNILLRS 281
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 135/269 (50%), Gaps = 2/269 (0%)
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
RD+ + ++ + K G +V T ++ L K K+ A+ ++ M S GI PD
Sbjct: 73 NRDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDA 132
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
YT ++N + + + A +L +++ G + TYN + GLC N+ ++ +
Sbjct: 133 ASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDR 192
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
+ + G P+ TY++LL+A K R +N L+ E+ KG NL +Y++++ GL +G
Sbjct: 193 LMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGR 252
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
I EA L + +KG ++ + LC G +A ELL +M ++ SP +
Sbjct: 253 IEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYN- 311
Query: 422 LLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
+L+ S++ + + ++++D+++ P K
Sbjct: 312 ILIGSLAFHGKIEQA-LQVIDEMMMGPFK 339
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 128/278 (46%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ A L ++ +G D + +L +C+ + + + ++ M G
Sbjct: 74 RDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMK--KAIRVMEMMISCGIIPD 131
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
YT ++ L K+ V A+ ++ +M+ G + V Y ++ G+ + + K+ + D
Sbjct: 132 AASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLD 191
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L+ GLVP+ +TY+ + K+ V ++++ + G +P++++YN LL LCK
Sbjct: 192 RLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEG 251
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L K + KG N+ +Y+I++ L +G EA LL E + ++
Sbjct: 252 RIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYN 311
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I L G + +AL+++ +M P A + ++
Sbjct: 312 ILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPII 349
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 133/307 (43%), Gaps = 36/307 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
+++ L+ ++ G + T S +L + ++R + +E + + E+ G +V Y +
Sbjct: 186 SLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGV--NEAMRLLDEIIAKGGQPNLVSYNVL 243
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K+ ++ +A+ + + S G P++V Y ++L + + + +A EL E+
Sbjct: 244 LTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRER 303
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL----N 328
P + TYN+ I L +E +++I M KP +YN ++ LCK ++ N
Sbjct: 304 SPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVN 363
Query: 329 RLRELV------KEMKWKGIVL------------------NLQTYSI------MIDGLAS 358
L +++ E + I + N Q SI ++ L
Sbjct: 364 CLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCK 423
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
KG+ A LL E G S + I GLC G++ +A+E+ K + + P
Sbjct: 424 KGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDN 483
Query: 419 WEALLLS 425
+ AL+L
Sbjct: 484 FNALILG 490
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y V+ L KK + A +L +M G PD Y+ ++ G+ ++ +A E+F L
Sbjct: 414 YKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLE 473
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
PD+ +N I G CK + + +++ M E G P TY L++ + E
Sbjct: 474 EDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKE 533
Query: 329 RLRELVKEMKWKGIV 343
E+++E+ + ++
Sbjct: 534 LAAEVLRELHLRQVM 548
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 109/231 (47%), Gaps = 3/231 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++++ M+ F + + I++ +C++ + + ++ + +M G C N
Sbjct: 326 ALQVIDEMMMGPFKPTATSYNPIIARLCKEGKV--EAVVNCLDQMI-FGRCSPNEGTFNA 382
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + KV +A ++ + + Y V++ + + + A L E+ G
Sbjct: 383 IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGF 442
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD YTY+ I GLC + + +++ +EE +PD+ +N L+ CK + E
Sbjct: 443 TPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLE 502
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ + M KG + TY+I+++G+ + + A +L E + + +QS++
Sbjct: 503 VFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELHLRQVMSQSTV 553
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 122/300 (40%), Gaps = 40/300 (13%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ AI + + + GF + + +++L S+C E R ++ELL EM +V
Sbjct: 252 RIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLA---EMNGRERSPSIV 308
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA------- 260
Y +I SL K+ AL ++++M KP Y ++ + +E V+A
Sbjct: 309 TYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPII-ARLCKEGKVEAVVNCLDQ 367
Query: 261 ---------EELFDELLVL---GLVPDVYT----------------YNVYINGLCKQNNV 292
E F+ + VL G V + ++ Y ++ LCK+ N
Sbjct: 368 MIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNT 427
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
++ M + G PD TY++L++ LC L E+ K ++ ++ ++ +
Sbjct: 428 YPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNAL 487
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G + + E + KG + + + G+ A E+L+++ + V
Sbjct: 488 ILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELHLRQV 547
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 136/264 (51%), Gaps = 3/264 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
FR ++ A L MI GF D TC+LIL+++CE + + + + ++M LGF
Sbjct: 228 FRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV--NRAIWYFRKMIDLGFKP 285
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++++T++I L KK + A +L +M +G KP++ +T +++G+ + KA LF
Sbjct: 286 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 265 DELLVLGLV-PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+L+ P+V+TY I G CK++ + + + M+E G P+V TY TL+ CK
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
R EL+ M +G + N+ TY+ ID L K EA LL +A + GL
Sbjct: 406 AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 465
Query: 384 FDETICGLCQRGLVRKALELLKQM 407
+ I C++ + +AL +M
Sbjct: 466 YTILIQEQCKQNDINQALAFFCRM 489
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 8/247 (3%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++ C++ L+ E+L MK+ G + YT +I K A ++N
Sbjct: 360 TYTSMIGGYCKEDKLNRAEML--FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M +G P+I Y ++ + + +A EL ++ GL D TY + I CKQN
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQ 347
++ + M + G + D+ N L+ A C K++E RL +LV + G++ +
Sbjct: 478 DINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL---GLIPTKE 534
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ MI +GDI A G S + I GLC++ +V +A +L + M
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Query: 408 ADKDVSP 414
D+ +SP
Sbjct: 595 IDRGLSP 601
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++R+ + ++ +A+G++ M++ G+ P + VL + AE +FDE+ V G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+VPD +Y + + G + ++ + + M + G PD T +L ALC+ +NR
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
++M G NL ++ +IDGL KG I +A +LEE + G I GL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 392 CQRGLVRKALELLKQMADKDV-SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
C+RG KA L ++ D P + +++ KL+ F R+ +Q L
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 13/253 (5%)
Query: 180 CEQRDLSS----DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
C R+ S +E +G V +M+ G + V+ V+ + A + ++M
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ PD Y +++ G +A+ ++ G +PD T + + LC+ V
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
I M +LG KP++I + +L+ LCK + + E+++EM G N+ T++ +IDG
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 356 LASKGDIIEACGLL-----EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
L +G +A L + + T +SM I G C+ + +A L +M ++
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSM----IGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 411 DVSPGARVWEALL 423
+ P + L+
Sbjct: 388 GLFPNVNTYTTLI 400
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R A E+LN + G DG T ++++ C+Q D+ ++ L F M K GF M
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI--NQALAFFCRMNKTGFEADMR 499
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+I + +++K+ ++ + + S G+ P YT +++ + D A + F +
Sbjct: 500 LNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM 559
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
G VPD +TY I+GLCK++ V+ K+ M + G P +T TL CK
Sbjct: 560 KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 135/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M+ G DG T +L++ C+Q+ +L+ + M G YT +
Sbjct: 295 ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI--FESMPSSGLNPNRFTYTAL 352
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +K+ + +AL I ++M + G+K ++V Y ++ G+ + KA LF+E+L+ G+
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD +TYN+ I+G K +++ +++A M+ P TY+ L+ LC +L + E
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ +M G+ N+ Y +I + A LL+ + G+ ++ I GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ V +A LL M +K + P A + A +
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 138/284 (48%), Gaps = 5/284 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+ N +G ++ M+ D T + ++ + C+ D+ +++ + EM+K C
Sbjct: 218 LKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV--LSEMEKE--CK 273
Query: 205 -GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ Y I L + V +AL + M G+ PD YT++++G Q+ +A+ +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F+ + GL P+ +TY I+G K+ N+E +++ M G K +V+TYN ++ + K
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
E+ + L EM GI + TY+++IDG D+ +AC LL E + L
Sbjct: 394 AGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ I GLC ++KA E+L QM V P ++ L+ + V
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYV 497
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 147/338 (43%), Gaps = 23/338 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P P Y +I L +S + VLD + R + F++ LIK Y R++
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQM-IRNGVKPNVFMYGTLIKAYVQESRYE---- 503
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
AIE+L MI +G D + ++ +C + + ++L + +M
Sbjct: 504 --------------MAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML--LVDM 547
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
+ G Y I K ++ A M S GI P+ V YT+++ G +
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
V+A F +L GL+PD+ Y+ I+ L K + + + + G PDV YN+L
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID--GLASKGDIIEACGLLEEALNK 375
+ CK ++ + +L EM GI N+ Y+ +I+ G G++ EA L +E ++K
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
G+ ++ I G + G + KAL L + K V
Sbjct: 728 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG 765
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 6/295 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGFCFGMVDYTN 211
A+ + N M+ G D T +L++ + D++ ELL EMK Y+
Sbjct: 400 AMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLA---EMKARKLTPSPFTYSV 456
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L + A +L+QM +G+KP++ Y ++ + + Y A EL ++ G
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
++PD++ YN I GLC+ VE ++ M E G KP+ TY + K E+
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAE 576
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
K+M GIV N Y+I+I G G+ +EA + L KGL + I L
Sbjct: 577 RYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSL 636
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ G ++A+ + + V P ++ +L+ + D S +L D++L+
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS--QLYDEMLH 689
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 10/300 (3%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
+AH + +NL+ K + ++ A M++ G + ++++ C+ + +
Sbjct: 555 NAHTYGAFINLYSKSGEIQV-----AERYFKDMLSSGIVPNNVIYTILIKGHCDVGN--T 607
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
E L + M + G + Y+ +I SL K K +A+G+ + G+ PD+ Y +
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN--GLCKQNNVEAGIKMIACMEEL 305
++G + D KA +L+DE+L G+ P++ YN IN G CK N+ K+ M
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G PD Y L+ K L + L E + K V +L ++ +ID G +IEA
Sbjct: 728 GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEA 786
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L ++ ++K L + I + ++ +A +L M +++ P + +LLLS
Sbjct: 787 RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 846
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 125/254 (49%), Gaps = 4/254 (1%)
Query: 171 TCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T S+++S +C DL ++E+L +M + G + Y +I++ V++ + A+ +L
Sbjct: 453 TYSVLISGLCHSSDLQKANEVL---DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M ++G+ PD+ CY ++ G+ + +A+ L ++ G+ P+ +TY +IN K
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
++ + M G P+ + Y L++ C V K M KG++ +++ Y
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
S +I L+ G EA G+ + L G+ +++ I G C+ G + KA +L +M
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689
Query: 410 KDVSPGARVWEALL 423
++P V+ L+
Sbjct: 690 NGINPNIVVYNTLI 703
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT ++ K+++ +A I M S G+ P+ YT +++G I + + +A + DE++
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL +V TYN I G+ K + + + M G +PD TYN L+ K ++
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMA 433
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ EL+ EMK + + + TYS++I GL D+ +A +L++ + G+ M+ I
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLI 493
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
Q A+ELLK M V P + L++
Sbjct: 494 KAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 8/241 (3%)
Query: 190 LLGFVQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
+LGF+ E + GF ++ N++R L+K + + M I PD+
Sbjct: 184 VLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVY 243
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
YT V+ D +K + + E + P+++TYN +I GLC+ V+ +++ M
Sbjct: 244 TYTNVIKAHCKVGDVIKGKMVLSE-MEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLM 302
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E G PD TY L+ CK + + + + M G+ N TY+ +IDG +G+I
Sbjct: 303 MEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNI 362
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
EA + +E + +GL ++ I G+ + G + KA+ L +M + P + L
Sbjct: 363 EEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLL 422
Query: 423 L 423
+
Sbjct: 423 I 423
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 153/350 (43%), Gaps = 24/350 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSV 136
P AY +I +L++N + + V ++ + P+ F++ LI + + +
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681
Query: 137 NLFYKIPKFRINRVGFAIEILNCMIND-GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
L+ ++ IN I + N +IND G+C G E
Sbjct: 682 QLYDEMLHNGINP---NIVVYNTLINDYGYCKSGNLT----------------EAFKLFD 722
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM G Y +I K+ + AL + ++ + + + + +++
Sbjct: 723 EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHG 781
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
++A ELFD+++ L P++ TY + I+ K +E ++ ME P+ +TY
Sbjct: 782 KVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYT 841
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+LL + ++ ++ L K+M+ +GI + Y +M +G +EA LL ++L +
Sbjct: 842 SLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVE 901
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
G+ + +FD I LC+ + LELL +M +++S ++ LLL
Sbjct: 902 GIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 951
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 146/286 (51%), Gaps = 12/286 (4%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+NRV A+ + ++ G+ + T + ++ +C + +S E M+KLG
Sbjct: 138 NVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRIS--EATRLFLRMQKLGCTPN 195
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDG------IKPDIVCYTMVLNGV--IVQEDY 257
V Y +I+ L + V AL + +M +D KP ++ Y+++++G+ + +ED
Sbjct: 196 AVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED- 254
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A+ELF+E+ G++PDV +Y+ I+G C + + M + G +PD++T++ L
Sbjct: 255 -EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LCK ++ ++L++ M +GIV NL TY+ +IDG GD+ A L +KGL
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G C+ V++A+ L +M SP + LL
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLL 419
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 118/219 (53%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G++ Y+ +I L K + +A + +MK+ G+ PD++ Y+ +++G + +++ LF
Sbjct: 236 GVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLF 295
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE++ G+ PD+ T++V I+ LCK+ V K++ M + G P++ITYN+L+ C V
Sbjct: 296 DEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMV 355
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+LN REL M KG+ + +Y+ +I+G + EA L E L G + +
Sbjct: 356 GDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTY 415
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GL Q+G V A +L M VS ++++ L
Sbjct: 416 GTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 18/279 (6%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GFC GK D+ EM G MV ++ +I +L K+ KV
Sbjct: 281 GFCCAGKW----------------DQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVT 324
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A +L M GI P+++ Y +++G + D A ELF + GL PD +Y I
Sbjct: 325 EAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLI 384
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
NG CK V+ + + M ++G P+V TY TLL+ L + ++ ++L MK G+
Sbjct: 385 NGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVS 444
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N Q Y I +DGL + EA L E + + I GLC+ G + A EL
Sbjct: 445 ANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWEL 504
Query: 404 LKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
++++ + + P + ++ V ++D N F ++
Sbjct: 505 FEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKM 543
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 6/242 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+L EM+ G + + + L +V +AL + + G P++V YT +
Sbjct: 108 SQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTL 167
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI------AC 301
+ G+ ++ +A LF + LG P+ TY I GLC+ NV +K+ A
Sbjct: 168 IKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDAS 227
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
+ KP VITY+ ++ LCKV + +EL +EMK +G++ ++ +YS +I G G
Sbjct: 228 QYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGK 287
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
++ L +E +++G+ F I LC+ G V +A +LL+ M + + P + +
Sbjct: 288 WDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNS 347
Query: 422 LL 423
L+
Sbjct: 348 LI 349
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 2/268 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A ++L MI G + T + ++ C DL+S L M G +
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL--FLSMPSKGLEPDEIS 379
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +I K KV +A+ + N+M G P++ Y +L G+ + A++LF +
Sbjct: 380 YTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMK 439
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ + Y ++++GLCK + + +++ ++ K ++ Y+ L+ LCK +L
Sbjct: 440 TYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLE 499
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL +++ +G+ ++ TY+IMI G G + A L E+ G ++ +
Sbjct: 500 TAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLL 559
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGA 416
CG C+ + + ++LL +M KDVSP A
Sbjct: 560 CGFCEGNKLEEVIKLLHKMVQKDVSPNA 587
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M+S I P I + +L G+ Y + L++E+ + GL PD++T ++ N LC N
Sbjct: 83 MRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
V + +A + G P+V+TY TL++ LC ++ L M+ G N TY
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201
Query: 352 MIDGLASKGDIIEACGLLEEALN----------KGLCTQSSMFDETICGLCQRGLVRKAL 401
+I GL G++ A L +E LN G+ T S + D GLC+ G +A
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIID----GLCKVGREDEAK 257
Query: 402 ELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
EL ++M + + P + L+ K D F +VDQ
Sbjct: 258 ELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ 301
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
++A FD ++ +P + ++N + GL K N+ + M G PD+ T + L
Sbjct: 73 IQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSIL 132
Query: 318 LQALCKVRELNRLRELVKEMKW---KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
LC V NR+ E + M +G + N+ TY+ +I GL + I EA L
Sbjct: 133 ANCLCNV---NRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQK 189
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
G + + I GLCQ G V AL+L K+M + G ++ S+
Sbjct: 190 LGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSI 242
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L+S+ + + S+ LL +M G + +I S +V A +L ++
Sbjct: 67 LLTSIAKMKHHST--LLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILK 124
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +PD +T ++ G+ V+ +A LFD+++ G PDV TY INGLCK N A
Sbjct: 125 LGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSA 184
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
I+++ M + +P+V YNT++ +LCK R++ L EM KGI ++ TY+ +I
Sbjct: 185 AIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIH 244
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + + LL E ++ + F+ + LC+ G V +A +++ +M + V P
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304
Query: 415 GARVWEALL 423
+ AL+
Sbjct: 305 NVVTYTALM 313
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 112/225 (49%)
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
KLG +T +IR + + K+ +AL + ++M +G +PD+V Y ++NG+ +
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
A L ++ P+V+ YN I+ LCK V + + M G PD+ TYN+L+
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
ALC + E + L+ EM I+ ++ +++ ++D L +G + EA ++++ + +G+
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G C + +A+++ M K P + L+
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 110/232 (47%)
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L+ DE + M G ++ Y +I K +++ A+ + +M + PD V Y
Sbjct: 374 LNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTY 433
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+ +++G+ E A LF E++ +P++ TY + ++ LCK + + ++ +E
Sbjct: 434 STLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEG 493
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
PD+ N + +C+ EL R+L + KG+ ++ TYSIMI+GL +G + E
Sbjct: 494 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDE 553
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
A L E G +++ G + +A++LL++M + S A
Sbjct: 554 ASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADA 605
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 182/441 (41%), Gaps = 46/441 (10%)
Query: 26 KAKWHQTLDQQQAKQNVKQSLTTPPT-----KQQQQIPKQPH--ILSSLLHSFSIYNCEP 78
K+ T+D + N + PP+ K I K H L SL H + P
Sbjct: 35 KSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP 94
Query: 79 PPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNL 138
H +I + ++ SVL I K + + F LI+ + ++++L
Sbjct: 95 NIYTLHILINSFCHLNRVGFAFSVLAKILKLGH-QPDTATFTTLIRGICVEGKIGEALHL 153
Query: 139 FYKI--PKFRINRVGF---------------AIEILNCMINDGFCVDGKTCSLILSSVCE 181
F K+ FR + V + AI +L M+ + + I+ S+C+
Sbjct: 154 FDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK 213
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
R ++ E EM G + Y ++I +L + +LN+M I PD+
Sbjct: 214 DRQVT--EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 271
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V + V++ + + +A ++ D+++ G+ P+V TY ++G C + ++ +K+
Sbjct: 272 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDT 331
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNR----------------LRELVK---EMKWKGI 342
M G P+VI+YNTL+ CK++ +++ + E VK M KG
Sbjct: 332 MVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGC 391
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ N+ +Y+ +I+G I +A L E + L + + I GLC ++ A+
Sbjct: 392 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 451
Query: 403 LLKQMADKDVSPGARVWEALL 423
L +M P + LL
Sbjct: 452 LFHEMVACSQIPNLVTYRILL 472
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 161/376 (42%), Gaps = 50/376 (13%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S NC+P AY+ +I +L ++ Q + ++ + + F + LI
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK-GISPDIFTYNSLIHAL 246
Query: 127 ADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ ++ L ++ +I + V F + D C +GK V E D
Sbjct: 247 CNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV------DALCKEGK--------VTEAHD 292
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ V +M + G +V YT ++ ++ +A+ + + M G P+++ Y
Sbjct: 293 V--------VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344
Query: 245 TMVLNGV--IVQED--------------YVKAEE---LFDELLVLGLVPDVYTYNVYING 285
++NG I + D Y+ +E +FD ++ G +P+V +YN ING
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404
Query: 286 LCKQNNVEAGIKMIA--CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
CK ++ + + C +EL PD +TY+TL+ LC V L L EM +
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQEL--IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 462
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
NL TY I++D L + EA LL+ L + + I G+C+ G + A +L
Sbjct: 463 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 522
Query: 404 LKQMADKDVSPGARVW 419
++ K + P VW
Sbjct: 523 FSNLSSKGLQPD--VW 536
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ + M+ G + + + +++ C+ + + D+ + EM + V Y+ +
Sbjct: 379 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRI--DKAMYLFGEMCRQELIPDTVTYSTL 436
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L E++ DA+ + ++M + P++V Y ++L+ + +A L + L
Sbjct: 437 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 496
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ N+ I+G+C+ +EA + + + G +PDV TY+ ++ LC+ L+ +
Sbjct: 497 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 556
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +EM G LN Y+ + G + A LL+E + +G +S + L
Sbjct: 557 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 616
Query: 393 QRGLVRKALELLKQ 406
GL + ++L+
Sbjct: 617 DDGLDQSLKQILRN 630
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 180/402 (44%), Gaps = 28/402 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKT 125
L+ C P + +I L N F + V H + E+ P+ ++ +I
Sbjct: 239 LMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEV--HAQMAEHGCAPDVRMYATIIDG 296
Query: 126 YADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVD 168
R + + + ++P + + +R A +L M + +D
Sbjct: 297 VCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLD 356
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T ++++ +C+ + D ++ +++M + G ++ YT VI K+ + +A+ +
Sbjct: 357 DVTFNILVDFLCQNGLV--DRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML 414
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L M + G +P+ V YT+VL G+ E +V AEEL +++ G P+ T+N IN LCK
Sbjct: 415 LRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 474
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ VE I+++ M G PD+I+Y+T++ L K + EL+ M KG+ N
Sbjct: 475 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTII 534
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
YS + L+ +G I + + E + + + + +++ I LC+RG +A+E L M
Sbjct: 535 YSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMV 594
Query: 409 DKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
P + L+ S+ F++ +IL C
Sbjct: 595 SSGCVPNESTYTILIRGLASE------GFVKEAQEILTELCS 630
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 167/368 (45%), Gaps = 23/368 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE-NFETPEFIFIDLIK 124
++L + C P P YH ++ S F VL + R + + ++
Sbjct: 132 AVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLV--LQ 189
Query: 125 TYADAHRFQDSVNLFYKI-PKF-----------------RINRVGFAIEILNCMINDGFC 166
D ++V L + P F R G +++ M+ G
Sbjct: 190 AVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCP 249
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
+ T S ++ +C R+ + + +M + G + Y +I + K+E++ A
Sbjct: 250 PNIVTFSTLIGHLC--RNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVAR 307
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
GILN+M S G+ P++VCY +L G+ + + +AE L E+ D T+N+ ++ L
Sbjct: 308 GILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFL 367
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C+ V+ I+++ M E G PDVITY T++ CK ++ L++ M G N
Sbjct: 368 CQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNT 427
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+Y+I++ GL S ++A L+ + + +G F+ I LC++GLV +A+ELLKQ
Sbjct: 428 VSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQ 487
Query: 407 MADKDVSP 414
M SP
Sbjct: 488 MLVNGCSP 495
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 167/373 (44%), Gaps = 26/373 (6%)
Query: 80 PEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AY + +++ L + D +VLD + +R TP + L + A F+ +V
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTL-EAACRASGFRGAVG 167
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE- 196
+ ++ G A+++ N C+L+L +VC+Q + DE + +++
Sbjct: 168 VLRD-----LHGRGCALDVGN-------------CNLVLQAVCDQGPV--DEAVRLLRDL 207
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G +V Y V+R L + ++ +M + G P+IV ++ ++ +
Sbjct: 208 LPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGL 267
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ + E+ ++ G PDV Y I+G+CK+ +E ++ M G P+V+ YNT
Sbjct: 268 FERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNT 327
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL+ LC L+ EM K L+ T++I++D L G + +LE+ L G
Sbjct: 328 LLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHG 387
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ I G C+ GL+ +A+ LL+ MA P + +L S +V+
Sbjct: 388 CMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAE 447
Query: 437 FIRLVDQILNTPC 449
L+ Q++ C
Sbjct: 448 --ELMSQMIQQGC 458
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 155/366 (42%), Gaps = 72/366 (19%)
Query: 81 EAYHFVIKTLAENSQFCDI---SSVLDHIEKRENFETPEFI---------------FIDL 122
E H V +AE+ D+ ++++D + K E E I + L
Sbjct: 269 ERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTL 328
Query: 123 IKTYADAHRFQDSVNLFYKI---------PKFRI--------NRVGFAIEILNCMINDGF 165
+K A R++++ L ++ F I V IE+L M+ G
Sbjct: 329 LKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGC 388
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
D T + +++ C++ + DE + ++ M G V YT V++ L E+ DA
Sbjct: 389 MPDVITYTTVINGFCKEGLI--DEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDA 446
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+++QM G P+ V + ++N + + +A EL ++LV G PD+ +Y+ I+G
Sbjct: 447 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 506
Query: 286 LCKQNNVEAGIKMIACMEELGSKP-----------------------------------D 310
L K N + ++++ M + G P D
Sbjct: 507 LGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSD 566
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+ YN ++ +LCK E +R E + M G V N TY+I+I GLAS+G + EA +L
Sbjct: 567 AVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILT 626
Query: 371 EALNKG 376
E +KG
Sbjct: 627 ELCSKG 632
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 36/188 (19%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ YTY + LC + + + ++ M G P Y+ L+A C+
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE---------------ALNKG 376
+++++ +G L++ ++++ + +G + EA LL + A+ +G
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 377 LC-------TQSSM--------------FDETICGLCQRGLVRKALELLKQMADKDVSPG 415
LC Q M F I LC+ GL + E+ QMA+ +P
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 416 ARVWEALL 423
R++ ++
Sbjct: 287 VRMYATII 294
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 124/235 (52%), Gaps = 3/235 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
N VG A+E+ + M+++G D ++S + + L D+ MKK GF
Sbjct: 329 LHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRL--DDAWSMATSMKKAGFQL 386
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
Y +I +++++ +A +L +MK G++PD+ Y +L+G+ D++ +EL
Sbjct: 387 DAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELL 446
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ G P V T+ I+G CK ++ +++ M+E G +P+ + YNTL+ LCK
Sbjct: 447 GKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKS 506
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
R+ + EL EM+ K + N+ T++ ++ GL K ++ E L + + +G CT
Sbjct: 507 RDTSLAIELFDEMREKHVPANVTTFNALLKGLRDK-NMPEKAFELMDLMREGRCT 560
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 184/474 (38%), Gaps = 80/474 (16%)
Query: 17 HRKWPLSP-------YKAKWHQTLDQQQAKQNVKQSLTT--PPT------------KQQQ 55
HR P SP YK A + ++ SL PP Q
Sbjct: 92 HRLPPPSPRILSALLYKILSRSPSSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAG 151
Query: 56 QIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETP 115
+P + +S+ + + P Y ++K L + + D SVLD + E+ P
Sbjct: 152 DLPGMTQLFASMRDA----SVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCP 207
Query: 116 EFIFID-LIKTYADAHRFQDSVNLFYK--------IPKF-----------RINRVGFAIE 155
+ + ++ ++ R Q +V + P R VG A E
Sbjct: 208 DVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACE 267
Query: 156 ILNCMINDGFCVDGKTCSLILSSVC-------------EQRDL---------SSDELLGF 193
++ M + + T + I+ +C E+R + + L+G
Sbjct: 268 LVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGA 327
Query: 194 VQEMKKLGFCFG----MVD---------YTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+G MVD Y +I L + ++ DA + MK G + D
Sbjct: 328 FLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLD 387
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
Y +++ G ++ +A EL E+ GL PDVYTYN ++GLCK + A +++
Sbjct: 388 AKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLG 447
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M + G +P V+T+ TL+ CKV +++ + + M GI N Y+ +ID L
Sbjct: 448 KMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSR 507
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
D A L +E K + + F+ + GL + + KA EL+ M + +P
Sbjct: 508 DTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTP 561
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 4/192 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD-LSSDELLGFVQEMKKLGFCF 204
R R+ A E+L M G D T + +LS +C+ D L+ DELLG +M G
Sbjct: 400 RRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLG---KMIDGGCRP 456
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V + +I K ++ +AL I M GI+P+ V Y +++ + D A ELF
Sbjct: 457 SVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELF 516
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+ + +V T+N + GL +N E +++ M E PD +T + L++ L +
Sbjct: 517 DEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVI 576
Query: 325 RELNRLRELVKE 336
E +RL+ ++
Sbjct: 577 GETDRLKHFMQH 588
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 114/286 (39%), Gaps = 43/286 (15%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKS--DGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y +++ L K +V DAL +L+ M + PD+V +++G+ +A +
Sbjct: 172 VVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKF 231
Query: 264 FDELL--VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT-------- 313
+E + V G P+ TYN + C+ NV +++A ME+ P+ +T
Sbjct: 232 VEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGL 291
Query: 314 -----------------------------YNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
Y+TL+ A + EL EM +G
Sbjct: 292 CWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSP 351
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ Y MI GL G + +A + G + ++ I G C+R + +A ELL
Sbjct: 352 DAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELL 411
Query: 405 KQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
+M + + P + LL DF+ L+ ++++ C+
Sbjct: 412 GEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVD--ELLGKMIDGGCR 455
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+ + + PD + +L+ + D +LF + + P+V TY + + GLCK
Sbjct: 126 DSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKA 185
Query: 290 NNVEAGIKMIACMEELGSK--PDVITYNTLLQALCKVRELNRLRELVKE--MKWKGIVLN 345
V + ++ M S PDV+ N ++ LCK L + + V+E G N
Sbjct: 186 GRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPN 245
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
TY+ + G++ AC L+ + + + + + + GLC G V ALE +
Sbjct: 246 TVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFR 305
Query: 406 QMADKDVSPGAR 417
+ + V P AR
Sbjct: 306 E--KRTVWPEAR 315
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A L D L PD +N ++ L + ++ ++ A M + +P+V+TY L++
Sbjct: 121 ARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVK 180
Query: 320 ALCKVRELNRLRELVKEMKW--KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK-- 375
LCK + ++ M + ++ + ++DGL G + +A +EE +
Sbjct: 181 GLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVH 240
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G + ++ C+ G V A EL+ +M + V+P A
Sbjct: 241 GCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNA 281
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 138/268 (51%), Gaps = 2/268 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ +LN M + + +T + ++ +C +D + + M K +V Y ++
Sbjct: 107 AVGLLNQMTSKTVTPNIRTFTTLVDGLC--KDGEVKKARNVLAIMIKQRVEPNIVTYNSL 164
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ ++V A + N + G+ P++ Y +++NG+ + +A LF E+ +
Sbjct: 165 MDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNM 224
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPD YN I+GLCK + I M + G ++ITYN+LL LCK ++++
Sbjct: 225 VPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAIT 284
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ ++K +GI N+ TY+I++DGL G + +A + ++ LNKG + ++ I GLC
Sbjct: 285 LLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLC 344
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWE 420
+ G + +AL LL +M D +P +E
Sbjct: 345 KEGFLDEALSLLSKMEDNKCTPDGVTYE 372
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 112/246 (45%), Gaps = 53/246 (21%)
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE--ELFDELLVLGLVPDVYTYN------ 280
LN ++ +KPD+V Y +++ I+ +D + ++ +L+ E++ + PDV TYN
Sbjct: 27 LNHIERLLVKPDVVMYNTIID--ILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSL 84
Query: 281 ---VYI----------------------------------------NGLCKQNNVEAGIK 297
VYI +GLCK V+
Sbjct: 85 LNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARN 144
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++A M + +P+++TYN+L+ V+E+N+ ++L + +G+ N+++Y +MI+GL
Sbjct: 145 VLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLC 204
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ EA L +E +K + + ++ I GLC+ + + + +M D+
Sbjct: 205 KNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANII 264
Query: 418 VWEALL 423
+ +LL
Sbjct: 265 TYNSLL 270
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ +C+ R + ++ F+ EM G ++ Y +++ L K +V A+ +L ++K+
Sbjct: 234 LIDGLCKSRRIY--DVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKN 291
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
GI+P+I YT++++G+ A+E++ +LL G D Y V INGLCK+ ++
Sbjct: 292 QGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDE 351
Query: 295 GIKMIACMEELGSKPDVITYNTLLQAL 321
+ +++ ME+ PD +TY ++AL
Sbjct: 352 ALSLLSKMEDNKCTPDGVTYEITIRAL 378
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + V A ++ N + G + ++ ++++ +C+ + + DE +EM
Sbjct: 169 FLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMV--DEAANLFKEMHSKNMVP 226
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y ++I L K +++D + +M G +I+ Y +L+G+ KA L
Sbjct: 227 DTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLL 286
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G+ P++YTY + ++GLCK + ++ + G + D Y ++ LCK
Sbjct: 287 TKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKE 346
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
L+ L+ +M+ + TY I I L
Sbjct: 347 GFLDEALSLLSKMEDNKCTPDGVTYEITIRAL 378
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 147/309 (47%), Gaps = 8/309 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + A L +I G+ T S +L +C + +SD + ++ M LG
Sbjct: 108 RAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKR-TSDAMDIALRRMPALGCTPN 166
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSD----GIKPDIVCYTMVLNGVIVQEDYVKAE 261
Y +++ L + + AL +L+ M +D G PD+V YT V+NG++ + KA
Sbjct: 167 AFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAY 226
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
LFDE+L G+ P+ TYN ++G C + I + M G +PDV+TYNTL+ L
Sbjct: 227 CLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYL 286
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK R++ M KG + Y ++ G A++G +++ LL+ + G
Sbjct: 287 CKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDH 346
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIR 439
+F+ I + G+V +A+ +M + + P + ++ L V K+D + F R
Sbjct: 347 YIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDR 406
Query: 440 LVDQILNTP 448
L+ + L TP
Sbjct: 407 LISEGL-TP 414
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 129/249 (51%), Gaps = 2/249 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++L+ M+ +G D ++++ + + + + +L F +M++ G +V Y V+
Sbjct: 332 QLLDVMVRNGTQPDHYIFNILIGAYAKH-GMVDEAMLAF-SKMRQQGLHPNIVTYGTVMD 389
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L + KV DA+ +++ S+G+ P+ V + +++G+ + + KAEEL E++ G+ P
Sbjct: 390 ALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP 449
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ +N +N LCK+ V + M + + DVITY TL+ C +++ +L+
Sbjct: 450 NTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLL 509
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+ M G+ N TY+ +I+G G I +AC L + +KG+ ++ + GL Q
Sbjct: 510 EGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQT 569
Query: 395 GLVRKALEL 403
+ A EL
Sbjct: 570 RRIAAAKEL 578
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 161/380 (42%), Gaps = 22/380 (5%)
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
H+L +++ + C P +Y VI L Q + D E + +P I +
Sbjct: 188 HLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFD--EMLDQGMSPNCITYN 245
Query: 122 -LIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMIND 163
L+ Y + + ++++ +F K+ + + R A ++ + M+
Sbjct: 246 CLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKK 305
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G D +L + L ++ + M + G + +I + K V
Sbjct: 306 GHKPDSSIYGTLLHGYATEGYLV--QMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVD 363
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A+ ++M+ G+ P+IV Y V++ + A FD L+ GL P+ + I
Sbjct: 364 EAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLI 423
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+GLC + + ++ M G P+ I +NTLL LCK + R + + M +
Sbjct: 424 HGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQ 483
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ TY+ +IDG G + EA LLE + G+ ++ I G C+ G + A L
Sbjct: 484 CDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSL 543
Query: 404 LKQMADKDVSPGARVWEALL 423
+QMA K V+PG ++ +L
Sbjct: 544 FRQMASKGVNPGIVIYSTIL 563
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 17/270 (6%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+C+DGK DE ++ M G V Y +I K ++
Sbjct: 494 DGYCLDGKV----------------DEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRI 537
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DA + QM S G+ P IV Y+ +L+G+ A+EL+ ++ G+ + TYN+
Sbjct: 538 EDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNII 597
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
+ GLC+ N + ++M + + T+N ++ AL K + ++L + +G+
Sbjct: 598 LQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGL 657
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
V N+ TY +M+ L +G + E L G S M + + L Q+G VRKA
Sbjct: 658 VPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGV 717
Query: 403 LLKQMADKDVSPGARVWEALL-LSSVSKLD 431
L ++ + + S A E+L+ L S K D
Sbjct: 718 YLSKIDENNFSLEASTAESLVFLVSSGKYD 747
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 153/370 (41%), Gaps = 20/370 (5%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y ++ A + +LD + R + +IF LI YA +++
Sbjct: 308 KPDSSIYGTLLHGYATEGYLVQMHQLLD-VMVRNGTQPDHYIFNILIGAYAKHGMVDEAM 366
Query: 137 NLFYKI------PKF-----------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
F K+ P R+ +V A+ + +I++G +G ++ +
Sbjct: 367 LAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGL 426
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C E L EM G C + + ++ L K+ V A I + M ++
Sbjct: 427 CACDKWDKAEELAV--EMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQC 484
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D++ YT +++G + +A +L + +++ G+ P+ TYN ING CK +E +
Sbjct: 485 DVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLF 544
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M G P ++ Y+T+L L + R + +EL M GI L + TY+I++ GL
Sbjct: 545 RQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQN 604
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+A + Q+ F+ I L + G +A +L + + + P +
Sbjct: 605 NCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 664
Query: 420 EALLLSSVSK 429
++ S + +
Sbjct: 665 WLMMKSLIEQ 674
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 127/280 (45%), Gaps = 6/280 (2%)
Query: 148 NRVGFAIEILNCMIND---GFCV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
NR A+ +L+ M+ D G C D + + +++ + + L D+ EM G
Sbjct: 181 NRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQL--DKAYCLFDEMLDQGMS 238
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ Y ++ K +A+GI +M DG++PD+V Y ++ + ++A ++
Sbjct: 239 PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKV 298
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
FD ++ G PD Y ++G + + +++ M G++PD +N L+ A K
Sbjct: 299 FDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAK 358
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
++ +M+ +G+ N+ TY ++D L G + +A + +++GL +
Sbjct: 359 HGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVV 418
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F I GLC KA EL +M + + P + LL
Sbjct: 419 FRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLL 458
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL- 333
D+ TY++ I + +++ + + G IT++ LL+ LC + + ++
Sbjct: 95 DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL---NKGLCTQSSM-FDETIC 389
++ M G N +Y+I++ GL + +A LL + +G C + + I
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + G + KA L +M D+ +SP + LL
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLL 248
>gi|255555093|ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542429|gb|EEF43971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 172/376 (45%), Gaps = 29/376 (7%)
Query: 40 QNVKQSLTTPPTKQQQQIP-----KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENS 94
+ ++ TP T IP + L L+ + + P A H T+
Sbjct: 6 RRLRTIFNTPKTTSTATIPPSTVNTKERKLQKLVQRYKRSSESPEFRARHRFYSTIVRRL 65
Query: 95 QFC-DISSVLDHIEKRENFE--TPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVG 151
F S V D +E ++NF T E I LI Y A + LF ++P + R
Sbjct: 66 SFAKQFSMVEDFLEHQKNFADITNEQFTIRLISLYGKAGMLDHAHRLFDEMPDLKCTR-- 123
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLGFCFGMVDYT 210
+ N +++ C+D D++ GF+++ KLG +V +
Sbjct: 124 -TVRSFNALLSA--CIDSGKF---------------DKVQGFLRDFPVKLGITPDVVSFN 165
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
VI+ + + + +L +M+ GI+PD++ + +LNG +V E+++ +
Sbjct: 166 IVIKGYCEIGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGFYGNGRFVDGEKIWTLMESK 225
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
+VP+V +YN + GL +N V ++++ ME G +PDV++YN +++ LC + +
Sbjct: 226 NVVPNVRSYNSRLRGLELENRVMEAVELLGEMENKGIRPDVMSYNAVIKGLCNDENVEEV 285
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ +++K G + + TY +I L KGD+ A L E +NKGL +++F +
Sbjct: 286 KNWYRKLKENGRMPDRVTYMTLIPYLRQKGDLDGAVELCIEIMNKGLLVNATLFQHVVDE 345
Query: 391 LCQRGLVRKALELLKQ 406
L + V +A +L+++
Sbjct: 346 LVKLSRVEEAKDLVER 361
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 239 PDIVC------YTMVLNGVIVQEDYVKAEELFDELLV-LGLVPDVYTYNVYINGLCKQNN 291
PD+ C + +L+ I + K + + V LG+ PDV ++N+ I G C+ N
Sbjct: 117 PDLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVKLGITPDVVSFNIVIKGYCEIGN 176
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+++G+ ++ ME+ G +PD+IT+NTLL ++ M+ K +V N+++Y+
Sbjct: 177 LDSGVLVLCEMEKRGIEPDLITFNTLLNGFYGNGRFVDGEKIWTLMESKNVVPNVRSYNS 236
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+ GL + ++EA LL E NKG+ ++ I GLC V + +++ +
Sbjct: 237 RLRGLELENRVMEAVELLGEMENKGIRPDVMSYNAVIKGLCNDENVEEVKNWYRKLKENG 296
Query: 412 VSPGARVWEALL 423
P + L+
Sbjct: 297 RMPDRVTYMTLI 308
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLC---KQNNVEAGIKMIACMEELGSKPDVITYNT 316
A LFDE+ L V ++N ++ K + V+ ++ +LG PDV+++N
Sbjct: 109 AHRLFDEMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPV--KLGITPDVVSFNI 166
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+++ C++ L+ ++ EM+ +GI +L T++ +++G G ++ + +K
Sbjct: 167 VIKGYCEIGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGFYGNGRFVDGEKIWTLMESKN 226
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ + GL V +A+ELL +M +K + P + A++
Sbjct: 227 VVPNVRSYNSRLRGLELENRVMEAVELLGEMENKGIRPDVMSYNAVI 273
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 169/349 (48%), Gaps = 21/349 (6%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLF--------------YKIPKFRINRVGFAIEILNCM- 160
E + +LI + +A R +++ LF Y + F + ++G E LN
Sbjct: 274 EVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFK 333
Query: 161 -INDGFC-VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
+ + C + T ++++ S+CE D + D+ + M + G +V Y +I K
Sbjct: 334 EMTEKHCQPNVHTYTVLICSLCE--DSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCK 391
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
K AL IL+ M+S+ P+ Y ++ G ++ KA L ++L L P+V T
Sbjct: 392 KGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVT 451
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN+ I+G CK+ ++ + K+++ M E G PD TY+ + LCK + R L + +K
Sbjct: 452 YNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLK 511
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KGI N YS +IDG G + + LL++ L+ G S ++ I G C+ +
Sbjct: 512 EKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFK 571
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
+A L+ M +D+ P A + +L+ ++ K D + + + DQ+L+T
Sbjct: 572 EARLLVDIMIKRDIEPAADTY-TILIDNLLKDDEFDQAH-DMFDQMLST 618
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 135/325 (41%), Gaps = 39/325 (12%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
++ G +D T + ++ C +++ D M G V YTN+I +
Sbjct: 230 IVQAGLSLDTFTYTSLILGYCRNKNV--DAANAIFLSMPNKGCLRNEVSYTNLIHGFCEA 287
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +AL + +QM D P + YT+++ + +A +F E+ P+V+TY
Sbjct: 288 RRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTY 347
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK---------------- 323
V I LC+ +N + K++ M E G P V+TYN L+ CK
Sbjct: 348 TVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMES 407
Query: 324 ------VRELNRL-------------RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
R N L L+ +M + + N+ TY+I+I G +GD+
Sbjct: 408 NNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGS 467
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A LL GL + I LC+RGLV +A L + + +K + ++ L+
Sbjct: 468 AYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLID 527
Query: 425 SSVSKLDFVNTSFIRLVDQILNTPC 449
+ F L+D++L+ C
Sbjct: 528 GYCKVGKVSDGRF--LLDKMLSAGC 550
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 28/272 (10%)
Query: 163 DGFCVDGKTCS------LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
DG+C G + S L+ S+ C + +EL+ LGFC G
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELI--------LGFCRG----------- 427
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
+ + A+ +L++M ++P++V Y ++++G + D A +L + GLVPD
Sbjct: 428 ---KNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDE 484
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
+TY+V+I+ LCK+ VE + ++E G K + + Y+TL+ CKV +++ R L+ +
Sbjct: 485 WTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDK 544
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M G V N TY+ +IDG + + EA L++ + + + + + I L +
Sbjct: 545 MLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDE 604
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVS 428
+A ++ QM P ++ A + + S
Sbjct: 605 FDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS 636
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++D + T + +++ C+ ++ EL +V ++ + G YT++I +
Sbjct: 195 MLDDMVTPNIFTLNTMVNGYCKLGNVVEAEL--YVSKIVQAGLSLDTFTYTSLILGYCRN 252
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ V A I M + G + V YT +++G +A +LF ++ P V TY
Sbjct: 253 KNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTY 312
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
V I LC+ + M M E +P+V TY L+ +LC+ + ++++ M
Sbjct: 313 TVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLE 372
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG++ ++ TY+ +IDG KG A +L + + ++E I G C+ + K
Sbjct: 373 KGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHK 432
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A+ LL +M ++ + P + L+
Sbjct: 433 AMSLLHKMLERKLQPNVVTYNILI 456
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ K V +A ++++ G+ D YT ++ G ++ A +F + G
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ + +Y I+G C+ V+ +K+ + M E P V TY ++ ALC++
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL 329
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ KEM K N+ TY+++I L + +A +L L KGL ++ I G
Sbjct: 330 NMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGY 389
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C++GL ALE+L M + SP AR + L+L
Sbjct: 390 CKKGLSASALEILSLMESNNCSPNARTYNELILG 423
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 2/222 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+G A ++L+ M G D T S+ + ++C +R L +E + +K+ G V Y
Sbjct: 465 LGSAYKLLSLMNESGLVPDEWTYSVFIDTLC-KRGLV-EEARSLFESLKEKGIKANEVIY 522
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ +I K KV D +L++M S G P+ + Y +++G ++++ +A L D ++
Sbjct: 523 STLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIK 582
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ P TY + I+ L K + + M M GS PDV Y + A C L
Sbjct: 583 RDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKD 642
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
L+ +M KGI+ + Y++ ID G I A G+L+
Sbjct: 643 AEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKR 684
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 156/367 (42%), Gaps = 22/367 (5%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
+C+P Y +I +L E+S F D +L+ + E P + + LI Y
Sbjct: 339 HCQPNVHTYTVLICSLCEDSNFDDAKKILNGM--LEKGLIPSVVTYNALIDGYCKKGLSA 396
Query: 134 DSVNLFYKI------PKFRINR---VGF--------AIEILNCMINDGFCVDGKTCSLIL 176
++ + + P R +GF A+ +L+ M+ + T ++++
Sbjct: 397 SALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILI 456
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
C++ DL S L + M + G Y+ I +L K+ V +A + +K G
Sbjct: 457 HGQCKEGDLGSAYKL--LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
IK + V Y+ +++G L D++L G VP+ TYN I+G CK+ N +
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + +P TY L+ L K E ++ ++ +M G ++ Y+ I
Sbjct: 575 LLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAY 634
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
S G + +A L+ + KG+ + ++ I + G + A +LK+M + P
Sbjct: 635 CSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSY 694
Query: 417 RVWEALL 423
+ L+
Sbjct: 695 YTYSCLI 701
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 136/346 (39%), Gaps = 27/346 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y I TL + + S+ + + K + + E I+ LI Y + D
Sbjct: 482 PDEWTYSVFIDTLCKRGLVEEARSLFESL-KEKGIKANEVIYSTLIDGYCKVGKVSDG-- 538
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+F +++ M++ G + T + ++ C++++ LL V M
Sbjct: 539 ------RFLLDK----------MLSAGCVPNSITYNSLIDGYCKEKNFKEARLL--VDIM 580
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K YT +I +L+K ++ A + +QM S G PD+ YT ++
Sbjct: 581 IKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRL 640
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
AE L ++ G++PD Y ++I+ + +++ ++ M E+G +P TY+ L
Sbjct: 641 KDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCL 700
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++ L + G+ N + D L + G
Sbjct: 701 IKHLSNAKPKEVSSSSELSDLSSGVASN------DFSNCWRRVDYEFTLDLFGKMAEHGC 754
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + + I GLC+ G + A L M +K SP ++ +LL
Sbjct: 755 APNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL 800
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 10/228 (4%)
Query: 212 VIRSLVKKEKVFDALGILNQM--KSDGIKPDIV--CYTMVLNGVIVQEDYVKAEEL---F 264
+I+S E L +L M + D K + CY M+L ++ ++ +E+ +
Sbjct: 136 MIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLL---MLLSRFLMIDEMKSVY 192
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+L + P+++T N +NG CK NV ++ + + G D TY +L+ C+
Sbjct: 193 LEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRN 252
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ ++ + M KG + N +Y+ +I G + EA L + +
Sbjct: 253 KNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTY 312
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
I LCQ G +AL + K+M +K P + L+ S +F
Sbjct: 313 TVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNF 360
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 140/361 (38%), Gaps = 55/361 (15%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDS 135
EP + Y +I L ++ +F + D + + P+ FI+ I Y R +D+
Sbjct: 586 EPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSH--PDVFIYTAFIHAYCSHGRLKDA 643
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMIN-DGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
E+L C +N G D +L + + R S D G +
Sbjct: 644 -------------------EVLICKMNAKGIMPDTMLYTLFIDAY--GRFGSIDGAFGIL 682
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV--CYTMVLNGVI 252
+ M ++G Y+ +I+ L + + S G+ + C+ V
Sbjct: 683 KRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRV----- 737
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
DY +LF ++ G P+ TY +I GLCK +E ++ M+E G P+
Sbjct: 738 ---DYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNED 794
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVL------NLQTYSIMIDGLASKGDIIEA- 365
YN+LL C+ L + ++W I++ +L + +++ GL +G+ +A
Sbjct: 795 IYNSLLGCSCQ------LGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAK 848
Query: 366 ---CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
C L+ N + D GL ++GL K +L M + + + L
Sbjct: 849 RVFCSFLQCEYNYDEMVWKVLID----GLLKKGLSDKCSDLFGIMETQGCQIHPKTYSML 904
Query: 423 L 423
+
Sbjct: 905 I 905
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 20/295 (6%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILSSV 179
LIK D +R D++++ ++ R+ +G+ ++ N +I G CV+ K+ +
Sbjct: 132 LIKGLCDGNRTDDAMDMVFR----RMPELGYTPDVFSYNALIK-GLCVEKKSQEAL---- 182
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
ELL + +V Y VI K+ +V A + ++M G+ P
Sbjct: 183 ---------ELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPP 233
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D+V Y +++G+ + KA + + G++PD TYN+ I G C +E ++++
Sbjct: 234 DVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLL 293
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M G +PDV+TY+ L+Q CK+ R + M KG N Y I++ G A+K
Sbjct: 294 KKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATK 353
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G +I+ LL+ + G+ + F+ IC + G V KA+ +M + P
Sbjct: 354 GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRP 408
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 39/324 (12%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++L+ MI DG + + ++++ + + + D+ + EM++ G +V Y+ VI
Sbjct: 361 DLLDLMIRDGIPFEHRAFNILICAYAKHG--AVDKAMTAFTEMRQNGLRPDVVSYSTVIH 418
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL----------- 263
L K +V DA+ NQM S+G+ P+I+ +T +++G+ ++ K EEL
Sbjct: 419 ILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 478
Query: 264 ------------------------FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
FD ++ +G+ PDV +YN I+G C ++ IK +
Sbjct: 479 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQL 538
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M +G +PD TYN+LL K + L +EM K + T +IM+ GL
Sbjct: 539 DRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQA 598
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
G I+ A L + +++G + ++ + GLC+ V +AL + + + K+ R +
Sbjct: 599 GRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTF 658
Query: 420 EALL--LSSVSKLDFVNTSFIRLV 441
++ L V ++D + F +V
Sbjct: 659 SIVINALLKVGRIDEAKSLFSAMV 682
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 126/284 (44%), Gaps = 6/284 (2%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
A+ + N M+ G + +++ C L D K G+ V
Sbjct: 72 AALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRL--DLAFAAFALFLKTGWRVQNVTL 129
Query: 210 TNVIRSLVKKEKVFDALG-ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+I+ L + DA+ + +M G PD+ Y ++ G+ V++ +A EL +
Sbjct: 130 NQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMT 189
Query: 269 VLG---LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
G P+V +YN I+G K+ V+ + M G PDV+TYN+L+ LCK +
Sbjct: 190 ADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQ 249
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ +++ M KG++ + +TY+IMI G S G + EA LL++ GL +
Sbjct: 250 AMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYS 309
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
I C+ G +A + M K P + ++ LL +K
Sbjct: 310 LLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATK 353
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ IL M + G D +T ++++ C L +E + +++M G +V Y+ +
Sbjct: 254 AVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQL--EEAVRLLKKMSGSGLQPDVVTYSLL 311
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ K + +A + + M G KP+ Y ++L+G + + +L D ++ G+
Sbjct: 312 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 371
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ +N+ I K V+ + M + G +PDV++Y+T++ LCK +
Sbjct: 372 PFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVY 431
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+M +G+ N+ +++ +I GL S G+ + L E +N+G+ + + + LC
Sbjct: 432 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 491
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V +A + + V P + L+
Sbjct: 492 KEGRVVEAQDFFDMVIHIGVKPDVVSYNTLI 522
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 23/270 (8%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+C GK DE + + M +G Y +++ K +V
Sbjct: 523 DGYCFVGKM----------------DESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRV 566
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DAL + +M +K + ++L+G+ V A EL+ +++ G + TYN
Sbjct: 567 EDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 626
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKP---DVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ GLC+ + V+ ++M E+L SK DV T++ ++ AL KV ++ + L M
Sbjct: 627 LGGLCENSCVDEALRMF---EDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVL 683
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G V ++ TYS+MI +G + E+ L G S M + + L ++G VR+
Sbjct: 684 RGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRR 743
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSK 429
A L ++ +K+ S A ALL+ VS+
Sbjct: 744 AGTYLTKIDEKNFSLEAST-AALLIPIVSE 772
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y V+ L + V +AL + ++S + D+ +++V+N ++ +A+ LF ++
Sbjct: 623 YNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMV 682
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ G VPDV TY++ I ++ +E + ME+ G D N +++ L + ++
Sbjct: 683 LRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVR 742
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
R + ++ K L T +++I ++ K
Sbjct: 743 RAGTYLTKIDEKNFSLEASTAALLIPIVSEK 773
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD Y++++NG+ + A ELFDE+LV
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK+ V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 242 GLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 302 NDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P + ++
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 394
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PD TY+ L+ LCK +++
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDAN 232
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N T++ +IDG KG + A + + L++ L ++ I GL
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGL 292
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A +L+ +M K + P + L+
Sbjct: 293 CKKGDLKQANDLIDEMVMKGLKPDKITYTTLI 324
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKM--DDANELFDEMLVKGLVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I KK +V A+ I +M S + PD++ Y ++ G+ + D +A +L D
Sbjct: 247 GVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+++ GL PD TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 307 EMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ + LL+E G
Sbjct: 367 RSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNG 417
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C++ + D + + M ++ Y +
Sbjct: 231 ANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRV--DLAMEIYKRMLSQSLLPDLITYNTL 288
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 289 IYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENI 348
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ +
Sbjct: 349 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSR 408
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 409 LLKEMQRNGHVPSVVTYNVLMNG 431
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 125 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 178
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G+ PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 179 TLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVK 238
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL+P+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 239 GLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQA 298
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 299 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISG 358
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P + ++
Sbjct: 359 LCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 391
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 110 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 169
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G PDV TY+ L+ LCK +++
Sbjct: 170 LRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDAN 229
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG++ N T++ +IDG G + A + + L++ L ++ I GL
Sbjct: 230 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGL 289
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A +L+ +M+ K + P + L+
Sbjct: 290 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 321
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 186 RLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLIPN 243
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I +M S + PD++ Y ++ G+ + D +A +L D
Sbjct: 244 GVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 303
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 304 EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEG 363
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ + LL+E G
Sbjct: 364 RSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 414
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ + D + + M ++ Y +
Sbjct: 228 ANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRV--DFAMEIYKRMLSQSLLPDLITYNTL 285
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD YT +++G + D A E ++ +
Sbjct: 286 IYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENI 345
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ + +
Sbjct: 346 RLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSK 405
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G ++ TY+++++G
Sbjct: 406 LLKEMQRNGHAPSVVTYNVLMNG 428
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 5/278 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R A +L G VD + +++ C L + L + +
Sbjct: 121 RRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL-----IASMPVAPD 175
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
YT +IR L + +V +AL +L+ M G +P +V YT++L V + +A E+ D
Sbjct: 176 AYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD 235
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G P++ TYNV ING+C++ V+ + + + G +PD ++Y T+L+ LC +
Sbjct: 236 EMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAK 295
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ EL EM K + N T+ +++ G + A +LE+ G +++ +
Sbjct: 296 RWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCN 355
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I +C++G V A + L M SP + +L
Sbjct: 356 IVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 393
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 42/321 (13%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RVG A+ +L+ M++ G T +++L +VC+ + + + EM+ G +V
Sbjct: 190 GRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG--QAMEVLDEMRAKGCTPNIV 247
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + ++ +V DA LN++ S G +PD V YT VL G+ + + EELF E+
Sbjct: 248 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 307
Query: 268 LVLGLVPDVYTY-----------------------------------NVYINGLCKQNNV 292
+ +P+ T+ N+ IN +CKQ V
Sbjct: 308 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 367
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + + M G PD I+Y T+L+ LC+ +EL+KEM K N T++
Sbjct: 368 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 427
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I L KG I +A L+E+ G ++ + G C +G V ALEL M K
Sbjct: 428 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK-- 485
Query: 413 SPGARVWEALL--LSSVSKLD 431
P + LL L + +LD
Sbjct: 486 -PNTITYTTLLTGLCNAERLD 505
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 167/392 (42%), Gaps = 57/392 (14%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C+P Y +++ + +++ F VLD E R TP + ++I
Sbjct: 197 SLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD--EMRAKGCTPNIVTYNVI-- 252
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+N R RV A E LN + + GF D + + +L +C +
Sbjct: 253 ----------INGM-----CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 297
Query: 186 SSDELLGFVQEMKK-------------LGFC-FGMVDYT--------------------N 211
E L F + M+K FC GMV+
Sbjct: 298 EDVEEL-FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 356
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI ++ K+ +V DA LN M S G PD + YT VL G+ E + A+EL E++
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+ T+N +I LC++ +E +I M E G + +++TYN L+ C ++
Sbjct: 417 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 476
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL M K N TY+ ++ GL + + A LL E L K F+ +
Sbjct: 477 ELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
CQ+GL+ +A+EL++QM + +P + LL
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +IR+L ++ + DA +L + G D+ Y ++ G A L + V
Sbjct: 113 TKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV 172
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
PD YTY I GLC + V + ++ M G +P V+TY LL+A+CK +
Sbjct: 173 ---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 229
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
E++ EM+ KG N+ TY+++I+G+ +G + +A L + G + + +
Sbjct: 230 AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLK 289
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC EL +M +K+ P ++ L+
Sbjct: 290 GLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 149/331 (45%), Gaps = 29/331 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ Y C P +Y V+K L ++ D +L + R+N E F I
Sbjct: 373 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM-VRKNCPPNEVTFNTFICIL 431
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGK-------------- 170
+ + L ++ + G + I+ N ++N GFCV G+
Sbjct: 432 CQKGLIEQATMLIEQMSEH-----GCEVNIVTYNALVN-GFCVQGRVDSALELFYSMPCK 485
Query: 171 ----TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
T + +L+ +C L D + EM + +V + ++ +K + +A+
Sbjct: 486 PNTITYTTLLTGLCNAERL--DAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 543
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
++ QM G P+++ Y +L+G+ + +A EL L+ G+ PD+ TY+ I L
Sbjct: 544 ELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 603
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
+++ VE IKM +++LG +P + YN +L ALCK + + M G + N
Sbjct: 604 SREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNE 663
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
TY +I+GLA++ + E LL E ++G+
Sbjct: 664 LTYITLIEGLANEDFLKETRDLLRELCSRGV 694
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 161/368 (43%), Gaps = 27/368 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
+L S + C + VI T+ + + D L+++ +P+ I + ++K
Sbjct: 338 VLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC--SPDTISYTTVLKG 395
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
A R++D+ L ++ + NC N+ + C L + EQ +
Sbjct: 396 LCRAERWEDAKELLKEMVR------------KNCPPNE-VTFNTFICILCQKGLIEQATM 442
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+++M + G +V Y ++ + +V AL + M KP+ + YT
Sbjct: 443 -------LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYT 492
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+L G+ E A EL E+L P+V T+NV ++ C++ ++ I+++ M E
Sbjct: 493 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 552
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P++ITYNTLL + K EL+ + G+ ++ TYS +I L+ + + EA
Sbjct: 553 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 612
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + G+ ++ ++++ + LC+R A++ M P + L+
Sbjct: 613 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY-ITLIE 671
Query: 426 SVSKLDFV 433
++ DF+
Sbjct: 672 GLANEDFL 679
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A L D G PDVY I LC++ +++ E G+ DV YNTL+
Sbjct: 92 RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
C+ +L+ R L+ M + + TY+ +I GL +G + EA LL++ L++G
Sbjct: 152 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG-- 206
Query: 379 TQSSMFDETIC--GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
Q S+ T+ +C+ +A+E+L +M K +P + ++
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 253
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 3/281 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ +L M GF T + I +C + D++ L V+EM+ G +
Sbjct: 506 NRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTG--ALDMVREMRVHGHEPWIK 563
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +++ L K+++ +A L +M +G PDIV Y+ ++G + + +A E+F ++
Sbjct: 564 HYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDI 623
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G PDV YN ING CK V ++ M G P V+TYN L+ CK ++
Sbjct: 624 CARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDI 683
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++ + M K N+ TY+ +IDGL + G +A L E KG F
Sbjct: 684 DQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIAL 743
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
I GLC+ G AL ++M +++ +P V+ AL+ S +S
Sbjct: 744 IHGLCKCGWPDAALLYFREMGERE-TPDTIVYVALITSFIS 783
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 186/462 (40%), Gaps = 69/462 (14%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
VR S + +A +K +K +P + + + AK+ ++++L ++ I
Sbjct: 313 FVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPD 372
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFV---IKTLAENSQFCDISSVLDHIEKRENFETPEF 117
ILS L I C + Y + ++ L + +SVL+ + ++ + +
Sbjct: 373 IQILSKL-----IAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYY 427
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+ L D + VN F+ + + R + F+I I DG C GK
Sbjct: 428 L---LRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVI------DGLCNTGKL----- 473
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
D L ++M ++G ++ Y N+I L ++ + +L +MK G
Sbjct: 474 -----------DLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSG 522
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL-------------------------- 270
+P + + + +ED A ++ E+ V
Sbjct: 523 FRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEAC 582
Query: 271 ---------GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
G +PD+ Y+ I+G K V+ +++ + G PDV+ YNTL+
Sbjct: 583 NFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGF 642
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CKV+ ++ +++ EM KG+V ++ TY+++IDG GDI +A L + K
Sbjct: 643 CKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNV 702
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC G A+ L +M K SP + AL+
Sbjct: 703 ITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALI 744
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 259 KAEELFDELLVLGL-VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A LFD++ ++ L VP+ Y++N + + K +++ + M + G +PD T ++
Sbjct: 181 EANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSV 240
Query: 318 LQALCKVR----------------------------------ELNRLRELVKEMKWKGIV 343
LQA C R E+++ EL++ M+ GI
Sbjct: 241 LQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIR 300
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
LN +T+ ++I G + + +A L ++ G S++D I GLC + + KAL L
Sbjct: 301 LNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHL 360
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLD 431
L +M + + P ++ L+ ++D
Sbjct: 361 LSEMKELGIDPDIQILSKLIAYCSEEVD 388
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I V A+EI + G+C D + +++ C+ + +S E + EM G
Sbjct: 609 KIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVS--EAHDILDEMVAKGLVPS 666
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I K + A L++M +P+++ YT +++G+ A L++
Sbjct: 667 VVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWN 726
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK--PDVITYNTLLQALCK 323
E+ G P+ ++ I+GLCK +A + E+G + PD I Y L+ +
Sbjct: 727 EMRGKGCSPNRISFIALIHGLCKCGWPDAALLY---FREMGERETPDTIVYVALITSFIS 783
Query: 324 VRELNRLRELVKEMKWKG 341
+ E++KEM KG
Sbjct: 784 NKNPTLAFEILKEMVAKG 801
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A +IL+ M+ G T +L++ C+ D+ D+ + M
Sbjct: 644 KVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDI--DQAFHCLSRMVGKEREPN 701
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT +I L + DA+ + N+M+ G P+ + + +++G + + + A L+
Sbjct: 702 VITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHG-LCKCGWPDAALLYF 760
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+ PD Y I N +++ M G PD + N L
Sbjct: 761 REMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPLDKNDL 812
>gi|224081503|ref|XP_002306437.1| predicted protein [Populus trichocarpa]
gi|222855886|gb|EEE93433.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 181/387 (46%), Gaps = 50/387 (12%)
Query: 50 PTKQQQQIPKQPHILSSLL---HSFSIYNCE-PPPEAYHFVIKTLAENSQFCD--ISS-- 101
P++QQQQ PH L +S + E PPP F +L E + IS+
Sbjct: 22 PSQQQQQ----PHYFPKKLTKKNSPKPHETETPPPHKSLFKTSSLNEAKSLFNSFISTTK 77
Query: 102 --VLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF----YKIPKFRINRVGF--- 152
+LD++ +F +++Y DS++L +P +R +
Sbjct: 78 APLLDNLRLHNSF----------LQSYTSISTLDDSISLLDHMVKTLPSLSPDRSTYHVL 127
Query: 153 --------------AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
A ++LN MIN GF + T + + S+C + D+ + V+E
Sbjct: 128 LSQSCREPDSSLSSAQKVLNLMINKGFKPNQFTVDVAIRSLCSAGRV--DDAILLVKEFS 185
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDAL-GILNQMKSD-GIKPDIVCYTMVLNGVIVQED 256
Y +++ L K ++F+++ +++MKS IKPD+V YT++++ V ++
Sbjct: 186 SKHSKPDTFTYNFLVKCLCK-SRIFNSVYSFIDEMKSSFDIKPDLVTYTILIDNVCNAKN 244
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A+ L L GL PD + YN + G C N +++ M+E G +PD++TYNT
Sbjct: 245 IREADRLVAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQMKEEGVEPDLVTYNT 304
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ L K ++ ++L+K M G + TY+ +++G+ +GD++ A LLEE KG
Sbjct: 305 LIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREGDVLGAAALLEEMELKG 364
Query: 377 LCTQSSMFDETICGLCQRGLVRKALEL 403
S ++ + G C+ + K +EL
Sbjct: 365 CSPNSCTYNTLLHGFCKGRRLNKGVEL 391
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 2/203 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +VC +++ + L V +K+ G Y +++ K +A+ I
Sbjct: 231 TYTILIDNVCNAKNIREADRL--VAVLKECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYK 288
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QMK +G++PD+V Y ++ G+ +A++L ++ G PD TY +NG+C++
Sbjct: 289 QMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTSLMNGMCREG 348
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+V ++ ME G P+ TYNTLL CK R LN+ EL +K G+ L +Y+
Sbjct: 349 DVLGAAALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGGMKLETASYA 408
Query: 351 IMIDGLASKGDIIEACGLLEEAL 373
+ L +G + EA + + A+
Sbjct: 409 TFVRALCREGRVAEAYEVFDYAV 431
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 115/298 (38%), Gaps = 58/298 (19%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ FS + +P Y+F++K L ++ F + S +D ++ + + + LI
Sbjct: 180 LVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLVTYTILIDNV 239
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+A +++ L + + + F L I G+C+ K
Sbjct: 240 CNAKNIREADRLVAVLKECGLKPDAF----LYNTIMKGYCLLNKGI-------------- 281
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E + ++MK+ G +V Y +I L K +V +A +L M G PD V YT
Sbjct: 282 --EAVRIYKQMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTYTS 339
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV------------------------- 281
++NG+ + D + A L +E+ + G P+ TYN
Sbjct: 340 LMNGMCREGDVLGAAALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVELYGVIKKGG 399
Query: 282 ----------YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL---LQALCKVRE 326
++ LC++ V ++ E S DV Y TL L+ L K RE
Sbjct: 400 MKLETASYATFVRALCREGRVAEAYEVFDYAVESKSLTDVAAYTTLESTLKWLKKARE 457
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 188/400 (47%), Gaps = 27/400 (6%)
Query: 59 KQPHILSSLLHSFSIY-NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF 117
K PH S+ S + + P +H ++K L + +S +++ I + + + PE
Sbjct: 21 KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELI-RTQKCKCPED 79
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAI--EILNCMIND------------ 163
+ + +IK YA ++++F ++ + + G +LN +I
Sbjct: 80 VALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLY 139
Query: 164 ----GFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
G + +T ++++ C ++ + ELL ++ E GF + Y +I SL K
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQ---GFSPDVFSYGTLINSLAK 196
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV-LGLVPDVY 277
+ DAL + ++M G+ PD+ CY ++++G + D + A E+++ LL + P++
Sbjct: 197 NGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIP 256
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
+YNV INGLCK + ++ M++ D+ TY+TL+ LC L+ + KEM
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 316
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
G+ ++ Y+ M++G G IE C L + + K C ++ I GL + V
Sbjct: 317 AENGVSPDVVVYNTMLNGYLRAGR-IEECLELWKVMEKEGCRTVVSYNILIRGLFENAKV 375
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+A+ + + + +KD + + +L+ + K ++N +
Sbjct: 376 DEAISIWELLPEKDCCADSMTY-GVLVHGLCKNGYLNKAL 414
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 171/413 (41%), Gaps = 28/413 (6%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
++ I I LL S+Y P +Y+ +I L + +F + + ++K E
Sbjct: 231 KKGDILNASEIWERLLKGPSVY---PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG 287
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT- 171
+ + + LI + + ++ ++ + N V + + N M+N G+ G+
Sbjct: 288 QDL-YTYSTLIHGLCGSGNLDGATRVYKEMAE---NGVSPDVVVYNTMLN-GYLRAGRIE 342
Query: 172 -------------CSLILSSVCEQRDL----SSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
C ++S R L DE + + + + C + Y ++
Sbjct: 343 ECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVH 402
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L K + AL IL + ++ D Y+ ++NG+ + + + D++ G P
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 462
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ + N ING + + +E ++ M G P V+TYNTL+ L K + LV
Sbjct: 463 NPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 522
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
KEM KG N+ TYS++++GL + A L +AL KG M + I GLC
Sbjct: 523 KEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSS 582
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
G V AL+L +M + P L+ DF S ++ D IL +
Sbjct: 583 GKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERAS--KIWDHILQS 633
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 115/241 (47%), Gaps = 5/241 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN- 211
A+ IL N +D S +++ +C + L DE+ G + +M K G C N
Sbjct: 413 ALSILEEAENGRGDLDTFAYSSMINGLCREGRL--DEVAGVLDQMTKHG-CKPNPHVCNA 469
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI V+ K+ DAL M S G P +V Y ++NG+ E + +A L E+L G
Sbjct: 470 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P++ TY++ +NGLC+ ++ + + E G KPDV +N ++ LC ++
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L EMK + V NL T++ +++G D A + + L + + + + E C
Sbjct: 590 QLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL-QSWSSSNCYYMEHTCQG 648
Query: 392 C 392
C
Sbjct: 649 C 649
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E G +P + +YN+LL AL + + + + G+ NLQTY+I+I K
Sbjct: 106 EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 165
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+A LL +G + I L + G + AL+L +M ++ V+P + L
Sbjct: 166 DKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 225
Query: 423 LLSSVSKLDFVNTSFIRLVDQILNTP 448
+ K D +N S + +++L P
Sbjct: 226 IDGFFKKGDILNAS--EIWERLLKGP 249
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 174/381 (45%), Gaps = 30/381 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
LL C P Y+ +++ L E + + +L+ + R F P+ + + IK
Sbjct: 102 LLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF--PDVVTYNSFIKG 159
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
R ++ ++P D + + +++ +C+ DL
Sbjct: 160 LCKCDRVDEARKFLARMP---------------------VTPDVVSYTTVINGLCKSGDL 198
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
S + + +M G +V Y+++I K +V A+G+L+ M G +P++V Y
Sbjct: 199 DSASRM--LDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 256
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+L + KAE++ E+ G PDV +YN I+GLCK V+ + M E
Sbjct: 257 SLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 316
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P+ +Y+ L++ LCK +EL+ LV++ + K ++++ Y++++DGL G EA
Sbjct: 317 GCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEA 376
Query: 366 CGLLEEALNKGLCTQSSMFDETIC-GLCQRGLVRKALELLKQMADKDVSPGARVWEALL- 423
C L + L++ +C F + C+R + KAL++ KQM +++ W L+
Sbjct: 377 CALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVH 435
Query: 424 -LSSVSKLDFVNTSFIRLVDQ 443
L +L T + +VD+
Sbjct: 436 GLCVDDRLSDAETMLLTMVDE 456
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 186/427 (43%), Gaps = 59/427 (13%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
+C+P + +++ L ++Q +L + K + I+ LI Y+ A F
Sbjct: 5 SCQPDAFTFAILLRGLCRSNQLEKARQLLGRM-KEMGCVPDDAIYNALISGYSKAKDFGQ 63
Query: 135 SVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+ ++ K + R A+++L+ M + G + T ++I+
Sbjct: 64 AFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE 123
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+CE+R L DE ++EM G+ +V Y + I+ L K ++V +A L +M +
Sbjct: 124 GLCEERKL--DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---V 178
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PD+V YT V+NG+ D A + D++ G PDV TY+ I+G CK VE +
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238
Query: 298 MIACMEELGSKP-----------------------------------DVITYNTLLQALC 322
++ M +LG +P DV++YN + LC
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K + + + + M +G N +YS++++ L K ++ +A L+E+A K
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
++ + GLC+ G +A L ++ D+ + + ++L S K ++ + +++
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA-LQIHK 417
Query: 443 QILNTPC 449
Q+L C
Sbjct: 418 QMLERNC 424
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 7/265 (2%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
MI+ D T +++L +C L + +LLG MK++G Y +I K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLG---RMKEMGCVPDDAIYNALISGYSK 57
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ A L +M + P +V YT +++G+ A +L DE+ G P++YT
Sbjct: 58 AKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYT 117
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YNV + GLC++ ++ KM+ M G PDV+TYN+ ++ LCK ++ R+ + M
Sbjct: 118 YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP 177
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+ ++ +Y+ +I+GL GD+ A +L++ N+G + I G C+ G V
Sbjct: 178 ---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVE 234
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A+ LL M P + +LL
Sbjct: 235 RAMGLLDSMLKLGCRPNMVAYNSLL 259
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 163/356 (45%), Gaps = 32/356 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
LL S C P AY+ ++ L +L +E+R F TP+ + + I
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR-GF-TPDVVSYNACID 295
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
A R + + +F + M+ G + + S+++ +C++++
Sbjct: 296 GLCKAERVKKAKAVFDR------------------MVERGCTPNASSYSMLVEELCKKKE 337
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI-KPDIVC 243
L D+ + V++ ++ ++ YT ++ L K + +A + +++ + I +PD+
Sbjct: 338 L--DDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFF 395
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y ++L+ + KA ++ ++L +V T+N+ ++GLC + + M+ M
Sbjct: 396 YNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMV 454
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ G PD +TY TL+ A+CK + EL +E G V ++ TYS +I GL + ++
Sbjct: 455 DEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHE-NMA 513
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
E LL L+ ++++ I G + G L+L ++ + DV P AR +
Sbjct: 514 EEAYLLFTKLD------VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTF 563
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 131/328 (39%), Gaps = 66/328 (20%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQ 133
C P +Y +++ L + + D ++++ + RE ++ + ++ L+ RF
Sbjct: 317 GCTPNASSYSMLVEELCKKKELDDAITLVE--QAREKYQIVDILLYTVLLDGLCKGGRFD 374
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC-------SLILSSVCEQRDLS 186
++ LF K+ +D K C +++L S C++R +
Sbjct: 375 EACALFSKV------------------------LDEKICEPDVFFYNVMLDSHCKRRQI- 409
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D+ L ++M + C +V + ++ L +++ DA +L M +G PD V Y
Sbjct: 410 -DKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 467
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA------------ 294
+++ + A ELF+E + G VPDV TY+ I GL +N E
Sbjct: 468 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVAL 527
Query: 295 ----------------GIKMIACMEELGSKPDVITYNTLLQA-LCKVRELNRLRELVKEM 337
G+K+ + E +P+ T+ + L K L + R L
Sbjct: 528 WNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRA 587
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G +L + +ID A GD+ EA
Sbjct: 588 VKGGFFPDLFVANTLIDVFAKCGDLEEA 615
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 154/331 (46%), Gaps = 29/331 (8%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF----------------------YKIP 143
+E + N + ++F LI Y ++ +D++ + K+
Sbjct: 62 LETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLK 121
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
F++ GF EIL C G+ ++++ C+ D+ + + K G
Sbjct: 122 YFKL-VWGFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLR 174
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y ++ ++ + + + + M + G++PD+ Y++++NG+ + A L
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGL 234
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
FDE+LV GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 235 FDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+L + +L+ EM KG+ + TY+ +IDG +GD+ A + + + +
Sbjct: 295 KGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ I GLCQ G A ++L++M + P
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKP 385
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D G EM G
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DGANGLFDEMLVKGLVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 247 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 307 EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++++ KGD+ + LL+E G
Sbjct: 367 RSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDG 417
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 179/385 (46%), Gaps = 25/385 (6%)
Query: 61 PHI--LSSLLHSFS-IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF 117
PH L L SF+ + + PPP F K L ++ S+VL + ++F P
Sbjct: 126 PHFNTLDDALSSFNRMLHMHPPPSTVDFT-KLLTSIAKMKHYSTVLSLSTQMDSFGIPPD 184
Query: 118 IFI--DLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILN 158
++ LI ++ R + ++ K+ K ++G A+ + +
Sbjct: 185 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFD 244
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
I +GF D T +++ +C+ + S+ + ++ M + ++ Y +I SL K
Sbjct: 245 KTIGEGFQPDVVTYGTLMNGLCKVGNTSAA--IRLLRSMVQKNCRPNVIAYNTIIDSLCK 302
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+V +A + ++M + GI PDI Y +++ + ++ L +E++ ++P+V
Sbjct: 303 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 362
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
++ ++ LCK+ + ++ M + G +PDV+TY L+ C E++ ++ M
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KG V N+++Y+I+I+G + +A GLLE+ +GL + ++ I GLC G ++
Sbjct: 423 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 482
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
A+ L +M P + LL
Sbjct: 483 HAIALFHEMVASGQIPDLVTYRILL 507
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 139/274 (50%), Gaps = 8/274 (2%)
Query: 153 AIEILNCMINDGFCVDGKTC-SLI--LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
A + + MI G D T SLI L ++CE + +++ + EM +V +
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTT-----LLNEMVNSKIMPNVVVF 363
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ V+ +L K+ + A +++ M G++PD+V YT +++G ++ + +A ++FD ++
Sbjct: 364 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G VP+V +YN+ ING C+ ++ + ++ M G D +TYNTL+ LC V L
Sbjct: 424 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 483
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L EM G + +L TY I++D L + EA LL+ L +++ I
Sbjct: 484 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 543
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+C+ G + A +L ++ K + P R + ++
Sbjct: 544 GMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 577
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 172/391 (43%), Gaps = 22/391 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S NC P AY+ +I +L ++ Q + ++ + + F + LI
Sbjct: 277 LLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK-GISPDIFTYNSLIHAL 335
Query: 127 ADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDG 169
+ ++ L ++ +I + A ++++ MI G D
Sbjct: 336 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDV 395
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T + ++ C + ++ DE + M G + Y +I + +++ A+G+L
Sbjct: 396 VTYTALMDGHCLRSEM--DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLL 453
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
QM G+ D V Y +++G+ A LF E++ G +PD+ TY + ++ LCK
Sbjct: 454 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN 513
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+++ + ++ +E D++ YN + +C+ EL R+L + KG+ +++TY
Sbjct: 514 HHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTY 573
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+IMI GL +G + EA L + G +++ I G + A +LL++M
Sbjct: 574 NIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLA 633
Query: 410 KDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
+ S A V L+ + D ++ SF RL
Sbjct: 634 EGFS--ADVSTTTLIVEMLSDDGLDQSFERL 662
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 136/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL+C G+ ++++ C++ D+ +L+ + K G +V +
Sbjct: 122 GFYEEILDC----GYPASLYFFNILMHRFCKEGDIRVAQLV--FNAITKWGLRPSVVSFN 175
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A LFDE+L
Sbjct: 176 TLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDK 235
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 236 GLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 296 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISG 355
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P + ++
Sbjct: 356 LCQEGRYLDAEKVLREMLSVGLKPDTGTYTMII 388
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 105/199 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA G+ ++M G+ P+ V +T ++ G A E++ ++L
Sbjct: 209 YSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L PD+ TYN I GLCK+ +++ +I M G KPD ITY TL+ CK +L
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E L+ GL + + I
Sbjct: 329 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQM 407
C++G V +LLK+M
Sbjct: 389 NEFCKKGDVWTGSKLLKEM 407
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M G D T S++++ +C++ + D+ G EM G
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM--DDANGLFDEMLDKGLVPN 240
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 241 GVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLID 300
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 301 EMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEG 360
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 361 RYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 107/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ + D A+ +F+ + G
Sbjct: 107 VLEHLMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWG 166
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V ++N +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L EM KG+V N T++ +I G + A + ++ L++ L ++ I GL
Sbjct: 227 GLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A +L+ +M+ K + P + L+
Sbjct: 287 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A+EI M++ D T + ++ +C++ DL L + EM G +
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDL--IDEMSMKGLKPDKIT 313
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +I K+ + A +M + I+ D V YT +++G+ + Y+ AE++ E+L
Sbjct: 314 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREML 373
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+GL PD TY + IN CK+ +V G K++ M+ G P V++
Sbjct: 374 SVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G +G T + +++ C+ R + D + ++M ++ Y +I L KK
Sbjct: 232 MLDKGLVPNGVTFTTLIAGHCKNRRV--DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 289
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ A ++++M G+KPD + YT +++G + D A E ++ + D Y
Sbjct: 290 GDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAY 349
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+GLC++ K++ M +G KPD TY ++ CK ++ +L+KEM+
Sbjct: 350 TALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Query: 340 KGIV 343
G V
Sbjct: 410 DGHV 413
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 188/400 (47%), Gaps = 27/400 (6%)
Query: 59 KQPHILSSLLHSFSIY-NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF 117
K PH S+ S + + P +H ++K L + +S +++ I + + + PE
Sbjct: 21 KNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELI-RTQKCKCPED 79
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAI--EILNCMIND------------ 163
+ + +IK YA ++++F ++ + + G +LN +I
Sbjct: 80 VALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLY 139
Query: 164 ----GFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
G + +T ++++ C ++ + ELL ++ E GF + Y +I SL K
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQ---GFSPDVFSYGTLINSLAK 196
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV-LGLVPDVY 277
+ DAL + ++M G+ PD+ CY ++++G + D + A E+++ LL + P++
Sbjct: 197 NGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIP 256
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
+YNV INGLCK + ++ M++ D+ TY+TL+ LC L+ + KEM
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 316
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
G+ ++ Y+ M++G G IE C L + + K C ++ I GL + V
Sbjct: 317 AENGVSPDVVVYNTMLNGYLRAGR-IEECLELWKVMEKEGCRTVVSYNILIRGLFENAKV 375
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+A+ + + + +KD + + +L+ + K ++N +
Sbjct: 376 DEAISIWELLPEKDCCADSMTY-GVLVHGLCKNGYLNKAL 414
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 4/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN- 211
A+ IL N +D S +++ +C + L DE+ G + +M K G C N
Sbjct: 413 ALSILEEAENGRGDLDTFAYSSMINGLCREGRL--DEVAGVLDQMTKHG-CKPNPHVCNA 469
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI V+ K+ DAL M S G P +V Y ++NG+ E + +A L E+L G
Sbjct: 470 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P++ TY++ +NGLC+ ++ + + E G KPDV +N ++ LC ++
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L EMK + V NL T++ +++G D A + + L G ++ T+ GL
Sbjct: 590 QLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGL 649
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C + A+ L D+ V P A W L+
Sbjct: 650 CSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 28/411 (6%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
++ I I LL S+Y P +Y+ +I L + +F + + ++K E
Sbjct: 231 KKGDILNASEIWERLLKGPSVY---PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG 287
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT- 171
+ + + LI + + ++ ++ + N V + + N M+N G+ G+
Sbjct: 288 QD-LYTYSTLIHGLCGSGNLDGATRVYKEMAE---NGVSPDVVVYNTMLN-GYLRAGRIE 342
Query: 172 -------------CSLILSSVCEQRDL----SSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
C ++S R L DE + + + + C + Y ++
Sbjct: 343 ECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVH 402
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L K + AL IL + ++ D Y+ ++NG+ + + + D++ G P
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 462
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ + N ING + + +E ++ M G P V+TYNTL+ L K + LV
Sbjct: 463 NPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 522
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
KEM KG N+ TYS++++GL + A L +AL KG M + I GLC
Sbjct: 523 KEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSS 582
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
G V AL+L +M + P L+ DF S ++ D IL
Sbjct: 583 GKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERAS--KIWDHIL 631
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 124/281 (44%), Gaps = 21/281 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
AY +I L + +++ VLD + K P + +I + A + +D++ F
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH-VCNAVINGFVRASKLEDALRFFGN 489
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
M++ G T + +++ + + S E V+EM G
Sbjct: 490 ------------------MVSKGCFPTVVTYNTLINGLSKAERFS--EAYALVKEMLHKG 529
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+ M+ Y+ ++ L + +K+ AL + Q G KPD+ + ++++G+ A
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+L+ E+ VP++ T+N + G K + E K+ + + G +PD+I+YN L+ L
Sbjct: 590 QLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGL 649
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
C ++ + + +G++ T++I++ + G +
Sbjct: 650 CSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E G +P + +YN+LL AL + + + + G+ NLQTY+I+I K
Sbjct: 106 EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 165
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+A LL +G + I L + G + AL+L +M ++ V+P + L
Sbjct: 166 DKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 225
Query: 423 LLSSVSKLDFVNTSFIRLVDQILNTP 448
+ K D +N S + +++L P
Sbjct: 226 IDGFFKKGDILNAS--EIWERLLKGP 249
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 144/306 (47%), Gaps = 37/306 (12%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A +L ++ G + T + ++ C + DL D+ + EM G +
Sbjct: 302 RIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDL--DKAFAYRDEMMNRGIVASVFT 359
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL- 267
Y +I +L ++++ +A ++ +M+ G++PD+V Y + +NG + KA LFDE+
Sbjct: 360 YNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMV 419
Query: 268 ----------------------------------LVLGLVPDVYTYNVYINGLCKQNNVE 293
+ G++PD+ +N I+G C N++
Sbjct: 420 EKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNID 479
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++ M+ PD +T+NTL+Q C+ R++ ++L+ EMK +GI + +Y+ +I
Sbjct: 480 RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLI 539
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
G + +GD+ +A + +E L+ G ++ I G + G A ELL++M K ++
Sbjct: 540 SGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGIT 599
Query: 414 PGARVW 419
P +
Sbjct: 600 PDDSTY 605
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 142/272 (52%), Gaps = 4/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV-QEMKKLGFCFGMVDYTN 211
A+E LN M + +TC+ +LS + + + ++ FV +EM K+ +V +
Sbjct: 166 ALECLNLMKENEIIPKTETCNSLLSLLLKLNKI---KMAWFVYEEMVKMNIKSSIVTFNI 222
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L ++ K A + M+ G+KP++V Y V+NG ++ + A ++F +
Sbjct: 223 MINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKN 282
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L PD YTYN +I+ LCK+ +E ++ + E G P+ +TYN L+ C +L++
Sbjct: 283 LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAF 342
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EM +GIV ++ TY+++I L + I EA +++E KG+ ++ I G
Sbjct: 343 AYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGY 402
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G +KAL L +M +K++ P + +L+
Sbjct: 403 CRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 132/268 (49%), Gaps = 21/268 (7%)
Query: 158 NCMINDGFCVDGK--TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
N +IN G+C+ GK S I ++ + ++L D C+ Y + I
Sbjct: 256 NTVIN-GYCLRGKFEAASKIFKTM-KDKNLKPD--------------CYT---YNSFISR 296
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K+ ++ +A G+L ++ G+ P+ V Y +++G + D KA DE++ G+V
Sbjct: 297 LCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVAS 356
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V+TYN+ I+ L + +E MI M E G +PDV+TYN + C+ + L
Sbjct: 357 VFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFD 416
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM K I ++TY+ +ID + + EA ++++ +G+ MF+ I G C G
Sbjct: 417 EMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNG 476
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+ +A +LLK+M + V P + L+
Sbjct: 477 NIDRAFQLLKEMDNAKVVPDEVTFNTLM 504
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 2/240 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F R+ A +++ M G D T ++ ++ C R ++ + L EM +
Sbjct: 368 FLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYC--RCGNAKKALSLFDEMVEKNIRP 425
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ YT++I K+ ++ +A + +G+ PDI+ + +++G V + +A +L
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ +VPD T+N + G C++ VE K++ M+E G KPD I+YNTL+ K
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKR 545
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ E+ EM G L TY+ +I G + G+ A LL E +KG+ S +
Sbjct: 546 GDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 79/140 (56%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L +M + + PD V + ++ G + +A++L DE+ G+ PD +YN I+
Sbjct: 481 AFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLIS 540
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G K+ +++ +++ M LG P ++TYN L+Q K+ E + EL++EM+ KGI
Sbjct: 541 GYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITP 600
Query: 345 NLQTYSIMIDGLASKGDIIE 364
+ TY +I+ + + D++E
Sbjct: 601 DDSTYLYVIEAMKTNDDLVE 620
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+AL LN MK + I P +L+ ++ A +++E++ + + + T+N+ I
Sbjct: 165 EALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMI 224
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N LC++ + I ME G KP+V+TYNT++ C + ++ K MK K +
Sbjct: 225 NILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLK 284
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ TY+ I L + I EA G+L + L GL + ++ I G C +G + KA
Sbjct: 285 PDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAY 344
Query: 404 LKQMADKDVSPGARVWEALL 423
+M ++ + + L+
Sbjct: 345 RDEMMNRGIVASVFTYNLLI 364
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
I + N +I DG CV+G D ++EM V + ++
Sbjct: 462 IIMFNALI-DGHCVNGNI----------------DRAFQLLKEMDNAKVVPDEVTFNTLM 504
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
+ ++ KV +A +L++MK GIKPD + Y +++G + D A E+FDE+L LG
Sbjct: 505 QGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFD 564
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
P + TYN I G K + +++ M+ G PD TY +++A+
Sbjct: 565 PTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M ++ K ++T+N ++ LC+ + + ++ + M+ G+ N+ TY+ +I+G +G
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
A + + +K L ++ I LC+ + +A +L ++ + + P A + A
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327
Query: 422 LLLSSVSKLDFVNTSFIRLVDQILN 446
L+ +K D R D+++N
Sbjct: 328 LIDGCCNKGDLDKAFAYR--DEMMN 350
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +V A ++L+ M G D + + ++S ++ D+ + L EM LGF
Sbjct: 509 RERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMK--DALEVFDEMLSLGFDPT 566
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
++ Y +I+ K + A +L +M+S GI PD Y V+ + +D V+ ++
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVENDD 623
>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 133/254 (52%), Gaps = 3/254 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
+ LN M++DG D T L + S+C + D+ + ++E+ + Y +++
Sbjct: 149 QTLNLMVSDGISPDKGTVDLAVRSLCTADRV--DDAVELIKELSSKHCSPDIYSYNFLVK 206
Query: 215 SLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
+L K + +++M++ +KP++V YT++++ V ++ +A L D L G
Sbjct: 207 NLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFK 266
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PD + YN + G C + I++ M+E G +PD+ITYNTL+ L K ++ ++L
Sbjct: 267 PDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKL 326
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
++ M KG + TY+ +++G+ KG+ + A LLEE KG + ++ + GLC+
Sbjct: 327 LRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCK 386
Query: 394 RGLVRKALELLKQM 407
+ KA+EL M
Sbjct: 387 SRMFDKAMELYGAM 400
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 16/302 (5%)
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMI--NDGFCVDGKTCSLILSSVCEQRDLSSD 188
RF +S+ Y I+ + +I L M + F D T ++L+ C+ D S
Sbjct: 87 RFHNSLLQSYA----SISTINDSIAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTD-SKY 141
Query: 189 ELLGFVQEMKKLGFCFGM------VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
L + + L G+ VD +RSL ++V DA+ ++ ++ S PDI
Sbjct: 142 STLSLIHQTLNLMVSDGISPDKGTVDL--AVRSLCTADRVDDAVELIKELSSKHCSPDIY 199
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLV-LGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y ++ + DE+ + P++ TY + I+ +C N+ +++
Sbjct: 200 SYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDI 259
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
+EE G KPD YNT+++ C + + E+ MK KG+ +L TY+ +I GL+ G
Sbjct: 260 LEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGR 319
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ EA LL KG + + G+C++G AL LL++M K SP +
Sbjct: 320 VSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNT 379
Query: 422 LL 423
LL
Sbjct: 380 LL 381
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 2/203 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +VC ++L E V +++ GF Y +++ + +A+ + N
Sbjct: 236 TYTILIDNVCNTKNLR--EATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYN 293
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK G++PD++ Y ++ G+ +A++L + G PD TY +NG+C++
Sbjct: 294 RMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKG 353
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
A + ++ ME G P+ TYNTLL LCK R ++ EL MK G+ L++ +Y+
Sbjct: 354 ETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYA 413
Query: 351 IMIDGLASKGDIIEACGLLEEAL 373
+ L S G + +A + + A+
Sbjct: 414 TFVRALCSVGRVADAYEVFDYAV 436
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 126/258 (48%), Gaps = 3/258 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLGFCFGM 206
+RV A+E++ + + D + + ++ ++C+ R LS + F+ EM+ K +
Sbjct: 177 DRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLS--LVYAFIDEMRTKFDVKPNL 234
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I ++ + + +A +++ ++ +G KPD Y ++ G + +A E+++
Sbjct: 235 VTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNR 294
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ PD+ TYN I GL K V K++ M E G PD +TY +L+ +C+ E
Sbjct: 295 MKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGE 354
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L++EM+ KG N TY+ ++ GL +A L + GL + +
Sbjct: 355 TLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYAT 414
Query: 387 TICGLCQRGLVRKALELL 404
+ LC G V A E+
Sbjct: 415 FVRALCSVGRVADAYEVF 432
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 116/272 (42%), Gaps = 19/272 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ S +C P +Y+F++K L ++ + + +D + + + + + LI
Sbjct: 185 LIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNV 244
Query: 127 ADAHRFQDSVNLF-------YKIPKFRINRV--GF--------AIEILNCMINDGFCVDG 169
+ +++ L +K F N + G+ AIE+ N M G D
Sbjct: 245 CNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDL 304
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T + ++ + + +S E ++ M + G V YT+++ + +K + AL +L
Sbjct: 305 ITYNTLIFGLSKSGRVS--EAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALL 362
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+M+ G P+ Y +L+G+ + KA EL+ + GL D+ +Y ++ LC
Sbjct: 363 EEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSV 422
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
V ++ E S DV Y+TL L
Sbjct: 423 GRVADAYEVFDYAVESKSLSDVAAYSTLESTL 454
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 155/323 (47%), Gaps = 27/323 (8%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNL--FYKIPKFRI-----NRV-------- 150
+E R + ++F LI Y ++ +D++ K KFR+ +V
Sbjct: 56 LETRGTQRSDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLK 115
Query: 151 ------GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
GF E L C G+ ++++ S C++ ++ + + K G
Sbjct: 116 YFKLVWGFYEESLEC----GYPASLYFFNILMHSFCKEGEIRLAQ--SVFDAITKWGLRP 169
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V + ++ +K + + + N M++ G++PD+ Y++++NG+ + A ELF
Sbjct: 170 SVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELF 229
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 230 DEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 289
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 290 GDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAY 349
Query: 385 DETICGLCQRGLVRKALELLKQM 407
I GLCQ G A ++L++M
Sbjct: 350 TALISGLCQEGRSVDAEKMLREM 372
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 97/178 (54%), Gaps = 1/178 (0%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ +FD + GL P V ++N +NG K ++ G ++ M+ G +PDV TY+ L+
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK +++ EL EM G+V N T++ +IDG G + A + ++ L++ L
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I GLC++G +++A +L+ +M+ K + P + L+ S + D + T+F
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD-LETAF 331
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ L + TY+++I+ KGD+ L++E G
Sbjct: 366 EKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 411
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G K ++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G V ++ T
Sbjct: 403 LMKEMQRDGYVPSVVT 418
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 175/412 (42%), Gaps = 55/412 (13%)
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
K+ ++ SL I P + V+ + +SQ C S L + K FE
Sbjct: 96 KRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKL-GFEPDLVT 154
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGF---------------AIEILNCMI 161
F L+ + +R +D++ LF +I FR N V + A+EI N M
Sbjct: 155 FTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMG 214
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
++G + T + ++S +CE S L +++M K G ++ +T +I + VK K
Sbjct: 215 DNGIRPNVVTYNSLVSGLCEIGRWSDAAWL--LRDMMKRGIQPNVITFTALIDAFVKVGK 272
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ +A + M + PD+ YT ++NG+ +A ++F + G P+ TY
Sbjct: 273 IMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTT 332
Query: 282 YINGLCKQNNVEAGIKMIACMEE--------------------------------LGSK- 308
I+G CK VE G K+ M + +GS+
Sbjct: 333 LIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRR 392
Query: 309 --PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD+ TYN LL LC + + + K M+ + + +N+ TY+I+I G+ G + +A
Sbjct: 393 APPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAF 452
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
L +KG+ + I G C+RG + +A L K+M + P V
Sbjct: 453 DLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 138/322 (42%), Gaps = 19/322 (5%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEI-LNC----------------MI 161
F L+ A RF ++LF ++ I+ V + I +NC M+
Sbjct: 85 FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMM 144
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
GF D T + +L C + ++ L ++ +GF +V YT +I L K
Sbjct: 145 KLGFEPDLVTFTSLLHGFCHWNRI--EDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRH 202
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ A+ I NQM +GI+P++V Y +++G+ + A L +++ G+ P+V T+
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTA 262
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+ K + ++ M ++ PDV TY L+ LC L+ R++ M+ G
Sbjct: 263 LIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNG 322
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
N TY+ +I G + + + E KGL + + I G C G A
Sbjct: 323 YYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQ 382
Query: 402 ELLKQMADKDVSPGARVWEALL 423
E+ QM + P R + LL
Sbjct: 383 EVFNQMGSRRAPPDIRTYNVLL 404
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 206 MVDYTNVIRSLVKKEKVFDA-LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+VD+T ++ S++ K K FD + + QM+ GI P + +V+N V +A
Sbjct: 82 IVDFTRLL-SVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFL 140
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ LG PD+ T+ ++G C N +E + + + +G +P+V+TY TL+ LCK
Sbjct: 141 GKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKN 200
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R LN E+ +M GI N+ TY+ ++ GL G +A LL + + +G+ F
Sbjct: 201 RHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF 260
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
I + G + +A EL K M V P + AL+ L + +LD
Sbjct: 261 TALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLD 309
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 196/464 (42%), Gaps = 70/464 (15%)
Query: 42 VKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISS 101
+K+S +Q+ +P H S+ +S +++ + P + +I+ LA + Q +
Sbjct: 40 IKESAVLKRLRQESCVPLALHFFKSIANS-NLF--KHTPLTFEVMIRKLAMDGQVDSVQY 96
Query: 102 VLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRI-------------- 147
+L + K + F E +FI +I Y + +V +FY+I +F
Sbjct: 97 LLQQM-KLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTL 155
Query: 148 ---NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
NR+ + M DGF + T +++L ++C+ + + L + EM G C
Sbjct: 156 LGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL--LVEMSNKGCCP 213
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMK--SDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V YT VI S+ + +G++ + + ++ +P + Y ++NG+ + DY E
Sbjct: 214 NAVSYTTVISSMCE-------VGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVE 266
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-------------------- 302
L E++ G+ P+V +Y+ IN L +E ++A M
Sbjct: 267 LMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCF 326
Query: 303 ----------------EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
G +P+V+ YNTL+Q C +++ + M+ G N+
Sbjct: 327 VRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNI 386
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+TY +I+G +G + A + + L G C ++ + LC+ ++A L++
Sbjct: 387 RTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEI 446
Query: 407 MADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTP 448
M+ ++ +P + A + L +LD+ F ++ Q P
Sbjct: 447 MSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPP 490
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 155/366 (42%), Gaps = 25/366 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S C P +Y VI S C++ V + + E FE ++ LI
Sbjct: 202 LLVEMSNKGCCPNAVSYTTVI------SSMCEVGMVKEGRQLAERFEPVVSVYNALINGL 255
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
++ V L ++ + I+ ++ A +L M+ G +
Sbjct: 256 CKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNI 315
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T S ++ C R + D L + Q ++ G +V Y +++ + A+ +
Sbjct: 316 HTLSSLVKG-CFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVF 374
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M+ G P+I Y ++NG + A +++++L G P+V Y + LC+
Sbjct: 375 LHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRH 434
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK-GIVLNLQT 348
+ + +I M + P V T+N ++ LC L+ ++ ++M+ + N+ T
Sbjct: 435 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVT 494
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ ++DGLA I EA GL E +G+ +S ++ + G C GL AL+L+ +M
Sbjct: 495 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMM 554
Query: 409 DKDVSP 414
SP
Sbjct: 555 VNGKSP 560
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 111/239 (46%), Gaps = 6/239 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ + M+++G + Y ++I K+ + A+ I N+M + G P++V YT +
Sbjct: 368 DKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSM 427
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE-LG 306
+ + + +AE L + + P V T+N +I GLC ++ K+ ME+
Sbjct: 428 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYR 487
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+++TYN LL L K + L +E+ +G+ + TY+ ++ G + G A
Sbjct: 488 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIAL 547
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L+ + + G + I C++G +A+++L VS G R W ++S
Sbjct: 548 QLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDL-----VSCGRRKWRPDVIS 601
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ I N M+ G C + + ++ ++C E L ++ M K + +
Sbjct: 405 AVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESL--IEIMSKENCAPSVPTFNAF 462
Query: 213 IRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
I+ L ++ A + QM+ P+IV Y +L+G+ +A L E+ + G
Sbjct: 463 IKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 522
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ TYN ++G C ++++ M G PD IT N ++ A CK + R
Sbjct: 523 VEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAV 582
Query: 332 ELV-----KEMKWKGIVLNLQTYSIMIDGL 356
+++ KW+ V+ +Y+ +I GL
Sbjct: 583 QMLDLVSCGRRKWRPDVI---SYTNVIWGL 609
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ L K ++ +A G+ ++ G++ Y +L+G A +L
Sbjct: 492 IVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVG 551
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM---IACMEELGSKPDVITYNTLLQALC 322
+++V G PD T N+ I CKQ E ++M ++C +PDVI+Y ++ LC
Sbjct: 552 KMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRR-KWRPDVISYTNVIWGLC 610
Query: 323 K 323
+
Sbjct: 611 R 611
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 147/312 (47%), Gaps = 37/312 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + + M G D T S ++ C + L E +G + EM + Y +
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK--EAIGLLNEMVLKTINPNVYTYNIL 275
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +L K+ KV +A +L M +KPD++ Y+ +++G + + KA+ +F+ + ++G+
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335
Query: 273 VPDVYTYNVYI-----------------------------------NGLCKQNNVEAGIK 297
PDV+TY + I +GLCK +
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+I M + G DVITY++L+ LCK L+R L +MK + I N+ T++I++DGL
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLC 455
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G + +A + ++ L KG ++ I G C++GL+ +AL +L +M D P A
Sbjct: 456 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAF 515
Query: 418 VWEALLLSSVSK 429
+E ++++ K
Sbjct: 516 TFETIIIALFKK 527
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 127/241 (52%), Gaps = 10/241 (4%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I +L K + V +A G+ ++M GI D+V Y+ ++ G ++ +A L +E++
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ + P+VYTYN+ ++ LCK+ V+ ++A M + KPDVITY+TL+ V E+
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK----GLCTQSSMF 384
+ + + M G+ ++ TY+I+I+G + EA L +E K G+ T SS+
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
D GLC+ G + +L+ +M D+ + +L+ L LD F ++ D
Sbjct: 382 D----GLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 437
Query: 443 Q 443
Q
Sbjct: 438 Q 438
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 181/400 (45%), Gaps = 28/400 (7%)
Query: 48 TPPTKQQQQI----PKQPHILS--SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISS 101
TPP Q +I K H + SL H + +P + +I Q S
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 102 VLDHIEKRENFETPEFIFID-LIKTYADAHRFQDSVNLFYKI--PKFRINRVGFAIEILN 158
VL I KR P+ + ++ LIK + + +++ K+ F++N+V +A I
Sbjct: 116 VLAKILKRG--YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 173
Query: 159 -CMINDGFC-------VDGKTC-------SLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
C I D +DG+ S I+ ++C+ + +S E G EM G
Sbjct: 174 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS--EAYGLFSEMTVKGIS 231
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y+ +I + K+ +A+G+LN+M I P++ Y ++++ + + +A+ +
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+L + PDV TY+ ++G V+ + M +G PDV TY L+ CK
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ ++ L KEM K +V + TYS +IDGL G I L++E ++G
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVIT 411
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ G + +A+ L +M D+++ P + LL
Sbjct: 412 YSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILL 451
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 145/301 (48%), Gaps = 15/301 (4%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL-NCMINDGFCVDGKTCSLILSSVC 180
LI + + ++++ L ++ IN + IL + + +G + K+ ++ C
Sbjct: 240 LIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC 299
Query: 181 EQRDLSSDELL--GF--VQEMKKLGFCFGMVD----------YTNVIRSLVKKEKVFDAL 226
+ D+ + L G+ V E+KK F + YT +I K + V +AL
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ +M + P IV Y+ +++G+ +L DE+ G DV TY+ I+GL
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGL 419
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK +++ I + M++ +P++ T+ LL LCK L +E+ +++ KG LN+
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY++MI+G +G + EA +L + + G + F+ I L ++ KA +LL+Q
Sbjct: 480 YTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQ 539
Query: 407 M 407
M
Sbjct: 540 M 540
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 90/151 (59%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ EM+ G ++ Y+++I L K + A+ + N+MK I+P+I +T++L+G+
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLC 455
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
A+E+F +LL G +VYTYNV ING CKQ +E + M++ ME+ G P+
Sbjct: 456 KGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAF 515
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
T+ T++ AL K E ++ +L+++M +G++
Sbjct: 516 TFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%)
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ V DA+ N+M P I+ + +L+ + Y A L L + G+ PD+ T
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ IN C + G ++A + + G PD +T NTL++ LC ++ + ++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G LN +Y+ +I+G+ GD A LL + + M+ I LC+ LV +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L +M K +S + L+
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLI 241
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + V A + N M G D T +++++ C+ + + DE L +EM +
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV--DEALNLFKEMHQKNMVP 372
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G+V Y+++I L K ++ ++++M+ G D++ Y+ +++G+ +A LF
Sbjct: 373 GIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 432
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ + P+++T+ + ++GLCK ++ ++ + G +V TYN ++ CK
Sbjct: 433 NKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L ++ +M+ G + N T+ +I L K + +A LL + + +GL
Sbjct: 493 GLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 201/484 (41%), Gaps = 74/484 (15%)
Query: 21 PLSPY----KAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNC 76
PL P+ + L + +K+ +Q+ +P H S+ +S +++
Sbjct: 16 PLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANS-NLF-- 72
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+ P + +I+ LA + Q + +L + K + F E +FI +I Y + +V
Sbjct: 73 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQM-KLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 137 NLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
+FY+I +F NR+ + M DGF + T +++L ++
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK--SDGI 237
C+ + + L + EM G C V YT VI S+ + +G++ + + ++
Sbjct: 192 CKNNKVDGAKKL--LVEMSNKGCCPDAVSYTTVISSMCE-------VGLVKEGRELAERF 242
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P + Y ++NG+ + DY A EL E++ G+ P+V +Y+ IN LC +E
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 298 MIACM------------------------------------EELGSKPDVITYNTLLQAL 321
+ M G +P+V+ YNTL+Q
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C + + + M+ G N++TY +I+G A +G + A + + L G C
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIR 439
++ + LC+ ++A L++ M+ ++ +P + A + L +LD+ F +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 440 LVDQ 443
+ Q
Sbjct: 483 MEQQ 486
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 162/385 (42%), Gaps = 63/385 (16%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S C P +Y VI S C++ V + E E FE ++ LI
Sbjct: 203 LLVEMSNKGCCPDAVSYTTVI------SSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
H ++ A E++ M+ G + + S +++ +C +
Sbjct: 257 CKEHDYKG------------------AFELMREMVEKGISPNVISYSTLINVLCNSGQI- 297
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYT 245
+ F+ +M K G + +++++ + FDAL + NQM + G++P++V Y
Sbjct: 298 -ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G + VKA +F + +G P++ TY ING K+ +++ + + M
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 306 GSKPDVITYNTLLQALC---KVRELNRLRELVKE----------------------MKWK 340
G P+V+ Y +++ALC K +E L E++ + + W
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 341 GIVL-----------NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
V N+ TY+ ++DGLA I EA GL E +G+ SS ++ +
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536
Query: 390 GLCQRGLVRKALELLKQMADKDVSP 414
G C GL AL+L+ +M SP
Sbjct: 537 GSCNAGLPGIALQLVGKMMVDGKSP 561
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 6/232 (2%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
M+++G + Y ++I K+ + A+ I N+M + G P++V YT ++ +
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVIT 313
+ +AE L + + P V T+N +I GLC ++ K+ ME+ P+++T
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVT 495
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN LL L K + L +E+ +G+ + TY+ ++ G + G A L+ + +
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
G + I C++G +A ++L VS G R W ++S
Sbjct: 556 VDGKSPDEITMNMIILAYCKQGKAERAAQMLDL-----VSCGRRKWRPDVIS 602
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 128/310 (41%), Gaps = 30/310 (9%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
+ +P AY+ +++ + SV H+E E +P I+TY
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHME--EIGCSPN------IRTYGSL---- 393
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+N F K R + G A+ I N M+ G C + + ++ ++C E L
Sbjct: 394 --INGFAK----RGSLDG-AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL-- 444
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG-IKPDIVCYTMVLNGVI 252
++ M K + + I+ L ++ A + QM+ P+IV Y +L+G+
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLA 504
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A L E+ + G+ TYN ++G C ++++ M G PD I
Sbjct: 505 KANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEI 564
Query: 313 TYNTLLQALCKVRELNRLRELVK-----EMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
T N ++ A CK + R +++ KW+ V+ +Y+ +I GL +
Sbjct: 565 TMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI---SYTNVIWGLCRSNCREDGVI 621
Query: 368 LLEEALNKGL 377
LLE ++ G+
Sbjct: 622 LLERMISAGI 631
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SL+ S NC P ++ IK L + + V +E++ + +L+
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 126 YADAHRFQDSVNLFYKI-----------------PKFRINRVGFAIEILNCMINDGFCVD 168
A A+R +++ L +I G A++++ M+ DG D
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 169 GKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
T ++I+ + C+Q + + ++L V ++ + ++ YTNVI L + D +
Sbjct: 563 EITMNMIILAYCKQGKAERAAQMLDLVSCGRR-KWRPDVISYTNVIWGLCRSNCREDGVI 621
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+L +M S GI P I +++++N I+ +D V+A + F
Sbjct: 622 LLERMISAGIVPSIATWSVLINCFIL-DDIVRAHDQF 657
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 24/249 (9%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C P Y +++ L +S+F + S+++ I +EN F IK DA R +
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIE-IMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+F ++ + +R I N ++ DG + +E G +
Sbjct: 477 EKVFRQMEQ--QHRCPPNIVTYNELL-DGLAKANRI----------------EEAYGLTR 517
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
E+ G + Y ++ AL ++ +M DG PD + M++ Q
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577
Query: 256 DYVKAEELFDELLVLG---LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A ++ D L+ G PDV +Y I GLC+ N E G+ ++ M G P +
Sbjct: 578 KAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIA 636
Query: 313 TYNTLLQAL 321
T++ L+
Sbjct: 637 TWSVLINCF 645
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 142/275 (51%), Gaps = 4/275 (1%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV-QEMKKLGFCFGMVD 208
+G A++++N M +G + T + +L C++ L E G+V EM GF ++
Sbjct: 396 MGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQL---EEAGYVLNEMSAKGFELNIMG 452
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++R+L K KV AL +L +M G KPDI + ++ G+ + A L+ ++L
Sbjct: 453 YNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDML 512
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ G++ + TYN I+ + ++ +K++ M G D ITYN L++A CK+
Sbjct: 513 LDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATE 572
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ L EM K +V + + +++I+GL G + A LL + +++GL ++ I
Sbjct: 573 KALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLI 632
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G +R+A L ++ + + P A + L+
Sbjct: 633 NGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLI 667
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 168/395 (42%), Gaps = 53/395 (13%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+ YH +I L +F I +L I K E E +FI ++K Y A+ + +
Sbjct: 103 DVYHVLIDKLGAAKEFKVIDKLLLQI-KEEGIAFRESLFICIMKYYGRANLPGQATRMLL 161
Query: 141 KI-------PKFRINRVGFAIEI-LNC----------MINDGFCVDGKTCSLILSSVCEQ 182
+ P F+ V I + NC M++ G T +++ ++C
Sbjct: 162 DMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMV 221
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
++ D +++M K G V Y +I +L K+++V +AL +L +M G PD+
Sbjct: 222 NEV--DNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVD 279
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV---------- 292
+ V+ G+ + +L D +L G P+ TY V +NGLC+ V
Sbjct: 280 TFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV 339
Query: 293 ----------------------EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
EA + M + G +PDV T+NTL+ LCK +
Sbjct: 340 PTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSA 399
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
++V +M G NL TY+ ++DG K + EA +L E KG ++ +
Sbjct: 400 VDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRA 459
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
LC+ G V KAL++L +M+DK P + L+
Sbjct: 460 LCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFG 494
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 180/409 (44%), Gaps = 50/409 (12%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL + + C P Y +I L++ + ++ L +E+ + L+
Sbjct: 229 SLLRDMTKHGCVPNSVVYQTLIHALSKRDR---VNEALKLLEE-----------MFLMGC 274
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
D F D + Y + R+NR+ ++++ M+ GF + T ++++ +C +
Sbjct: 275 LPDVDTFNDVI---YGLC--RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKV 329
Query: 186 SSDELL-----------------GFVQ-------------EMKKLGFCFGMVDYTNVIRS 215
++L G+V+ +M K G + + +I
Sbjct: 330 DEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHG 389
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L KK + A+ ++N M ++G P+++ YT +L+G + +A + +E+ G +
Sbjct: 390 LCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELN 449
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ YNV + LCK V + M+ M + G KPD+ T+NTL+ LCKV L +
Sbjct: 450 IMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYR 509
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
+M G++ N TY+ +I G I EA L+ + L +G ++ I C+ G
Sbjct: 510 DMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLG 569
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
KAL L +M KD+ P + + LL++ + ++ V + L D I
Sbjct: 570 ATEKALGLFDEMVRKDLVP-SNISCNLLINGLCRVGKVCNALELLRDMI 617
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 164/390 (42%), Gaps = 55/390 (14%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL +Y CEP ++Y+ V+ L +S+ + +E I + T+
Sbjct: 160 LLDMKGVYCCEPTFKSYNVVLDIL--------VSANCPSVAANVFYEMLSKGVIPTVYTF 211
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ +N V A +L M G CV L +RD
Sbjct: 212 GVVMK-----------ALCMVNEVDNACSLLRDMTKHG-CVPNSVVYQTLIHALSKRD-R 258
Query: 187 SDELLGFVQEMKKLGFCFGMVD-YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+E L ++EM +G C VD + +VI L + ++ + ++++M G P+ + Y
Sbjct: 259 VNEALKLLEEMFLMG-CLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYG 317
Query: 246 MVLNGV-------------------------IVQEDYVKAEE-------LFDELLVLGLV 273
+++NG+ I+ YVK+ L+D+++ G
Sbjct: 318 VLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCR 377
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PDV+T+N I+GLCK+ + + + M+ M G P++ITY TLL CK +L +
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYV 437
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ EM KG LN+ Y++++ L G + +A +L E +KG F+ I GLC+
Sbjct: 438 LNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCK 497
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
AL L + M V + L+
Sbjct: 498 VDRKEDALALYRDMLLDGVIANTVTYNTLI 527
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 5/213 (2%)
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P Y +VL+ ++ A +F E+L G++P VYT+ V + LC N V+
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M + G P+ + Y TL+ AL K +N +L++EM G + ++ T++ +I GL
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
I E L++ L +G + + GLC+ G V +A LL ++ +
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPN-----D 344
Query: 418 VWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
V +L++ K ++ + L D+++ C+
Sbjct: 345 VHFTILINGYVKSGRLDEANAFLYDKMIKNGCR 377
>gi|357450481|ref|XP_003595517.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484565|gb|AES65768.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1705
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 140/283 (49%), Gaps = 35/283 (12%)
Query: 147 INRVGFAIEILNCMIN---------------DGFCVDGKTCSLILSSVCEQRDLSSDELL 191
+ R+GFA I +N G+ +D T +++++C++R+ + L
Sbjct: 1372 LRRMGFAFSIFGLCLNGQIDNAMEFHEKLVAQGYQLDHLTYGTLINALCKRRETGAAVFL 1431
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM---KSDGIKPDIVCYTMVL 248
+++ ++ +V Y +I SL K+ +V DA + N+M + + PD+V Y
Sbjct: 1432 --LRQAERENVSLNVVTYNPIIDSLCKENRVTDAFDLFNEMVLKYNTSLLPDVVTY---- 1485
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE-AGIKMIACMEELGS 307
KA EL DE+++ + PDVYT+ + + LCK+ NVE A I + M ++G
Sbjct: 1486 ----------KASELLDEMVLKNIKPDVYTFGIMVEALCKEGNVEEAKIVIDEMMVQVGV 1535
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDV +N+ + + + +++ M +G+V N+ Y++MI GL + EA
Sbjct: 1536 EPDVAIFNSFIDGCFPSNQPDMAKDIFDSMDQRGVVPNIHNYTMMIKGLCKIKRVDEALN 1595
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
L EE +K + + ++ I GL + G AL+L+ +M DK
Sbjct: 1596 LFEEMRSKNMTPDAKIYTSIIDGLFKSGRDTCALKLVGEMHDK 1638
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NRV A ++ N M V SL+ V + DE++ ++ +K + FG++
Sbjct: 1458 NRVTDAFDLFNEM------VLKYNTSLLPDVVTYKASELLDEMV--LKNIKPDVYTFGIM 1509
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ +L K+ V +A ++++M G++PD+ + ++G A+++FD
Sbjct: 1510 -----VEALCKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSFIDGCFPSNQPDMAKDIFDS 1564
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+VP+++ Y + I GLCK V+ + + M PD Y +++ L K
Sbjct: 1565 MDQRGVVPNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAKIYTSIIDGLFKSGR 1624
Query: 327 LNRLRELVKEMKWKGIVLNLQTYS 350
+LV EM KG+ N+ T S
Sbjct: 1625 DTCALKLVGEMHDKGLPTNVFTKS 1648
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK-IPKFRI----NRVGF-AIEILNCMI 161
+REN + +I + +R D+ +LF + + K+ + V + A E+L+ M+
Sbjct: 1436 ERENVSLNVVTYNPIIDSLCKENRVTDAFDLFNEMVLKYNTSLLPDVVTYKASELLDEMV 1495
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
D T +++ ++C++ ++ +++ + M ++G + + + I +
Sbjct: 1496 LKNIKPDVYTFGIMVEALCKEGNVEEAKIV-IDEMMVQVGVEPDVAIFNSFIDGCFPSNQ 1554
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
A I + M G+ P+I YTM++ G+ + +A LF+E+ + PD Y
Sbjct: 1555 PDMAKDIFDSMDQRGVVPNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAKIYTS 1614
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL-CKVRELN 328
I+GL K +K++ M + G +V T + L L C ++ N
Sbjct: 1615 IIDGLFKSGRDTCALKLVGEMHDKGLPTNVFTKSDLDHLLTCDIKPQN 1662
>gi|449434360|ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207147 [Cucumis sativus]
Length = 2802
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 187/417 (44%), Gaps = 34/417 (8%)
Query: 1 MVRSSALKRANLH-LRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQ-QIP 58
M SS +R LH L H + P +P K + +L K++ K TP T + + Q
Sbjct: 858 MSSSSPFRR--LHCLFNHSRSP-APAFNKPNLSLSSLATKKSKKSPTATPLTDENRLQKL 914
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
Q I++S F N + Y ++ LA +F I +++ +K + + F+
Sbjct: 915 VQRFIINSESKQFRRKN-----DTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFV 969
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRV--GFAIEILNCMINDGFCVDGKTCSLIL 176
I LI+ Y A F + LF ++P+ + R F +++C+ + F K +
Sbjct: 970 -IRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVP 1028
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + D+SS Y VI + + + A+ N M+ +G
Sbjct: 1029 QELSIEADVSS---------------------YNIVINAYCEMDDFDKAILFFNHMEKNG 1067
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++PD+V + +L + + ++ E ++ + + PD+ +YN + G+ ++ GI
Sbjct: 1068 MEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGI 1127
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++A MEE KPDV YNTL+ + CK +L ++ ++K + N TY ++ L
Sbjct: 1128 ELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLL 1187
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
KGD L +EA+NK ++ + GL + +A +LLK+M +S
Sbjct: 1188 CEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLLKKMFSSSLS 1244
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 181/405 (44%), Gaps = 25/405 (6%)
Query: 4 SSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHI 63
SS+L R + H + P S + K + +L ++ K + TP T ++ +I
Sbjct: 1240 SSSLSRRLHGIFNHSRSPTSRFN-KSNPSLPSSATQKCNKSTAATPLTAEEHL----QNI 1294
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
+ + + Y ++ LA +F I +++ +K E+ + F LI
Sbjct: 1295 VDKFIKNTESQRFRHQKGTYDSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFA-TRLI 1353
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
K Y A F + LF ++P+ R K+ + +L+S + +
Sbjct: 1354 KLYGKAGMFSHARKLFDELPELNCERTV------------------KSFNSLLASCVKSK 1395
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+L E + F + +++ ++ Y VI + + + + A+ + M+ +G++P++V
Sbjct: 1396 ELDQVEKI-FREVPQEVSIKADVISYNIVINAFCEMDALDKAILFFHDMEKNGMEPNLVT 1454
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+ +L + + + E ++ + + PD+ +YN + G+ + ++ GI+++A ME
Sbjct: 1455 FNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYNARLRGMVLEKRIQDGIELLAKME 1514
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E KPDV +YN L++ C+ +L ++ ++K + TY I++ L +GD
Sbjct: 1515 EKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKESEVDPIATTYRILLPLLCEQGDFD 1574
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
L +EA++KG ++ + GL + +A +L + A
Sbjct: 1575 SGLQLCKEAIDKGFVFHTAEVQRVVDGLAEVSKTEEAKDLSRLTA 1619
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 169/368 (45%), Gaps = 18/368 (4%)
Query: 43 KQSLTTPPTKQQ--QQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDIS 100
K + TP T +Q Q++ K+ I +S F N + Y ++ LA + +F I
Sbjct: 1677 KSTAATPLTSEQGLQKLVKR-FIKNSESEKFRRKN-----DTYFSTVRLLAIHKKFSMIE 1730
Query: 101 SVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCM 160
+++ +K E + F I LIK Y A F + LF ++P+ R ++ N +
Sbjct: 1731 DIIEAQKKYEEIKEEGFA-IRLIKLYGKAGMFSHARKLFDELPELNCERT---VKSFNAL 1786
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSS---DELLGFVQEM-KKLGFCFGMVDYTNVIRSL 216
+ C + K + + E +S D+L +E+ +++ +V Y VI +
Sbjct: 1787 LTS--CANSKEFEQLETMFREVPCANSKEFDQLETIFREVPQEVSIEADVVSYNIVINAY 1844
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K + A+ N M+ +G +P++V + +L + + ++ E ++ + + PD+
Sbjct: 1845 CKMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWARMENKNIAPDL 1904
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
+YN + + + ++ GI+++A MEE KP+V +Y L++ C+ +L + ++ +
Sbjct: 1905 ISYNARLQRMVLEKRIQDGIQLLAEMEEKAIKPNVDSYYILIEGFCEDGDLEQAKQWYYK 1964
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
+K + N Y ++ KGD L +E+ + GL + + GL +
Sbjct: 1965 LKDNEVNPNASIYRTLLPLYCEKGDFDSGLRLCKESFDNGLVFLAEEVQRVVDGLIEVSK 2024
Query: 397 VRKALELL 404
+ +A +L+
Sbjct: 2025 IEEAKDLV 2032
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 111/238 (46%), Gaps = 7/238 (2%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
E+K+ GF ++ + K+FD L L ++ + + +L + +
Sbjct: 962 EIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERT------VRSFNALLVSCVKSK 1015
Query: 256 DYVKAEELFDEL-LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
++ + E++F E+ L + DV +YN+ IN C+ ++ + I ME+ G +PD++T+
Sbjct: 1016 EFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTF 1075
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTLL AL + + + M+ K I +L +Y+ + G+ I + LL +
Sbjct: 1076 NTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEE 1135
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
K + +++ I C+ G + +A + ++ + +V P A + LL K DF
Sbjct: 1136 KEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDF 1193
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 25/257 (9%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+E+K+ GF ++ K+FD L LN ++ + + +L
Sbjct: 1740 EEIKEEGFAIRLIKLYGKAGMFSHARKLFDELPELNCERT------VKSFNALLTSCANS 1793
Query: 255 EDYVKAEELFDEL------------LVLGLVP-------DVYTYNVYINGLCKQNNVEAG 295
+++ + E +F E+ + VP DV +YN+ IN CK ++
Sbjct: 1794 KEFEQLETMFREVPCANSKEFDQLETIFREVPQEVSIEADVVSYNIVINAYCKMGALDKA 1853
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
I ME+ G++P+++T+NTLL AL + + M+ K I +L +Y+ +
Sbjct: 1854 ILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWARMENKNIAPDLISYNARLQR 1913
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+ + I + LL E K + + I G C+ G + +A + ++ D +V+P
Sbjct: 1914 MVLEKRIQDGIQLLAEMEEKAIKPNVDSYYILIEGFCEDGDLEQAKQWYYKLKDNEVNPN 1973
Query: 416 ARVWEALLLSSVSKLDF 432
A ++ LL K DF
Sbjct: 1974 ASIYRTLLPLYCEKGDF 1990
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 16/255 (6%)
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
K SLI + Q+ ++ GF + KL GM + K+FD L L
Sbjct: 1325 KKFSLIEDIIEAQKKYEDIKVEGFATRLIKLYGKAGMFSHA---------RKLFDELPEL 1375
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL-LVLGLVPDVYTYNVYINGLCK 288
N ++ + + +L + ++ + E++F E+ + + DV +YN+ IN C+
Sbjct: 1376 NCERT------VKSFNSLLASCVKSKELDQVEKIFREVPQEVSIKADVISYNIVINAFCE 1429
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ ++ I ME+ G +P+++T+NTLL AL + + + M+ K I +L +
Sbjct: 1430 MDALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVS 1489
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ + G+ + I + LL + K + ++ I G CQ G + +A + ++
Sbjct: 1490 YNARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLK 1549
Query: 409 DKDVSPGARVWEALL 423
+ +V P A + LL
Sbjct: 1550 ESEVDPIATTYRILL 1564
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 137/267 (51%), Gaps = 20/267 (7%)
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
+ +D++ L +K+ IN + IL D FC +GK V E +++
Sbjct: 259 QLKDAIGLLHKMILENINPTVYTFSILV----DAFCKEGK--------VKEAKNV----- 301
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
FV MKK +V Y +++ +V A I N M G+ PD+ Y+++++G
Sbjct: 302 --FVVMMKK-DVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISG 358
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ +A +LF+E+ + PDV TYN I+GLCK + +K+I M + G P+
Sbjct: 359 FCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPN 418
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+ITYN+LL ALCK +++ EL+ ++K I ++ TY+I+I+GL G + +A + E
Sbjct: 419 IITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFE 478
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLV 397
+ L G ++ I G C++G V
Sbjct: 479 DVLVNGYNIDVYTYNTMIKGFCKKGFV 505
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 132/264 (50%), Gaps = 9/264 (3%)
Query: 167 VDGKTCSL-------ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
+DGK L I+ VC +D ++ F EM C +V Y +I L
Sbjct: 200 IDGKLVRLDVVMYNTIIDGVC--KDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIM 257
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ DA+G+L++M + I P + ++++++ + +A+ +F ++ + P++ TY
Sbjct: 258 GQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTY 317
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N +NG C N V + M ++G PDV +Y+ ++ CK++ ++ +L +EM
Sbjct: 318 NSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHC 377
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
K I ++ TY+ +IDGL G I A L+ E ++G ++ + LC+ V K
Sbjct: 378 KQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDK 437
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A+ELL ++ D ++ P + L+
Sbjct: 438 AIELLTKLKDHNIQPSVCTYNILI 461
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 166/384 (43%), Gaps = 58/384 (15%)
Query: 94 SQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRV 150
SQ ++ S +H+ ++N TP I F ++ + A+ + V+L ++ I N V
Sbjct: 47 SQLHNLVSSFNHLLHQKN-PTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLV 105
Query: 151 GFAIEILNC----------------MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+I ++NC ++ G+ D T + ++ +C + D+ + L F
Sbjct: 106 TLSI-LINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDI--HKALHFH 162
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++ LGF V Y +I L K + AL +L ++ ++ D+V Y +++GV
Sbjct: 163 DKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKD 222
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGL---------------------------- 286
+ A + + E++ + P V TYN I GL
Sbjct: 223 KLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTF 282
Query: 287 -------CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
CK+ V+ + M + KP+++TYN+L+ C V E+N+ + M
Sbjct: 283 SILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQ 342
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ ++ +YSIMI G + EA L EE K + ++ I GLC+ G +
Sbjct: 343 IGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISY 402
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL+L+ +M D+ P + +LL
Sbjct: 403 ALKLIGEMHDRGQPPNIITYNSLL 426
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 112/202 (55%), Gaps = 6/202 (2%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
++ ++ + K+ KV +A + M +KP+IV Y ++NG + + KAE +F+ +
Sbjct: 282 FSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMA 341
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK---PDVITYNTLLQALCKVR 325
+G+ PDV++Y++ I+G CK V+ +K+ EE+ K PDV+TYN+L+ LCK
Sbjct: 342 QIGVAPDVHSYSIMISGFCKIKMVDEAMKL---FEEMHCKQIFPDVVTYNSLIDGLCKSG 398
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L+ EM +G N+ TY+ ++D L + +A LL + + + ++
Sbjct: 399 RISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYN 458
Query: 386 ETICGLCQRGLVRKALELLKQM 407
I GLC+ G ++ A ++ + +
Sbjct: 459 ILINGLCKSGRLKDAQKVFEDV 480
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 161/351 (45%), Gaps = 43/351 (12%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLI----KTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
++V+ + K N E + ++I K+ D + +N FY R +R+ A
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFY-----RASRIREACA 190
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
M G D TC++++S +C+ D+ +E L + MK G ++ Y ++I +
Sbjct: 191 FREKMKAAGINPDVLTCNILVSGICKDGDV--EEALEILDGMKLAGPVPDVITYNSIIHA 248
Query: 216 LVKKEKVFDA--------------------------------LGILNQMKSDGIKPDIVC 243
L KV +A L +L +M + I PD++
Sbjct: 249 LCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVIT 308
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT+++NG+ A L +E++ G +PDV Y ++GLCK +E K++ M
Sbjct: 309 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 368
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G + V+ Y++L+ C+ +++ RE++ EM +V L TY+I++ GL G I
Sbjct: 369 VRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 428
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+A L+ + + +G ++ I GLC+ VR+A +L +MA + P
Sbjct: 429 KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFP 479
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 136/287 (47%), Gaps = 2/287 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ +V A +L ++ G+ D + ++ +C+ ++ +E V+EM G G
Sbjct: 318 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI--EEAHKLVKEMSVRGCRTG 375
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y++++ + V A IL +M S + P + Y +VL G+I KA L
Sbjct: 376 VVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 435
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L+ G VPDV TYN I+GLCK N V + M G P+ +T +++ LC+V
Sbjct: 436 DLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVG 495
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ LV EM K N+ Y+ +IDGL + +AC +L+ +G+ +
Sbjct: 496 RVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYR 555
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ I + G V +A+ + +M + P + L +++S F
Sbjct: 556 KLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVF 602
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 2/209 (0%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G+ + Y +++ LVK F + + G P++V + +++ G ++A
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
E L + PDVY +NV I+GL K N + +K+ ME KP+++TYNT++
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 321 LCKVRELNRLRELVKEMKWKG--IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCK L + REL++EM KG ++ TY+ +I+ I EAC E+ G+
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQM 407
+ + G+C+ G V +ALE+L M
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGM 230
>gi|297832386|ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329915|gb|EFH60334.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 462
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 24/328 (7%)
Query: 122 LIKTYADAHRFQDSVNLFYKI----PKFRINRVGFAI-----------------EILNCM 160
++++YA D+V LF I P FR R F I +LN M
Sbjct: 90 VLQSYASIAAVDDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLM 149
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
+N+G D T + + S+CE + DE ++E+ + Y +++ L K +
Sbjct: 150 VNNGLEPDQVTTDIAVRSLCETGRV--DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 207
Query: 221 KVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +++M+ D +KPD+V +T++++ V ++ +A L +L G PD + Y
Sbjct: 208 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 267
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + G C + I + M+E G +PD ITYNTL+ L K + R +K M
Sbjct: 268 NTIMKGFCTLSKGSEAIGVYKKMKEEGVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVD 327
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G + TY+ +++G+ KG+ + A LLEE +G ++ + GLC+ L+ K
Sbjct: 328 AGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDK 387
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSV 427
+EL + M V + L+ S V
Sbjct: 388 GMELYELMKSSGVKLETNGYATLVRSLV 415
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ +VC ++L E + V ++ GF Y +++ K +A+G+ +M
Sbjct: 233 TILIDNVCNSKNLR--EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKM 290
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K +G++PD + Y ++ G+ +A ++ G PD TY +NG+C++
Sbjct: 291 KEEGVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 350
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ ME G P+ TYNTLL LCK R +++ EL + MK G+ L Y+ +
Sbjct: 351 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYELMKSSGVKLETNGYATL 410
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ L G + EA + + A++ T +S +
Sbjct: 411 VRSLVKSGKVAEAYEVFDYAVDSKSLTDASAY 442
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 132/251 (52%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ I+ +C+ + + D+ L +EM+ G +V Y+++I L + DA +L+ M
Sbjct: 260 TTIIDGLCKNKHM--DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I PD+ ++ +++ + + V+AE+L+DE++ + P + TY+ ING C + +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ +M M PDV++Y+TL++ CK + ++ EL +EM +G+V N TY+ +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I GL GD A + +E ++ G+ ++ + GLC+ G + KA+ + + + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 413 SPGARVWEALL 423
P + ++
Sbjct: 498 EPTIYTYNIMI 508
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N G + T S++++ C + L L + +M KLG+
Sbjct: 93 KMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPL--ALAVLGKMMKLGYEPN 150
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++++ +++ +A+ +++QM G +P+ V + +++G+ + +A L D
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALID 210
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G PD+ TY V +NGLCK+ + + ++ ME+ +P V+ Y T++ LCK +
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNK 270
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L KEM+ KGI N+ TYS +I L + G +A LL + + + + F
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 330
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G + +A +L +M + + P + +L+
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 146/335 (43%), Gaps = 39/335 (11%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P Y +I L ++ D S +L D IE++ N + F F LI + + ++
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV--FTFSALIDAFVKEGKLVEA 345
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVD--------------GKTC-------SL 174
L+ ++ K I+ +I + +IN GFC+ K C S
Sbjct: 346 EKLYDEMVKRSIDP---SIVTYSSLIN-GFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ C+ + + DE + +EM + G V YT +I+ L + A I +M S
Sbjct: 402 LIKGFCKAKRV--DEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS 459
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
DG+ P+I+ Y +L+G+ KA +F+ L + P +YTYN+ I G+CK VE
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
G + + G KPDV+ YNT++ C+ L KEMK G + N Y+ +I
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 355 GLASKGDI---------IEACGLLEEALNKGLCTQ 380
GD + +CG +A GL T
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ + T S +L+ C + +S E + V +M G+
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS--EAVALVDQMFVTGYQPN 185
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V + +I L K +A+ ++++M + G +PD+V Y +V+NG+ + D A L +
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLN 245
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ L P V Y I+GLCK +++ + + ME G +P+V+TY++L+ LC
Sbjct: 246 KMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I ++ T+S +ID +G ++EA L +E + + + +
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A ++ + M K P + L+
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLI 403
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 170/394 (43%), Gaps = 60/394 (15%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C+P Y V+ L + D++ +L + ++ E I+ +I D
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGD-TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDD 274
Query: 135 SVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG 192
++NLF ++ R N V ++ +++C+ N G D S +LS + E R ++ D
Sbjct: 275 ALNLFKEMETKGIRPNVVTYS-SLISCLCNYGRWSDA---SRLLSDMIE-RKINPD---- 325
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ ++ +I + VK+ K+ +A + ++M I P IV Y+ ++NG
Sbjct: 326 -------------VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG------ 306
+ + +A+++F+ ++ PDV +Y+ I G CK V+ G+++ M + G
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 307 -----------------------------SKPDVITYNTLLQALCKVRELNRLRELVKEM 337
P+++TYNTLL LCK +L + + + +
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ + + TY+IMI+G+ G + + L KG+ ++ I G C++G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+A L K+M + P + + L+ + + D
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 104/210 (49%)
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R+ + + K+ DA+ + +M P I+ ++ +L+ + + L +++ LG+
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
+ YTY++ IN C+++ + + ++ M +LG +P+++T ++LL C + ++ L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V +M G N T++ +I GL EA L++ + KG + + GLC+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
RG A LL +M + PG ++ ++
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTII 263
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 114/240 (47%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+L D+ + EM K +++++ ++ ++ K K + + QM++ G+ +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y++++N + A + +++ LG P++ T + +NG C + + ++ M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G +P+ +T+NTL+ L + + L+ M KG +L TY ++++GL +GD
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL + L ++ I GLC+ + AL L K+M K + P + +L+
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 136/272 (50%), Gaps = 6/272 (2%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
F EIL C G+ ++++ C++ D+ L + K G +V +
Sbjct: 127 FYKEILEC----GYPASLYFFNILMHRFCKEGDIRV--ALSVFDAITKWGLRPSVVSFNT 180
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+L G
Sbjct: 181 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG 240
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
LVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L + +
Sbjct: 241 LVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQ 300
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L+ EM+ KG+ + +Y+ +IDG +GD+ A + + + + + I GL
Sbjct: 301 DLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 360
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
CQ G A ++L++M + P + ++
Sbjct: 361 CQEGRSIDAEKMLREMLSVGLRPDTGTYTMII 392
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M G D T S++++ +C++ + D+ EM G
Sbjct: 187 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDKGLVPN 244
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ + QM S + PD++ Y ++ G+ + D +A++L D
Sbjct: 245 GVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLID 304
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +Y I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 305 EMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEG 364
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 365 RSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 415
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 102/203 (50%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M++ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 229 ANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRV--DLAMEVYKQMLSQSLSPDLITYNTL 286
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M+ G+KPD + YT +++G + D A E ++ +
Sbjct: 287 IYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENI 346
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G +PD TY ++ CK ++ +
Sbjct: 347 RLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSK 406
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 407 LLKEMQRDGHVPSVVTYNVLMNG 429
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 2/270 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI+++ MI G D + + ++SS+C + ++ + V +M++ G+ V Y ++
Sbjct: 116 AIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYA--MQLVDKMEEYGYPTNTVTYNSL 173
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+R L + +L +L+++ G+ P+ Y+ +L + +A +L DE++ G
Sbjct: 174 VRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG 233
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ +YNV + GLCK+ E I++ + G P+V++YN LL++LC
Sbjct: 234 EPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANV 293
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ EM + TY+I+I LA G A +LEE + +S ++ I LC
Sbjct: 294 LLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLC 353
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ G + ++ L QM + +P + A+
Sbjct: 354 KDGKLDLVVKCLDQMMYRHCNPNEGTYNAI 383
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%)
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K+ ++ DA L M G KPD+ T +L + KA ++ + ++ G++PD
Sbjct: 74 KELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDAS 133
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
+Y ++ LC++ NV ++++ MEE G + +TYN+L++ LC L + +L+ +
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
KG+V N TYS +++ + EA LL+E + KG ++ + GLC+ G
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRT 253
Query: 398 RKALELLKQMADKDVSPGARVWEALLLS 425
A+ L +++ K SP + LL S
Sbjct: 254 EDAIRLFRELPSKGFSPNVVSYNILLRS 281
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 6/244 (2%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT ++ SL +K V A+ ++++M+ G + V Y ++ G+ + + ++ +L D L
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ GLVP+ YTY+ + K+ + K++ + G +P++++YN LL LCK
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRT 253
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
L +E+ KG N+ +Y+I++ L ++G EA LL E + ++
Sbjct: 254 EDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNIL 313
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
I L G ALE+L++M P A + ++ L KLD V ++ +DQ++
Sbjct: 314 IGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLV----VKCLDQMM 369
Query: 446 NTPC 449
C
Sbjct: 370 YRHC 373
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T ++ L K K+ A+ ++ M GI PD YT +++ + + + A +L D++
Sbjct: 101 TQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEE 160
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G + TYN + GLC N+ ++++ + + G P+ TY+ LL+A K R +
Sbjct: 161 YGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADE 220
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+L+ E+ KG NL +Y++++ GL +G +A L E +KG ++ +
Sbjct: 221 ASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLR 280
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
LC G +A LL +M + SP + L+ S
Sbjct: 281 SLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGS 316
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 37/307 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
++++L+ +I G + T S +L + ++R +DE + E+ G +V Y +
Sbjct: 186 SLQLLDRLIQKGLVPNAYTYSFLLEAAYKER--GADEASKLLDEIIAKGGEPNLVSYNVL 243
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K+ + DA+ + ++ S G P++V Y ++L + + + +A L E+
Sbjct: 244 LTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDER 303
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P TYN+ I L E ++++ M KP +YN ++ LCK +L+ + +
Sbjct: 304 SPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVK 363
Query: 333 LVKEMKWKGIVLNLQTYS----------------------------------IMIDGLAS 358
+ +M ++ N TY+ I+I L
Sbjct: 364 CLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCR 423
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
KG+ A LL E G S + I GLC G++ +A+E+ M + + P
Sbjct: 424 KGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTEN 482
Query: 419 WEALLLS 425
+ +L+L
Sbjct: 483 YNSLILG 489
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R A+E+L MI F + + I++ +C +D D ++ + +M C
Sbjct: 322 RTEHALEVLEEMIRARFKPTASSYNPIIAHLC--KDGKLDLVVKCLDQMM-YRHCNPNEG 378
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
N I +L ++ V +A I+ + + Y +V+ + + + A +L E+
Sbjct: 379 TYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMT 438
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD +TY+ I GLC + + I++ + MEE +KPD YN+L+ CK R +
Sbjct: 439 KYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NNKPDTENYNSLILGCCKSRRTD 497
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
++ + M KG + N TY+I+++G+ + ++ A +L E + + +QS++
Sbjct: 498 LALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTL 552
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 119/221 (53%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ MK GF +V Y +I SL + K+ AL +L+Q+ D P ++ YT+++ IV
Sbjct: 160 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIV 219
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ +A +L +E+L GL+PD+YTYN I G+CK+ + G K++A M G +P+ +T
Sbjct: 220 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVT 279
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y+ L+ +LC+ ++ ++K M K + + +Y +I L +G + A G+++ +
Sbjct: 280 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 339
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ G ++ + LC+ G +ALE+ ++ P
Sbjct: 340 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 380
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 118/219 (53%), Gaps = 2/219 (0%)
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K K ++L L + + G PD++ T ++ G ++ KA + E+L PDV+
Sbjct: 80 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVF 138
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
YN I+G CK N +EA +++ M+ G PD++TYN ++ +LC R+L +++ ++
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ + TY+I+I+ +G I EA LLEE L +GL ++ I G+C+ G+
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMW 258
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ +L+ +M + P +V ++L+SS+ + ++ +
Sbjct: 259 DEGEKLVAEMFSRGCEPN-KVTYSILISSLCRFGRIDEA 296
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 3/273 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
++ L C++N G+ D C+ ++ +++ + + E F Y V
Sbjct: 87 SLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFA---YNAV 143
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K ++ A +LN+MK+ G PDIV Y +++ + + A ++ D+LL+
Sbjct: 144 ISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNC 203
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P V TY + I + + +K++ M G PD+ TYN +++ +CK + +
Sbjct: 204 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEK 263
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LV EM +G N TYSI+I L G I EA +L+ + K L + +D I LC
Sbjct: 264 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 323
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G + A+ ++ M P + +L +
Sbjct: 324 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAA 356
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 131/264 (49%), Gaps = 7/264 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E L F++ + G+ ++ T +I+ + + A ++ ++S +PD+ Y V
Sbjct: 85 NESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH-TEPDVFAYNAV 143
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A ++ + + G +PD+ TYN+ I LC + + +K++ +
Sbjct: 144 ISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNC 203
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P VITY L++A +N +L++EM +G++ ++ TY+ +I G+ +G E
Sbjct: 204 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEK 263
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
L+ E ++G + I LC+ G + +A+ +LK M +K+++P ++ L+ L
Sbjct: 264 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 323
Query: 426 SVSKLDFVNTSFIRLVDQILNTPC 449
+LD I ++D +++ C
Sbjct: 324 KEGRLDLA----IGIMDYMISNGC 343
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++L M+ G D T + I+ +C++ E L V EM G V Y+ +
Sbjct: 226 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKL--VAEMFSRGCEPNKVTYSIL 283
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL + ++ +A+ +L M + PD Y +++ + + A + D ++ G
Sbjct: 284 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 343
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+PD+ YN + LCK N +++ + +G P+
Sbjct: 344 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 381
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 6/264 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL+P+ T+ I G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 242 GLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG +GD+ A + + + + I G
Sbjct: 302 HXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSP 414
LCQ G A ++L++M + P
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKP 385
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K G ++ G + + ++++ D A+ +FD + G
Sbjct: 113 VLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG++ N T++ +I G G + A + + L++ L ++ I GL
Sbjct: 233 ELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGL 292
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A L+ +M+ K + P + L+
Sbjct: 293 CKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLI 324
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLIPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I M S + PD++ Y ++ G+ + D +A L D
Sbjct: 247 GVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +TY I+G CK+ +++ K M + + D + Y L+ LC+
Sbjct: 307 EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ ++ TY+++I+ KGD+ + LL+E G
Sbjct: 367 RSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 417
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M++ D T + ++ +C++ DL L + EM G
Sbjct: 261 GRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXL--IDEMSMKGLKPDKF 318
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M I+ D V YT +++G+ + V AE++ E+
Sbjct: 319 TYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREM 378
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L +GL PD+ TY + IN CK+ +V G K++ M+ G P V+TYN L+
Sbjct: 379 LSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 152/315 (48%), Gaps = 5/315 (1%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F+ ++ + + L Y + KF N+ A+ ++ M+ G D + + ++
Sbjct: 84 FLHLEYLVGKGQKPEVNQATQLLYDLCKF--NKARKAVRVMEMMVGSGIIPDAASYTHLV 141
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C++ ++ + V++M+ GF V Y +++ L + +L +L+++ G
Sbjct: 142 NFLCKRGNVGY--AIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKG 199
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P+ Y+ +L + +A +L D+++ G P++ +YNV + GLCK+ E I
Sbjct: 200 LIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAI 259
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K+ + G P V+++N LL++LC EL+ EM + ++ TY+I+I L
Sbjct: 260 KLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITSL 319
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ G +A +L+E G ++ ++ I LC+ G V L+ L QM + P
Sbjct: 320 SLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNE 379
Query: 417 RVWEAL-LLSSVSKL 430
+ A+ +LS K+
Sbjct: 380 GTYSAISMLSEQGKV 394
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 109/208 (52%)
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K+ +++DA L + G KP++ T +L + KA + + ++ G++PD
Sbjct: 76 KELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAA 135
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
+Y +N LCK+ NV I+++ ME G + +TYNTL++ LC LN+ +L+ +
Sbjct: 136 SYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRL 195
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
KG++ N TYS +++ + + EA LL++ + KG ++ + GLC+ G
Sbjct: 196 TKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRT 255
Query: 398 RKALELLKQMADKDVSPGARVWEALLLS 425
+A++L +++ K SP + LL S
Sbjct: 256 EEAIKLFQELPVKGFSPSVVSFNILLRS 283
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 159/387 (41%), Gaps = 78/387 (20%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
DA + VN K R N VG+AI+++ M GF + T + ++ +C +L
Sbjct: 133 DAASYTHLVNFLCK----RGN-VGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNL-- 185
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
++ L + + K G Y+ ++ + K+ V +A+ +L+ + + G +P++V Y ++
Sbjct: 186 NQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVL 245
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L G+ + +A +LF EL V G P V ++N+ + LC + E +++A M++
Sbjct: 246 LTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQ 305
Query: 308 KPDVIT-----------------------------------YNTLLQALCKVRELNRLRE 332
P V+T YN ++ LCK +++ + +
Sbjct: 306 PPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLK 365
Query: 333 LVKEMKWKGIVLNLQTYSI----------------------------------MIDGLAS 358
+ +M + N TYS +I L
Sbjct: 366 CLDQMIHRRCHPNEGTYSAISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCR 425
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
KG+ A +L E G S + I G+C+ G++ +AL++ + + + D P
Sbjct: 426 KGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDN 485
Query: 419 WEALLLS--SVSKLDFVNTSFIRLVDQ 443
+ AL+L + D F+ +V++
Sbjct: 486 YNALILGFCKAQRTDLSIEIFLMMVNK 512
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 5/241 (2%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R A ++L+ M GF + + I++ +C++ + D +L + +M C
Sbjct: 324 RTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKV--DLVLKCLDQMIHRR-CHPNEG 380
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ I L ++ KV +A I+ + S P Y ++ + + + A ++ E+
Sbjct: 381 TYSAISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLYEMT 440
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD YTY+ I G+C++ ++ +K+ +EE +PD+ YN L+ CK + +
Sbjct: 441 KYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQRTD 500
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E+ M KG V N TY+I+++GLA + + A L++E K + +QS++ E +
Sbjct: 501 LSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKELYLKKVLSQSTV--ERL 558
Query: 389 C 389
C
Sbjct: 559 C 559
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 1/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI +V A E+ N M G D T + +++ C ++ L + + K
Sbjct: 249 RIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDL-LKELLSKNDLSPD 307
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT++I K K+ A + N M S GIKP+ + +++NG D V AE +++
Sbjct: 308 VVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYE 367
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L+LG PD+ T+ I+G C+ VE +K+ + P+ T+ L ALCK
Sbjct: 368 EMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKEN 427
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L+ R ++++KW+ IV Y+ +IDG G++ EA +L E K +
Sbjct: 428 RLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYT 487
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C +G + +A+ + +M +P + +L+
Sbjct: 488 ILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLI 525
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 138/310 (44%), Gaps = 54/310 (17%)
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT---NVIRSLV 217
+N C +T S +L S+ E +GF + K + C + ++ +V+ LV
Sbjct: 129 VNLNLCHSFRTYSFLLRSLSE---------MGFHESAKAVYDCMNIDGHSPDASVLGFLV 179
Query: 218 KKEKVFDALGILNQMKS--DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
DA G N ++ DG++ +V Y +LN ++ +A F E + L D
Sbjct: 180 SSAT--DA-GKFNIARTWVDGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFD 236
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
++N+ I GLC+ V+ ++ M G PDVITYNTL+ C+V E++R +L+K
Sbjct: 237 SCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLK 296
Query: 336 EMKWK------------------------------------GIVLNLQTYSIMIDGLASK 359
E+ K GI N T++I+I+G
Sbjct: 297 ELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKV 356
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
GD++ A + EE L G F I G C+ G V ++L+L ++ +++SP +
Sbjct: 357 GDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTF 416
Query: 420 EALLLSSVSK 429
A+L +++ K
Sbjct: 417 -AILTNALCK 425
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ N MI+ G + T +++++ + D+ S E +EM LG ++ +T++I
Sbjct: 330 LFNNMISSGIKPNAFTFNILINGFGKVGDMVSAE--NMYEEMLLLGCPPDIITFTSLIDG 387
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ KV +L + +++ + + P+ + ++ N + + +A +L +V
Sbjct: 388 HCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQ 447
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ YN I+G CK NV+ ++A MEE KPD ITY L+ C L+ +
Sbjct: 448 PFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFN 507
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE---EALNKGL 377
M G + T + +I L G EA +++ E N GL
Sbjct: 508 RMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASEDFNLGL 552
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 178/374 (47%), Gaps = 25/374 (6%)
Query: 54 QQQIPKQPHILSSLLHSFSIYNCEPPPE--AYHFVIKTLAENSQFCDISSVLDHIEKREN 111
++ +PK P ++ + + PPP + + ++ ++ + + + S+ H++ +
Sbjct: 27 RKTLPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGT 86
Query: 112 FETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT 171
P + + + F +S+ + ++G A ++ ++ GF VD T
Sbjct: 87 -PKPSLVTLSI---------FINSLT--------HLGQMGLAFSVMAKIVKRGFGVDPFT 128
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
+ ++ +C + + E L GF F V Y +I L K K DA+ +L +
Sbjct: 129 LTTLMKGLCLKG--RTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRK 186
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M+ G++P+++ Y MV++G+ + +A L E++ G+ DV+TYN I+G C
Sbjct: 187 MEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQ 246
Query: 292 VEAGIKMI--ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ ++++ M+E +PDV T+N L+ ALCK+ + R + M +G+ ++ +
Sbjct: 247 FQGAVRLLNEMVMKE-DVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSC 305
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ +++G +G + EA + + + +G + I G C+ +V +AL LL +M
Sbjct: 306 NALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQ 365
Query: 410 KDVSPGARVWEALL 423
+++ P + LL
Sbjct: 366 RNLVPDTVTYNCLL 379
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 178/416 (42%), Gaps = 56/416 (13%)
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
P ++S H S +P I +L Q SV+ I KR F F
Sbjct: 72 PTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKR-GFGVDPFTLT 130
Query: 121 DLIKTYADAHRFQDSVNLF-YKIPK-FRINRVGF---------------AIEILNCMIND 163
L+K R +++NL+ + + K F + V + AIE+L M
Sbjct: 131 TLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKG 190
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + ++++ +C++ ++ E G EM G C + Y ++I +
Sbjct: 191 GVRPNLIMYNMVVDGLCKEGLVT--EACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQ 248
Query: 224 DALGILNQM--KSD----------------------------------GIKPDIVCYTMV 247
A+ +LN+M K D G++PD+V +
Sbjct: 249 GAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNAL 308
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG ++ +A+E+FD ++ G +P+V +Y+ ING CK V+ ++++ M +
Sbjct: 309 MNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNL 368
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD +TYN LL L K + +LV+ M+ G +L TY++++D + + +A
Sbjct: 369 VPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALA 428
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + ++ G+ ++ I GLC+ G ++ A E+ + ++ K P R + ++
Sbjct: 429 LFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMI 484
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 140/297 (47%), Gaps = 22/297 (7%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKI-------PKF-----------RINRVGFAIEILN 158
F + LI + A +FQ +V L ++ P ++ V A +
Sbjct: 232 FTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFG 291
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
MI G D +C+ +++ C + +S + E+ + E KL ++ Y+ +I
Sbjct: 292 LMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLP---NVISYSTLINGYC 348
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K + V +AL +L +M + PD V Y +L+G+ + +L + + G PD+
Sbjct: 349 KVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLI 408
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYNV ++ K+ ++ + + + + G P++ TYN L+ LCK + +E+ + +
Sbjct: 409 TYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLL 468
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
KG N++TY+IMI+GL +G + EA LL E ++ G + FD + L ++
Sbjct: 469 SVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLEK 525
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 3/230 (1%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGI-KPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V ++ S++K + + + + + S G KP +V ++ +N + A +
Sbjct: 55 IVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVM 114
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ G D +T + GLC + + + G D + Y TL+ LCK+
Sbjct: 115 AKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKM 174
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ EL+++M+ G+ NL Y++++DGL +G + EACGL E + KG+C +
Sbjct: 175 GKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTY 234
Query: 385 DETICGLCQRGLVRKALELLKQMADK-DVSPGARVWEALLLSSVSKLDFV 433
+ I G C G + A+ LL +M K DV P + +L+ ++ KL V
Sbjct: 235 NSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFN-ILVDALCKLGMV 283
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 132/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ C++ L +E + EM G V Y +I +L K EKV DAL +
Sbjct: 444 TYTILIDRFCKEGRL--EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG 501
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M S G KPDI + ++ G+ + +A L+ ++L+ G++ + TYN I+ ++
Sbjct: 502 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 561
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ +K++ M G D ITYN L++ALC+ + + L ++M KG+ N + +
Sbjct: 562 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 621
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+I+GL G+I A L + +++GL ++ I GLC+ G ++AL L ++ +
Sbjct: 622 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 681
Query: 411 DVSPGARVWEALL 423
+ P A + L+
Sbjct: 682 GICPDAITYNTLI 694
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 111/220 (50%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ M +G + Y +I L KK + A ++N+M+ G +P+++ YT++++ +
Sbjct: 396 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 455
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A + DE+ GL + YN I+ LCK V+ + M M G KPD+ T+
Sbjct: 456 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 515
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N+L+ LCKV + L ++M +G++ N TY+ +I +G + EA L+ + L
Sbjct: 516 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 575
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+G ++ I LC+ G + K L L + M K ++P
Sbjct: 576 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 615
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 170/395 (43%), Gaps = 53/395 (13%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+ Y+ +I L +F ++L + K+E E +FI ++K Y A + L
Sbjct: 130 DVYYMLIDKLGAAGEFKTTDALLMQM-KQEGIVFRESLFILIMKHYGRAGLPGQATRLLL 188
Query: 141 KI-------PKFRINRVGFAIEIL-NC----------MINDGFCVDGKTCSLILSSVCEQ 182
+ P FR V + + NC M++ G T +++ ++C
Sbjct: 189 DMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLV 248
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
++ D +++M + G + Y +I +L K +V + L +L +M G PD+
Sbjct: 249 NEV--DSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVN 306
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV---------- 292
+ ++G+ +A +L D +L+ G P+ +TY V ++GLC+ V
Sbjct: 307 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 366
Query: 293 ----------------------EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
EA M M +G PD+ TYNTL+ LCK L
Sbjct: 367 PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 426
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
REL+ EM+ KG N+ TY+I+ID +G + EA +L+E KGL + ++ I
Sbjct: 427 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISA 486
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
LC+ V+ AL + M+ K P + +L+
Sbjct: 487 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 521
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 126/261 (48%), Gaps = 7/261 (2%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
V M GF Y ++ L + KV +A +LN++ + P++V + ++NG +
Sbjct: 327 LVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYV 382
Query: 253 VQEDYVKAEELFDE-LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ +A+ + E +L +G PD++TYN I GLCK+ + + +++ M+ G +P+V
Sbjct: 383 SRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNV 442
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
ITY L+ CK L R ++ EM KG+ LN Y+ +I L + +A + +
Sbjct: 443 ITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 502
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+KG F+ I GLC+ +AL L + M + V + L+ + + +
Sbjct: 503 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562
Query: 432 FVNTSFIRLVDQILNTPCKME 452
++LV+ +L C ++
Sbjct: 563 MQEA--LKLVNDMLFRGCPLD 581
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 15/240 (6%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G+C Y +I L + +L QMK +GI + +++ + Y +A
Sbjct: 124 GYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLF------ILIMKHYGRA 177
Query: 261 -------EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L D V P +YNV ++ L N + + M G P V T
Sbjct: 178 GLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYT 237
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
+ +++ALC V E++ L+K+M G V N Y +I L+ G + E LLEE L
Sbjct: 238 FGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEML 297
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
G + F++ I GLC+ + +A +L+ +M + +P + + L+ L + K+D
Sbjct: 298 LMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVD 357
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G + +C+++++ +C ++ L F+++M G +V Y ++I L K
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQ--HALEFLRDMIHRGLTPDIVTYNSLINGLCKT 665
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +AL + ++++ +GI PD + Y +++ + + A L + G +P+ T+
Sbjct: 666 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 725
Query: 280 NVYINGLCKQNNVE 293
+ ++ K+ + E
Sbjct: 726 YILVSNFIKEGDQE 739
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 125/235 (53%), Gaps = 14/235 (5%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG-----VIVQEDYV----- 258
++ +I + K+ K+ +A + M + +KP+IV Y +++G V+ + +
Sbjct: 225 FSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMI 284
Query: 259 ----KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A LF+E+ + PD+ YN I+GLCK +K I M G PD+ TY
Sbjct: 285 KMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTY 344
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N+LL ALCK +++ EL+ ++K +GI ++ TY+I+I+GL G + +A + E+ L
Sbjct: 345 NSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLV 404
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
KG T ++ I G C++GL + L ++ +M D SP A+ E ++ S K
Sbjct: 405 KGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDK 459
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 5/227 (2%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ + + G D + +T ++ G+ ++ + KA D+++ G + +Y IN
Sbjct: 66 SFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLIN 125
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLCK A ++ + ++ +PDV+ YNT++ LCK + +N L EM K I
Sbjct: 126 GLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICP 185
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
++ TY+ +I GL + +A GLL + + + + F I C+ G +++A +
Sbjct: 186 SVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVF 245
Query: 405 KQMADKDVSPGARVWEAL-----LLSSVSKLDFVNTSFIRLVDQILN 446
M +DV P + +L L++ V K + + I++VD+ +N
Sbjct: 246 AVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMN 292
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 16/287 (5%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
+ + ++ G+ D T + ++ +C + ++ + L F ++ GF V Y
Sbjct: 64 ALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIH--KALHFHDKVVAQGFKLNQVSYG 121
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I L K + AL L ++ ++PD+V Y +++G+ + A L+ E++
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
+ P V TYN I GLC ++ I ++ M P V T++ L+ A CK ++
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEA 241
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDG-----LASKGDII---------EACGLLEEALNKG 376
+ + M + + N+ TY+ ++DG + K I EA L EE K
Sbjct: 242 KNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQ 301
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +++ I GLC+ G AL+ + +M + P + +LL
Sbjct: 302 IYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLL 348
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 103/218 (47%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ ++ ++ SLVK + + QM+ +G+ ++V ++++N + +F
Sbjct: 12 IFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFA 71
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L G D T+ I GLC + + + + G K + ++Y TL+ LCKV
Sbjct: 72 NILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVG 131
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ E ++ + K + ++ Y+ +IDGL + +A L E + K +C ++
Sbjct: 132 QTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYN 191
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
ICGLC ++ A+ LL +M +D++P + L+
Sbjct: 192 TLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILI 229
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P I + +L ++ Y L ++ GL ++ T ++ IN + +
Sbjct: 10 PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
A + + G D IT+ TL++ LC E+++ ++ +G LN +Y +I+GL
Sbjct: 70 FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G A L K + M++ I GLC+ LV A L +M K + P
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189
Query: 419 WEALL 423
+ L+
Sbjct: 190 YNTLI 194
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R A+++L M D T S I+ S+C RD D + +EM+ G
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC--RDGCIDAAISLFKEMETKGIKSS 262
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +++R L K K D +L M S I P+++ + ++L+ + + +A EL+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G+ P++ TYN ++G C QN + M+ M PD++T+ +L++ C V+
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ ++ + + +G+V N TYSI++ G G I A L +E ++ G+ +
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC G + KALE+ + + + G ++ ++
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 17/280 (6%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
+ +N + I LN MIN FC KTC + +LG V KLG+
Sbjct: 113 QLELNGIAHNIYTLNIMIN-CFCRCCKTCF-------------AYSVLGKVM---KLGYE 155
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ +I+ L + KV +A+ ++++M +G +PD+V Y ++NG+ D A +L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++ + DV+TY+ I+ LC+ ++A I + ME G K V+TYN+L++ LCK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ N L+K+M + IV N+ T+++++D +G + EA L +E + +G+
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + G C + + +A +L M SP + +L+
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 118/240 (49%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D+ D+ + QEM + +VD++ ++ + ++ L Q++ +GI +I
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+++N A + +++ LG PD T+N I GL + V + ++ M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G +PDV+TYN+++ +C+ + + +L+++M+ + + ++ TYS +ID L G I
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A L +E KG+ + ++ + GLC+ G LLK M +++ P + LL
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 118/234 (50%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+L F ++++ G + +I + K A +L ++ G +PD + ++
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ ++ +A L D ++ G PDV TYN +NG+C+ + + ++ MEE K
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DV TY+T++ +LC+ ++ L KEM+ KGI ++ TY+ ++ GL G + LL
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ +++ + F+ + + G +++A EL K+M + +SP + L+
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 116/228 (50%), Gaps = 3/228 (1%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +T++I+ ++V D + + + G+ + V Y++++ G AEELF
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G++PDV TY + ++GLC +E +++ +++ ++ Y T+++ +CK
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L + KG+ N+ TY++MI GL KG + EA LL + G ++
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGA---RVWEALLLSSVSKL 430
I + G + + +L+++M S A ++ +LLS++ +L
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRL 595
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 119/262 (45%), Gaps = 22/262 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSV 136
P Y+ ++ ++ + +++LD + + N +P+ + F LIK Y R D +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVR--NKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 137 NLFYKIPKFRI--NRVGFAI---------------EILNCMINDGFCVDGKTCSLILSSV 179
+F I K + N V ++I E+ M++ G D T ++L +
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C+ L ++ L ++++K G+V YT +I + K KV DA + + G+KP
Sbjct: 449 CDNGKL--EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
+++ YT++++G+ + +A L ++ G P+ TYN I + ++ A K+I
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 300 ACMEELGSKPDVITYNTLLQAL 321
M+ G D + ++ L
Sbjct: 567 EEMKSCGFSADASSIKMVIDML 588
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 100/219 (45%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G V + +RS + K DA+ + +M P +V ++ + + + + +
Sbjct: 52 GNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+L + G+ ++YT N+ IN C+ ++ + +LG +PD T+NTL++ L
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+++ LV M G ++ TY+ +++G+ GD A LL + + + +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC+ G + A+ L K+M K + + +L+
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 161/398 (40%), Gaps = 41/398 (10%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
S LH +C P Y ++ + QF +++ + P +F L+
Sbjct: 292 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPS-LFNSLVHG 350
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
Y +A + + LF NR + C G+ ++ + S+C Q +L
Sbjct: 351 YCNAGDYAYAYKLF--------NR------MTTCGSPPGYVAY----NIFIGSICGQEEL 392
Query: 186 SSDELLGFVQ----EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+ ELL V+ EM V+ N R L K A IL +M G PD
Sbjct: 393 PNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDT 452
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
YT V+ + + K+ LF E+ G+ PDVYTY + I+ CK +E
Sbjct: 453 STYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDE 512
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M +G P+V+TY LL A K ++L + ++ M N TYS +IDGL G+
Sbjct: 513 MRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGE 572
Query: 362 IIEACGLLEEALNKGLCTQSSMFDET----------------ICGLCQRGLVRKALELLK 405
I +AC + E+ + +S + E I GLC+ V A ELL
Sbjct: 573 IQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLD 632
Query: 406 QMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
M P V++AL+ + K+D F+R+
Sbjct: 633 AMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMT 670
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 183/466 (39%), Gaps = 117/466 (25%)
Query: 60 QPHILSSLLH----------SFSIYN----CEPPPE--AYHFVIKTLAENSQFCDISSVL 103
P + +SL+H ++ ++N C PP AY+ I ++ + + + +L
Sbjct: 340 NPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPN-AELL 398
Query: 104 DHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMIND 163
D +EK ++ + T A+ R V F K A +IL M+
Sbjct: 399 DLVEKVYEEMLAASCVLNKVNT-ANFSRCLCGVGKFEK-----------AFQILKEMMRK 446
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG--------------FCFG---- 205
GF D T + +++ +C+ + + LL QEMK+ G FC
Sbjct: 447 GFVPDTSTYTKVITFLCQAKKVEKSFLL--FQEMKRAGVNPDVYTYTILIDSFCKAGLIE 504
Query: 206 -----------------MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+V YT ++ + +K +++ A I ++M P+ V Y+ ++
Sbjct: 505 QARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALI 564
Query: 249 NGVIVQEDYVKAEELFDELL----------------VLGLVPDVYTYNVYINGLCKQNNV 292
+G+ + KA E++++L+ + P+V TY I+GLCK V
Sbjct: 565 DGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKV 624
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL-------- 344
+++ M G +P+ I Y+ L+ CK+ +++ +E+ M G +
Sbjct: 625 SDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSL 684
Query: 345 ---------------------------NLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
N+ TY+ MIDGL+ G+I +A LL KG
Sbjct: 685 IDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGC 744
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GL + G +L+L KQM K +P + L+
Sbjct: 745 SPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLI 790
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I L K +KV DA +L+ M + G +P+ + Y +++G A+E+F
Sbjct: 608 VVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFL 667
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G +P V+TY I+ + K ++ +K+++ M P+V+TY ++ L KV
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVG 727
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+ + L+ M+ KG N+ TY+ +IDGL G + L ++ +KG +
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYR 787
Query: 386 ETICGLCQRGLVRKALELLKQM 407
I C GL+ +A LL +M
Sbjct: 788 VLINHCCAAGLLDEAHLLLDEM 809
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 15/248 (6%)
Query: 175 ILSSVCEQRDLSSDELL-GFVQ------------EMKKLGFCFGMVDYTNVIRSLVKKEK 221
+L++ CE + D L+ GF + M K G+ + YT++I + K +
Sbjct: 634 MLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGR 693
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ A+ +L++M +D P++V YT +++G+ + KA L + G P+V TY
Sbjct: 694 LDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTA 753
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+GL K +A +K+ M G P+ +TY L+ C L+ L+ EMK
Sbjct: 754 LIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTH 813
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+LQ Y + G + K I + GLLEE + + ++ I + G + AL
Sbjct: 814 WPKHLQGYHCAVQGFSKK--FIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETAL 871
Query: 402 ELLKQMAD 409
EL K++ +
Sbjct: 872 ELHKELVE 879
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M GFC+D T ++C+ + + ++K F V T +I L++
Sbjct: 230 MSASGFCMDRSTIGYFAQALCKVGRWADA-----LNMLEKEDFNLDTVLCTQMISGLMEA 284
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+A+ L++M+ + P++V Y +L+G + ++ + + + + ++ G P+ +
Sbjct: 285 SLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLF 344
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE------LNRLREL 333
N ++G C + K+ M GS P + YN + ++C E L+ + ++
Sbjct: 345 NSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKV 404
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+EM VLN + L G +A +L+E + KG +S + + I LCQ
Sbjct: 405 YEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQ 464
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLS 425
V K+ L ++M V+P + L+ S
Sbjct: 465 AKKVEKSFLLFQEMKRAGVNPDVYTYTILIDS 496
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 134/332 (40%), Gaps = 56/332 (16%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y +I L + + D +LD + E + ++ LI + + ++
Sbjct: 606 PNVVTYGALIDGLCKAQKVSDAHELLDAMLA-AGCEPNQIVYDALIDGFCKIGKIDNAQE 664
Query: 138 LFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+F ++ K F+ R+ A+++L+ M+ND + T + ++ +
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLS 724
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ ++ ++ L + M++ G +V YT +I L K K +L + QM S G P+
Sbjct: 725 KVGEI--EKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPN 782
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDEL------------------------LVLGL---- 272
V Y +++N +A L DE+ LGL
Sbjct: 783 YVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEM 842
Query: 273 -----VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT---YNTLLQALCKV 324
VP Y + I+ K +E +++ + E+ S ++ + Y +L+QALC
Sbjct: 843 ESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLA 902
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ L EM KGIV +L + ++ GL
Sbjct: 903 SQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGL 934
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 11/173 (6%)
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
NV + C+ + ++ + +++ G +P +TYN L+Q L ++ + KEM
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA---LNKGLCTQSSMFDETICGLCQRGL 396
G ++ T L G +A +LE+ L+ LCTQ I GL + L
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQ------MISGLMEASL 286
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+A+ L +M P + LL + K F R+++ ++ C
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCK--RIINMMMTEGC 337
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 3/221 (1%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+AL L ++K G +P V Y ++ + + E+ G D T +
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFA 246
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
LCK + M +E+ D + ++ L + N + M+ +
Sbjct: 247 QALCKVGRWADALNM---LEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCI 303
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ TY ++ G K ++ + +G S+F+ + G C G A +L
Sbjct: 304 PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL 363
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+M PG + + S + + N + LV+++
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKV 404
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 151/313 (48%), Gaps = 37/313 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R NRV A+ +++ M+ G+ D + I+ S+C+ + + ++ F +E+++ G
Sbjct: 167 RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV--NDAFDFFKEIERKGIRPN 224
Query: 206 MVDYTNVIRSL-----------------------------------VKKEKVFDALGILN 230
+V YT ++ L VK KV +A +
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M I PDIV Y+ ++NG+ + + +A ++FD ++ G + DV +YN ING CK
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
VE G+K+ M + G + +TYNTL+Q + ++++ +E +M + GI ++ TY+
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ GL G++ +A + E+ + + + I G+C+ G V +A L ++ K
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 411 DVSPGARVWEALL 423
+ P + ++
Sbjct: 465 GLKPDIVTYTTMM 477
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+ IL M+ G+ D T +++ C + +S + + V +M ++G+ +V
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVS--DAVSLVDKMVEIGYKPDIVA 192
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I SL K ++V DA +++ GI+P++V YT ++NG+ + A L +++
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ P+V TY+ ++ K V ++ M + PD++TY++L+ LC ++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ M KG + ++ +Y+ +I+G + + L E +GL + + ++ I
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G Q G V KA E QM +SP + LL
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 158/360 (43%), Gaps = 38/360 (10%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P AY+ +I +L + + D IE R+ + L+ ++ R+ D+
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 137 NLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGK----------------TCSLILSS 178
L + K +I N + ++ +L+ + +G ++ K T S +++
Sbjct: 246 RLLSDMIKKKITPNVITYS-ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C + DE M G +V Y +I K ++V D + + +M G+
Sbjct: 305 LCLHDRI--DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
+ V Y ++ G D KA+E F ++ G+ PD++TYN+ + GLC +E + +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M++ D++TY T+++ +CK ++ L + KG+ ++ TY+ M+ GL +
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 359 KGDIIEACGLL----EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
KG + E L +E L K CT S G + + EL+K+M +P
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSD------------GDITLSAELIKKMLSCGYAP 530
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 4/228 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ ++M+ LG + + VI +V AL IL +M G +PD V +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 161
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG + A L D+++ +G PD+ YN I+ LCK V +E G
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+V+TY L+ LC + L+ +M K I N+ TYS ++D G ++EA
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L EE + + + I GLC + +A QM D VS G
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA----NQMFDLMVSKG 325
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
K+ DA+ + + M P IV + +L+ ++ + Y L ++ VLG+ D+YT+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 281 VYI-----------------------------------NGLCKQNNVEAGIKMIACMEEL 305
+ I NG C++N V + ++ M E+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G KPD++ YN ++ +LCK + +N + KE++ KGI N+ TY+ +++GL + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL + + K + + + + G V +A EL ++M + P + +L+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 162/373 (43%), Gaps = 38/373 (10%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHI------------------EKRENFETPEFIFIDL 122
E + V+ TL +N +F S+L + RE TP +F L
Sbjct: 116 ETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPR-VFDSL 174
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGF 165
KT+A +F+++ + F ++ + RV A+ M
Sbjct: 175 FKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKI 234
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
+ T ++++S C L D+ + +Q+M++LGF V Y +I +K + A
Sbjct: 235 SPNTYTLNMVMSGYCRSGKL--DKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSA 292
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
L + N M +G++P++V + +++G +A ++F E+ L L P+ TYN ING
Sbjct: 293 LKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLING 352
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+Q + E + M G + D++TYNTL+ LCK + + + VKE+ + +V N
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
T+S +I G + + L + + G F+ I C+ A ++L+
Sbjct: 413 SSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLR 472
Query: 406 QMADKDVSPGARV 418
+M + + +R
Sbjct: 473 EMVRRSIPLDSRT 485
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 167/375 (44%), Gaps = 22/375 (5%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY + V++ L + D SVLD + +R P H ++
Sbjct: 112 PPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMY-----------HVILEAA 160
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
FR A+ +L + G +D C+L+L++VC+Q S DE L +++
Sbjct: 161 CSRGGGGGFR-----SAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGG-SVDEALRLLRD 214
Query: 197 M-KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+ G +V Y V++ L ++ ++ +M G P++V + ++ +
Sbjct: 215 LPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNG 274
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ + ++ +++ G PD+ Y ++G+CK+ ++E +++ M G KP+V+ YN
Sbjct: 275 LFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYN 334
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
T+L+ LC + EL+ EM L+ T++I++D G + LLE+ L
Sbjct: 335 TVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEH 394
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
G + I G C+ GL+ +A+ LLK MA P + +L S +V+
Sbjct: 395 GCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDA 454
Query: 436 SFIRLVDQILNTPCK 450
L+ Q++ C
Sbjct: 455 E--DLMSQMIEQGCS 467
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 178/375 (47%), Gaps = 18/375 (4%)
Query: 81 EAYHFVIKTLAENSQFCDI---SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
E H V+ + ++ DI ++VLD + K + E I +D + +Y + +V
Sbjct: 277 ERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEI-LDRMPSYG----LKPNVV 331
Query: 138 LFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+ + K R A E+L M ++ +D T ++++ C+ + ++ ++
Sbjct: 332 CYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY--RVIELLE 389
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M + G ++ YT VI K+ + +A+ +L M + G +P+ + YT+VL G+ E
Sbjct: 390 QMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAE 449
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+V AE+L +++ G P+ T+N IN LCK+ VE I+++ M G PD+I+Y+
Sbjct: 450 RWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYS 509
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
T++ L K + + EL+ M KG+ N YS + L+ +G I + + +
Sbjct: 510 TVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDV 569
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
+ + + +++ I LC+RG +A+E L M P + L+ S+
Sbjct: 570 TIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASE------ 623
Query: 436 SFIRLVDQILNTPCK 450
F++ ++L C
Sbjct: 624 GFVKEAQEMLTELCS 638
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 110/205 (53%), Gaps = 4/205 (1%)
Query: 173 SLILSSVCE-QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
+++L +C +R + +++L+ +M + G V + VI L KK V A+ +L Q
Sbjct: 439 TIVLKGLCSAERWVDAEDLM---SQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQ 495
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M +G PD++ Y+ V++G+ +A EL + ++ G+ P+ Y+ + L K+
Sbjct: 496 MLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGR 555
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ I+M ++++ + D + YN ++ +LCK +R E + M G + N TY+I
Sbjct: 556 INRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTI 615
Query: 352 MIDGLASKGDIIEACGLLEEALNKG 376
+I GLAS+G + EA +L E +KG
Sbjct: 616 LIRGLASEGFVKEAQEMLTELCSKG 640
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 105/275 (38%), Gaps = 56/275 (20%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S + C P +Y V+K L ++ D ++ + ++ P
Sbjct: 422 LLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPV---------- 471
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
F +N K V AIE+L M+ +G D
Sbjct: 472 ----TFNTVINFLCK-----KGLVEQAIELLKQMLLNGCSPD------------------ 504
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
++ Y+ VI L K K +AL +LN M + G+ P+ + Y+
Sbjct: 505 -------------------LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 545
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ + + + + ++FD + + + D YN I+ LCK+ + I+ +A M G
Sbjct: 546 IASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSG 605
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
P+ TY L++ L + +E++ E+ KG
Sbjct: 606 CMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 88/227 (38%), Gaps = 40/227 (17%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ------- 289
+ P+ Y V+ + + A + DE+ G P Y+V + C +
Sbjct: 111 VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFR 170
Query: 290 --------------------------------NNVEAGIKMIACM-EELGSKPDVITYNT 316
+V+ ++++ + G PDV++YN
Sbjct: 171 SAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNA 230
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+L+ LC + R+++L++EM G N+ T++ +I L G +L + ++ G
Sbjct: 231 VLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG 290
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
M+ + G+C+ G + A E+L +M + P + +L
Sbjct: 291 CTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVL 337
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 156/294 (53%), Gaps = 5/294 (1%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNV 212
+E++N M + V+G I++ +C+ S + ELL + E K+ FC + Y ++
Sbjct: 532 LEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR--FCVSCMSYNSI 589
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +K+ ++ A+ +M ++GI P+++ YT +++G+ +A E+ DE+ G+
Sbjct: 590 IDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGV 649
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D+ Y I+G CK++N+E+ + + + E G P YN+L+ + + +
Sbjct: 650 KLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALD 709
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K+M G+ +L TY+ +IDGL +G++I A L E GL M+ + GL
Sbjct: 710 LYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLS 769
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
++G K +++ ++M +V+P ++ A++ + + ++ +F RL D++L+
Sbjct: 770 KKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN-LDEAF-RLHDEMLD 821
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 140/286 (48%), Gaps = 3/286 (1%)
Query: 146 RINRVGFAIEILNCMINDG-FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
++ + A E+L MI + FCV + + I+ ++ ++ D + +EM G
Sbjct: 559 KVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEM--DYAVAAYEEMCANGISP 616
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ YT+++ L K ++ AL + ++MK+ G+K DI Y +++G + + A LF
Sbjct: 617 NVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALF 676
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
ELL GL P YN I+G N+ A + + M + G + D+ TY TL+ L K
Sbjct: 677 SELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKE 736
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L +L EM+ G+V + Y+++++GL+ KG ++ + EE + ++
Sbjct: 737 GNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 796
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
+ I G + G + +A L +M DK + P ++ L+ V K
Sbjct: 797 NAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKF 842
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 127/258 (49%), Gaps = 3/258 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI + M++DG ++ + +++ C+ DL S L +M+ G V ++ +
Sbjct: 322 AIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGS--ALDLFYKMENEGPSPNSVTFSVL 379
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K ++ AL +M+S G+ P + ++ G + + + +A +LFDE GL
Sbjct: 380 IERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 439
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+V+ N ++ LCKQ ++ +++ ME G P+V++YN ++ A C+ + ++ R
Sbjct: 440 A-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLART 498
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ M KG+ N TYSI+IDG D ++ + + + ++ I GLC
Sbjct: 499 VFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLC 558
Query: 393 QRGLVRKALELLKQMADK 410
+ G KA ELL M ++
Sbjct: 559 KVGQTSKARELLANMIEE 576
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 157/336 (46%), Gaps = 39/336 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N +G A+++ M N+G + T S+++ + ++ ++ L F ++M+ LG +
Sbjct: 352 NDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEM--EKALEFYKKMESLGLTPSVF 409
Query: 208 DYTNVIRSLVKKEK------VFD----------------------------ALGILNQMK 233
+I+ +K +K +FD A +L +M+
Sbjct: 410 HVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKME 469
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
S GI P++V Y V+ +++ A +F +L GL P+ YTY++ I+G K ++ +
Sbjct: 470 SRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQ 529
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM-KWKGIVLNLQTYSIM 352
++++ M + + + Y T++ LCKV + ++ REL+ M + K ++ +Y+ +
Sbjct: 530 NVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSI 589
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDG +G++ A EE G+ + + GLC+ + +ALE+ +M +K V
Sbjct: 590 IDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGV 649
Query: 413 SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILN 446
+ AL+ S ++ + F L+++ LN
Sbjct: 650 KLDIPAYGALIHGFCKKSNMESASALFSELLEEGLN 685
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 2/221 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A+E+ + M N G +D ++ C++ ++ S L E+ + G
Sbjct: 632 NRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASAL--FSELLEEGLNPSQP 689
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++I + AL + +M DG++ D+ YT +++G++ + + + A +L+ E+
Sbjct: 690 VYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEM 749
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+GLVPD Y V +NGL K+ +KM M++ P+V+ YN ++ + L
Sbjct: 750 QAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 809
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
+ L EM KGI+ + T+ I++ G K I A L
Sbjct: 810 DEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPIRAASL 850
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 6/302 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTN 211
A+E+ + I G D SL + + C+ +L+ L ++EMK+ C YT+
Sbjct: 251 ALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSL--LREMKEKKLCVPSQETYTS 308
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI + VK+ + DA+ ++M SDGI ++V T ++ G D A +LF ++ G
Sbjct: 309 VILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEG 368
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+ T++V I K +E ++ ME LG P V +T++Q K ++
Sbjct: 369 PSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEAL 428
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L E G+ N+ + ++ L +G I +A LL + ++G+ ++ +
Sbjct: 429 KLFDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAH 487
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCKM 451
C++ + A + M +K + P + L+ D N + +V+Q+ ++ ++
Sbjct: 488 CRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNV--LEVVNQMTSSNIEV 545
Query: 452 EG 453
G
Sbjct: 546 NG 547
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
V K GF + ++ + K + A+ I+NQM G+ P + L+ ++
Sbjct: 149 LVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALV 208
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ +A+EL+ ++ +G+ D T + + ++ +++ + E G++PD +
Sbjct: 209 QRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSL 268
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGI-VLNLQTYSIMIDGLASKGDIIEACGLLEE 371
Y+ +QA CK L L++EMK K + V + +TY+ +I +G++ +A +E
Sbjct: 269 LYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDE 328
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ G+ I G C+ + AL+L +M ++ SP + + L+
Sbjct: 329 MVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLI 380
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 122/218 (55%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++ +I SLVK+ K+ +A + N+M + GI+P+ + Y ++ G+ + +A ++ D
Sbjct: 335 VVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMD 394
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G PD++TYN+ ING CK V+ G+++ M G D +TY+TL+Q C+ R
Sbjct: 395 LMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSR 454
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L +++ +EM +G+ + TY+I++DGL G++ EA G+L++ + +++
Sbjct: 455 KLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYN 514
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G+C V A L + K V + + +L
Sbjct: 515 IIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIML 552
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 125/237 (52%), Gaps = 2/237 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++I+ ++C +D D+ L F EM+ G + Y ++I S + D +L
Sbjct: 267 TYTIIIDNLC--KDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLR 324
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M + I P++V ++ +++ ++ + +A++L++E++ G+ P+ TYN I GLC
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDK 384
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ +M+ M G PD+ TYN L+ CK ++++ L ++M +G++ + TYS
Sbjct: 385 RLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYS 444
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+I G +I A + +E +++G+ + + GLC G + +AL +L QM
Sbjct: 445 TLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 118/240 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +L ++M+ G + + +I ++ K+ A + ++ G +P+ V + +
Sbjct: 107 DLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTL 166
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG+ ++ +A EL D +++ VPD+ T N +NGLC ++ V + +IA M G
Sbjct: 167 LNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGC 226
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+ TY +L +CK +L+++M+ + I ++ TY+I+ID L G + +A
Sbjct: 227 QPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALS 286
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
E KG+ ++ I C G +LL+ M + ++P + AL+ S V
Sbjct: 287 FFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLV 346
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 139/288 (48%), Gaps = 8/288 (2%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G D T +++++ C +R L + ++ KLG+ V + ++ L + +VF
Sbjct: 120 GIAYDLYTLNIMINCFCRRRKLGF--AFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVF 177
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A+ +++ M PD++ ++NG+ +++ +A +L ++ G P+ +TY +
Sbjct: 178 EAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPIL 237
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N +CK N + + ++ ME KP V+TY ++ LCK L+ EM+ KGI
Sbjct: 238 NRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIK 297
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ TY+ +I S G + LL + + + + F I L + G + +A +L
Sbjct: 298 ANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDL 357
Query: 404 LKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPC 449
+M + + P + +L+ L + +LD N +++D +++ C
Sbjct: 358 YNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN----QMMDLMVSKGC 401
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 136/282 (48%), Gaps = 10/282 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLG---FVQEMKKLG 201
R ++GFA + + G+ + T + +L+ +C E R + EL+ Q + L
Sbjct: 137 RRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDL- 195
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+ ++ L K++V +A+ ++ +M ++G +P+ Y +LN + + A
Sbjct: 196 -----ITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+L ++ + P V TY + I+ LCK ++ + + ME G K +V TYN+L+ +
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C + +L+++M + I N+ T+S +ID L +G + EA L E + +G+ +
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNT 370
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GLC + +A +++ M K P + L+
Sbjct: 371 ITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILI 412
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 160/370 (43%), Gaps = 27/370 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y +I L ++ + D S +E + + F + LI ++ R+ D
Sbjct: 262 KPHVVTYTIIIDNLCKDGRLDDALSFFSEMETK-GIKANVFTYNSLIGSFCSFGRWDDGA 320
Query: 137 NLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
L + +I N V F+ I D +GK + E +DL
Sbjct: 321 QLLRDMITRKITPNVVTFSALI------DSLVKEGK--------LTEAKDL--------Y 358
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM G + Y ++I L +++ +A +++ M S G PDI Y +++NG
Sbjct: 359 NEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKA 418
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ LF ++ + G++ D TY+ I G C+ + K+ M G P ++TY
Sbjct: 419 KQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTY 478
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
LL LC EL ++ +M + L++ Y+I+I G+ + + +A L +
Sbjct: 479 AILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPS 538
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
KG+ ++ + GLC+R + +A L ++M + P + L+ + + D
Sbjct: 539 KGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDI-- 596
Query: 435 TSFIRLVDQI 444
T+ ++L++++
Sbjct: 597 TTSVQLIEEM 606
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 136/276 (49%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+RV A++++ M+ +G + T IL+ +C+ + +S L +++M+ +V
Sbjct: 209 DRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTAS--ALDLLRKMEHRKIKPHVV 266
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I +L K ++ DAL ++M++ GIK ++ Y ++ + +L ++
Sbjct: 267 TYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDM 326
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + P+V T++ I+ L K+ + + M G +P+ ITYN+L+ LC + L
Sbjct: 327 ITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRL 386
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ +++ M KG ++ TY+I+I+G + + L + +G+ + +
Sbjct: 387 DEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTL 446
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G CQ + A ++ ++M + V PG + LL
Sbjct: 447 IQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILL 482
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 115/234 (49%), Gaps = 2/234 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A ++++ M++ G D T +++++ C+ + + D+ + ++M G V
Sbjct: 385 RLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQV--DDGMRLFRKMSLRGMIADTVT 442
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I+ + K+ A + +M S G+ P I+ Y ++L+G+ + +A + D++
Sbjct: 443 YSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMH 502
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ D+ YN+ I+G+C N V+ + + G K D+ +YN +L LCK L+
Sbjct: 503 KCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLS 562
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
L ++MK G + TY+ +I DI + L+EE G + +S
Sbjct: 563 EADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAS 616
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 133/282 (47%), Gaps = 21/282 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y+ +I L + + + + ++D + + + + + LI + A + D +
Sbjct: 367 EPNTITYNSLIYGLCNDKRLDEANQMMDLMVSK-GCDPDIWTYNILINGFCKAKQVDDGM 425
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
LF K M G D T S ++ C+ R L + + QE
Sbjct: 426 RLFRK------------------MSLRGMIADTVTYSTLIQGFCQSRKLIVAKKV--FQE 465
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M G G++ Y ++ L ++ +ALGIL+QM ++ DI Y ++++G+
Sbjct: 466 MVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANK 525
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A LF L G+ D+ +YN+ ++GLCK++++ + M+E G +PD TYNT
Sbjct: 526 VDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNT 585
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
L++A + ++ +L++EMK G + T I++D L+S
Sbjct: 586 LIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSS 627
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
M Y +RS + K DA+ + M P ++ + + + + Y L
Sbjct: 55 MSSYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCK 114
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + G+ D+YT N+ IN C++ + + + +LG +P+ +T+NTLL LC
Sbjct: 115 QMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEG 174
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ELV M V +L T + +++GL K + EA L+ + G +
Sbjct: 175 RVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYG 234
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
+ +C+ G AL+LL++M + + P
Sbjct: 235 PILNRMCKSGNTASALDLLRKMEHRKIKP 263
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +IR L + +V +AL +L+ M G +P +V YT++L V + +A E+ DE+
Sbjct: 148 YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P++ TYNV ING+C++ V+ + + + G +PD ++Y T+L+ LC +
Sbjct: 208 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 267
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ EL EM K + N T+ +++ G + A +LE+ G +++ + I
Sbjct: 268 DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVI 327
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+C++G V A + L M SP + +L
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 362
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 143/320 (44%), Gaps = 42/320 (13%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RVG A+ +L+ M++ G T +++L +VC+ + + + EM+ G +V
Sbjct: 160 RVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG--QAMEVLDEMRAKGCTPNIVT 217
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I + ++ +V DA LN++ S G +PD V YT VL G+ + + EELF E++
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMM 277
Query: 269 VLGLVPDVYTY-----------------------------------NVYINGLCKQNNVE 293
+P+ T+ N+ IN +CKQ V+
Sbjct: 278 EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ + M G PD I+Y T+L+ LC+ +EL+KEM K N T++ I
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 397
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L KG I +A L+E+ G ++ + G C +G V ALEL M K
Sbjct: 398 CILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK--- 454
Query: 414 PGARVWEALL--LSSVSKLD 431
P + LL L + +LD
Sbjct: 455 PNTITYTTLLTGLCNAERLD 474
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 167/392 (42%), Gaps = 57/392 (14%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C+P Y +++ + +++ F VLD E R TP + ++I
Sbjct: 166 SLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD--EMRAKGCTPNIVTYNVI-- 221
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+N R RV A E LN + + GF D + + +L +C +
Sbjct: 222 ----------INGM-----CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266
Query: 186 SSDELLGFVQEMKK-------------LGFC-FGMVDYT--------------------N 211
E L F + M+K FC GMV+
Sbjct: 267 EDVEEL-FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI ++ K+ +V DA LN M S G PD + YT VL G+ E + A+EL E++
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+ T+N +I LC++ +E +I M E G + +++TYN L+ C ++
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL M K N TY+ ++ GL + + A LL E L K F+ +
Sbjct: 446 ELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
CQ+GL+ +A+EL++QM + +P + LL
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +IR+L ++ + DA +L + G D+ Y ++ G A L + V
Sbjct: 82 TKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV 141
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
PD YTY I GLC + V + ++ M G +P V+TY LL+A+CK +
Sbjct: 142 ---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 198
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
E++ EM+ KG N+ TY+++I+G+ +G + +A L + G + + +
Sbjct: 199 AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLK 258
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC EL +M +K+ P ++ L+
Sbjct: 259 GLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 31/332 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ Y C P +Y V+K L ++ D +L + R+N E F I
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM-VRKNCPPNEVTFNTFICIL 400
Query: 127 ADAHRFQDSVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDGK-------------- 170
+ + L ++ + +N V + N ++N GFCV G+
Sbjct: 401 CQKGLIEQATMLIEQMSEHGCEVNIVTY-----NALVN-GFCVQGRVDSALELFYSMPCK 454
Query: 171 ----TCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
T + +L+ +C L ++ ELL EM + +V + ++ +K + +A
Sbjct: 455 PNTITYTTLLTGLCNAERLDAAAELLA---EMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++ QM G P+++ Y +L+G+ + +A EL L+ G+ PD+ TY+ I
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
L +++ VE IKM +++LG +P + YN +L ALCK + + M G + N
Sbjct: 572 LSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
TY +I+GLA++ + E LL E ++G+
Sbjct: 632 ELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 161/368 (43%), Gaps = 27/368 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
+L S + C + VI T+ + + D L+++ +P+ I + ++K
Sbjct: 307 VLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC--SPDTISYTTVLKG 364
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
A R++D+ L ++ + NC N+ + C L + EQ +
Sbjct: 365 LCRAERWEDAKELLKEMVR------------KNCPPNE-VTFNTFICILCQKGLIEQATM 411
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+++M + G +V Y ++ + +V AL + M KP+ + YT
Sbjct: 412 -------LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYT 461
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+L G+ E A EL E+L P+V T+NV ++ C++ ++ I+++ M E
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P++ITYNTLL + K EL+ + G+ ++ TYS +I L+ + + EA
Sbjct: 522 GCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + G+ ++ ++++ + LC+R A++ M P + L+
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY-ITLIE 640
Query: 426 SVSKLDFV 433
++ DF+
Sbjct: 641 GLANEDFL 648
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L +I ++D +A L D G PDVY I LC++ +++ E G+
Sbjct: 50 LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
DV YNTL+ C+ +L+ R L+ M + + TY+ +I GL +G + EA
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 368 LLEEALNKGLCTQSSMFDETIC--GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL++ L++G Q S+ T+ +C+ +A+E+L +M K +P + ++
Sbjct: 167 LLDDMLHRG--CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + L ++++ +++ G PDV L++ LC+ + +++ +
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G +++ Y+ ++ G G + A L+ + + + + I GLC RG V +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIA---SMPVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
AL LL M + P + LL + F
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGF 196
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 4/281 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ L ++ GF VD T + +L +C + +SD + ++ M +LG
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKR-TSDAMDIVLRRMTELGCIPD 162
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y N+++ L + + +AL +L+ M D G PD+V Y VLNG + D KA
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ E+L G++PDV TY+ I LCK ++ ++++ M + G PD +TYN++L C
Sbjct: 223 TYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 282
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ +K+M+ G+ N+ TYS +++ L G EA + + +GL +
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G +G + + LL M + P V+ L+
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 165/385 (42%), Gaps = 62/385 (16%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y ++ L +N + + + D + KR E + L++ YA
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATK------- 354
Query: 137 NLFYKIPKFRINRVGFAIE---ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
G +E +L+ M+ +G D ++++ + +Q + D+ +
Sbjct: 355 --------------GALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV--DQAMLV 398
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+M++ G +V Y VI L K V DA+ QM +G+ P+I+ YT +++G+
Sbjct: 399 FSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCT 458
Query: 254 QEDYVKAEEL-----------------------------------FDELLVLGLVPDVYT 278
+ + KAEEL FD ++ +G+ PD+ T
Sbjct: 459 CDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 518
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I+G C ++ K++A M +G KPD++TY TL+ C+V ++ L KEM
Sbjct: 519 YNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMV 578
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G+ N+ TY+I++ GL A L G + S ++ + GLC+ L
Sbjct: 579 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD 638
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+AL + + + D+ R + ++
Sbjct: 639 EALRMFQNLCLTDLQLETRTFNIMI 663
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 133/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+LN M+ +G D T + IL C E +G +++M+ G +V Y+++
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSG--QPKEAIGTLKKMRSDGVEPNVVTYSSL 312
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A I + M G++PDI Y +L G + V+ L D ++ G+
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD + +N+ I KQ V+ + + + M + G P+V+ Y T++ LCK ++
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++M +G+ N+ Y+ +I GL + +A L+ E L++G+C + F+ I C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V ++ +L M V P + L+
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 131/282 (46%), Gaps = 23/282 (8%)
Query: 149 RVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
R+G +I+ N +I DG C+ GK DE + M +G +
Sbjct: 509 RIGVKPDIITYNTLI-DGCCLAGKM----------------DEATKLLASMVSVGVKPDI 551
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y +I + ++ DAL + +M S G+ P+I+ Y ++L G+ A+EL+
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA--CMEELGSKPDVITYNTLLQALCKV 324
+ G ++ TYN+ ++GLCK N + ++M C+ +L + + T+N ++ AL K
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL--QLETRTFNIMIGALLKC 669
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ ++L G+V +++TYS+M + L +G + E L G S M
Sbjct: 670 GRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRML 729
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
+ + L QRG + +A L + +K S A LL SS
Sbjct: 730 NSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLLESS 771
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 150/316 (47%), Gaps = 22/316 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFR----------INRV--GF--------AIEI 156
F + +L+K D +R Q+++ L + + R N V GF A
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYST 223
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
+ M++ G D T S I++++C+ + + D+ + + M K G + Y +++
Sbjct: 224 YHEMLDRGILPDVVTYSSIIAALCKAQAM--DKAMEVLNTMVKNGVMPDCMTYNSILHGY 281
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
+ +A+G L +M+SDG++P++V Y+ ++N + +A ++FD + GL PD+
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
TY + G + + ++ M G +PD +N L+ A K ++++ + +
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M+ G+ N+ Y +ID L G + +A E+ +++GL ++ I GLC
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 397 VRKALELLKQMADKDV 412
KA EL+ +M D+ +
Sbjct: 462 WDKAEELILEMLDRGI 477
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E++ M++ G C++ + I+ S C E R + S++L M ++G ++ Y
Sbjct: 465 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL---MVRIGVKPDIITYNT 521
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K+ +A +L M S G+KPDIV Y ++NG A LF E++ G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P++ TYN+ + GL A ++ + + G++ ++ TYN +L LCK +
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + + + L +T++IMI L G + EA L GL + L
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENL 701
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
++G + + +L M + S +R+ +++ + + D +++ ++D+
Sbjct: 702 IEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 39/191 (20%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE----- 326
+ P V+TY + I C+ ++ G + + + G + D IT+ LL+ LC +
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 327 ---LNRLREL-------------------------------VKEMKWKGIVLNLQTYSIM 352
L R+ EL + + + G ++ +Y+ +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
++G +GD +A E L++G+ + I LC+ + KA+E+L M V
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 413 SPGARVWEALL 423
P + ++L
Sbjct: 268 MPDCMTYNSIL 278
>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
Length = 567
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 153/306 (50%), Gaps = 4/306 (1%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F++++ + + L Y++ K N++ A +++ MI G D +C+ ++
Sbjct: 82 FLYLEYMIGKGHKPDGGQATQLMYELCK--SNKMRKATKVMELMIGSGTTPDPASCTFLV 139
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+++C++ ++ + V++M++ G+ V Y +++R L + +L IL++ G
Sbjct: 140 NNLCKRGNVGY--AMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKG 197
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P++ Y+ +L + +A L DE++ G P++ +YNV + GLCK+ E +
Sbjct: 198 LVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAM 257
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ + G P+V++YN LL++LC + +EL+ EM ++ T++I+I L
Sbjct: 258 QFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSL 317
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
A G +A +L++ ++ ++ I LC+ G V ++ L QM + +P
Sbjct: 318 ALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNE 377
Query: 417 RVWEAL 422
+ A+
Sbjct: 378 GTYNAI 383
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
++ DA L M G KPD T ++ + KA ++ + ++ G PD +
Sbjct: 77 RLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCT 136
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+N LCK+ NV ++++ MEE G + +TYN+L++ LC L++ +++ + K
Sbjct: 137 FLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKK 196
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G+V N+ TYS +++ + EA LL+E + KG ++ + GLC+ G +A
Sbjct: 197 GLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEA 256
Query: 401 LELLKQMADKDVSPGARVWEALLLS 425
++ + + K SP + LL S
Sbjct: 257 MQFFRDLPSKGFSPNVVSYNILLRS 281
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
RDL ++ +++ M G T ++ L K K+ A ++ M G PD
Sbjct: 74 RDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPA 133
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
T ++N + + + A +L +++ G + TYN + GLC N+ ++++
Sbjct: 134 SCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKF 193
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+ G P+V TY+ LL+A K R + L+ E+ KG NL +Y++++ GL +G
Sbjct: 194 MKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRT 253
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
EA + +KG ++ + LC G KA ELL +M + SP + L
Sbjct: 254 EEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNIL 313
Query: 423 LLS 425
+ S
Sbjct: 314 IGS 316
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 36/307 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
+++IL+ + G + T S +L + ++R +DE + + E+ G +V Y +
Sbjct: 186 SLQILDKFMKKGLVPNVFTYSFLLEAAYKER--GADEAIRLLDEIVAKGGKPNLVSYNVL 243
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K+ + +A+ + S G P++V Y ++L + + + KA+EL E+
Sbjct: 244 LTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGER 303
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P + T+N+ I L + ++++ M K +YN ++ LCK +++ + +
Sbjct: 304 SPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVK 363
Query: 333 LVKEMKWKGIVLNLQTYSIM----------------------------------IDGLAS 358
+ +M ++ N TY+ + I L
Sbjct: 364 CLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCR 423
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
KG+ A LL E G S + I GLC G++ +A+E+ M + P
Sbjct: 424 KGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDN 483
Query: 419 WEALLLS 425
+ AL+L
Sbjct: 484 FNALILG 490
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
N I L ++ KV +A I+ + + Y V++ + + + A +L E+
Sbjct: 381 NAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKY 440
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G VPD YTY+ I GLC + ++ +++ + MEE +PDV +N L+ LCK R+ +
Sbjct: 441 GFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLS 500
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+ + M KG + N TY+I+++G+A + ++ A +L+E
Sbjct: 501 LMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKE 541
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y VI SL +K + A +L +M G PD Y+ ++ G+ + +A E+F +
Sbjct: 414 YKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIME 473
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
PDV +N I GLCK + + + M + G P+ TY +++ + E+
Sbjct: 474 ENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEME 533
Query: 329 RLRELVKEMKWKGIV 343
++KE+ + V
Sbjct: 534 LAAAVLKELYLRQAV 548
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 23/190 (12%)
Query: 79 PPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNL 138
P E + I L E + + S++ + ++N T +F + +I + + L
Sbjct: 375 PNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDF-YKGVISSLCRKGNTYPAFQL 433
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
Y++ K+ GF D T S ++ +C + L DE + M+
Sbjct: 434 LYEMTKY------------------GFVPDSYTYSSLIRGLCSEGML--DEAMEIFSIME 473
Query: 199 KLGFCFGMVD-YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
+ +C VD + +I L K K +L + M G P+ YT+++ G+ QE+
Sbjct: 474 E-NYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEM 532
Query: 258 VKAEELFDEL 267
A + EL
Sbjct: 533 ELAAAVLKEL 542
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +IR L + +V +AL +L+ M G +P +V YT++L V + +A E+ DE+
Sbjct: 148 YTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P++ TYNV ING+C++ V+ + + + G +PD ++Y T+L+ LC +
Sbjct: 208 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 267
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ EL EM K + N T+ +++ G + A +LE+ G +++ + I
Sbjct: 268 DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVI 327
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+C++G V A + L M SP + +L
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVL 362
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 143/320 (44%), Gaps = 42/320 (13%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RVG A+ +L+ M++ G T +++L +VC+ + + + EM+ G +V
Sbjct: 160 RVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG--QAMEVLDEMRAKGCTPNIVT 217
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I + ++ +V DA LN++ S G +PD V YT VL G+ + + EELF E++
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMM 277
Query: 269 VLGLVPDVYTY-----------------------------------NVYINGLCKQNNVE 293
+P+ T+ N+ IN +CKQ V+
Sbjct: 278 EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ + M G PD I+Y T+L+ LC+ +EL+KEM K N T++ I
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 397
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L KG I +A L+E+ G ++ + G C +G V ALEL M K
Sbjct: 398 CILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK--- 454
Query: 414 PGARVWEALL--LSSVSKLD 431
P + LL L + +LD
Sbjct: 455 PNTITYTTLLTGLCNAERLD 474
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 167/392 (42%), Gaps = 57/392 (14%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C+P Y +++ + +++ F VLD E R TP + ++I
Sbjct: 166 SLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD--EMRAKGCTPNIVTYNVI-- 221
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+N R RV A E LN + + GF D + + +L +C +
Sbjct: 222 ----------INGM-----CREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266
Query: 186 SSDELLGFVQEMKK-------------LGFC-FGMVDYT--------------------N 211
E L F + M+K FC GMV+
Sbjct: 267 EDVEEL-FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI ++ K+ +V DA LN M S G PD + YT VL G+ E + A+EL E++
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+ T+N +I LC++ +E +I M E G + +++TYN L+ C ++
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL M K N TY+ ++ GL + + A LL E L K F+ +
Sbjct: 446 ELFYSMPCKP---NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
CQ+GL+ +A+EL++QM + +P + LL
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +IR+L ++ + DA +L + G D+ Y ++ G A L + V
Sbjct: 82 TKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPV 141
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
PD YTY I GLC + V + ++ M G +P V+TY LL+A+CK +
Sbjct: 142 ---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 198
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
E++ EM+ KG N+ TY+++I+G+ +G + +A L + G + + +
Sbjct: 199 AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLK 258
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC EL +M +K+ P ++ L+
Sbjct: 259 GLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 292
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 31/332 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ Y C P +Y V+K L ++ D +L + R+N E F I
Sbjct: 342 FLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM-VRKNCPPNEVTFNTFICIL 400
Query: 127 ADAHRFQDSVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDGK-------------- 170
+ + L ++ + +N V + N ++N GFCV G+
Sbjct: 401 CQKGLIEQATMLIEQMSEHGCEVNIVTY-----NALVN-GFCVQGRVDSALELFYSMPCK 454
Query: 171 ----TCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
T + +L+ +C L ++ ELL EM + +V + ++ +K + +A
Sbjct: 455 PNTITYTTLLTGLCNAERLDAAAELLA---EMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++ QM G P+++ Y +L+G+ + +A EL L+ G+ PD+ TY+ I
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
L +++ VE IKM +++LG +P + YN +L ALCK + + M G + N
Sbjct: 572 LSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPN 631
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
TY +I+GLA++ + E LL E ++G+
Sbjct: 632 ELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 160/368 (43%), Gaps = 27/368 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
+L S + C + VI T+ + + D L+++ +P+ I + ++K
Sbjct: 307 VLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC--SPDTISYTTVLKG 364
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
A R++D+ L ++ + NC N+ + C L + EQ +
Sbjct: 365 LCRAERWEDAKELLKEMVR------------KNCPPNE-VTFNTFICILCQKGLIEQATM 411
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+++M + G +V Y ++ + +V AL + M KP+ + YT
Sbjct: 412 -------LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYT 461
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+L G+ E A EL E+L P+V T+NV ++ C++ ++ I+++ M E
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P++ITYNTLL + EL+ + G+ ++ TYS +I L+ + + EA
Sbjct: 522 GCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + G+ ++ ++++ + LC+R A++ M P + L+
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY-ITLIE 640
Query: 426 SVSKLDFV 433
++ DF+
Sbjct: 641 GLANEDFL 648
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L +I ++D +A L D G PDVY I LC++ +++ E G+
Sbjct: 50 LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
DV YNTL+ C+ +L+ R L+ M + + TY+ +I GL +G + EA
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 368 LLEEALNKGLCTQSSMFDETIC--GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL++ L++G Q S+ T+ +C+ +A+E+L +M K +P + ++
Sbjct: 167 LLDDMLHRG--CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + L ++++ +++ G PDV L++ LC+ + +++ +
Sbjct: 47 NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G +++ Y+ ++ G G + A L+ + + + + I GLC RG V +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIA---SMPVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
AL LL M + P + LL + F
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGF 196
>gi|21553611|gb|AAM62704.1| unknown [Arabidopsis thaliana]
Length = 463
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 24/328 (7%)
Query: 122 LIKTYADAHRFQDSVNLFYKI----PKFRINRVGFAI-----------------EILNCM 160
++++YA D+V F I P FR R F I +LN M
Sbjct: 91 VLQSYASIAVVDDTVKFFQHIMKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLM 150
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
+N+G D T + + S+CE + DE ++E+ + Y +++ L K +
Sbjct: 151 VNNGLEPDQVTTDIAVRSLCETGRV--DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 221 KVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +++M+ D +KPD+V +T++++ V ++ +A L +L G PD + Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + G C + + + M+E G +PD ITYNTL+ L K + R +K M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G + TY+ +++G+ KG+ + A LLEE +G ++ + GLC+ L+ K
Sbjct: 329 AGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDK 388
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSV 427
+EL + M V + + L+ S V
Sbjct: 389 GMELYEMMKSSGVKLESNGYATLVRSLV 416
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ +VC ++L E + V ++ GF Y +++ K +A+G+ +M
Sbjct: 234 TILIDNVCNSKNLR--EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K +G++PD + Y ++ G+ +A ++ G PD TY +NG+C++
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ ME G P+ TYNTLL LCK R +++ EL + MK G+ L Y+ +
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL 411
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ L G + EA + + A++ + +S +
Sbjct: 412 VRSLVKSGKVAEAYEVFDYAVDSKSLSDASAY 443
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 131/251 (52%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ I+ ++C +++ ++ L EM G +V Y ++IR L + DA +L+ M
Sbjct: 259 TTIIDALCNYKNV--NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I P++V ++ +++ + + V+AE+L+DE++ + PD++TY+ ING C + +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ M M P+V+TYNTL++ CK + + EL +EM +G+V N TY+ +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I GL GD A + ++ ++ G+ + + GLC+ G + KAL + + + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 413 SPGARVWEALL 423
P + ++
Sbjct: 497 EPDIYTYNIMI 507
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 169/360 (46%), Gaps = 25/360 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+L+ C+P Y V+ L + S+L +EK + E I+ +I
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYTTIIDA 264
Query: 126 YADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+ D++NLF ++ R N V + ++ C+ N G D S +LS + E R
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYN-SLIRCLCNYGRWSDA---SRLLSDMIE-R 319
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
++ + +V ++ +I + VK+ K+ +A + ++M I PDI
Sbjct: 320 KINPN-----------------VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ ++NG + + +A+ +F+ ++ P+V TYN I G CK VE G+++ M
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ G + +TYNTL+Q L + + + +++ K+M G+ ++ TYSI++DGL G +
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A + E + ++ I G+C+ G V +L ++ K V P ++ ++
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ D T S +L+ C + +S E + V +M + +
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS--EAVALVDQMFVMEYQPN 184
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V + +I L K +A+ ++++M + G +PD+ Y V+NG+ + D A L
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV Y I+ LC NV + + M+ G +P+V+TYN+L++ LC
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I N+ T+S +ID +G ++EA L +E + + + +
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A + + M KD P + L+
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 32/351 (9%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y+ +I+ L ++ D S +L D IE++ N P + F LI + + +
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN---PNVVTFSALIDAFVKEGKLVE 343
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCS 173
+ L+ ++ K I+ F + +IN GFC+ + T +
Sbjct: 344 AEKLYDEMIKRSIDPDIFT---YSSLIN-GFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ C+ + + +E + +EM + G V Y +I+ L + A I +M
Sbjct: 400 TLIKGFCKAKRV--EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
SDG+ PDI+ Y+++L+G+ KA +F+ L + PD+YTYN+ I G+CK VE
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G + + G KP+VI Y T++ C+ L +EMK G + N TY+ +I
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
GD + L++E + G +S I L L + LE+L
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 127/258 (49%), Gaps = 2/258 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ + M+ L + + Y +I ++ ++ AL +L +M G +PDIV + +
Sbjct: 97 DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSL 156
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG + +A L D++ V+ P+ T+N I+GL N + +I M G
Sbjct: 157 LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC 216
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD+ TY T++ LCK +++ L+K+M+ I ++ Y+ +ID L + ++ +A
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L E NKG+ ++ I LC G A LL M ++ ++P + AL+ + V
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 428 SKLDFVNTSFIRLVDQIL 445
+ V +L D+++
Sbjct: 337 KEGKLVEAE--KLYDEMI 352
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 139/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N D + +++++ C + L L + +M KLG+
Sbjct: 92 KMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPL--ALAVLGKMMKLGYEPD 149
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++++ +++ +A+ +++QM +P+ V + +++G+ + +A L D
Sbjct: 150 IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALID 209
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G PD++TY +NGLCK+ +++ + ++ ME+ + DV+ Y T++ ALC +
Sbjct: 210 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N L EM KGI N+ TY+ +I L + G +A LL + + + + F
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G + +A +L +M + + P + +L+
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ E + + M G + Y V+ L K+ + AL +L +M+ I+ D+V YT
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ + ++ A LF E+ G+ P+V TYN I LC ++++ M E
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+V+T++ L+ A K +L +L EM + I ++ TYS +I+G + EA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E ++K ++ I G C+ V + +EL ++M+ + + + L+
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 102/210 (48%)
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R+++ K+ DA+ + +M P IV + +L+ + + L + + L +
Sbjct: 53 RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 112
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
D+Y+YN+ IN C+++ + + ++ M +LG +PD++T ++LL C + ++ L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V +M N T++ +I GL EA L++ + +G + + GLC+
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
RG + AL LLK+M + ++ ++
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 111/240 (46%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
DL D+ + EM + +V++ ++ ++ K K + + +M++ I D+
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y +++N + A + +++ LG PD+ T + +NG C + + ++ M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ +P+ +T+NTL+ L + + L+ M +G +L TY +++GL +GDI
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL++ + ++ I LC V AL L +M +K + P + +L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 131/249 (52%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I+ +C+ + + D+ L +EM+ G +V Y+++I L + DA +L+ M
Sbjct: 57 IIDGLCKYKHM--DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 114
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
I PD+ ++ +++ + + V+AE+L+DE++ + P + TY+ ING C + ++
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+M M PDV+TYNTL++ CK + + E+ +EM +G+V N TY+I+I
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL GD A + +E ++ G+ ++ + GLC+ G + KA+ + + + + P
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 294
Query: 415 GARVWEALL 423
+ ++
Sbjct: 295 TIYTYNIMI 303
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 30/327 (9%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P Y +I L ++ D S +L D IE++ N + F F LI + + ++
Sbjct: 84 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV--FTFSALIDAFVKEGKLVEAE 141
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCV---------------------DGKTCSLI 175
L+ ++ K I+ +I + +IN GFC+ D T + +
Sbjct: 142 KLYDEMVKRSIDP---SIVTYSSLIN-GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 197
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ C+ + + +E + +EM + G V Y +I+ L + A I +M SD
Sbjct: 198 IKGFCKYKRV--EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 255
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ P+I+ Y +L+G+ KA +F+ L + P +YTYN+ I G+CK VE G
Sbjct: 256 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 315
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ + G KPDV+ YNT++ C+ L KEMK G + N Y+ +I
Sbjct: 316 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 375
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSS 382
GD + L++E + G +S
Sbjct: 376 RLRDGDREASAELIKEMRSCGFAGDAS 402
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 173/403 (42%), Gaps = 60/403 (14%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+L+ C+P Y V+ L + ++L+ +E+ + E I+ +I
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDG 60
Query: 126 YADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
D++NLF ++ R N V ++ +++C+ N G D S +LS + E R
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYS-SLISCLCNYGRWSDA---SRLLSDMIE-R 115
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
++ D + ++ +I + VK+ K+ +A + ++M I P IV
Sbjct: 116 KINPD-----------------VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 158
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ ++NG + + +A+++F+ ++ PDV TYN I G CK VE G+++ M
Sbjct: 159 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 218
Query: 304 ELG-----------------------------------SKPDVITYNTLLQALCKVRELN 328
+ G P+++TYNTLL LCK +L
Sbjct: 219 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 278
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ + + ++ + + TY+IMI+G+ G + + L KG+ ++ I
Sbjct: 279 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 338
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
G C++G +A L K+M + P + + L+ + + D
Sbjct: 339 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 381
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 102/198 (51%)
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++++M + G +PD+V Y +V+NG+ + D A L +++ L P V YN I+G
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LCK +++ + + ME G +P+V+TY++L+ LC + L+ +M + I +
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ T+S +ID +G ++EA L +E + + + + I G C + +A ++ +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 406 QMADKDVSPGARVWEALL 423
M K P + L+
Sbjct: 181 FMVSKHCFPDVVTYNTLI 198
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 151/313 (48%), Gaps = 37/313 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R NRV A+ +++ M+ G+ D + I+ S+C+ + + ++ F +E+++ G
Sbjct: 167 RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV--NDAFDFFKEIERKGIRPN 224
Query: 206 MVDYTNVIRSL-----------------------------------VKKEKVFDALGILN 230
+V YT ++ L VK KV +A +
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M I PDIV Y+ ++NG+ + + +A ++FD ++ G + DV +YN ING CK
Sbjct: 285 EMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
VE G+K+ M + G + +TYNTL+Q + ++++ +E +M + GI ++ TY+
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ GL G++ +A + E+ + + + I G+C+ G V +A L ++ K
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 411 DVSPGARVWEALL 423
+ P + ++
Sbjct: 465 GLKPDIVTYTTMM 477
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+ IL M+ G+ D T +++ C + +S + + V +M ++G+ +V
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVS--DAVSLVDKMVEIGYKPDIVA 192
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I SL K ++V DA +++ GI+P++V YT ++NG+ + A L +++
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ P+V TY+ ++ K V ++ M + PD++TY++L+ LC ++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRID 312
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ M KG + ++ +Y+ +I+G + + L E +GL + + ++ I
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G Q G V KA E QM +SP + LL
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 158/360 (43%), Gaps = 38/360 (10%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P AY+ +I +L + + D IE R+ + L+ ++ R+ D+
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 137 NLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGK----------------TCSLILSS 178
L + K +I N + ++ +L+ + +G ++ K T S +++
Sbjct: 246 RLLSDMIKKKITPNVITYS-ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C + DE M G +V Y +I K ++V D + + +M G+
Sbjct: 305 LCLHDRI--DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
+ V Y ++ G D KA+E F ++ G+ PD++TYN+ + GLC +E + +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M++ D++TY T+++ +CK ++ L + KG+ ++ TY+ M+ GL +
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 359 KGDIIEACGLL----EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
KG + E L +E L K CT S G + + EL+K+M +P
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSD------------GDITLSAELIKKMLSCGYAP 530
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 4/228 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ ++M+ LG + + VI +V AL IL +M G +PD V +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 161
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG + A L D+++ +G PD+ YN I+ LCK V +E G
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+V+TY L+ LC + L+ +M K I N+ TYS ++D G ++EA
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L EE + + + + GLC + +A QM D VS G
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEA----NQMFDLMVSKG 325
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
K+ DA+ + + M P IV + +L+ ++ + Y L ++ VLG+ D+YT+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 281 VYI-----------------------------------NGLCKQNNVEAGIKMIACMEEL 305
+ I NG C++N V + ++ M E+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G KPD++ YN ++ +LCK + +N + KE++ KGI N+ TY+ +++GL + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL + + K + + + + G V +A EL ++M + P + +L+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 172/355 (48%), Gaps = 21/355 (5%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCD-----ISSVLDHIEKRENFET 114
P + +SL+ +F ++ + E H + K + N + C +++ +D + K + E
Sbjct: 495 NPVVYTSLIRNFFMHGRK---EDGHKIFKEM--NRRGCQPDLTLLNTYMDCVFKAGDVEK 549
Query: 115 PEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE---ILNCMINDGFCVDGKT 171
IF D IK Y F V Y I + + G A E I + M GF +D +
Sbjct: 550 GRAIFED-IKGYG----FLPDVR-SYSILIHGLTKAGQARETSSIFHAMKQQGFALDARA 603
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
+ ++ C+ L D+ ++EMK + Y ++I L K +++ +A + +
Sbjct: 604 YNAVVDGFCKSGKL--DKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEE 661
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
KS GI+ +++ Y+ +++G +A + +E++ GL P+VYT+N ++ L K
Sbjct: 662 AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEE 721
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ + M+E+ P+ TY+ L+ LC+V++ N+ +EM+ +G+V N+ TY+
Sbjct: 722 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 781
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
MI GLA G+I +AC L E G ++ F+ I G+ +A + ++
Sbjct: 782 MIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEE 836
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 158/365 (43%), Gaps = 24/365 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQ 133
+ EP Y+ +I L + + + D +E F P + ++ ++ A +F+
Sbjct: 386 DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLF--PNLLTVNIMVDRLCKAKKFE 443
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+ +F + N + C + DG G D+
Sbjct: 444 PAYEMFETASQRGCN----PNSVTYCSLIDGLGKKGNV----------------DDAYRL 483
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ M G V YT++IR+ + D I +M G +PD+ ++ V
Sbjct: 484 FENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFK 543
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D K +F+++ G +PDV +Y++ I+GL K + M++ G D
Sbjct: 544 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARA 603
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN ++ CK +L++ E+++EMK K + + TY +IDGLA + EA L EEA
Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 663
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
+KG+ ++ I G + G + +A +L++M K ++P W + L+ ++ K + +
Sbjct: 664 SKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS-LMDALVKAEEI 722
Query: 434 NTSFI 438
N + I
Sbjct: 723 NEALI 727
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G+ V C+ ++S++ R L E + + M++L F YT +I ++ + +
Sbjct: 142 GYGVPNPACADLVSALVRTRRLDDAERV--IAAMRRLKFRPAFSAYTVLIGAMAEARQPE 199
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
AL +L QM+ G + + +T ++ + + A L DE+ L PD+ YNV I
Sbjct: 200 RALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCI 259
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ K NV+ K ++ G KPD ++Y +++ LCK L+ EL +M+ + V
Sbjct: 260 DCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAV 319
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
Y+ MI G S G A LL++ +G F+ + L ++ V +AL L
Sbjct: 320 PCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTL 379
Query: 404 LKQMADKDVSPGARVWEALL 423
+ M KD P + + ++
Sbjct: 380 FEAM-KKDAEPNSSTYNIII 398
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
I +K G PD+ Y+++++G+ + +F + G D YN ++G
Sbjct: 552 AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGF 611
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK ++ +++ M+ P V TY +++ L K+ L+ L +E K KGI LN+
Sbjct: 612 CKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNV 671
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
YS +IDG G I EA +LEE + KGL ++ + L + + +AL +
Sbjct: 672 IVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQS 731
Query: 407 MADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
M + SP + ++L++ + ++ N +F+
Sbjct: 732 MKEMKCSPNTYTY-SILINGLCRVQKYNKAFV 762
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 154/377 (40%), Gaps = 26/377 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ + S C P Y +I L + D + +++ + P ++ LI+ +
Sbjct: 448 MFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP-VVYTSLIRNF 506
Query: 127 ADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDG 169
R +D +F ++ + F+ V I + GF D
Sbjct: 507 FMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDV 566
Query: 170 KTCSLI---LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
++ S++ L+ + R+ SS MK+ GF Y V+ K K+ A
Sbjct: 567 RSYSILIHGLTKAGQARETSS-----IFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAY 621
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+L +MK + P + Y +++G+ + +A LF+E G+ +V Y+ I+G
Sbjct: 622 EVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGF 681
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
K ++ ++ M + G P+V T+N+L+ AL K E+N + MK N
Sbjct: 682 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNT 741
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TYSI+I+GL +A +E +GL + I GL + G + A L ++
Sbjct: 742 YTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFER 801
Query: 407 MADKDVSPGARVWEALL 423
+P A + AL+
Sbjct: 802 FKANGGTPDAASFNALI 818
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++EM K G + + +++ +LVK E++ +AL MK P+ Y+++
Sbjct: 688 DEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSIL 747
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ + Y KA + E+ GLVP+V TY I GL K N+ + + G
Sbjct: 748 INGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGG 807
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD ++N L++ + + +E + KG +N ++AC
Sbjct: 808 TPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRIN-----------------VKACI 850
Query: 368 LLEEALNKGLCTQSS 382
L +ALNK C + +
Sbjct: 851 SLLDALNKAECLEQA 865
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 111/266 (41%), Gaps = 36/266 (13%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ ++K+ G +V + +++ L KK KV +AL + MK D +P+ Y ++++ +
Sbjct: 344 LLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLC 402
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ +A + DE+ GL P++ T N+ ++ LCK E +M + G P+ +
Sbjct: 403 MAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSV 462
Query: 313 TYNTLLQALCK---VRELNRLRE--------------------------------LVKEM 337
TY +L+ L K V + RL E + KEM
Sbjct: 463 TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEM 522
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+G +L + +D + GD+ + + E+ G + I GL + G
Sbjct: 523 NRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQA 582
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
R+ + M + + AR + A++
Sbjct: 583 RETSSIFHAMKQQGFALDARAYNAVV 608
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 108/246 (43%), Gaps = 2/246 (0%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++EM LG+ +++ +LV+ ++ DA ++ M+ +P YT+++ +
Sbjct: 135 LEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAE 194
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+A EL ++ +G V + + L ++ VE + ++ ++ +PD++
Sbjct: 195 ARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVL 254
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN + K ++ + E+K +G+ + +Y+ MI L G + EA L +
Sbjct: 255 YNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQME 314
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ + ++ I G G A +LL Q+ ++ P + ++L L K+D
Sbjct: 315 TERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVD 374
Query: 432 FVNTSF 437
T F
Sbjct: 375 EALTLF 380
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 160/344 (46%), Gaps = 21/344 (6%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
P A+ +I L NS+F L + R N + + L+ + D+V L+
Sbjct: 488 PGAFTTIIHWLCMNSRFESALRFLREMLLR-NMRPNDGLLTTLVGGLCKEGKHSDAVELW 546
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
++ ++ GF + T + ++ +C+ ++ E + +++M +
Sbjct: 547 FR------------------LLEKGFGANLVTTNALIHGLCKTGNM--QEAVRLLKKMLE 586
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
GF + Y +I K+ KV + + +M GI+PD Y ++++G+ +
Sbjct: 587 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 646
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A L++E LVP+VYTY V I+G CK + +E G K+ + + + + YNTL++
Sbjct: 647 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 706
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
A C+ +L +M+ KGI TYS +I G+ + G + +A L++E +GL
Sbjct: 707 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 766
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G C+ G + K + +L++M+ D+ P + ++
Sbjct: 767 NVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMI 810
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 26/362 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTY------ADAHRFQ- 133
Y +I L + +F + +SVL + +EK F E ++ LI Y DA R +
Sbjct: 385 TYSVLINGLMKLEKFNEANSVLKETLEK--GFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442
Query: 134 ---------DSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+SV L I F +I ++ A IL M++ GF ++ + I+ +C
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 502
Query: 184 DLSSDELLGFVQEM--KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
S L F++EM + + G++ T ++ L K+ K DA+ + ++ G ++
Sbjct: 503 RFESA--LRFLREMLLRNMRPNDGLL--TTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 558
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V +++G+ + +A L ++L G V D TYN I+G CK+ VE G K+
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M + G +PD TYN L+ +C++ +L+ L E K + +V N+ TY +MIDG
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 678
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
I E L E L + L S +++ I C+ G +A +L M K + P + +
Sbjct: 679 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 738
Query: 422 LL 423
L+
Sbjct: 739 LI 740
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 153/352 (43%), Gaps = 40/352 (11%)
Query: 112 FETPEFIFIDLIKTYADAHRFQDS------VNLFYKIPKFRINRVGF--AIEILNCMIND 163
F P+ I++ AD + +S V+L + + VGF AI + + N
Sbjct: 214 FGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANK 273
Query: 164 GFCVDGKTCSLILSSVCEQRDL--------------SSDELL-----------GFVQE-- 196
G KTC+ +LSS+ + +L S D L G V++
Sbjct: 274 GVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAI 333
Query: 197 -----MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
M+KLG +V Y N+I L K + +A +M DG+ ++ Y++++NG+
Sbjct: 334 QLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGL 393
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ E + +A + E L G P+ YN I+G CK N+ +++ M G P+
Sbjct: 394 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 453
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+T N+++Q CK+ ++ + +++EM +G +N ++ +I L A L E
Sbjct: 454 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 513
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + + + + GLC+ G A+EL ++ +K AL+
Sbjct: 514 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 565
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 160/387 (41%), Gaps = 48/387 (12%)
Query: 86 VIKTLAENSQFCDISS---VLDHIEKRENFETPEFIFIDLIKTYA-DAHRFQDSVNLFYK 141
V + LA F + + +L + K E ++F + + + D + F ++N F K
Sbjct: 266 VFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCK 325
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
K V AI++ M G + T + ++ +C+ +L DE F ++M K G
Sbjct: 326 GGK-----VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL--DEAFRFKEKMVKDG 378
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
++ Y+ +I L+K EK +A +L + G P+ V Y +++G + A
Sbjct: 379 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 438
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCK--------------------------------- 288
+ +++ G+ P+ T N I G CK
Sbjct: 439 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 498
Query: 289 --QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
+ E+ ++ + M +P+ TL+ LCK + + EL + KG NL
Sbjct: 499 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 558
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
T + +I GL G++ EA LL++ L +G ++ I G C+ G V + +L +
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618
Query: 407 MADKDVSPGARVWEALL--LSSVSKLD 431
M + + P + L+ + + KLD
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLD 645
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 2/229 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI ++ A+ + N + + T +++ C+ + E L E+
Sbjct: 640 RIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL--FTELLTQNLELN 697
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +IR+ + +A + + M+S GI P Y+ +++G+ A+ L D
Sbjct: 698 SVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLID 757
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL+P+V Y I G CK ++ + ++ M P+ ITY ++ K
Sbjct: 758 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSG 817
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
++ +L+ EM KGIV + TY+++ +G +G I E L E+ +
Sbjct: 818 DMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVG 866
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 171/349 (48%), Gaps = 23/349 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSV 136
P Y+ ++++L ++ + + VLD +RE + P+ I + LI+ + DS
Sbjct: 207 PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECY--PDVITYTILIEATCN-----DS- 258
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
VG A+++L+ M G D T +++++ +C++ L DE + F+
Sbjct: 259 ------------GVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL--DEAIKFLNN 304
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M G ++ + ++RS+ + DA +L M G P +V + +++N + +
Sbjct: 305 MPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRL 364
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A ++ +++ G +P+ +YN ++G C++ ++ I+ + M G PD++TYNT
Sbjct: 365 LGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNT 424
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL ALCK + + E++ ++ KG L TY+ +IDGL G A LLEE KG
Sbjct: 425 LLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKG 484
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L + + GL G V +A+++ M + P A + A++L
Sbjct: 485 LKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 533
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 139/280 (49%), Gaps = 5/280 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + A I+ + N G D T ++++ C+ S E+ +Q ++++
Sbjct: 154 RSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCK-----SGEIDKALQVLERMSVAPD 208
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++RSL K+ +A+ +L++ PD++ YT+++ +A +L D
Sbjct: 209 VVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLD 268
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PDV TYNV ING+CK+ ++ IK + M G +P+VIT+N +L+++C
Sbjct: 269 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTG 328
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L+ +M KG ++ T++I+I+ L K + A +LE+ G S ++
Sbjct: 329 RWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYN 388
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G CQ + +A+E L+ M + P + LL +
Sbjct: 389 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 428
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 140/291 (48%), Gaps = 21/291 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ +Y C+P ++ +++++ ++ D +L + ++ +P + +++ +
Sbjct: 301 FLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC--SPSVVTFNILINF 358
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R +G AI++L M G + + + +L C+++ +
Sbjct: 359 LCRKRL-----------------LGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKM- 400
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + +++ M G +V Y ++ +L K K A+ ILNQ+ S G P ++ Y
Sbjct: 401 -DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNT 459
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ A EL +E+ GL PD+ TY+ + GL + V+ IK+ ME L
Sbjct: 460 VIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLS 519
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
KP +TYN ++ LCK ++ +R + + M KG TY+I+I+G+A
Sbjct: 520 IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 5/237 (2%)
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+R LV+ ++ + L L +M G PD++ T ++ G KA + + L G
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPDV TYNV I G CK ++ K + +E + PDV+TYNT+L++LC +L E
Sbjct: 174 VPDVITYNVLIGGYCKSGEID---KALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAME 230
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ + ++ TY+I+I+ + + +A LL+E KG ++ I G+C
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGIC 290
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+ G + +A++ L M P +L S S +++ RL+ +L C
Sbjct: 291 KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAE--RLLADMLRKGC 345
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 150/360 (41%), Gaps = 40/360 (11%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQD 134
C P Y +I+ +S +LD E R+ P+ + + LI R +
Sbjct: 240 CYPDVITYTILIEATCNDSGVGQAMKLLD--EMRKKGCKPDVVTYNVLINGICKEGRLDE 297
Query: 135 SVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDG---------KTCS-------LIL 176
++ +P + + N + I IL M + G +D K CS +++
Sbjct: 298 AIKFLNNMPLYGCQPNVITHNI-ILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILI 356
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +C +R L + +++M K G + Y ++ +++K+ A+ L M S G
Sbjct: 357 NFLCRKRLLG--RAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 414
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
PDIV Y +L + A E+ ++L G P + TYN I+GL K E
Sbjct: 415 CYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAA 474
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M G KPD+ITY+TLL+ L +++ ++ +M+ I + TY+ ++ GL
Sbjct: 475 ELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 534
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL----------------CQRGLVRKA 400
A L + KG + + I G+ C RG V+K+
Sbjct: 535 CKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNELCSRGFVKKS 594
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 86/174 (49%), Gaps = 5/174 (2%)
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
+ N+++ L + +E G+K + M G PDVI +L++ C+ + + +++
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
++ G V ++ TY+++I G G+I +A +LE + ++ + LC G
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
+++A+E+L + ++ P + L+ ++ + D ++L+D++ CK
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCN--DSGVGQAMKLLDEMRKKGCK 276
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 157/348 (45%), Gaps = 19/348 (5%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSV 136
P + Y VI L++ + + + ++ N P+ F++ LIK + + +++
Sbjct: 110 PTLKTYTVVIDGLSKAGRVEEARRIF--VDMLGNGCRPDAFVYTALIKGLCKSGKPEEAY 167
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
L+ + + + + + DG C G+ + E R + DE +
Sbjct: 168 ALYKEANARKHHATAVPDVVTYTSLIDGLCKAGR--------ILEARQVFDDEAV----- 214
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ GF V YT++I L K +V + ++M++ G +PD V Y +++G + +
Sbjct: 215 --ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 272
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA ++ ++L G V TYN+ ++GLCK V MEE G V+TY+
Sbjct: 273 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 332
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ C ++ EL + M +G NL +Y+I+I GL G + +A E+ L +
Sbjct: 333 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 392
Query: 377 LCTQSSMFDETICGLCQR-GLVRKALELLKQMADKDVSPGARVWEALL 423
LC F+ + GLCQR V +EL + M + SP + L+
Sbjct: 393 LCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILM 440
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 7/256 (2%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+++++ +C ++ L DE ++ + G V Y I L K E+V DA +L +M
Sbjct: 11 TVVINGLCREKRL--DEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 68
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
P V YT +++G++ +A + ++++ G P + TY V I+GL K V
Sbjct: 69 DEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRV 128
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK----GIVLNLQT 348
E ++ M G +PD Y L++ LCK + L KE + V ++ T
Sbjct: 129 EEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVT 188
Query: 349 YSIMIDGLASKGDIIEACGLL-EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y+ +IDGL G I+EA + +EA+ +G + + I GLC+ G V + E +M
Sbjct: 189 YTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 248
Query: 408 ADKDVSPGARVWEALL 423
++ P A + AL+
Sbjct: 249 RNRGYEPDAVTYAALI 264
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 163/377 (43%), Gaps = 26/377 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET--PEFI-FIDLIKTYADAHR 131
C P Y +IK L ++ + + ++ R++ T P+ + + LI A R
Sbjct: 142 GCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGR 201
Query: 132 FQDSVNLFYK-------IPKF-----------RINRVGFAIEILNCMINDGFCVDGKTCS 173
++ +F IP ++ RV E + M N G+ D T +
Sbjct: 202 ILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 261
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ + + + + ++M + G V Y ++ L K +V +A M+
Sbjct: 262 ALIDGFMKAKMIPKAHRV--YRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAME 319
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G +V Y+ +++G + + A ELF +L G P++ +YN+ I GLC+ +
Sbjct: 320 ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLA 379
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALC-KVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + PDV T+N L LC ++ ++ EL + M +G NL +YSI+
Sbjct: 380 KAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSIL 439
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+DG+ G + A + E +++G+ +F+ I LC G V +ALE+ +++ +
Sbjct: 440 MDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA 499
Query: 413 SPGARVWEALLLSSVSK 429
W LL +S+
Sbjct: 500 PDAWSYWS--LLDGLSR 514
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 164/423 (38%), Gaps = 74/423 (17%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C P A+ VI L + + SVL+ R E + I A R D+
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLER-AVRAGCEPDYVTYNVFIDGLCKAERVDDA 61
Query: 136 VNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
L K+ + + R+ A+ +L M+ G KT ++++
Sbjct: 62 FQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDG 121
Query: 179 VCEQRDLSSDELLGFVQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGIL-- 229
+ + G V+E +++ G YT +I+ L K K +A +
Sbjct: 122 LSKA---------GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKE 172
Query: 230 -NQMKSDGIK-PDIVCYTMVLNGVIVQEDYVKAEELFD-ELLVLGLVPDVYTYNVYINGL 286
N K PD+V YT +++G+ ++A ++FD E + G +PD TY I+GL
Sbjct: 173 ANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGL 232
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITY-------------------------------- 314
CK VE G + M G +PD +TY
Sbjct: 233 CKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVST 292
Query: 315 ---NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
N +L LCK + M+ +G V + TYS ++DG S+G++ A L
Sbjct: 293 VTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRR 352
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
L++G ++ I GLC+ G + KA +++ + + P + A L +LD
Sbjct: 353 MLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLD 412
Query: 432 FVN 434
V+
Sbjct: 413 TVS 415
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 108/228 (47%), Gaps = 11/228 (4%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ RV A M G T S ++ C + ++S+ + + M G
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA--AVELFRRMLDRGCEPN 361
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELF 264
+V Y +IR L + K+ A ++ + PD+ + L+G+ + D V ELF
Sbjct: 362 LVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELF 421
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ ++ G P++++Y++ ++G+C+ +E +++ M G PDV+ +NTL++ LC
Sbjct: 422 ESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIA 481
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
++ E+ +E++ + + +Y ++DGL+ C +EEA
Sbjct: 482 GRVDEALEVFRELERRS-APDAWSYWSLLDGLSR-------CERMEEA 521
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 132/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ C++ L +E + EM G V Y +I +L K EKV DAL +
Sbjct: 51 TYTILIDRFCKEGRL--EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG 108
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M S G KPDI + ++ G+ + +A L+ ++L+ G++ + TYN I+ ++
Sbjct: 109 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 168
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ +K++ M G D ITYN L++ALC+ + + L ++M KG+ N + +
Sbjct: 169 AMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 228
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+I+GL G+I A L + +++GL ++ I GLC+ G ++AL L ++ +
Sbjct: 229 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 288
Query: 411 DVSPGARVWEALL 423
+ P A + L+
Sbjct: 289 GICPDAITYNTLI 301
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L KK + A ++N+M+ G +P+++ YT++++ + +A + DE+
Sbjct: 17 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 76
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL + YN I+ LCK V+ + M M G KPD+ T+N+L+ LCKV +
Sbjct: 77 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 136
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L ++M +G++ N TY+ +I +G + EA L+ + L +G ++ I
Sbjct: 137 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 196
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
LC+ G + K L L + M K ++P
Sbjct: 197 KALCRAGNIEKGLALFEDMMSKGLNP 222
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 143/321 (44%), Gaps = 23/321 (7%)
Query: 59 KQPHILSS--LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE 116
K+ +++S+ L++ I CEP Y +I + + + +VLD + +
Sbjct: 26 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK-GLALNA 84
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+ LI + QD++N+F M + G D T + ++
Sbjct: 85 VGYNCLISALCKDEKVQDALNMFGD------------------MSSKGCKPDIFTFNSLI 126
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+C+ +E LG Q+M G + Y +I + +++ + +AL ++N M G
Sbjct: 127 FGLCKVNKF--EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
D + Y ++ + + K LF++++ GL P+ + N+ INGLC+ N++ +
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ + M G PD++TYN+L+ LCK L +++ +GI + TY+ +I
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304
Query: 357 ASKGDIIEACGLLEEALNKGL 377
+G +A LL ++ G
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGF 325
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ + +L +G PD++TYN I GLCK+ + + +++ M+ G +P+VITY L+ C
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K L R ++ EM KG+ LN Y+ +I L + +A + + +KG
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
F+ I GLC+ +AL L + M + V + L+ + + + ++LV+
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA--LKLVN 178
Query: 443 QILNTPCKME 452
+L C ++
Sbjct: 179 DMLFRGCPLD 188
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G + +C+++++ +C ++ L F+++M G +V Y ++I L K
Sbjct: 215 MMSKGLNPNNISCNILINGLCRTGNIQ--HALEFLRDMIHRGLTPDIVTYNSLINGLCKT 272
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +AL + ++++ +GI PD + Y +++ + + A L + G +P+ T+
Sbjct: 273 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 332
Query: 280 NVYINGLCKQNNVE 293
+ ++ K+ + E
Sbjct: 333 YILVSNFIKEGDQE 346
>gi|18398498|ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146596|sp|Q84J71.1|PP161_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17670
gi|28393395|gb|AAO42121.1| unknown protein [Arabidopsis thaliana]
gi|28973597|gb|AAO64123.1| unknown protein [Arabidopsis thaliana]
gi|330251570|gb|AEC06664.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 463
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 24/328 (7%)
Query: 122 LIKTYADAHRFQDSVNLFYKI----PKFRINRVGFAI-----------------EILNCM 160
++++Y D+V LF I P FR R F I +LN M
Sbjct: 91 VLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLM 150
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
+N+G D T + + S+CE + DE ++E+ + Y +++ L K +
Sbjct: 151 VNNGLEPDQVTTDIAVRSLCETGRV--DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 221 KVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +++M+ D +KPD+V +T++++ V ++ +A L +L G PD + Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + G C + + + M+E G +PD ITYNTL+ L K + R +K M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G + TY+ +++G+ KG+ + A LLEE +G ++ + GLC+ L+ K
Sbjct: 329 AGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDK 388
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSV 427
+EL + M V + + L+ S V
Sbjct: 389 GMELYEMMKSSGVKLESNGYATLVRSLV 416
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ +VC ++L E + V ++ GF Y +++ K +A+G+ +M
Sbjct: 234 TILIDNVCNSKNLR--EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K +G++PD + Y ++ G+ +A ++ G PD TY +NG+C++
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ ME G P+ TYNTLL LCK R +++ EL + MK G+ L Y+ +
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL 411
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ L G + EA + + A++ + +S +
Sbjct: 412 VRSLVKSGKVAEAYEVFDYAVDSKSLSDASAY 443
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 113/218 (51%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I SL K + V DA + +QM + I PD+V ++ ++ G + +A LF
Sbjct: 208 VVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFR 267
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+++ + PD YT+N+ ++ LCK+ N++ M+ M + G P+V+TY++L+ C V
Sbjct: 268 EMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVN 327
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++N+ + ++ + G N +Y MI+G + EA L + KG+ ++
Sbjct: 328 QVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYN 387
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G + A EL+ +M D + L+
Sbjct: 388 SLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLI 425
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 136/256 (53%), Gaps = 2/256 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T ++++ ++C++ +L + + V M K G +V Y++++ +V A
Sbjct: 277 DYYTFNILVDALCKEGNLKGAKNMLVV--MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKH 334
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+LN + G P+ Y ++NG + +A LF+++ G+ PD TYN I+GLC
Sbjct: 335 VLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLC 394
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + +++ M + G ++ TYN L+ ALCK +++ LVK++K +GI ++
Sbjct: 395 KSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMY 454
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
T++I+I GL G + A + ++ L+KG + ++ + GLC+ GL +A LL +M
Sbjct: 455 TFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKM 514
Query: 408 ADKDVSPGARVWEALL 423
D + P A +E L+
Sbjct: 515 DDNGIIPDAVTYETLI 530
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 116/215 (53%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K + V +AL + N M+ GI PD V Y +++G+ A EL DE+
Sbjct: 351 YCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMH 410
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G +++TYN I+ LCK ++V+ I ++ +++ G +PD+ T+N L+ LCKV L
Sbjct: 411 DNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLK 470
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+++ +++ KG +N TY+IM++GL +G EA LL + + G+ + ++ I
Sbjct: 471 NAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLI 530
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + KA +LL++M +DV E +L
Sbjct: 531 QALFHKDENEKAEKLLREMIARDVVYALEGLEMVL 565
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+ FA ++ ++ G+ D T + ++ +C + E L F + LGF
Sbjct: 118 EMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVK--EALHFHDHVLALGFHLDQFS 175
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K + AL +L ++ +K ++V Y +++ + + + A EL+ +++
Sbjct: 176 YGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMI 235
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ PDV T++ I G C +E + M PD T+N L+ ALCK L
Sbjct: 236 AKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLK 295
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ ++ M +G++ N+ TYS ++DG + +A +L G + + I
Sbjct: 296 GAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMI 355
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ +V +AL L M K ++P + +L+
Sbjct: 356 NGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLI 390
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
+AH + +N F KI V A+ + N M G D T + ++ +C+ +S
Sbjct: 347 NAHSYCTMINGFCKIK-----MVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISY 401
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
L V EM G + Y +I +L K V A+ ++ ++K GI+PD+ + ++
Sbjct: 402 AWEL--VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNIL 459
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G+ A+++F +LL G + +TYN+ +NGLCK+ + +++ M++ G
Sbjct: 460 IYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGI 519
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
PD +TY TL+QAL E + +L++EM + +V L+
Sbjct: 520 IPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALE 559
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 206 MVDYTNVIRSLVKKEKVF--DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
++++ ++ SLVK A+ + +++ GI PDI + +++N + A +
Sbjct: 66 IIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSM 125
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++L +G PD T+N I GLC V+ + + LG D +Y TL+ LCK
Sbjct: 126 MAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCK 185
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ E ++++++ K + +N+ Y+ +ID L +I+A L + + K +
Sbjct: 186 IGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVT 245
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F I G C G + +A L ++M K+++P + L+
Sbjct: 246 FSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNN--VEAGIKMIACMEELGSKPDVITYNTLLQAL 321
F+ LL + +N + L K NN I + +E G PD+ T+N L+
Sbjct: 54 FNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCY 113
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C + E+N ++ ++ G + T++ +I GL G + EA + L G
Sbjct: 114 CHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQ 173
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ I GLC+ G R AL++L+++ K V ++ ++ S
Sbjct: 174 FSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDS 217
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 138/274 (50%), Gaps = 2/274 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+ A+ +L M D + I+ ++C +++ ++ L EM G +V Y
Sbjct: 220 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV--NDALNLFTEMDNKGIRPNVVTY 277
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++IR L + DA +L+ M I P++V ++ +++ + + V+AE+L+DE++
Sbjct: 278 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 337
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD++TY+ ING C + ++ M M P+V+TYNTL++ CK + +
Sbjct: 338 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 397
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL +EM +G+V N TY+ +I GL GD A + ++ ++ G+ + +
Sbjct: 398 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 457
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G + KAL + + + + P + ++
Sbjct: 458 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 491
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 167/360 (46%), Gaps = 25/360 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+L+ C+P Y V+ L + S+L +EK + E I+ +I
Sbjct: 190 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYTTIIDA 248
Query: 126 YADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+ D++NLF ++ R N V + ++ C+ N G D S +LS + E++
Sbjct: 249 LCNYKNVNDALNLFTEMDNKGIRPNVVTYN-SLIRCLCNYGRWSDA---SRLLSDMIERK 304
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+V ++ +I + VK+ K+ +A + ++M I PDI
Sbjct: 305 ------------------INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 346
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ ++NG + + +A+ +F+ ++ P+V TYN I G CK VE G+++ M
Sbjct: 347 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 406
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ G + +TYNTL+Q L + + + +++ K+M G+ ++ TYSI++DGL G +
Sbjct: 407 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 466
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A + E + ++ I G+C+ G V +L ++ K V P ++ ++
Sbjct: 467 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 526
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ D T S +L+ C + +S E + V +M + +
Sbjct: 111 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS--EAVALVDQMFVMEYQPN 168
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V + +I L K +A+ ++++M + G +PD+ Y V+NG+ + D A L
Sbjct: 169 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 228
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV Y I+ LC NV + + M+ G +P+V+TYN+L++ LC
Sbjct: 229 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 288
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I N+ T+S +ID +G ++EA L +E + + + +
Sbjct: 289 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 348
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A + + M KD P + L+
Sbjct: 349 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 386
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 32/351 (9%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y+ +I+ L ++ D S +L D IE++ N P + F LI + + +
Sbjct: 271 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN---PNVVTFSALIDAFVKEGKLVE 327
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCS 173
+ L+ ++ K I+ F + +IN GFC+ + T +
Sbjct: 328 AEKLYDEMIKRSIDPDIFT---YSSLIN-GFCMHDRLDEAKHMFELMISKDCFPNVVTYN 383
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ C+ + + +E + +EM + G V Y +I+ L + A I +M
Sbjct: 384 TLIKGFCKAKRV--EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
SDG+ PDI+ Y+++L+G+ KA +F+ L + PD+YTYN+ I G+CK VE
Sbjct: 442 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 501
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G + + G KP+VI Y T++ C+ L +EMK G + N TY+ +I
Sbjct: 502 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
GD + L++E + G +S I L L + LE+L
Sbjct: 562 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 612
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 127/258 (49%), Gaps = 2/258 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ + M+ L + + Y +I ++ ++ AL +L +M G +PDIV + +
Sbjct: 81 DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSL 140
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG + +A L D++ V+ P+ T+N I+GL N + +I M G
Sbjct: 141 LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC 200
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD+ TY T++ LCK +++ L+K+M+ I ++ Y+ +ID L + ++ +A
Sbjct: 201 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 260
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L E NKG+ ++ I LC G A LL M ++ ++P + AL+ + V
Sbjct: 261 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 320
Query: 428 SKLDFVNTSFIRLVDQIL 445
+ V +L D+++
Sbjct: 321 KEGKLVEAE--KLYDEMI 336
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 139/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N D + +++++ C + L L + +M KLG+
Sbjct: 76 KMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPL--ALAVLGKMMKLGYEPD 133
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++++ +++ +A+ +++QM +P+ V + +++G+ + +A L D
Sbjct: 134 IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALID 193
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G PD++TY +NGLCK+ +++ + ++ ME+ + DV+ Y T++ ALC +
Sbjct: 194 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 253
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N L EM KGI N+ TY+ +I L + G +A LL + + + + F
Sbjct: 254 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 313
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G + +A +L +M + + P + +L+
Sbjct: 314 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 351
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ E + + M G + Y V+ L K+ + AL +L +M+ I+ D+V YT
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 244
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ + ++ A LF E+ G+ P+V TYN I LC ++++ M E
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+V+T++ L+ A K +L +L EM + I ++ TYS +I+G + EA
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E ++K ++ I G C+ V + +EL ++M+ + + + L+
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 421
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 102/210 (48%)
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R+++ K+ DA+ + +M P IV + +L+ + + L + + L +
Sbjct: 37 RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 96
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
D+Y+YN+ IN C+++ + + ++ M +LG +PD++T ++LL C + ++ L
Sbjct: 97 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 156
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V +M N T++ +I GL EA L++ + +G + + GLC+
Sbjct: 157 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 216
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
RG + AL LLK+M + ++ ++
Sbjct: 217 RGDIDLALSLLKKMEKGKIEADVVIYTTII 246
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 111/240 (46%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
DL D+ + EM + +V++ ++ ++ K K + + +M++ I D+
Sbjct: 42 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 101
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y +++N + A + +++ LG PD+ T + +NG C + + ++ M
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ +P+ +T+NTL+ L + + L+ M +G +L TY +++GL +GDI
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 221
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL++ + ++ I LC V AL L +M +K + P + +L+
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ D T S +L+ C + +S E + V +M ++G+
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS--EAVALVDQMVEMGYKPD 185
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V + +I L K +A+ ++++M + G +PD+ Y V+NG+ + D A L
Sbjct: 186 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 245
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + +V YN I+GLCK +++ + ME G KPDV TYN+L+ LC
Sbjct: 246 KMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYG 305
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I N+ T++ +ID A +G +IEA L +E + + + ++
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 365
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A ++ M KD P + L+
Sbjct: 366 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 403
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 148/314 (47%), Gaps = 37/314 (11%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F N+ A+ +++ M+ G D T +++ +C++ D+ D L +++M+K
Sbjct: 197 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI--DLALSLLKKMEKGKIEA 254
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI----------------------- 241
+V Y +I L K + + DA + N+M++ GIKPD+
Sbjct: 255 NVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLL 314
Query: 242 ------------VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
V + +++ + ++AE+LFDE++ + P++ TYN ING C
Sbjct: 315 SDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 374
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ ++ ++ M PDV+TYNTL++ CK + + EL +EM +G+V N TY
Sbjct: 375 DRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 434
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ +I GL GD A + ++ ++ G+ + + GLC+ G + KAL + + +
Sbjct: 435 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 494
Query: 410 KDVSPGARVWEALL 423
+ P + ++
Sbjct: 495 SKMEPNIYTYNIMI 508
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 145/278 (52%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N G + T S++L+ C + L L + +M KLG+
Sbjct: 93 KMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPL--ALAVLGKMMKLGYEPD 150
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++++ +++ +A+ +++QM G KPD V + +++G+ + +A L D
Sbjct: 151 IVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALID 210
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G PD++TY +NGLCK+ +++ + ++ ME+ + +V+ YNT++ LCK +
Sbjct: 211 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYK 270
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L +M+ KGI ++ TY+ +I L + G +A LL + + + + F+
Sbjct: 271 HMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFN 330
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G + +A +L +M + + P + +L+
Sbjct: 331 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 368
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 166/359 (46%), Gaps = 23/359 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+L+ C+P Y V+ L + S+L +EK + E I+ +I
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEANVVIYNTIIDG 265
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAI-EILNCMINDGFCVDGKTCSLILSSVCEQRD 184
D+ +LF K+ I F +++C+ N G D S +LS + E R
Sbjct: 266 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDA---SRLLSDMIE-RK 321
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
++ + +V + ++I + K+ K+ +A + ++M I P+IV Y
Sbjct: 322 INPN-----------------VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 364
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++NG + + +A+++F ++ +PDV TYN I G CK VE G+++ M +
Sbjct: 365 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQ 424
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G + +TYNTL+Q L + + + +++ K+M G+ ++ TYSI++DGL G + +
Sbjct: 425 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 484
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A + E + ++ I G+C+ G V +L ++ K V P ++ ++
Sbjct: 485 ALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 543
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 158/357 (44%), Gaps = 24/357 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIK 124
L + +P Y+ +I L ++ D S +L D IE++ N P + F LI
Sbjct: 278 LFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN---PNVVTFNSLID 334
Query: 125 TYADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCV 167
+A + ++ LF ++ + I+ R+ A +I M++
Sbjct: 335 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 394
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + ++ C+ + + +E + +EM + G V Y +I+ L + A
Sbjct: 395 DVVTYNTLIKGFCKAKRV--EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 452
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
I +M SDG+ PDI+ Y+++L+G+ KA +F+ L + P++YTYN+ I G+C
Sbjct: 453 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMC 512
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K VE G + + G KP+VI Y T++ C+ L +EMK G + +
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSG 572
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
Y+ +I GD + L++E + G +S I L L + LE+L
Sbjct: 573 CYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 629
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 117/240 (48%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+L D+ + EM K +++++ ++ ++ K K + + QM++ GI +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+++LN + A + +++ LG PD+ T + +NG C + + ++ M
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E+G KPD +T+NTL+ L + + L+ M +G +L TY +++GL +GDI
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL++ + +++ I GLC+ + A +L +M K + P + +L+
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 105/210 (50%)
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R+ + + K+ DA+ + +M P I+ ++ +L+ + + L +++ LG+
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
+ YTY++ +N C+++ + + ++ M +LG +PD++T ++LL C + ++ L
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V +M G + T++ +I GL EA L++ + +G + + GLC+
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
RG + AL LLK+M + ++ ++
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTII 263
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 165/362 (45%), Gaps = 23/362 (6%)
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FID 121
++ LL + C P A + + L +++ D +++ + + P+ + +
Sbjct: 248 LVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGT--GPDVVTYTT 305
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
++ D RF ++V L+ + M+ G D C ++ +C+
Sbjct: 306 VVSCLCDHRRFSEAVGLWEE------------------MVRRGLKPDVVACGALIFGLCK 347
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+ + DE M L + Y +I + + A ++ M+ +G +PD+
Sbjct: 348 NQKV--DEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDV 405
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V Y ++LN KAE L ++ + G+ PD Y+YN+ + GLCK + ++ ++
Sbjct: 406 VTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSD 465
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
E+G D+++ N L+ A C+ +++N L KEM +KGI + TY I+I+GL G
Sbjct: 466 HMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGY 525
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
A L ++ LN + ++++ + LC+ G + A ++ QM K+VSP +
Sbjct: 526 SNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNT 585
Query: 422 LL 423
L+
Sbjct: 586 LI 587
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 4/211 (1%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQE-MKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
D + +++L +C+ L D+ FV + M+ GFC +V +I + + +KV AL
Sbjct: 439 DRYSYNILLKGLCKAHQL--DKAFAFVSDHMEVGGFC-DIVSCNILIDAFCRAKKVNSAL 495
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ +M GI+ D V Y +++NG+ AEELFD++L +VP+V YN+ ++ L
Sbjct: 496 NLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNL 555
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK + + K+ M + PD +T+NTL+ L K +L KEM+ KG+ +
Sbjct: 556 CKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDN 615
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
T+ +I GL +G A + E + G+
Sbjct: 616 LTFRYIISGLLDEGKATLAYEIWEYMMENGI 646
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F+ ++ G F Y ++ + K + ++M + G + V Y + +I
Sbjct: 147 FLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMI 206
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ E+ ++ L G +TY+ +I LC+ N +E +++ M++ G PD
Sbjct: 207 KNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFW 266
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
N + LC L ++V++M KG ++ TY+ ++ L EA GL EE
Sbjct: 267 ACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEM 326
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +GL I GLC+ V +A EL +M D+ ++ AL+
Sbjct: 327 VRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALI 377
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 149/378 (39%), Gaps = 36/378 (9%)
Query: 77 EPPPEAYH------FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAH 130
E P YH ++I L + F +S L + + + ++ L+ YA A
Sbjct: 116 ESRPGFYHNNFAIAYIISLLFVDDNFALLSEFLGRV-RSQGVAFHRSLYRVLLAGYARAG 174
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDG---FCVD-GKTCSLILSSVCEQRDLS 186
+F DSV IE + M+ G F VD + +++ + C
Sbjct: 175 KF-DSV-----------------IETFDEMVTSGCREFGVDYNRFIGVMIKNCC------ 210
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D + + GFC Y+ I +L + ++ +L M G PD +
Sbjct: 211 FDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNI 270
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ + A ++ +++ + G PDV TY ++ LC + + M G
Sbjct: 271 YVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRG 330
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KPDV+ L+ LCK ++++ EL M I LN+ Y+ +I G G I +A
Sbjct: 331 LKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAY 390
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
+ G ++ + C G+ KA L+++M V+P R +LL
Sbjct: 391 KTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPD-RYSYNILLKG 449
Query: 427 VSKLDFVNTSFIRLVDQI 444
+ K ++ +F + D +
Sbjct: 450 LCKAHQLDKAFAFVSDHM 467
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 8/275 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+R + A + ++ M +G D T +++L+ C +D+ +++M+ G
Sbjct: 381 WRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIG--MTDKAENLIRKMEMSGVNP 438
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
Y +++ L K ++ A ++ G DIV ++++ + A LF
Sbjct: 439 DRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLF 498
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ G+ D TY + INGL ++ M P+V YN +L LCKV
Sbjct: 499 KEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKV 558
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+++ +M K + + T++ +I L +EA L +E KG+ + F
Sbjct: 559 GHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTF 618
Query: 385 DETICGLCQRGLVRKALELLKQMA------DKDVS 413
I GL G A E+ + M D+DVS
Sbjct: 619 RYIISGLLDEGKATLAYEIWEYMMENGIILDRDVS 653
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 141/287 (49%), Gaps = 9/287 (3%)
Query: 131 RFQDSVNLFYKIPKFRINRVGF---AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
+ Q++V +++K +N+ + A +++ M+N G +D T ++++ C +D
Sbjct: 237 KHQEAVGIWFKT----LNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCC--KDSKM 290
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E + +M + GF + + ++ + K+ + +L+QMK++G++PDIV Y +
Sbjct: 291 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTI 350
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G +D KA+E EL+ GL P+V+ YN I G + ++ I + M+ G
Sbjct: 351 IDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGI 410
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P +TY +L+ +C + + + + + + L + Y+IMI G G ++EA
Sbjct: 411 QPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVA 470
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
EE ++G+ + + + G +A +L +M V P
Sbjct: 471 YFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIP 517
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 156/374 (41%), Gaps = 40/374 (10%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P + +I LA +F ++ VL +E+ E I+ +LI + ++
Sbjct: 79 PSVVTFGILINGLARGERFGEVGIVLQEMEQL-GVSPNEVIYNELIGWHCRKGHCSQALR 137
Query: 138 LFYK--IPKFRINRVGF---------------AIEILNCMINDGFCVDGKTCSLILSSVC 180
LF + + K + V + A IL M++ G V C L + V
Sbjct: 138 LFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVH---CGLFNTVVA 194
Query: 181 E--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI---------- 228
QR + ++ EM G T +R L K K +A+GI
Sbjct: 195 WLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKY 254
Query: 229 -------LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ M + GI+ D + Y +++ G +A +L ++ G PD++T+N
Sbjct: 255 MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNT 314
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
++ C +E ++ M+ G +PD+++Y T++ CK +++ + +E + E+ +G
Sbjct: 315 LLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRG 374
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ N+ Y+ +I G GDI A +E + G+ + + + +C GLV +A
Sbjct: 375 LKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAK 434
Query: 402 ELLKQMADKDVSPG 415
+ Q + +V G
Sbjct: 435 TIFSQARENNVDLG 448
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%)
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
Y+Y I LCK V+AG +M+A + G +P V+TYN L+ ALCK + L
Sbjct: 12 YSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGR 71
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M+ G+ ++ T+ I+I+GLA E +L+E G+ +++E I C++G
Sbjct: 72 MEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGH 131
Query: 397 VRKALELLKQMADKDVSPGA 416
+AL L +M K + P A
Sbjct: 132 CSQALRLFDEMVLKKMKPTA 151
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I++L K KV +L ++ G++P +V Y ++++ + +A L +
Sbjct: 13 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNV-EAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
G+ P V T+ + INGL + E GI ++ ME+LG P+ + YN L+ C+
Sbjct: 73 EQGGMTPSVVTFGILINGLARGERFGEVGI-VLQEMEQLGVSPNEVIYNELIGWHCRKGH 131
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ L EM K + TY+++ L +G++ A +LE+ L+ G+ +F+
Sbjct: 132 CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 191
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
+ L QR + LE + + ++ V+ G R + L+ + + +L
Sbjct: 192 VVAWLLQR---TRRLESVVSITNEMVTRGMRPNDPLMTACMREL 232
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D + E+ + G +V Y ++ +L K +V +A + +M+ G+ P +V + ++
Sbjct: 28 DAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGIL 87
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ E + + + E+ LG+ P+ YN I C++ + +++ M
Sbjct: 88 INGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKM 147
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA-C 366
KP +TYN + +ALCK E+ R ++++M G+ ++ ++ ++ L + +E+
Sbjct: 148 KPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVV 207
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+ E + +G+ + + LC+ G ++A+ + + +K
Sbjct: 208 SITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 251
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 165/362 (45%), Gaps = 23/362 (6%)
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FID 121
++ LL + C P A + + L +++ D +++ + + P+ + +
Sbjct: 248 LVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGT--GPDVVTYTT 305
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
++ D RF ++V L+ + M+ G D C ++ +C+
Sbjct: 306 VVSCLCDHRRFSEAVGLWEE------------------MVRRGLKPDVVACGALIFGLCK 347
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+ + DE M L + Y +I + + A ++ M+ +G +PD+
Sbjct: 348 NQKV--DEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPDV 405
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V Y ++LN KAE L ++ + G+ PD Y+YN+ + GLCK + ++ ++
Sbjct: 406 VTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSD 465
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
E+G D+++ N L+ A C+ +++N L KEM +KGI + TY I+I+GL G
Sbjct: 466 HMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGY 525
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
A L ++ LN + ++++ + LC+ G + A ++ QM K+VSP +
Sbjct: 526 SNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNT 585
Query: 422 LL 423
L+
Sbjct: 586 LI 587
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 4/211 (1%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQE-MKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
D + +++L +C+ L D+ FV + M+ GFC +V +I + + +KV AL
Sbjct: 439 DRYSYNILLKGLCKAHQL--DKAFAFVSDHMEVGGFC-DIVSCNILIDAFCRAKKVNSAL 495
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ +M GI+ D V Y +++NG+ AEELFD++L +VP+V YN+ ++ L
Sbjct: 496 NLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNL 555
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK + + K+ M + PD +T+NTL+ L K +L KEM+ KG+ +
Sbjct: 556 CKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDN 615
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
T+ +I GL +G A + E + G+
Sbjct: 616 LTFRYIISGLLDEGKATLAYEIWEYMMENGI 646
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
LL F+ ++ G F Y ++ + K + ++M + G + V Y +
Sbjct: 144 LLEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIG 203
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
+I + E+ ++ L G +TY+ +I LC+ N +E +++ M++ G P
Sbjct: 204 VMIKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFP 263
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
D N + LC L ++V++M KG ++ TY+ ++ L EA GL
Sbjct: 264 DFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLW 323
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EE + +GL I GLC+ V +A EL +M D+ ++ AL+
Sbjct: 324 EEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALI 377
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 1/244 (0%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
GFC Y+ I +L + ++ +L M G PD + ++ + A
Sbjct: 225 GFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYDA 284
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
++ +++ + G PDV TY ++ LC + + M G KPDV+ L+
Sbjct: 285 LQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFG 344
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK ++++ EL M I LN+ Y+ +I G G I +A + G
Sbjct: 345 LCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPD 404
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
++ + C G+ KA L+++M V+P R +LL + K ++ +F +
Sbjct: 405 VVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPD-RYSYNILLKGLCKAHQLDKAFAFV 463
Query: 441 VDQI 444
D +
Sbjct: 464 SDHM 467
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 8/275 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+R + A + ++ M +G D T +++L+ C +D+ +++M+ G
Sbjct: 381 WRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIG--MTDKAENLIRKMEMSGVNP 438
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
Y +++ L K ++ A ++ G DIV ++++ + A LF
Sbjct: 439 DRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLF 498
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ G+ D TY + INGL ++ M P+V YN +L LCKV
Sbjct: 499 KEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKV 558
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+++ +M K + + T++ +I L +EA L +E KG+ + F
Sbjct: 559 GHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTF 618
Query: 385 DETICGLCQRGLVRKALELLKQMA------DKDVS 413
I GL G A E+ + M D+DVS
Sbjct: 619 RYIISGLLDEGKATLAYEIWEYMMENGIILDRDVS 653
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 175/404 (43%), Gaps = 60/404 (14%)
Query: 77 EPPPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
PPP +HF ++ +L N + + S+ E N TP+ ++++
Sbjct: 58 RPPPPTFHFNYILSSLVNNKHYPTVISLFKKFE--SNGATPDLCTLNIL----------- 104
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+N F + + FA +L ++ G+ + T + ++ +C + ++ + L F
Sbjct: 105 -MNCF-----CHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIK--KALYFH 156
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++ GF V Y +I L K + +L +++ +KPD+V Y +++ +
Sbjct: 157 DQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKN 216
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLC--------------------------- 287
+ A +L+ E++V G+ P+V TYN + G C
Sbjct: 217 KLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTF 276
Query: 288 --------KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
K+ ++A ++A M + KPDV+TYN+L+ + ++ + + M
Sbjct: 277 NTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQ 336
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ N++TY+ MIDGL + + EA L EE K + + I GLC+ + +
Sbjct: 337 SGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLER 396
Query: 400 ALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
A+ L K+M ++ + P + LL L +L+ F RL+
Sbjct: 397 AIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLL 440
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 115/213 (53%)
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
+K ++ +A +L M IKPD+V Y +++G + + A+ +F + +G+ P+V
Sbjct: 517 ARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNV 576
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
Y + I+GLCK+ V+ + + M+ P+++TY +L+ ALCK L R L+KE
Sbjct: 577 QCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKE 636
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
MK GI ++ +Y+I++DGL G + A + + L KG ++ I LC+ GL
Sbjct: 637 MKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGL 696
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+AL+L +M DK P A ++ ++ + K
Sbjct: 697 FDEALDLQXKMEDKGCMPDAVTFDIIIWALFEK 729
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 177/411 (43%), Gaps = 69/411 (16%)
Query: 93 NSQFCDISSVLDHIEKRENFETPEFIFIDLIKT--YADAHRFQDSVNLFYKIPKFRINRV 150
N C ++++D + K + + + ++K D + ++ + F +N+V
Sbjct: 270 NPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY-----FFLNKV 324
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
A + M G + +T + ++ +C+++ + DE + +EMK +V YT
Sbjct: 325 KNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV--DEAMSLFEEMKYKNMIPDIVTYT 382
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++I L K + A+ + +MK GI+PD+ YT++L+ + A+E F LLV
Sbjct: 383 SLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVK 442
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G +V TYNV INGLCK + + + + ME G PD IT+ T++ AL + E ++
Sbjct: 443 GYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKA 502
Query: 331 RELVKEMKWKG-------------IVLNLQT----------------------------- 348
++++EM +G IVL + T
Sbjct: 503 EKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKY 562
Query: 349 --YSI--------------MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
YS+ MIDGL K + EA L EE +K + + I LC
Sbjct: 563 VFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALC 622
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
+ + +A+ LLK+M + + P + LL L +L+ F RL+
Sbjct: 623 KNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLL 673
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 134/280 (47%), Gaps = 2/280 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+G A ++ + MI G + T + ++ C L E + EMK + +
Sbjct: 219 LGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLK--EAFSLLNEMKLKNINPDVCTF 276
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I +L K+ K+ A +L M IKPD+V Y +++G A+ +F +
Sbjct: 277 NTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQ 336
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ P+V TY I+GLCK+ V+ + + M+ PD++TY +L+ LCK L R
Sbjct: 337 SGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLER 396
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L K+MK +GI ++ +Y+I++D L G + A + L KG ++ I
Sbjct: 397 AIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMIN 456
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
GLC+ L +A++L +M K P A ++ ++ + K
Sbjct: 457 GLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEK 496
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 98/180 (54%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ M G+ P++ CYT++++G+ ++ +A LF+E+ + P++ TY I+ LC
Sbjct: 563 VFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALC 622
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K +++E I ++ M+E G +PDV +Y LL LCK L +E+ + + KG LN+Q
Sbjct: 623 KNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQ 682
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y+ MI+ L G EA L + +KG + FD I L ++ KA ++L +M
Sbjct: 683 VYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEM 742
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 106/199 (53%), Gaps = 2/199 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F +N + A + M G + + ++++ +C+++ + DE + +EMK
Sbjct: 552 FLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK--TVDEAMSLFEEMKHKNMFP 609
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V YT++I +L K + A+ +L +MK GI+PD+ YT++L+G+ A+E+F
Sbjct: 610 NIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIF 669
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
LLV G +V Y IN LCK + + + ME+ G PD +T++ ++ AL +
Sbjct: 670 QRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEK 729
Query: 325 RELNRLRELVKEMKWKGIV 343
E ++ +++ EM +G++
Sbjct: 730 DENDKAEKILXEMIARGLM 748
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 93/181 (51%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M ++G + YT +I L KK+ V +A+ + +MK + P+IV YT +++ +
Sbjct: 567 MAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHH 626
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A L E+ G+ PDVY+Y + ++GLCK +E ++ + G +V Y
Sbjct: 627 LERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTA 686
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK + +L +M+ KG + + T+ I+I L K + +A +L E + +G
Sbjct: 687 MINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746
Query: 377 L 377
L
Sbjct: 747 L 747
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI +L M G D + +++L +C+ L + + Q + G+ + YT +
Sbjct: 630 AIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEI--FQRLLVKGYHLNVQVYTAM 687
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K +AL + +M+ G PD V + +++ + +++ KAE++ E++ GL
Sbjct: 688 INELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
Query: 273 VPD 275
+ +
Sbjct: 748 MKE 750
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 153/312 (49%), Gaps = 8/312 (2%)
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
F K+ F++ GF EIL C G+ ++++ C++ ++ + E+
Sbjct: 111 FMKLKYFKL-VWGFYKEILEC----GYPASLYFFNILMHRFCKEGEMRLAQ--SVFDEIT 163
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
K G +V + ++ ++ + + + + M + G++PD+ Y++++NG+ +
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMN 223
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
A ELF E++ GLVP+ T+ I+G CK +++ ++ M G PD+ITYNTL+
Sbjct: 224 DANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLI 283
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCK +L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + +
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIR 343
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF-VNTSF 437
+ I GLC+ G A ++L++M + P + ++ K D +
Sbjct: 344 LDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKL 403
Query: 438 IRLVDQILNTPC 449
++ + + + PC
Sbjct: 404 LKEMQRDGHVPC 415
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 2/168 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ + A+E M+ GF D T + ++ +C++ DL + L + EM G
Sbjct: 253 KTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDL--IDEMSMKGLKPD 310
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ YT +I K+ + AL +M + I+ D V YT +++G+ + V AE++
Sbjct: 311 KITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLR 370
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
E+L +GL PD TY + IN CK+ +V+ G K++ M+ G P V+T
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 128/264 (48%), Gaps = 6/264 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + + K G + Y
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQSV--FDAITKWGLRPXVXSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + ELFDE+L
Sbjct: 182 TLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD ITYNTL LCK +LN+
Sbjct: 242 GLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 302 HGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSP 414
LCQ G A ++L++M + P
Sbjct: 362 LCQEGRSXDAEKMLREMLSVGLKP 385
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 102/212 (48%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K G ++ G + + ++++ D A+ +FD + G
Sbjct: 113 VLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + ++ G ++ + M G +PDV TY+ L+ L K ++
Sbjct: 173 LRPXVXSYNTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXN 232
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N T++ +IDG G + A + ++ L++ L ++ GL
Sbjct: 233 ELFDEMLXKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGL 292
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G + +A L+ +M+ K + P + L+
Sbjct: 293 CKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLI 324
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 107/231 (46%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M G D T S++++ + ++ + D+ EM G
Sbjct: 189 RLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXM--DDXNELFDEMLXKGLVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD + Y + G+ + D +A L D
Sbjct: 247 SVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +TY I+G CK+ +++A + M + D + Y L+ LC+
Sbjct: 307 EMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ + L+E G
Sbjct: 367 RSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNG 417
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y + L KK + A G++++M G+KPD YT +++G + D A E
Sbjct: 282 FITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRK 341
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + D Y I+GLC++ KM+ M +G KPD TY ++ CK
Sbjct: 342 RMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKG 401
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ + + +KEM+ G V + TY+++++G
Sbjct: 402 DVWKGXKXLKEMQRNGHVPXVVTYNVLMNG 431
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 154/330 (46%), Gaps = 27/330 (8%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV-------- 150
+E + + ++F LI Y ++ +D++ + +++P +V
Sbjct: 56 LETKGTQRSDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLK 115
Query: 151 ------GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
GF E L C G+ ++++ C++ ++ + + K G
Sbjct: 116 YFKLVWGFYEESLEC----GYPASLYFFNILMHXFCKEGEIRLAQ--SVFDSITKWGLRP 169
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V + ++ +K + + + + M++ G+ PD+ Y++++NG+ + A ELF
Sbjct: 170 SVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELF 229
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 230 DEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKK 289
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L + +L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 290 GDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAY 349
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + P
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +++G A E++ ++L
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L+PD+ TYN I GLCK+ +++ +I M G KPD ITY TL+ CK +L
Sbjct: 269 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I + Y+ +I GL +G ++A +L E L+ GL + + I
Sbjct: 329 TAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
C++G V +LLK+M P
Sbjct: 389 NEXCKKGDVWTGSKLLKEMQRXGYVP 414
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ + M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--SVMQASGVHPDVYTYSVLINGLCKESKM--DDANELFDEMLBNGLVPNXVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXG 411
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+B+G + T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRV--DLAMEIYRQMLSQSLLPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G V N+ T
Sbjct: 403 LLKEMQRXGYVPNVVT 418
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +K + + + N M++ G++PD+ Y++++NG+ + A ELFD
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKG 290
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + P
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 148/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + +
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G P+ +T+ TL+ CK ++ E+ K M + + +L TY+ +I GL
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 112/227 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ +L L PD+ TYN I GLCK+ +++ +I M G
Sbjct: 248 IDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I M S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ TYS++I+GL + + +A L +E L+ GL
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ K M + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++G +G T + ++ C+ + D + + M ++ Y +
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKLMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G + ++ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 2/252 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + GF +V + ++I +L K V +A +L QM +G+ P+ V YT +++G
Sbjct: 140 HEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTL 199
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A ++F E+ GL+PD+ ++N +++ LCK + ++ M G +P+++TY
Sbjct: 200 GRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTY 259
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
LL + MK GIV N ++I+ID A +G + EA +L E
Sbjct: 260 GILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQG 319
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
+GL + I LC+ G + A++ QM V P V+ +L+ + D V
Sbjct: 320 QGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVK 379
Query: 435 TSFIRLVDQILN 446
LV +++N
Sbjct: 380 AK--ELVYEMMN 389
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 167/383 (43%), Gaps = 58/383 (15%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + C P +Y V+K L ++++ +L + K E +P+ + + +
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTV--- 122
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
H F F+ ++G A + + M+ GF D T + I++++C+ R +
Sbjct: 123 --IHGF------------FKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVD 168
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ ELL +++M G V YT++I + +A + +M G+ PDIV +
Sbjct: 169 NAELL--LRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNS 226
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING--------------------- 285
++ + +A E+F + G P++ TY + ++G
Sbjct: 227 FMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDG 286
Query: 286 --------------LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
K+ ++ + +++ M+ G PDV TY+TL+ ALC++ L
Sbjct: 287 IVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAV 346
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFDETICG 390
+ +M G+ N Y +I G + GD+++A L+ E +N G+ + + F+ +
Sbjct: 347 DKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHS 406
Query: 391 LCQRGLVRKA---LELLKQMADK 410
+C+ G V A +L+K + ++
Sbjct: 407 ICKEGRVMDAHHIFDLVKDIGER 429
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ K ++ D L + +M IKP V Y ++L+G+ V A+++ E++
Sbjct: 470 YNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMI 529
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G + TYN+ + GLC+ N + I M + + K ++ T NT++ ++ V+
Sbjct: 530 GCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRRE 589
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++L + G+V N TY IMI L +G + EA + G S + ++TI
Sbjct: 590 EAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTI 649
Query: 389 CGLCQRGLVRKALELLKQMADKDV 412
L ++G + KA + ++ K +
Sbjct: 650 RTLLEKGEIVKAGNYMSKVDGKSI 673
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 38/188 (20%)
Query: 274 PDVYTYNVYINGLCKQNNVEAG----------------------IKMIAC---------- 301
P ++TY V +NG C+ E G +K + C
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 302 ----MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM-KWKGIVL-NLQTYSIMIDG 355
M ELG PD +Y +L+ LC + +L++ M K +G+ ++ TY+ +I G
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+G I +AC L E + +G + I LC+ V A LL+QM D V P
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185
Query: 416 ARVWEALL 423
+ +++
Sbjct: 186 KVTYTSMI 193
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 20/253 (7%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F + L+ Y + R D +NLF ++ +I I I DG G+T
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNI----ILDGLFRAGRT----- 518
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
V Q+ L EM G + Y +++ L + +A+ + ++ +
Sbjct: 519 --VAAQKML---------HEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMN 567
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+K +I ++N + + +A++LF + GLVP+ TY + I L K+ +VE
Sbjct: 568 VKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEAD 627
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
M + ME+ G P N ++ L + E+ + + ++ K I L T S+++
Sbjct: 628 NMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSISLEASTSSLLLSLF 687
Query: 357 ASKGDIIEACGLL 369
+ KG+ E LL
Sbjct: 688 SGKGNYREQIQLL 700
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R A+++L M D T S I+ S+C RD D + +EM+ G
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC--RDGCIDAAISLFKEMETKGIKSS 262
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +++R L K K D +L M S I P+++ + ++L+ + + +A EL+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G+ P++ TYN ++G C QN + M+ M PD++T+ +L++ C V+
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ ++ + + +G+V N TYSI++ G G I A L +E ++ G+ +
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC G + KALE+ + + + G ++ ++
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 17/280 (6%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
+ +N + I LN MIN FC KTC + +LG V KLG+
Sbjct: 113 QLELNGIAHNIYTLNIMIN-CFCRCCKTCF-------------AYSVLGKVM---KLGYE 155
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ +I+ L + KV +A+ ++++M +G +PD+V Y ++NG+ D A +L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++ + DV+TY+ I+ LC+ ++A I + ME G K V+TYN+L++ LCK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ N L+K+M + IV N+ T+++++D +G + EA L +E + +G+
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + G C + + +A +L M SP + +L+
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 118/240 (49%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D+ D+ + QEM + +VD++ ++ + ++ L Q++ +GI +I
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+++N A + +++ LG PD T+N I GL + V + ++ M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G +PDV+TYN+++ +C+ + + +L+++M+ + + ++ TYS +ID L G I
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A L +E KG+ + ++ + GLC+ G LLK M +++ P + LL
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 118/234 (50%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+L F ++++ G + +I + K A +L ++ G +PD + ++
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ ++ +A L D ++ G PDV TYN +NG+C+ + + ++ MEE K
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DV TY+T++ +LC+ ++ L KEM+ KGI ++ TY+ ++ GL G + LL
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ +++ + F+ + + G +++A EL K+M + +SP + L+
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +T++I+ ++V D + + + G+ + V Y++++ G AEELF
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G++PDV TY + ++GLC +E +++ +++ ++ Y T+++ +CK
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L + KG+ N+ TY++MI GL KG + EA LL + G ++
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGA 416
I + G + + +L+++M S A
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADA 578
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 2/235 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A +L+ M+ + D T + ++ C + + D+ + + + K G V
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV--DDGMKVFRNISKRGLVANAV 404
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +++ + K+ A + +M S G+ PD++ Y ++L+G+ KA E+F++L
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + Y I G+CK VE + + G KP+V+TY ++ LCK L
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ L+++M+ G N TY+ +I GD+ + L+EE + G +S
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 100/219 (45%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G V + +RS + K DA+ + +M P +V ++ + + + + +
Sbjct: 52 GNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+L + G+ ++YT N+ IN C+ ++ + +LG +PD T+NTL++ L
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+++ LV M G ++ TY+ +++G+ GD A LL + + + +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC+ G + A+ L K+M K + + +L+
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 2/276 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M N G DG T ++++++ C+ + + L + M+ + YT +
Sbjct: 424 AFSVFEDMSNAGIKPDGITYNILMNAFCKNGQM--NRALELLARMESGDCPPTLRTYTII 481
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +K + A + MK G +P Y ++++G+ +A + DE++V G+
Sbjct: 482 IDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGV 541
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +Y I G ++ K ++E+G KPDVI Y +LL+A CK +
Sbjct: 542 HPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLA 601
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM G+ +N Y+I++DG A +GD+ EA ++++ ++GL + I C
Sbjct: 602 ITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACC 661
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
+ G + KA E ++QM + V P + + L+ S
Sbjct: 662 KAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWAS 697
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G +V Y +I K K+ AL I N+M+ GIK + Y+M+++G + D A
Sbjct: 365 GLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANA 424
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+F+++ G+ PD TYN+ +N CK + ++++A ME P + TY ++
Sbjct: 425 FSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDG 484
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
K+ +L E V++MK G + TY++++ GLA G + A +++E + G+
Sbjct: 485 FMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPN 544
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G G + A + ++ + + P + +LL
Sbjct: 545 ERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLL 587
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 38/267 (14%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ M+ G + YTN+I + + + A+ + +M+++G+ P+ Y+++++G
Sbjct: 216 ESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRL 275
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME----------- 303
D AE F L + YN I+ CK N+E ++ ME
Sbjct: 276 GDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLY 335
Query: 304 ---------------------------ELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
E G P V++Y L+ K+ ++++ ++ E
Sbjct: 336 NMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNE 395
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M+ +GI N +TYS++IDG GD A + E+ N G+ ++ + C+ G
Sbjct: 396 MEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQ 455
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
+ +ALELL +M D P R + ++
Sbjct: 456 MNRALELLARMESGDCPPTLRTYTIII 482
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 160/389 (41%), Gaps = 34/389 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
S+ S +P Y+ ++ +N Q ++ L+ + + E+ + P ++T
Sbjct: 426 SVFEDMSNAGIKPDGITYNILMNAFCKNGQ---MNRALELLARMESGDCPP-----TLRT 477
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
Y ++ F KI R+ A E + M GF T ++I+ + + +
Sbjct: 478 YTII------IDGFMKIGDLRM-----AFETVRDMKMAGFRPSAATYNVIMHGLAQAGQM 526
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D + EM G YT +I + A N++K G+KPD++ Y
Sbjct: 527 --DRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYA 584
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+L + E+ G+ + Y YN+ ++G ++ ++ ++ M
Sbjct: 585 SLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHE 644
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G PD+ +Y + + A CK ++ + E +++MK +G+ NLQ Y+ +I G AS +A
Sbjct: 645 GLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKA 704
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK------ALELLKQMADKDVS---PGA 416
+E + G+ ++ + L R V + L + +M D+ + A
Sbjct: 705 LICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQGICVDFATA 764
Query: 417 RVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ W+ L+ K + + R V++I
Sbjct: 765 KHWQRFLI----KAERQSGDLTRAVERIF 789
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 21/257 (8%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
D+T ++ K+ A M++ GI+P++ YT +++ V +D A +E+
Sbjct: 194 DHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEM 253
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA-CMEELGSKPDVITYNTLLQALCKVRE 326
G+ P+ TY+V I+G + +VEA + + E DVI YN ++ A CK
Sbjct: 254 EAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVI-YNNIIHAYCKAGN 312
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN----------KG 376
+ R ++ M+ +G+ L Y++++DG C +++ LN G
Sbjct: 313 MERAEAIMTAMEEQGLEATLGLYNMLMDGYVH-------CRAVDKCLNVFRRLKARTETG 365
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
L + I + G + KAL++ +M D+ + + + ++ V D N
Sbjct: 366 LSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANA- 424
Query: 437 FIRLVDQILNTPCKMEG 453
+ + + N K +G
Sbjct: 425 -FSVFEDMSNAGIKPDG 440
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 9/173 (5%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P + + +N K+ + + M G +P+V +Y L+ A ++L
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V+EM+ +G+ N TYS++I G GD+ A + AL++ +++ I C+
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCK 309
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
G + +A ++ M ++ + ++ L+ V R VD+ LN
Sbjct: 310 AGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYV---------HCRAVDKCLN 353
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 195/435 (44%), Gaps = 38/435 (8%)
Query: 30 HQTLDQQQAKQNVKQSLT-TPPTKQQQQ----------IPKQPHI---LSSLLHSFSIY- 74
H L +K + +S T TPP K Q I +Q ++ L H+ +
Sbjct: 70 HHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHR 129
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
N E Y +I+ L++ F + +++ + K + + E +FI +I+ Y A R +
Sbjct: 130 NFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQ-IKCGENLFITVIRNYGFAGRPKL 188
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
++ F +IP F + ++ N ++N V K L+ L F
Sbjct: 189 AIRTFLRIPSFGLQP---SVRSFNTLLNT--LVQNKRFDLVH--------------LMFK 229
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
KK G + ++++L KK + A+ +L +M + G P++V YT +L G + +
Sbjct: 230 NCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSK 289
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
D V A +F E+L G VPD TY + ++G CK+ +K++ MEE +P+ +TY
Sbjct: 290 GDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTY 349
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+++A CK ++ + L+ +M K + + +ID L +G + AC L ++ L
Sbjct: 350 GVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLK 409
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
K +++ I LC+ G V +A +L + +K P + AL+ +
Sbjct: 410 KNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPE 468
Query: 435 TSFIRLVDQILNTPC 449
+ RL D ++ C
Sbjct: 469 AA--RLWDNMVEKGC 481
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
L+ Y RF D+V + ++ + R+ ND T +I+ + C+
Sbjct: 317 LMDGYCKKGRFMDAVKVMDEMEENRVEP------------ND------VTYGVIIEAYCK 358
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
++ S E+L + +M + + VI L ++ KV A + ++ PD
Sbjct: 359 EK--KSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDN 416
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
+ +++ + + +A +LFDE G +P TYN I G+C+ + ++
Sbjct: 417 AITSTLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPEAARLWDN 475
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
M E G P+ TYN L++ CKV +++EM G + N TY+I
Sbjct: 476 MVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 27/350 (7%)
Query: 122 LIKTYADAHRFQDSVNL---------------FYKIPKF-----RINRVGFAIEILNCMI 161
LIK Y D HR D++ L +Y + F ++ V +E N +
Sbjct: 308 LIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLME--NMVQ 365
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
N D T + ++ ++ + +D+ L F++E ++ GF V Y+ V+ S K +
Sbjct: 366 NSNLIPDQVTYNTLIYALSKHG--HADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKN 423
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ A ++ M S G PD+V YT +++G +A+++ ++ G P+ TY V
Sbjct: 424 IDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTV 483
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
+NGLC +MI EE P+ ITY+ ++ L + +L+ +L +EM KG
Sbjct: 484 LLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKG 543
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ N +++I L +++ A LEE L+KG F I G CQ G + AL
Sbjct: 544 FLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAAL 603
Query: 402 ELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILN-TP 448
+L+ M + P A + L L S+LD + ++++ + ++ TP
Sbjct: 604 SMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTP 653
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ IL M G D C+ + + + L ++ L F++ MK G +V Y +
Sbjct: 251 ALRILTLMQKAGVEPDLSICNTAIYVLVKGNKL--EKALRFLERMKVAGIEPDIVSYNCL 308
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV-LG 271
I+ ++ DAL ++ +M G PD V Y V+ + + + L + ++
Sbjct: 309 IKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSN 368
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L+PD TYN I L K + + + + EE G D + Y+ ++ + CK + +++ +
Sbjct: 369 LIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAK 428
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
LV +M KG ++ TY+ +IDG G I EA +L++ G + + + GL
Sbjct: 429 SLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGL 488
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G +A E++ + +P A + A++
Sbjct: 489 CHNGKSLEAREMINVSEEHWWTPNAITYSAVM 520
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 123/247 (49%), Gaps = 11/247 (4%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI-VCYTMVLNGVIVQEDYV-KAEELFDE 266
++ V+ S + + +AL IL M+ G++PD+ +C T + V+V+ + + KA +
Sbjct: 235 FSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIY--VLVKGNKLEKALRFLER 292
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ V G+ PD+ +YN I G C + ++ +++IA M G PD ++Y T++ LCK R+
Sbjct: 293 MKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRK 352
Query: 327 LNRLRELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++ L++ M + ++ + TY+ +I L+ G +A L EA KG +
Sbjct: 353 VEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYS 412
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ C+ + KA L+ M K +P + A++ V K+D +++ Q
Sbjct: 413 AVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAK----KMLQQ 468
Query: 444 ILNTPCK 450
+ CK
Sbjct: 469 MYKHGCK 475
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 156/359 (43%), Gaps = 21/359 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ C P +Y+ V+ L ++ + ++ +++++ + N + + LI
Sbjct: 324 LIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYAL 383
Query: 127 ADAHRFQDSVNLFYKIPK---FRINRVGF---------------AIEILNCMINDGFCVD 168
+ H D +F + + F I++VG+ A ++ M + G D
Sbjct: 384 S-KHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPD 442
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + I+ C + DE +Q+M K G V YT ++ L K +A +
Sbjct: 443 VVTYTAIIDGFCRVGKI--DEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREM 500
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+N + P+ + Y+ V++G+ + +A +L E++ G +P+ N+ I LC+
Sbjct: 501 INVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCR 560
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
NV K + G +V+ + +++ C++ +L+ ++++M + T
Sbjct: 561 NQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAIT 620
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y+ + D L K + EA L+ + L KG+ + I CQ G V ++LL++M
Sbjct: 621 YTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKM 679
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 144/310 (46%), Gaps = 11/310 (3%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILN 158
S+V+D K +N + + + ID+ + D V I F R+ ++ A ++L
Sbjct: 412 SAVVDSFCKNKNIDKAKSLVIDMYSKGCNP----DVVTYTAIIDGFCRVGKIDEAKKMLQ 467
Query: 159 CMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
M G + T +++L+ +C + L + E++ +E + + Y+ V+ L
Sbjct: 468 QMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEH---WWTPNAITYSAVMHGLR 524
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
++ K+ +A + +M G P+ V +++ + ++ V A++ +E L G +V
Sbjct: 525 REGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVV 584
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
+ I G C+ +++A + M+ M PD ITY TL AL K L+ EL+ +M
Sbjct: 585 NFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKM 644
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
KGI TY +I G + + LLE+ + + +++++ I LC G
Sbjct: 645 LGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ--PFKTVYNQVIEKLCYFGNR 702
Query: 398 RKALELLKQM 407
+A +LL ++
Sbjct: 703 EEAEKLLGKV 712
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 148/347 (42%), Gaps = 25/347 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+L + C+P Y ++ L N + + +++ E E++ TP I TY
Sbjct: 465 MLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSE--EHWWTPNAI------TY 516
Query: 127 -ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
A H + R ++ A ++ MI GF + +L++ S+C +++
Sbjct: 517 SAVMHGLR------------REGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNV 564
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ +++E G +V++T+VI + + AL +L M PD + YT
Sbjct: 565 VGAK--KYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYT 622
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+ + + + +A EL ++L G+ P TY I+ C+ V+ +K++ M +
Sbjct: 623 TLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKM--I 680
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+P YN +++ LC +L+ ++ L+ +T I+I+ G+ + A
Sbjct: 681 ARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSA 740
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ + + L + ++ L G+ +A +L+ + ++ +
Sbjct: 741 YKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGI 787
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 165/356 (46%), Gaps = 28/356 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQF-CDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P F++ + AE + C + +L E E + L+ T R +D+
Sbjct: 135 SPNSRLLGFLVSSFAEKGKLHCATALLLQSYE----VEGCCMVVNSLLNTLVKLDRVEDA 190
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFV 194
+ LF + +F+ C D KT ++++ +C + + ELLG
Sbjct: 191 MKLFEEHLRFQS------------------CNDTKTFNILIRGLCGVGKAEKAVELLG-- 230
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIV 253
M G +V Y +I+ K ++ A + + +KS G PD+V YT +++G
Sbjct: 231 -GMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCK 289
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+A L D++L LG+ P T+NV ++G K + ++ M G PDV+T
Sbjct: 290 AGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVT 349
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
+ +L+ C+V ++N+ L +EM +G+ N TYSI+I+ L + +++A LL +
Sbjct: 350 FTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLA 409
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+K + Q M++ I G C+ G V +A+ ++++M K P + L++ K
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 140/330 (42%), Gaps = 34/330 (10%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS------------------------- 187
A ++ CM +DG + + ++SS E+ L
Sbjct: 122 AGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVEGCCMVVNSLLNTL 181
Query: 188 ------DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
++ + +E + C + +IR L K A+ +L M G PDI
Sbjct: 182 VKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDI 241
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDEL-LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
V Y ++ G + KA E+FD++ G PDV TY I+G CK ++ ++
Sbjct: 242 VTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLD 301
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M LG P +T+N L+ K E++ E+ +M G ++ T++ +IDG G
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+ + L EE +G+ + + I LC+ + KA ELL Q+A KD+ P ++
Sbjct: 362 QVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 421 ALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
++ K VN + + +V+++ CK
Sbjct: 422 P-VIDGFCKAGKVNEAIV-IVEEMEKKKCK 449
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 8/258 (3%)
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
+ G D T + ++S C+ + +L + +M +LG V + ++ K +
Sbjct: 270 SSGCSPDVVTYTSMISGYCKAGKMQEASVL--LDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ A I +M S G PD+V +T +++G + L++E+ G+ P+ +TY++
Sbjct: 328 MHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSI 387
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSK---PDVITYNTLLQALCKVRELNRLRELVKEMK 338
IN LCK+N + +K + +L SK P YN ++ CK ++N +V+EM+
Sbjct: 388 LINALCKENRL---LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEME 444
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
K + T++I+I G KG + EA + + + G + L + G+ +
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Query: 399 KALELLKQMADKDVSPGA 416
+A L + ++ GA
Sbjct: 505 EAYHLNQIAHKGQINDGA 522
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 20/163 (12%)
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
L + +TYN+ LCK + +M CM+ G P+ L+ + + +L+
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHC 156
Query: 330 LRELVKEMKWKGIVLNLQTYSI---------MIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L+ LQ+Y + +++ L + +A L EE L C
Sbjct: 157 ATALL-----------LQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCND 205
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ F+ I GLC G KA+ELL M+ P + L+
Sbjct: 206 TKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLI 248
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 161/337 (47%), Gaps = 28/337 (8%)
Query: 100 SSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLF--YKIPKFRI-----NRV- 150
S+V I + + +T + ++F LI Y ++ +D++ + K KFR+ +V
Sbjct: 49 SAVFAEILETKGTQTSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVL 108
Query: 151 -------------GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
GF E L C G+ ++++ S ++ ++ + +
Sbjct: 109 EHLMKLKYFKLVWGFYEESLEC----GYPASLYFFNILMHSFVKEGEIRLAQ--SVFDAI 162
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K G +V + ++ +K + + + N M++ G++PD+ Y++++NG+ +
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
A ELFDE+L GLVP+ T+ I+G CK V +++ M PD+ITYNTL
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LCK +L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENI 342
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ I GLCQ G A ++L++M + P
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 114/227 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G V A E++ ++L L PD+ TYN I GLCK+ +++ +I M G
Sbjct: 248 IDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 105/197 (53%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G + + ++++ + + + A+ +FD + GL P V ++N +NG K +++ G
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ M+ G +PDV TY+ L+ LCK +++ EL EM G+V N T++ +IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G ++ A + ++ L++ L ++ I GLC++G +++A +L+ +M+ K + P
Sbjct: 251 HCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 416 ARVWEALLLSSVSKLDF 432
+ L+ S + D
Sbjct: 311 KITYTTLIDGSCKEGDL 327
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E ++ M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E+ + M+++G +G T + ++ C+ R + + E+ ++M ++ Y
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEI---YKQMLSQSLSPDLITYNT 281
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L KK + A ++++M G+KPD + YT +++G + D A E ++
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKEN 341
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 332 ELVKEMKWKGIVLNLQT 348
+L+KEM+ G V ++ T
Sbjct: 402 KLLKEMQRDGYVPSVVT 418
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 156/363 (42%), Gaps = 54/363 (14%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRIN---------------RVGFAIEILNCMI 161
+I++ +I+++ + F + + ++ +N RV A+EI N +I
Sbjct: 229 YIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLI 288
Query: 162 NDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
G T C+L+L +C+ ++ G + EM +LGF ++++ L +K
Sbjct: 289 QKGLTASEVTYCTLVLG-LCKVQEFEVGA--GVMDEMIELGFVPTEAALSSLVEGLRRKG 345
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL------------- 267
KV DA ++N++K G P + Y ++N + + +AE LF E+
Sbjct: 346 KVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYS 405
Query: 268 ----------------------LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G+ VY YN ING CK N+ A + M +
Sbjct: 406 ILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDK 465
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G KP V++Y +L+ C +L+ L EM KGI N T++ +I L + +A
Sbjct: 466 GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDA 525
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L +E L + + ++ I G C+ G KA ELL QM K + P + L+ S
Sbjct: 526 FRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISS 585
Query: 426 SVS 428
S
Sbjct: 586 LCS 588
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 150/324 (46%), Gaps = 20/324 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGF---------------AIEILNC 159
+ F LI A+R D+ LF ++ + + N V + A E+LN
Sbjct: 507 YTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQ 566
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G D T ++SS+C + E F+ ++ + F + Y+ ++ K+
Sbjct: 567 MVQKGLVPDTYTYRPLISSLCSTGRVC--EAKKFIDDLHREHFKLNEMCYSALLHGYCKE 624
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ DALG+ +M G+ D+VCY ++++G I ++D L + L PD Y
Sbjct: 625 GRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIY 684
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+G K +V+ + M + G P+++TY TL+ LCK +++ L KEM
Sbjct: 685 TSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLV 744
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
N TY +D LA +G + +A L + L KGL + ++ + G C+ G V +
Sbjct: 745 SNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEE 803
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A +LL +M D + P + ++
Sbjct: 804 ATKLLDEMIDNAIFPDCITYSTII 827
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 3/292 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ AI L MI G + + +++ C+ +LS+ + F EM G
Sbjct: 413 RRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSA--AVSFFDEMIDKGLKPT 470
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT++I K K+ +A + ++M GI P+ +T +++ + A LFD
Sbjct: 471 VVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFD 530
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L ++P+ TYNV I G CK+ N +++ M + G PD TY L+ +LC
Sbjct: 531 EMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTG 590
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++ + ++ + LN YS ++ G +G + +A G+ E + +G+ +
Sbjct: 591 RVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYA 650
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
I G + LLK M D+ + P ++ + ++ SK V +F
Sbjct: 651 VLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTS-MIDGYSKAGSVKKAF 701
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 155/345 (44%), Gaps = 22/345 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y +I +L + C+ +D + RE+F+ E + L+ Y R +D
Sbjct: 574 PDTYTYRPLISSLCSTGRVCEAKKFIDDLH-REHFKLNEMCYSALLHGYCKEGRLRD--- 629
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
A+ + M+ G +D ++++ +++D S+ + G ++ M
Sbjct: 630 ---------------ALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSA--VFGLLKNM 672
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
V YT++I K V A GI + M +G P+IV YT ++N +
Sbjct: 673 HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLM 732
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
KAE L+ E+LV P+ TY +++ L ++ ++E +++ M + G + ++YN L
Sbjct: 733 DKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNIL 791
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++ CK+ + +L+ EM I + TYS +I +G++ A + LNKGL
Sbjct: 792 VRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGL 851
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ ++ I G C G + KA EL M + V P ++L
Sbjct: 852 KPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSL 896
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + A+ + MI+ G + + ++S C + L E EM G
Sbjct: 448 KLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH--EAFRLYHEMTGKGIAPN 505
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+T +I +L + ++ DA + ++M + P+ V Y +++ G + + VKA EL +
Sbjct: 506 TYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLN 565
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ GLVPD YTY I+ LC V K I + K + + Y+ LL CK
Sbjct: 566 QMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEG 625
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + +EM +G+ ++L Y+++IDG + D GLL+ ++ L ++
Sbjct: 626 RLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYT 685
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G V+KA + M D+ +P + L+
Sbjct: 686 SMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 157/340 (46%), Gaps = 27/340 (7%)
Query: 112 FETPEFI----FIDLIKTYADAHRFQDSVNLFYKI------PKFR-----------INRV 150
FE +FI F LI++Y R DSV +F + P+ R I RV
Sbjct: 150 FEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRV 209
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
+ + +++ G D ++ S CE ++ + + + +Q M+ +V Y
Sbjct: 210 DMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM--IQRMESSDL--NVVVYN 265
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY-TMVLNGVIVQEDYVKAEELFDELLV 269
+I L K ++V++A+ I N + G+ V Y T+VL VQE V A + DE++
Sbjct: 266 VLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAG-VMDEMIE 324
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
LG VP + + GL ++ V ++ ++++G+ P + YN L+ +LCK + +
Sbjct: 325 LGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDE 384
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L KEM KG+ N TYSI+ID +G + A L + + G+ ++ I
Sbjct: 385 AELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLIN 444
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G C+ G + A+ +M DK + P + +L+ +K
Sbjct: 445 GHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A I + MI++G + T + +++ +C+ + ELL +EM V Y
Sbjct: 700 AFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLW--KEMLVSNSTPNHVTYCCF 757
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L ++ + A+ + N M G+ + V Y +++ G +A +L DE++ +
Sbjct: 758 LDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAI 816
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY+ I C++ N++ I+ M G KPD + YN L+ C EL + E
Sbjct: 817 FPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFE 876
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
L +M +G+ N T+ + G + K I
Sbjct: 877 LRDDMIRRGVKPNQATHKSLSHGASRKFSI 906
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 148/338 (43%), Gaps = 75/338 (22%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDEL--------------------LGFVQEMKK 199
MI DG C DG V E RDL SD + LG +E+ +
Sbjct: 223 MIVDGLCKDGL--------VTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTR 274
Query: 200 LGFCFGMVD---------YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L C MVD Y +I +L KK + A + N M G +PD+V + +++G
Sbjct: 275 L-LC-DMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSG 332
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI-------------- 296
+ D V+A +LFD G+ PDV++YN+ I G CK N ++ +
Sbjct: 333 YCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPN 392
Query: 297 ---------------------KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
++ + + + G P+VITYN +L ALCK++ +++ EL
Sbjct: 393 IVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFN 452
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M +G+ N+ +Y+I+I+G I EA L EE + L S ++ I GLC+ G
Sbjct: 453 LMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSG 512
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
+ A EL M D P + +L + SK+ V
Sbjct: 513 RISHAWELFNVMHDGG-PPVDVITYNILFDAFSKIQHV 549
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 144/326 (44%), Gaps = 38/326 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +GFA +L ++ G+ ++ T + I+ +C ++ + L F + GF
Sbjct: 125 HLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVR--KALEFHDSVVAQGFLLD 182
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I L K +A +L++M+ ++P++V Y M+++G+ +A +L+
Sbjct: 183 EVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYS 242
Query: 266 ELLVLGLVPDV-----------------------------------YTYNVYINGLCKQN 290
+++ G+ PDV YTYN+ I+ LCK+
Sbjct: 243 DVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKG 302
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ M M E G +PD++T+NTL+ C ++ R+L GI ++ +Y+
Sbjct: 303 MLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYN 362
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+I G I EA L + K L + I GLC+ G + A EL + D
Sbjct: 363 ILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDG 422
Query: 411 DVSPGARVWEALLLSSVSKLDFVNTS 436
SP + ++L ++ K+ V+ +
Sbjct: 423 GPSPNVITYN-IMLDALCKIQLVDKA 447
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G D + ++++ C+ + DE L +M +V Y+++I L K ++
Sbjct: 353 GITPDVWSYNILIIGYCKNNRI--DEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRIS 410
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A + + + G P+++ Y ++L+ + + KA ELF+ + GL P+V +YN+ I
Sbjct: 411 YAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILI 470
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
NG CK ++ + + M PD +TYN L+ LCK ++ EL M G
Sbjct: 471 NGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPP 530
Query: 344 LNLQTYSIMIDGLASKGDII 363
+++ TY+I+ D + +I
Sbjct: 531 VDVITYNILFDAFSKIQHVI 550
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 111/253 (43%), Gaps = 35/253 (13%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV-------CY-------------- 244
+V++ ++ S+VK + A+ + QM GI P IV CY
Sbjct: 78 VVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLG 137
Query: 245 --------------TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
T ++ G+ + + KA E D ++ G + D TY INGLCK
Sbjct: 138 MVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIG 197
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+++ ME +P+V+ YN ++ LCK + R+L ++ +GI ++ TY+
Sbjct: 198 LTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYT 257
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I G G E LL + +++ + ++ I LC++G++ KA ++ M ++
Sbjct: 258 CLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIER 317
Query: 411 DVSPGARVWEALL 423
P + L+
Sbjct: 318 GQRPDLVTFNTLM 330
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 99/204 (48%)
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ + DA+ + ++ + P +V + M+L ++ + Y A L ++ + G+ P + T
Sbjct: 57 DAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTL 116
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
++ IN C ++ ++ + + G + + IT T+++ LC E+ + E +
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA 176
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G +L+ TY +I+GL G EA LL + + + +++ + GLC+ GLV +
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTE 236
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A +L + + + P + L+
Sbjct: 237 ARDLYSDVVGRGIDPDVFTYTCLI 260
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 146/296 (49%), Gaps = 28/296 (9%)
Query: 129 AHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI-LSSVCEQRDLSS 187
A +F D V +F+++R+ + I +G C G+T + I L E+R +
Sbjct: 158 ALKFHDDVVAL----EFQLDRISYGTLI------NGLCKIGETKAAIQLMRNLEERSIKP 207
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +V Y +I SL K + V +A + ++M + I P++V YT +
Sbjct: 208 D-----------------VVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTL 250
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G + ++A L +E+ + + PDVYT+++ I+ L K+ ++A ++A M +
Sbjct: 251 IYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYV 310
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPDV+TYN+L+ V E+ + + M G+ +Q+Y+IMIDGL + EA
Sbjct: 311 KPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAIS 370
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L EE +K + + F+ I GLC+ G + +L+ +M D+ + +L+
Sbjct: 371 LFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 112/218 (51%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +++ +V A + N M G+ P + YT++++G+ + +A LF+
Sbjct: 314 VVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFE 373
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ ++P+ T+N I+GLCK + ++ M + DVITY++L+ ALCK
Sbjct: 374 EMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNC 433
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L++ L K+M + I ++ TY+I+IDGL G + A + + L KG +
Sbjct: 434 HLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYT 493
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ GL +AL LL +M D P A ++ ++
Sbjct: 494 VMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIII 531
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
M + G G+ YT +I L K + V +A+ + +MK + P+ + + +++G+
Sbjct: 338 NSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKS 397
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+L D++ + DV TY+ I+ LCK +++ I + M +PD+ TY
Sbjct: 398 GRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTY 457
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
L+ LCK L +E+ + + KG L+++TY++MI G G EA LL + +
Sbjct: 458 TILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMED 517
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G + FD IC L ++ KA +LL++M
Sbjct: 518 NGCIPNAITFDIIICALFEKDENDKAEKLLREM 550
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ +L + G PD++ T ++ G+ ++ + KA + D+++ L D +Y IN
Sbjct: 123 SFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLIN 182
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLCK +A I+++ +EE KPDV+ YN ++ +LCK + + L EM K I
Sbjct: 183 GLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYP 242
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ TY+ +I G G +IEA LL E K + F I L + G ++ A +L
Sbjct: 243 NVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVL 302
Query: 405 KQMADKDVSPGARVWEALL 423
M V P + +L+
Sbjct: 303 AVMMKAYVKPDVVTYNSLV 321
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 124/252 (49%), Gaps = 4/252 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++I+ S+C+ + + E EM +V YT +I + +A+ +LN+M
Sbjct: 213 NIIIDSLCKNKLVG--EACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEM 270
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV-PDVYTYNVYINGLCKQNN 291
K I PD+ ++++++ + +E +KA ++ +++ V PDV TYN ++G N
Sbjct: 271 KLKNINPDVYTFSILIDA-LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNE 329
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
V+ + M + G P V +Y ++ LCK + ++ L +EMK K ++ N T++
Sbjct: 330 VKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNS 389
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+IDGL G I L+++ ++ + I LC+ + +A+ L K+M ++
Sbjct: 390 LIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQE 449
Query: 412 VSPGARVWEALL 423
+ P + L+
Sbjct: 450 IQPDMYTYTILI 461
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 158/366 (43%), Gaps = 9/366 (2%)
Query: 14 LRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSI 73
+R + + P ++ +D + V ++ +QI ++L++ F I
Sbjct: 197 MRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCI 256
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYA--DAHR 131
C A +K N S ++D + K + + + ++K Y D
Sbjct: 257 MGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVT 316
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
+ V+ + F +N V A + N M G ++ ++++ +C+ + + DE +
Sbjct: 317 YNSLVDGY-----FLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMV--DEAI 369
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+EMK + + ++I L K ++ ++++M+ D++ Y+ +++ +
Sbjct: 370 SLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDAL 429
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+A LF +++ + PD+YTY + I+GLCK ++ ++ + G D+
Sbjct: 430 CKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDI 489
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
TY ++ CK + L+ +M+ G + N T+ I+I L K + +A LL E
Sbjct: 490 RTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLRE 549
Query: 372 ALNKGL 377
+ +GL
Sbjct: 550 MIARGL 555
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 138/295 (46%), Gaps = 20/295 (6%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILSSV 179
LIK D R D++++ ++ R+ +G+ ++ N +I G CV+ K+ +
Sbjct: 135 LIKGLCDGKRTDDAMDMVFR----RMPELGYTPDVFSYNALIK-GLCVEKKSQEAL---- 185
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
ELL + +V Y+ +I K+ +V A + ++M G P
Sbjct: 186 ---------ELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPP 236
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D+V Y+ +++G+ + KAE + + G++P+ TYN+ I G C +E ++++
Sbjct: 237 DVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLL 296
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M G +PDV+TY L+Q CK+ R + M KG N Y I++ G A+K
Sbjct: 297 KKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATK 356
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G +I+ LL+ + G+ + F+ IC + G V KA+ +M + P
Sbjct: 357 GALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRP 411
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 131/256 (51%), Gaps = 2/256 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++L+ MI DG + + ++++ + + + D+ + EM++ G +V Y+ VI
Sbjct: 364 DLLDLMIRDGIPFEHRAFNILICAYAKHG--AVDKAMTAFTEMRQNGLRPDVVSYSTVIH 421
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L K +V DA+ NQM S+G+ P+I+ +T +++G+ ++ K EEL E++ G+ P
Sbjct: 422 ILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 481
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D N ++ LCK+ V + +G KP+V++YNTL+ C V +++ +
Sbjct: 482 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQF 541
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M G+ + TY+ +++G G + +A L E K + + + + GL Q
Sbjct: 542 DRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQA 601
Query: 395 GLVRKALELLKQMADK 410
G + A EL +M D+
Sbjct: 602 GRIVAARELYMKMVDR 617
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 155/370 (41%), Gaps = 20/370 (5%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P YH ++ A D+ +LD + R+ F LI YA ++
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLD-LMIRDGIPFEHRAFNILICAYAKHGAVDKAM 398
Query: 137 NLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
F ++ + +I RV A+ N M+++G + + + ++ +
Sbjct: 399 TAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 458
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C + E L F EM G + ++ +L K+ +V +A + + G+KP
Sbjct: 459 CSIGEWKKVEELAF--EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP 516
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++V Y +++G ++ + FD ++ +GL PD +TYN +NG K VE + +
Sbjct: 517 NVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALY 576
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M K IT N +L L + + REL +M +G L ++TY+ ++ GL
Sbjct: 577 REMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCEN 636
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ EA + E+ +K F+ I L + G + +A L M + P +
Sbjct: 637 SCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITY 696
Query: 420 EALLLSSVSK 429
++ S + +
Sbjct: 697 SLMIKSRIEE 706
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 133/291 (45%), Gaps = 4/291 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A IL M + G + +T ++++ C L +E + +++M G +V Y +
Sbjct: 257 AEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQL--EEAVRLLKKMSGSGLQPDVVTYILL 314
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ K + +A + + M G KP+ Y ++L+G + + +L D ++ G+
Sbjct: 315 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 374
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ +N+ I K V+ + M + G +PDV++Y+T++ LCK+ +
Sbjct: 375 PFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVY 434
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+M +G+ N+ +++ +I GL S G+ + L E +N+G+ + + + LC
Sbjct: 435 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 494
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
+ G V +A + + V P + L+ V K+D F R+V
Sbjct: 495 KEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMV 545
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 23/270 (8%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+C GK DE + M +G Y ++ K +V
Sbjct: 526 DGYCFVGKM----------------DESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRV 569
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DAL + +M +K + ++L+G+ V A EL+ +++ G + TYN
Sbjct: 570 EDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 629
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKP---DVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ GLC+ + V+ ++M E+L SK DV T+N ++ AL KV ++ + L M
Sbjct: 630 LGGLCENSCVDEALRMF---EDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVL 686
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G V ++ TYS+MI +G + E+ L G S M + I L ++G VR+
Sbjct: 687 RGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRR 746
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSK 429
A L ++ +K+ S A ALL+ VS+
Sbjct: 747 AGTYLTKIDEKNFSVEAST-AALLIPIVSE 775
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 72/151 (47%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y V+ L + V +AL + ++S + D+ + +V+N ++ +A+ LF ++
Sbjct: 626 YNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMV 685
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ G VP V TY++ I ++ +E + ME+ G D N +++ L + ++
Sbjct: 686 LRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVR 745
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
R + ++ K + T +++I ++ K
Sbjct: 746 RAGTYLTKIDEKNFSVEASTAALLIPIVSEK 776
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 156/310 (50%), Gaps = 5/310 (1%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI---NRVGFAIEILNCMINDGFCVDGKTCS 173
F LI Y + + ++F KI K + +V A+ + ++ GF ++ T
Sbjct: 103 FTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYG 162
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++++ +C+ + L +++++ +V Y+ +I L K + V DA G+ ++M
Sbjct: 163 ILINGLCKMGQTRA--ALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMI 220
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
I P +V ++ ++ G + + A LF+E+++ + PD YT+N+ ++ LCK+ ++
Sbjct: 221 VKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIK 280
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+IA M + G +P V+TYNTL+ C V E+ + + ++ + + N ++Y+IMI
Sbjct: 281 EAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMI 340
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+G + EA L E +G+ ++ I GLC+ G + A EL+ +M + +
Sbjct: 341 NGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIP 400
Query: 414 PGARVWEALL 423
+ +L+
Sbjct: 401 ADIVTYNSLI 410
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 20/305 (6%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
F LI + +F+D+ LF ++ IN + IL D C +GK
Sbjct: 231 FSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILV----DALCKEGKI------- 279
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
E + M K G +V Y ++ +V A +L+ + +
Sbjct: 280 ---------KEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVA 330
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P+ Y +++NG + +A LF E+ G+ P TYN I+GLCK + ++
Sbjct: 331 PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWEL 390
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M D++TYN+L+ CK + +++ LVK++K GI N+ TY+I+IDGL
Sbjct: 391 VDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCK 450
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + A + ++ L KG + ++ I GLC+ GL +A LL +M D + P A
Sbjct: 451 GGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVT 510
Query: 419 WEALL 423
+E ++
Sbjct: 511 YETII 515
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 150/327 (45%), Gaps = 44/327 (13%)
Query: 55 QQIPKQPHILSSLLHSFSIY----------------NCEPPPEAYHFVIKTLAENSQFCD 98
++IP SSL++ F I N P ++ ++ L + + +
Sbjct: 222 KRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKE 281
Query: 99 ISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILN 158
+V+ + +E E + L+ Y + + ++ I + R V N
Sbjct: 282 AKNVIA-VMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR---VAPNSRSYN 337
Query: 159 CMINDGFC----VDGKTCSLILSSVC----EQRDLSSDELLGFVQEMKKLGFCFGMVD-- 208
MIN GFC VD C + +C ++ + L+ + + ++ + + +VD
Sbjct: 338 IMIN-GFCKIKMVDEALC--LFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM 394
Query: 209 -----------YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
Y ++I K + V A+ ++ ++K GI+P++ Y ++++G+
Sbjct: 395 HNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQL 454
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
A+++F +LL+ G + +TYN+ INGLCK+ + +++ ME+ G PD +TY T+
Sbjct: 455 KNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETI 514
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVL 344
+QAL E + ++L++EM KG+V+
Sbjct: 515 IQALFHKDENEKAQKLLREMVIKGVVV 541
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 22/240 (9%)
Query: 206 MVDYTNVIRSLVKKEKVF-DALGILNQMKSDGIKPDIVCYTMVLN--------------- 249
+V++ ++ L+K + + L + QM+S G+KPD+ ++++N
Sbjct: 66 IVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVF 125
Query: 250 ------GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
G+ + +A D +L LG + TY + INGLCK A ++++ +E
Sbjct: 126 AKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIE 185
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+V+ Y+T++ LCK + + L EM K I + T+S +I G G
Sbjct: 186 GKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFK 245
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A L E + K + + F+ + LC+ G +++A ++ M + V P + L+
Sbjct: 246 DAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLM 305
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 2/244 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+N VG A +L+ + + ++ +++++ C+ + + DE L EM G
Sbjct: 311 VNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMV--DEALCLFHEMCCRGIAPHK 368
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K ++ A ++++M ++ I DIV Y +++ + KA L +
Sbjct: 369 VTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKK 428
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ P++ TYN+ I+GLCK ++ + + G + TYN ++ LCK
Sbjct: 429 IKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGL 488
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ L+ +M+ GI+ + TY +I L K + +A LL E + KG+ +
Sbjct: 489 FDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRR 548
Query: 387 TICG 390
T+ G
Sbjct: 549 TLVG 552
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 22/144 (15%)
Query: 302 MEELGSKPDVITYNTLLQALCKVR-ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M ++ P ++ +N +L L K + + L +M+ KG+ +L T SI+I+ G
Sbjct: 57 MRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLG 116
Query: 361 DIIEACGLLEEALNKGLC-----TQSSMFDET----------------ICGLCQRGLVRK 399
+ A + + L GLC ++ +F + I GLC+ G R
Sbjct: 117 QMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRA 176
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL++L+Q+ K V+ ++ ++
Sbjct: 177 ALQVLRQIEGKLVNTNVVMYSTII 200
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 127/237 (53%), Gaps = 2/237 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +G AI++L M G + + + +L C+++ + + + ++ +M G
Sbjct: 201 RKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKM--ERAIEYLGKMTSRGCYPD 258
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ +L K KV A+ +LNQ+ S G P ++ Y V++G+ +A +L D
Sbjct: 259 IVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLD 318
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL PD+ TY+ + GL ++ V+ IK +E LG KP+ ITYN ++ LCK R
Sbjct: 319 EMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKAR 378
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ +R + + M +G +Y+I+I+GLA +G EA LL E +G+ +SS
Sbjct: 379 KTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSS 435
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 128/278 (46%), Gaps = 35/278 (12%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
R+ +E F++ M G ++ T++IR K K A I+ ++ G PD++
Sbjct: 96 RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN------------------ 284
Y ++++G+ ++ AE+L +++ G P V T+N+ IN
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215
Query: 285 -----------------GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G CK+ +E I+ + M G PD++TYNTLL ALCK ++
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ EL+ ++ KG L TY+ +IDGL+ G +A LL+E KGL +
Sbjct: 276 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSL 335
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ GL + G V +A++ + V P A + A++L
Sbjct: 336 VGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLG 373
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 141/279 (50%), Gaps = 4/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCF 204
+I + A I+ + + G D T ++++S +C R + +++LL +M + G
Sbjct: 131 KIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLA---DMVRRGCSP 187
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V + +I L +K + A+ +L +M G P+ + Y +L+G ++ +A E
Sbjct: 188 SVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYL 247
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G PD+ TYN + LCK V+A ++++ + G P +ITYNT++ L KV
Sbjct: 248 GKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 307
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ ++ +L+ EM+ KG+ ++ TYS ++ GL+ +G + EA + G+ + +
Sbjct: 308 GKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITY 367
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + GLC+ +A++ L M + P + L+
Sbjct: 368 NAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILI 406
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 2/230 (0%)
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
F ++ N + LV+ ++ + L M G PDI+ T ++ G KA +
Sbjct: 82 FEEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRI 141
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+ + G VPDV TYNV I+G+C K++A M G P V+T+N L+ LC+
Sbjct: 142 MEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCR 201
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
L R +++++M G N +Y+ ++ G + + A L + ++G
Sbjct: 202 KGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVT 261
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
++ + LC+ G V A+ELL Q++ K SP + ++ LS V K D
Sbjct: 262 YNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTD 311
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 2/260 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L M+ G T +++++ +C + L + +++M K G + Y +
Sbjct: 173 AEKLLADMVRRGCSPSVVTFNILINFLCRKGLLG--RAIDVLEKMPKHGCTPNSLSYNPL 230
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K++K+ A+ L +M S G PDIV Y +L + A EL ++L G
Sbjct: 231 LHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGC 290
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P + TYN I+GL K + K++ M G KPD+ITY++L+ L + +++ +
Sbjct: 291 SPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIK 350
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+++ G+ N TY+ ++ GL A L + +G + + I GL
Sbjct: 351 FFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLA 410
Query: 393 QRGLVRKALELLKQMADKDV 412
GL ++ALELL ++ + V
Sbjct: 411 YEGLAKEALELLNELCLRGV 430
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + K G +V Y
Sbjct: 128 GFYKEILEC----GYPXSLYFFNILMHRFCKDGDIRVAX--SVFDAITKWGLRPSVVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYN L+ LCK +L +
Sbjct: 242 GLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +G++ A + + + + I G
Sbjct: 302 NDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L+ M + P A + ++
Sbjct: 362 LCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMII 394
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 115/226 (50%), Gaps = 1/226 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A +FD + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWG 172
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDAN 232
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG+V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 233 ELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGL 292
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
C++G +++A +L+ +M+ K + P ++ L+ K +BT+F
Sbjct: 293 CKKGDLKQANDLIXEMSMKGLKPD-KITYTTLIDGCCKEGNLBTAF 337
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M G D T S++++ +C++ + D+ EM G
Sbjct: 189 RLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKM--DDANELFDEMLVKGLVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L
Sbjct: 247 XVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIX 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ N++ + M E + D + Y L+ LC+
Sbjct: 307 EMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++ M G+ + TY+++I+ KGD+ + LL+E G
Sbjct: 367 RXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 79/150 (52%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I L KK + A ++ +M G+KPD + YT +++G + + A E
Sbjct: 282 LITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRX 341
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + D Y I+GLC++ KM+ M +G KPD TY ++ CK
Sbjct: 342 RMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKG 401
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ + +L+KEM+ G V ++ TY+++++G
Sbjct: 402 DVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|15231160|ref|NP_187922.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75311241|sp|Q9LK58.1|PP225_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13150
gi|10172602|dbj|BAB01406.1| unnamed protein product [Arabidopsis thaliana]
gi|66792658|gb|AAY56431.1| At3g13150 [Arabidopsis thaliana]
gi|332641781|gb|AEE75302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 164/328 (50%), Gaps = 28/328 (8%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y I+ L E +F I VL + +K ++ ++ +F+ I ++ Y + + + LF ++
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFV-IRIMLLYGYSGMAEHAHKLFDEM 148
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM-KKLG 201
P+ LNC K+ + +LS+ + L DE + +E+ +KLG
Sbjct: 149 PE------------LNCERT------VKSFNALLSAYVNSKKL--DEAMKTFKELPEKLG 188
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V Y +I++L +K + D L I +++ +G +PD++ + +L +E +V+ +
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
++D + L P++ +YN + GL + + +I M+ G PDV TYN L+ A
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Query: 322 CKVRELNRLRELVK---EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
R N L E++K EMK KG+ + TY ++I L KGD+ A + EEA+ L
Sbjct: 309 ---RVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQ 406
++ +M+ + L G + +A +L+K
Sbjct: 366 SRPNMYKPVVERLMGAGKIDEATQLVKN 393
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 209 YTNVIRSLVKKEKVFDALGILN-QMKSDGIKP-DIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y+ IR L + +K +L Q K D IK D V M+L G ++ A +LFDE
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEH--AHKLFDE 147
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-EELGSKPDVITYNTLLQALCKVR 325
+ L V ++N ++ ++ +K + E+LG PD++TYNT+++ALC+
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + + +E++ G +L +++ +++ + +E + + +K L ++
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYN 267
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ GL + AL L+ M + +SP + AL+ +
Sbjct: 268 SRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 137/273 (50%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G V Y
Sbjct: 103 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSAVSYN 156
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A+ELFDE+LV
Sbjct: 157 TLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVK 216
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 217 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 276
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ +M KG+ + TY+ +IDG +G ++ A + + + + ++ I G
Sbjct: 277 HDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISG 336
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M ++P + ++
Sbjct: 337 LCQEGRSVDAEKMLREMLSVGLNPDTGTYTMII 369
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 206 ADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLLPDLITYNTL 263
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A +++ M G+KPD + YT +++G + V A E L+ +
Sbjct: 264 IYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENI 323
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G PD TY ++ CK ++ + +
Sbjct: 324 RLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSK 383
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L+KEM+ G V ++ TY+++++G
Sbjct: 384 LLKEMQRDGHVPSVVTYNVLMNG 406
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
L MI GF VD T SLI+ CE+ ++ L + + ++G ++++T +I L
Sbjct: 225 LGGMIERGFVVDNATLSLIVREFCEKGFVT--RALWYFRRFCEMGLRPNLINFTCMIEGL 282
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLGLVPD 275
K+ V A +L +M G KP++ +T +++G+ + KA LF +L+ P+
Sbjct: 283 CKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPN 342
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V TY I+G C+ + +++ M+E G P+ TY TL+ CK R EL+
Sbjct: 343 VLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMN 402
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M +G N+ TY+ ++DGL KG + EA +L+ GL + I C++
Sbjct: 403 VMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQA 462
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+++AL L +M + P + L+
Sbjct: 463 EIKQALVLFNKMVKSGIQPDIHSYTTLI 490
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 150/301 (49%), Gaps = 4/301 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M+ G+ + T + ++ +C ++ + F++ ++ ++ YT +
Sbjct: 291 AFEMLEEMVGRGWKPNVYTHTALIDGLC-KKGWTEKAFRLFLKLVRSENHKPNVLTYTAM 349
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + EK+ A +L++MK G+ P+ YT +++G ++ +A EL + + G
Sbjct: 350 ISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGF 409
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V TYN ++GLCK+ V+ K++ G D +TY L+ CK E+ +
Sbjct: 410 SPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALV 469
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +M GI ++ +Y+ +I + + E+ EEA+ GL + + ICG C
Sbjct: 470 LFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYC 529
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ G +R AL+ +M+D + + + AL+ L SKLD + ++++ L TPC+
Sbjct: 530 REGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGL-TPCE 588
Query: 451 M 451
+
Sbjct: 589 V 589
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 149/338 (44%), Gaps = 66/338 (19%)
Query: 110 ENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG 169
+NFE + ++K++A+ I RV AIE++ M N G
Sbjct: 126 KNFEKAHEVMQCMVKSFAE------------------IGRVKEAIEMVIEMHNQGLAPST 167
Query: 170 KTCSLILSSVCEQ------------------------------------RDLSSDELLGF 193
KT + ++ V E L SD LG
Sbjct: 168 KTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLG- 226
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
M + GF + ++R +K V AL + G++P+++ +T ++ G+
Sbjct: 227 --GMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCK 284
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM-IACMEELGSKPDVI 312
+ +A E+ +E++ G P+VYT+ I+GLCK+ E ++ + + KP+V+
Sbjct: 285 RGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 344
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL--- 369
TY ++ C+ ++NR L+ MK +G+ N TY+ +IDG G+ A L+
Sbjct: 345 TYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVM 404
Query: 370 -EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
EE + +CT +++ D GLC++G V++A ++LK
Sbjct: 405 NEEGFSPNVCTYNAIVD----GLCKKGRVQEAYKVLKS 438
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 1/213 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+++S + +V +A+ ++ +M + G+ P V+ V AE LFDE+ G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ +Y V + G CK NV + + M E G D T + +++ C+ + R
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ G+ NL ++ MI+GL +G + +A +LEE + +G I GL
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317
Query: 392 CQRGLVRKALEL-LKQMADKDVSPGARVWEALL 423
C++G KA L LK + ++ P + A++
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMI 350
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 53/215 (24%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL---GFCFGM--- 206
A E++N M +GF + T + I+ +C++ G VQE K+ GF G+
Sbjct: 397 AYELMNVMNEEGFSPNVCTYNAIVDGLCKK---------GRVQEAYKVLKSGFRNGLDAD 447
Query: 207 -VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF- 264
V YT +I K+ ++ AL + N+M GI+PDI YT ++ V +E +K E+F
Sbjct: 448 KVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLI-AVFCREKRMKESEMFF 506
Query: 265 DELLVLGLVP-----------------------------------DVYTYNVYINGLCKQ 289
+E + GLVP D TY I+GLCKQ
Sbjct: 507 EEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQ 566
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ ++ + M E G P +T TL CK+
Sbjct: 567 SKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKI 601
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 161/363 (44%), Gaps = 27/363 (7%)
Query: 69 HSFSIYN------CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
H + YN C P Y +++++L + +F + SV + + F + L
Sbjct: 35 HVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAA-QGCSPNVFSYSIL 93
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
I R +V A E+LN MI+ G + T +LS +C+
Sbjct: 94 IAGLC------------------RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
L E + M G V Y +I KK + +A + +M G P +
Sbjct: 136 GKLK--EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +L+G + ++ + + LF ++L G VP+++T+N ++G CK ++ ++ M
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
LG PDV++YNTL++ +C + + + L++EM G+ ++ +Y+I+IDG + G +
Sbjct: 254 RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A L E GL + + I LC+ G V A + K M +P A V L
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPL 373
Query: 423 LLS 425
++
Sbjct: 374 VIG 376
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G + Y ++ L K + G N M G P+ Y +L + + + +A +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ G P+V++Y++ I GLC+ V+ +++ M + G +P+V+TY +LL LCK+
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L +L M ++G + Y+++IDG + KGD+ EA L EE L KG +
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ + G ++G + L K M + P + LL D V + L +
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255
Query: 445 LNTP 448
L P
Sbjct: 256 LGCP 259
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 134/274 (48%), Gaps = 3/274 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S++++ +C R DE + EM G +V Y +++ L K K+ +A+ + ++M
Sbjct: 91 SILIAGLC--RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G PD V Y ++++G + D +A LF+E+L G +P V+TYN ++G ++
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ M G P++ T+N LL CK+ ++ L EM+ G ++ +Y+ +
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ G+ SKG EA LL E + G+ ++ I G + G + A++L ++ +
Sbjct: 269 MRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
P A + + ++ + + V +F+ D I N
Sbjct: 329 EPDAFSY-STIIDCLCRAGKVGAAFVVFKDMIAN 361
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D + G +M G Y ++RSL + ++ +A + M + G P++ Y+++
Sbjct: 34 DHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSIL 93
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G+ + +A EL +E++ G P+V TY ++GLCK ++ + + + M G
Sbjct: 94 IAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGC 153
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD + YN L+ K ++ L +EM KG + + TY+ ++ G + KG+
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L ++ L +G F+ + G C+ G + +A L +M P + L+
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMC 273
Query: 428 SK 429
SK
Sbjct: 274 SK 275
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L C+ D+ L EM+ LG +V Y ++R + K K +A +L +M
Sbjct: 233 LLDGFCKMGDMVEAHRL--FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIR 290
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+ PDIV Y ++++G A +LF E+ GL PD ++Y+ I+ LC+ V A
Sbjct: 291 SGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGA 350
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ M GS PD L+ LC+ L EL + M V + Y++++
Sbjct: 351 AFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMY 410
Query: 355 GLASKGDIIEACGLLEEALNKGL 377
L + C + E +G
Sbjct: 411 KLCKAKRSDDVCEIFHELTERGF 433
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 2/169 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +L MI G D + ++++ + L D + E+ K G Y+ +
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL--DHAIKLFYEIPKSGLEPDAFSYSTI 338
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + KV A + M ++G PD ++ G+ E ++ ELF ++
Sbjct: 339 IDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFEC 398
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
VP + YN+ + LCK + ++ + E G PDV +L+ L
Sbjct: 399 VPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 152/314 (48%), Gaps = 19/314 (6%)
Query: 127 ADAHRFQDSVNLFYKIPKFR-----------------INRVGFAIEILNCMINDGFCVDG 169
+D + D+V+LF + K R +N+ I + M G D
Sbjct: 59 SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T S+ ++ C + LS L + +M KLG+ +V ++++ +++ DA+ ++
Sbjct: 119 YTYSIFINCFCRRSQLSL--ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+QM G KPD +T +++G+ + +A L D+++ G PD+ TY +NGLCK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+++ + ++ ME+ + DV+ YNT++ LCK + ++ L EM KGI ++ TY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
S +I L + G +A LL + + + + F I + G + +A +L +M
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 410 KDVSPGARVWEALL 423
+ + P + +L+
Sbjct: 357 RSIDPDIFTYSSLI 370
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ D T S +L+ C + +S + + V +M ++G+
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS--DAVALVDQMVEMGYKPD 187
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+T +I L K +A+ +++QM G +PD+V Y V+NG+ + D A L
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV YN I+GLCK +++ + + M+ G +PDV TY++L+ LC
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I N+ T+S +ID +G ++EA L +E + + + +
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A + + M KD P + L+
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 170/394 (43%), Gaps = 55/394 (13%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF-- 139
Y I SQ +VL + K +E L+ Y + R D+V L
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 140 -----YKIPKFRI----------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
YK F N+ A+ +++ M+ G D T +++ +C++ D
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI--- 241
+ D L +++M+K +V Y +I L K + + DAL + +M + GI+PD+
Sbjct: 239 I--DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 242 --------------------------------VCYTMVLNGVIVQEDYVKAEELFDELLV 269
V ++ +++ + + V+AE+L+DE++
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD++TY+ ING C + ++ M M P+V+TY+TL++ CK + +
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL +EM +G+V N TY+ +I G D A + ++ ++ G+ ++ +
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G + KA+ + + + + P + ++
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 21/349 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C+P Y V+ L + S+L +EK + E I+ +I D
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHMDD 276
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
++NLF + M N G D T S ++S +C S L +
Sbjct: 277 ALNLFTE------------------MDNKGIRPDVFTYSSLISCLCNYGRWSDASRL--L 316
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+M + +V ++ +I + VK+ K+ +A + ++M I PDI Y+ ++NG +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A+ +F+ ++ P+V TY+ I G CK VE G+++ M + G + +TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
TL+ + R+ + + + K+M G+ N+ TY+I++DGL G + +A + E
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I G+C+ G V EL ++ K VSP + ++
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 147/336 (43%), Gaps = 41/336 (12%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D IE++ N P + F LI + + +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN---PNVVTFSALIDAFVKEGKLVE 346
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCS 173
+ L+ ++ K I+ F + +IN GFC+ + T S
Sbjct: 347 AEKLYDEMIKRSIDPDIFT---YSSLIN-GFCMHDRLDEAKHMFELMISKDCFPNVVTYS 402
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ C+ + + +E + +EM + G V YT +I + +A + QM
Sbjct: 403 TLIKGFCKAKRV--EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
S G+ P+I+ Y ++L+G+ KA +F+ L + PD+YTYN+ I G+CK VE
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G ++ + G P+VI YNT++ C+ L+K+MK G + N TY+ +I
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 354 DGLASKGDI---------IEACGLLEEALNKGLCTQ 380
GD + +CG +A GL T
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Query: 203 CF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
CF +V Y+ +I+ K ++V + + + +M G+ + V YT +++G D A+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+F +++ +G+ P++ TYN+ ++GLCK + + + ++ +PD+ TYN +++ +
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK ++ EL + KG+ N+ Y+ MI G KG EA LL++ G S
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 382 SMFDETICGLCQRGLVRKALELLKQM 407
++ I + G + EL+K+M
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEM 599
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 110/217 (50%), Gaps = 1/217 (0%)
Query: 208 DYTNVIRS-LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
DY ++R+ L KV DA+ + M P IV + +L+ V + L ++
Sbjct: 49 DYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQ 108
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ LG+ D+YTY+++IN C+++ + + ++A M +LG +PD++T ++LL C +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ LV +M G + T++ +I GL EA L+++ + +G +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+RG + AL LLK+M + ++ ++
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 102/211 (48%), Gaps = 2/211 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ RV +E+ M G + T + ++ + RD + +++ ++M +G
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV--FKQMVSVGVHPN 467
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y ++ L K K+ A+ + ++ ++PDI Y +++ G+ ELF
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L + G+ P+V YN I+G C++ + E ++ M+E G P+ TYNTL++A +
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ EL+KEM+ G + T ++ + L
Sbjct: 588 DREASAELIKEMRSCGFAGDASTIGLVTNML 618
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 161/363 (44%), Gaps = 27/363 (7%)
Query: 69 HSFSIYN------CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
H + YN C P Y +++++L + +F + SV + + F + L
Sbjct: 35 HVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAA-QGCSPNVFSYSIL 93
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
I R +V A E+LN MI+ G + T +LS +C+
Sbjct: 94 IAGLC------------------RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
L E + M G V Y +I KK + +A + +M G P +
Sbjct: 136 GKLK--EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +L+G + ++ + + LF ++L G VP+++T+N ++G CK ++ ++ M
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
LG PDV++YNTL++ +C + + + L++EM G+ ++ +Y+I+IDG + G +
Sbjct: 254 RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A L E GL + + I LC+ G V A + K M +P A V L
Sbjct: 314 DHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPL 373
Query: 423 LLS 425
++
Sbjct: 374 VIG 376
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G + Y ++ L K + G N M + G P+ Y +L + + + +A +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ G P+V++Y++ I GLC+ V+ +++ M + G +P+V+TY +LL LCK+
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L +L M ++G + Y+++IDG + KGD+ EA L EE L KG +
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ + G ++G + L K M + P + LL D V + L +
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255
Query: 445 LNTP 448
L P
Sbjct: 256 LGCP 259
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 134/274 (48%), Gaps = 3/274 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S++++ +C R DE + EM G +V Y +++ L K K+ +A+ + ++M
Sbjct: 91 SILIAGLC--RGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G PD V Y ++++G + D +A LF+E+L G +P V+TYN ++G ++
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ M G P++ T+N LL CK+ ++ L EM+ G ++ +Y+ +
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G+ SKG EA LL E + G+ ++ I G + G + A++L ++ +
Sbjct: 269 IRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
P A + + ++ + + V +F+ D I N
Sbjct: 329 EPDAFSY-STIIDCLCRAGKVGAAFVVFKDMIAN 361
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D + G +M G Y ++RSL + ++ +A + M + G P++ Y+++
Sbjct: 34 DHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSIL 93
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G+ + +A EL +E++ G P+V TY ++GLCK ++ + + + M G
Sbjct: 94 IAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGC 153
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD + YN L+ K ++ L +EM KG + + TY+ ++ G + KG+
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L ++ L +G F+ + G C+ G + +A L +M P + L+
Sbjct: 214 LFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMC 273
Query: 428 SK 429
SK
Sbjct: 274 SK 275
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L C+ D+ L EM+ LG +V Y +IR + K K +A +L +M
Sbjct: 233 LLDGFCKMGDMVEAHRL--FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIR 290
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+ PDIV Y ++++G A +LF E+ GL PD ++Y+ I+ LC+ V A
Sbjct: 291 SGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGA 350
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ M GS PD L+ LC+ L EL + M V + Y++++
Sbjct: 351 AFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMY 410
Query: 355 GLASKGDIIEACGLLEEALNKGL 377
L + C + E +G
Sbjct: 411 KLCKAKRSDDVCEIFHELTERGF 433
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 134/283 (47%), Gaps = 9/283 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+ A I M+++G D T +++++ +C R+ + + +++K+G+
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPD 577
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT + L K +V A+ +L + S G D+V YT + G+ Q +A LF
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G PD Y INGL K +E K M G KP V TY L+QALC
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697
Query: 326 ELNRLRELVKEMKWKG-IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG----LCTQ 380
++ + M +G +V ++ Y +I G + A L E+ +++G T
Sbjct: 698 NVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+S+FD GL + G KA ELL++MA P A + A+L
Sbjct: 758 ASLFD----GLVRSGKTEKAQELLQEMAAGGSPPHAATFTAIL 796
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 165/387 (42%), Gaps = 66/387 (17%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFR--------------INRVGF---AIEILNC 159
F F LI+++A R D+V F + + R + + G A E+ +
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHE 214
Query: 160 MINDGFCVDGKT--CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
M+ GF + +++ + + +R + E+ G +M+K GF + Y +I L
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFG---QMEKCGFPPDAIAYNTMIDGLA 271
Query: 218 KKEKVFDALGILNQM-----------------------------------KSDGIKPDIV 242
K +AL +L+ M + G +P+ V
Sbjct: 272 KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV 331
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
YT +++G +A LFDE++ G PDV T+ V I+GLCK N E K M
Sbjct: 332 IYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G KP+V+TY T++Q L K+ + ++K M G + TY ++DG G +
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Query: 363 IEACGLLEEALNKGLCTQS---SMFDETICGLCQRGLVRKALELL---KQMADKDVSPGA 416
EA LL+E L+K C+ S ++ + GLC G V K L+ L + A + + PG
Sbjct: 452 DEAAQLLDE-LDK--CSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGL 508
Query: 417 RVWEALLLSSVSKLDFVNTSFIRLVDQ 443
+ L +LD F R+V +
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSE 535
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 173/401 (43%), Gaps = 60/401 (14%)
Query: 76 CEPPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
C PP+A Y+ +I LA+ + VLD++ + T E + L+ + A +
Sbjct: 254 CGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPT-EVTYGILVNSLCKAGTLE 312
Query: 134 DSVNLFYKIPK--FRINRV-------GFA--------IEILNCMINDGFCVDGKTCSLIL 176
+ LF + FR N V GFA + + M+ G+ D T ++++
Sbjct: 313 RAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMI 372
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+C+ + ++ +EM + G +V YT +I+ L K +V +A I+ M + G
Sbjct: 373 DGLCKSGNF--EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
PD V Y +L+G +A +L DEL P++ Y+ +NGLC +VE +
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490
Query: 297 KMI-------------------------------AC-----MEELGSKPDVITYNTLLQA 320
+ AC M G KPD TYN L+
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550
Query: 321 LCKVRE--LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LC+ RE + R L+ +++ G + + TY+ + GL G++ A +LEEA ++G
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ GLC +G V +A+ L ++M + +P A +
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM K G + +IRS + + DA+ MK KPD+ + ++++ +
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKA 202
Query: 255 EDYVKAEELFDELLVLGLV------------------------------------PDVYT 278
KA E+F E++ +G V PD
Sbjct: 203 GMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I+GL K + + +K++ M P +TY L+ +LCK L R EL + M
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG----LCTQSSMFDETICGLCQR 394
G N Y+ +I G A G + EAC L +E + G + T + M D GLC+
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID----GLCKS 378
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
G +A + ++M P + ++ +SK+ V +F R++ ++ C
Sbjct: 379 GNFEQAAKSFEEMMRGGCKPNVVTYTT-IIQGLSKIGRVANAF-RIMKGMIAHGC 431
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I V A+++L + G+ D + + + +C Q + D + QEM + G
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV--DRAVSLFQEMVRQGGAPD 647
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I L+K +K+ DA ++M G KP + YT ++ + + +A F+
Sbjct: 648 AAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFE 707
Query: 266 ELLVLG-LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+L G LV V Y+ I+G CK V+A +K+ M G+ P +T +L L +
Sbjct: 708 SMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRS 767
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ + +EL++EM G + T++ ++DGL
Sbjct: 768 GKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 36/224 (16%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G + D+ Y ++N ++ +++Y + + +E+L G+ P+ +++N+ I + +
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 296 IKMIACMEELGSKPDVITYNTLLQALC--------------------------------- 322
+ M+ KPD+ T+ L+ LC
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 323 ---KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
K + + RE+ +M+ G + Y+ MIDGLA G EA +L+ L K
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + LC+ G + +A EL + MA P + ++ +L+
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +K + + + N M++ G++PD+ Y++++NG+ + A ELFD
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A ++ + + + +
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYT 350
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + P
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + +
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 114/227 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ +I M G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L E K+M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ TYS++I+GL + + +A L +E L+ GL
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 97/196 (49%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E +++ +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G + ++ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 150/325 (46%), Gaps = 19/325 (5%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLF--------------YKIPKFRINRVGFAIEILNC-- 159
E + +LI +A R +++ LF Y + + ++ G +E LN
Sbjct: 264 EVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323
Query: 160 -MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M G + T ++++ +C++ + DE + EM + G +V Y +I K
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKM--DEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ + DA IL+ M+S+ P+ Y ++ G+ + KA L +++L L P + T
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I+G CK N++E+ ++++ M E G PD TY+ + LCK + L +K
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KG+ N Y+ +IDG G I A LLE LN S ++ I GLC+ ++
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A L+ +M V P + L+
Sbjct: 562 EASSLVAKMLTMGVKPTVVTYTILI 586
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 17/276 (6%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N++ I N M+N G+C G L + ++ + G
Sbjct: 188 NQISPNIYTFNAMVN-GYCKIGNVVEAEL----------------YASKIVQAGLHPDTF 230
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT++I + + V +A + M G + + V YT +++G+ +A +LF ++
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
P V TY V I L + + M+E G +P+V TY L+ LCK ++
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKM 350
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ R+++ EM KG++ ++ TY+ +IDG +G I +A +L+ + + ++E
Sbjct: 351 DEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNEL 410
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
ICGLC++ V KA+ LL +M ++ +SP + +L+
Sbjct: 411 ICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ SL K + + + ++ ++ I P+I + ++NG + V+AE +++
Sbjct: 162 YNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV 221
Query: 269 VLGLVPDVYTY--------------NVY---------------------INGLCKQNNVE 293
GL PD +TY N Y I+GLC+ +
Sbjct: 222 QAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALC----KVRELNRLRELVKEMKWKGIVLNLQTY 349
+K+ A M E P V TY L+ AL KV LN L EMK KG N+ TY
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN----LFNEMKEKGCEPNVHTY 337
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+++IDGL + + EA +L E KGL ++ I G C+ G++ A E+L M
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Query: 410 KDVSPGARVWEALL 423
P R + L+
Sbjct: 398 NSCGPNTRTYNELI 411
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+ +LN M+ T + ++ C+ DL S L + M + G
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL--LSLMNENGLVPDQWT 476
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ I +L K+ +V +A + + +K+ G+K + V YT +++G A L + +L
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+P+ YTYNV I GLCK+ ++ ++A M +G KP V+TY L+ + K +
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ M G ++ TY+ + S+G + E ++ + +G+ + I
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + GL +A + LK M D P + L+
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 152/357 (42%), Gaps = 54/357 (15%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+FID T R +++ LF + + A E++ + DG+C GK
Sbjct: 479 VFID---TLCKEGRVEEAGTLFDSVKAKGVK----ANEVIYTALIDGYCKVGKI------ 525
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
D ++ M Y +I L K++K+ +A ++ +M + G+
Sbjct: 526 ----------DVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
KP +V YT+++ ++ + A ++F+ ++ LG PDV TY +++ Q +E
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDD 635
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+IA M E G PD++TY L+ ++ +R + +K M G +L SI+I L+
Sbjct: 636 VIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLS 695
Query: 358 SKGDIIE-----------------------------ACGLLEEALNKGLCTQSSMFDETI 388
+ + E A L E+ + G S++ I
Sbjct: 696 HENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALI 755
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
G CQ+ + +A L+ M ++ +SP ++ + LL KL V +RLVD ++
Sbjct: 756 AGFCQQERLEEAQGLVHHMKERGMSPSEDIYNS-LLDCCCKLG-VYAEAVRLVDAMV 810
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 128/301 (42%), Gaps = 31/301 (10%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ N M++ G+ D T + L + Q L +E+ + +M + G +V YT +
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML--EEVDDVIAKMNEEGILPDLVTYTVL 655
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL------------------------ 248
I + A L M G KP + ++++
Sbjct: 656 IDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNV 715
Query: 249 NGVIVQE-----DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
N V + + +Y A +LF++++ G DV Y I G C+Q +E ++ M+
Sbjct: 716 NSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMK 775
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G P YN+LL CK+ LV M G++ L++Y +++ GL +G
Sbjct: 776 ERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNE 835
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A + L+ G + I GL +R LV + EL+ M +KD + A + A L
Sbjct: 836 KAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAAL 895
Query: 424 L 424
+
Sbjct: 896 M 896
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 100/212 (47%), Gaps = 8/212 (3%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+++ M+ G +D +++ C+Q L +E G V MK+ G Y +
Sbjct: 731 IALKLFEKMVEHGCTIDVSIYGALIAGFCQQERL--EEAQGLVHHMKERGMSPSEDIYNS 788
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ K +A+ +++ M +G+ P + Y +++ G+ ++ KA+ +F LL G
Sbjct: 789 LLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG 848
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
D + V I+GL K++ V+ ++I MEE K + AL ++ N +
Sbjct: 849 YNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE---KDATAQADIACAALMRLAAANSTK 905
Query: 332 ELVKEMKWKGIVLN---LQTYSIMIDGLASKG 360
+++ + +G+ +N L S +++ L S G
Sbjct: 906 GALEDHELRGLSVNHGELTQLSGLVNNLISVG 937
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 172/369 (46%), Gaps = 23/369 (6%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
E Y +I+ L++ F + +++ + K + + E +FI +I+ Y A R + ++ F
Sbjct: 136 ETYLAMIEKLSKARAFEPMETLISQLHKSQ-IKCGENLFITVIRNYGFAGRPKLAIRTFL 194
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+IP F + ++ N ++N V K L+ L F KK
Sbjct: 195 RIPSFGLQP---SVRSFNTLLNT--LVQNKRFDLVH--------------LMFKNCRKKF 235
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G + ++++L KK + A+ +L +M + G P++V YT +L G + + D V A
Sbjct: 236 GIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGA 295
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+F E+L G VPD TY + ++G CK+ +K++ MEE +P+ +TY +++A
Sbjct: 296 RRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEA 355
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
CK ++ + L+ +M K + + +ID L +G + AC L ++ L K
Sbjct: 356 YCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPD 415
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
+++ I LC+ G V +A +L + +K P + AL+ + + RL
Sbjct: 416 NAITSTLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPEAA--RL 472
Query: 441 VDQILNTPC 449
D ++ C
Sbjct: 473 WDNMVEKGC 481
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
L+ Y RF D+V + ++ + R+ ND T +I+ + C+
Sbjct: 317 LMDGYCKKGRFMDAVKVMDEMEENRVEP------------ND------VTYGVIIEAYCK 358
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
++ S E+L + +M + + VI L ++ KV A + ++ PD
Sbjct: 359 EK--KSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDN 416
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
+ +++ + + +A +LFDE G +P TYN I G+C+ + ++
Sbjct: 417 AITSTLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPEAARLWDN 475
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
M E G P+ TYN L++ CKV +++EM G + N TY+I
Sbjct: 476 MVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 164/338 (48%), Gaps = 38/338 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS------------------ 187
++ V A + ++ ++ G D T + ++ C+++DL S
Sbjct: 230 KVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEV 289
Query: 188 ---------------DELLGFVQEMKKLGFCFGMV-DYTNVIRSLVKKEKVFDALGILNQ 231
DE + +MK C+ V YT +I++L E+ +AL ++ +
Sbjct: 290 AYTHLIHGLCVERRIDEAMDLFVKMKD-DDCYPTVRTYTVLIKALCGSERKSEALNLVKE 348
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M+ GIKP+I YT++++ + Q KA EL ++L GL+P+V TYN ING CK+
Sbjct: 349 MEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+E + ++ ME +P+ TYN L++ CK R +++ ++ +M + ++ ++ TY+
Sbjct: 409 IEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+IDG G+ A LL ++GL + I LC+ V +A +L + KD
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKD 527
Query: 412 VSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
V P ++ A L+ K VN + + +++++L+ C
Sbjct: 528 VIPNVVMYTA-LIDGYCKAGKVNEAHL-MLEKMLSKNC 563
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 169/353 (47%), Gaps = 24/353 (6%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKI------PKFRI-----------NRVGFAIEILN 158
E + LI R ++++LF K+ P R R A+ ++
Sbjct: 288 EVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVK 347
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
M G + T ++++ S+C Q L + ELLG +M + G ++ Y +I
Sbjct: 348 EMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLG---QMLEKGLMPNVITYNALINGYC 404
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K+ + DAL ++ M+S ++P+ Y ++ G + + KA + +++L ++PDV
Sbjct: 405 KRGMIEDALDVVELMESRNLRPNTRTYNELIKGY-CKRNVHKAMGVLNKMLERKVLPDVV 463
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYN I+G C+ N ++ ++++ M + G PD TY +++ +LCK + + +L +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ K ++ N+ Y+ +IDG G + EA +LE+ L+K S F+ I GLC G +
Sbjct: 524 EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKL 583
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
++A L ++M D+ P L+ + DF + R Q+L++ K
Sbjct: 584 KEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHA--YRRFQQMLSSGTK 634
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 7/251 (2%)
Query: 180 CEQRDLSSDELLGFVQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
C L+S G V EMK++ C + Y ++ K V +A ++ +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMI 244
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G+ PD YT ++ G ++D A ++F E+ + G + Y I+GLC + +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRI 304
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + + M++ P V TY L++ALC + LVKEM+ KGI N+ TY+++
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVL 364
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
ID L S+ + +A LL + L KGL ++ I G C+RG++ AL++++ M +++
Sbjct: 365 IDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNL 424
Query: 413 SPGARVWEALL 423
P R + L+
Sbjct: 425 RPNTRTYNELI 435
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 138/264 (52%), Gaps = 3/264 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ D C + T + +++ C+ ++ +E +V + + G YT++I ++
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKVGNV--EEANQYVSMIVEAGLDPDFFTYTSLIMGYCQR 266
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ + A + +M G + + V YT +++G+ V+ +A +LF ++ P V TY
Sbjct: 267 KDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTY 326
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
V I LC + ++ MEE G KP++ TY L+ +LC +L + REL+ +M
Sbjct: 327 TVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLE 386
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG++ N+ TY+ +I+G +G I +A ++E ++ L + ++E I G C+R V K
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHK 445
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A+ +L +M ++ V P + +L+
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLI 469
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 7/273 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M+ G + T + +++ C++ + ++ L V+ M+ Y +
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMI--EDALDVVELMESRNLRPNTRTYNEL 434
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ K+ V A+G+LN+M + PD+V Y +++G ++ A L + GL
Sbjct: 435 IKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPD +TY I+ LCK VE + +E+ P+V+ Y L+ CK ++N
Sbjct: 494 VPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHL 553
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC--G 390
++++M K + N T++ +I GL + G + EA LLEE + K + Q ++ +TI
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEAT-LLEEKMVK-IDLQPTVSTDTILIHR 611
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + G A +QM P A + +
Sbjct: 612 LLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%)
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
I CY +LN + + ++++ E+L + P++YTYN +NG CK NVE + ++
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ E G PD TY +L+ C+ ++L+ ++ KEM KG N Y+ +I GL +
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
I EA L + + + I LC +AL L+K+M +K + P +
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362
Query: 421 ALLLSSVSK 429
L+ S S+
Sbjct: 363 VLIDSLCSQ 371
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 129/326 (39%), Gaps = 55/326 (16%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ +LN M+ D T + ++ C R + D + M G YT++
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQC--RSGNFDSAYRLLSLMNDRGLVPDPWTYTSM 503
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K ++V +A + + ++ + P++V YT +++G +A + +++L
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNC 563
Query: 273 VPDVYTYNVYINGLC-----------------------------------KQNNVEAGIK 297
+P+ T+N I+GLC K + + +
Sbjct: 564 LPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYR 623
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M G+KPD TY T +Q C+ L ++V +MK G+ +L TYS +I G
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYG 683
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMF------------------DETICGLCQRGLVRK 399
G A +L+ + G F + +C +
Sbjct: 684 DLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDI 743
Query: 400 ALELLKQMADKDVSPGARVWEALLLS 425
+ELL++M + V+P A+ +E L+L
Sbjct: 744 VVELLEKMVEHGVTPNAKSYEKLMLG 769
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 120/256 (46%), Gaps = 21/256 (8%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +I L K+ +A + +M ++P + T++++ ++ D+ A F ++L
Sbjct: 570 FNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQML 629
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD +TY +I C++ ++ M+A M+E G PD+ TY++L++ + N
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTN 689
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLAS------KGDIIEAC------------GLLE 370
++K M G + T+ +I L KG C LLE
Sbjct: 690 SAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLE 749
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD-VSPGARVWEALLLSSVSK 429
+ + G+ + +++ + G+C+ G +R A ++ M K+ +SP V+ A LLS K
Sbjct: 750 KMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNA-LLSCCCK 808
Query: 430 LDFVNTSFIRLVDQIL 445
L+ N + ++VD ++
Sbjct: 809 LEKHNEA-AKVVDDMI 823
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 120/283 (42%), Gaps = 21/283 (7%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D T + + + C + L E V +MK+ G + Y+++I+
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLQDAE--DMVAKMKENGVSPDLFTYSSLIKGYGDL 685
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLN---------------GVIVQEDYVKAE--- 261
+ A +L +M G +P + ++ GV V + ++ +
Sbjct: 686 GRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVV 745
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL-GSKPDVITYNTLLQA 320
EL ++++ G+ P+ +Y + G+C+ N+ K+ M++ G P + +N LL
Sbjct: 746 ELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSC 805
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
CK+ + N ++V +M G + L++ I+I L KG+ + + L G
Sbjct: 806 CCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDD 865
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G+ ++GLV EL M + ++ + L+
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +L EKVFD + + +GI P + + +L+ E + +A ++ D+++ +G
Sbjct: 773 IGNLRVAEKVFDHM-----QQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGH 827
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P + + + I L K+ E G + + + G D + + ++ + K + E
Sbjct: 828 LPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYE 887
Query: 333 LVKEMKWKGIVLNLQTYSIMIDG 355
L M+ G + QTYS++I+G
Sbjct: 888 LFNVMEKNGCTFSSQTYSLLIEG 910
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 11/213 (5%)
Query: 113 ETPEFIFIDLIK-----TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCV 167
E + F+ LIK Y + V + + +F I +E+L M+ G
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDI-----VVELLEKMVEHGVTP 758
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ K+ ++ +CE +L E + F +K G + + ++ K EK +A
Sbjct: 759 NAKSYEKLMLGICEIGNLRVAEKV-FDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAK 817
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+++ M G P + +++ + + + + +F LL G D + + I+G+
Sbjct: 818 VVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVG 877
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
KQ VEA ++ ME+ G TY+ L++
Sbjct: 878 KQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 148/310 (47%), Gaps = 19/310 (6%)
Query: 131 RFQDSVNLFYKIPKFR-----------------INRVGFAIEILNCMINDGFCVDGKTCS 173
+ D+VNLF + K R +N+ I + M N G + T S
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++++ C + LS L + +M KLG+ +V +++ ++ DA+ ++ QM
Sbjct: 121 ILINCFCRRSQLSL--ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G +PD + +++G+ +A L D ++V G PD+ TY + +NGLCK+ +++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ ++ ME+ +P V+ YNT++ ALC + +N L EM KGI N+ TY+ +I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L + G +A LL + + + + F I + G + +A +L +M + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 414 PGARVWEALL 423
P + +L+
Sbjct: 359 PDIFTYSSLI 368
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 174/394 (44%), Gaps = 55/394 (13%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I SQ +VL + K +E L+ + +R D+V+L +
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 142 IPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + FR NR A+ +++ M+ G D T ++++ +C++ D
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ D L +++M++ G+V Y +I +L + V DAL + +M + GI+P++V Y
Sbjct: 237 I--DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 245 -----------------------------------TMVLNGVIVQEDYVKAEELFDELLV 269
+ +++ + + V+AE+L+DE++
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD++TY+ ING C + ++ M M P+V+TYNTL++ CK + ++
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL +EM +G+V N TY+ +I G + A + ++ ++ G+ + +
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC G V AL + + + + P + ++
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 32/318 (10%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y+ +I+ L ++ D S +L D IE++ N P + F LI + + +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN---PNVVTFSALIDAFVKEGKLVE 344
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCS 173
+ L+ ++ K I+ F L IN GFC+ + T +
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSL---IN-GFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ C+ + + DE + +EM + G V YT +I + + +A + QM
Sbjct: 401 TLIKGFCKAKRV--DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
SDG+ PDI+ Y+++L+G+ A +F+ L + PD+YTYN+ I G+CK VE
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G + + G KP+V+TY T++ C+ L +EMK +G + + TY+ +I
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 354 DGLASKGDIIEACGLLEE 371
GD + L+ E
Sbjct: 579 RAHLRDGDKAASAELIRE 596
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%)
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
S+ DL D+ + +M K +V+++ ++ ++ K K + + QM++ GI
Sbjct: 53 SINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 112
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
++ Y++++N + A + +++ LG PD+ T N +NG C N + +
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M E+G +PD T+NTL+ L + + LV M KG +L TY I+++GL
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+GDI A LL++ + +++ I LC V AL L +M +K + P
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 418 VWEALL 423
+ +L+
Sbjct: 293 TYNSLI 298
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
DY + + + K+ DA+ + M P IV ++ +L+ + + L +++
Sbjct: 48 DYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 107
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
LG+ ++YTY++ IN C+++ + + ++A M +LG +PD++T N+LL C +
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ LV +M G + T++ +I GL EA L++ + KG +
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+RG + AL LLK+M + PG ++ ++
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDG 164
LIK + A R + + LF ++ + F+ A + M++DG
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D T S++L +C + + L + +++ + Y +I + K KV D
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVET--ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ + G+KP++V YT +++G + +A+ LF E+ G +PD TYN I
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 285 GLCKQNNVEAGIKMIACMEE 304
+ + A ++I M
Sbjct: 580 AHLRDGDKAASAELIREMRS 599
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A ELFDE+LV
Sbjct: 182 TLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL+P+ T+ I+G CK V+ +++ M PD+ITYNTL+ L K +L +
Sbjct: 242 GLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY +IDG +GD+ A + + + + + I G
Sbjct: 302 HDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P R + ++
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDDRTYTMII 394
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 107/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 172
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + ++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 232
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KG++ N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 233 ELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGL 292
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++G +++A +L+ +M+ K + P + L+
Sbjct: 293 XKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLI 324
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 189 RLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLIPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 247 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 307 EMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 367 RSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 160/344 (46%), Gaps = 21/344 (6%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
P A+ +I L NS+F L + R N + + L+ + D+V L+
Sbjct: 421 PGAFTTIIHWLCMNSRFESALRFLREMLLR-NMRPNDGLLTTLVGGLCKEGKHSDAVELW 479
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
++ ++ GF + T + ++ +C+ ++ E + +++M +
Sbjct: 480 FR------------------LLEKGFGANLVTTNALIHGLCKTGNM--QEAVRLLKKMLE 519
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
GF + Y +I K+ KV + + +M GI+PD Y ++++G+ +
Sbjct: 520 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 579
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A L++E LVP+VYTY V I+G CK + +E G K+ + + + + YNTL++
Sbjct: 580 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIR 639
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
A C+ +L +M+ KGI TYS +I G+ + G + +A L++E +GL
Sbjct: 640 AYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLP 699
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G C+ G + K + +L++M+ D+ P + ++
Sbjct: 700 NVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMI 743
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 26/362 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTY------ADAHRFQ- 133
Y +I L + +F + +SVL + +EK F E ++ LI Y DA R +
Sbjct: 318 TYSVLINGLMKLEKFNEANSVLKETLEK--GFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375
Query: 134 ---------DSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+SV L I F +I ++ A IL M++ GF ++ + I+ +C
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 435
Query: 184 DLSSDELLGFVQEM--KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
S L F++EM + + G++ T ++ L K+ K DA+ + ++ G ++
Sbjct: 436 RFES--ALRFLREMLLRNMRPNDGLL--TTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 491
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V +++G+ + +A L ++L G V D TYN I+G CK+ VE G K+
Sbjct: 492 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 551
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M + G +PD TYN L+ +C++ +L+ L E K + +V N+ TY +MIDG
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
I E L E L + L S +++ I C+ G +A +L M K + P + +
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671
Query: 422 LL 423
L+
Sbjct: 672 LI 673
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 153/352 (43%), Gaps = 40/352 (11%)
Query: 112 FETPEFIFIDLIKTYADAHRFQDS------VNLFYKIPKFRINRVGF--AIEILNCMIND 163
F P+ I++ AD + +S V+L + + VGF AI + + N
Sbjct: 147 FGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANK 206
Query: 164 GFCVDGKTCSLILSSVCEQRDL--------------SSDELL-----------GFVQE-- 196
G KTC+ +LSS+ + +L S D L G V++
Sbjct: 207 GVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAI 266
Query: 197 -----MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
M+KLG +V Y N+I L K + +A +M DG+ ++ Y++++NG+
Sbjct: 267 QLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGL 326
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ E + +A + E L G P+ YN I+G CK N+ +++ M G P+
Sbjct: 327 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 386
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+T N+++Q CK+ ++ + +++EM +G +N ++ +I L A L E
Sbjct: 387 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 446
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + + + + GLC+ G A+EL ++ +K AL+
Sbjct: 447 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 498
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 147/360 (40%), Gaps = 57/360 (15%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVD 168
R+ ++F I + + +D++ LF F + ++G + ++
Sbjct: 239 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLF-----FDMEKLGVSPNVV----------- 282
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + ++ +C+ +L DE F ++M K G ++ Y+ +I L+K EK +A +
Sbjct: 283 --TYNNLIHGLCKHGNL--DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 338
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L + G P+ V Y +++G + A + +++ G+ P+ T N I G CK
Sbjct: 339 LKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCK 398
Query: 289 -----------------------------------QNNVEAGIKMIACMEELGSKPDVIT 313
+ E+ ++ + M +P+
Sbjct: 399 IGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGL 458
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
TL+ LCK + + EL + KG NL T + +I GL G++ EA LL++ L
Sbjct: 459 LTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML 518
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+G ++ I G C+ G V + +L +M + + P + L+ + + KLD
Sbjct: 519 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLD 578
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + M + G T S ++ +C + + L + EM+K G +V YT +
Sbjct: 650 AFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCL--IDEMRKEGLLPNVVCYTAL 707
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K ++ + +L +M S I P+ + YT++++G D A +L E++ G+
Sbjct: 708 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 767
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
VPD TYNV NG CK+ +E G K+ M + G D ITY TL+
Sbjct: 768 VPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y +IR+ + +A + + M+S GI P Y+ +++G+ A+ L DE
Sbjct: 632 VVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDE 691
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ GL+P+V Y I G CK ++ + ++ M P+ ITY ++ K +
Sbjct: 692 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 751
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ +L+ EM KGIV + TY+++ +G +G I E + + +GL
Sbjct: 752 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 85/173 (49%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
R+ ++ E +M+ G Y+++I + ++ DA ++++M+ +G+ P++V
Sbjct: 643 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVV 702
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
CYT ++ G K + E+ + P+ TY V I+G K +++ K++ M
Sbjct: 703 CYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 762
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
G PD +TYN L CK ++ ++ M +G+ L+ TY+ ++ G
Sbjct: 763 VGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
>gi|218186280|gb|EEC68707.1| hypothetical protein OsI_37189 [Oryza sativa Indica Group]
Length = 474
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 135/257 (52%), Gaps = 8/257 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +R A ++L CM + D +C +LSS+C+ S+ + + F+ +M G
Sbjct: 218 QAHRPAAAADLLCCMPSLLLDPDLASCRAVLSSLCQYA--SAQDAVAFLDKMCHWGISPS 275
Query: 206 MVDYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
DY V +L+++ KV +A ++ N+M S+ + P + + + + ++ EE+F
Sbjct: 276 RSDYHAVFDALLQEGKVAEAYEVMKNKMGSNRVAPALAYFKLTMQAFSECLEFDSVEEVF 335
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L+ GLVPDV Y+VYI+ LC++ ++ +M+ CME G PDV T+ ++
Sbjct: 336 DEMLLRGLVPDVDVYSVYISALCRKGDLAGARQMMTCMEHAGCPPDVRTFGVVVAGCMSA 395
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD-IIEACGLLEEALNKGLCTQSSM 383
++ +RELV+E +G+ + S +I GL GD ++ LL E L + +
Sbjct: 396 GDMGTVRELVQEAIRRGLQWDPPALSELI-GLLQAGDGATQSQELLLEPL---FVHDAPV 451
Query: 384 FDETICGLCQRGLVRKA 400
+ I LC++GL+ A
Sbjct: 452 LGQLIGALCKQGLLGPA 468
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 13/238 (5%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN---VIRSLVKKEKVFDALGILNQ 231
+L+++C SS L F ++ L D T +I +L + + A +L
Sbjct: 177 LLAAIC-----SSPAFLRFAPKVLLLAAPSVSPDATTFHILISTLCQAHRPAAAADLLCC 231
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M S + PD+ VL+ + A D++ G+ P Y+ + L ++
Sbjct: 232 MPSLLLDPDLASCRAVLSSLCQYASAQDAVAFLDKMCHWGISPSRSDYHAVFDALLQEGK 291
Query: 292 VEAGIKMIACMEELGSK---PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
V +++ ++GS P + + +QA + E + + E+ EM +G+V ++
Sbjct: 292 VAEAYEVM--KNKMGSNRVAPALAYFKLTMQAFSECLEFDSVEEVFDEMLLRGLVPDVDV 349
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
YS+ I L KGD+ A ++ + G F + G G + EL+++
Sbjct: 350 YSVYISALCRKGDLAGARQMMTCMEHAGCPPDVRTFGVVVAGCMSAGDMGTVRELVQE 407
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 36/195 (18%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PD T+++ I+ LC+ + A ++ CM L PD+ + +L +LC+
Sbjct: 204 PDATTFHILISTLCQAHRPAAAADLLCCMPSLLLDPDLASCRAVLSSLCQYASAQDAVAF 263
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL------------------------ 369
+ +M GI + Y + D L +G + EA ++
Sbjct: 264 LDKMCHWGISPSRSDYHAVFDALLQEGKVAEAYEVMKNKMGSNRVAPALAYFKLTMQAFS 323
Query: 370 ------------EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+E L +GL ++ I LC++G + A +++ M P R
Sbjct: 324 ECLEFDSVEEVFDEMLLRGLVPDVDVYSVYISALCRKGDLAGARQMMTCMEHAGCPPDVR 383
Query: 418 VWEALLLSSVSKLDF 432
+ ++ +S D
Sbjct: 384 TFGVVVAGCMSAGDM 398
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +K + + + N M++ G++PD+ Y++++NG+ + A ELFD
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + P
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + +
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ +I M G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ TYS++I+GL + + +A L +E L+ GL
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G + ++ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 132/256 (51%), Gaps = 2/256 (0%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+++L M D T S I+ S+C RD D + +EM+ G +V Y +
Sbjct: 188 LALDLLRKMDERNVKADVFTYSTIIDSLC--RDGCIDAAISLFKEMETKGIKSSLVTYNS 245
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ L K K D + +L M S I P+++ + ++++ + + +A EL+ E++ G
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG 305
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ TYN ++G C QN + M+ M PD++T+ +L++ CKV+ ++
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L +++ +G+V N TYSI++ G G + A L +E ++ G+ + + GL
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGL 425
Query: 392 CQRGLVRKALELLKQM 407
C G + KALE+ + +
Sbjct: 426 CDNGKLEKALEIFEDL 441
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 17/280 (6%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
K +N + I LN MIN FC KTC + +LG V KLG+
Sbjct: 90 KMELNGIAHNIYTLNIMIN-CFCRCCKTCF-------------AYSVLGKVM---KLGYE 132
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ +I L + KV +A+ ++ +M +G +P++V Y ++NG+ D A +L
Sbjct: 133 PDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDL 192
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++ + DV+TY+ I+ LC+ ++A I + ME G K ++TYN+L+ LCK
Sbjct: 193 LRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCK 252
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ N +L+K+M + I+ N+ T++++ID +G + EA L +E + KG+ +
Sbjct: 253 AGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTIT 312
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + G C + + +A +L M + SP + +L+
Sbjct: 313 YNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLI 352
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 120/240 (50%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D+ D+ + QEM + +VD++ + ++ L +M+ +GI +I
Sbjct: 43 DIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT 102
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+++N A + +++ LG PD T+N INGLC ++ V + ++A M
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G +P+V+TYN+++ +CK + + +L+++M + + ++ TYS +ID L G I
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A L +E KG+ + ++ + GLC+ G ++LLK M + + P + L+
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 118/234 (50%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+L F ++M+ G + +I + K A +L ++ G +PD + ++N
Sbjct: 84 VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 143
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ ++ +A L ++ G P+V TYN +NG+CK + + ++ M+E K
Sbjct: 144 GLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA 203
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DV TY+T++ +LC+ ++ L KEM+ KGI +L TY+ ++ GL G + LL
Sbjct: 204 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLL 263
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ ++ + F+ I + G +++A EL K+M K +SP + +L+
Sbjct: 264 KDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLM 317
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 25/283 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y+ ++ ++ + +++LD + R N F LIK Y R + +
Sbjct: 308 PNTITYNSLMDGYCMQNRLSEANNMLD-LMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMK 366
Query: 138 LFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
LF KI K + N V ++I + GFC GK + E+ Q
Sbjct: 367 LFRKISKRGLVANTVTYSILV------QGFCQSGKL------EIAEE----------LFQ 404
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM LG ++ Y ++ L K+ AL I ++ + DIV YT+++ G+
Sbjct: 405 EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGG 464
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A LF L G+ P+V TY V I+GLCK+ ++ ++ MEE G++P+ TYN
Sbjct: 465 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYN 524
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
TL++A + +L +L++EMK G + + ++ID L+S
Sbjct: 525 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSS 567
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 128/278 (46%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + FA +L ++ G+ D T + +++ +C + +S E + V M + G
Sbjct: 112 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVS--EAVVLVARMVENGCQPN 169
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +++ + K AL +L +M +K D+ Y+ +++ + A LF
Sbjct: 170 VVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 229
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G+ + TYN + GLCK G++++ M P+VIT+N L+ K
Sbjct: 230 EMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEG 289
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L EL KEM KGI N TY+ ++DG + + EA +L+ + F
Sbjct: 290 KLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFT 349
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ V + ++L ++++ + + + L+
Sbjct: 350 SLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 116/235 (49%), Gaps = 2/235 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A +L+ M+ + D T + ++ C+ + + DE + +++ K G V
Sbjct: 324 NRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRV--DEGMKLFRKISKRGLVANTV 381
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +++ + K+ A + +M S G+ PD++ Y ++L+G+ KA E+F++L
Sbjct: 382 TYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 441
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ D+ Y + I G+CK VE + + G KP+V+TY ++ LCK L
Sbjct: 442 QKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 501
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ L+++M+ G N TY+ +I GD+ + L+EE + G +S
Sbjct: 502 SEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 556
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G G V Y +RS + K DA+ + +M P +V ++ +GV + +
Sbjct: 25 GISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLV 84
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ ++ + G+ ++YT N+ IN C+ ++ + +LG +PD T+NTL+
Sbjct: 85 LDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLING 144
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LC +++ LV M G N+ TY+ +++G+ GD A LL + + +
Sbjct: 145 LCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKAD 204
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I LC+ G + A+ L K+M K + + +L+
Sbjct: 205 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLV 247
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 144/344 (41%), Gaps = 21/344 (6%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
P +++ LA++++ D V DH+ R DAH L
Sbjct: 108 PHVPSWLVLVLAQSARPHDAVRVFDHMRAR--------------GLAPDAH---ACTALL 150
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
+ + R+ A + + M G + +L + D + E V M
Sbjct: 151 TALARARMT--ATARRVFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAE--AIVTRMDA 206
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G Y VI +K ++A+ ++M +GI+PD V + ++G+ + +
Sbjct: 207 AGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKE 266
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +LF E++ PD TY I+G C+ NVE +K+ ME G P V TYN +L+
Sbjct: 267 AAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILR 326
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LC+ + + L+ EM + + + T + +I+ +GD+ AC + ++ + GL
Sbjct: 327 KLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQL 386
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G C+ + A E QM D SP V+ L+
Sbjct: 387 NHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLV 430
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 9/252 (3%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I + V +A+ + +M++ G+ P + Y +L + + + L E
Sbjct: 284 VTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHE 343
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + D T N IN CK+ ++ + K+ M E G + + TY L+ CK RE
Sbjct: 344 MDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARE 403
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L+ +E +M G N +S ++DG K + + +E + +GL +++
Sbjct: 404 LDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRS 463
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK---------LDFVNTSF 437
I LC++GLV +A + QM K + + V+ L + ++K LD + +
Sbjct: 464 LIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQ 523
Query: 438 IRLVDQILNTPC 449
+ + QI N C
Sbjct: 524 LYITPQIYNCLC 535
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 127/298 (42%), Gaps = 2/298 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A ++ M+ D T + ++ C ++ +E + M+ G G+
Sbjct: 262 GRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNV--EEAVKLRGRMEAAGMLPGVA 319
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++R L + + + +L++M ++ D V ++N + D A ++ ++
Sbjct: 320 TYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKM 379
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ GL + +TY I+G CK ++ + M + G P+ ++ L+ CK
Sbjct: 380 MESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNA 439
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + + E+ +G+ + Y +I L KG + +A + ++ +KGL S ++
Sbjct: 440 DAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATL 499
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+G AL L M + +++ L S + + +N ++R +++ L
Sbjct: 500 AYTYLTKGNPTAALNTLDGMTKNQLYITPQIYNCLCTSYADEKETLNMLWVRAIERGL 557
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 6/264 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V Y
Sbjct: 109 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSYN 162
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A LFDE+LV
Sbjct: 163 TLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVK 222
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 223 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 282
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 283 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISG 342
Query: 391 LCQRGLVRKALELLKQMADKDVSP 414
LCQ G A ++L++M + P
Sbjct: 343 LCQEGRSVDAEKMLREMLSVGLKP 366
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 112/215 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ A G+ ++M G+ P+ V +T +++G A E++ ++L
Sbjct: 196 YSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 255
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L+PD+ TYN I GLCK+ +++ +I M G KPD TY TL+ CK +L+
Sbjct: 256 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 315
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E L+ GL + + +
Sbjct: 316 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIV 375
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G V K +LLK+M +P + L+
Sbjct: 376 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 410
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 115/226 (50%), Gaps = 1/226 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ D A+ +FD + G
Sbjct: 94 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWG 153
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V +YN +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 154 LRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGAN 213
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L EM KG+V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 214 GLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 273
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
C++G +++A +L+ +M+ K + P + L+ + D ++T+F
Sbjct: 274 CKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGD-LDTAF 318
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D G EM G
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DGANGLFDEMLVKGLVPN 227
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 228 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 287
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD +TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 288 EMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 347
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++++ KGD+ + LL+E G
Sbjct: 348 RSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDG 398
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 154/338 (45%), Gaps = 40/338 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ L +I GF VD + +L +C + +SD + ++ M +LG +
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR-TSDAMDIVLRRMTQLGCIPNVF 163
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +++ L + + +AL +L M DG PD+V YT V+NG + D KA +
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM----------------------- 302
E+L G++P+V TYN I LCK ++ ++++ M
Sbjct: 224 EMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 303 ------------EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
G +PDV+TYN+L+ LCK R++ M +G+ + TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ G A+KG ++E GLL+ + G+ +F IC ++G V +A+ + +M +
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403
Query: 411 DVSPGARVWEAL--LLSSVSKLDFVNTSFIRLVDQILN 446
++P + + +L +++ F +++D+ L+
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 167/375 (44%), Gaps = 24/375 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S + +P Y +++ A ++ +LD + R ++F LI Y
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD-LMVRNGIHPNHYVFSILICAY 384
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
A + ++ +F K+ + +N RV A+ MI++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 170 KTCSLILSSVC--EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ ++ S+C ++ D + + +L EM G C + + ++I S K+ +V ++
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELIL----EMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ + M G+KP+I+ Y+ +++G + +A +L ++ +G+ PD TYN ING C
Sbjct: 501 LFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + +E + + ME G PD+ITYN +LQ L + R +EL + G L L
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I++ GL EA + + L ++ F+ I L + G +A +L +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680
Query: 408 ADKDVSPGARVWEAL 422
+ + P R + +
Sbjct: 681 SANGLVPDVRTYSLM 695
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 4/280 (1%)
Query: 148 NRVGFAIEILNCMINDGF-CV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
NR A+E+L M +DG C D + + +++ ++ DL D+ G EM G
Sbjct: 176 NRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPN 233
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++I +L K + + A+ +L M +G+ P+ Y +++G +A
Sbjct: 234 VVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ PDV TYN ++ LCK KM M + G KP++ TY TLLQ
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + L+ M GI N +SI+I A +G + +A + + +GL + +
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I LC+ G V A+ +QM D+ +SPG V+ +L+ S
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 176/415 (42%), Gaps = 46/415 (11%)
Query: 2 VRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQP 61
+ + +A L K R+ L+P + + V+ ++ +++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
+ +SL+HS I+ + +A +++ L D LD I F
Sbjct: 445 IVYNSLIHSLCIF--DKWDKAKELILEML-------DRGICLDTI-----------FFNS 484
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILN-CMINDGFCVDGKTCSLILSSVC 180
+I ++ R +S LF + R+G I+ + DG+C+ GK
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMV-----RIGVKPNIITYSTLIDGYCLAGKM--------- 530
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
DE + M +G V Y +I K ++ DAL + +M+S G+ PD
Sbjct: 531 -------DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
I+ Y ++L G+ A+EL+ + G ++ TYN+ ++GLCK N + ++M
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQ 643
Query: 301 --CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
C+ +L + + T+N ++ AL KV + ++L + G+V +++TYS+M + L
Sbjct: 644 NLCLTDL--QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+G + E L G S M + + L QRG + +A L + +K S
Sbjct: 702 QGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L M+ +G + +T + I+ C E +GF+++M G +V Y ++
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG--QPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A + + M G+KP+I Y +L G + V+ L D ++ G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY------------------ 314
P+ Y +++ I KQ V+ + + + M + G PD +TY
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 315 -----------------NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
N+L+ +LC + ++ +EL+ EM +GI L+ ++ +ID
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+G +IE+ L + + G+ + I G C G + +A +LL M + P
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 418 VWEALL 423
+ L+
Sbjct: 551 TYNTLI 556
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E++ M++ G C+D + I+ S C E R + S++L M ++G ++ Y+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL---MVRIGVKPNIITYST 519
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K+ +A +L M S G+KPD V Y ++NG A LF E+ G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD+ TYN+ + GL + A ++ + E G++ ++ TYN +L LCK +
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + + + L +T++IMI L G EA L GL + L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
++GL+ + +L M + + +R+ +++ + + D +++ ++D+
Sbjct: 700 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCF 204
+I+R+ A+ + M + G D T ++IL + + +R ++ EL + E G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES---GTQL 617
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++ L K +AL + + ++ + + +++ ++ +A++LF
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L GLVPDV TY++ L +Q +E + MEE G + N++++ L +
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
++ R + + K L T S+ +D L+
Sbjct: 738 GDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 159/344 (46%), Gaps = 21/344 (6%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
++ +I+ A + +F I VLD + KRE E IFI + K AH ++VN F++
Sbjct: 91 TFYRLIENYATSREFHFIHQVLDRM-KREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 149
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDG-KTCSLILSSVCEQRDLS-SDELLGFVQEMKK 199
M ND C K+ + +L+ + ++ D S + + V
Sbjct: 150 ------------------MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANS 191
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
GF ++ Y +I++L K ++ A+ +M PD+ Y+ ++NG+ + +
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A L DE+ G +P+ T+NV I+ L K ++ K++ M G P+ +TYNTL+
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 311
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LC +L++ L+++M V N TY +I+GL + + +L +G
Sbjct: 312 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 371
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GL + G A+ L K+MA+K P V+ A +
Sbjct: 372 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFI 415
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 168/383 (43%), Gaps = 37/383 (9%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF--IFIDLIKTYADAHRF 132
NC P Y ++ L + + + +LD ++ P + ID + D R
Sbjct: 228 NCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRA 287
Query: 133 QDSV-NLFYK--IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE 189
V N+F K +P N V + N +I+ G C+ GK D+
Sbjct: 288 AKLVDNMFLKGCVP----NEVTY-----NTLIH-GLCLKGKL----------------DK 321
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
L +++M V Y +I LVK+ + D + IL M+ G K + Y+ +++
Sbjct: 322 ALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 381
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ + A L+ E+ G P+V Y +I+GLC+ + ++ M G P
Sbjct: 382 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP 441
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
+ TY++L++ K + + + KEM + + N+ S++++GL G + EA +
Sbjct: 442 NAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 501
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR---VWEALLLSS 426
L +GL + I GLC G V K L+L +M ++ P +R V +L ++
Sbjct: 502 THMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE--PKSRPDVVTYNILFNA 559
Query: 427 VSKLDFVNTSFIRLVDQILNTPC 449
+ + D + T I L++ +L+ C
Sbjct: 560 LCRQDNL-TRAIDLLNSMLDEGC 581
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 22/275 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C P Y +I L + + D +L +E+R + E+I+ LI
Sbjct: 324 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ-KANEYIYSSLISG 382
Query: 126 YADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVD 168
+ +++V L+ ++ + R + A +IL M++ GF +
Sbjct: 383 LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPN 442
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S ++ ++ D S + + +EM +V + ++ L + ++ +AL +
Sbjct: 443 AFTYSSLMKGFFKKGD--SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTV 500
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL--GLVPDVYTYNVYINGL 286
M +G+KPD+V Y+ ++ G+ K +LF E+ PDV TYN+ N L
Sbjct: 501 WTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNAL 560
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
C+Q+N+ I ++ M + G PD +T N L+ L
Sbjct: 561 CRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +K + + + N M++ G++PD+ Y++++NG+ + A ELFD
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + P
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + +
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ +I M G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMP 414
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ TYS++I+GL + + +A L +E L+ GL
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 116/227 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y I++ VK V L + N+MK D I P + Y ++++G+ + AE+LFDE+L
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L+P + TYN I+G CK N E K+ M+ +P +IT+NTLL+ L K +
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++KEMK G V + T+SI+ DG +S A G+ E A++ G+ + +
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
LC+ G + KA E+L + K + P ++ ++ K D V
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 146/272 (53%), Gaps = 4/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A+ + ++ G ++ TCS++L+++C++ + ++E+LG +EM K G V Y
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG--REMAK-GLVPNEVIYNT 394
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I +K + A + M+ G+KPD + Y ++ + AE+ +++ + G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P V TYN+ I G ++ + ++ ME+ G+ P+V++Y TL+ LCK +L +
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ ++M+ +G+ ++ Y+++IDG SKG I +A +E L KG+ ++ I GL
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + +A +LL +++ K + P + +L+
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++EMK LGF ++ + EK ALG+ G+K + +++LN +
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ KAEE+ + GLVP+ YN I+G C++ ++ I ME+ G KPD +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN L++ C++ E+ + V +MK KG+ +++TY+I+I G K + + +L+E
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ G + I LC+ + +A + + M D+ VSP R++ L+ SK
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 179/416 (43%), Gaps = 43/416 (10%)
Query: 53 QQQQIPKQPHILSSLLHS-----------FSIYNCEPPPEAYHF---VIKTLAENSQFCD 98
QQ +I +LSSLL S FS ++ P + F ++ L S+
Sbjct: 67 QQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMIS 126
Query: 99 --------------------ISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNL 138
++ +LDH+ K + F +F++++++ F+ S +
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES-----DFRPSKFM 181
Query: 139 FYKI--PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+ K +++ VG +E+ N M +D ++++ +C+ + ++ E L E
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL--FDE 239
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M ++ Y +I K + + +MK+D I+P ++ + +L G+
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
AE + E+ LG VPD +T+++ +G EA + + + G K + T +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL ALCK ++ + E++ KG+V N Y+ MIDG KGD++ A +E +G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ ++ I C+ G + A + + +M K VSP + L+ K +F
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 31/319 (9%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSV 136
P E Y+ +I +F +L +E +N P + + LI + ++
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEME--DNGTMPNVVSYGTLINCLCKGSKLLEA- 513
Query: 137 NLFYKIPKFRINRVGFA--IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+I K + G + + I N +I DG C GK ++ F
Sbjct: 514 ----QIVKRDMEDRGVSPKVRIYNMLI-DGCCSKGKI----------------EDAFRFS 552
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM K G +V Y +I L K+ +A +L ++ G+KPD+ Y +++G
Sbjct: 553 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ + L++E+ G+ P + TY++ I+ LC + +E ++ E+ KPD++ Y
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFG---EMSLKPDLLVY 668
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N +L ++ + L K+M K I L+ TY+ +I G G + E L++E
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNA 728
Query: 375 KGLCTQSSMFDETICGLCQ 393
+ + ++ ++ + G C+
Sbjct: 729 REMEPEADTYNIIVKGHCE 747
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 31/265 (11%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
V +MK G + Y +I +K + IL +M+ +G P++V Y ++N +
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
++A+ + ++ G+ P V YN+ I+G C + +E + M + G + +++T
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNTL+ L +L+ +L+ E+ KG+ ++ TY+ +I G G++ L EE
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 374 NKG-------------LCTQSSM-FDETICG-----------------LCQRGLVRKALE 402
G LCT+ + E + G G + KA
Sbjct: 627 RSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 403 LLKQMADKDVSPGARVWEALLLSSV 427
L KQM +K + + +L+L +
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQL 711
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ +EMK+ G + Y +++ SL KE + + +M +KPD++ Y VL+
Sbjct: 619 IALYEEMKRSGIKPTLKTY-HLLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHC 674
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
V D KA L +++ + D TYN I G K + +I M +P+
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
TYN +++ C+V++ +EM+ KG +L++ + ++ GL
Sbjct: 735 ADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 181/426 (42%), Gaps = 59/426 (13%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE-NFETPEFIFIDLIKTYADAHRFQ 133
C P P YH +++ F VL+ + R + + + D
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLV--LNAICDQGSVD 209
Query: 134 DSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+++L +P F R G E++ M+ + T + ++
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
S +C R+ + + + +M + G + Y +I + K+ + A ILN+M S G
Sbjct: 270 SYLC--RNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYG 327
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDE------------------------------ 266
+KP++VCY +L G+ E + + EEL E
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387
Query: 267 -----LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+LV G +PDV TY ING CK+ ++ + ++ M G KP+ I+Y +L+ L
Sbjct: 388 ELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C +L+ +M +G LN T++ +I+ L KG + +A LL++ L G
Sbjct: 448 CSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDL 507
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLV 441
+ I GL + G +ALELL M +K +SP ++ + + S++S+ +N I++
Sbjct: 508 ISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS-IASALSREGRIN-KVIQMF 565
Query: 442 DQILNT 447
D I +T
Sbjct: 566 DNIQDT 571
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 167/375 (44%), Gaps = 25/375 (6%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY + V++ L + D +VLD + +R P + +++ F+
Sbjct: 119 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHV-ILEAACRGGGFRS-- 175
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
A+ +L + G +D C+L+L+++C+Q S D+ L +++
Sbjct: 176 ----------------AVRVLEDLHARGCALDVGNCNLVLNAICDQG--SVDKALHLLRD 217
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G +V Y V++ L ++ ++ +M P+IV + +++ +
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGL 277
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ + E+ ++ G PD+ Y I+G+CK+ +++ +++ M G KP+V+ YNT
Sbjct: 278 FERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNT 337
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL+ LC EL+ EM K L+ T++I++D G + LLE+ L G
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHG 397
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ I G C+ GL+ +A+ LLK M P + +L S +V+
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457
Query: 437 FIRLVDQILNTPCKM 451
L+ Q++ C +
Sbjct: 458 --DLMSQMIQQGCPL 470
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 6/263 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ +++M G ++ YT VI K+ + +A+ +L M + G KP+ + YT+V
Sbjct: 384 DRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L G+ E +V AE+L +++ G + T+N IN LCK+ VE I+++ M G
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD+I+Y+T++ L K + + EL+ M KG+ N YS + L+ +G I +
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ + + + + + +++ I LC+RG +A+E L M P + L+
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 623
Query: 428 SKLDFVNTSFIRLVDQILNTPCK 450
S+ F++ ++L C
Sbjct: 624 SE------GFVKEAQEMLTELCS 640
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 117/225 (52%), Gaps = 4/225 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+ +L M G + + +++L +C +R + +++L+ +M + G + +
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM---SQMIQQGCPLNPITFNT 477
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L KK V A+ +L QM +G PD++ Y+ V++G+ +A EL + ++ G
Sbjct: 478 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 537
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ Y+ + L ++ + I+M +++ + D + YN ++ +LCK E R
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 597
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
E + M G V N TY+I+I GLAS+G + EA +L E +KG
Sbjct: 598 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 35/222 (15%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI------------- 283
+ P+ Y V+ + + A + DE+ G P Y+V +
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177
Query: 284 ----------------------NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
N +C Q +V+ + ++ + G +PDV++YN +L+ L
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL 237
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C + ++EL++EM N+ T++ +I L G +L + G
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDI 297
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
M+ I G+C+ G ++ A E+L +M + P + LL
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLL 339
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 112/275 (40%), Gaps = 56/275 (20%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S + C+P +Y V+K L
Sbjct: 424 LLKSMTACGCKPNTISYTIVLKGL------------------------------------ 447
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A R+ D+ +L + MI G ++ T + +++ +C++ +
Sbjct: 448 CSAERWVDAEDLMSQ------------------MIQQGCPLNPITFNTLINFLCKKGLV- 488
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
++ + +++M G ++ Y+ VI L K K +AL +LN M + G+ P+ + Y+
Sbjct: 489 -EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ + + + K ++FD + + D YN I+ LCK+ E I+ +A M G
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
P+ TY L++ L + +E++ E+ KG
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN + G C+ +E+ ++ A + P+ TY +++ALC + ++ EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+G Y ++++ G A +LE+ +G + + +C +G V
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
KAL LL+ + P + A+L
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVL 234
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 148/341 (43%), Gaps = 51/341 (14%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQE-------- 196
R R+ F E+ M+ D T ++ + C++ +S LL V E
Sbjct: 239 RAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNA 298
Query: 197 -MKKL--GFC----FGMVD-----------------YTNVIRSLVKKEKVFDALGILNQM 232
KL GFC +G V Y V+ L K K + + +
Sbjct: 299 AFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDL 358
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K G PD V YT +++G+ + A +L+ E++ G +P+ YTYN I+G K N+
Sbjct: 359 KDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNL 418
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
E KM M + G ++YN +++ LC ++ +L +EM KGI+ N TY+ +
Sbjct: 419 EEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNAL 478
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ G +G I+E LL E L++G+ ++ + I LCQ G ++ A L M ++ +
Sbjct: 479 VRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGM 538
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCKMEG 453
P +V DF+ T F + C MEG
Sbjct: 539 EP-----------AVCTHDFMITGFCK-------QGCAMEG 561
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 25/331 (7%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVD---GKTCSLILSS 178
L++ + D +R D NL ++ + + A N +I+ GFC D G+ L+ S
Sbjct: 268 LVQAFCDENRISDGHNLLRRVLEDGVVPRNAA---FNKLIS-GFCKDKAYGRVSDLLHSM 323
Query: 179 VCEQRD---LSSDELL-----------GF--VQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
+ R + E++ GF +++K G+ V YT +I L + + +
Sbjct: 324 IARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWL 383
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DA + +M G P+ Y +++G + +A +++ E+ G +YNV
Sbjct: 384 GDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVM 443
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I GLC ++ + M G + ITYN L++ CK ++ L+ E+ +GI
Sbjct: 444 IKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGI 503
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ +Y+ +ID L +GD+ A L ++ N+G+ D I G C++G + +E
Sbjct: 504 QPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGME 563
Query: 403 LLKQMADKDVSPGARVWEALL--LSSVSKLD 431
L M + P + +E+L+ LS + +LD
Sbjct: 564 WLTTMLRSKLRPQKKSFESLIQCLSQIDRLD 594
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 5/260 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF D +C+++ ++ E ++ + + F IR L K V
Sbjct: 155 GFSPDSSSCNVLFDALVEAGACNAAKSF-----LDSTNFNPKPASLEAYIRCLCKGGLVE 209
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A+ + Q+K G+ I + VL G + EL+ E++ +V DV+T +
Sbjct: 210 EAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLV 269
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
C +N + G ++ + E G P +N L+ CK + R+ +L+ M +
Sbjct: 270 QAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRA 329
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ TY +++GL G E + ++ ++G M+ I GLC+ + A +L
Sbjct: 330 PDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKL 389
Query: 404 LKQMADKDVSPGARVWEALL 423
+M K P + A++
Sbjct: 390 WFEMIQKGFLPNEYTYNAMI 409
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 2/244 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G+ D + ++ +C + L L F EM + GF Y +I K +
Sbjct: 362 GYAPDRVMYTTMIHGLCRMKWLGDARKLWF--EMIQKGFLPNEYTYNAMIHGYFKIGNLE 419
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A + +M G V Y +++ G+ +A +LF+E+ G++ + TYN +
Sbjct: 420 EAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALV 479
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
G CK+ + G ++ + + G +P +Y L+ LC+ ++ + L +M+ +G+
Sbjct: 480 RGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGME 539
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ T+ MI G +G +E L L L Q F+ I L Q + AL +
Sbjct: 540 PAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLV 599
Query: 404 LKQM 407
L M
Sbjct: 600 LDSM 603
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/316 (18%), Positives = 131/316 (41%), Gaps = 20/316 (6%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
+S LLHS N P Y V+ L + + + V ++ R + ++ +I
Sbjct: 316 VSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDR-GYAPDRVMYTTMI 374
Query: 124 KTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFC 166
D+ L++++ + F+I + A ++ M + G+
Sbjct: 375 HGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYG 434
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
+ ++++ +C + E +EM G + Y ++R K+ K+ +
Sbjct: 435 EKTVSYNVMIKGLCSHGKIK--EAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGA 492
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+L ++ GI+P Y +++ + + D A+ L+D++ G+ P V T++ I G
Sbjct: 493 NLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGF 552
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CKQ G++ + M +P ++ +L+Q L ++ L+ ++ M G L++
Sbjct: 553 CKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSI 612
Query: 347 QTYSIMIDGLASKGDI 362
+ ++ L K +
Sbjct: 613 SICNSLVTKLCEKNSL 628
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 194/466 (41%), Gaps = 66/466 (14%)
Query: 11 NLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNV-KQSLTTPPTKQQQQIPKQPHILSSLLH 69
+L L+K + PL P+ L +Q N+ K+S K + I H S+ +
Sbjct: 8 SLLLKKQK--PLVPFVLNTINPLQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKSIAN 65
Query: 70 SFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADA 129
S S + P Y +IK L I +L + K E E +F+ +I Y A
Sbjct: 66 SNSF---KHTPLTYTTMIKRLGYERDIDGIQYLL-QLMKLEGISCNEDLFVIVINAYRRA 121
Query: 130 HRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTC 172
+ ++ FY+I +F N+ I N M DG ++ T
Sbjct: 122 GLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTY 181
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+++L ++C+ + + L + EM G V YT V+ S+ + KV +A +
Sbjct: 182 NMLLKALCKNDRVDAARKL--LAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL---- 235
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
S IK + Y ++NG + + ELF+E+ V G+ PDV TY+ IN L + NV
Sbjct: 236 -SMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNV 294
Query: 293 EAGIKMIACM--------------------------EEL---------GSKPDVITYNTL 317
E + ++A M E L GS+P+ + YNTL
Sbjct: 295 EMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTL 354
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LC ++ + ++M+ G+ N TYS +IDG A GD++ A + + + G
Sbjct: 355 IHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGC 414
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + LC+ + AL L++ MA+ + P + +
Sbjct: 415 LPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFI 460
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 165/418 (39%), Gaps = 65/418 (15%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKR---ENFETPEFIFIDLI 123
L + ++ +P Y VI TL+E +VL + R N T F L+
Sbjct: 265 LFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHT----FTSLM 320
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
K Y F R+ A+++ N MI +G + + ++ +C
Sbjct: 321 KGY------------------FMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYG 362
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+ E + Q+M++ G Y+ +I K + A I N+M ++G P++V
Sbjct: 363 KMV--EAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVV 420
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT +++ + + A L + + P+ T+N +I GLC E +K++ M
Sbjct: 421 YTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMR 480
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ G P+V TYN +L L + ++V E++ I NL TY+ ++ G G
Sbjct: 481 QYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFK 540
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL-------------------- 403
A + + L G S ++ I C++G V+ A++L
Sbjct: 541 GALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSL 600
Query: 404 ----------------LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
L +M ++ + P W AL+ SKL + I +VD IL
Sbjct: 601 LWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGP--IHIVDNIL 656
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 174/401 (43%), Gaps = 39/401 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S C P +Y V+ S C + V + E ++ ++ LI +
Sbjct: 200 LLAEMSYKGCIPDAVSYTTVV------SSMCRLGKVEEARELSMRIKSFVPVYNALINGF 253
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
H+ ++ LF ++ I+ V A+ +L M G +
Sbjct: 254 CREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNV 313
Query: 170 KTCSLILSS------VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
T + ++ +CE DL + +QE G V Y +I L K+
Sbjct: 314 HTFTSLMKGYFMGGRLCEALDLWNR----MIQE----GSEPNTVAYNTLIHGLCSYGKMV 365
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A+ + +M+ +G+ P+ Y+ +++G D V A E++++++ G +P+V Y +
Sbjct: 366 EAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMV 425
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ LC+ + + +I M P+ IT+NT ++ LC + +++ +M+ G
Sbjct: 426 DVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCA 485
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ TY+ ++DGL + EA ++ E + + ++ + G C G+ + AL++
Sbjct: 486 PNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQI 545
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
++ P + + ++ + + + V T+ I+LVD++
Sbjct: 546 AGKLLVGGTKPDSITYNTVIYAYCKQGE-VKTA-IQLVDRL 584
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 2/280 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A + + M + T ++ VC+ + + E+L + EM+ G
Sbjct: 334 RLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEIL--LLEMQSKGVDLN 391
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + + ++ K+ +AL + M+ GI D+ Y ++ NG+ Y +A+ + +
Sbjct: 392 LVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILN 451
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+V T+ ++I CK+ N+ ++ ME+ G P++ITYNTL+ A CK
Sbjct: 452 SMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKE 511
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + ++ EM KG++ +L TYS +I G G + EA L E KG+ + +
Sbjct: 512 KVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYT 571
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I GL + G +A +L +M + P RV+ +L+ S
Sbjct: 572 SMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGS 611
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 170/371 (45%), Gaps = 14/371 (3%)
Query: 60 QPHILSSLLH----SFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETP 115
QPH + H S + +P +A+ +I L E +F + S+L+ + + E P
Sbjct: 69 QPHSCLAFFHFLKTQHSNISLKPDLKAHLILISRLFEARKFATMKSILNGLVTDSDIECP 128
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRV-GFAIEILNCMINDGFCVDGKTCSL 174
+DL+ + ++H + ++ +++ NR+ I + + + G ++ ++C +
Sbjct: 129 VSSIVDLVDEF-ESHFVEKFCDMLFRVCS--DNRLFDETIRVYDYVEEKGLVIEERSCFV 185
Query: 175 ILSSV--CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+L ++ C + D V+ K F + T VI L ++ +V A ++++M
Sbjct: 186 LLLALKRCGEVDFCVRFFHRMVESNK---FEIRVQSLTLVIDVLCRRGEVEKAKELMDEM 242
Query: 233 KSDGI-KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
GI KP++ Y +LN + ++D +E+ + +V V TY++ I +
Sbjct: 243 VGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGD 302
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+E K+ M E + DV Y++++ ++ + R L EM + IV N TY
Sbjct: 303 IEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGA 362
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I G+ G + A LL E +KG+ +F+ T+ G C+RG + +AL L M K
Sbjct: 363 LIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKG 422
Query: 412 VSPGARVWEAL 422
++ + L
Sbjct: 423 INADVFTYNIL 433
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELG-SKPDVITYNTLLQALCKVRELNRLRELV 334
V + + I+ LC++ VE +++ M G KP+V TYNTLL A ++ + E++
Sbjct: 216 VQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEIL 275
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
K M+ + +V ++ TYSI+I +S GDI EA + EE K + ++ I +
Sbjct: 276 KLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRL 335
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G +++A L +M+ +D+ P A + AL+
Sbjct: 336 GNMKRAFALFDEMSQRDIVPNAHTYGALI 364
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+++R A ILN M+ G + T ++ + C++ +L+ E L ++M+K G
Sbjct: 439 KLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERL--FRDMEKKGEVPN 496
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I + KKEKV A I ++M + G+ PD+ Y+ +++G + +A +LF+
Sbjct: 497 IITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFN 556
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E+ + G+ +V TY I+GL K+ + K+ M ++G PD + +L+ + K
Sbjct: 557 EMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 167/334 (50%), Gaps = 23/334 (6%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
P + +++ L++ ++ +++ I K + + E + + ++K YA + ++++ F
Sbjct: 43 PHIFLLILRRLSDPKLVVHVTRIVELI-KTQKCKCTEDVVLTVLKAYAKSKMPNEALDCF 101
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
K+ EI C G ++ + +L++ E L E F+ +
Sbjct: 102 QKME-----------EIFGC--KPGI----RSYNALLNAFIEANLLEKAE--SFLAYFET 142
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
+G + Y +I+ VKK + +A G+L+ M S +KPD+ Y V+NG++ D V
Sbjct: 143 VGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVS 202
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS--KPDVITYNTL 317
A E+FDE+ GLVPDV YN+ I+G K+ + G ++ + + GS P+V+TYN +
Sbjct: 203 ALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVK-GSCVYPNVVTYNVM 261
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LCK+ + E+ + MK ++L TYS +I GL G++ A + +E + + +
Sbjct: 262 INGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSV 321
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
++ + G C+ G ++++ EL M ++
Sbjct: 322 VVDVVTYNALLNGFCRAGKIKESFELWVMMGKEN 355
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 119/234 (50%), Gaps = 2/234 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+ I++ M G + C+ +++ L +E + F +EM+ G +V
Sbjct: 443 GRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKL--EEAICFFREMETKGCSPTVV 500
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L K E+ DA + +M KPD++ Y+++++G+ + A L+ ++
Sbjct: 501 SYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQV 560
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
LV GL PDV +N+ ++GLC +E + + + M++ P+++T+NTL+ L K RE
Sbjct: 561 LVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKAREC 620
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
+ M G ++ +Y+I + GL S G I + L ++AL G+ S
Sbjct: 621 EMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTS 674
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 150/357 (42%), Gaps = 27/357 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y+ +I L + +F + + + ++K E E F + LI D +V
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNE-CEMDLFTYSSLICGLCDVGNVDGAVE 311
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGK--------------------TCSLILS 177
++ ++ K V + N ++N GFC GK + ++ +
Sbjct: 312 VYKEMVK---RSVVVDVVTYNALLN-GFCRAGKIKESFELWVMMGKENCHNVVSYNIFIR 367
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+ E R + +E + + +++ G Y +I L K + AL IL + K G
Sbjct: 368 GLFENRKV--EEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGD 425
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
K D Y+ +++G+ Q +A + ++ G + N ING + + +E I
Sbjct: 426 KLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAIC 485
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
ME G P V++YNTL+ LCK + VKEM K ++ TYS+++DGL
Sbjct: 486 FFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLC 545
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
I A L + L KGL +M + + GLC G + AL L M + P
Sbjct: 546 QGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLP 602
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 121/239 (50%), Gaps = 4/239 (1%)
Query: 188 DELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+E L Q+M+++ C G+ Y ++ + ++ + A L ++ GI P++ Y +
Sbjct: 95 NEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNI 154
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ + + +V+A+ L D + L PDVY+Y ING+ K ++ + +++ M E G
Sbjct: 155 LIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERG 214
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEA 365
PDV+ YN ++ K + + +E+ + + K + N+ TY++MI+GL G E+
Sbjct: 215 LVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDES 274
Query: 366 CGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E + K C + ICGLC G V A+E+ K+M + V + ALL
Sbjct: 275 LEMWER-MKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALL 332
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 302 MEEL-GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
MEE+ G KP + +YN LL A + L + + + GI+ NLQTY+I+I K
Sbjct: 104 MEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKR 163
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+EA GLL+ +K L + I G+ + G + ALE+ +M ++ + P +
Sbjct: 164 QFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYN 223
Query: 421 ALLLSSVSKLDFV 433
++ + D+V
Sbjct: 224 IMIDGFFKRGDYV 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 23/266 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
++H Y CE P + +I S+ + +E + +P + + LI
Sbjct: 450 GIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGC--SPTVVSYNTLIN 507
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
A RF D A + M+ + D T SL++ +C+ +
Sbjct: 508 GLCKAERFSD------------------AYSFVKEMLEKDWKPDMITYSLLMDGLCQGKK 549
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ D L +++ G + + ++ L K+ DAL + + MK P++V +
Sbjct: 550 I--DMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTH 607
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++G+ + A ++ + G PD+ +YN+ + GLC + GI + +
Sbjct: 608 NTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALK 667
Query: 305 LGSKPDVITYNTLLQALCKVRELNRL 330
G P IT+ L++A+ K+ L+ L
Sbjct: 668 NGILPTSITWYILVRAVLKLGPLDSL 693
>gi|222615377|gb|EEE51509.1| hypothetical protein OsJ_32675 [Oryza sativa Japonica Group]
Length = 830
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 135/257 (52%), Gaps = 8/257 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +R A ++L CM + D +C +LSS+C+ S+ + + F+ +M G
Sbjct: 218 QAHRPAAAADLLCCMPSLLLDPDLASCRAVLSSLCQY--ASAQDAVAFLDKMCHWGISPS 275
Query: 206 MVDYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
DY V +L+++ KV +A ++ N+M S+ + P + + + + ++ EE+F
Sbjct: 276 RSDYHAVFDALLQEGKVAEAYEVMKNKMGSNRVAPALAYFKLTMQAFSECLEFDSVEEVF 335
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L+ GLVPDV Y+VYI+ LC++ ++ +M+ CME G PDV T+ ++
Sbjct: 336 DEMLLRGLVPDVDVYSVYISALCRKGDLAGARQMMTCMEHAGCPPDVRTFGVVVAGCMSA 395
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD-IIEACGLLEEALNKGLCTQSSM 383
++ +RELV+E +G+ + S +I GL GD ++ LL E L + +
Sbjct: 396 GDMGTVRELVQEAIRRGLQWDPPALSELI-GLLQAGDGATQSQELLLEPL---FVHDAPV 451
Query: 384 FDETICGLCQRGLVRKA 400
+ I LC++GL+ A
Sbjct: 452 LGQLIGALCKQGLLGPA 468
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 13/238 (5%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN---VIRSLVKKEKVFDALGILNQ 231
+L+++C SS L F ++ L D T +I +L + + A +L
Sbjct: 177 LLAAIC-----SSPAFLRFAPKVLLLAAPSVSPDATTFHILISTLCQAHRPAAAADLLCC 231
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M S + PD+ VL+ + A D++ G+ P Y+ + L ++
Sbjct: 232 MPSLLLDPDLASCRAVLSSLCQYASAQDAVAFLDKMCHWGISPSRSDYHAVFDALLQEGK 291
Query: 292 VEAGIKMIACMEELGSK---PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
V +++ ++GS P + + +QA + E + + E+ EM +G+V ++
Sbjct: 292 VAEAYEVM--KNKMGSNRVAPALAYFKLTMQAFSECLEFDSVEEVFDEMLLRGLVPDVDV 349
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
YS+ I L KGD+ A ++ + G F + G G + EL+++
Sbjct: 350 YSVYISALCRKGDLAGARQMMTCMEHAGCPPDVRTFGVVVAGCMSAGDMGTVRELVQE 407
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 75/202 (37%), Gaps = 36/202 (17%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L + PD T+++ I+ LC+ + A ++ CM L PD+ + +L +LC+
Sbjct: 197 LAAPSVSPDATTFHILISTLCQAHRPAAAADLLCCMPSLLLDPDLASCRAVLSSLCQYAS 256
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL----------------- 369
+ +M GI + Y + D L +G + EA ++
Sbjct: 257 AQDAVAFLDKMCHWGISPSRSDYHAVFDALLQEGKVAEAYEVMKNKMGSNRVAPALAYFK 316
Query: 370 -------------------EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+E L +GL ++ I LC++G + A +++ M
Sbjct: 317 LTMQAFSECLEFDSVEEVFDEMLLRGLVPDVDVYSVYISALCRKGDLAGARQMMTCMEHA 376
Query: 411 DVSPGARVWEALLLSSVSKLDF 432
P R + ++ +S D
Sbjct: 377 GCPPDVRTFGVVVAGCMSAGDM 398
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++ M+ G V T ++ CE+ L LG +EM G +V Y +
Sbjct: 244 AKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLG--EEMLSRGAVPTLVTYNTI 301
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K +V DA +L+ M + + PD+V Y ++ G + +A LF EL GL
Sbjct: 302 MYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGL 361
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VP V TYN I+GLC+ +++ +++ M + G PDV T+ L++ CK+ L +E
Sbjct: 362 VPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKE 421
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM +G+ + Y I G GD +A G+ EE L +G ++ I GL
Sbjct: 422 LFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 481
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G +++A EL+K+M + P + +++
Sbjct: 482 KLGNLKEASELVKKMLYNGLVPDHVTYTSII 512
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 133/257 (51%), Gaps = 5/257 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D K C+ +L + RD S D M + G +V Y ++ S K+
Sbjct: 145 MVSKGMLPDLKNCNRVLR-LLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQ 203
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
KV +AL +L QM+ G P+ V Y +++NG+ + +A+EL E+L LGL YTY
Sbjct: 204 GKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTY 263
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I G C++ ++ ++ M G+ P ++TYNT++ LCK ++ R+L+ M
Sbjct: 264 DPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVN 323
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
K ++ +L +Y+ +I G G+I EA L E +GL ++ I GLC+ G +
Sbjct: 324 KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDV 383
Query: 400 AL----ELLKQMADKDV 412
A+ E++K D DV
Sbjct: 384 AMRLKDEMIKHGPDPDV 400
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 122/243 (50%), Gaps = 6/243 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + A E+ + M+N G D + I V E + + G +EM GF
Sbjct: 412 KLGNLPMAKELFDEMLNRGLQPD--RFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPD 469
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y I L K + +A ++ +M +G+ PD V YT +++ ++ KA +F
Sbjct: 470 LITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFL 529
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L G+ P V TY V I+ + ++ I M E G P+VITYN L+ LCKVR
Sbjct: 530 EMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVR 589
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL----CTQS 381
++++ + EM+ KGI N TY+I+I+ + G EA L ++ L++ + CT S
Sbjct: 590 KMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHS 649
Query: 382 SMF 384
++
Sbjct: 650 ALL 652
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 162/378 (42%), Gaps = 26/378 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P Y+ ++ L+ + + ++ + R E + + LI+ Y + + +
Sbjct: 220 GCLPNDVTYNVLVNGLSHSGELEQAKELIQEM-LRLGLEVSAYTYDPLIRGYCEKGQLDE 278
Query: 135 SVNL-------------------FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
+ L Y + K+ RV A ++L+ M+N D + + +
Sbjct: 279 ASRLGEEMLSRGAVPTLVTYNTIMYGLCKW--GRVSDARKLLDVMVNKNLMPDLVSYNTL 336
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ ++ LL E++ G +V Y +I L + + A+ + ++M
Sbjct: 337 IYGYTRLGNIGEAFLL--FAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKH 394
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G PD+ +T+++ G + A+ELFDE+L GL PD + Y I G K +
Sbjct: 395 GPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKA 454
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
M M G PD+ITYN + L K+ L ELVK+M + G+V + TY+ +I
Sbjct: 455 FGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHA 514
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G + +A + E L+KG+ + I RG ++ A+ +M +K V P
Sbjct: 515 HLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPN 574
Query: 416 ARVWEALL--LSSVSKLD 431
+ AL+ L V K+D
Sbjct: 575 VITYNALINGLCKVRKMD 592
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 118/222 (53%), Gaps = 2/222 (0%)
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVLGLVPDV 276
KK + L + +M S G+ PD+ VL + ++ + A E+++ ++ G+ P V
Sbjct: 131 KKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTV 190
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
TYN ++ CKQ V+ ++++ M+++G P+ +TYN L+ L EL + +EL++E
Sbjct: 191 VTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQE 250
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M G+ ++ TY +I G KG + EA L EE L++G ++ + GLC+ G
Sbjct: 251 MLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGR 310
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
V A +LL M +K++ P + L+ ++L + +F+
Sbjct: 311 VSDARKLLDVMVNKNLMPDLVSYNTLIY-GYTRLGNIGEAFL 351
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ +G A + + G T + ++ +C DL D + EM K G
Sbjct: 342 RLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDL--DVAMRLKDEMIKHGPDPD 399
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T ++R K + A + ++M + G++PD Y + G + D KA + +
Sbjct: 400 VFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQE 459
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L G PD+ TYNV+I+GL K N++ +++ M G PD +TY +++ A
Sbjct: 460 EMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 519
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + R + EM KGI ++ TY+++I A +G + A E KG+ ++
Sbjct: 520 HLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYN 579
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ + +A + +M K +SP + L+
Sbjct: 580 ALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILI 617
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 7/237 (2%)
Query: 212 VIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
V+R L ++ D A + N M GI+P +V Y +L+ Q +A +L ++ +
Sbjct: 160 VLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKM 219
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G +P+ TYNV +NGL +E ++I M LG + TY+ L++ C+ +L+
Sbjct: 220 GCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEA 279
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L +EM +G V L TY+ ++ GL G + +A LL+ +NK L ++ I G
Sbjct: 280 SRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYG 339
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
+ G + +A L ++ + + P + L+ L + LD +RL D+++
Sbjct: 340 YTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVA----MRLKDEMI 392
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ GF D T ++ + + + +L L V++M G V YT++I + +
Sbjct: 461 MLARGFPPDLITYNVFIDGLHKLGNLKEASEL--VKKMLYNGLVPDHVTYTSIIHAHLMA 518
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ A + +M S GI P +V YT++++ V+ A F E+ G+ P+V TY
Sbjct: 519 GHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 578
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N INGLCK ++ K M+ G P+ TY L+ C + L K+M
Sbjct: 579 NALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 638
Query: 340 KGIVLNLQTYSIMIDGL 356
+ I + T+S ++ L
Sbjct: 639 REIQPDSCTHSALLKHL 655
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 2/181 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++ M+ +G D T + I+ + L + F++ + K G +V YT +
Sbjct: 489 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAV-FLEMLSK-GIFPSVVTYTVL 546
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I S + ++ A+ +M G+ P+++ Y ++NG+ +A + F E+ G+
Sbjct: 547 IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGI 606
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ YTY + IN C + + +++ M + +PD T++ LL+ L K + + +R
Sbjct: 607 SPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVVRH 666
Query: 333 L 333
L
Sbjct: 667 L 667
>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 408
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 18/237 (7%)
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ +V YT +I L K + V DA + +M + + PD+ Y ++ G V A L
Sbjct: 152 YDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGL 211
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F+++ + + D YT+N ++ CK+ NV G ++A M + G KPD+ITYN+L+ C
Sbjct: 212 FNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCL 271
Query: 324 VRELNRLRELVKEMKWKGIVLNLQT------------------YSIMIDGLASKGDIIEA 365
V+E+++ + + M +G+ N++T YS +IDG G I +A
Sbjct: 272 VKEVDKAKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQA 331
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
L++E ++G ++ + LC+ V K + LL+++ K + P A + L
Sbjct: 332 LELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTIL 388
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV + N MI GFCV G+ + +G +MK
Sbjct: 184 RVSPDVFTYNAMIY-GFCVVGRL----------------KDAIGLFNDMKLENVEADEYT 226
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++ + K+ V + ++ M +G+KPDI+ Y +++G + ++ KA+ +F+ ++
Sbjct: 227 FNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMV 286
Query: 269 VLG------------------LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
G ++PD Y+ I+G CK + ++++ M + G P+
Sbjct: 287 QRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPN 346
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+ITYN++L ALCK+ + + L++++K KGI + TY+I+ +GL G + EA
Sbjct: 347 IITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEA 401
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++ SL + AL ++ GIKPD+ Y +++N F +L
Sbjct: 66 FGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLIN-------------CFSQLG 112
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ D +Y INGLCK A ++++ + E + DV+ Y ++ LCK + ++
Sbjct: 113 HTHFL-DRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVD 171
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L EM K + ++ TY+ MI G G + +A GL + + + F+ +
Sbjct: 172 DAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLV 231
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G VR+ ++ M + V P + +L+
Sbjct: 232 SAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLM 266
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ AI + N M + D T + ++S+ C++ ++ + + V M K G +
Sbjct: 202 VGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAV--VAVMMKEGVKPDI 259
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIK------------------PDIVCYTMVL 248
+ Y +++ ++V A I N M G+ PD + Y+ ++
Sbjct: 260 ITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLI 319
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G +A EL DE+ G P++ TYN + LCK ++VE I ++ ++ G +
Sbjct: 320 DGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQ 379
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEM 337
PD TY L L K L RE+ ++
Sbjct: 380 PDAYTYTILTNGLFKDGRLEEAREIFPDL 408
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 38/256 (14%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ DY V++SL + + AL I +M DG+ P IV Y ++NG+ + ELF
Sbjct: 45 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+EL+ G PDV TYN I+ LCK ++E ++ M G P+V+TY+ L+ LCKV
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164
Query: 325 RELNRLRELVKEMKWKG--IVLNLQTYSIMIDGLASKGDIIEACGLLE------------ 370
++ REL++EM K ++ N+ TY+ +DGL + EAC L+
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 224
Query: 371 ----EALNKGLC----TQSSMFDETIC---------------GLCQRGLVRKALELLKQM 407
L GLC T + D+ I GLC+ + +A +++ M
Sbjct: 225 TVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESM 284
Query: 408 ADKDVSPGARVWEALL 423
DK V+P + L+
Sbjct: 285 VDKGVTPDVITYSVLV 300
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ M++ G D T S+++ + C+ + DE L + M G +V + ++
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRV--DEALELLHGMASRGCTPNVVTFNSI 334
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K ++ +A I Q+ + + PD V + +++ G ++ +A LF+E++ +
Sbjct: 335 IDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNM 394
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV T+ I+GLCK VEA ++ M LG P+V+TYN L+ LCK + E
Sbjct: 395 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCE 454
Query: 333 LVKEMKWKGIV-----------------------------------LNLQTYSIMIDGLA 357
++EM G V + TY+I++DGL
Sbjct: 455 FLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLW 514
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G +A +LEE + KG S F GL + G + +ELL+ + K + P A
Sbjct: 515 KSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDAT 574
Query: 418 VWEALL 423
++L
Sbjct: 575 TCSSIL 580
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 130/264 (49%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI G+ + T + +++ +C+ + + ++ M G ++ Y+ ++ + K
Sbjct: 249 MIAGGYVPNVVTYNALVNGLCKADKMERAHAM--IESMVDKGVTPDVITYSVLVDAFCKA 306
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +AL +L+ M S G P++V + +++G+ + +A ++ ++ LVPD T+
Sbjct: 307 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTF 366
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ I G CK N E + M +PDV+T+ L+ LCK ++ R+++ M
Sbjct: 367 NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ N+ TY++++ GL G I E C LEE ++ G +S + + LC+
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL+L+ ++ P + L+
Sbjct: 487 ALQLVSKLKSFGWDPDTVTYNILV 510
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 14/296 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N +G +E+ ++ G D T + ++ S+C+ DL +E M G +V
Sbjct: 95 NELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDL--EEARRLHGGMSSRGCVPNVV 152
Query: 208 DYTNVIRSLVKKEKVFDALGILNQM--KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y+ +I L K ++ +A ++ +M KS + P+I+ Y L+G+ Q +A EL
Sbjct: 153 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 212
Query: 266 ELL--VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL---GSKPDVITYNTLLQA 320
L L + PD T++ I+GLCK + AC +++ G P+V+TYN L+
Sbjct: 213 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE-----ACNDDMIAGGYVPNVVTYNALVNG 267
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK ++ R +++ M KG+ ++ TYS+++D + EA LL ++G
Sbjct: 268 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 327
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
F+ I GLC+ +A ++ Q+ ++ + P + L+ + +F S
Sbjct: 328 VVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQAS 383
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 110/217 (50%), Gaps = 2/217 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V ++ +I L K + +A + M + G P++V Y ++NG+ + +A + +
Sbjct: 226 VTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIES 283
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G+ PDV TY+V ++ CK + V+ ++++ M G P+V+T+N+++ LCK
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ ++ + +V + T++I+I G G+ +A L EE + K + F
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G V A ++L M + V P + L+
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLV 440
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 27/291 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
LLH + C P ++ +I L ++ + + + + R P+ + F LI
Sbjct: 315 LLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNR--MLVPDKVTFNILIAG 372
Query: 126 YADAHRFQDSVNLFYKI--PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
A F+ + LF ++ + + + F I DG C G+ V R
Sbjct: 373 ACKAGNFEQASALFEEMVAKNMQPDVMTFGALI------DGLCKAGQ--------VEAAR 418
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D+ + M LG +V Y ++ L K ++ + L +M S G P+ +
Sbjct: 419 DI--------LDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMT 470
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y ++ + A +L +L G PD TYN+ ++GL K E I ++ M
Sbjct: 471 YGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 530
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
G +PD T+ L + L EL++ + KG++ + T S ++D
Sbjct: 531 GKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVK-EMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
S V YN +LQ+LC+ E R E+ + EM G+ + TY+ +I+GL ++
Sbjct: 41 SSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAG 100
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL-- 423
L EE + +G ++ I LC+ G + +A L M+ + P + L+
Sbjct: 101 MELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLING 160
Query: 424 LSSVSKLD 431
L V ++D
Sbjct: 161 LCKVGRID 168
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 115/218 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ K G +V + ++ +K + + + N M++ G++PD+ Y++++NG+ +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A ELFDE+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNT
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNT 281
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK +L + ++L EM KG+ + TY+ +IDG +GD+ A + + +
Sbjct: 282 LIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ + I GLCQ G A ++L++M + P
Sbjct: 342 IRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ + M G
Sbjct: 248 IDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI L+K + G + G + + ++++ + + + A+ +FD + G
Sbjct: 107 VIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V ++N +NG K +++ G ++ M+ G +PDV TY+ L+ LCK +++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM G+V N T++ +IDG G + A + + L++ L ++ I GL
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGL 286
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
C++G +++A +L +M+ K + P + L+ S + D + T+F
Sbjct: 287 CKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGD-LETAF 331
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++G +G T + ++ C+ + D + +M ++ Y +
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYXQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A + ++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G V ++ T
Sbjct: 403 LLKEMQRDGYVPSVVT 418
>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
Length = 667
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 134/263 (50%), Gaps = 3/263 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M+ G D C +++ +C+ + DE M L + Y +
Sbjct: 320 AVELWEEMVRRGLKPDIVACGVLIFGLCKSDKV--DEAFELALRMLSLNLELNVCIYNAL 377
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I ++ + A I++ M+++G +PD+V Y + LN +AE+L +E+ + G+
Sbjct: 378 ISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGI 437
Query: 273 V-PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
V PD Y+YN + GLCK + ++ ++ E+G D+++ N L+ A CK ++++
Sbjct: 438 VNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSAL 497
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L KEM +KGI + TY +I+GL G A + E+ L + ++++ + L
Sbjct: 498 KLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNL 557
Query: 392 CQRGLVRKALELLKQMADKDVSP 414
C+ G +A ++ QM K+VSP
Sbjct: 558 CKAGQFEQAQKIFLQMIQKEVSP 580
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 197/473 (41%), Gaps = 79/473 (16%)
Query: 20 WPLSPYKAK-WHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFS------ 72
WP + A + L++ Q+ +V+ L ++ + P +++ +L S S
Sbjct: 57 WPARMHVADVIGRVLERGQSLDSVELEL------ERLHVDLDPFVVNRVLRSISDSEMAV 110
Query: 73 --IYNCEPPPEAYH------FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+ E P H +V+ L +S F +S L+ + + + ++ L+
Sbjct: 111 RFYWWAESRPGFDHTQFAIAYVVSLLFVDSNFFLLSEFLERV-RSQGVALHRSLYRILLS 169
Query: 125 TYADAHRFQDSVNLFYKI-----PKFRINRVGF-AIEILNC-----------MINDGFCV 167
Y A +F ++ F ++ +F ++ F + + NC ++ GFC+
Sbjct: 170 GYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVALDKGFCL 229
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV-IRSLVKKEKVFDAL 226
T S +S++C+ + E L + +M K G CF + N+ + L K ++ DAL
Sbjct: 230 TSFTYSRWISALCQSERIELVERL--LADMDKFG-CFPDIWACNIYVDCLCKHNRLHDAL 286
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
L M G PD+V YT V+ + + + +A EL++E++ GL PD+ V I GL
Sbjct: 287 KTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGL 346
Query: 287 CKQNNVE-----------------------------------AGIKMIACMEELGSKPDV 311
CK + V+ K+I+ M G +PDV
Sbjct: 347 CKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDV 406
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIV-LNLQTYSIMIDGLASKGDIIEACGLLE 370
+TYN L C + +L++EM+ GIV + +Y+ M+ GL + A G +
Sbjct: 407 VTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVS 466
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G + I C+ V AL+L K+M K + A + L+
Sbjct: 467 DHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLI 519
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQE-MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+L +C+ L D GFV + M+ GFC +V +I + K +KV AL + +M
Sbjct: 448 MLKGLCKAHQL--DRAFGFVSDHMEVGGFC-DIVSCNILIDAFCKAKKVSSALKLFKEMG 504
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
GI+ D V Y ++NG+ Y AEE+F+++L +VP+V YN+ ++ LCK E
Sbjct: 505 YKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFE 564
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
K+ M + PD+IT+NTL+ L K +L ++M +GI + T+ +I
Sbjct: 565 QAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLI 624
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
GL +G +A + E L G+ + D I
Sbjct: 625 SGLLEEGKATQAYEVWEYMLENGIILDRDVSDRLI 659
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 1/245 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F++ ++ G Y ++ V+ K + ++M + G + V Y + ++
Sbjct: 148 FLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLV 207
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ E+ + L G +TY+ +I+ LC+ +E +++A M++ G PD+
Sbjct: 208 KNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIW 267
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
N + LCK L+ + ++ M +G ++ TY+ ++ L EA L EE
Sbjct: 268 ACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEM 327
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ +GL I GLC+ V +A EL +M ++ ++ A L+S +
Sbjct: 328 VRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNA-LISGFLRSGS 386
Query: 433 VNTSF 437
+N +F
Sbjct: 387 INKAF 391
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 188/431 (43%), Gaps = 61/431 (14%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVL-------DHIEKRENFETPEF 117
+SLLH+ + +P FV + E+ + C SS L +++ F+
Sbjct: 116 NSLLHTLLLRGSDPK-----FVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVV 170
Query: 118 IFIDLIKTYADAHRFQDSV-NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+ + L T R ++ N +I KF + E+ + +N G D TCS ++
Sbjct: 171 LRLMLGNTLLPEVRTLSAILNGLLRIRKFIL-----VWEVFDESVNAGVKPDPYTCSAVI 225
Query: 177 SSVCEQRDL--SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
S+CE +D + +++L M+ F +V Y +I L K V +AL + ++
Sbjct: 226 RSLCELKDFCRAKEKILW----MESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLRE 281
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+K D+V Y ++ G + + L +E++ LG VP + ++GL K+ N+++
Sbjct: 282 KGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDS 341
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ + G P++ YN L+ ALCK +L++ L K M + LN TYSI+ID
Sbjct: 342 AYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILID 401
Query: 355 GLASK-----------------------------------GDIIEACGLLEEALNKGLCT 379
+ GD+ A L + +N+GL
Sbjct: 402 SFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEP 461
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIR 439
++ F I G C+ V KA +L ++M +K+++P + AL+ S + S +
Sbjct: 462 TATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS--K 519
Query: 440 LVDQILNTPCK 450
L D+++ K
Sbjct: 520 LFDEMVERKIK 530
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 159/349 (45%), Gaps = 24/349 (6%)
Query: 77 EPPPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
E P Y F +I L ++ + S + D + +R+ + E + +I+ Y AH
Sbjct: 493 EIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERK-IKPTEVTYNVMIEGYCKAHNMDK 551
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
A E+L M+++G D T ++S +C +S+ + F+
Sbjct: 552 ------------------AFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAK--DFI 591
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++ K + Y+ ++ + ++ +AL +M GI D+VC+ ++++G + Q
Sbjct: 592 DDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQ 651
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+D + L ++ GL PD Y I+ K+ + + + + M P+V+TY
Sbjct: 652 QDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTY 711
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+ LCKV E++R L ++M I N TY +D L +G++ EA L E L
Sbjct: 712 TAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML- 770
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KGL ++ ++ I G C+ G + +A ++L +M + + P + ++
Sbjct: 771 KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTII 819
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+++++C+ DL ELL + M + V Y+ +I S K+ + A +M
Sbjct: 364 LINALCKGEDLDKAELL--YKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIE 421
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
DGI+ I Y ++NG D AE L+ +++ GL P T+ I+G CK VE
Sbjct: 422 DGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEK 481
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
K+ M E P V T+ L+ LC E+ +L EM + I TY++MI+
Sbjct: 482 AFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIE 541
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G ++ +A LLE+ L+ GL + + I GLC G V A + + + K++
Sbjct: 542 GYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKL 601
Query: 415 GARVWEALL 423
+ ALL
Sbjct: 602 NEMCYSALL 610
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 4/284 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MIN+G T + ++S C +DL ++ +EM + + +T +I L
Sbjct: 454 MINEGLEPTATTFTTLISGYC--KDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCST 511
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ +A + ++M IKP V Y +++ G + KA EL +++L GLVPD YTY
Sbjct: 512 NEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTY 571
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+GLC V A I + + K + + Y+ LL C L EM
Sbjct: 572 RPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQ 631
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+GI ++L ++++IDG + D+ GLL++ ++GL S ++ I + G +K
Sbjct: 632 RGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKK 691
Query: 400 ALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
+ E L M + P + A + L V ++D F +++
Sbjct: 692 SGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKML 735
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 128/268 (47%), Gaps = 10/268 (3%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI DG + +++ C+ DLS+ E L +M G +T +I K
Sbjct: 419 MIEDGIRETIYPYNSLINGHCKFGDLSAAEFL--YTKMINEGLEPTATTFTTLISGYCKD 476
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V A + +M I P + +T ++ G+ + +A +LFDE++ + P TY
Sbjct: 477 LQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTY 536
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
NV I G CK +N++ +++ M G PD TY L+ LC ++ ++ + ++
Sbjct: 537 NVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHK 596
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEA----CGLLEEALNKGLCTQSSMFDETICGLCQRG 395
K + LN YS ++ G +G + EA C +++ +N L + + D G ++
Sbjct: 597 KNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLID----GAMKQQ 652
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+++ LLK+M D+ + P + ++ +++
Sbjct: 653 DMKRLFGLLKKMYDQGLRPDSVIYTSMI 680
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + I ++N M+ GF S ++ + ++ ++ D V ++ + GF
Sbjct: 300 RVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNI--DSAYDLVVKLGRFGFLPN 357
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I +L K E + A + M S + + V Y+++++ + AE F
Sbjct: 358 LFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFG 417
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ +Y YN ING CK ++ A + M G +P T+ TL+ CK
Sbjct: 418 RMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDL 477
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + +L +EM K I ++ T++ +I GL S ++ EA L +E + + + ++
Sbjct: 478 QVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYN 537
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ + KA ELL+ M + P + L+
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 11/234 (4%)
Query: 203 CF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
CF +V YT + L K ++ A + +M + I P+ V Y L+ + + + +A
Sbjct: 704 CFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEAT 763
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+L E+L GL+ + TYN+ I G CK + K+++ M E G PD ITY+T++
Sbjct: 764 DLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEH 822
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL---- 377
C+ ++ EL M KG+ + ++++I G G + +A L + L++GL
Sbjct: 823 CRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQ 882
Query: 378 CTQSSMFDETIC-----GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
Q D +C G C G V AL L M + V +W+ L L S
Sbjct: 883 ILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLYLLS 936
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 13/182 (7%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM K G Y +IR K ++ +A +L++M +GI PD + Y+ ++
Sbjct: 767 HEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRS 825
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP----- 309
D A EL+D +L G+ PD +N+ I G C ++ ++ M G KP
Sbjct: 826 GDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQ 885
Query: 310 ----DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS---IMIDGLASKGDI 362
D+ N L+ C E++ L M + + L+L+ + ++ G+ SK +
Sbjct: 886 LQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLYLLSYGVISKSEE 945
Query: 363 IE 364
+E
Sbjct: 946 LE 947
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 152/299 (50%), Gaps = 4/299 (1%)
Query: 149 RVGFAIEILNCMINDGFCV-DGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGM 206
RVG A+++L + + C+ D + +++L +C E+R + ELL + + + +
Sbjct: 144 RVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNV 203
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ VI + +V + +M GI PD+V YT V++G+ + + +AE +F +
Sbjct: 204 VSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQ 263
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G+ P++ TYN I+G + ++M+ M G KP+ TY +LL LCK
Sbjct: 264 MIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGR 323
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
R M KGI ++ TY IM+ G A+KG + E LL + G+ +F+
Sbjct: 324 CREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNI 383
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ G++ KA+++ +M + +SP A + AL+ L + ++D F +++++
Sbjct: 384 FFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINE 442
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++LN M+ +G + ++ S+ + + D+ + +M++ G V Y +I
Sbjct: 364 DLLNLMVANGISPNHHIFNIFFSAYAKCGII--DKAMDIFNKMRQQGLSPDAVSYGALID 421
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L K +V DA NQM ++G+ PDIV ++ ++ G+ + + K EELF E+L +G+ P
Sbjct: 422 ALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHP 481
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
++ +N + LCK+ V G +++ +E +G +PDVI+YNTL+ C ++ +L+
Sbjct: 482 NIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLL 541
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+ M G+ + +Y+ ++ G G I A + L+ G+ ++ + GL Q
Sbjct: 542 EGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQT 601
Query: 395 GLVRKALELLKQM 407
+A EL M
Sbjct: 602 KRFSEAKELYLNM 614
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++ M +G Y ++ K ++ A +M S+GI P +V Y +
Sbjct: 535 DEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTI 594
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ + + +A+EL+ ++ G D+YTYN+ +NGLCK N V+ IKM + G
Sbjct: 595 LHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGL 654
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ ++IT+N ++ AL K +L + G+V N+ TY ++++ L +G + E
Sbjct: 655 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDS 714
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L G S M + + L RG + +A L ++ +++ S A L+
Sbjct: 715 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 770
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 129/262 (49%), Gaps = 2/262 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A N MIN+G D S ++ +C E L F EM +G
Sbjct: 425 KLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFF--EMLNVGIHPN 482
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +L K+ +V + +++ ++ G++PD++ Y +++G + +A +L +
Sbjct: 483 IVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLE 542
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ +GL PD ++YN ++G CK +++ M G P V+TYNT+L L + +
Sbjct: 543 GMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTK 602
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +EL M G ++ TY+I+++GL + EA + + +KGL F+
Sbjct: 603 RFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFN 662
Query: 386 ETICGLCQRGLVRKALELLKQM 407
I L + G A++L +
Sbjct: 663 IMIGALLKGGRKEDAMDLFAAI 684
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 9/259 (3%)
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
F V+ T S+++S SSDE + K L + +++ N + K ++ D
Sbjct: 759 FSVEASTTSMLISI------FSSDE---YQHHAKSLPKKYRILNEANSSALIKKARRIDD 809
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A + +M G+ PD+V Y +L+G+ + +A+EL+ ++ ++YTYN+ +N
Sbjct: 810 AYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILN 869
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLCK N V+ KM + G + ++IT+N ++ AL K +L + G+V
Sbjct: 870 GLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVP 929
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
++ TY ++ + L +G + E GL G S + + + L QRG + +A L
Sbjct: 930 DVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYL 989
Query: 405 KQMADKDVSPGARVWEALL 423
++ +K+ S A L+
Sbjct: 990 SKLDEKNFSLEASTTSELI 1008
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 211 NVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
N+ S K + D A+ I N+M+ G+ PD V Y +++ + AE F++++
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ PD+ ++ + GLC + E ++ M +G P+++ +NT+L LCK +
Sbjct: 442 EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVME 501
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ LV ++ G+ ++ +Y+ +IDG G I EA LLE ++ GL S ++ +
Sbjct: 502 GQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLH 561
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ G + A ++M ++PG + +L
Sbjct: 562 GYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTIL 595
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 2/249 (0%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM G +V YT VI L K + A + QM +G+KP+I Y +++G +
Sbjct: 228 EMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIG 287
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ + + +E+ G P+ TY +N LCK M G KP V TY
Sbjct: 288 KWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYG 347
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+L L+ + +L+ M GI N ++I A G I +A + + +
Sbjct: 348 IMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQ 407
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFV 433
GL + + I LC+ G V A QM ++ V+P V+ +L+ L +V K + V
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467
Query: 434 NTSFIRLVD 442
F +++
Sbjct: 468 EELFFEMLN 476
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 153/361 (42%), Gaps = 26/361 (7%)
Query: 67 LLHSFS---IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDL 122
LLH + +++C P +Y VI Q ++ +E + P+ + + +
Sbjct: 187 LLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLF--LEMMDRGIPPDVVTYTTV 244
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
I A F + +F ++ N V I+ NC+I+ G+ GK
Sbjct: 245 IDGLCKAQLFDRAEAVFQQMID---NGVKPNIDTYNCLIH-GYLSIGKW----------- 289
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
E++ ++EM G Y +++ L K + +A + M GIKP +
Sbjct: 290 -----KEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVT 344
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y ++L+G + + +L + ++ G+ P+ + +N++ + K ++ + + M
Sbjct: 345 TYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKM 404
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+ G PD ++Y L+ ALCK+ ++ +M +G+ ++ +S ++ GL +
Sbjct: 405 RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKW 464
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ L E LN G+ F+ +C LC+ G V + L+ + V P + L
Sbjct: 465 EKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL 524
Query: 423 L 423
+
Sbjct: 525 I 525
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 122/296 (41%), Gaps = 30/296 (10%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ R A E+ MIN G D T ++IL+ +C+ + DE + Q + G
Sbjct: 599 FQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCV--DEAIKMFQNLCSKGLQL 656
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ + +I +L+K + DA+ + + ++G+ ++V Y +V+ +I + + + LF
Sbjct: 657 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLF 716
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC-- 322
+ G P+ N + L + ++ ++ ++E + T + L+
Sbjct: 717 SAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSD 776
Query: 323 --------------------------KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K R ++ L +EM KG+ ++ TY+ ++ GL
Sbjct: 777 EYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGL 836
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G EA L +N ++ + GLC+ V +A ++ + + K +
Sbjct: 837 FQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 131/320 (40%), Gaps = 31/320 (9%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+ A M+++G T + IL + + + S + L M G +
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL--NMINSGTKWD 622
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++ L K V +A+ + + S G++ +I+ + +++ ++ A +LF
Sbjct: 623 IYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 682
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ GLV +V TY + + L ++ ++E + + ME+ G+ P+ N L++ L
Sbjct: 683 AIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 742
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS--------------------------- 358
+++R + ++ + + T S++I +S
Sbjct: 743 DISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIK 802
Query: 359 -KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
I +A L E L KGL ++ + GL Q G +A EL M +
Sbjct: 803 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 862
Query: 418 VWEALLLSSVSKLDFVNTSF 437
+ ++L+ + K + V+ +F
Sbjct: 863 TYN-IILNGLCKSNCVDEAF 881
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 39/196 (19%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC---KVRE-- 326
+ P+ TY++ I C+ ++E G + + G + D I N LL LC +V E
Sbjct: 90 VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149
Query: 327 ---LNRLREL--VKEMKWKGIVL-----------------------------NLQTYSIM 352
L R+ EL + + I+L N+ +YS +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G ++G + + L E +++G+ + I GLC+ L +A + +QM D V
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269
Query: 413 SPGARVWEALLLSSVS 428
P + L+ +S
Sbjct: 270 KPNIDTYNCLIHGYLS 285
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 159/344 (46%), Gaps = 21/344 (6%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
++ +I+ A + +F I VLD + KRE E IFI + K AH ++VN F++
Sbjct: 67 TFYRLIENYATSREFHFIHQVLDRM-KREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 125
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDG-KTCSLILSSVCEQRDLS-SDELLGFVQEMKK 199
M ND C K+ + +L+ + ++ D S + + V
Sbjct: 126 ------------------MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANS 167
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
GF ++ Y +I++L K ++ A+ +M PD+ Y+ ++NG+ + +
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A L DE+ G +P+ T+NV I+ L K ++ K++ M G P+ +TYNTL+
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIH 287
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LC +L++ L+++M V N TY +I+GL + + +L +G
Sbjct: 288 GLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKA 347
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GL + G A+ L K+MA+K P V+ A +
Sbjct: 348 NEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFI 391
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 168/383 (43%), Gaps = 37/383 (9%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF--IFIDLIKTYADAHRF 132
NC P Y ++ L + + + +LD ++ P + ID + D R
Sbjct: 204 NCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRA 263
Query: 133 QDSV-NLFYK--IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE 189
V N+F K +P N V + N +I+ G C+ GK D+
Sbjct: 264 AKLVDNMFLKGCVP----NEVTY-----NTLIH-GLCLKGKL----------------DK 297
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
L +++M V Y +I LVK+ + D + IL M+ G K + Y+ +++
Sbjct: 298 ALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLIS 357
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ + A L+ E+ G P+V Y +I+GLC+ + ++ M G P
Sbjct: 358 GLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLP 417
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
+ TY++L++ K + + + KEM + + N+ S++++GL G + EA +
Sbjct: 418 NAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVW 477
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR---VWEALLLSS 426
L +GL + I GLC G V K L+L +M ++ P +R V +L ++
Sbjct: 478 THMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE--PKSRPDVVTYNILFNA 535
Query: 427 VSKLDFVNTSFIRLVDQILNTPC 449
+ + D + T I L++ +L+ C
Sbjct: 536 LCRQDNL-TRAIDLLNSMLDEGC 557
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 22/275 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C P Y +I L + + D +L +E+R + E+I+ LI
Sbjct: 300 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ-KANEYIYSSLISG 358
Query: 126 YADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVD 168
+ +++V L+ ++ + R + A +IL M++ GF +
Sbjct: 359 LFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPN 418
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S ++ ++ D S + + +EM +V + ++ L + ++ +AL +
Sbjct: 419 AFTYSSLMKGFFKKGD--SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTV 476
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL--GLVPDVYTYNVYINGL 286
M +G+KPD+V Y+ ++ G+ K +LF E+ PDV TYN+ N L
Sbjct: 477 WTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNAL 536
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
C+Q+N+ I ++ M + G PD +T N L+ L
Sbjct: 537 CRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 6/274 (2%)
Query: 174 LILSSVCEQRDLS-SDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQ 231
++L S+C R +DELL + E + C V Y VI K+ V A + N+
Sbjct: 184 IVLKSLCSDRKSGQADELLRMMAEGGAV--CLPNAVAYNTVIDGFFKEGDVNKACDLFNE 241
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M GI PD+ Y V+N + KAE + +++ G++PD +TYN I G
Sbjct: 242 MVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQ 301
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ +++ M G PDV+T N+L+ +LCK ++ R++ M KG ++ +Y I
Sbjct: 302 WKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKI 361
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
M++G A+KG +++ L L+ G+ S +F+ I + G++ +A + +M ++
Sbjct: 362 MLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQG 421
Query: 412 VSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
V P + ++ L + K+D F +++DQ
Sbjct: 422 VEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQ 455
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 172/398 (43%), Gaps = 50/398 (12%)
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
+ L LLH C P +Y V+K+L + + +L + + P
Sbjct: 158 RTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLP--- 214
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+A + ++ F+K + +N+ A ++ N M+ G D T + ++++
Sbjct: 215 ---------NAVAYNTVIDGFFK--EGDVNK---ACDLFNEMVQRGISPDLSTYNCVVNA 260
Query: 179 VCEQRDLSSDE---------------------LLGFV------------QEMKKLGFCFG 205
+C+ R + E + G+ ++M G
Sbjct: 261 LCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPD 320
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +++ SL K K+ DA + + M G K DI Y ++LNG + V ELF+
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFN 380
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L G+ PD + +NV I K ++ + M E G +PDV+TY+T++ ALC++
Sbjct: 381 LMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIG 440
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ E +M +G+ ++ TY +I G + GD+++A L+ + +NKG+ F+
Sbjct: 441 KMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFN 500
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC+ G V A + + P V+ L+
Sbjct: 501 FIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLM 538
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 2/259 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
E+ N M++DG D ++++ + + L ++ EM++ G +V Y+ VI
Sbjct: 377 ELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATII--FNEMREQGVEPDVVTYSTVIA 434
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L + K+ DA+ NQM G+ P I Y ++ G D +KA++L +++ G+ P
Sbjct: 435 ALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRP 494
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D+ +N IN LCK V + +G P+V+ YNTL+ C V ++ +
Sbjct: 495 DIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVF 554
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M GI N+ Y +++G G I E L E L+KG+ +++++ + GL Q
Sbjct: 555 DVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQA 614
Query: 395 GLVRKALELLKQMADKDVS 413
G A +M + ++
Sbjct: 615 GRTVPAKVKFHEMTESGIA 633
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 2/260 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A I N M G D T S +++++C R D+ + +M G + Y +
Sbjct: 410 ATIIFNEMREQGVEPDVVTYSTVIAALC--RIGKMDDAVEKFNQMIDQGVAPSISTYHFL 467
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ + A ++ QM + G++PDI C+ ++N + + A+ +FD + +GL
Sbjct: 468 IQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGL 527
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V YN ++G C +E +++ M G +P+V+ Y TL+ CKV ++
Sbjct: 528 HPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLS 587
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +E+ KGI + Y+I++ GL G + A E G+ + + GL
Sbjct: 588 LFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLF 647
Query: 393 QRGLVRKALELLKQMADKDV 412
+ +A+ L K++ +V
Sbjct: 648 KNSCSDEAILLFKELHAMNV 667
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI ++ A+E N MI+ G T ++ C DL + L V +M G
Sbjct: 438 RIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDL--VLQMMNKGMRPD 495
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ + +I +L K +V DA I + S G+ P+++ Y +++G + A +FD
Sbjct: 496 IGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFD 555
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+V Y +NG CK ++ G+ + + G KP YN +L L +
Sbjct: 556 VMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAG 615
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ EM GI ++ TYSI++ GL EA L +E + + +
Sbjct: 616 RTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLN 675
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G+ Q V +A +L ++ + P + ++
Sbjct: 676 IMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMM 713
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 123/271 (45%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + M + G D T + +++S+C+ + M G + Y +
Sbjct: 305 AVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR--DVFDSMAMKGQKTDIFSYKIM 362
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K + D + N M SDGI PD + +++ +A +F+E+ G+
Sbjct: 363 LNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGV 422
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY+ I LC+ ++ ++ M + G P + TY+ L+Q C +L + ++
Sbjct: 423 EPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKD 482
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LV +M KG+ ++ ++ +I+ L G +++A + + ++ GL +++ + G C
Sbjct: 483 LVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYC 542
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + AL + M + P V+ L+
Sbjct: 543 LVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 146/341 (42%), Gaps = 30/341 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISS-VLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P YHF+I+ + VL + K + F FI I R D+
Sbjct: 459 PSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFI--INNLCKLGRVMDAQ 516
Query: 137 NLFYKIPKFRINRVGFA--IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
N+F F I+ +G + + N ++ DG+C+ GK + L
Sbjct: 517 NIF----DFTIS-IGLHPNVMVYNTLM-DGYCLVGKM----------------ENALRVF 554
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
M G +V Y ++ K ++ + L + ++ GIKP Y ++L+G+
Sbjct: 555 DVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQA 614
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
V A+ F E+ G+ D YTY++ + GL K + + I + + + K D+ T
Sbjct: 615 GRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTL 674
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N ++ + ++R + ++L + G+V ++ TYSIM+ L +G + EA + N
Sbjct: 675 NIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMEN 734
Query: 375 KGLCTQ--SSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
G C Q S + + + L ++ + +A L ++ ++ S
Sbjct: 735 AG-CEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFS 774
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 2/252 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G + Y V+ +L K + A IL QM G+ PD Y ++ G
Sbjct: 240 NEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSST 299
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A + ++ G++PDV T N + LCK ++ + M G K D+ +Y
Sbjct: 300 GQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSY 359
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+L L L EL M GI + ++++I A G + A + E
Sbjct: 360 KIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMRE 419
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
+G+ + I LC+ G + A+E QM D+ V+P + L+ + D +
Sbjct: 420 QGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLK 479
Query: 435 TSFIRLVDQILN 446
LV Q++N
Sbjct: 480 AK--DLVLQMMN 489
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G Y+ V+ L K +A+ + ++ + +K DI +++ G+
Sbjct: 625 HEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQI 684
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG-SKPDVIT 313
+A++LF + GLVP V TY++ + L K+ VE M + ME G +P+
Sbjct: 685 RRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQL 744
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
N +++ L + RE+ R + ++ + L+ T +++ID +SKG
Sbjct: 745 LNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKG 791
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 151/329 (45%), Gaps = 27/329 (8%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCS 173
EF + L+ A R D++ L ++ + N V + + + DG C +GK
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV------DGLCKEGKVAE 393
Query: 174 LI-LSSVCEQRDLSSDELL------------------GFVQEMKKLGFCFGMVDYTNVIR 214
+ S+ E+ + ++ELL + +MK G + Y +I
Sbjct: 394 ADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIW 453
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L K +KV +A +L++M G++P+ V YT +++ + +A L ++L G P
Sbjct: 454 GLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQP 513
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+V TY I+GLCK ++ I M ELG P+V Y L+ CK+ LN+ L+
Sbjct: 514 NVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLM 573
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
EM KG+ L+ Y+ +IDG + ++ +A L + + GL + I G C
Sbjct: 574 NEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNM 633
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
++++A +L +M ++P V+ L+
Sbjct: 634 NMMQEARGVLSEMIGTGITPDKTVYNCLI 662
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ EMK+ G +V ++ + + K+ V +A+ + QM+ G+ P+ YT +++G
Sbjct: 292 YFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTC 351
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
A L DE++ GLVP+V TY V ++GLCK+ V +++ ME G K + +
Sbjct: 352 KAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANEL 411
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y TL+ R +L+ +MK KG+ L++ Y +I GL + EA LL +
Sbjct: 412 LYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM 471
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + ++ + L + G +A+ LL ++ D P + AL+
Sbjct: 472 AGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALI 522
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 23/333 (6%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKT--YADAHRFQDSVNLFYKIPKFRINRVGFAIEIL 157
+S++D K + E E + ++ K+ AD + +N F K R+ A
Sbjct: 239 NSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKF-----GRMEKAYSYF 293
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-------GFCFGMVDYT 210
M G + T S + + C++ G VQE KL G YT
Sbjct: 294 GEMKRQGVVANVVTFSTFVDAFCKE---------GLVQEAMKLFAQMRVRGMMPNEFTYT 344
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+++ K ++ DA+ +L++M G+ P++V YT++++G+ + +A+ + +
Sbjct: 345 SLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERG 404
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ + Y I+G NN E + ++ M+ G + DV Y TL+ LCK ++++
Sbjct: 405 GVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEA 464
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ L+ +M G+ N Y+ ++D L G EA LL + L+ G + I G
Sbjct: 465 KSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDG 524
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G + +A+ +M + + P + + AL+
Sbjct: 525 LCKAGSISEAISHFNKMRELGLDPNVQAYTALI 557
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 11/273 (4%)
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+TC+ IL + R G V+ + L + + VI L K+ ++ +A +
Sbjct: 170 RTCNHILLRLARNRQG------GLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALF 223
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+MK+ G PD+V Y +++G D + E+L E+ G DV TYN IN K
Sbjct: 224 VRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKF 283
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+E M+ G +V+T++T + A CK + +L +M+ +G++ N TY
Sbjct: 284 GRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTY 343
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ ++DG G + +A LL+E +++GL + + GLC+ G V +A +L M
Sbjct: 344 TSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMER 403
Query: 410 KDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
V ++ L+ F+N + R +D
Sbjct: 404 GGVKANELLYTTLIHGH-----FMNNNSERALD 431
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 136/308 (44%), Gaps = 21/308 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y ++ L + + + +VL +E R + E ++ LI +
Sbjct: 373 PNVVTYTVMVDGLCKEGKVAEADNVLSLME-RGGVKANELLYTTLIHGH----------- 420
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
F N A+++LN M N G +D ++ +C +D DE + +M
Sbjct: 421 -------FMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLC--KDQKVDEAKSLLHKM 471
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
G V YT ++ +L K K +A+ +L+++ G +P++V Y +++G+
Sbjct: 472 AGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSI 531
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A F+++ LGL P+V Y I+G CK ++ + ++ M + G D + Y +L
Sbjct: 532 SEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSL 591
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ K L L +M G+ L+L Y+ I G + + EA G+L E + G+
Sbjct: 592 IDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGI 651
Query: 378 CTQSSMFD 385
++++
Sbjct: 652 TPDKTVYN 659
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 95/194 (48%), Gaps = 2/194 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ + A+ +L+ +++ GF + T ++ +C+ +S E + +M++LG
Sbjct: 491 FKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSIS--EAISHFNKMRELGLDP 548
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ YT +I K + A+ ++N+M G+ D V YT +++G + Q + A L
Sbjct: 549 NVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALK 608
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ GL D+Y Y +I+G C N ++ +++ M G PD YN L++ K+
Sbjct: 609 TKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKL 668
Query: 325 RELNRLRELVKEMK 338
+ L EM+
Sbjct: 669 GNMEEASSLQNEME 682
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 21/228 (9%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLLH + P Y ++ L + + + ++L I F+ + LI
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILD-SGFQPNVVTYCALIDG 524
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
A ++++ F K+ + ++ ++ +I DGFC G
Sbjct: 525 LCKAGSISEAISHFNKMRELGLDP---NVQAYTALI-DGFCKIG---------------- 564
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
S ++ + + EM G V YT++I +K+ + DA + +M G++ D+ CYT
Sbjct: 565 SLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYT 624
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
++G +A + E++ G+ PD YN I K N+E
Sbjct: 625 CFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNME 672
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R A ++L M D T S I+ S+C RD D + +EM+ G
Sbjct: 205 RSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLC--RDGCIDAAISLFKEMETKGIKSS 262
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +++R L K K D +L M S I P+++ + ++L+ + + +A EL+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G+ P++ TYN ++G C QN + M+ M PD++T+ +L++ C V+
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ ++ + + +G+V N TYSI++ G G I A L +E ++ G+ +
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC G + KALE+ + + + G ++ ++
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 139/280 (49%), Gaps = 17/280 (6%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
+ +N + I LN MIN FC KTC + +LG V KLG+
Sbjct: 113 QLELNGIAHNIYTLNIMIN-CFCRCCKTCF-------------AYSVLGKVM---KLGYE 155
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ +I L + KV A+ ++++M +G +PD+V Y ++NG+ D A ++
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDM 215
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++ + DV+TY+ I+ LC+ ++A I + ME G K V+TYN+L++ LCK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ N L+K+M + IV N+ T+++++D +G + EA L +E + +G+
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + G C + + +A +L M SP + +L+
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 121/240 (50%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D+ D+ + QEM + G+VD++ ++ + ++ L Q++ +GI +I
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+++N A + +++ LG PD T+N INGLC + V + ++ M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G +PD++TYN+++ +C+ + + +++++M+ + + ++ TYS +ID L G I
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A L +E KG+ + ++ + GLC+ G LLK M +++ P + LL
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 118/234 (50%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+L F ++++ G + +I + K A +L ++ G +PD + ++N
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 166
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ ++ KA L D ++ G PD+ TYN +NG+C+ + M+ MEE K
Sbjct: 167 GLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKA 226
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DV TY+T++ +LC+ ++ L KEM+ KGI ++ TY+ ++ GL G + LL
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ +++ + F+ + + G +++A EL K+M + +SP + L+
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 132/313 (42%), Gaps = 37/313 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + FA +L ++ G+ D T + +++ +C + +S +L V M + G
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVL--VDRMVENGCQPD 192
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
MV Y +++ + + A +L +M+ +K D+ Y+ +++ + A LF
Sbjct: 193 MVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G+ V TYN + GLCK G ++ M P+VIT+N LL K
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE--------------E 371
+L EL KEM +GI N+ TY+ ++DG + + EA +L+
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 372 ALNKGLC---------------------TQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+L KG C + + + G CQ G ++ A EL ++M
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH 432
Query: 411 DVSPGARVWEALL 423
V P + LL
Sbjct: 433 GVLPDVMTYGILL 445
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +T++I+ ++V D + + + G+ + V Y++++ G AEELF
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G++PDV TY + ++GLC +E +++ +++ ++ Y T+++ +CK
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L + KG+ N+ TY++MI GL KG + EA LL + G ++
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGA 416
I + G + + +L+++M S A
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADA 578
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 2/235 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A +L+ M+ + D T + ++ C + + D+ + + + K G V
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV--DDGMKVFRNISKRGLVANAV 404
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +++ + K+ A + +M S G+ PD++ Y ++L+G+ KA E+F++L
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + Y I G+CK VE + + G KP+V+TY ++ LCK L
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ L+++M+ G N TY+ +I GD+ + L+EE + G +S
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 101/219 (46%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G V + +RS + K DA+ + +M P +V ++ + + + + +
Sbjct: 52 GNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+L + G+ ++YT N+ IN C+ ++ + +LG +PD T+NTL+ LC
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 171
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++++ LV M G ++ TY+ +++G+ GD A +L + + + +
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTY 231
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC+ G + A+ L K+M K + + +L+
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 139/276 (50%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RVG A+ +L+ M+ T +++L +VC+ + + + EM+ G +V
Sbjct: 151 GRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFG--QAMKVLDEMRAKGCTPNIV 208
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + ++++V DA ILN++ S G +PD V YT VL G+ + + E LF E+
Sbjct: 209 TYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEM 268
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ VP+ T+++ + C+ VE I+++ M E G + N ++ ++CK +
Sbjct: 269 VENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRV 328
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ E + M G + +Y+ ++ GL G +A LL E + K F+
Sbjct: 329 DDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTF 388
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
IC LCQ+GL+ +A+ L++QM + S G + AL+
Sbjct: 389 ICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALV 424
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +IR L + +V DAL +L+ M +P +V YT++L V + +A ++ DE+
Sbjct: 140 YTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMR 199
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P++ TYNV ING+C+++ V+ +++ + G +PD ++Y T+L+ LC +
Sbjct: 200 AKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 259
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ L EM V N T+ +++ G + A +L+ G +++ + I
Sbjct: 260 DVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVI 319
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+C++G V A E L M SP + +L
Sbjct: 320 NSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVL 354
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 164/377 (43%), Gaps = 27/377 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIK 124
SLL C+P Y +++ + ++S F VLD E R TP + + +I
Sbjct: 158 SLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLD--EMRAKGCTPNIVTYNVIIN 215
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGFA--------------IEILNCMINDGFCVD 168
R D+ + ++ F+ + V + +E+L C + + CV
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVP 275
Query: 169 GK-TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN-VIRSLVKKEKVFDAL 226
+ T +++ C R + + + M + G C N VI S+ K+ +V DA
Sbjct: 276 NEVTFDMLVRFFC--RGGMVERAIEVLDRMSEHG-CTANTTLCNIVINSICKQGRVDDAF 332
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
LN M S G PD + YT VL G+ + A+EL +E++ P+ T+N +I L
Sbjct: 333 EFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICIL 392
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C++ ++ I +I M E G ++TYN L+ C ++ EL + + N
Sbjct: 393 CQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEP---NT 449
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ ++ GL + A LL E + F+ + CQ+G V +A+EL++Q
Sbjct: 450 ITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQ 509
Query: 407 MADKDVSPGARVWEALL 423
M + +P + LL
Sbjct: 510 MMEHGCTPNLITFNTLL 526
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 160/338 (47%), Gaps = 27/338 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ Y C P +Y V+K L ++ D +L+ + R+N E F I
Sbjct: 334 FLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEM-VRKNCPPNEVTFNTFICIL 392
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------- 170
++ L ++P++ + I N ++N GFCV G+
Sbjct: 393 CQKGLIDQAILLIEQMPEYGCS---VGIVTYNALVN-GFCVQGRVDSALELFNSLPCEPN 448
Query: 171 --TCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
T + +L+ +C L ++ ELL EM + +V + ++ +K V +A+
Sbjct: 449 TITYTTLLTGLCHAERLDAAAELLA---EMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIE 505
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++ QM G P+++ + +L+G+ + +A EL L+ G+ D TY+ ++ L
Sbjct: 506 LVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLS 565
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+++ +E ++M ++++G +P + YN +L ALCK E +R + M + N
Sbjct: 566 REDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNES 625
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
TY I+I+GLA +G + EA +L E ++G+ ++S + D
Sbjct: 626 TYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLIED 663
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 135/278 (48%), Gaps = 5/278 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R A E+LN M+ + T + + +C++ + D+ + +++M + G G
Sbjct: 359 RAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLI--DQAILLIEQMPEYGCSVG 416
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ + +V AL + N + + P+ + YT +L G+ E A EL
Sbjct: 417 IVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLA 473
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ +V T+NV ++ C++ VE I+++ M E G P++IT+NTLL + +
Sbjct: 474 EMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDC 533
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
EL+ + KGI L+ TYS ++D L+ + I EA + + G+ ++ M++
Sbjct: 534 NSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYN 593
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + LC+R +A++ M P + L+
Sbjct: 594 KILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILI 631
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 39/263 (14%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +IR+L ++ + DA +L + G D+ Y ++ G A L + V
Sbjct: 74 TKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPV 133
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
PD YTY I GLC + V + ++ M +P V+TY LL+A+CK +
Sbjct: 134 ---PPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQ 190
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE--------------ALNK 375
+++ EM+ KG N+ TY+++I+G+ + + +A +L + K
Sbjct: 191 AMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLK 250
Query: 376 GLCTQSS---------------------MFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GLC FD + C+ G+V +A+E+L +M++ +
Sbjct: 251 GLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTA 310
Query: 415 GARVWEALLLSSVSKLDFVNTSF 437
+ ++++S+ K V+ +F
Sbjct: 311 NTTLCN-IVINSICKQGRVDDAF 332
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L +I ++D +A L + G PDVY I LC++ +++ E G+
Sbjct: 42 LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
DV YNTL+ C+ L+ R L+ M + + TY+ +I GL +G + +A
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALS 158
Query: 368 LLEEALNKGLCTQSSMFDETIC--GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL++ L + Q S+ T+ +C+ +A+++L +M K +P + ++
Sbjct: 159 LLDDMLRRE--CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVII 214
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 11/249 (4%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
E+L ++ G VDG C+ R+L + L FV M K G + Y +I
Sbjct: 333 ELLPNVVVFGTLVDG---------FCKARELVAARSL-FVH-MVKFGVDPNLYVYNCLIH 381
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
K + +A+G+L++M+S + PD+ YT+++NG+ +E +A LF + + P
Sbjct: 382 GQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFP 441
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
TYN I+G CK+ N+E + + + M G +P++IT++TL+ CKVR + L
Sbjct: 442 SSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLY 501
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
EM KGIV ++ TY+ +ID + ++ EA L + L G+ F + G +
Sbjct: 502 FEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE 561
Query: 395 GLVRKALEL 403
G + A++
Sbjct: 562 GRLSDAIDF 570
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI+ G D S++ +Q S E L + EM LG + YT IR L ++
Sbjct: 224 MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKL--LDEMTSLGVKPNVYIYTIYIRDLCRE 281
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A + MK G+ P++ Y+ +++G + +A L+ E+LV L+P+V +
Sbjct: 282 NKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVF 341
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
++G CK + A + M + G P++ YN L+ CK + L+ EM+
Sbjct: 342 GTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMES 401
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ ++ TY+I+I+GL ++ + EA L + N+ + S ++ I G C+ + K
Sbjct: 402 LNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEK 461
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL+L +M V P + L+
Sbjct: 462 ALDLCSEMTSSGVEPNIITFSTLI 485
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 121/235 (51%), Gaps = 4/235 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQ-MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ LV++ + FD++ + Q M S G+ PD+ Y+++ Q K E+L DE+ L
Sbjct: 204 ILNGLVRRRR-FDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSL 262
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ P+VY Y +YI LC++N +E KM M+ G P++ TY+ ++ CK L +
Sbjct: 263 GVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQA 322
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L KE+ ++ N+ + ++DG +++ A L + G+ +++ I G
Sbjct: 323 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHG 382
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
C+ G + +A+ LL +M ++SP + L+ L + +L N F R+ ++
Sbjct: 383 QCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNE 437
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++ + +C + + E + + MK G + Y+ +I K + A G+ ++
Sbjct: 272 TIYIRDLCRENKMEEAEKM--FELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEI 329
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ P++V + +++G + V A LF ++ G+ P++Y YN I+G CK N+
Sbjct: 330 LVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNM 389
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ +++ ME L PDV TY L+ LC L L + MK + I + TY+ +
Sbjct: 390 LEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSL 449
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G + +I +A L E + G+ F I G C+ ++ A+ L +M K +
Sbjct: 450 IHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGI 509
Query: 413 SPGARVWEALL 423
P + L+
Sbjct: 510 VPDVVTYTTLI 520
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R N++ A ++ M G + T S ++ C+ +L + G +E+
Sbjct: 280 RENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLR--QAYGLYKEILVAELLPN 337
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ K ++ A + M G+ P++ Y +++G + ++A L
Sbjct: 338 VVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLS 397
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ L L PDV+TY + INGLC + + ++ M+ P +TYN+L+ CK
Sbjct: 398 EMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEY 457
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + +L EM G+ N+ T+S +IDG +I A GL E KG+ +
Sbjct: 458 NIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYT 517
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + +++AL L M + + P + L+
Sbjct: 518 TLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 555
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 5/237 (2%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S L +++++ F G+ ++ +I ++ DAL + +M+ PD
Sbjct: 149 SHRLFNALEDIQSPKFSIGV--FSLLIMEFLEMGLFEDALWVSREMRCS---PDSKACLA 203
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+LNG++ + + + ++ GLVPDV+ Y+V KQ K++ M LG
Sbjct: 204 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLG 263
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KP+V Y ++ LC+ ++ ++ + MK G+V NL TYS MIDG G++ +A
Sbjct: 264 VKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAY 323
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL +E L L +F + G C+ + A L M V P V+ L+
Sbjct: 324 GLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLI 380
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/338 (18%), Positives = 123/338 (36%), Gaps = 64/338 (18%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
+ +P Y+ +I ++ + +L +E N F + LI R
Sbjct: 367 FGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESL-NLSPDVFTYTILINGLCTEERLA 425
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++ LF ++ RI F + + GFC ++ + ++ L
Sbjct: 426 EANRLFQRMKNERI----FPSSVTYNSLIHGFC----------------KEYNIEKALDL 465
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
EM G ++ ++ +I K + A+G+ +M GI PD+V YT +++
Sbjct: 466 CSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFK 525
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTY---------------------------------- 279
+ + +A L+ ++L G+ P+ +T+
Sbjct: 526 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQ 585
Query: 280 ---------NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
I GLC+ + + + M+ G PD+ +Y ++L+A + + +
Sbjct: 586 RSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDT 645
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
L +M GI+ NL ++ G + AC L
Sbjct: 646 MMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSACFL 683
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
C+ V +T +I L + + A + MKS G+ PDI Y +L + ++
Sbjct: 588 CWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMM 647
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
L +++ G++P N+ +N L E G AC S+ I NT
Sbjct: 648 LHCDMIKTGILP-----NLMVNQLLAMFYQENGYLRSACFLTNSSRLGTIFKNT 696
>gi|357135887|ref|XP_003569539.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Brachypodium distachyon]
Length = 476
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 157/369 (42%), Gaps = 38/369 (10%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDH----IEKRENFETPEFIFIDLIKTYADAHRFQ 133
P P+ + LA +S+L + E P F+ L++ ++ HR
Sbjct: 51 PSPDTVSLLTSRLASAGLLPLATSLLSRSRALFPSAADLEPP---FLTLLRAFSRTHRPL 107
Query: 134 DSVNLFYKIPK------------------FRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
++ LF P + + A +L M GF T +++
Sbjct: 108 AALQLFRSAPSALALPHSARSYTAVLATLVSHSHLPLAHSLLADMRAGGFAPTTATYNVL 167
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L + C ++ + + + K C Y VI L ++ + DA I ++M ++
Sbjct: 168 LKAHCSDASAPIEDAVRLFRNIPKPDAC----SYNTVIDGLCRRSRRADAQEIFSEMVAN 223
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ P +V YT V+N + A ++FDE+ +G+ P+V TY+ I+GLCK +
Sbjct: 224 GVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGGRAASA 283
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++++ M + P+ ITY++++ LCK LN E++ M+ +G + + +I G
Sbjct: 284 LELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFGKLIVG 343
Query: 356 LASKGDIIEACGLLEEALNKGL-------CTQSSMFDETICGLCQRGLVRKALELLKQMA 408
L G +EA L+E + G+ + D + LC +G + + + M
Sbjct: 344 LCGAGRAVEAANYLDEMVLSGVEPNRVTWSLHVRINDAVVTALCAKGEAGRTFRVYQSMR 403
Query: 409 DKDVS--PG 415
+ +S PG
Sbjct: 404 TRGISTEPG 412
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 154/344 (44%), Gaps = 25/344 (7%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY-ADAHR-FQDSVNL 138
+Y V+ TL +S S+L + + F + L+K + +DA +D+V L
Sbjct: 127 RSYTAVLATLVSHSHLPLAHSLLADM-RAGGFAPTTATYNVLLKAHCSDASAPIEDAVRL 185
Query: 139 FYKIPKF-------------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
F IPK R +R A EI + M+ +G T + +++ + RD
Sbjct: 186 FRNIPKPDACSYNTVIDGLCRRSRRADAQEIFSEMVANGVAPTVVTYTTVINWLA--RDG 243
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D+ L EM ++G +V Y+++I L K + AL +L++M + P+ + Y+
Sbjct: 244 CLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGGRAASALELLDRMAKEAKLPNTITYS 303
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
V+NG+ ++ +A E+ D + + G PD + I GLC + M
Sbjct: 304 SVINGLCKEDRLNEAMEVLDRMRLQGRKPDAGLFGKLIVGLCGAGRAVEAANYLDEMVLS 363
Query: 306 GSKPDVITY-------NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
G +P+ +T+ + ++ ALC E R + + M+ +GI T+ ++++ +
Sbjct: 364 GVEPNRVTWSLHVRINDAVVTALCAKGEAGRTFRVYQSMRTRGISTEPGTFHLLVEFFSK 423
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
K D+ +A ++ + L++ + +D + + VR+ E
Sbjct: 424 KNDLEKAAHVVLDMLSEKCIPERETWDIILTRYWSKKKVRQEAE 467
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 14/248 (5%)
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
R L++ +L F L YT V+ +LV + A +L M++ G P
Sbjct: 104 HRPLAALQL--FRSAPSALALPHSARSYTAVLATLVSHSHLPLAHSLLADMRAGGFAPTT 161
Query: 242 VCYTMVL-----NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
Y ++L + ED V+ LF + PD +YN I+GLC+++
Sbjct: 162 ATYNVLLKAHCSDASAPIEDAVR---LFRNIPK----PDACSYNTVIDGLCRRSRRADAQ 214
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ + M G P V+TY T++ L + L+ ++ EM GI N+ TYS +IDGL
Sbjct: 215 EIFSEMVANGVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGL 274
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G A LL+ + + + I GLC+ + +A+E+L +M + P A
Sbjct: 275 CKGGRAASALELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQGRKPDA 334
Query: 417 RVWEALLL 424
++ L++
Sbjct: 335 GLFGKLIV 342
>gi|357129487|ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Brachypodium distachyon]
Length = 837
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 14/282 (4%)
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+LFY I R A+++L M +G K C+ ++ +C ++ E L F+ E
Sbjct: 515 SLFYGI--CRRKDPNCALDLLRDMRTNGHRPWIKNCTEMVQQLCISGRIT--EALQFLDE 570
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M K+GF +V Y+ + L K +V +ALGI + S PD+V + +++NG +
Sbjct: 571 MLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSKYYLPDVVAHNILINGFRISGK 630
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL---GSKPDVIT 313
+A+E+ +E+L GL P + TYN+ I+ CK N+E K IAC+ ++ P V+T
Sbjct: 631 LSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNIE---KAIACLNKMIDEEESPTVVT 687
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y +L+ LC + L +M KG N Y+ ++GL + + A EE +
Sbjct: 688 YTSLIDGLCSTGRPDEAIALWHKMMDKGCAPNKIAYTAFVNGLCKRARVDTALTYYEEMM 747
Query: 374 NKG--LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
KG L T S ++ I L G K ELLK++ KD++
Sbjct: 748 TKGFELDTFSCLY--FINFLISTGNATKGCELLKEVLQKDIT 787
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 116/236 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE MK LG Y ++ + +++ AL +L M+++G +P I T +
Sbjct: 492 DEGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEM 551
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ + + +A + DE+L +G +PD+ TY+ +NGLCK V+ + + +
Sbjct: 552 VQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSKYY 611
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PDV+ +N L+ +L+ +E+++EM KG+ ++ TY++MID G+I +A
Sbjct: 612 LPDVVAHNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNIEKAIA 671
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + +++ + I GLC G +A+ L +M DK +P + A +
Sbjct: 672 CLNKMIDEEESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDKGCAPNKIAYTAFV 727
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 135/273 (49%), Gaps = 4/273 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ +C+ + L D L +++M +G ++ + ++I L +++ + + N M
Sbjct: 444 NIVVCGLCKVKKL--DNALALIKDMTGIGCKGKLLMFNDLIHELCSLDRLDEGYKMFNLM 501
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K+ G+ P Y + G+ ++D A +L ++ G P + + LC +
Sbjct: 502 KNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMVQQLCISGRI 561
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
++ + M ++G PD++TY+ + LCK E++ + +++ K + ++ ++I+
Sbjct: 562 TEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSKYYLPDVVAHNIL 621
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G G + EA ++EE L KGL ++ I C+ G + KA+ L +M D++
Sbjct: 622 INGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDVWCKSGNIEKAIACLNKMIDEEE 681
Query: 413 SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
SP + +L+ L S + D + +++D+
Sbjct: 682 SPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDK 714
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%)
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
S+ +KP+ + +V+ G+ + A L ++ +G + +N I+ LC + ++
Sbjct: 433 SEDVKPNSDSFNIVVCGLCKVKKLDNALALIKDMTGIGCKGKLLMFNDLIHELCSLDRLD 492
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G KM M+ LG P TYN+L +C+ ++ N +L+++M+ G ++ + M+
Sbjct: 493 EGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMV 552
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L G I EA L+E L G + + GLC+ G V AL + + ++ K
Sbjct: 553 QQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSKYYL 612
Query: 414 P 414
P
Sbjct: 613 P 613
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 29/264 (10%)
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
VD T + +L C D+ G + M + G+ V T + + K KV A+
Sbjct: 209 VDKYTLTSLLQCYCNAG--RPDDANGVFERMSQRGWVDEHV-LTILAVAFSKWGKVDGAV 265
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+L +M+ G++P +++++G Q KA E+FD++ G V + Y+V I GL
Sbjct: 266 ELLGRMELLGMRPSEKTLSVLVHGFAKQLRLDKAMEMFDKMGSYGFVAGLPMYSVLIEGL 325
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN----RLRELVKEMKWKGI 342
C++ + +K+ M+ PD +L+A C+ + + E +++K G+
Sbjct: 326 CQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAFCREGDFAIAGLFINENARQLKPSGV 385
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG-------------------LCTQSSM 383
+ ++++++G + G A LL + G + S
Sbjct: 386 I---ALFNVVLEGFVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAHVVDISEDVKPNSDS 442
Query: 384 FDETICGLCQRGLVRKALELLKQM 407
F+ +CGLC+ + AL L+K M
Sbjct: 443 FNIVVCGLCKVKKLDNALALIKDM 466
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/395 (19%), Positives = 152/395 (38%), Gaps = 76/395 (19%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQ 133
+C P ++ ++ TLA+ + D + L + R E+ + + L++ Y +A R
Sbjct: 169 SCTPNSYTFNCLLDTLAKAGRADDAEARLQEMVVRCGDESVDKYTLTSLLQCYCNAGRPD 228
Query: 134 DSVNLFYKIPK----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
D+ +F ++ + + +V A+E+L M G KT S+++
Sbjct: 229 DANGVFERMSQRGWVDEHVLTILAVAFSKWGKVDGAVELLGRMELLGMRPSEKTLSVLVH 288
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+Q L D+ + +M GF G+ Y+ +I L +K+++ A+ + +MK +
Sbjct: 289 GFAKQ--LRLDKAMEMFDKMGSYGFVAGLPMYSVLIEGLCQKKEIGKAVKLFEEMKRGEV 346
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD--VYTYNVYINGLCKQNNVEAG 295
PD +L + D+ A LF L P + +NV + G EA
Sbjct: 347 APDARLLKKMLEAFCREGDFAIAG-LFINENARQLKPSGVIALFNVVLEGFVNHGQAEAA 405
Query: 296 IKMIACMEELGS-------------------KPDVITYNTLLQALCKVRELNRLRELVKE 336
+++ M G KP+ ++N ++ LCKV++L+ L+K+
Sbjct: 406 YQLLTSMIRGGQGISDGVTVGAHVVDISEDVKPNSDSFNIVVCGLCKVKKLDNALALIKD 465
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M G+ KG ++ MF++ I LC
Sbjct: 466 MT----------------GIGCKGKLL-------------------MFNDLIHELCSLDR 490
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+ + ++ M + + P + +L + D
Sbjct: 491 LDEGYKMFNLMKNLGLIPSEFTYNSLFYGICRRKD 525
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 36/174 (20%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +F+ + G V D + + K V+ ++++ ME LG +P T + L+
Sbjct: 230 ANGVFERMSQRGWV-DEHVLTILAVAFSKWGKVDGAVELLGRMELLGMRPSEKTLSVLVH 288
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
K L++ E+ +M G V L YS++I+GL
Sbjct: 289 GFAKQLRLDKAMEMFDKMGSYGFVAGLPMYSVLIEGL----------------------- 325
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
CQ+ + KA++L ++M +V+P AR+ + +L + + DF
Sbjct: 326 ------------CQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAFCREGDFA 367
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 168/371 (45%), Gaps = 28/371 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFY 140
Y+ ++K + + + ++ LD +E EN +P+ + + LI Y A
Sbjct: 390 TYNIILKWMCKKGNMTEATTTLDKME--ENGLSPDCVTYNTLIGAYCKA----------- 436
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
++G A +++ M + G +D T + IL +C ++ L DE + K
Sbjct: 437 -------GKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKL--DEAYNLLCSASKR 487
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G+ V Y +I K EK AL + ++MK I P + Y V+ G+ +A
Sbjct: 488 GYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQA 547
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ +E+L GLVPD TYN+ I+G C + NVE + M E KPDV T N LL+
Sbjct: 548 IDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRG 607
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LC+ L + +L + KG +++ TY+ +I L +G A LL E K L
Sbjct: 608 LCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPD 667
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV----WEALLLSSVSK-LDFVNT 435
+ I L G +++A E +M + + + + +L S VS+ DF +
Sbjct: 668 QYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSI 727
Query: 436 SFIRLVDQILN 446
++ ++++ N
Sbjct: 728 AYSDQINELCN 738
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 40/303 (13%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK---KLGF 202
++++ A +I N M + + TC+ +++S+ R SS +L Q +K KLG
Sbjct: 152 QMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLV--RYPSSSSILLARQVLKDSIKLGV 209
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ +I + KV DAL +N+M G PD V Y +L+ ++ + +A +
Sbjct: 210 VPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARD 269
Query: 263 LFDELLVLGLVPDV-----------------------------------YTYNVYINGLC 287
L ++ GL P+ +TYN+ +NG C
Sbjct: 270 LLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFC 329
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
++ ++ ME++ PDV+TYNTL+ + R+ + + L++EM KG+ N
Sbjct: 330 NDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAV 389
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I++ + KG++ EA L++ GL ++ I C+ G + KA ++ +M
Sbjct: 390 TYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEM 449
Query: 408 ADK 410
K
Sbjct: 450 TSK 452
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 23/285 (8%)
Query: 160 MINDGFCVDGK---------------------TCSLILSSVCEQRDLSSDELLGFVQEMK 198
M+ +GFC DGK T + ++ + RD S E+ ++EM
Sbjct: 323 MLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRD--SSEVYSLIEEMD 380
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
K G V Y +++ + KK + +A L++M+ +G+ PD V Y ++
Sbjct: 381 KKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMG 440
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
KA + DE+ GL D +T N ++ LC + ++ ++ + G D ++Y L+
Sbjct: 441 KAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILI 500
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
K + +R L EMK + I+ + TY+ +I GL + +A L E L GL
Sbjct: 501 LGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLV 560
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I G C G V KA + +M + P LL
Sbjct: 561 PDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILL 605
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ K+ +A I ++M+ + PD+V Y +++G D + L +E+
Sbjct: 321 YNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMD 380
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ + TYN+ + +CK+ N+ + MEE G PD +TYNTL+ A CK ++
Sbjct: 381 KKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMG 440
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ ++ EM KG+ ++ T + ++ L + + EA LL A +G + I
Sbjct: 441 KAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILI 500
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + +AL L +M ++ + P + +++
Sbjct: 501 LGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVI 535
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 25/234 (10%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V AI+ LN M+ +G D T ++I+ C + ++ ++ F EM + F +
Sbjct: 543 KVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNV--EKAFQFHNEMIENLFKPDVYT 600
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
++R L ++ + AL + N + S G D+V Y +++ + + + A +L E+
Sbjct: 601 CNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEME 660
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE----------LGSKPDVIT----- 313
L PD YTY V I L ++ + M E LG +V+T
Sbjct: 661 AKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSE 720
Query: 314 --------YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
Y+ + LC + L E+ +G+ LN TY +++GL +
Sbjct: 721 HFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKR 774
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 25/197 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + N MI + F D TC+++L +C + L ++ L + G +V Y +
Sbjct: 582 AFQFHNEMIENLFKPDVYTCNILLRGLCREGML--EKALKLFNTLVSKGKDIDVVTYNTI 639
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE---------- 262
I SL K+ K +A +L +M++ + PD Y +++ + +AEE
Sbjct: 640 ISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699
Query: 263 LFDELLVLGLVPDVYT-------------YNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
+ D+ L LG +V T Y+ IN LC Q+ + + + + + G
Sbjct: 700 VHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVAL 759
Query: 310 DVITYNTLLQALCKVRE 326
+ TY L++ L K R+
Sbjct: 760 NKYTYLNLMEGLIKRRK 776
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ K G +V Y ++ ++ + + + + M + G++PD+ Y++++NG+ +
Sbjct: 166 IAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESK 225
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A ELFDE+LV GL P+ T+ I+G CK V+ +++ M PD+ITYNT
Sbjct: 226 MDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNT 285
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK +L + +L+ EM KG+ + TY+ +IDG +GD+ A + + +
Sbjct: 286 LIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQEN 345
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + I GLCQ G A ++L++M + P + ++
Sbjct: 346 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMII 392
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI TY ++ +D++ Y++ + RV F TC +L
Sbjct: 71 YVFSGLITTYLESGFLRDAIEC-YRLTREHKLRVPF-----------------DTCKKVL 112
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF + G + ++ K + A + + + G
Sbjct: 113 EHLMKLKYFKL--VWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWG 170
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V Y ++NG I D + L +L G+ PDVYTY+V INGLCK++ ++
Sbjct: 171 LRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDAN 230
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M G P+ +T+ TL+ CK ++ E+ K+M + ++ +L TY+ +I GL
Sbjct: 231 ELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 290
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E KGL + I G C+ G + A E K+M +++
Sbjct: 291 CKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDD 350
Query: 417 RVWEALL 423
+ AL+
Sbjct: 351 VAYTALI 357
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA + ++M G+ P+ V +T +++G A E++ ++L
Sbjct: 213 YSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 272
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L+PD+ TYN I GLCK+ +++ +I M G K D ITY TL+ CK +L+
Sbjct: 273 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLD 332
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E L+ GL + + I
Sbjct: 333 AAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMII 392
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G V K +LLK M +P + L+
Sbjct: 393 NEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLM 427
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 187 RLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLVKGLXPN 244
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 245 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 304
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL D TY I+G CK+ +++A + M + + D + Y L+ LC+
Sbjct: 305 EMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEG 364
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ + LL++ G
Sbjct: 365 RSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNG 415
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M++ D T + ++ +C++ DL L + EM G +
Sbjct: 259 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL--IDEMSMKGLKXDKI 316
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + I+ D V YT +++G+ + V AE++ E+
Sbjct: 317 TYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 376
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L +GL PD TY + IN CK+ +V G K++ M+ G P V+TYN L+
Sbjct: 377 LSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%)
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+N+ ++ CK ++ + + + G +P V++YNTL+ ++ +LN L M
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G+ ++ TYS++I+GL + + +A L +E L KGL F I G C+ G V
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
A+E+ KQM + + P + L+ K D
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDL 296
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 142/273 (52%), Gaps = 2/273 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ MI++G KT S ++ ++ +RD + ++ ++EM+ LG + YT
Sbjct: 211 ALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGT--IMDLLEEMETLGLRPNIYTYTIC 268
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
IR L + ++ DA GIL M+ +G PD+V YT++++ + KA+EL+ ++
Sbjct: 269 IRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH 328
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ TY ++ ++E + + ME G PDV+TY L++ALCK ++++ +
Sbjct: 329 KPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFD 388
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ M+ +GIV NL TY+ +I GL + + EA L + G+ + + I
Sbjct: 389 MLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYG 448
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G KAL+ ++M + + P A L S
Sbjct: 449 KLGDPEKALDTFEKMKKRGIMPSIAACNASLYS 481
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 116/238 (48%), Gaps = 2/238 (0%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M++ GF Y +I L++ +AL + +M S+G+KP + Y+ ++ + +
Sbjct: 182 KMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRR 241
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
D +L +E+ LGL P++YTY + I L + ++ ++ ME+ G PDV+TY
Sbjct: 242 DTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYT 301
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ ALC +L++ +EL +M+ +L TY ++ + GD+ E
Sbjct: 302 VLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEAD 361
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
G + + LC+ G V +A ++L M + + P + L+ L ++ +LD
Sbjct: 362 GYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLD 419
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 116/238 (48%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
++ L EMK G C + Y ++ + K +++ + + N+M G KP+I+ + +
Sbjct: 804 TEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNI 863
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ ++ KA +L+ E++ P TY I GL K E +K+ M +
Sbjct: 864 IISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQ 923
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KP+ YN L+ K +N +L K M +GI +L++Y+I+++ L G + +A
Sbjct: 924 CKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAV 983
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
EE GL + ++ I GL + + +AL L +M ++ +SP + AL+L
Sbjct: 984 HYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALIL 1041
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 127/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ M N G C + T +L+L + + + + DEL EM G ++ + +
Sbjct: 807 ALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRI--DELFELYNEMLCRGCKPNIITHNII 864
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +LVK + AL + ++ S P Y ++ G++ +A ++F+E+
Sbjct: 865 ISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQC 924
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ YN+ ING K NV + M + G +PD+ +Y L++ L ++
Sbjct: 925 KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVH 984
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+E+K G+ + +Y++MI+GL + EA L E N+G+ + ++ I
Sbjct: 985 YFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFG 1044
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+V +A ++ +++ + P + AL+
Sbjct: 1045 NAGMVDQAGKMFEELQFMGLEPNVFTYNALI 1075
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 152/344 (44%), Gaps = 29/344 (8%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
PE +++++ L + + D++ V D ++K+ P ++ + K + + +
Sbjct: 122 PETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPN-TYLTIFKALSIKGGIRQAP--- 177
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
+ + K R + GF + + + +G L+ C+ E L + M
Sbjct: 178 FALGKMR--QAGFVL--------NAYSYNGLIYFLLQPGFCK-------EALKVYKRMIS 220
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL----NGVIVQE 255
G M Y+ ++ +L ++ + +L +M++ G++P+I YT+ + + +
Sbjct: 221 EGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDD 280
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
Y + + DE G PDV TY V I+ LC ++ ++ M KPD++TY
Sbjct: 281 AYGILKTMEDE----GCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYI 336
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ +L ++ EM+ G ++ TY+I+++ L G + +A +L+ +
Sbjct: 337 TLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVR 396
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
G+ ++ I GL + +ALEL M V+P A +
Sbjct: 397 GIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSY 440
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 116/231 (50%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F EM+ G+ +V YT ++ +L K KV A +L+ M+ GI P++ Y +++G++
Sbjct: 354 FWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLL 413
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A ELF+ + LG+ P Y+Y ++I+ K + E + M++ G P +
Sbjct: 414 NLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIA 473
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
N L +L ++ + +++ ++ G+ + TY++M+ + G I +A LL E
Sbjct: 474 ACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEM 533
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L++G + + I L + G V +A ++ ++ D ++P + L+
Sbjct: 534 LSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILI 584
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A ++L+ M G + T + ++S + R L DE L M+ LG
Sbjct: 381 GKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRL--DEALELFNNMESLGVAPTAY 438
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y I K AL +MK GI P I L + +A+++F+++
Sbjct: 439 SYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDI 498
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GL PD TYN+ + K ++ K++ M G +PD+I N+L+ L K +
Sbjct: 499 HNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRV 558
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++ +K + + TY+I+I GL +G +++A L G + F+
Sbjct: 559 DEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNAL 618
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ LC+ V AL++ +M + SP + ++
Sbjct: 619 LDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII 654
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 120/264 (45%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M DG+ D T ++++ ++C+ + D+ + M+ G + Y +I L+
Sbjct: 358 MEADGYAPDVVTYTILVEALCKSGKV--DQAFDMLDVMRVRGIVPNLHTYNTLISGLLNL 415
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ +AL + N M+S G+ P Y + ++ D KA + F+++ G++P +
Sbjct: 416 RRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAAC 475
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + L + + + + G PD +TYN +++ K ++++ +L+ EM
Sbjct: 476 NASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLS 535
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G ++ + +ID L G + EA + + L ++ I GL + G + K
Sbjct: 536 EGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLK 595
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL+L M + P + ALL
Sbjct: 596 ALDLFGSMKESGCPPNTVTFNALL 619
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 2/274 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ E+ N M+ G + T ++I+S++ + S ++ L E+ F
Sbjct: 838 RIDELFELYNEMLCRGCKPNIITHNIIISALVKSN--SINKALDLYYEIISGDFSPTPCT 895
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L+K + +A+ I +M KP+ Y +++NG + A +LF ++
Sbjct: 896 YGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMI 955
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ PD+ +Y + + L V+ + ++ G PD ++YN ++ L K R L
Sbjct: 956 KEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLE 1015
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L EMK +GI L TY+ +I + G + +A + EE GL ++ I
Sbjct: 1016 EALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALI 1075
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
G + G +A + K+M SP A + L
Sbjct: 1076 RGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 5/194 (2%)
Query: 254 QEDYVKAEELFDELL-VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
Q+ + A++LFD+ LG P +YN ++GL N EA +K+ M+ G P++
Sbjct: 765 QKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIF 824
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYN LL A K + ++ L EL EM +G N+ T++I+I L I +A L E
Sbjct: 825 TYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEI 884
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
++ + I GL + G +A+++ ++M D P ++ +L++ K
Sbjct: 885 ISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYN-ILINGFGKAGN 943
Query: 433 VNTS---FIRLVDQ 443
VN + F R++ +
Sbjct: 944 VNIACDLFKRMIKE 957
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+IR L K++K DA + ++ KS G P Y +++G++ A +LF E+
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G P+++TYN+ ++ K ++ ++ M G KP++IT+N ++ AL K +N+
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L E+ TY +I GL G EA + EE + ++++ I G
Sbjct: 878 LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V A +L K+M + + P + + L+
Sbjct: 938 FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILV 970
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 31/288 (10%)
Query: 71 FSIYN------CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEK--RENFETPEFIFIDL 122
F +YN C+P ++ +I L +++ I+ LD + +F + L
Sbjct: 843 FELYNEMLCRGCKPNIITHNIIISALVKSNS---INKALDLYYEIISGDFSPTPCTYGPL 899
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
I A R ++++ +F ++P ++ I N +IN GF G ++ C+
Sbjct: 900 IGGLLKAGRSEEAMKIFEEMPDYQCKP---NCAIYNILIN-GFGKAGN-----VNIACD- 949
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
+ M K G + YT ++ L +V DA+ ++K G+ PD V
Sbjct: 950 ----------LFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTV 999
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++NG+ +A LF E+ G+ P++YTYN I V+ KM +
Sbjct: 1000 SYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEEL 1059
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ +G +P+V TYN L++ K +R + K+M G N T++
Sbjct: 1060 QFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFA 1107
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 6/224 (2%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE +K L +V Y +I L K+ K+ AL + MK G P+ V + +
Sbjct: 559 DEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNAL 618
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+ + + A ++F + ++ PDV TYN I GL K+ M++ S
Sbjct: 619 LDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLS 678
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKE-MKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD +T TLL + K + ++V E + G+ + Q + +++ + + +I EA
Sbjct: 679 -PDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAI 737
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
E + +C ++ I LC++ +KAL+ K++ DK
Sbjct: 738 SFAEGLVCNSICQDDNLILPLIRVLCKQ---KKALD-AKKLFDK 777
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 280 NVYINGLCKQNNVEAGIK----MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
N Y+ + K +++ GI+ + M + G + +YN L+ L + ++ K
Sbjct: 158 NTYLT-IFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYK 216
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC--GLCQ 393
M +G+ +++TYS ++ L + D LLEE GL + +++ TIC L +
Sbjct: 217 RMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGL--RPNIYTYTICIRVLGR 274
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
G + A +LK M D+ P + L+ L + KLD
Sbjct: 275 AGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLD 314
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 5/273 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
A E++N MI F + + I++ +C+ Q + + L ++E + + G Y
Sbjct: 538 AWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR---YSMGCTSYN 594
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++I K+ A+ +M +GI P++V +T ++NG A E+ E+
Sbjct: 595 SIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSK 654
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
L DV Y I+G CK+N+++ + + + ELG P+V YN L+ + +++
Sbjct: 655 DLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAA 714
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L K+M GI +L TY+ MIDGL G++I A L E L G+ ++ + G
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNG 774
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L ++G +A ++L++M KD +P ++ ++
Sbjct: 775 LSKKGQFVRASKMLEEMKKKDATPNVLIYSTVI 807
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 142/319 (44%), Gaps = 19/319 (5%)
Query: 111 NFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK 170
NFE E I+ +I + + + + K + R N +I DGF +G
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK--RYSMGCTSYNSII-DGFFKEGD 605
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T D + +EM + G +V +T++I K ++ AL +++
Sbjct: 606 T----------------DSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIH 649
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MKS +K D+ Y +++G + D A LF ELL LGL+P+V YN I+G
Sbjct: 650 EMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLG 709
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++A I + M G D+ TY T++ L K L +L E+ GIV + Y
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYV 769
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++++GL+ KG + A +LEE K ++ I G + G + +A + +M +K
Sbjct: 770 VLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEK 829
Query: 411 DVSPGARVWEALLLSSVSK 429
+ ++ L+ V K
Sbjct: 830 GLVHDDTIFNLLVSGRVEK 848
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ + M+ G + + +++ C +L + L F M++ G V ++ +
Sbjct: 329 AVKVKDEMVGFGIPMSVIAATSLITGFCNGNELG--KALDFFNRMEEEGLAPDKVMFSVM 386
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K ++ A+ I +MKS GI P V ++ G + E A E+F++ +
Sbjct: 387 IEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWI 446
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+++ LCKQ V+A + ME G +P+V+ YN ++ A C+++ ++ R
Sbjct: 447 AHGFMCNKIFL-LLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARS 505
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM KG+ N TYSI+IDG D A ++ + + +++ I GLC
Sbjct: 506 IFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLC 565
Query: 393 QRGLVRKALELLKQM-ADKDVSPGARVWEALL 423
+ G KA E+L+ + +K S G + +++
Sbjct: 566 KVGQTSKAKEMLQNLIKEKRYSMGCTSYNSII 597
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
V K+ F + ++ + ++ ++ A+ N M + P + VL+ ++
Sbjct: 156 LVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLV 215
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A+E++++++++G+ D T + + ++ E +K+ + G++PD +
Sbjct: 216 RSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGL 275
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIV-LNLQTYSIMIDGLASKGDIIEACGLLEE 371
++ +QA CK+++L +L++EM+ KG V + +TY+ +I +G++ EA + +E
Sbjct: 276 LFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDE 335
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+ I G C + KAL+ +M ++ ++P ++ ++
Sbjct: 336 MVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMI 387
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 118/272 (43%), Gaps = 4/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLGFCFGMVDYTN 211
A++I +++ G DG SL + + C+ +DL L ++EM+ K G YT+
Sbjct: 258 AMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVM--ALDLLREMREKGGVPASQETYTS 315
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI + VK+ + +A+ + ++M GI ++ T ++ G + KA + F+ + G
Sbjct: 316 VIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEG 375
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L PD ++V I CK +E +++ M+ +G P + + ++Q K
Sbjct: 376 LAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAAL 435
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E+ + I I + L +G + A L NKG+ ++ +
Sbjct: 436 EIFNDSFETWIAHGFMCNKIFL-LLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAH 494
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ + A + +M +K + P + L+
Sbjct: 495 CRMKNMDLARSIFSEMLEKGLQPNNFTYSILI 526
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 142 IPKFR-INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL--SSDELLGFVQEMK 198
I FR + ++ AI++ M+NDG D T + ++ + + +L +SD E+
Sbjct: 702 ISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASD----LYSELL 757
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
LG + Y ++ L KK + A +L +MK P+++ Y+ V+ G + +
Sbjct: 758 ALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLN 817
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+A + DE+L GLV D +N+ ++G ++ A I +A E
Sbjct: 818 EAFRVHDEMLEKGLVHDDTIFNLLVSGRVEKPPAAAKISSLASPE 862
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 6/245 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + A E + M+++G +D + + V E + + +EM GF
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRI--VGELKLGDTSRAFSLQEEMLAKGFPPD 513
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y V+ L K + +A +L +M SDG+ PD V YT +++ + K E+F
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GL P V TY V I+G + +E + M+E G P+VITYN+L+ LCKVR
Sbjct: 574 EMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVR 633
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL----CTQS 381
+++ EM KGI N +Y+I+I+ + G+ EA L ++ L++G+ CT S
Sbjct: 634 RMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHS 693
Query: 382 SMFDE 386
++ +
Sbjct: 694 ALLKQ 698
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E L +EM G + Y + I L K ++ DA+ L+ M ++ + PD+V Y ++
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLI 381
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G + +KA LFDEL + L P + TYN ++GLC+Q +E ++ M G
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD++TY L+ CK+ L+ +E EM +G+ L+ Y+ I G GD A L
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
EE L KG +++ + GLC+ G + +A ELL++M V P
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIP 547
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 172/409 (42%), Gaps = 55/409 (13%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL C P Y+ +I L++ +F ++ + K + + + LI Y
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLK-TGLKVSAYTYNPLIYGY 314
Query: 127 ------ADAHRFQDSVNLFYKIPKF-----------RINRVGFAIEILNCMINDGFCVDG 169
A+A Q+ + L P ++ R+ A++ L+ M+ + D
Sbjct: 315 FNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDV 374
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+ + ++ C +L LL E++ + +V Y ++ L ++ ++ A +
Sbjct: 375 VSYNTLIYGYCRLGNLMKAFLL--FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD------------------------ 265
+M ++GI PDIV YT+++NG A+E FD
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492
Query: 266 -----------ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
E+L G PD+ YNV ++GLCK N+E +++ M G PD +TY
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+++ A + L + RE+ EM KG+ ++ TY+++I G A KG + A E
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KG+ ++ I GLC+ + +A +M +K + P + L+
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 2/267 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V +++L+ M G + T +++++ + ++ + ++ G + EM K G
Sbjct: 248 GKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEF--EQAKGLIGEMLKTGLKVSAY 305
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I K + +AL + +M G P + Y + G+ A + ++
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L L+PDV +YN I G C+ N+ + + + P ++TYNTLL LC+ EL
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++L EM +GI ++ TY+I+++G G + A +E L++GL S +
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I G + G +A L ++M K P
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPP 512
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 132/261 (50%), Gaps = 2/261 (0%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
+ + + MI D K C+ IL + +DL S + + + M + G +V Y ++
Sbjct: 184 LSVFDKMIKSRLSPDVKNCNRILR-ILRDKDLMSKAVEVY-RTMGEFGIKPTIVTYNTLL 241
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
S K KV L +L++M+ G P+ V Y +++NG+ + ++ +A+ L E+L GL
Sbjct: 242 DSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLK 301
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
YTYN I G + + + + M G+ P V TYN+ + LCK+ ++ +
Sbjct: 302 VSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQ 361
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ +M ++ ++ +Y+ +I G G++++A L +E + L ++ + GLC+
Sbjct: 362 LSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR 421
Query: 394 RGLVRKALELLKQMADKDVSP 414
+G + A +L +M ++ ++P
Sbjct: 422 QGELEVAQQLKVEMINEGIAP 442
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%)
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
KK V L + ++M + PD+ +L + ++ KA E++ + G+ P +
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYN ++ CK V+ G+ +++ M+ G P+ +TYN L+ L K E + + L+ EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
G+ ++ TY+ +I G +KG + EA L EE + KG + ++ I GLC+ G +
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
A++ L M ++ P + L+
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLI 381
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 132/319 (41%), Gaps = 10/319 (3%)
Query: 107 EKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFC 166
E + F EF+F +++ A + + + + ++ ++R I++ +I G C
Sbjct: 106 ESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR------IVDVLI--GGC 157
Query: 167 VDGKTCSLILSSVCEQRDLSS--DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
V + IL + S ++ L +M K + + ++R L K+ +
Sbjct: 158 VSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSK 217
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A+ + M GIKP IV Y +L+ + +L E+ G P+ TYNV IN
Sbjct: 218 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GL K+ E +I M + G K TYN L+ L L +EM KG
Sbjct: 278 GLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASP 337
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ TY+ I GL G + +A L + L L ++ I G C+ G + KA L
Sbjct: 338 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397
Query: 405 KQMADKDVSPGARVWEALL 423
++ + P + LL
Sbjct: 398 DELRSIYLFPTIVTYNTLL 416
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ + ++ A + M+ GF D ++++ +C+ +L +E +Q+M G
Sbjct: 487 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL--EEASELLQKMVSDG 544
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
V YT++I + ++ ++ I +M S G+ P +V YT++++G + +A
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
F E+ G++P+V TYN INGLCK ++ A M E G P+ +Y L+
Sbjct: 605 IYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINEN 664
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
C + L K+M +G+ + T+S ++ L
Sbjct: 665 CNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLG 700
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 4/245 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M++DG D T + I+ + E L + + EM G +V YT +
Sbjct: 533 ASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY--EMLSKGLTPSVVTYTVL 590
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K ++ A ++M+ GI P+++ Y ++NG+ +A F E++ G+
Sbjct: 591 IHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ Y+Y + IN C N + + + M + G +PD T++ LL+ L K +L +
Sbjct: 651 FPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVHG 710
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
M + L QT L S I E + +E L + + T+ D GL
Sbjct: 711 -TSTMPTAKVDLLSQTVGAAT-ALTSVSSIAENGHITKEQLRQNIPTKKQFVDPYRQGLI 768
Query: 393 QRGLV 397
G V
Sbjct: 769 VEGGV 773
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 169/366 (46%), Gaps = 22/366 (6%)
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFYKIPK 144
++K L +S S V + + N P F +F L + + + F ++ K
Sbjct: 31 ILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTK 90
Query: 145 FRI-----------NRVGFAIE------ILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
FR+ +R+ A E M+ G T ++++ VC++ D+ +
Sbjct: 91 FRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLT 150
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
L ++MKK+G +V Y +I K + +++ + +MK G +PD++ Y +
Sbjct: 151 ARSL--FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNAL 208
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+N + ++A E F E+ L P+V +Y+ I+ LCK+ ++ IK M +G
Sbjct: 209 INSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGL 268
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P+ TY++L+ A CK L L EM + + LN+ TY+ ++DGL +G + EA
Sbjct: 269 LPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEE 328
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
L G+ + I G + + KA+EL +M +KD+ P +W ++ L
Sbjct: 329 LFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLC 388
Query: 426 SVSKLD 431
S SKL+
Sbjct: 389 SESKLE 394
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F +M ++G Y+++I + K + +A + ++M + + +IV YT +L+G+
Sbjct: 259 FFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLC 318
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ +AEELF + G+ P++ Y I+G K +++ +++ M E KPD++
Sbjct: 319 EEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDIL 378
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
+ T++ LC +L + ++ EMK GI N Y+ ++D G+ EA LLEE
Sbjct: 379 LWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEM 438
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G F I GLC+RGLV++A+ +M D D+ P V+ AL+
Sbjct: 439 RDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALI 489
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 2/280 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI+ M G + T S ++ + C+ +L E EM + +V YT +
Sbjct: 256 AIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLG--EAFMLADEMLQEHVDLNIVTYTTL 313
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L ++ + +A + M G+ P++ YT +++G I KA ELF+E+ +
Sbjct: 314 LDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDI 373
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ + + GLC ++ +E ++ M+E G + + Y TL+ A K
Sbjct: 374 KPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAIN 433
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L++EM+ G + + T+ +IDGL +G + EA + L +++ I GLC
Sbjct: 434 LLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLC 493
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ + A +L +M DK++ P + A++ ++ +F
Sbjct: 494 KNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNF 533
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
S D+ + EM++ ++ + ++ L + K+ + I+ +MK GI + V YT
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYT 416
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++ + +A L +E+ LG V T+ I+GLCK+ V+ I M +
Sbjct: 417 TLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDH 476
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+P+V Y L+ LCK + ++L EM+ K ++ + Y+ MIDG G+ EA
Sbjct: 477 DLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEA 536
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + G+ + + GL Q G V++A + L +M K + P + LL
Sbjct: 537 LNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLL 594
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 12/268 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ N M D I+ +C + L +++ + EMK+ G V YT +
Sbjct: 361 AMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKII--MTEMKESGIGANPVIYTTL 418
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K +A+ +L +M+ G + +V + +++G+ + +A F + L
Sbjct: 419 MDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDL 478
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V Y I+GLCK N + K+ M++ PD I Y ++ K
Sbjct: 479 QPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALN 538
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M GI L+L Y+ ++ GL+ G + +A L E + KG+ DET+C
Sbjct: 539 MRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIP-----DETLCTRL 593
Query: 393 QR-----GLVRKALELLKQMADKDVSPG 415
R G + +A+EL ++ +K + G
Sbjct: 594 LRKHYELGNIDEAIELQNELVEKGLIHG 621
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 146/299 (48%), Gaps = 7/299 (2%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
F EIL C G+ ++++ C++ ++ + + K G +V +
Sbjct: 123 FYKEILEC----GYPASLYFFNIVMHRFCKEGEMRRAQ--SVFDAITKWGLRPSVVSFNT 176
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ ++ + + + + M + G++PD+ Y++++NG+ + +A ELF+E+L G
Sbjct: 177 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRG 236
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
LVP+ T+ I+ CK V++ +++ M G PD+ITYNTL+ LCK +L ++R
Sbjct: 237 LVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVR 296
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L+ EM G+ + TY+ +IDG +GD+ A + + + + + + + GL
Sbjct: 297 ALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGL 356
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS-FIRLVDQILNTPC 449
CQ G A ++ ++M + P + ++ K D S ++ + + + PC
Sbjct: 357 CQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPC 415
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%)
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ + E+L G +Y +N+ ++ CK+ + + + + G +P V+++NTL+
Sbjct: 122 DFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
++ +L+ L M G+ ++ TYS++I+GL + + EA L E L++GL
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNG 241
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
F I C+ G+V A+E+ KQM + SP + L+ K D
Sbjct: 242 VTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGD 291
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+EI M++ GF D T + ++ +C++ DL ++ + EM G + YT +
Sbjct: 260 AMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLK--QVRALIDEMSMNGLKPDKITYTTL 317
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ + A +M + I+ D V YT +++G+ + AE++F E+L +GL
Sbjct: 318 IDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGL 377
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
PD TY + IN CK+ +V +++ M+ G P V+T
Sbjct: 378 KPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 136/281 (48%), Gaps = 4/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +++ M+N G +D T ++++ C +D +E + +M + GF + + +
Sbjct: 486 ATKVIQTMLNKGIELDSITYNIMIRGCC--KDSKMEEAIKLHGDMTRRGFKPDLFTFNTL 543
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K+ + +L+QMK++G++PDIV Y +++G +D KA+E EL+ GL
Sbjct: 544 LHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGL 603
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V+ YN I G + ++ I + M+ G +P +TY +L+ +C + +
Sbjct: 604 KPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKT 663
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ + + + L + Y+IMI G G ++EA EE ++G+ + +
Sbjct: 664 IFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYS 723
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLL--SSVSKLD 431
+ G +A +L +M V P + L+ S V+ LD
Sbjct: 724 KSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLD 764
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 162/365 (44%), Gaps = 23/365 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P + +I LA +F ++ VL +E+ E I+ +LI + ++
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQL-GVSPNEVIYNELIGWHCRKGHCSQALR 347
Query: 138 LFYK--IPKFRINRVGF---------------AIEILNCMINDGFCVDGKTCSLILSSVC 180
LF + + K + V + A IL M++ G V C L + V
Sbjct: 348 LFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVH---CGLFNTVVA 404
Query: 181 E--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
QR + ++ EM G T +R L K K +A+GI + + G+
Sbjct: 405 WLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLG 464
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
++ +++G+ + +A ++ +L G+ D TYN+ I G CK + +E IK+
Sbjct: 465 VNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKL 524
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M G KPD+ T+NTLL A C + ++ L+ +MK +G+ ++ +Y +IDG
Sbjct: 525 HGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCK 584
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
DI +A L E +++GL +++ I G + G + A++ ++ M + P
Sbjct: 585 AKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVT 644
Query: 419 WEALL 423
+ +L+
Sbjct: 645 YGSLM 649
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 135/311 (43%), Gaps = 10/311 (3%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF---RINRVGFAIEILNCMINDG 164
K E E I D++ H LF + + R R+ + I N M+ G
Sbjct: 373 KEGEMERAERILEDMLSIGMTVH-----CGLFNTVVAWLLQRTRRLESVVSITNEMVTRG 427
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
+ + + +C + E +G + G + +I L + + + +
Sbjct: 428 MRPNDPLMTACMRELC--KGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKE 485
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A ++ M + GI+ D + Y +++ G +A +L ++ G PD++T+N ++
Sbjct: 486 ATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLH 545
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
C +E ++ M+ G +PD+++Y T++ CK +++ + +E + E+ +G+
Sbjct: 546 AYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKP 605
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ Y+ +I G GDI A +E + G+ + + + +C GLV +A +
Sbjct: 606 NVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIF 665
Query: 405 KQMADKDVSPG 415
Q + +V G
Sbjct: 666 SQARENNVDLG 676
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLGLVPDVYTY 279
+ DA +L+ S G P I L ++ A E+FDE+ + + Y+Y
Sbjct: 168 RAADAFRVLS---SRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSY 224
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I LCK V+AG +M+A + G +P V+TYN L+ ALCK + L M+
Sbjct: 225 TAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQ 284
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ ++ T+ I+I+GLA E +L+E G+ +++E I C++G +
Sbjct: 285 GGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQ 344
Query: 400 ALELLKQMADKDVSPGARVW 419
AL L +M K + P A +
Sbjct: 345 ALRLFDEMVLKKMKPTAVTY 364
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 129/263 (49%), Gaps = 8/263 (3%)
Query: 170 KTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
KTC+ L ++ L ++ E+ ++E + + YT +I++L K KV +
Sbjct: 186 KTCNAFLEALVRAGQLDAAREVFDEMRESRNV--ALNEYSYTAMIKALCKAGKVDAGFEM 243
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L ++ G++P +V Y ++++ + +A L + G+ P V T+ + INGL +
Sbjct: 244 LAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLAR 303
Query: 289 QNNV-EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
E GI ++ ME+LG P+ + YN L+ C+ ++ L EM K +
Sbjct: 304 GERFGEVGI-VLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAV 362
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+++ L +G++ A +LE+ L+ G+ +F+ + L QR + LE + +
Sbjct: 363 TYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQR---TRRLESVVSI 419
Query: 408 ADKDVSPGARVWEALLLSSVSKL 430
++ V+ G R + L+ + + +L
Sbjct: 420 TNEMVTRGMRPNDPLMTACMREL 442
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 115/256 (44%), Gaps = 36/256 (14%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ E+ + G +V Y ++ +L K +V +A + +M+ G+ P +V + +++NG+
Sbjct: 243 MLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLA 302
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
E + + + E+ LG+ P+ YN I C++ + +++ M KP +
Sbjct: 303 RGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAV 362
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK------------- 359
TYN + +ALCK E+ R ++++M G+ ++ ++ ++ L +
Sbjct: 363 TYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNE 422
Query: 360 -----------------------GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
G EA G+ + LNKGL + + I GLC+
Sbjct: 423 MVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKY 482
Query: 397 VRKALELLKQMADKDV 412
+++A ++++ M +K +
Sbjct: 483 MKEATKVIQTMLNKGI 498
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
V+ MK G V Y +++ + V +A I +Q + + + ++ YT+++ G
Sbjct: 630 VETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCK 689
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
V+A F+E+ G+ P+ TY + K N E K+ M G PD IT
Sbjct: 690 LGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNIT 749
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
Y TL+ +V L++ E+ + + + Y+I+ +G+
Sbjct: 750 YGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNGI 792
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 1/172 (0%)
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP-DV 311
Q +A + F L G P + T N ++ L + ++A ++ M E + +
Sbjct: 162 AQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNE 221
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+Y +++ALCK +++ E++ E+ G+ + TY++++D L G + EA L
Sbjct: 222 YSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGR 281
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ F I GL + + +L++M VSP ++ L+
Sbjct: 282 MEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 333
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 7/289 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A+ I + MI GF CS ++ + +++L +E ++ LG
Sbjct: 280 RMEELEMALRITHDMIRLGFVPSEANCSFMIDEL-RKKELV-EEAFSLACKLGDLGMVPN 337
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I L K E+ DA + +M G++P+ V Y ++++ + + A LFD
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ VY YN ING CKQ +++ +++ M + G P +Y+ L+ LC+
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L+ EL +EM +GI N T++ +I+G + EA L ++ ++ + F+
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL-----LLSSVSK 429
I G C G +RKA +L QM + + P + +L L S VSK
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I + A ++ + M+ G +D + + + CE R+L D G V M+ G
Sbjct: 175 KIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL--DGARGLVVRMESEGVKAS 232
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ L K +V +A+ + N M + G+ D V Y ++ G E+ A +
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITH 292
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ LG VP + I+ L K+ VE + + +LG P+V YN L+ LCK
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNE 352
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L KEM +G+ N TY+I+I L +G I +A L ++ +KG+ ++
Sbjct: 353 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYN 412
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C++G + +A LL M + ++P A + L+
Sbjct: 413 SLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 171/382 (44%), Gaps = 32/382 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLD-HIEKRE-NFETPEFIFIDLIKTYADAHRFQDS 135
P +Y +I L N D+SS ++ H E E + F LI + + ++
Sbjct: 441 PTAASYSPLIAGLCRNG---DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 136 VNLFYKIPKFRI--NRVGF---------------AIEILNCMINDGFCVDGKTCSLILSS 178
LF K+ + N V F A ++ + M+ G D T ++S
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C +S FV +++ T ++ ++ + + + ++M G+K
Sbjct: 558 LCLTSGVSKAN--EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVK 615
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
D+V +T+++ + Q D K+ LF E+ G+ PD Y I+ L K+ N+ I+
Sbjct: 616 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM---IQA 672
Query: 299 IACMEEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ C +++ G P+ +T+ L+ LCK L L KEM ++ N TY+ +D
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDY 732
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
A++GD +E L A+ +G F+ I GLC+ G +++A++L+ ++ + SP
Sbjct: 733 FATEGD-MEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPD 791
Query: 416 ARVWEALLLSSVSKLDFVNTSF 437
+ + ++ + K+ +N +F
Sbjct: 792 C-ISYSTIIHELCKMGDINKAF 812
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 142/337 (42%), Gaps = 21/337 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AY+ +I L +N +F D + + R E E + LI +D++
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKRGMIEDALC 394
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
LF K R + + N +IN G+C G S D G + M
Sbjct: 395 LF---DKMRDKGIKVTVYPYNSLIN-GYCKQG----------------SLDRARGLLSGM 434
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K G Y+ +I L + + + + +M GI + +T ++NG +
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 494
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A LFD+++ ++P+ T+NV I G C N+ ++ M E+G KPD TY +L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LC +++ E V +++ VLN + + ++ G +G E L +E +G+
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
F + ++ K+ L ++M ++ V P
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 40/310 (12%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
EF+ DL +YA + F + L Y FR R + + M G +D + ++I
Sbjct: 569 EFV-ADLENSYAVLNNFSLTA-LLYGF--FREGRFTETYHLWDEMAVRGVKLDLVSFTII 624
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ + +Q D +L +EMK+ G + YT +I +L K+E + AL +QM D
Sbjct: 625 VYAALKQHDKEKSCVL--FREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 682
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY------------- 282
G P+ V +T+++N + AE L E+L ++P+ +TYN +
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742
Query: 283 ---------------------INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
I GLCK ++ I +++ + E G PD I+Y+T++ L
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 802
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK+ ++N+ EL EM +KG+ ++ Y+I I G+ +A G+ + G+
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862
Query: 382 SMFDETICGL 391
+ + G+
Sbjct: 863 DTYRALLSGI 872
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 1/220 (0%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ ++ SLVK + A + ++M G+ D YT + + A L +
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ YNV + GLCK V+ +++ M +G D +TY TL+ C++ EL
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ +M G V + S MID L K + EA L + + G+ ++ I
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
LC+ A L K+MA + + P V A+L+ ++ K
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPN-EVTYAILIHALCK 385
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L S GI + + +L ++ + A +LFD++L G+ D Y Y I C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ N++ ++ ME G K + YN L+ LCK + E+ M G+ +
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY ++ G ++ A + + + G + I L ++ LV +A L ++
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329
Query: 408 ADKDVSPGARVWEALL 423
D + P + AL+
Sbjct: 330 GDLGMVPNVFAYNALI 345
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 154 IEILNC---MINDGFCVDGKTCSLILSSVCEQRDLSSDELL------GFVQEMKKLGFCF 204
I+ LNC M+ DG+ + T +++++++C+ L S ELL G V K CF
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+DY + K + + A+ G IV + +++ G+ +A +L
Sbjct: 730 --LDYFATEGDMEKAKDLHSAM-------LQGHLASIVSFNILIKGLCKAGKIQEAIDLM 780
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G PD +Y+ I+ LCK ++ ++ M G KPDV+ YN ++ C V
Sbjct: 781 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR-WCNV 839
Query: 325 R-ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
E ++ + M G+ N TY ++ G++
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 175/395 (44%), Gaps = 29/395 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P + Y +I L+ + +F +++ + H + + LI RF+
Sbjct: 337 GCGPNVQTYTALISGLSRDGKF-EVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFET 395
Query: 135 SVNLFY------KIPKFRINRV---GF--------AIEILNCMINDGFCVDGKTCSLILS 177
++ +F +P V GF A I + M+ G + T ++I+
Sbjct: 396 ALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIH 455
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+Q + + + ++ MK G Y N+I + K+ A + N+M GI
Sbjct: 456 IYFKQGYM--NNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGI 513
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P++V Y ++NG + A LF +++ G VP TYN+ I+G K N +
Sbjct: 514 SPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAEN 573
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M + G P+VITY + + LCK + ++ EMK + NL TYS +IDGL
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLC 633
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+G +A LL++ + T +++ + GLC +G +A +L++ M K + P
Sbjct: 634 QEGQAEDAERLLDDGCEPNVDTYTTL----VRGLCGKGRCYEADQLVESMKKKGLQPSEE 689
Query: 418 VWEALLLSSVSKLDFVNTSFIRLVDQILNT---PC 449
++ ALL+ L+ S +++ D ++ T PC
Sbjct: 690 IYRALLVGQCKNLEV--ESALKIFDSMVTTGFQPC 722
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 140/288 (48%), Gaps = 5/288 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGM 206
R+ A+++L MI+ G ++ + S+C+ R + +LLG +MKK G +
Sbjct: 286 GRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLG---KMKKRGCGPNV 342
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
YT +I L + K A+G+ ++M +DG+ P V Y+ ++N + V+ + A +F+
Sbjct: 343 QTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEW 402
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L +P+ TYNV I G C ++ + M + G P+VITYN ++ K
Sbjct: 403 MLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGY 462
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+N L++ MK G+ L+ TY+ +I G + G + A L E + G+ ++
Sbjct: 463 MNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNA 522
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
I G V AL L +M + P + + +++S SK + ++
Sbjct: 523 IINGYLTVAKVDDALALFWKMVESGNVPSSGTYN-MMISGFSKTNRIS 569
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 189/432 (43%), Gaps = 33/432 (7%)
Query: 46 LTTPPTKQQQQ----IPK-QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDIS 100
L++P ++ + IPK +PH + +LL + + N E +H+V +T
Sbjct: 58 LSSPTWERSSELSHLIPKLKPHHVVNLLDTHN--NTESVLRFFHWVSRTHFFKHDMSCFV 115
Query: 101 SVLDHIEKRENFETPEFIFIDLIK--------------------TYADAHRFQDSVNLFY 140
S+L+ + + F + + I +IK TY + L
Sbjct: 116 SMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLI 175
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
++ KF ++ +G + I M+N G + T + ++ +C + + EL+ + +
Sbjct: 176 QLGKFDMDGLGRDVYIE--MLNSGIRPNLFTFNAMIKILCNKGKVQEAELI--MGHIFHY 231
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G C YT++I K + A + ++M DG P+ V Y+ ++NG+ + +A
Sbjct: 232 GACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEA 291
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
++ +E++ G+ P V+ Y + I LC +K++ M++ G P+V TY L+
Sbjct: 292 MDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISG 351
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L + + + +M G+V TYS +I+ L +G A + E L+
Sbjct: 352 LSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPN 411
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
+ ++ I G C G ++KA + QM SP + +++ K ++N + +RL
Sbjct: 412 TETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYN-IIIHIYFKQGYMNNA-MRL 469
Query: 441 VDQILNTPCKME 452
++ + K++
Sbjct: 470 LEMMKGNGLKLD 481
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 148/377 (39%), Gaps = 52/377 (13%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P E Y+ +IK +++ D + K +P I ++I ++
Sbjct: 410 PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAG--PSPNVITYNII------------IH 455
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
++ F+ + A+ +L M +G +D T + ++S L + EM
Sbjct: 456 IY-----FKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL--EHAFSLFNEM 508
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
+ G +V Y +I + KV DAL + +M G P Y M+++G
Sbjct: 509 VEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRI 568
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL------------ 305
+AE +++ GL+P+V TY +I+GLCK K+ M++
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSL 628
Query: 306 -------------------GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
G +P+V TY TL++ LC +LV+ MK KG+ +
Sbjct: 629 IDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSE 688
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+ Y ++ G ++ A + + + G S + IC LC+ +KA + +
Sbjct: 689 EIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQT 748
Query: 407 MADKDVSPGARVWEALL 423
M K + VW LL
Sbjct: 749 MLKKHWNSDEVVWTVLL 765
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 119/292 (40%), Gaps = 24/292 (8%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
+I Y + D++ LF+K M+ G T ++++S +
Sbjct: 523 IINGYLTVAKVDDALALFWK------------------MVESGNVPSSGTYNMMISGFSK 564
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+S E F +M K G ++ YT+ I L K + A I ++MK P++
Sbjct: 565 TNRISEAE--NFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNL 622
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y+ +++G+ + AE L D+ G P+V TY + GLC + +++
Sbjct: 623 CTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVES 678
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M++ G +P Y LL CK E+ ++ M G L Y +I L
Sbjct: 679 MKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANF 738
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+A + + L K + ++ + GL + G +LELL M ++ +
Sbjct: 739 RQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCT 790
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT ++R L K + ++A ++ MK G++P Y +L G + A ++FD ++
Sbjct: 656 YTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMV 715
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P + Y I LCK N + M M + D + + LL L K E +
Sbjct: 716 TTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETD 775
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
EL+ M+ + LN QT ++ L++ G IE
Sbjct: 776 LSLELLHVMESRNCTLNFQTRVMLARELSALGCSIE 811
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 113/209 (54%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +K + + + N M++ G++PD+ Y++++NG+ + A ELFD
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 231 EMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + P
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + +
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 ELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ +I M G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMIDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 83/170 (48%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ TYS++I+GL + + +A L +E ++ GL
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + MI++G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G + ++ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ ++ A +++ M G +D T + +L ++C +R L DE + ++ G+
Sbjct: 419 KVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKL--DEAHDLLCSARRRGYFVD 476
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I K EK AL + ++MK I P I+ Y ++ G+ +A + D
Sbjct: 477 EVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLD 536
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
ELL GLVPD TYN I+G C++ VE + M E KPDV+T NTLL LCK
Sbjct: 537 ELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEG 596
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + +L KG ++ +Y+ +I L + EA LLEE K L ++
Sbjct: 597 MLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYN 656
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVS 413
+ GL G ++ A E + ++A+K S
Sbjct: 657 AILGGLTDAGRMKDAEEFISKIAEKGKS 684
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 139/313 (44%), Gaps = 40/313 (12%)
Query: 149 RVGF---AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+G+ A ++ M + D T ++++S C+Q ++ E + +EM+ L
Sbjct: 279 RLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIA--EAMRLREEMENLKLSPD 336
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I + + ++ +M+ G+KP+ V Y +++ + + + ++
Sbjct: 337 VVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR 396
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G +PD+ TYN I+ CK ++ +++ M G K D +T NT+L+ALC+ R
Sbjct: 397 KMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRER 456
Query: 326 ELNRLRELV-----------------------------------KEMKWKGIVLNLQTYS 350
+L+ +L+ EMK K I+ ++ TY+
Sbjct: 457 KLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYN 516
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
MI GL G +A L+E L GL ++ I G CQ G V KA + +M +K
Sbjct: 517 SMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEK 576
Query: 411 DVSPGARVWEALL 423
+ P LL
Sbjct: 577 NFKPDVVTCNTLL 589
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 3/202 (1%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVI---VQEDYVKAEELFDELLVLGLVPDVYTYNV 281
A I N+MK G++P ++ +LN ++ ++ +F + + +G+ + ++N+
Sbjct: 143 AAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNI 202
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+G C +N I+++ M + G PD ITYNT+L LCK LN R+L+ +MK KG
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG 262
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ N T++I++ G G + EA ++E + + ++ I G C++G + +A+
Sbjct: 263 LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM 322
Query: 402 ELLKQMADKDVSPGARVWEALL 423
L ++M + +SP + L+
Sbjct: 323 RLREEMENLKLSPDVVTYNTLI 344
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 138/309 (44%), Gaps = 33/309 (10%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVC------EQRDLSSDE------------ 189
NR G AI +L M + G D T + IL +C E RDL D
Sbjct: 211 NRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTF 270
Query: 190 --------LLGFVQE-------MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
LG+++E M + Y +I K+ ++ +A+ + +M++
Sbjct: 271 NILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMEN 330
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+ PD+V Y ++NG + +L +E+ G+ P+ TYNV + K+ ++
Sbjct: 331 LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDE 390
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
K + MEE G PD++TYNTL+ CKV +++ L+ EM KG+ ++ T + M+
Sbjct: 391 VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLR 450
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + + EA LL A +G + I G + +AL L +M +K++ P
Sbjct: 451 ALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510
Query: 415 GARVWEALL 423
+ +++
Sbjct: 511 SIITYNSMI 519
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + EM + G V ++R+L ++ K+ +A +L + G D V Y +
Sbjct: 424 DEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTL 483
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G E +A L+DE+ ++P + TYN I GLC+ I + + E G
Sbjct: 484 IIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGL 543
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD ITYNT++ C+ ++ + + +M K ++ T + ++ GL +G + +A
Sbjct: 544 VPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALK 603
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L ++KG + ++ I LC+ +A +LL++M +K + P + A+L
Sbjct: 604 LFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAIL 659
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 141/304 (46%), Gaps = 9/304 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV-QEMKKLGFCFGMVDYTN 211
A +I N M G TC+ +L+++ S L V + K+G +
Sbjct: 143 AAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNI 202
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I + + +A+ +L +M+ G PD + Y +L+G+ + +A +L ++ G
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG 262
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK---VRELN 328
L P+ T+N+ + G C+ ++ +I M + PD TYN ++ CK + E
Sbjct: 263 LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM 322
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
RLRE ++ +K V+ TY+ +I+G G E L+EE +G+ S ++ +
Sbjct: 323 RLREEMENLKLSPDVV---TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMV 379
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTP 448
++G + + + +++M + P + L+S K+ ++ +F RL+D++
Sbjct: 380 KWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNT-LISWHCKVGKMDEAF-RLMDEMGRKG 437
Query: 449 CKME 452
KM+
Sbjct: 438 LKMD 441
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 2/242 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ C+ + S L+ E+ K G +V + +I K V + + M
Sbjct: 146 NVLMHGFCKVGGVGSARLV--FDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVM 203
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+S+ + PD+ ++ ++NG+ + + LFDE+ GLVP+ T+ V I+G CK V
Sbjct: 204 ESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKV 263
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ +K M G +PD++TYN L+ LCKV +L R LV EM G+ + T++ +
Sbjct: 264 DLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTL 323
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDG GD+ A + + +G+ F I GLC+ G V A +L+ M
Sbjct: 324 IDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGF 383
Query: 413 SP 414
P
Sbjct: 384 KP 385
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 155/337 (45%), Gaps = 20/337 (5%)
Query: 105 HIEKRENFETPEFIFID-LIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNC-- 159
++E ++ P F F + L+ + + +F +IPK R V F I C
Sbjct: 130 YLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCK 189
Query: 160 --MINDGF-----------CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ +GF C D T S +++ +C++ L LL EM G
Sbjct: 190 AGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLL--FDEMCGKGLVPNG 247
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V +T +I K KV AL M + G++PD+V Y ++NG+ D +A L +E
Sbjct: 248 VTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNE 307
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ GL PD T+ I+G CK ++E+ +++ M E G + D + + L+ LC+
Sbjct: 308 MSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGR 367
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ ++++M G + TY++++D KG++ LL+E + G ++
Sbjct: 368 VHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNA 427
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC++G V+ A LL M + V+P + LL
Sbjct: 428 LMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILL 464
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A++ M+ G D T + +++ +C+ DL L V EM G +
Sbjct: 261 GKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRL--VNEMSASGLRPDRI 318
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+T +I K + AL I +M +GI+ D V +T++++G+ AE + ++
Sbjct: 319 TFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDM 378
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G PD TY + ++ CK+ NV G K++ M+ G P V+TYN L+ LCK ++
Sbjct: 379 LSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQV 438
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
+ L+ M G+ N TY+I+++G + G ++
Sbjct: 439 KNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVD 475
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G +G T ++++ C+ + D L Q M G +V Y +I L K
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKV--DLALKNFQMMLAQGVRPDLVTYNALINGLCKV 295
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A ++N+M + G++PD + +T +++G D A E+ ++ G+ D +
Sbjct: 296 GDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAF 355
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
V I+GLC+ V +M+ M G KPD TY ++ CK + +L+KEM+
Sbjct: 356 TVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQS 415
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
G V + TY+ +++GL +G + A LL+ LN G+ ++ + G + G
Sbjct: 416 DGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 138/277 (49%), Gaps = 2/277 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++LN M DG D T + ++S +C S + V M K + + +
Sbjct: 205 ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM--VSCMTKREIYPDVFTFNAL 262
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + VK+ +V +A +M + PDIV Y++++ G+ + +AEE+F ++ G
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY++ ING CK VE G+K+ M + G + +TY L+Q C+ +LN E
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEE 382
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ + M + G+ N+ TY++++ GL G I +A +L + G+ ++ I G+C
Sbjct: 383 IFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMC 442
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ G V A ++ + + + P + ++L K
Sbjct: 443 KAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 134/273 (49%), Gaps = 4/273 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
TC+++L+ C LS L F+ +M KLG +V + +++ + ++V+DAL + +
Sbjct: 118 TCNILLNCFCRCSQLSL--ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G KP++V Y +++G+ + A +L + + G+ PDV TYN I+GLC
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+M++CM + PDV T+N L+ A K ++ E +EM + + ++ TYS
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++I GL + EA + ++KG + I G C+ V ++L +M+ +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 411 DVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
V + L+ KL+ F R+V
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 37/297 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ L MI G T +L+ C + D D L F Q M +G+
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC-RGDRVYDALYMFDQ-MVGMGYKPN 185
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV-------------- 251
+V Y +I L K ++V +AL +LN+M+ DGI PD+V Y +++G+
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 252 --------------------IVQEDYV-KAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
V+E V +AEE ++E++ L PD+ TY++ I GLC +
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ +M M G PDV+TY+ L+ CK +++ +L EM +G+V N TY+
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I+I G G + A + + G+ ++ + GLC G + KAL +L M
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +LS++ + + D ++ ++M+ LG + ++ + ++ AL L +M
Sbjct: 85 SRLLSAISKMKKY--DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G +P IV + +LNG + A +FD+++ +G P+V YN I+GLCK V
Sbjct: 143 IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + ++ ME+ G PDV+TYN+L+ LC + +V M + I ++ T++ +
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
ID +G + EA EE + + L + I GLC + +A E+ M K
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 413 SPGARVWEALL 423
P + L+
Sbjct: 323 FPDVVTYSILI 333
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 109/235 (46%), Gaps = 6/235 (2%)
Query: 201 GFCFGMVDYTN------VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
GFCF Y+N ++R+ ++ K+ D+L + M P I ++ +L+ +
Sbjct: 35 GFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM 94
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ Y L++++ +LG+ ++ T N+ +N C+ + + + + M +LG +P ++T+
Sbjct: 95 KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTF 154
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+LL C+ + + +M G N+ Y+ +IDGL + A LL
Sbjct: 155 GSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK 214
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G+ ++ I GLC G A ++ M +++ P + AL+ + V +
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 22/286 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSV 136
P Y+ +I L + ++ D + ++ + KRE + P+ F F LI R ++
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY--PDVFTFNALIDACVKEGRVSEAE 276
Query: 137 NLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
+ ++ + ++ R+ A E+ M++ G D T S++++
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C+ + + + + EM + G V YT +I+ + K+ A I +M G+ P
Sbjct: 337 CKSKKV--EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
+I+ Y ++L+G+ KA + ++ G+ D+ TYN+ I G+CK V +
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+ G PD+ TY T++ L K L ++MK GI+ N
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 150/325 (46%), Gaps = 19/325 (5%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLF--------------YKIPKFRINRVGFAIEILNC-- 159
E + +LI +A R +++ LF Y + + ++ G +E LN
Sbjct: 264 EVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFN 323
Query: 160 -MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M G + T ++++ +C++ + DE + EM + G +V Y +I K
Sbjct: 324 EMKEKGCEPNVHTYTVLIDGLCKENKM--DEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ + DA IL+ M+S+ P+ Y ++ G+ + KA L +++L L P + T
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I+G CK N++E+ ++++ M E G PD TY+ + LCK + L +K
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KG+ N Y+ +IDG G I A LLE LN S ++ I GLC+ ++
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A L+ +M V P + L+
Sbjct: 562 EASSLVAKMLTMGVKPTVVTYTILI 586
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 17/276 (6%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N++ I N M+N G+C G L + ++ + G
Sbjct: 188 NQISPNIYTFNAMVN-GYCKIGNVVEAEL----------------YASKIVQAGLHPDTF 230
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT++I + + V +A + M G + + V YT +++G+ +A +LF ++
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
P V TY V I L + + M+E G +P+V TY L+ LCK ++
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKM 350
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ R+++ EM KG++ ++ TY+ +IDG +G I +A +L+ + + ++E
Sbjct: 351 DEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNEL 410
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
ICGLC++ V KA+ LL +M ++ +SP + +L+
Sbjct: 411 ICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 43/254 (16%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ SL K + + + ++ ++ I P+I + ++NG + V+AE +++
Sbjct: 162 YNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV 221
Query: 269 VLGLVPDVYTY--------------NVY---------------------INGLCKQNNVE 293
GL PD +TY N Y I+GLC+ +
Sbjct: 222 QAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALC----KVRELNRLRELVKEMKWKGIVLNLQTY 349
+K+ A M E P V TY L+ AL KV LN L EMK KG N+ TY
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN----LFNEMKEKGCEPNVHTY 337
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+++IDGL + + EA +L E KGL ++ I G C+ G++ A E+L M
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Query: 410 KDVSPGARVWEALL 423
P R + L+
Sbjct: 398 NSCGPNTRTYNELI 411
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 160/367 (43%), Gaps = 22/367 (5%)
Query: 75 NCEPPPEAYHFVI-------------KTLAENSQFCDISSVLDH---IEK--RENFETPE 116
CEP Y +I K L+E S+ I SV+ + I+ +E
Sbjct: 329 GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDA 388
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F +DL+++ + + L + K R +V A+ +LN M+ T + ++
Sbjct: 389 FEILDLMESNSCGPNTRTYNELICGLCKKR--KVHKAMALLNKMLERKLSPSLITYNSLI 446
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
C+ DL S L + M + G Y+ I +L K+ +V +A + + +K+ G
Sbjct: 447 HGQCKVNDLESAYRL--LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+K + V YT +++G A L + +L +P+ YTYNV I GLCK+ ++
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++A M +G KP V+TY L+ + K + ++ M G ++ TY+ +
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
S+G + E ++ + +G+ + I G + GL +A + LK M D P
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684
Query: 417 RVWEALL 423
+ L+
Sbjct: 685 YIVSILI 691
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 20/289 (6%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ N M++ G+ D T + L + Q L +E+ + +M + G +V YT +
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML--EEVDDVIAKMNEEGILPDLVTYTVL 655
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE----------------- 255
I + A L M G KP + ++++ + +
Sbjct: 656 IDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNT 715
Query: 256 -DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+Y A +LF++++ G DV Y I G C+Q +E ++ M+E G P Y
Sbjct: 716 LEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 775
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N+LL CK+ LV M G++ L++Y +++ GL +G +A + L+
Sbjct: 776 NSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLS 835
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + I GL +R LV + EL+ M +K P + L+
Sbjct: 836 CGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLI 884
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L ++M + G + Y +I ++E++ +A G+++ MK G+ P Y +L+
Sbjct: 722 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 781
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
Y +A L D ++ GL+P + +Y + + GL + + E + + G D
Sbjct: 782 CCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 841
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ + L+ L K ++ EL+ M+ KG N TYS++I+GL
Sbjct: 842 EVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 142/291 (48%), Gaps = 7/291 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A+ I + MI GF CS ++ + +++L +E ++ LG
Sbjct: 280 RMEELEMALRITHDMIRLGFVPSEANCSFMIDEL-RKKELV-EEAFSLACKLGDLGMVPN 337
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I L K E+ DA + +M G++P+ V Y ++++ + + A LFD
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ VY YN ING CKQ +++ +++ M + G P +Y+ L+ LC+
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L+ EL +EM +GI N T++ +I+G + EA L ++ ++ + F+
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL-----LLSSVSKLD 431
I G C G +RKA +L QM + + P + +L L S VSK +
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKAN 568
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I + A ++ + M+ G +D + + + CE R+L D G V M+ G
Sbjct: 175 KIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL--DGARGLVVRMESEGVKAS 232
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ L K +V +A+ + N M + G+ D V Y ++ G E+ A +
Sbjct: 233 AVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITH 292
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ LG VP + I+ L K+ VE + + +LG P+V YN L+ LCK
Sbjct: 293 DMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNE 352
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L KEM +G+ N TY+I+I L +G I +A L ++ +KG+ ++
Sbjct: 353 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYN 412
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C++G + +A LL M + ++P A + L+
Sbjct: 413 SLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 171/382 (44%), Gaps = 32/382 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLD-HIEKRE-NFETPEFIFIDLIKTYADAHRFQDS 135
P +Y +I L N D+SS ++ H E E + F LI + + ++
Sbjct: 441 PTAASYSPLIAGLCRNG---DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 136 VNLFYKIPKFRI--NRVGF---------------AIEILNCMINDGFCVDGKTCSLILSS 178
LF K+ + N V F A ++ + M+ G D T ++S
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C +S FV +++ T ++ ++ + + + ++M G+K
Sbjct: 558 LCLTSGVSKAN--EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVK 615
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
D+V +T+++ + Q D K+ LF E+ G+ PD Y I+ L K+ N+ I+
Sbjct: 616 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM---IQA 672
Query: 299 IACMEEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ C +++ G P+ +T+ L+ LCK L L KEM ++ N TY+ +D
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDY 732
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
A++GD +E L A+ +G F+ I GLC+ G +++A++L+ ++ + SP
Sbjct: 733 FATEGD-MEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPD 791
Query: 416 ARVWEALLLSSVSKLDFVNTSF 437
+ + ++ + K+ +N +F
Sbjct: 792 C-ISYSTIIHELCKMGDINKAF 812
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 142/337 (42%), Gaps = 21/337 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AY+ +I L +N +F D + + R E E + LI +D++
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKRGMIEDALC 394
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
LF K R + + N +IN G+C G S D G + M
Sbjct: 395 LF---DKMRDKGIKVTVYPYNSLIN-GYCKQG----------------SLDRARGLLSGM 434
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K G Y+ +I L + + + + +M GI + +T ++NG +
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 494
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A LFD+++ ++P+ T+NV I G C N+ ++ M E+G KPD TY +L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LC +++ E V +++ VLN + + ++ G +G E L +E +G+
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
F + ++ K+ L ++M ++ V P
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 40/310 (12%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
EF+ DL +YA + F + L Y FR R + + M G +D + ++I
Sbjct: 569 EFV-ADLENSYAVLNNFSLTA-LLYGF--FREGRFTETYHLWDEMAVRGVKLDLVSFTII 624
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ + +Q D +L +EMK+ G + YT +I +L K+E + AL +QM D
Sbjct: 625 VYAALKQHDKEKSCVL--FREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 682
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY------------- 282
G P+ V +T+++N + AE L E+L ++P+ +TYN +
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742
Query: 283 ---------------------INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
I GLCK ++ I +++ + E G PD I+Y+T++ L
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 802
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK+ ++N+ EL EM +KG+ ++ Y+I I G+ +A G+ + G+
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862
Query: 382 SMFDETICGL 391
+ + G+
Sbjct: 863 DTYRALLSGI 872
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 1/220 (0%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ ++ SLVK + A + ++M G+ D YT + + A L +
Sbjct: 167 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 226
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ YNV + GLCK V+ +++ M +G D +TY TL+ C++ EL
Sbjct: 227 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 286
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ +M G V + S MID L K + EA L + + G+ ++ I
Sbjct: 287 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 346
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
LC+ A L K+MA + + P V A+L+ ++ K
Sbjct: 347 KLCKNERFDDADRLFKEMAGRGLEPN-EVTYAILIHALCK 385
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L S GI + + +L ++ + A +LFD++L G+ D Y Y I C
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ N++ ++ ME G K + YN L+ LCK + E+ M G+ +
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY ++ G ++ A + + + G + I L ++ LV +A L ++
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 329
Query: 408 ADKDVSPGARVWEALL 423
D + P + AL+
Sbjct: 330 GDLGMVPNVFAYNALI 345
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 154 IEILNC---MINDGFCVDGKTCSLILSSVCEQRDLSSDELL------GFVQEMKKLGFCF 204
I+ LNC M+ DG+ + T +++++++C+ L S ELL G V K CF
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+DY + K + + A+ G IV + +++ G+ +A +L
Sbjct: 730 --LDYFATEGDMEKAKDLHSAM-------LQGHLASIVSFNILIKGLCKAGKIQEAIDLM 780
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G PD +Y+ I+ LCK ++ ++ M G KPDV+ YN ++ C V
Sbjct: 781 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR-WCNV 839
Query: 325 R-ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
E ++ + M G+ N TY ++ G++
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGIS 873
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 4/299 (1%)
Query: 149 RVGFAIEILNCMINDGFCV-DGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGM 206
RVG A+++L + + C+ D + +++L +C E+R + ELL + + +
Sbjct: 140 RVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNV 199
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ VI + +V + +M GI PD+V YT V++G+ + + +AE +F +
Sbjct: 200 VSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQ 259
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G P+ YTYN I+G + ++M+ M G KPD TY +LL LCK
Sbjct: 260 MIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGR 319
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
R M KGI + TY I+I G A+KG + E L+ + GL +F+
Sbjct: 320 CREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNI 379
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ G++ KA+++ +M +SP + AL+ L + ++D F +++++
Sbjct: 380 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 438
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 156/362 (43%), Gaps = 22/362 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDS 135
+P Y +I A ++ S LD + EN +P+ IF YA +
Sbjct: 336 KPKVSTYGILIHGYATKGALSEMHSFLDLMV--ENGLSPDHHIFNIFFSAYAKCGMIDKA 393
Query: 136 VNLFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+++F K+ + ++ RV A N MIN+G + + ++
Sbjct: 394 MDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYG 453
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C E L V EM G C V + +I +L +V + +++ M+ G++
Sbjct: 454 LCTVDKWERAEEL--VYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR 511
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD YT +++G + +AE++FD ++ +GL P TYN ++G C + ++ +
Sbjct: 512 PDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 571
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M G P V+TYNT+L L + + + +EL M G ++ TY+I+++GL
Sbjct: 572 FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCK 631
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+ EA + + +KGL F I L + G A++L + + P
Sbjct: 632 SNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVT 691
Query: 419 WE 420
+
Sbjct: 692 YR 693
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 16/260 (6%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G+C+ G+T DE M +G V Y ++ ++
Sbjct: 523 GYCLTGRT----------------DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 566
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA + +M G+ P +V Y +L+G+ + + +A+EL+ ++ G D+YTYN+ +
Sbjct: 567 DAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIIL 626
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
NGLCK N V+ KM + G + ++IT+ ++ AL K +L + G+V
Sbjct: 627 NGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV 686
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ TY ++ + L +G + E L G S M + + L RG + +A
Sbjct: 687 PNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAY 746
Query: 404 LKQMADKDVSPGARVWEALL 423
L ++ +++ S A L+
Sbjct: 747 LSKLDERNFSVEASTTSLLM 766
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 110/235 (46%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E++ ++EM G Y +++ L K + +A + M GIKP + Y +++
Sbjct: 287 EVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILI 346
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G + + D ++ GL PD + +N++ + K ++ + + M + G
Sbjct: 347 HGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS 406
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+V+ Y L+ ALCK+ ++ +M +G+ N+ ++ ++ GL + A L
Sbjct: 407 PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 466
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E L++G+C + F+ IC LC G V + L+ M V P A + L+
Sbjct: 467 VYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLI 521
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI+ G D T + ++ +C+ + E G Q+M GF Y +I +
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAE--GVFQQMIDNGFKPNNYTYNCLIHGYLSI 282
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K + + +L +M + G+KPD Y +LN + +A FD ++ G+ P V TY
Sbjct: 283 GKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTY 342
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+G + + + M E G PD +N A K +++ ++ +M+
Sbjct: 343 GILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ 402
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+ N+ Y +ID L G + +A + +N+G+ +F+ + GLC +
Sbjct: 403 HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWER 462
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A EL+ +M D+ + P A + L+
Sbjct: 463 AEELVYEMLDQGICPNAVFFNTLI 486
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 211 NVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
N+ S K + D A+ I N+M+ G+ P++V Y +++ + AE F++++
Sbjct: 378 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 437
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ P++ +N + GLC + E +++ M + G P+ + +NTL+ LC V +
Sbjct: 438 EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVME 497
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
R L+ M+ G+ + +Y+ +I G G EA + + ++ GL ++ +
Sbjct: 498 GRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 557
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C + A L ++M K V+PG + +L
Sbjct: 558 GYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 591
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 39/196 (19%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE----- 326
+ P++ TY++ I C+ ++E G + + G + D I N LL+ LC +
Sbjct: 86 VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145
Query: 327 ---LNRLREL--VKEMKWKGIVL-----------------------------NLQTYSIM 352
L R+ EL + + I+L N+ +YSI+
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G ++G + + L E +++G+ + I GLC+ L +A + +QM D
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265
Query: 413 SPGARVWEALLLSSVS 428
P + L+ +S
Sbjct: 266 KPNNYTYNCLIHGYLS 281
>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L C+ D+ + L Q M+ G +V Y ++ L + + A G+L MK
Sbjct: 207 LLDGYCKSGDM--EAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKG 264
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
DG++P++V YT + A L++E++ +G++PDV T + ++GLC+
Sbjct: 265 DGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSE 324
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ME++G+ P+ +TY TL+ +L K R + L+ E+ +G+V++L Y+ ++D
Sbjct: 325 AYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMD 384
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L +G I E + AL+ + I LC+ G V A ++L +M DK V P
Sbjct: 385 WLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHP 444
Query: 415 GARVWEALL 423
+ +++
Sbjct: 445 NVVTFSSII 453
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 2/262 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R N V A + M+ G D T S ++ +C S E +EM+K+G
Sbjct: 283 RTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFS--EAYALFREMEKIGAAPN 340
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I SL K + ++ G+L ++ S G+ D+V YT +++ + Q + +++F
Sbjct: 341 HVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFH 400
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L P+ TY V I+ LC+ NV+ +M+ ME+ P+V+T+++++ L K
Sbjct: 401 CALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQG 460
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + + +++MK +GI N+ TY ++DG + A L E L +G+ + D
Sbjct: 461 LLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVD 520
Query: 386 ETICGLCQRGLVRKALELLKQM 407
+ GL + G + +A L + M
Sbjct: 521 LLVNGLRKNGKMEEAEALFRDM 542
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 107/215 (49%), Gaps = 2/215 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++ +C ++D +G T ++++ ++C ++ E + + EM+ +V ++++I
Sbjct: 397 DMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQM--LLEMEDKSVHPNVVTFSSIIN 454
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L K+ + A + +MK GI P++V Y V++G ++ A +L+ E+L G+
Sbjct: 455 GLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEV 514
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ + ++ +NGL K +E + M + G D + Y TL+ L K+ + ++
Sbjct: 515 NKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVG 574
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
+E+ + + + Y++ ++ L G EA +L
Sbjct: 575 QELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 98/198 (49%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I +L + V A +L +M+ + P++V ++ ++NG+ Q KA + +
Sbjct: 412 VTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRK 471
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ P+V TY ++G K E+ + + M G + + + L+ L K +
Sbjct: 472 MKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGK 531
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ L ++M +G++L+ Y+ +IDGL G++ A + +E + L + +++
Sbjct: 532 MEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNV 591
Query: 387 TICGLCQRGLVRKALELL 404
+ LC G ++A +L
Sbjct: 592 FVNCLCMLGKSKEAESIL 609
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 275 DVYTYNVYINGLCKQNNVEAGI--KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D +YNV I+GL +Q G+ ++A M + G D +T NT L ALC+ ++
Sbjct: 127 DTVSYNVVISGLTEQGR-HGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAA 185
Query: 333 LVKEMKWKGI---VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L EM +G L++ ++ ++DG GD+ A + +G+ ++ +
Sbjct: 186 LA-EMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVA 244
Query: 390 GLCQRGLVRKALELLKQMADKDVSP 414
GLC+ G A +L+ M V P
Sbjct: 245 GLCRAGEADAARGMLETMKGDGVEP 269
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 168/374 (44%), Gaps = 20/374 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L + + C P A+ +I L + +F V + ++ + F + LI+ +
Sbjct: 52 LFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQK-GCQLDRFAYNVLIRYF 110
Query: 127 ADAHRFQDSVNLFYKIP-----------KFRINRVGFAIEI------LNCMINDGFCVDG 169
+ + ++ +F ++ F +N +G A + + M+ G +
Sbjct: 111 GRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNI 170
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T +L++ + + L D LG EMK+ GF +V Y ++ +L +V A +
Sbjct: 171 PTYNLLMDAFRKVGQL--DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLF 228
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
++M DG PD Y+ ++NG+ +A ++F E++ G+ D+ YN + L K
Sbjct: 229 HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKA 288
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
N++ K++ M G PD ++NT++ AL K + + RE+ M G +L +Y
Sbjct: 289 GNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISY 348
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+I+ID A GD +A +LEE + G ++ ++ I L G V +A +L++M
Sbjct: 349 NILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMET 408
Query: 410 KDVSPGARVWEALL 423
P + L+
Sbjct: 409 AGCRPDVVTYNRLM 422
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 119/237 (50%), Gaps = 2/237 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A ++ M++ G VD + +L+++ + ++ D + ++EM + GF
Sbjct: 254 GRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNM--DRVWKLMKEMSRKGFHPDAF 311
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ ++ +L K K A + +M G KPD++ Y ++++ D +A ++ +E+
Sbjct: 312 SFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEM 371
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G +P+ TYN I+ L V+ ++ ME G +PDV+TYN L+ L K E
Sbjct: 372 VEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGEN 431
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R L ++MK KG+ + +Y++ IDGLA + EA L ++ G +M+
Sbjct: 432 QRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMY 488
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 158/358 (44%), Gaps = 20/358 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKR---ENFETPEFIF---- 119
+ I EP Y F++ L + + + S D + +R N T +
Sbjct: 122 MFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFR 181
Query: 120 ----IDL-IKTYADAHR--FQDSVNLFYKI---PKFRINRVGFAIEILNCMINDGFCVDG 169
+D+ + +A+ R FQ SV + Y I RVG A ++ + M DG D
Sbjct: 182 KVGQLDMALGLFAEMKRRGFQPSV-VTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDS 240
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T S +++ + + + +E +EM G +V+Y +++ +L K + ++
Sbjct: 241 YTYSTLVNGLGKSGRV--EEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLM 298
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+M G PD + +++ + A E+F ++ G PD+ +YN+ I+ +
Sbjct: 299 KEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARF 358
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ +M+ M E G P+ TYN+L+ L +++ +++EM+ G ++ TY
Sbjct: 359 GDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTY 418
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+ ++D L +G+ A L ++ +KG+ + + I GL + +AL L K M
Sbjct: 419 NRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I + + K DA + NQ +S P + +T +++ ++ ++ +AE ++ +L+ G
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
D + YNV I + +++ ++M M+ GS+PD TY L+ AL K + R
Sbjct: 96 CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
M +G+ N+ TY++++D G + A GL E +G ++ + L
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
C G V A +L +M SP + + L+ L +++ + F +VD+
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDR 269
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ N+ A E+ M+ G D + ++++ S D + + ++EM + GF
Sbjct: 322 KANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQM--LEEMVEAGFIPE 379
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y ++I L +V +A +L +M++ G +PD+V Y +++ + + + +A LF
Sbjct: 380 TKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQ 439
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
++ G+ PD +Y V I+GL + ++ + + M+ +G D Y L++A
Sbjct: 440 QMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRA 494
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 95/228 (41%), Gaps = 20/228 (8%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y+ ++ TLA+ + ++ + R+ F F F ++ A++ + +F ++
Sbjct: 278 YNSLLATLAKAGNMDRVWKLMKEMS-RKGFHPDAFSFNTIMDALGKANKPDAAREVFARM 336
Query: 143 ------PKF-----------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
P R A ++L M+ GF + KT + ++ + D
Sbjct: 337 VESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLAT--DG 394
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
DE ++EM+ G +V Y ++ L K+ + A + QMK G++PD + Y
Sbjct: 395 QVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYA 454
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
+ ++G+ + +A LF ++ +G D Y + I + + E
Sbjct: 455 VRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 132/245 (53%), Gaps = 2/245 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT++I + + +A ++ +MK G+ PD V Y +LNG+ Q + +L +
Sbjct: 162 VITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLE 221
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G PD ++YN + LC+ E K++ M E PDV+TYN+L+ CKV
Sbjct: 222 EMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVS 281
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ L+++M + + TY+ +I G + + +A ++E+ G+ ++
Sbjct: 282 KMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYN 341
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ GLC+ G + +A ELL+ M +KD +P + ++L++ + KL V+ + + L++ +L
Sbjct: 342 CLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTY-SILVNGLCKLGKVDDARL-LLEMML 399
Query: 446 NTPCK 450
C+
Sbjct: 400 ERGCQ 404
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 171/354 (48%), Gaps = 28/354 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AY+ ++ L + +Q ++S +L+ + + E F + ++ ++ +++++
Sbjct: 195 PDTVAYNALLNGLCKQNQLEEVSKLLEEMVE-AGREPDTFSYNTVVACLCESGKYEEAGK 253
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+ K+ + + G + N ++ DGFC K DE +++M
Sbjct: 254 ILEKMIE---KKCGPDVVTYNSLM-DGFCKVSKM----------------DEAERLLEDM 293
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
++ YT +I + +++ DA ++ M GI PD+V Y +L+G+
Sbjct: 294 VGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKL 353
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A EL + ++ PDV TY++ +NGLCK V+ ++ M E G +P+++T+NT+
Sbjct: 354 EEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM 413
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ CK +++ ++++ MK ++ TYS +IDG + +A +L + +K
Sbjct: 414 IDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKA- 472
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+ SSM + GLC G V +A E++ M + P + + AL++ + ++
Sbjct: 473 -SYSSMLE----GLCSTGKVEEAQEVMDLMTKQGCPPTSSHY-ALIIGGLCDVE 520
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ N + A +++ M G D + +L+ +C+Q L +E+ ++EM + G
Sbjct: 174 QTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQL--EEVSKLLEEMVEAGREPD 231
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y V+ L + K +A IL +M PD+V Y +++G +AE L +
Sbjct: 232 TFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLE 291
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ P V TY I G + + + +++ M + G PD++TYN LL LCK
Sbjct: 292 DMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAG 351
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L EL++ M K ++ TYSI+++GL G + +A LLE L +G F+
Sbjct: 352 KLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFN 411
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ G V + ++L+ M + +P + L+
Sbjct: 412 TMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLI 449
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 23/269 (8%)
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
N MI DGFC GK DE ++ MK++ +V Y+ +I
Sbjct: 410 FNTMI-DGFCKAGKV----------------DEGHKVLELMKEVSCTPDVVTYSTLIDGY 452
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K ++ DA IL GI PD Y+ +L G+ +A+E+ D + G P
Sbjct: 453 CKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTS 506
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
Y + I GLC + +KM+ M E G +P++ TY+ L+ LCK + + ++
Sbjct: 507 SHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDV 566
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M KG V ++ TY+ +IDG + A + + G ++ I G CQ G
Sbjct: 567 MLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGN 626
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLS 425
V KA+E+++ M +K +P A + +L+ S
Sbjct: 627 VEKAIEVMQLMLEKGCNPDAATYFSLMRS 655
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 6/213 (2%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P Y ++++G+ + +A +L DE++ PD YN I GLCK ++A +
Sbjct: 90 PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M E PDVITY +L+ C+ L+ R+L+++MK G+ + Y+ +++GL
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+ + E LLEE + G + ++ + LC+ G +A ++L++M +K P
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVT 269
Query: 419 WEALL--LSSVSKLDFVNTSFIRLVDQILNTPC 449
+ +L+ VSK+D RL++ ++ C
Sbjct: 270 YNSLMDGFCKVSKMDEAE----RLLEDMVGRRC 298
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 4/278 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +EI N M+ F D T + IL + C+ DL D L + K+
Sbjct: 36 RAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDL--DRALSHFR--GKMWCSPT 91
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I L + +++ +A +L++M PD Y ++ G+ A +
Sbjct: 92 AFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLK 151
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L VPDV TY I G C+ N ++ K++ M+E G PD + YN LL LCK
Sbjct: 152 MMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQN 211
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + +L++EM G + +Y+ ++ L G EA +LE+ + K ++
Sbjct: 212 QLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYN 271
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C+ + +A LL+ M + +P + L+
Sbjct: 272 SLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI 309
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 126/286 (44%), Gaps = 29/286 (10%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
C+P ++ +I + + + VL+ + +E TP+ + + LI Y A+R Q
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGKVDEGHKVLELM--KEVSCTPDVVTYSTLIDGYCKANRMQ 459
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
D+ + P ++ ++ + +G C GK +E
Sbjct: 460 DAFAILGISP----DKASYSSML------EGLCSTGKV----------------EEAQEV 493
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ M K G Y +I L E+ +AL +L M G +P++ Y++++NG+
Sbjct: 494 MDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCK 553
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ A + D +L G VPDV TY I+G CK N ++A + M + G +PD +
Sbjct: 554 TKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLA 613
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
YN L+ C+ + + E+++ M KG + TY ++ L ++
Sbjct: 614 YNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P TY I G + N + +++ M PDVIT+NT+L+A C++ +L+R
Sbjct: 22 PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ W TY I+I GL I EA LL+E + K +++++ I GLC+
Sbjct: 82 FRGKMW--CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLS 425
G + A +LK M ++ P + +L++
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVG 171
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
SKP TY L+ + + E+ EM + ++ T++ ++ GD+ A
Sbjct: 20 SKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA- 78
Query: 367 GLLEEALNKGLCTQSSMFDETIC----GLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
L K C+ ++ T C GLCQ + +A +LL +M KD P A V+ L
Sbjct: 79 --LSHFRGKMWCSPTAF---TYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCL 133
Query: 423 L--LSSVSKLD 431
+ L + K+D
Sbjct: 134 IAGLCKMGKID 144
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 126/254 (49%), Gaps = 2/254 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G C + T S+++ S C + ++ D +GF+ +M K F + Y ++I K
Sbjct: 218 MGEKGLCANHITYSILIDSFCRRGEM--DNAIGFLDKMTKASIEFTVYPYNSLINGYCKL 275
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
A ++M G+ P +V YT +++G + ++ KA ++++E+ G+ P+ YT+
Sbjct: 276 GNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTF 335
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+GLC+ N + I++ M+E P +TYN +++ C+ ++ L+ EM
Sbjct: 336 TAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVG 395
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG V + TY +I GL S G + EA +++ + + + G C+ G +
Sbjct: 396 KGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKD 455
Query: 400 ALELLKQMADKDVS 413
A+ + M ++ V+
Sbjct: 456 AVSACRVMVERGVA 469
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A+EI NC++ G L + V + ELL +EM + G C +
Sbjct: 181 RIWEALEIKNCLMQKG---------LEANVVTYYGKFNEAELL--FKEMGEKGLCANHIT 229
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I S ++ ++ +A+G L++M I+ + Y ++NG + A+ FDE++
Sbjct: 230 YSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMI 289
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P V TY I+G C + K+ M G P+ T+ ++ LC+ +
Sbjct: 290 DKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMA 349
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L EMK + I+ + TY++MI+G G+I EA LL+E + KG + + I
Sbjct: 350 EAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLI 409
Query: 389 CGLCQRGLVRKALELLKQM 407
GLC G V +A E + +
Sbjct: 410 SGLCSVGRVSEAKEFVDDL 428
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + A +L+ M+ GF D T ++S +C +S E FV ++ K
Sbjct: 379 RSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVS--EAKEFVDDLHKDHHKLN 436
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+ ++ K+ + DA+ M G+ D+VCY ++++G + D L
Sbjct: 437 NMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLK 496
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL PD Y I+ K N++ + M + G P+V+TY L+ LCK
Sbjct: 497 EMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAG 556
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ L KE + N TY +D L G++ +A L A+ KG + ++
Sbjct: 557 LMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQ-LHHAMLKGFLATTVSYN 615
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I G C+ G + +A +LL M D D+ P
Sbjct: 616 ILIRGFCRLGKIEEATKLLHGMTDNDILP 644
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 22/330 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y +I L + + +D + K ++ + + L+ Y RF+D
Sbjct: 400 PDTYTYRPLISGLCSVGRVSEAKEFVDDLHK-DHHKLNNMCYSALVHGYCKEGRFKD--- 455
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
A+ M+ G +D ++++ + D + L G ++EM
Sbjct: 456 ---------------AVSACRVMVERGVAMDLVCYAILIDGTAREHDTRA--LFGLLKEM 498
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
G V YTN+I K + +A G+ + M +G P++V YT ++NG+
Sbjct: 499 HNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLM 558
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
KAE L E LV + P+ TY +++ L + N+E +++ M + G ++YN L
Sbjct: 559 DKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNIL 617
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++ C++ ++ +L+ M I+ + TYS +I + ++ EA L L+KGL
Sbjct: 618 IRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGL 677
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQM 407
+ + + G C G + KA EL +M
Sbjct: 678 KPDTLAYSFLVHGCCIAGELEKAFELRDEM 707
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI+ G T + ++S C + + + EM G +T +I L +
Sbjct: 288 MIDKGLTPTVVTYTSLISGYCNEGEWH--KAFKVYNEMTAKGISPNTYTFTAIISGLCRA 345
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A+ + +MK I P V Y +++ G + +A L DE++ G VPD YTY
Sbjct: 346 NMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTY 405
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+GLC V + + + + K + + Y+ L+ CK + M
Sbjct: 406 RPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVE 465
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ ++L Y+I+IDG A + D GLL+E N GL + ++ I + G +++
Sbjct: 466 RGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKE 525
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L M D+ P + AL+
Sbjct: 526 AFGLWDIMVDEGCLPNVVTYTALI 549
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 121/286 (42%), Gaps = 30/286 (10%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S ++ S+CE +D + + + E + +V Y +I L K ++++AL I N +
Sbjct: 135 SAVVRSLCELKDFNKAKEMIHWMEFNQCKL--SIVVYNVLIHGLCKSRRIWEALEIKNCL 192
Query: 233 KSDGIKPDIVCYTMVLNGV--------------------IVQEDYVKAEEL------FDE 266
G++ ++V Y N I+ + + + E+ D+
Sbjct: 193 MQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDK 252
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + VY YN ING CK N A M + G P V+TY +L+ C E
Sbjct: 253 MTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGE 312
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ ++ EM KGI N T++ +I GL + EA L E + + ++
Sbjct: 313 WHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNV 372
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKL 430
I G C+ G + +A LL +M K P + L+ L SV ++
Sbjct: 373 MIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRV 418
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 26/218 (11%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
MK + P++ + +LNG++ + LFD+++ + PD+Y Y+ + LC+ +
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL------------------------ 327
+MI ME K ++ YN L+ LCK R +
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206
Query: 328 --NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
N L KEM KG+ N TYSI+ID +G++ A G L++ + ++
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ G A +M DK ++P + +L+
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLI 304
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 3/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + + M+++G + T + +++ +C+ + ELL +E + Y
Sbjct: 526 AFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLS--KETLVSDVTPNHITYGCF 583
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L + + A+ + + M G V Y +++ G +A +L + +
Sbjct: 584 LDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDI 642
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD TY+ I CK++N++ IK+ M + G KPD + Y+ L+ C EL + E
Sbjct: 643 LPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFE 702
Query: 333 LVKEMKWKGIVLNLQT 348
L EM +G+ N T
Sbjct: 703 LRDEMIRRGMRSNHVT 718
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 141/275 (51%), Gaps = 8/275 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLG-FCFGMVDYT 210
A+++ N I+ G +D T + I+S +C E R + +LL ++E KKLG C+ Y
Sbjct: 318 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEE-KKLGPDCY---TYN 373
Query: 211 NVIRSLVKKE-KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++ +L E +V A N+M KPD+ ++L G+ + A +LF+ +
Sbjct: 374 AILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWIS 433
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL-GSKPDVITYNTLLQALCKVRELN 328
G D TYN I+GLCK+ E ++A MEE G PD TYNT++ C+ ++
Sbjct: 434 KGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVE 493
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ + +M K +L T +I++ GL +G +++A L ++KG + ++ I
Sbjct: 494 KAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTII 553
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G +A +LL +M +K + P + A+L
Sbjct: 554 SGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAIL 588
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 139/293 (47%), Gaps = 3/293 (1%)
Query: 135 SVNLFYKIPKFRI-NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
S +F + KF + N++ AI ++ M + D + + IL + R +D+ +
Sbjct: 192 SKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDK 251
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ E+ + G + Y +I ++ +V A N+M KPD+ ++L G+
Sbjct: 252 LNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCT 311
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ A +LF+ + G D TYN I+GLCK+ E ++A MEE PD T
Sbjct: 312 EGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYT 371
Query: 314 YNTLLQALCKVR-ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
YN +L AL ++ + + +M K +L T +I++ GL ++G + A L
Sbjct: 372 YNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTW 431
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD-VSPGARVWEALLL 424
++KG + ++ I GLC+ G +A +LL +M +K+ + P + ++L
Sbjct: 432 ISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIIL 484
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI-------------------- 252
I + V + A I N+MK +KP+++ ++N ++
Sbjct: 142 IGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIK 201
Query: 253 --VQEDYVKAEELFDELLVLGLVPDVYTYNVYIN--GLCKQNNVEAGIKMIACMEELGSK 308
V+ +A L ++ PD +YN ++ LC+ + I + + E G
Sbjct: 202 FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLV 261
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P ITYNT++ C+ ++ + + +M K +L T +I++ GL ++G + A L
Sbjct: 262 PHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKL 321
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++KG + ++ I GLC+ G +A +LL +M +K + P + A+L
Sbjct: 322 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAIL 376
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 38/178 (21%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK------------- 199
A+++ N I+ G +D T + I+S +C++ +E + EM++
Sbjct: 424 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRF--EEAFDLLAEMEEKNGLVPDQTTYNT 481
Query: 200 --LGFCF-GMVD----YTN----------------VIRSLVKKEKVFDALGILNQMKSDG 236
LG+C G V+ + N ++R L ++ + AL + N S G
Sbjct: 482 IILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKG 541
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
D V Y +++G+ + + +A +L E+ L PD YTYN + L +EA
Sbjct: 542 KAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRMEA 599
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M++DG + T ++++ ++C + E L +++M+ G +V Y +
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGH--RKEALSILRDMRGAGCGPNVVTYNTL 191
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + + +V A ++ M G+KP++V + ++NG+ A ++FDE++ GL
Sbjct: 192 VAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGL 251
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD +YN + G CK + + A M + G PDV+T+ +L+ +CK L
Sbjct: 252 APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVT 311
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LV++M+ +G+ +N T++ +IDG KG + +A + + ++ I G C
Sbjct: 312 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYC 371
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + +A ELL +M K + P + ++
Sbjct: 372 MVGRMDEARELLHEMEAKGLKPDVVTYSTII 402
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 135/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + M G D T + ++ +C+ +L + + V++M++ G V +T +
Sbjct: 274 ALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL--EWAVTLVRQMRERGLQMNEVTFTAL 331
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I KK + DAL + M+ IKP +VCY ++NG + +A EL E+ GL
Sbjct: 332 IDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 391
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY+ I+ CK + + ++ M E G PD ITY++L++ LC+ + L+
Sbjct: 392 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHV 451
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K M G+ + TY+ +IDG +G++ A L ++ + G+ + I GL
Sbjct: 452 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLS 511
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +A +LL ++ ++ P ++AL+
Sbjct: 512 KSARAMEAQQLLFKLYHEEPIPANTKYDALM 542
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + +++ + K K+ DA + ++M +G+ PD V Y ++ G +A +F
Sbjct: 220 LVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFA 279
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G++PDV T+ I+ +CK N+E + ++ M E G + + +T+ L+ CK
Sbjct: 280 EMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKG 339
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L+ V+ M+ I ++ Y+ +I+G G + EA LL E KGL +
Sbjct: 340 FLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYS 399
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I C+ A EL +QM +K V P A + +L+
Sbjct: 400 TIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 2/279 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
FR V A ++ M++ G + T + +++ +C+ + ++ EM + G
Sbjct: 196 FRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKM--EDARKVFDEMMREGLAP 253
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y ++ K +AL + +M GI PD+V +T +++ + + A L
Sbjct: 254 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLV 313
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ GL + T+ I+G CK+ ++ + + M + KP V+ YN L+ C V
Sbjct: 314 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMV 373
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ REL+ EM+ KG+ ++ TYS +I D A L ++ L KG+ + +
Sbjct: 374 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 433
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC+ + A L K M + P + +L+
Sbjct: 434 SSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 102/209 (48%), Gaps = 6/209 (2%)
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
SL + FD+ M SDG+ P++ Y +++ + + +A + ++ G P
Sbjct: 130 SLTSARRFFDS------MLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGP 183
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+V TYN + + V+ +++ M + G KP+++T+N+++ +CK ++ R++
Sbjct: 184 NVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 243
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
EM +G+ + +Y+ ++ G G EA + E KG+ F I +C+
Sbjct: 244 DEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 303
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G + A+ L++QM ++ + + AL+
Sbjct: 304 GNLEWAVTLVRQMRERGLQMNEVTFTALI 332
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 52/321 (16%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ A E+L+ M G D T S I+S+ C+ D S L Q+M + G
Sbjct: 373 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN--QQMLEKGVLPDA 430
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y+++IR L +++++ DA + M G++PD YT +++G + + +A L D+
Sbjct: 431 ITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDK 490
Query: 267 LLVLGLVPDVYTYNVYINGL----------------------------------CKQNNV 292
++ G++PDV TY+V INGL C++ +
Sbjct: 491 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAEL 550
Query: 293 EAGIKMIA--CMEELGSKPDVI--------------TYNTLLQALCKVRELNRLRELVKE 336
++ + ++ CM+ L ++ D + Y+ L+ C+ + + K+
Sbjct: 551 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 610
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M +G N + +I GL G ++EA ++++ LN + I G
Sbjct: 611 MLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGN 670
Query: 397 VRKALELLKQMADKDVSPGAR 417
V L++L MA + P R
Sbjct: 671 VDAVLDVLHGMAKDGLLPSPR 691
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P V+ YN +L AL L R M G+ N+ TY+I+I L +G EA
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L + G ++ + + G V A L+ M D + P + +++
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMV 227
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 154/338 (45%), Gaps = 40/338 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ L +I GF VD + +L +C + +SD + ++ M +LG +
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR-TSDAMDIVLRRMTQLGCIPNVF 163
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +++ L + + +AL +L M DG PD+V YT V+NG + D KA +
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM----------------------- 302
E+L G++P+V TY+ I LCK ++ ++++ M
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 303 ------------EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
G +PDV+TYN+L+ LCK R++ M +G+ + TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ G A+KG ++E GLL+ + G+ +F IC ++G V +A+ + +M +
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403
Query: 411 DVSPGARVWEAL--LLSSVSKLDFVNTSFIRLVDQILN 446
++P + + +L +++ F +++D+ L+
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 4/280 (1%)
Query: 148 NRVGFAIEILNCMINDGF-CV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
NR A+E+L M +DG C D + + +++ ++ DL D+ G EM G
Sbjct: 176 NRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPN 233
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+++I +L K + + A+ +L M +G+ P+ Y +++G +A
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ PDV TYN ++ LCK KM M + G KP++ TY TLLQ
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + L+ M GI N +SI+I A +G + +A + + +GL + +
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I LC+ G V A+ +QM D+ +SPG V+ +L+ S
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 142/295 (48%), Gaps = 37/295 (12%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ + LN +I G+C+ G+ E G ++EM +
Sbjct: 241 RISPTVVTLNSLIY-GYCIVGQF----------------KEAFGLLREMVLKNINPDVYT 283
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE------ 262
+ ++ +L K+ K+ +A + M +G+ PD+V Y+ +++G + + KA+
Sbjct: 284 FNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVI 343
Query: 263 --------------LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
LF E+ + PD TYN I+GLCK + +++ M + G
Sbjct: 344 NGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQP 403
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
D+ITYN+L+ ALCK +++ LVK++K +GI L++ TY+I+IDGL +G + +A +
Sbjct: 404 ADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVI 463
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ L KG + I GLC GL+ +A LL +M D P A E ++
Sbjct: 464 FQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETII 518
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 104/199 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ VI K + V AL + +M+ I PD V Y +++G+ A EL DE+
Sbjct: 339 YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMR 398
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G D+ TYN I+ LCK ++V+ I ++ +++ G + D+ TYN L+ LCK L
Sbjct: 399 DSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLK 458
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ + +++ KG L + TY+IMI+GL +G + EA LL + + G + + I
Sbjct: 459 DAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETII 518
Query: 389 CGLCQRGLVRKALELLKQM 407
L + +A +LL++M
Sbjct: 519 RALFENDKNERAEKLLREM 537
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 17/278 (6%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ ++ FA I ++ G+ + T + ++ C + E L F + LGF F
Sbjct: 118 HLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVK--EALHFHDHVLALGFHFN 175
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I L K + AL +L Q++ + D+V Y+ +++G+ + A EL+
Sbjct: 176 QVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYS 235
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ + P V T N I G C + ++ M PDV T+N L+ ALCK
Sbjct: 236 EMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEG 295
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + + M +G++ ++ TYS ++DG L +NK ++
Sbjct: 296 KIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYC-----------LVNEVNKA----KHVYS 340
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ +V KAL L +M + ++P + +L+
Sbjct: 341 IVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLI 378
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 115/236 (48%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+L+ M L ++++ ++ SLVK + + + Q++ +GIKP+IV +++
Sbjct: 53 DDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSIL 112
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+N A +F ++L +G P+ T + G C + V+ + + LG
Sbjct: 113 INCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGF 172
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ ++Y TL+ LCK+ E +++++++ K + ++ YS +IDGL + +A
Sbjct: 173 HFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYE 232
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E + K + + I G C G ++A LL++M K+++P + L+
Sbjct: 233 LYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILV 288
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 119/244 (48%), Gaps = 20/244 (8%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC 159
SS++D + ++ +I + +++LFY++ R R+ N
Sbjct: 320 SSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEM---RCRRIAPDTVTYNS 376
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
+I DG C G+ +S E V EM+ G ++ Y ++I +L K
Sbjct: 377 LI-DGLCKSGR-----ISYAWE-----------LVDEMRDSGQPADIITYNSLIDALCKN 419
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
V A+ ++ ++K GI+ D+ Y ++++G+ Q A+ +F +LL+ G V+TY
Sbjct: 420 HHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTY 479
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ INGLC + + +++ ME+ G PD +T T+++AL + + R +L++EM
Sbjct: 480 TIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIA 539
Query: 340 KGIV 343
+G++
Sbjct: 540 RGLL 543
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 140/282 (49%), Gaps = 4/282 (1%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
FA +L ++ GF ++ +L+L C+ D S + + MK+ V Y
Sbjct: 112 FAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGD--SHKAMDLFCMMKRNCLIPDCVSYNT 169
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI L K +++ +A + +MK KP+ V ++ +++G D + L +E+ +G
Sbjct: 170 VINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMG 229
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L DV+ Y+ I+G C + ++E G ++ M P+V+TY+ L+ ALCK ++
Sbjct: 230 LEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAA 289
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+++ M + ++ Y+++ DGL+ G +A +L+ + +G + ++ I GL
Sbjct: 290 QMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGL 349
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
C+ G V AL +L+ MA K P + L+ L V K+D
Sbjct: 350 CKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKID 391
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 172/373 (46%), Gaps = 24/373 (6%)
Query: 72 SIYNCEPPPE--AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADA 129
++ C+ P+ AY + L++N + D VLD + KR E + +I
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE-EPNNVTYNAIINGLCKE 352
Query: 130 HRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCV--DGK 170
R D++ + + K + ++ A+++LN +++ F + D
Sbjct: 353 GRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+L++ +C+QR L + + + M + GF +V Y +I + K+ AL +
Sbjct: 413 AFNLVIQELCKQRRLRHAKRVYYT--MVERGFPSNIVTYNILIDGYLSAGKLTKALELWK 470
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
GI P+ YT+++NG+ + A+ LF++ G P V YN + LC+++
Sbjct: 471 DAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRES 530
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+VE + M PDV+++N ++ K ++ +EL+ EM +V + T+S
Sbjct: 531 SVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFS 590
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+I+ G + EA L E ++ G + +FD + G +G K + +L+QMADK
Sbjct: 591 ILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADK 650
Query: 411 DVSPGARVWEALL 423
DV +++ +L
Sbjct: 651 DVVLDSKLTSTIL 663
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 169/354 (47%), Gaps = 30/354 (8%)
Query: 62 HILS--SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIF 119
H++S S + S S++ C A +I++ + VL I KR F + F
Sbjct: 77 HVISVHSKMASVSVFPCFTSLSA---LIESFVNTQKPSFAFGVLGLIMKR-GFHLNVYNF 132
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
L+K + + +++LF + + NC+I D CV T +++ +
Sbjct: 133 NLLLKGFCQSGDSHKAMDLFCMMKR-------------NCLIPD--CVSYNT---VINGL 174
Query: 180 CE-QRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
C+ +R + + EL +EMK G C V ++ +I K V + G+L +M+ G+
Sbjct: 175 CKGKRLVEAKELF---KEMKG-GECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGL 230
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+ D+ Y+ +++G + D + +ELF+E+L + P+V TY+ +N LCK+ + +
Sbjct: 231 EGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQ 290
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M+ M +PDV+ Y L L K + +++ M +G N TY+ +I+GL
Sbjct: 291 MLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLC 350
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+G + +A G+LE KG + + GLC G + +A++LL + K+
Sbjct: 351 KEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S ++ C+ D+ +E G ++EM+K+G + Y+ +I K + + N
Sbjct: 201 TFSALIDGFCKNGDV--EEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFN 258
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M + P++V Y+ ++N + ++ + +A ++ D + + PDV Y V +GL K
Sbjct: 259 EMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNG 318
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
IK++ M + G +P+ +TYN ++ LCK ++ +++ M KG ++ TYS
Sbjct: 319 RASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYS 378
Query: 351 IMIDGLASKGDIIEACGLLEEALNK----------------GLCTQSSM----------- 383
++ GL G I EA LL ++K LC Q +
Sbjct: 379 TLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMV 438
Query: 384 ----------FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G G + KALEL K D +SP A + L+
Sbjct: 439 ERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLI 488
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 165/353 (46%), Gaps = 21/353 (5%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
PEA + ++ Q + +E + + ++F LI Y ++ +D++
Sbjct: 30 PEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIEC- 88
Query: 140 YKIPKFRINRVGFAI--EILNCMIND-------GFCVDGKTC---------SLILSSVCE 181
Y++ K RV F ++L ++ GF D C ++++ C+
Sbjct: 89 YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCK 148
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+ ++ + + K G V + ++ ++ + + + N M++ G++PD+
Sbjct: 149 EGEIKLAQ--SVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDV 206
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y++++NG+ + A ELF+E+L GLVP+ T+ I+G CK V+ +++
Sbjct: 207 YTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQ 266
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M PD+ITYNTL+ LCK +L + ++L+ EM KG+ + TY+ +IDG +GD
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGD 326
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ A + + + + + I GLCQ G A ++L++M + P
Sbjct: 327 LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 112/227 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ A + N+M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ +I M G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD +TY TL+ CK +L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +L+K+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 97/178 (54%), Gaps = 1/178 (0%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ +FD + GL P ++N +NG + +++ G ++ M+ G +PDV TY+ L+
Sbjct: 155 AQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK +++ EL EM G+V N T++ +IDG G + A + ++ L++ L
Sbjct: 215 GLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 274
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I GLC++G +++A +L+ +M+ K + P + L+ S + D + T+F
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGD-LETAF 331
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 113/232 (48%), Gaps = 4/232 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCF 204
R+ + + N M G D T S++++ +C++ + ++EL EM G
Sbjct: 183 RLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELF---NEMLDNGLVP 239
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L
Sbjct: 240 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+ + GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 300 DEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ L++E G
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 411
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+++ +A E+ N M+++G +G T + ++ C+ + D + ++M ++
Sbjct: 220 SKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLI 277
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L KK + A ++++M G+KPD V YT +++G + D A E +
Sbjct: 278 TYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRM 337
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++
Sbjct: 338 IKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397
Query: 328 NRLRELVKEMKWKGIVLNLQT 348
+L+KEM+ G V ++ T
Sbjct: 398 WTGSKLMKEMQRDGYVPSVVT 418
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 119/235 (50%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E L +EM G + Y + I L K ++ DA+ L+ M ++ + PD+V Y ++
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLI 381
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G + +KA LFDEL + L P + TYN ++GLC+Q +E ++ M G
Sbjct: 382 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD++TY L+ CK+ L+ +E EM +G+ L+ Y+ I G GD A L
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EE L KG +++ + GLC+ G + +A ELL++M V P + +++
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 6/245 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + A E + M+++G +D + + V E + + +EM GF
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRI--VGELKLGDTSRAFSLQEEMLAKGFPPD 513
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y V+ L K + +A +L +M SDG+ PD V YT +++ + K E+F
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GL P V TY V I+G + +E + M+E G P+VITYN+L+ LCKVR
Sbjct: 574 EMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVR 633
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL----CTQS 381
+++ EM KGI N +Y+I+I+ + G+ EA L ++ L++G+ CT S
Sbjct: 634 RMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHS 693
Query: 382 SMFDE 386
++ +
Sbjct: 694 ALLKQ 698
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 172/409 (42%), Gaps = 55/409 (13%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL C P Y+ +I L++ +F ++ + K + + + LI Y
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLK-TGLKVSAYTYNPLIYGY 314
Query: 127 ------ADAHRFQDSVNLFYKIPKF-----------RINRVGFAIEILNCMINDGFCVDG 169
A+A Q+ + L P ++ R+ A++ L+ M+ + D
Sbjct: 315 FNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDV 374
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+ + ++ C +L LL E++ + +V Y ++ L ++ ++ A +
Sbjct: 375 VSYNTLIYGYCRLGNLMKAFLL--FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD------------------------ 265
+M ++GI PDIV YT+++NG A+E FD
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492
Query: 266 -----------ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
E+L G PD+ YNV ++GLCK N+E +++ M G PD +TY
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+++ A + L + RE+ EM KG+ ++ TY+++I G A KG + A E
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KG+ ++ I GLC+ + +A +M +K + P + L+
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 128/276 (46%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V +++L+ M G + T +++++ + ++ + ++ G + EM K G
Sbjct: 248 GKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEF--EQAKGLIGEMLKTGLKVSAY 305
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I K + +AL + +M G P + Y + G+ A + ++
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L L+PDV +YN I G C+ N+ + + + P ++TYNTLL LC+ EL
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++L EM +GI ++ TY+I+++G G + A +E L++GL S +
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G +A L ++M K P ++ ++
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVV 521
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 136/273 (49%), Gaps = 2/273 (0%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
+ + + MI D K C+ IL + +DL S + + + M + G +V Y ++
Sbjct: 184 LSVFDKMIKSRLSPDVKNCNRILR-ILRDKDLMSKAVEVY-RTMGEFGIKPTIVTYNTLL 241
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
S K KV L +L++M+ G P+ V Y +++NG+ + ++ +A+ L E+L GL
Sbjct: 242 DSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLK 301
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
YTYN I G + + + + M G+ P V TYN+ + LCK+ ++ +
Sbjct: 302 VSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQ 361
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ +M ++ ++ +Y+ +I G G++++A L +E + L ++ + GLC+
Sbjct: 362 LSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR 421
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
+G + A +L +M ++ ++P + L+ S
Sbjct: 422 QGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%)
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
KK V L + ++M + PD+ +L + ++ KA E++ + G+ P +
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYN ++ CK V+ G+ +++ M+ G P+ +TYN L+ L K E + + L+ EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
G+ ++ TY+ +I G +KG + EA L EE + KG + ++ I GLC+ G +
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
A++ L M ++ P + L+
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLI 381
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 132/319 (41%), Gaps = 10/319 (3%)
Query: 107 EKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFC 166
E + F EF+F +++ A + + + + ++ ++R I++ +I G C
Sbjct: 106 ESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR------IVDVLI--GGC 157
Query: 167 VDGKTCSLILSSVCEQRDLSS--DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
V + IL + S ++ L +M K + + ++R L K+ +
Sbjct: 158 VSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSK 217
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A+ + M GIKP IV Y +L+ + +L E+ G P+ TYNV IN
Sbjct: 218 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GL K+ E +I M + G K TYN L+ L L +EM KG
Sbjct: 278 GLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASP 337
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ TY+ I GL G + +A L + L L ++ I G C+ G + KA L
Sbjct: 338 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397
Query: 405 KQMADKDVSPGARVWEALL 423
++ + P + LL
Sbjct: 398 DELRSIYLFPTIVTYNTLL 416
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 2/198 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ GF D ++++ +C+ +L +E +Q+M G V YT++I + ++
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNL--EEASELLQKMVSDGVIPDYVTYTSIIHAHLEN 562
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ I +M S G+ P +V YT++++G + +A F E+ G++P+V TY
Sbjct: 563 GRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITY 622
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N INGLCK ++ A M E G P+ +Y L+ C + L K+M
Sbjct: 623 NSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLD 682
Query: 340 KGIVLNLQTYSIMIDGLA 357
+G+ + T+S ++ L
Sbjct: 683 RGVQPDSCTHSALLKQLG 700
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 164/357 (45%), Gaps = 23/357 (6%)
Query: 84 HFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF---- 139
HFV+ + S SSV I + + + F+F L+ Y + D++ F
Sbjct: 134 HFVVSRKGKGSA----SSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTK 189
Query: 140 ---YKIP----------KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
KIP +++ A+E +++ G+ + T +++++ +C++ +
Sbjct: 190 KHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVK 249
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+L+ E++K G V + +I K + + + M+ + PD+ Y+
Sbjct: 250 DAQLI--FDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSA 307
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ + A LF E+ GLVP+ T+ ING CK V+ +++ M G
Sbjct: 308 LIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKG 367
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
K D++ YNTL+ LCK R+ V EM +G++ + TY+ ++DG +GD+ A
Sbjct: 368 LKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELAL 427
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +E + +G+ + F I GLC+ G + A L++M + P + ++
Sbjct: 428 EMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVM 484
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 170/380 (44%), Gaps = 41/380 (10%)
Query: 72 SIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYAD-AH 130
S+ N P +A+HF I + +N F S+L F D + +Y +H
Sbjct: 64 SLKNILPSFKAHHF-ISLVNQNPYFLPPKSLLS--------------FFDFLSSYPTFSH 108
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK-TCSLILSSVCEQRDLSSDE 189
Q ++ + + R+N+ A +L+ +++ GK + S + +S+ E + S
Sbjct: 109 TVQSYCSMVHFLIAHRMNQQ--AESLLHFVVSR----KGKGSASSVFASILETKGTLSSS 162
Query: 190 LL--GFVQEMKKLGF------CFGMVDYTNV----------IRSLVKKEKVFDALGILNQ 231
+ + + G+ CF + N+ + ++K AL +
Sbjct: 163 FVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLE 222
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
+ G P++ + +++N + + A+ +FDE+ GL P ++N ING CK N
Sbjct: 223 ILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN 282
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+E G ++ MEE PDV TY+ L+ LCK +L L KEM +G+V N T++
Sbjct: 283 LEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I+G G + A + ++ KGL +++ I GLC+ G R+A + + +M +
Sbjct: 343 LINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRG 402
Query: 412 VSPGARVWEALLLSSVSKLD 431
+ P + LL S + D
Sbjct: 403 LIPDKFTYTTLLDGSCKEGD 422
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 23/347 (6%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP Y F ++ L + + D + D I K + F LI Y + ++
Sbjct: 229 PPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRK-TGLQPTAVSFNTLINGYCKSGNLEEGF 287
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
L + +FR+ F + DG C + C+ D + +E
Sbjct: 288 RLKMVMEEFRV----FPDVFTYSALIDGLCKE-----------CQLEDANH-----LFKE 327
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M G V +T +I K +V AL I QM + G+K D+V Y +++G+
Sbjct: 328 MCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGY 387
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ +A + E+ GL+PD +TY ++G CK+ ++E ++M M + G + D + +
Sbjct: 388 FREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTA 447
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LC+ ++ ++EM G+ + TY++++DG KGD+ LL+E + G
Sbjct: 448 IISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDG 507
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + GLC++G V+ A LL M + V P + LL
Sbjct: 508 HIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILL 554
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 100/198 (50%), Gaps = 5/198 (2%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G D T + +L C++ DL + L +EM K G V +T +I L +
Sbjct: 398 MTKRGLIPDKFTYTTLLDGSCKEGDL--ELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ DA L +M G+KPD YTMV++G + D +L E+ G +P V TY
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITY 515
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
NV +NGLCKQ V+ ++ M LG PD ITYN LLQ CK +L + + EM
Sbjct: 516 NVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM-- 573
Query: 340 KGIVLNLQTYSIMIDGLA 357
G+V + +Y ++ L+
Sbjct: 574 -GLVSDYASYRSLLHELS 590
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M G D + ++ +C+ E FV EM K G
Sbjct: 351 GRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFR--EARKFVGEMTKRGLIPDKF 408
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT ++ K+ + AL + +M +GI+ D V +T +++G+ V AE E+
Sbjct: 409 TYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREM 468
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L GL PD TY + ++G CK+ +V+ G K++ M+ G P VITYN L+ LCK ++
Sbjct: 469 LRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQV 528
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
L+ M G+V + TY+I++ G G +
Sbjct: 529 KNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKL 563
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 154/338 (45%), Gaps = 40/338 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ L +I GF VD + +L +C + +SD + ++ M +LG +
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR-TSDAMDIVLRRMTQLGCIPNVF 163
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +++ L + + +AL +L M DG PD+V YT V+NG + D KA +
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM----------------------- 302
E+L G++P+V TY+ I LCK ++ ++++ M
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 303 ------------EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
G +PDV+TYN+L+ LCK R++ M +G+ + TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ G A+KG ++E GLL+ + G+ +F IC ++G V +A+ + +M +
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403
Query: 411 DVSPGARVWEAL--LLSSVSKLDFVNTSFIRLVDQILN 446
++P + + +L +++ F +++D+ L+
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 166/373 (44%), Gaps = 24/373 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S + +P Y +++ A ++ +LD + R ++F LI Y
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD-LMVRNGIHPNHYVFSILICAY 384
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
A + ++ +F K+ + +N RV A+ MI++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 170 KTCSLILSSVC--EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ ++ S+C ++ D + + +L EM G C + + ++I S K+ +V ++
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELIL----EMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ + M G+KPDI+ Y+ +++G + +A +L ++ +G+ PD TYN ING C
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + +E + + ME G PD+ITYN +LQ L + R +EL + G L L
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I++ GL EA + + L ++ F+ I L + G +A +L +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680
Query: 408 ADKDVSPGARVWE 420
+ + P R +
Sbjct: 681 SANGLVPDVRTYS 693
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 4/280 (1%)
Query: 148 NRVGFAIEILNCMINDGF-CV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
NR A+E+L M +DG C D + + +++ ++ DL D+ G EM G
Sbjct: 176 NRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPN 233
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+++I +L K + + A+ +L M +G+ P+ Y +++G +A
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ PDV TYN ++ LCK KM M + G KP++ TY TLLQ
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + L+ M GI N +SI+I A +G + +A + + +GL + +
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I LC+ G V A+ +QM D+ +SPG V+ +L+ S
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L M+ +G + +T + I+ C E +GF+++M G +V Y ++
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ--PKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A + + M G+KP+I Y +L G + V+ L D ++ G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY------------------ 314
P+ Y +++ I KQ V+ + + + M + G PD +TY
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 315 -----------------NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
N+L+ +LC + ++ +EL+ EM +GI L+ ++ +ID
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+G +IE+ L + + G+ + I G C G + +A +LL M + P
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 418 VWEALL 423
+ L+
Sbjct: 551 TYNTLI 556
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E++ M++ G C+D + I+ S C E R + S++L M ++G ++ Y+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL---MVRIGVKPDIITYST 519
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K+ +A +L M S G+KPD V Y ++NG A LF E+ G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD+ TYN+ + GL + A ++ + E G++ ++ TYN +L LCK +
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + + + L +T++IMI L G EA L GL + L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
++GL+ + +L M + + +R+ +++ + + D +++ ++D+
Sbjct: 700 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCF 204
+I+R+ A+ + M + G D T ++IL + + +R ++ EL + E G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES---GTQL 617
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++ L K +AL + + ++ + + +++ ++ +A++LF
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L GLVPDV TY++ L +Q +E + MEE G + N++++ L +
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
++ R + + K L T S+ +D L+
Sbjct: 738 GDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 133/270 (49%), Gaps = 10/270 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG----FVQEMKKLGFCFGMVD 208
A+E+ M++DG C + TC++++ S++ L+G F+ ++++ G +
Sbjct: 442 ALEVFELMVSDGICPNVVTCTILVHG------FSNEGLIGEAFLFLDKVRQFGVVPSLCT 495
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K D GI M G PD V Y+++++G + D +A L+ +++
Sbjct: 496 YRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMV 555
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P+++TY INGLC + + + + M G PD I Y +L+ CK +
Sbjct: 556 DEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMK 615
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E+ +EM+ +G+ + Y+ +I G + + A +EE +NKGL + + I
Sbjct: 616 AALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLI 675
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + G +KA+ + M ++P A++
Sbjct: 676 VGYFKIGDEKKAMAMYNSMLQAGIAPDAKL 705
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 4/288 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R RV A E+ + + GF D S++L C+ DL + +M F
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDL--EICYDLWNDMVHHNFVPD 422
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+Y+++I + + ++ +AL + M SDGI P++V T++++G + +A D
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLD 482
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+VP + TY V I+GLCK N + A M + G PD + Y+ ++ K
Sbjct: 483 KVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L L +M +G N+ TY+ +I+GL + E L + + +GL ++
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYT 602
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
I C+R ++ ALE+ ++M + +S + V+ L+ S V +D
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMD 650
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 141/308 (45%), Gaps = 41/308 (13%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AIE+ + M GF D + S+++ +C+Q D+ + + + EM + G +V Y+++
Sbjct: 302 AIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYM--LVEMARNGITPNLVSYSSL 359
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L + +V A + ++K G K D + Y++VL+G D +L+++++
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACM------------------------------ 302
VPD Y Y+ I C+ ++ +++ M
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFL 479
Query: 303 -----EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ G P + TY ++ LCKV + N + + +M +G V + YSI+IDG
Sbjct: 480 FLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFV 539
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDET--ICGLCQRGLVRKALELLKQMADKDVSPG 415
D+ EA L + +++G T+ ++F T I GLC + + + L K M + ++P
Sbjct: 540 KALDLQEAFRLYYKMVDEG--TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPD 597
Query: 416 ARVWEALL 423
++ +L+
Sbjct: 598 RILYTSLI 605
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 1/232 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y + L ++V A L + G + C+ V++G KA E+FD +
Sbjct: 251 YATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMK 310
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G VPDV++Y++ ++GLCKQ +V G M+ M G P++++Y++LL LC+ +
Sbjct: 311 KCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVE 370
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL K +K +G + YSI++ G D+ L + ++ + + I
Sbjct: 371 LAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLI 430
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
C+ +++ALE+ + M + P V +L+ S + +F+ L
Sbjct: 431 YAYCRHRQLKEALEVFELMVSDGICPNV-VTCTILVHGFSNEGLIGEAFLFL 481
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 149/338 (44%), Gaps = 20/338 (5%)
Query: 106 IEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNC--- 159
+E N TP + + L+ A R + + LF ++ F+ + + ++I + C
Sbjct: 342 VEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQH 401
Query: 160 ------------MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
M++ F D S ++ + C R L E L + M G C +V
Sbjct: 402 LDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLK--EALEVFELMVSDGICPNVV 459
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
T ++ + + +A L++++ G+ P + Y ++++G+ +F ++
Sbjct: 460 TCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADM 519
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G VPD Y++ I+G K +++ ++ M + G+KP++ TY +L+ LC +L
Sbjct: 520 IKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKL 579
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L K M +G+ + Y+ +I + ++ A + E +GL S ++
Sbjct: 580 PEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCL 639
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I G + + A +++M +K ++P + L++
Sbjct: 640 IGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVG 677
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 113/256 (44%), Gaps = 2/256 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ T + L +C + + S F+Q + + G+ + VI +V A+
Sbjct: 247 NAATYATYLYGLCHAKQVKS--AWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIE 304
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ + MK G PD+ Y+++++G+ Q D + + E+ G+ P++ +Y+ ++GLC
Sbjct: 305 VFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLC 364
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ VE ++ +++ G K D I Y+ +L C+ +L +L +M V +
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAY 424
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
YS +I + EA + E ++ G+C + G GL+ +A L ++
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484
Query: 408 ADKDVSPGARVWEALL 423
V P + ++
Sbjct: 485 RQFGVVPSLCTYRVII 500
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 112/217 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I + +V A I M+ + +P+ Y ++NG + + A +F+E++
Sbjct: 269 YNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMI 328
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ PD +Y + LC+ NV+ GI ++ M + G K DV+TYN LL+ LCK R +
Sbjct: 329 RSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIA 388
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L++++ +G+ LN+ +Y I+++ L S G++ +A GLL L +G + + +
Sbjct: 389 EAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLL 448
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GLC G V A L + D P AR W L+ S
Sbjct: 449 IGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIES 485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKS---DGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I+ VKK + A + ++M+ ++P +V Y+ ++ G+ +A ELF+
Sbjct: 195 YNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFE 254
Query: 266 ELLVLG-LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ +VPD TYN+ I G C+ VE + M + +P+ Y TL+ CK
Sbjct: 255 DMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKK 314
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
E+ R + +EM G+ + +Y+ ++ L G++ E L++E KG +
Sbjct: 315 GEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTY 374
Query: 385 DETICGLCQRGLVRKALELLKQMADKDV 412
+ + GLC+ + +A+ LL+++ + V
Sbjct: 375 NLLLEGLCKDRRIAEAVTLLEKLPSEGV 402
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 153 AIEILNCMI-NDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYT 210
A E+ MI D D T +L++ C + + + GF+++ + F +Y
Sbjct: 249 AFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAF---NYA 305
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I KK +V A G+ +M G++PD V YT ++ + + + L E+
Sbjct: 306 TLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQK 365
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G DV TYN+ + GLCK + + ++ + G + +V +Y ++ LC E+ +
Sbjct: 366 GCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKA 425
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ M +G V + ++++ GL G + +A L ++ G ++ + I
Sbjct: 426 AGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIES 485
Query: 391 LCQRGLVRKALELL 404
+ + +R+++ELL
Sbjct: 486 VFRERKLRRSIELL 499
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS---KPDVITYNTLLQALCKVRELNRL 330
P+ YN+ I K+ ++ ++ M ++ +P ++TY+TL+ LC+ ++
Sbjct: 190 PNTCIYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEA 249
Query: 331 RELVKEMKWKG-IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETI 388
EL ++M K IV + TY+++I G G + +A + + K C ++ + I
Sbjct: 250 FELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIF-GFMRKNECEPNAFNYATLI 308
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C++G V A + ++M V P A + +L+
Sbjct: 309 NGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLV 343
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 136/270 (50%), Gaps = 2/270 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ MI G D + + +++++C++ ++ + V++M++ G+ V Y ++
Sbjct: 4 ATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIG--HAMQLVEKMEENGYPTNTVTYNSL 61
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+R L + +L +L+++ G+ P+ Y+ +L + +A +L DE++ G
Sbjct: 62 VRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGW 121
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ +YNV + GLCK+ E I+ + G P+V++YN +L++LC +
Sbjct: 122 QPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQ 181
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ EM + +L TY+I+I LA G I A +L+E + ++ ++ I LC
Sbjct: 182 LLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLC 241
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ G + ++ L QM +P + A+
Sbjct: 242 KEGKLDLVIKCLDQMIHHRCNPNEGTFNAI 271
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 91/167 (54%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
KA + + ++ G++PD +Y +N LCK+ N+ ++++ MEE G + +TYN+L+
Sbjct: 3 KATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLV 62
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
+ LC LN+ +L+ ++ WKG+V N TYS +++ + + EA LL+E + KG
Sbjct: 63 RGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQ 122
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++ + GLC+ G +A+ + + K +P + +L S
Sbjct: 123 PNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRS 169
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 121/245 (49%), Gaps = 6/245 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
YT ++ +L K+ + A+ ++ +M+ +G + V Y ++ G+ + + ++ +L D+
Sbjct: 21 ASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDK 80
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L+ GLVP+ +TY+ + K+ V +K++ + G +P++++YN LL LCK
Sbjct: 81 LMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGR 140
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+++ KG N+ +Y+I++ L +G EA LL E ++ ++
Sbjct: 141 TEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNI 200
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQI 444
I L G + A E+L +M P A + ++ L KLD V I+ +DQ+
Sbjct: 201 LIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLV----IKCLDQM 256
Query: 445 LNTPC 449
++ C
Sbjct: 257 IHHRC 261
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 130/276 (47%), Gaps = 3/276 (1%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A+++L+ +I G+ + + +++L+ +C ++ ++E + F +++ GF +V Y
Sbjct: 106 VNEAMKLLDEIIAKGWQPNLVSYNVLLTGLC--KEGRTEEAIRFFRDLPSKGFNPNVVSY 163
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++RSL + + +A +L +M S+ P +V Y +++ + A E+ DE++
Sbjct: 164 NIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVR 223
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
P TYN I LCK+ ++ IK + M P+ T+N + LCK +
Sbjct: 224 ASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAI-AVLCKQGRVPE 282
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+++ + K Y +I L KG+ A LL E G + I
Sbjct: 283 AFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIR 342
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GLC G++ +ALE+ + + + D P + AL+L
Sbjct: 343 GLCIEGMLDEALEIFRLLEENDYRPILDNFNALILG 378
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A ++ M GI PD YT ++N + + + A +L +++ G + TYN +
Sbjct: 4 ATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVR 63
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLC N+ ++++ + G P+ TY+ LL+A K R +N +L+ E+ KG
Sbjct: 64 GLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQP 123
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
NL +Y++++ GL +G EA + +KG ++ + LC G +A +LL
Sbjct: 124 NLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLL 183
Query: 405 KQMADKDVSPGARVWEALLLS 425
+M ++ SP + L+ S
Sbjct: 184 AEMDSEERSPSLVTYNILIGS 204
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 3/225 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A E+L+ M+ F T + I++ +C++ L D ++ + +M C
Sbjct: 210 RIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKL--DLVIKCLDQMIH-HRCNPNEG 266
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
N I L K+ +V +A I+ + + Y V+ + + + A +L E+
Sbjct: 267 TFNAIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMT 326
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G VPD YTY+ I GLC + ++ +++ +EE +P + +N L+ CK +
Sbjct: 327 KFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTD 386
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
++++ M KG N TY+I+++G+A + + A +L+E L
Sbjct: 387 LSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKELL 431
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 38/299 (12%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMV 207
R AI + + GF + + ++IL S+C E R +++LL EM +V
Sbjct: 140 RTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLA---EMDSEERSPSLV 196
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV---------------I 252
Y +I SL ++ A +L++M KP Y ++ + +
Sbjct: 197 TYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQM 256
Query: 253 VQEDYVKAEELFDELLVL---GLVPDVYT----------------YNVYINGLCKQNNVE 293
+ E F+ + VL G VP+ ++ Y I LC++ N
Sbjct: 257 IHHRCNPNEGTFNAIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTY 316
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++ M + G PD TY++L++ LC L+ E+ + ++ L ++ +I
Sbjct: 317 PAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALI 376
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G G + +LE + KG + + + G+ A E+LK++ + V
Sbjct: 377 LGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKELLLRQV 435
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+++ R+ E++ E GI+ + +Y+ +++ L +G+I A L+E+ G T +
Sbjct: 1 MKKATRVMEMMIE---SGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVT 57
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQ 443
++ + GLC G + ++L+LL ++ K + P + + LL + K VN + ++L+D+
Sbjct: 58 YNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTY-SFLLEAAYKERGVNEA-MKLLDE 115
Query: 444 IL 445
I+
Sbjct: 116 II 117
>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
Length = 506
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 112/217 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I + +V A I M+ + +P+ Y ++NG + + A +F+E++
Sbjct: 269 YNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMI 328
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ PD +Y + LC+ NV+ GI ++ M + G K DV+TYN LL+ LCK R +
Sbjct: 329 RSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIA 388
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L++++ +G+ LN+ +Y I+++ L S G++ +A GLL L +G + + +
Sbjct: 389 EAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLL 448
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GLC G V A L + D P AR W L+ S
Sbjct: 449 IGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIES 485
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 5/254 (1%)
Query: 153 AIEILNCMI-NDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYT 210
A E+ MI D D T +L++ C + + + GF+++ + F +Y
Sbjct: 249 AFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAF---NYA 305
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I KK +V A G+ +M G++PD V YT ++ + + + L E+
Sbjct: 306 TLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQK 365
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G DV TYN+ + GLCK + + ++ + G + +V +Y ++ LC E+ +
Sbjct: 366 GCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKA 425
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ M +G V + ++++ GL G + +A L ++ G ++ + I
Sbjct: 426 AGLLGMMLGRGFVPHYAASNMLLIGLCDVGRVSDATVTLYGLVDTGFMPEARCWARLIES 485
Query: 391 LCQRGLVRKALELL 404
+ + +R+++ELL
Sbjct: 486 VFRERKLRRSIELL 499
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 138/258 (53%), Gaps = 2/258 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
VG A+E+++ + G+ D KT ++++ +C+ S E +G++++M++ + +V Y
Sbjct: 162 VGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTS--EAVGWLRKMEERNWNPNVVVY 219
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ V+ L K V +ALG+ +M GIKP++V YT ++ G+ + +A L DE++
Sbjct: 220 STVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMK 279
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+G++PD+ + N+ ++ LCK+ + +I M +G PDV TYN+L+ C +++
Sbjct: 280 MGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDE 339
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ + M +G + ++ Y+ +I G +I +A LL+E + G + I
Sbjct: 340 ATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIG 399
Query: 390 GLCQRGLVRKALELLKQM 407
G CQ G A EL M
Sbjct: 400 GFCQVGRPLAAKELFLNM 417
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 120/237 (50%), Gaps = 2/237 (0%)
Query: 180 CEQRDLSS-DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD-GI 237
C+ L S DE L F M K+ ++D+T ++ +VK + A+ ++ +M S GI
Sbjct: 48 CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
KPD +V+N + + + +L LGL P V T+ + INGLC + +V ++
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ +E+ G + DV TY L+ LCK+ + + +++M+ + N+ YS ++DGL
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G + EA GL E KG+ + I GLC G ++A LL +M V P
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 14/248 (5%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTN--------------VIRSLVKKEKVFDALGILNQMKSD 235
LLGF+ +MK +V + VI SL + V +L M
Sbjct: 81 LLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKL 140
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G++P +V +T+++NG+ V+ D +A EL D + G DV TY V INGLCK
Sbjct: 141 GLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEA 200
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ + MEE P+V+ Y+T++ LCK ++ L EM KGI NL TY+ +I G
Sbjct: 201 VGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQG 260
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L + G EA LL+E + G+ + + LC+ G + +A ++ M P
Sbjct: 261 LCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPD 320
Query: 416 ARVWEALL 423
+ +L+
Sbjct: 321 VFTYNSLI 328
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 4/219 (1%)
Query: 209 YTNVIRSLVKKEK---VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ N +R+ K K + +AL + M P ++ +T++L ++ + Y A L
Sbjct: 40 FLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVK 99
Query: 266 EL-LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ LG+ PD + NV IN LC V G ++ M +LG +P V+T+ L+ LC
Sbjct: 100 EMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVK 159
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ R ELV ++ G +++TY ++I+GL G EA G L + + ++
Sbjct: 160 GDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVY 219
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ GLV +AL L +M+ K + P + L+
Sbjct: 220 STVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLI 258
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 134/278 (48%), Gaps = 4/278 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A +L+ M+ G D ++ ++++ +C E + + + ++GF M +G + Y +
Sbjct: 270 AGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGF---MILVGEVPDVFTYNS 326
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I + ++ +A + M S G PDIV YT +++G ++ KA L DE++ +G
Sbjct: 327 LIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 386
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
PDV T+ I G C+ A ++ M + G P++ T +L LCK + L+
Sbjct: 387 FTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEAL 446
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L M+ + LN+ YSI++DG+ S G + A L KGL + I G
Sbjct: 447 SLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGF 506
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++GL+ KA +LL M + P + + + V++
Sbjct: 507 AKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAE 544
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ MI G D T + ++ C Q + DE + M G +V YT++
Sbjct: 305 AKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQM--DEATRVFELMVSRGCLPDIVAYTSL 362
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K + + A+ +L++M G PD+V +T ++ G + A+ELF + G
Sbjct: 363 IHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQ 422
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VP++ T + ++GLCK + + + ME+ +++ Y+ +L +C +LN E
Sbjct: 423 VPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALE 482
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L + KG+ +N+ Y+IMI+G A +G + +A LL G S ++ + GL
Sbjct: 483 LFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLV 542
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++++ L M DK S A E ++
Sbjct: 543 AEREIARSIKYLTMMRDKGFSVDATTTEMII 573
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V F +L M+ G T +++++ +C + D+ + V ++K G+ + Y
Sbjct: 127 VAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVG--RAVELVDHVEKTGYRSDVKTY 184
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L K K +A+G L +M+ P++V Y+ V++G+ +A L E+
Sbjct: 185 GVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSG 244
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ P++ TY I GLC + ++ M ++G PD+ + N L+ LCK ++ +
Sbjct: 245 KGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQ 304
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ ++ M G V ++ TY+ +ID + + EA + E +++G + I
Sbjct: 305 AKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIH 364
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ + KA+ LL +M +P W L+
Sbjct: 365 GWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLI 398
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 5/218 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCF 204
+I + A+ +L+ MI GF D T + ++ C+ R L++ EL M K G
Sbjct: 368 KIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELF---LNMHKYGQVP 424
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ ++ L K + + +AL + + M+ + +IV Y+++L+G+ A ELF
Sbjct: 425 NLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELF 484
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L GL +VY Y + ING KQ ++ +++ MEE G PD TYN +Q L
Sbjct: 485 SCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAE 544
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS-KGD 361
RE+ R + + M+ KG ++ T ++I+ L++ +GD
Sbjct: 545 REIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGD 582
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+TC++IL +C+ + LS E L M+K +V Y+ ++ + K+ AL +
Sbjct: 427 QTCAIILDGLCKSQLLS--EALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELF 484
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+ + + G++ ++ YT+++NG Q KAE+L + G +PD TYNV++ GL +
Sbjct: 485 SCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAE 544
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ IK + M + G D T ++ L + N LRE +
Sbjct: 545 REIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 160/356 (44%), Gaps = 24/356 (6%)
Query: 115 PEFI-FIDLIKTYADAHRFQDSVNLFYKIPK--------FRINRVGF-----AIEILNCM 160
P+ + + LIK Y D +R +D++ L +P +GF IE + C+
Sbjct: 303 PDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCL 362
Query: 161 I-----NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ N D T + ++ + + +D+ L F++E + GF V Y+ ++ S
Sbjct: 363 MEKMVWNSNLIPDQVTYNTLIHMLSKHGH--ADDALAFLKEAQDKGFHIDKVGYSAIVHS 420
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+K ++ +A ++ M S G PD+V YT +++G +A+++ ++ G P+
Sbjct: 421 FCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPN 480
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+Y +NGLC +MI EE P+ ITY ++ L + +L+ +L +
Sbjct: 481 TVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTR 540
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG +++I L ++EA LEE LNKG F I G CQ G
Sbjct: 541 EMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIG 600
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILN-TP 448
+ AL +L M P A + AL L +LD ++++ + L+ TP
Sbjct: 601 DMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTP 656
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 118/226 (52%), Gaps = 12/226 (5%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI-VCYTMVLNGVIVQEDYV- 258
F + MV Y+ + K+ +AL +L M+ G++P + +C T + V+V+ +
Sbjct: 237 AFGYVMVSYS-------RAGKLRNALRVLTLMQKAGVEPSLSICNTTIY--VLVKGGKLE 287
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
KA + + + V G+ PD+ TYN I G C N +E +++IA + G PD ++Y T++
Sbjct: 288 KALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVM 347
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQ-TYSIMIDGLASKGDIIEACGLLEEALNKGL 377
LCK +++ ++ L+++M W ++ Q TY+ +I L+ G +A L+EA +KG
Sbjct: 348 GFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGF 407
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + CQ+G + +A L+ M + +P + A++
Sbjct: 408 HIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIV 453
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 155/346 (44%), Gaps = 24/346 (6%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
P Y+ ++ L++ ++ C + + + R E P F ++ +Y+ A + ++
Sbjct: 200 PVVYYTMLDVLSK-TKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRN----- 253
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
A+ +L M G C+ + + + L ++ L F++ M+
Sbjct: 254 -------------ALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKL--EKALKFLERMQV 298
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G +V Y ++I+ ++ DAL ++ + S G PD V Y V+ G + +E ++
Sbjct: 299 TGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVM-GFLCKEKKIE 357
Query: 260 AEELFDELLVL--GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+ E +V L+PD TYN I+ L K + + + + ++ G D + Y+ +
Sbjct: 358 EVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAI 417
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ + C+ ++ + LV +M +G ++ TY+ ++DG G I EA +L++ G
Sbjct: 418 VHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGC 477
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + GLC G +A E++ + +P A + A++
Sbjct: 478 KPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVM 523
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 171/400 (42%), Gaps = 31/400 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P +Y+ V+ L + + ++ +++ + N + + LI + H D
Sbjct: 335 GCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSK-HGHAD 393
Query: 135 SVNLFYKIPK---FRINRVGF---------------AIEILNCMINDGFCVDGKTCSLIL 176
F K + F I++VG+ A ++ M + G D T + I+
Sbjct: 394 DALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIV 453
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
C + DE +Q+M K G V YT ++ L K +A ++N +
Sbjct: 454 DGFCRLGRI--DEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHW 511
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK-QNNVEAG 295
P+ + Y V++G+ + +A +L E++ G P N+ I LC+ Q VEA
Sbjct: 512 WTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAK 571
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ C+ + G +V+ + T++ C++ ++ ++ +M G + TY+ + D
Sbjct: 572 KYLEECLNK-GCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDA 630
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L KG + EA L+ + L+KGL + I Q G V L LL++M + P
Sbjct: 631 LGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQ--PF 688
Query: 416 ARVWEALLLSSVSKL-DFVNTSFI-RLVDQILNTPCKMEG 453
V+ + + KL DF N +L+ ++L T K++
Sbjct: 689 RTVYNQV----IEKLCDFGNLEEAEKLLGKVLRTASKVDA 724
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 4/220 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A ++ M+ GF +L++ S+C+ + + E +++E G
Sbjct: 528 REGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVV--EAKKYLEECLNKGCAIN 585
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V++T VI + + AL +L+ M G PD V YT + + + + +A EL
Sbjct: 586 VVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIV 645
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++L GL P TY I+ + V+ + ++ M L +P YN +++ LC
Sbjct: 646 KMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKM--LKRQPFRTVYNQVIEKLCDFG 703
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
L +L+ ++ ++ T ++++ KG I A
Sbjct: 704 NLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISA 743
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 145/319 (45%), Gaps = 31/319 (9%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ----EMKKLGFCFGMV 207
+A ++L M+ G+ ++++ +C DL S E++G + EM ++G V
Sbjct: 29 YAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAERAYNEMLEMGVVLNKV 88
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ N R L K A ++ +M S G PD Y+ V+ + KA +LF E+
Sbjct: 89 NVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEM 148
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ PDVYTY ++ CK +E M++ G P+V+TY L+ A K R+L
Sbjct: 149 KRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKL 208
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK------------ 375
+R E+ + M G V N+ TY+ +IDG G+ +AC + N
Sbjct: 209 SRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFR 268
Query: 376 ---------GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--L 424
+ T ++ D GLC+ V++A +LL+ M+ + P +++AL+
Sbjct: 269 IVDSELKEPNVVTYGALVD----GLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGF 324
Query: 425 SSVSKLDFVNTSFIRLVDQ 443
V KLD F +++
Sbjct: 325 CKVGKLDEAQEVFTKMLGH 343
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 135/329 (41%), Gaps = 54/329 (16%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
I + A ++ M++ GF D T S ++ +C + ++ QEMK+ G +
Sbjct: 100 IGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKV--EKAFQLFQEMKRNGITPDV 157
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
YT ++ K + A ++M+ DG P++V YT +++ + +A E+F+
Sbjct: 158 YTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEM 217
Query: 267 LLVLGLVP--------------------------------------DVY----------- 277
+L G VP D+Y
Sbjct: 218 MLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEP 277
Query: 278 ---TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
TY ++GLCK + V+ ++ M G +P+ I Y+ L+ CKV +L+ +E+
Sbjct: 278 NVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVF 337
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M G N+ TYS +ID L + A +L + L ++ E + GLC+
Sbjct: 338 TKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKV 397
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G +A L+ M +K P + A++
Sbjct: 398 GKTDEAYRLMLMMEEKGCYPNVVTYTAMI 426
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ L K KV +A +L M +G +P+ + Y +++G +A+E+F
Sbjct: 279 VVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFT 338
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++L G P+VYTY+ I+ L K ++ +K++ M E P+V+ Y ++ LCKV
Sbjct: 339 KMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVG 398
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + L+ M+ KG N+ TY+ MIDG G + LL+ +KG +
Sbjct: 399 KTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYR 458
Query: 386 ETICGLCQRGLVRKALELLKQM 407
I C GL+ A +LL++M
Sbjct: 459 VLINHCCAAGLLDDAHKLLEEM 480
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 124/282 (43%), Gaps = 21/282 (7%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M DG + T + ++ + + R LS ++E+ + M G +V YT +I K
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIF---EMMLSNGCVPNIVTYTALIDGHCK 239
Query: 219 KEKVFDALGILNQMKSDGI-----------------KPDIVCYTMVLNGVIVQEDYVKAE 261
+ A I +MK+D + +P++V Y +++G+ +A
Sbjct: 240 AGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEAR 299
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+L + + + G P+ Y+ I+G CK ++ ++ M G P+V TY++L+ L
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
K + L+ +++ +M N+ Y+ M+DGL G EA L+ KG
Sbjct: 360 FKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNV 419
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G + G V + LELL+ M K +P + L+
Sbjct: 420 VTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLI 461
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 24/249 (9%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DGFC GK DE +M G + Y+++I L K +++
Sbjct: 322 DGFCKVGKL----------------DEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRL 365
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL---GLVPDVYTY 279
AL +L +M + P++V YT +++G+ K +E + +L++ G P+V TY
Sbjct: 366 DLALKVLTKMLENSCAPNVVIYTEMVDGLC---KVGKTDEAYRLMLMMEEKGCYPNVVTY 422
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+G K V+ ++++ M G P+ ITY L+ C L+ +L++EMK
Sbjct: 423 TAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
++ Y +I+G + + + + GLL E G ++ I + G +
Sbjct: 483 TYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEM 540
Query: 400 ALELLKQMA 408
ALEL ++++
Sbjct: 541 ALELHEELS 549
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 88/199 (44%), Gaps = 8/199 (4%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M ++G P + + +++ DY A +L ++++ G P YN+ I G+C +
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 292 VEAGIKMIACME-------ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
+ + +++I E E+G + + + LC + + + +++EM KG +
Sbjct: 62 LPS-MEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ TYS +I L + + +A L +E G+ + + C+ GL+ +A
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180
Query: 405 KQMADKDVSPGARVWEALL 423
+M +P + AL+
Sbjct: 181 DEMQQDGCAPNVVTYTALI 199
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 115/218 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ K G +V + ++ +K + + + N M++ G++PD+ Y++++NG+ +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A ELF+E+L GLVP+ T+ I+G CK V +++ M PD+ITYNT
Sbjct: 222 MEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNT 281
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK +L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKEN 341
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ + I GLCQ G A ++L++M + P
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 148/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLIIAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + + G
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ +E
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G P+ +T+ TL+ CK + E+ K+M + + +L TY+ +I GL
Sbjct: 227 ELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E KGL + I G C+ G + A K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + +M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ +I M G
Sbjct: 248 IDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 105/204 (51%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G + + ++++ + + + A+ +FD + GL P V ++N +NG K +++ G
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ M+ G +PDV TY+ L+ LCK ++ EL +EM G+V N T++ +IDG
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDG 250
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G + A + ++ L++ L ++ I GLC++G +++A +L+ +M+ K + P
Sbjct: 251 HCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 416 ARVWEALLLSSVSKLDFVNTSFIR 439
+ L+ S + D R
Sbjct: 311 KITYTTLIDGSCKEGDLETAXXYR 334
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDY 209
GF ++ N M G D T S++++ +C++ + ++EL +EM G V +
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKMEDANELF---EEMLDNGLVPNGVTF 244
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 245 TTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
GL PD TY I+G CK+ ++E M + + D + Y L+ LC+
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ M+++G +G T + ++ C+ + + ++M ++ Y +
Sbjct: 225 ANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXL--AMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G V ++ T
Sbjct: 403 LLKEMQRDGYVPSVVT 418
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 160/333 (48%), Gaps = 23/333 (6%)
Query: 110 ENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFR---INRVGFAIEILNCM-----I 161
N + P F L+ + +++ V+LF ++ +FR N +I ++NC +
Sbjct: 34 RNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEM-EFRGIKYNVCTLSI-LINCFCFLHHV 91
Query: 162 NDGFCVDGKTC-----------SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
+ GF V GKT + ++ VC R ++ G ++EM +G +V
Sbjct: 92 DYGFSVFGKTLKRGFKPDVVIFTTLIDGVC--RIGKTELAAGLLKEMGLVGCVPDVVTCN 149
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+++R + K+ I + M S G+KPD+ Y++ +NG E +A ELFDE+
Sbjct: 150 SLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHR 209
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+VP+ TYN I LC+ + M G PD++ Y+TLL CK L+ +
Sbjct: 210 GVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEM 269
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L +EM+ + + +L Y+I+I+G+ + +A +L + +GL + + G
Sbjct: 270 LVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDG 329
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G + +AL L ++M + PG+ + LL
Sbjct: 330 LCREGSIIEALRLFRKMEEDGCMPGSCSYNVLL 362
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 128/265 (48%), Gaps = 2/265 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI + A +L M G D TC+ ++ C Q + D++ M G
Sbjct: 122 RIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKI--DKVRKIFHLMVSKGLKPD 179
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+ I K EK+ +A+ + ++M G+ P+ V Y ++ + A+ LF
Sbjct: 180 VYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFR 239
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ GL PD+ Y+ ++G CKQ N++ + + M+ KPD++ Y ++ +C+ R
Sbjct: 240 KMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSR 299
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +E++ + +G+ ++ TY+ ++DGL +G IIEA L + G S ++
Sbjct: 300 KVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYN 359
Query: 386 ETICGLCQRGLVRKALELLKQMADK 410
+ G Q ++L+ +MAD+
Sbjct: 360 VLLQGCLQHNDTSTVVQLIHEMADR 384
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 112/211 (53%), Gaps = 2/211 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ ++ A+E+ + M + G + T + ++ ++C+ ++L ++M G
Sbjct: 192 KVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVL--FRKMCACGLSPD 249
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y+ ++ K+ + + L + +M+ +KPD+V YT+++NG+ A+E+
Sbjct: 250 ILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLS 309
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L+V GL PDV+TY ++GLC++ ++ +++ MEE G P +YN LLQ +
Sbjct: 310 RLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHN 369
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ + + +L+ EM +G + T + + D L
Sbjct: 370 DTSTVVQLIHEMADRGFYADAVTRTFLKDFL 400
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
+I + M++ G D + S+ ++ C+ + DE + EM G V Y +I+
Sbjct: 166 KIFHLMVSKGLKPDVYSYSIFINGYCKVEKI--DEAMELFDEMSHRGVVPNAVTYNTLIK 223
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L + + DA + +M + G+ PDI+ Y+ +L+G Q + + LF E+ + P
Sbjct: 224 ALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKP 283
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D+ Y + ING+C+ V+ ++++ + G KPDV TY L+ LC+ + L
Sbjct: 284 DLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLF 343
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++M+ G + +Y++++ G D L+ E ++G
Sbjct: 344 RKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGF 386
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL N+M +P I+ + +L+ V+ + Y LF E+ G+ +V T ++ I
Sbjct: 23 DALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILI 82
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N C ++V+ G + + G KPDV+ + TL+ +C++ + L+KEM G V
Sbjct: 83 NCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCV 142
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ T + ++ G S+G I + + ++KGL + I G C+ + +A+EL
Sbjct: 143 PDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMEL 202
Query: 404 LKQMADKDVSPGARVWEALL 423
+M+ + V P A + L+
Sbjct: 203 FDEMSHRGVVPNAVTYNTLI 222
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
N++ + M + +P +I +N LL ++ ++++ + L KEM+++GI N+ T
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
SI+I+ + + + L +G +F I G+C+ G A LLK+M
Sbjct: 79 SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138
Query: 410 KDVSPGARVWEALLLS--SVSKLDFVNTSFIRLVDQ-----------ILNTPCKME 452
P +L+ S K+D V F +V + +N CK+E
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVE 194
>gi|242046988|ref|XP_002461240.1| hypothetical protein SORBIDRAFT_02g043430 [Sorghum bicolor]
gi|241924617|gb|EER97761.1| hypothetical protein SORBIDRAFT_02g043430 [Sorghum bicolor]
Length = 551
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 197/425 (46%), Gaps = 54/425 (12%)
Query: 31 QTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFS--------IYNCEPPPEA 82
+ L+Q ++ +V+ L ++ + P +++ +L S S + E P
Sbjct: 71 RALEQGRSSDSVELEL------ERLHVDLDPFVVNRVLRSVSDSETAVQFYWWAESRPGF 124
Query: 83 YH------FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
H +++ L +S F +S L+ + + + ++ L+ Y A +F +
Sbjct: 125 DHTQFAIAYIVSLLFIDSNFFLLSEFLERV-RSQGVTLHRSLYRILLSGYVRAGKFDSVI 183
Query: 137 NLFYKI-----PKFRINRVGF-AIEILNC-----------MINDGFCVDGKTCSLILSSV 179
F ++ +F ++ F + + NC ++ GFC+ T S +S++
Sbjct: 184 QTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYGVALDKGFCLTSFTYSRWISAL 243
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV-IRSLVKKEKVFDALGILNQMKSDGIK 238
C+ + E L + +M K G CF + N+ + L K+ ++ DAL +L M+ G
Sbjct: 244 CQSDRIELVERL--LADMDKFG-CFPDIWACNIYVDYLCKQNRLHDALMMLENMEMRGTG 300
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD+V YT ++ + + + +A EL++E++ G+ PD+ + V I GLCK +
Sbjct: 301 PDVVTYTTIVGCLCDNKQFAEAVELWEEMMRRGVKPDIISCGVLIFGLCKNHM------- 353
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
E+G D+++ N L+ A CK +++ +L KEM +KGI + TY +I+GL
Sbjct: 354 -----EVGGFCDIVSCNILIDAFCKAKKVTSALKLFKEMGYKGIQADAVTYGTLINGLYG 408
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G A + E+ L + ++++ + LC+ G +A ++ QM K+VSP
Sbjct: 409 VGYCNLAEEIFEQMLKAQVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDVIT 468
Query: 419 WEALL 423
+ L+
Sbjct: 469 FNTLI 473
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 145/328 (44%), Gaps = 35/328 (10%)
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FI 120
++ LL + C P A + + L + ++ D +L+++E R P+ + +
Sbjct: 250 ELVERLLADMDKFGCFPDIWACNIYVDYLCKQNRLHDALMMLENMEMRGT--GPDVVTYT 307
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
++ D +F ++V L+ + M+ G D +C +++ +C
Sbjct: 308 TIVGCLCDNKQFAEAVELWEE------------------MMRRGVKPDIISCGVLIFGLC 349
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ M+ GFC +V +I + K +KV AL + +M GI+ D
Sbjct: 350 KN-------------HMEVGGFC-DIVSCNILIDAFCKAKKVTSALKLFKEMGYKGIQAD 395
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
V Y ++NG+ AEE+F+++L +VP+V YN+ ++ LCK E K+
Sbjct: 396 AVTYGTLINGLYGVGYCNLAEEIFEQMLKAQVVPNVNLYNIMLHNLCKAGQFEQAQKIFL 455
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M + PDVIT+NTL+ L K +L ++M+ +G+ + T+ +I GL +G
Sbjct: 456 QMIQKEVSPDVITFNTLIYWLGKSSRAIEAVDLFRDMRARGVEPDSLTFRYLISGLLEEG 515
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETI 388
A + E + G+ + D I
Sbjct: 516 KATLAYEVWEYMMENGIILDRDVSDRLI 543
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 3/267 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ GF VD T +LI+++ CE+ + + + F ++ K+G +++Y+++I L K+
Sbjct: 857 MMERGFVVDNATLTLIITAFCEKSLV--NRAVWFFHKVTKMGLSPNLINYSSMISGLCKR 914
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL-GLVPDVYT 278
V A +L +M +G KP++ +T +++G+ + +A LF +L+ P+V+T
Sbjct: 915 GSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHT 974
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y I+G CK+ + + M+E G P+ TY TL+ CK ++ EL++ M
Sbjct: 975 YTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMS 1034
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+G N TY+ ++DGL +G EA LL + + I C+R +
Sbjct: 1035 NEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMN 1094
Query: 399 KALELLKQMADKDVSPGARVWEALLLS 425
+AL L +M P ++ L+ +
Sbjct: 1095 QALVFLNKMFKVGFQPDIHLYTTLIAA 1121
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 147/301 (48%), Gaps = 4/301 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M+ +G+ + T + ++ +C ++ + F++ ++ + + YT +
Sbjct: 920 AFELLEEMVKNGWKPNVYTHTSLIHGLC-KKGWTERAFRLFLKLIRSDNYKPNVHTYTAM 978
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+EK+ A + +MK G+ P+ YT +++G ++ KA EL + + G
Sbjct: 979 ISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGF 1038
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN ++GLCK+ E K++ + + D +TY L+ CK ++N+
Sbjct: 1039 FPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALV 1098
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M G ++ Y+ +I + + ++ L +E + GL + ICG C
Sbjct: 1099 FLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC 1158
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ V A++ ++M+D +P + + AL+ L S+LD + ++D+ L +PC+
Sbjct: 1159 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL-SPCE 1217
Query: 451 M 451
+
Sbjct: 1218 V 1218
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK----AEELFDELLVLGLVPDV 276
K+ +A+ ++ M++ G+ V T V+N +I+ ++ A +FDE+ G+ PD
Sbjct: 776 KLKEAVDMILDMRNQGL----VLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDS 831
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
TY I G C+ NV + I M E G D T ++ A C+ +NR +
Sbjct: 832 CTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHK 891
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
+ G+ NL YS MI GL +G + +A LLEE + G I GLC++G
Sbjct: 892 VTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGW 951
Query: 397 VRKALEL-LKQMADKDVSPGARVWEALL 423
+A L LK + + P + A++
Sbjct: 952 TERAFRLFLKLIRSDNYKPNVHTYTAMI 979
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 111/271 (40%), Gaps = 36/271 (13%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + + +M+ G +I + V A + ++M + G+ PD Y ++
Sbjct: 779 EAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYII 838
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G + ++A+ E++ G V D T + I C+++ V + + ++G
Sbjct: 839 VGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLS 898
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEM---KWKGIVL--------------------- 344
P++I Y++++ LCK + + EL++EM WK V
Sbjct: 899 PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL 958
Query: 345 ------------NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
N+ TY+ MI G + + A L E +GL ++ + I G C
Sbjct: 959 FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 1018
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G KA EL++ M+++ P + +++
Sbjct: 1019 KAGNFSKAYELMELMSNEGFFPNTCTYNSIV 1049
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 108/227 (47%), Gaps = 5/227 (2%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R A ++LN + DG T ++++S C++ D+ ++ L F+ +M K+GF +
Sbjct: 1057 RAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADM--NQALVFLNKMFKVGFQPDIHL 1114
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +I + ++ + D+ + +++ G+ P YT ++ G ++ A + F ++
Sbjct: 1115 YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMS 1174
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD +Y I+GLCK++ ++ ++ M + G P +T TL CK +
Sbjct: 1175 DHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFA 1234
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+++ + K L ++T +I L + + A + L+K
Sbjct: 1235 SAMVILERLNKK---LWIRTVHTLIRKLCCEKKVALAALFFHKLLDK 1278
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M G+ + T S+++ C + L S +L V + K G G Y +
Sbjct: 339 AVELAKKMSKRGYLLGSTTFSIVIP--CAVKVLESSDLCELVDDFIKKGGNLGFDMYIMI 396
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+S ++ + + A +QM SDG+ + Y +V++ + +A E + G
Sbjct: 397 IKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGF 456
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ T+N ING K NV + + E G PDVIT+ +L+ LC +L+
Sbjct: 457 SPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFN 516
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
EM G+ N+QTY+++I GL S G + +A LL + G+ + F+ I C
Sbjct: 517 CFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFC 576
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + KA +L M+ VSP + + AL+
Sbjct: 577 RMRKIEKAQKLFNDMSRYGVSPDSYTYNALI 607
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%)
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C ++ E + ++M K G+ G ++ VI VK + D +++ G
Sbjct: 329 CLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNL 388
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
Y M++ + +D KA + F +++ GL+ V +YN+ I+ K VE ++ I
Sbjct: 389 GFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETI 448
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M+E G P+++T+NTL+ K+ ++ + +K + G++ ++ T++ +IDGL
Sbjct: 449 KVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHT 508
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ +A E G+ ++ I GLC G V KA+ELL +M ++P A +
Sbjct: 509 HQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSF 568
Query: 420 EALLLS 425
A +LS
Sbjct: 569 NAPILS 574
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 130/274 (47%), Gaps = 24/274 (8%)
Query: 92 ENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVG 151
E+S C++ V D I+K N +I I IK++ R +
Sbjct: 370 ESSDLCEL--VDDFIKKGGNLGFDMYIMI--IKSF------------------LRCKDIS 407
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A + + M++DG ++ ++++ C + + L ++ M++ GF +V +
Sbjct: 408 KANKYFSQMVSDGLLSSVESYNIVID--CFAKAGEVERALETIKVMQESGFSPNLVTFNT 465
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I +K V DA L + G+ PD++ +T +++G+ A F E+ G
Sbjct: 466 LINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWG 525
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+V TYNV I+GLC +V I+++ M+ G PD ++N + + C++R++ + +
Sbjct: 526 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQ 585
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+L +M G+ + TY+ +I L + + EA
Sbjct: 586 KLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA 619
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 2/234 (0%)
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+I+ S +D+S + +M G + Y VI K +V AL + M+
Sbjct: 395 MIIKSFLRCKDISKAN--KYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQ 452
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G P++V + ++NG + + A+ ++ GL+PDV T+ I+GLC + ++
Sbjct: 453 ESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLD 512
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ M E G +P+V TYN L+ LC +++ EL+ +MK GI + +++ I
Sbjct: 513 DAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPI 572
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I +A L + G+ S ++ I LC V +A E++ M
Sbjct: 573 LSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 626
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 104/209 (49%), Gaps = 3/209 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E + M GF + T + +++ + ++ + F++ + + G ++ +T++
Sbjct: 444 ALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAK--AFLKMVMEHGLMPDVITFTSL 501
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L ++ DA ++M G++P++ Y ++++G+ KA EL +++ + G+
Sbjct: 502 IDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGI 561
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD Y++N I C+ +E K+ M G PD TYN L++ALC R ++ +E
Sbjct: 562 TPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKE 621
Query: 333 LVKEMKWKGIVLNLQ-TYSIMIDGLASKG 360
++ M+ + Q TY ++ L G
Sbjct: 622 IILAMESISCIGTKQHTYWPVVGALTKMG 650
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ Q+ G++P Y V+ + A F ++ G PD +TYN ++G+C
Sbjct: 167 VFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVC 226
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
++ V+ ++++ ME G +P+V+TY L+ C + +++ MK KG+
Sbjct: 227 RRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEA 286
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY ++ G + A +L E + S + + L + + ++A+EL K+M
Sbjct: 287 TYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKM 346
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ + G+ + ++ +V L+ ++ LVD +
Sbjct: 347 SKRGYLLGSTTFSIVIPCAVKVLE--SSDLCELVDDFI 382
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 4/211 (1%)
Query: 215 SLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+L+++ V + ++ ++S G + +++C + G + Y A E+F ++ LGL
Sbjct: 119 ALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHY--AHEVFVQVPRLGL 176
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P YN I + V+A M G +PD TYNTL+ +C+ ++
Sbjct: 177 RPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALR 236
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LVK+M+ GI N+ TY++++DG + + EA +LE KG+ + + + G
Sbjct: 237 LVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAF 296
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +A +L + + D + + + LL
Sbjct: 297 RCLEKERAYRMLSEWIESDPTLHSIAYHTLL 327
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M DG D T + ++ VC + + DE L V++M++ G +V YT ++
Sbjct: 206 MPADGCRPDCFTYNTLVHGVCRRGIV--DEALRLVKQMERAGIRPNVVTYTMLVDGFCNA 263
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A+ +L +MK G+ Y +++G + +A + E + Y
Sbjct: 264 SRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAY 323
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ + L K + + +++ M + G T++ ++ KV E + L ELV +
Sbjct: 324 HTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIK 383
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG L Y ++I DI +A + ++ GL + ++ I + G V +
Sbjct: 384 KGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVER 443
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
ALE +K M + SP + L+
Sbjct: 444 ALETIKVMQESGFSPNLVTFNTLI 467
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M G+ + T S+++ C + L S +L V + K G G Y +
Sbjct: 339 AVELAKKMSKRGYLLGSTTFSIVIP--CAVKVLESSDLCELVDDFIKKGGNLGFDMYIMI 396
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+S ++ + + A +QM SDG+ + Y +V++ + +A E + G
Sbjct: 397 IKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGF 456
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ T+N ING K NV + + E G PDVIT+ +L+ LC +L+
Sbjct: 457 SPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFN 516
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
EM G+ N+QTY+++I GL S G + +A LL + G+ + F+ I C
Sbjct: 517 CFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFC 576
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + KA +L M+ VSP + + AL+
Sbjct: 577 RMRKIEKAQKLFNDMSRYGVSPDSYTYNALI 607
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%)
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C ++ E + ++M K G+ G ++ VI VK + D +++ G
Sbjct: 329 CLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNL 388
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
Y M++ + +D KA + F +++ GL+ V +YN+ I+ K VE ++ I
Sbjct: 389 GFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETI 448
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M+E G P+++T+NTL+ K+ ++ + +K + G++ ++ T++ +IDGL
Sbjct: 449 KVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHT 508
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ +A E G+ ++ I GLC G V KA+ELL +M ++P A +
Sbjct: 509 HQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSF 568
Query: 420 EALLLS 425
A +LS
Sbjct: 569 NAPILS 574
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 130/274 (47%), Gaps = 24/274 (8%)
Query: 92 ENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVG 151
E+S C++ V D I+K N +I I IK++ R +
Sbjct: 370 ESSDLCEL--VDDFIKKGGNLGFDMYIMI--IKSF------------------LRCKDIS 407
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A + + M++DG ++ ++++ C + + L ++ M++ GF +V +
Sbjct: 408 KANKYFSQMVSDGLLSSVESYNIVID--CFAKAGEVERALETIKVMQESGFSPNLVTFNT 465
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I +K V DA L + G+ PD++ +T +++G+ A F E+ G
Sbjct: 466 LINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWG 525
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+V TYNV I+GLC +V I+++ M+ G PD ++N + + C++R++ + +
Sbjct: 526 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQ 585
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+L +M G+ + TY+ +I L + + EA
Sbjct: 586 KLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA 619
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 2/234 (0%)
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+I+ S +D+S + +M G + Y VI K +V AL + M+
Sbjct: 395 MIIKSFLRCKDISKAN--KYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQ 452
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G P++V + ++NG + + A+ ++ GL+PDV T+ I+GLC + ++
Sbjct: 453 ESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLD 512
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ M E G +P+V TYN L+ LC +++ EL+ +MK GI + +++ I
Sbjct: 513 DAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPI 572
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I +A L + G+ S ++ I LC V +A E++ M
Sbjct: 573 LSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 626
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 4/224 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E + M GF + T + +++ + ++ + F++ + + G ++ +T++
Sbjct: 444 ALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAK--AFLKMVMEHGLMPDVITFTSL 501
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L ++ DA ++M G++P++ Y ++++G+ KA EL +++ + G+
Sbjct: 502 IDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGI 561
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD Y++N I C+ +E K+ M G PD TYN L++ALC R ++ +E
Sbjct: 562 TPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKE 621
Query: 333 LVKEMKWKGIVLNLQ-TYSIMIDGLASKGDIIEACGLLEEALNK 375
++ M+ + Q TY ++ L G EA G+ L++
Sbjct: 622 IILAMESISCIGTKQHTYWPVVGALTKMGRFSEA-GMFMNKLHR 664
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ Q+ G++P Y V+ + A F ++ G PD +TYN ++G+C
Sbjct: 167 VFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVC 226
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
++ V+ ++++ ME G +P+V+TY L+ C + +++ MK KG+
Sbjct: 227 RRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEA 286
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY ++ G + A +L E + S + + L + + ++A+EL K+M
Sbjct: 287 TYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKM 346
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ + G+ + ++ +V L+ ++ LVD +
Sbjct: 347 SKRGYLLGSTTFSIVIPCAVKVLE--SSDLCELVDDFI 382
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 4/211 (1%)
Query: 215 SLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+L+++ V + ++ ++S G + +++C + G + Y A E+F ++ LGL
Sbjct: 119 ALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHY--AHEVFVQVPRLGL 176
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P YN I + V+A M G +PD TYNTL+ +C+ ++
Sbjct: 177 RPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALR 236
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LVK+M+ GI N+ TY++++DG + + EA +LE KG+ + + + G
Sbjct: 237 LVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAF 296
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +A +L + + D + + + LL
Sbjct: 297 RCLEKERAYRMLSEWIESDPTLHSIAYHTLL 327
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M DG D T + ++ VC + + DE L V++M++ G +V YT ++
Sbjct: 206 MPADGCRPDCFTYNTLVHGVCRRGIV--DEALRLVKQMERAGIRPNVVTYTMLVDGFCNA 263
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A+ +L +MK G+ Y +++G + +A + E + Y
Sbjct: 264 SRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAY 323
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ + L K + + +++ M + G T++ ++ KV E + L ELV +
Sbjct: 324 HTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIK 383
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG L Y ++I DI +A + ++ GL + ++ I + G V +
Sbjct: 384 KGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVER 443
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
ALE +K M + SP + L+
Sbjct: 444 ALETIKVMQESGFSPNLVTFNTLI 467
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 133/253 (52%), Gaps = 2/253 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI G D TCS IL +C L+ +L ++EM +G V YT +I +L+K
Sbjct: 262 MIMSGVMPDVVTCSSILYGLCRHGKLTEAAML--LREMYNMGLDPNHVSYTTIISALLKS 319
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A +QM GI D+V T +++G+ +AEE+F +L L LVP+ TY
Sbjct: 320 GRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTY 379
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
++G CK +VE ++ ME+ P+V+T+++++ K LN+ E++++M
Sbjct: 380 TALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQ 439
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
I+ N+ Y+I++DG G A G +E + GL + +FD + L + G +++
Sbjct: 440 MNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKE 499
Query: 400 ALELLKQMADKDV 412
A L+K + K +
Sbjct: 500 AQSLIKDILSKGI 512
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 1/233 (0%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L VQEM + F +V Y + + L++ K ++ + ++M G+ PD V Y V+N
Sbjct: 536 LSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEPKSVFSRMIELGLTPDCVTYNSVMNT 594
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+Q A +L +E+ G++P++ TYN+ I GLCK +E I ++ M +G P
Sbjct: 595 YFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPT 654
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
I + LL+A + R+ + + ++ K++ G+ LN Y+ +I L G +A +L
Sbjct: 655 PIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLT 714
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E + KG+ ++ I G C V KA QM +SP + ALL
Sbjct: 715 EMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALL 767
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%)
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
R +D +L +++ +G + Y +I L + A +L +M GI DI
Sbjct: 666 SRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADI 725
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V Y ++ G KA + ++LV G+ P++ TYN + GL + K+++
Sbjct: 726 VTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSE 785
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M E G P+ TYN L+ +V +L EM KG + TY+++I A G
Sbjct: 786 MRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGK 845
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ +A LL E L +G SS +D ICG C+
Sbjct: 846 MRQARELLNEMLTRGRIPNSSTYDVLICGWCK 877
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 39/301 (12%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL-------GFC 203
GF + L+ M+ G C D TC++++ C+ +G VQ + + G
Sbjct: 94 GFGL--LSEMVKKGVCFDSVTCNILVKGYCQ---------IGLVQYAEWIMGNLVGGGVP 142
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ ++ + V AL ++ +G+KPDIV Y ++N + D KAE +
Sbjct: 143 LDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESV 202
Query: 264 FDELL---------------------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+E+L + L P V T+ I CK ++ + M
Sbjct: 203 VNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQM 262
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G PDV+T +++L LC+ +L L++EM G+ N +Y+ +I L G +
Sbjct: 263 IMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRV 322
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+EA + + +G+ + + GL + G ++A E+ + + ++ P + AL
Sbjct: 323 MEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTAL 382
Query: 423 L 423
L
Sbjct: 383 L 383
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 133/296 (44%), Gaps = 19/296 (6%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-----DELLGFVQ--EMKK 199
+ V A++++ +G D T + ++++ C++ DL+ +E+LGF + E
Sbjct: 158 VGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGV 217
Query: 200 LGFCF------------GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
L C +V +T +I + K + D + QM G+ PD+V + +
Sbjct: 218 LNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSI 277
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L G+ +A L E+ +GL P+ +Y I+ L K V + M G
Sbjct: 278 LYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGI 337
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
D++ T++ L K + E+ + + +V N TY+ ++DG GD+ A
Sbjct: 338 SIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAET 397
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L++ + + F I G ++G++ KA+E+L++M ++ P V+ LL
Sbjct: 398 VLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILL 453
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 25/250 (10%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+D+ G + EM K G CF V +++ + V A I+ + G+ D +
Sbjct: 91 ADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNT 150
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV-------------- 292
+++G +A +L ++ G+ PD+ TYN +N CK+ ++
Sbjct: 151 LVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFR 210
Query: 293 ---------EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ G++ + +L +P V+T+ TL+ A CK R ++ L ++M G++
Sbjct: 211 RDDESGVLNDCGVETWDGLRDL--QPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVM 268
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ T S ++ GL G + EA LL E N GL + I L + G V +A
Sbjct: 269 PDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNH 328
Query: 404 LKQMADKDVS 413
QM + +S
Sbjct: 329 QSQMVVRGIS 338
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 113/239 (47%), Gaps = 7/239 (2%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G +D C+ ++ + + S E Q + KL V YT ++ K
Sbjct: 332 MVVRGISIDLVLCTTMMDGLFKAG--KSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKV 389
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
V A +L +M+ + + P++V ++ ++NG + KA E+ +++ + ++P+V+ Y
Sbjct: 390 GDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVY 449
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ++G + EA M+ G + + I ++ LL L + + + L+K++
Sbjct: 450 AILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILS 509
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KGI L++ YS ++DG +G+ A +++E K + FD +GL+R
Sbjct: 510 KGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDM-----QFDVVAYNALTKGLLR 563
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
L+ E+++ G+VP+V++ N+ ++ LCK ++ + + S D +TYNT++ C
Sbjct: 32 LYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLR-----NSVFDHVTYNTVVWGFC 86
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K ++ L+ EM KG+ + T +I++ G G + A ++ + G+ +
Sbjct: 87 KRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAI 146
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
+ + G C+ GLV +AL+L++ V P + L+ + + D + V+
Sbjct: 147 GLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESV--VN 204
Query: 443 QILN 446
+IL
Sbjct: 205 EILG 208
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 3/253 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + +L C+ D+ E + +Q+M+K +V ++++I KK + A+ +L
Sbjct: 378 TYTALLDGHCKVGDVEFAETV--LQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLR 435
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M I P++ Y ++L+G + A + E+ GL + +++ +N L +
Sbjct: 436 KMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSG 495
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ +I + G DV Y++L+ K + +V+EM K + ++ Y+
Sbjct: 496 GMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYN 555
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+ GL G E + + GL ++ + +G AL+LL +M
Sbjct: 556 ALTKGLLRLGK-YEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSY 614
Query: 411 DVSPGARVWEALL 423
V P + L+
Sbjct: 615 GVMPNMVTYNILI 627
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 192 GFVQEMKKL-------GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
GFV ++K L G + ++ SL K + ALG L D + + V +
Sbjct: 24 GFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYLRNSVFDHVTYNTVVW 83
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
G+ Q L E++ G+ D T N+ + G C+ V+ ++ +
Sbjct: 84 GFCKRGLADQ-----GFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVG 138
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDII 363
G D I NTL+ C+V ++R +LV++ WK G+ ++ TY+ +++ +GD+
Sbjct: 139 GGVPLDAIGLNTLVDGYCEVGLVSRALDLVED-GWKNGVKPDIVTYNTLVNAFCKRGDLA 197
Query: 364 EACGLLEEALN 374
+A ++ E L
Sbjct: 198 KAESVVNEILG 208
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M L P + +N LL +++++ L EM G+V N+ + ++++ L GD
Sbjct: 1 MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ A G L ++ ++ + G C+RGL + LL +M K V
Sbjct: 61 LGLALGYLRNSV-----FDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGV 106
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 141/279 (50%), Gaps = 4/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ NR+ A M G + T +++++ C+ + LL ++EMK+ G
Sbjct: 19 KANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL--LKEMKESGLAPN 76
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+ VI ++ KV A + QM +G P++V Y +L+G+ +A EL D
Sbjct: 77 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 136
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL PD ++Y+ + GLCK ++ +K+ PDV+ Y+TL+ LCK
Sbjct: 137 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-F 384
L+ +L ++M+ ++ T++ ++DGL KGD ++ + E + CT + + +
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLC-KGDRLQEAQQVLETMEDRNCTPNVITY 255
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G VR A E+ K+M + + P + +L+
Sbjct: 256 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 294
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +++ +C+ L DE ++M++ +V +T ++ L K +++ +A +L M
Sbjct: 186 STLIAGLCKTGRL--DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ P+++ Y+ +++G+ A+E+F ++V G+ P+V TYN I+G C N V
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
++ + ++ M G PD+ITYNTL+ LCK L +MK K ++ TYS +
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G I A L ++ L + + F + G C GLV A LL++M D
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423
Query: 413 SPGARVWEALL 423
SP + +L+
Sbjct: 424 SPDVYTYTSLV 434
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 113/218 (51%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y+++I L K +V DA + +M GI+P++V Y +++G + A L +
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G +PD+ TYN I+GLCK ++ M+ PDVITY+ L+ CK+
Sbjct: 312 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 371
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ R L +M + ++ ++ T+S +++G + G + +A LLEE + +
Sbjct: 372 RIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYT 431
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C+ G + +A +LK+MA + P + AL+
Sbjct: 432 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 469
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 143/302 (47%), Gaps = 4/302 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +V A ++ M+ +G + T + +LS +C R+ DE + EM++ G
Sbjct: 89 RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC--RNGLMDEAYELLDEMRERGLQPD 146
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y ++ L K K+ AL + + PD+V Y+ ++ G+ +A +LF+
Sbjct: 147 KFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFE 206
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ PDV T+ ++GLCK + ++ +++ ME+ P+VITY++L+ LCK
Sbjct: 207 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 266
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +E+ K M +GI N+ TY+ +I G + A L+EE G ++
Sbjct: 267 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 326
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
I GLC+ G +A L M K +P + L+ + ++D T F ++ Q
Sbjct: 327 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 386
Query: 444 IL 445
+
Sbjct: 387 AV 388
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 148/334 (44%), Gaps = 23/334 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
+CEP + ++ L + + + VL+ +E R TP I + LI + +
Sbjct: 212 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC--TPNVITYSSLIDGLCKTGQVR 269
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
D+ +F ++ + + + N +I+ GFC+ S +L
Sbjct: 270 DAQEVFKRMI---VRGIEPNVVTYNSLIH-GFCMTNGVDSALL----------------L 309
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++EM G ++ Y +I L K + +A + MK+ PD++ Y+ ++ G
Sbjct: 310 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 369
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
E A LFD++L ++PDV T++ + G C V+ +++ M PDV T
Sbjct: 370 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYT 429
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y +L+ CKV + R ++K M +G N+ TY+ +ID G A LLEE +
Sbjct: 430 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMV 489
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G+ + I G C G + +A ++L+++
Sbjct: 490 GNGVQPNVITYRSLIGGFCGTGDLEEARKMLERL 523
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ +T +I L K ++ +A +MK G P+ Y +++NG +A L
Sbjct: 7 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 66
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL P+V TY+ I+G C+Q V+ K+ M E G P+++TYNTLL LC+
Sbjct: 67 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 126
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ EL+ EM+ +G+ + +Y ++ GL G I A + E+ N +
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G + +A +L ++M + P + AL+
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALM 224
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 105/194 (54%), Gaps = 2/194 (1%)
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
+++ +T++++G+ +A F ++ G VP+ +TYNV ING CK + V ++
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M+E G P+V+TY+T++ C+ +++ +L ++M G + NL TY+ ++ GL
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
G + EA LL+E +GL +D + GLC+ G + AL++ + ++ D P +
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185
Query: 420 EALL--LSSVSKLD 431
L+ L +LD
Sbjct: 186 STLIAGLCKTGRLD 199
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 146/358 (40%), Gaps = 39/358 (10%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
+C P AY +I L + + + + + + REN P+ + F L+ R Q
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM--RENSCEPDVVTFTALMDGLCKGDRLQ 234
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMIN--------DGFCVDGKTCSLILSSVCEQRDL 185
++ +V +E NC N DG C G+ RD
Sbjct: 235 EA------------QQVLETMEDRNCTPNVITYSSLIDGLCKTGQV-----------RDA 271
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ M G +V Y ++I V AL ++ +M + G PDI+ Y
Sbjct: 272 QE-----VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 326
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++G+ +A LF ++ PDV TY+ I G CK ++ + M +
Sbjct: 327 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 386
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
PDV+T++TL++ C ++ L++EM ++ TY+ ++DG G ++EA
Sbjct: 387 AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 446
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L+ +G + I C+ G A +LL++M V P + +L+
Sbjct: 447 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLI 504
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 151/319 (47%), Gaps = 27/319 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV--------------GFAIE 155
++F LI Y ++ +D++ F + +P +V GF E
Sbjct: 67 YVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKE 126
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
IL C G+ ++++ C++ ++ + + K G +V + ++
Sbjct: 127 ILEC----GYPASLYFFNILMHRFCKEGEMRLAQ--SVFDAITKWGLRPSVVSFNTLMSG 180
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
++ + + + + M + G++PD+ Y++++NG+ + +A ELF+E+L GLVP+
Sbjct: 181 YIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPN 240
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+ I+G CK V+ +++ + G PD+ITYNTL+ LCK +L + R+L+
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLID 300
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM K + + TY+ +IDG +GD+ A + + + + + I GLCQ G
Sbjct: 301 EMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG 360
Query: 396 LVRKALELLKQMADKDVSP 414
A ++L+ M + P
Sbjct: 361 RSVDAEKMLRGMLSVGLKP 379
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 105/199 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ +A + N+M +G+ P+ V +T +++G A E++ +LL
Sbjct: 209 YSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLL 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD+ TYN I GLCK+ +++ +I M KPD ITY TL+ CK +L
Sbjct: 269 SQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L L+ GL + + I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQM 407
C++G V+ +LLK+M
Sbjct: 389 NEFCKKGDVKTGSKLLKEM 407
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 99/178 (55%), Gaps = 1/178 (0%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ +FD + GL P V ++N ++G + +++ G ++ + M G +PDV TY+ L+
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK +++ EL EM G+V N T++ +IDG G + A + ++ L++G
Sbjct: 215 GLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSP 274
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I GLC++G +++A +L+ +M+ K++ P + L+ S + D + T+F
Sbjct: 275 DLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGD-LETAF 331
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M G D T S++++ +C++ + DE EM G
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM--DEANELFNEMLDNGLVPN 240
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I Q+ S G PD++ Y ++ G+ + D +A +L D
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLID 300
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + L PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 301 EMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG 360
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++ M G+ + TY+++I+ KGD+ LL+E G
Sbjct: 361 RSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDG 411
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 2/191 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ N M+++G +G T + ++ C+ + D + +++ GF ++ Y +
Sbjct: 225 ANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQLLSQGFSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M +KPD + YT +++G + D A E ++ +
Sbjct: 283 IFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KPD TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSK 402
Query: 333 LVKEMKWKGIV 343
L+KEM G V
Sbjct: 403 LLKEMXRDGHV 413
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI +++ GF D T + ++ +C++ DL L + EM +
Sbjct: 255 GRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDL--IDEMSMKELKPDKI 312
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + I+ D V YT +++G+ + V AE++ +
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGM 372
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L +GL PD TY + IN CK+ +V+ G K++ M G P V+T
Sbjct: 373 LSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 117/217 (53%), Gaps = 5/217 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V + ++ +L KK K+ +A GI+ M G++P+ V Y+ ++NG ++Q +A ++F+
Sbjct: 11 VTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNA 70
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G +PDV +YN+ ING CK ++ ++ M G P+ TYNTLL K +
Sbjct: 71 MITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQK- 129
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+L K+M +G +L TYSI + GL+ +G + +A L E N L +++
Sbjct: 130 ----IQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNI 185
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I +C+ G + A EL ++ K + P R W +++
Sbjct: 186 LIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSII 222
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 8/247 (3%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T ++++ ++C++ +S E G V+ M + G V Y++++ + + +VF+A
Sbjct: 9 DAVTFNILVDTLCKKGKIS--EAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARK 66
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ N M + G PD++ Y +++NG + +A+++FDE+ GL+P+ TYN + G
Sbjct: 67 VFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFW 126
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
KQ I++ M G PD++TY+ L L K L++ EL +EM+ + +L
Sbjct: 127 KQK-----IQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLV 181
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y+I+ID + G + +A L + KGL + I GLC+ GL+ +A + +QM
Sbjct: 182 IYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQM 241
Query: 408 ADKDVSP 414
++D P
Sbjct: 242 -ERDGCP 247
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 29/253 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL--------------------SS 187
NRV A ++ N MI G D + +++++ C+ + + +
Sbjct: 59 NRVFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATY 118
Query: 188 DELLG--------FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
+ LLG ++M G +V Y+ + L K+ + AL + +M+++ + P
Sbjct: 119 NTLLGGFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNP 178
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D+V Y ++++ + A ELF +L V GL+PDV ++ I+GLC++ ++ K
Sbjct: 179 DLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAF 238
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
ME G PD +YN +++ + +R +L +EM +G + T ++ D L SK
Sbjct: 239 RQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAAD-LLSK 297
Query: 360 GDIIEACGLLEEA 372
D + LL E+
Sbjct: 298 DDNLGLKRLLGES 310
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A I MI G D +L++ + C+ ++ D + + MKK + +
Sbjct: 482 AFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNM--DRAIRIFERMKKERMQPSNRTFRPI 539
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + AL L+ M+ G P ++ Y +++G+I + +A + D++ + G+
Sbjct: 540 IEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGI 599
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +TY + + G ++ + ++E G K DV Y TLL+A CK +
Sbjct: 600 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 659
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +EM ++ I N Y+I+IDG A +GD+ EA L+++ G+ F I C
Sbjct: 660 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACC 719
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G +++A ++++MAD + P + + L+
Sbjct: 720 KAGDMQRAENVIQEMADVGLKPNVKTFTTLI 750
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 35/249 (14%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ +K+ GF ++ Y +I VK KV AL + +M+S GIK + Y+M++NG I
Sbjct: 417 ERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHL 476
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM---------------- 298
D+ A +F++++ GL PD YN+ + CK N++ I++
Sbjct: 477 HDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTF 536
Query: 299 -------------------IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ M G P V+TYN L+ L + ++ R ++ +M
Sbjct: 537 RPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSI 596
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
GI N TY+I++ G A+ GDI +A + GL +++ + C+ G ++
Sbjct: 597 AGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQS 656
Query: 400 ALELLKQMA 408
AL + ++M+
Sbjct: 657 ALAVTREMS 665
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M++ G ++ Y +I L++K +V A+ +L++M GI P+ YT+++ G D
Sbjct: 559 MRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGD 618
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA E F ++ GL DVY Y + CK +++ + + M + YN
Sbjct: 619 IGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNI 678
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ + ++ +L+K+MK GI N+ T++ I+ GD+ A +++E + G
Sbjct: 679 LIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVG 738
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
L F I G + L +AL+ ++M + P + L+ S +S+ + S
Sbjct: 739 LKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGS 798
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 109/220 (49%), Gaps = 2/220 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++V A+ +L+ M G + T ++I+ D+ + + ++K+ G
Sbjct: 580 RKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIG--KAFEYFTKIKESGLKLD 637
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++R+ K ++ AL + +M I + Y ++++G + D +A +L
Sbjct: 638 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMK 697
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+++T+ YIN CK +++ +I M ++G KP+V T+ TL++ KV
Sbjct: 698 QMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVS 757
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+R + +EMK G+ + Y ++ L S+ ++E
Sbjct: 758 LPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEG 797
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/441 (18%), Positives = 177/441 (40%), Gaps = 57/441 (12%)
Query: 26 KAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHF 85
+A+W + ++A+ + + ++ + +P +++ +F +P +
Sbjct: 200 RARWVEAGVAREARSPWHKGREDACREFRRVLESRPEDWQAVVSAFERIP-KPSRREFGL 258
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF 145
++ A+ + +++ R E F+F L+ YA A +
Sbjct: 259 MVVYYAKRGDKHHARATFENMRAR-GIEPNAFVFTSLVHAYAVARDMRG----------- 306
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
A+ + M ++G + T S++++ + D S + L F + KL G
Sbjct: 307 -------ALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKL-FKEAKTKLDNLNG 358
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y+N+I + + + A ++ +M+ DGI I Y +++G V +D K +F+
Sbjct: 359 II-YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFE 417
Query: 266 ELLVLGLVPDVY-----------------------------------TYNVYINGLCKQN 290
L G P + TY++ ING +
Sbjct: 418 RLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLH 477
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + M + G +PD YN L++A CK+ ++R + + MK + + + +T+
Sbjct: 478 DFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFR 537
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I+G A GD+ A L+ G ++ I GL ++ V +A+ +L +M+
Sbjct: 538 PIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIA 597
Query: 411 DVSPGARVWEALLLSSVSKLD 431
++P + ++ + D
Sbjct: 598 GIAPNEHTYTIIMRGYAASGD 618
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%)
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K+ A M++ GI+P+ +T +++ V D A +E+ GL V
Sbjct: 264 AKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTV 323
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
TY++ I G K N+ E+ K+ + + I Y+ ++ A C+ ++R ELV+E
Sbjct: 324 VTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVRE 383
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M+ GI + Y M+ G D + + E G + I + G
Sbjct: 384 MEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGK 443
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
V KAL + K+M + + + L+ + DF N
Sbjct: 444 VPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANA 482
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 23/366 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SL+ S + P Y+ VI L +N + V +EK+ + LI
Sbjct: 695 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK-GIRADAVTYNTLISG 753
Query: 126 YADAHRFQDSVNLFYKIPKFRIN-RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+++ R+ D+ L + K +I+ V F +++ + +G ++ E R+
Sbjct: 754 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG-------------NLLEARN 800
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L +EM + + Y ++I + DA + + M S G PD+V Y
Sbjct: 801 L--------YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 852
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ G + +LF E+ GLV D +TYN I+G C+ + K+ M +
Sbjct: 853 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 912
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD++TYN LL LC ++ + +V++++ + +++ TY+I+I GL + E
Sbjct: 913 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 972
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A L KG+ + + I GLC++GL R+A +L ++M + P R+++ L
Sbjct: 973 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032
Query: 425 SSVSKL 430
+ L
Sbjct: 1033 DHYTSL 1038
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 142/319 (44%), Gaps = 47/319 (14%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+NR+G A ++ M+ G+ + + ++ +C+ +L + L + EM+K G +
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGEL--NIALELLNEMEKKGLGADV 211
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++ L + DA +L M I PD+V +T +++ + Q + +A+EL+ E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ + P+ TYN INGLC + K M G P+V+TYNTL+ CK R
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG-------------------DIIEACG 367
++ +L + M +G ++ TY+ +I G G DII C
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 368 LLEEALNKGLCTQSSM------FDE---------------TICGLCQRGLVRKALELLKQ 406
LL GLC + FD+ I GLC+ V KA EL +
Sbjct: 392 LLH-----GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446
Query: 407 MADKDVSPGARVWEALLLS 425
+ + V P AR + ++L
Sbjct: 447 LPVEGVKPDARTYTIMILG 465
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 112/236 (47%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ +M+ LG + +T +I + ++ AL +L +M G +P IV +
Sbjct: 621 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 680
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG + +A L D + G VP+V YN INGLCK ++ +++ CME+ G
Sbjct: 681 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 740
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ D +TYNTL+ L L+++M + I N+ ++ +ID +G+++EA
Sbjct: 741 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 800
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E + + + ++ I G C G + A + M K P + L+
Sbjct: 801 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 856
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 115/236 (48%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+ ++ F Q+M+ G + +T +I + ++ AL +L +M G +P IV + +
Sbjct: 88 ETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSL 147
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G + A L ++ G P+V YN I+GLCK + ++++ ME+ G
Sbjct: 148 LHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
DV+TYNTLL LC + ++++M + I ++ T++ +ID +G++ EA
Sbjct: 208 GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE 267
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E + + + ++ I GLC G + A + MA K P + L+
Sbjct: 268 LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 107/218 (49%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L + +M KLG+ +V + +++ ++ DA ++ M G +P++V Y +++G
Sbjct: 126 LSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + A EL +E+ GL DV TYN + GLC +M+ M + PD
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V+T+ L+ K L+ +EL KEM + N TY+ +I+GL G + +A +
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
+KG ++ I G C+ +V + ++L ++M+
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 134/299 (44%), Gaps = 4/299 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + + M N G D + ++++ C R L + +M KLGF
Sbjct: 616 KMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFC--RCSRLSLALALLGKMMKLGFRPS 673
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +++ + + +A+ +++ M G P++V Y V+NG+ D A E+F
Sbjct: 674 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 733
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G+ D TYN I+GL +++ M + P+VI + L+ K
Sbjct: 734 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 793
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L R L KEM + +V N+ TY+ +I+G G + +A + + ++KG ++
Sbjct: 794 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 853
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
I G C+ V ++L +M + + A + L+ KL+ F R+VD
Sbjct: 854 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 912
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 133/322 (41%), Gaps = 19/322 (5%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL-NC----------------MI 161
F ++ A ++F + L++K+ I+ ++ IL +C M+
Sbjct: 607 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 666
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
GF T +L+ C+ E + V M GF +V Y VI L K
Sbjct: 667 KLGFRPSIVTLGSLLNGFCQGNRFQ--EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ +AL + M+ GI+ D V Y +++G+ + A L +++ + P+V +
Sbjct: 725 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+ K+ N+ + M P+V TYN+L+ C L + + M KG
Sbjct: 785 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
++ TY+ +I G + + L E +GL + ++ I G CQ G + A
Sbjct: 845 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904
Query: 402 ELLKQMADKDVSPGARVWEALL 423
++ +M D VSP + LL
Sbjct: 905 KVFNRMVDCGVSPDIVTYNILL 926
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 156/378 (41%), Gaps = 39/378 (10%)
Query: 53 QQQQIPKQPHILS--SLLHSFSIYN----------------CEPPPEAYHFVIKTLAENS 94
+ ++ +P I++ SLLH F + N EP Y+ +I L +N
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 95 QFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAI 154
+ +L+ +EK+ + L+ + R+ D+ + + K IN
Sbjct: 191 ELNIALELLNEMEKK-GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP----- 244
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
D T + ++ +Q +L DE +EM + V Y ++I
Sbjct: 245 -------------DVVTFTALIDVFVKQGNL--DEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L +++DA + M S G P++V Y +++G + +LF + G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D++TYN I+G C+ + + + M PD+IT+ LL LC E+
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M+ + + Y+IMI GL + +A L +G+ + + I GLC+
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 395 GLVRKALELLKQMADKDV 412
G R+A EL+++M ++ +
Sbjct: 470 GPRREADELIRRMKEEGI 487
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 208 DYTNVIRS-LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
DY +R+ + + DA + +M P IV +T +L Y +
Sbjct: 37 DYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQK 96
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + G+ D+Y++ + I+ C+ + + + ++ M +LG +P ++T+ +LL C V
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ LV M G N+ Y+ +IDGL G++ A LL E KGL ++
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC G A +L+ M + ++P + AL+
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +R+ + K DA + +M P IV +T VL + + L+ ++
Sbjct: 572 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 631
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
LG+ D+Y++ + I+ C+ + + + ++ M +LG +P ++T +LL C+
Sbjct: 632 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 691
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
LV M G V N+ Y+ +I+GL D+ A + KG+ + ++ I
Sbjct: 692 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 751
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL G A LL+ M + + P + AL+
Sbjct: 752 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 786
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 188/446 (42%), Gaps = 39/446 (8%)
Query: 34 DQQQAKQNVKQSL----TTPPTKQQQQIPKQPHILSSLLHSFSIY-----NCEPPPEAYH 84
DQ+ +++ SL + T +Q+ K+ L H F ++ E E+YH
Sbjct: 57 DQRNPHHDLETSLNAFSSEISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSEESYH 116
Query: 85 FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK 144
++ L + QF + L + + +FE + I + ++Y+ A+ D++ F ++ +
Sbjct: 117 ILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAE 176
Query: 145 F-----------------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
F + V A + + + F KT S+++ + + +
Sbjct: 177 FGLRPSVDDLDKLLYVLCKCKHVKCAQQFFD-RVKHKFEAKAKTYSILVRGWGDIGE--A 233
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
E EM+ G ++ Y +++ +L K V +A + ++ S G++PD Y +
Sbjct: 234 VEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIF 293
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ + + D + LVP+V+TYN I LCK VE +++ M E G
Sbjct: 294 IRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGV 353
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD +YNT+L C+ E+NR +L+ M + + +Y++++ L G A
Sbjct: 354 SPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATE 413
Query: 368 LLEEALNKGLCTQSSMFDETICGLC-QRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
+ E +G S + I GLC ++G + +A + M D+ + P A E L
Sbjct: 414 IWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRL 473
Query: 427 VSKLDFVNTSFIRLVDQILNTPCKME 452
+ L+D I CKME
Sbjct: 474 IG---------FGLLDHIEILACKME 490
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 106/283 (37%), Gaps = 58/283 (20%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
+ EP +Y I+ E + + SVLD + KR + F + +IK + +
Sbjct: 281 HGVEPDACSYAIFIRAYCEANNIHSVFSVLDRM-KRYDLVPNVFTYNCIIKKLCKNGKVE 339
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
D A ++L+ M+ G D + + IL+ CE +++
Sbjct: 340 D------------------AYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNR------ 375
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
A +++ M D PD Y M+L ++
Sbjct: 376 -------------------------------ATKLISIMVKDNCLPDRHSYNMLLKLLVR 404
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC-KQNNVEAGIKMIACMEELGSKPDVI 312
+ +A E+++ + G P V TY+V I+GLC K+ +E + M + G P
Sbjct: 405 VGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYAS 464
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
T L L L+ + L +M+ +G ++Q + + G
Sbjct: 465 TIEMLRNRLIGFGLLDHIEILACKME-RGTSCSIQELAKEMRG 506
>gi|297834130|ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
gi|297330787|gb|EFH61206.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
Length = 528
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 161/328 (49%), Gaps = 28/328 (8%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y I+ L E +F I VL + +K ++ ++ +F+ I ++ Y + + + LF ++
Sbjct: 93 YSAFIRRLREAKKFSTIHEVLQYQKKFDDIKSEDFV-IRIMLLYGYSGMAEHAHKLFDEM 151
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM-KKLG 201
P+ LNC K+ + +LS+ R L DE +E+ +KLG
Sbjct: 152 PE------------LNCERT------VKSFNALLSAYVNSRKL--DEAKKAFKELPEKLG 191
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V Y +I++L + + D L I +++ +G +PD++ + +L +E +V+ +
Sbjct: 192 ITPDLVTYNTMIKALCRTGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 251
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
++D + L P++ +YN + GL + I +I M+ G PDV TYN + A
Sbjct: 252 RIWDLMKSKNLAPNIRSYNSRVRGLTRNKKFTDAIDLINVMKTEGISPDVHTYNAFITA- 310
Query: 322 CKVRELNRLRELVK---EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
R N L E++K EMK KG+ + TY ++I L KGD+ A + EEA+ L
Sbjct: 311 --YRGDNNLEEVMKWYNEMKEKGLTPDTVTYCLLIPLLCKKGDLDRAVEISEEAIKHKLL 368
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQ 406
++ +M+ + L G + +A +L+K
Sbjct: 369 SRPNMYKPVVERLMGAGKIDEATQLVKN 396
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 105/220 (47%), Gaps = 5/220 (2%)
Query: 209 YTNVIRSLVKKEKVFDALGILN-QMKSDGIKP-DIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y+ IR L + +K +L Q K D IK D V M+L G ++ A +LFDE
Sbjct: 93 YSAFIRRLREAKKFSTIHEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEH--AHKLFDE 150
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-EELGSKPDVITYNTLLQALCKVR 325
+ L V ++N ++ ++ K + E+LG PD++TYNT+++ALC+
Sbjct: 151 MPELNCERTVKSFNALLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYNTMIKALCRTG 210
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + + +E++ G +L +++ +++ + +E + + +K L ++
Sbjct: 211 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLAPNIRSYN 270
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ GL + A++L+ M + +SP + A + +
Sbjct: 271 SRVRGLTRNKKFTDAIDLINVMKTEGISPDVHTYNAFITA 310
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 150/319 (47%), Gaps = 27/319 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV--------------GFAIE 155
++F +I Y ++ +D++ + +++P +V GF E
Sbjct: 71 YVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEE 130
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
L C G+ ++++ S C++ ++ + + K G +V + ++
Sbjct: 131 SLEC----GYPASLYFFNILMHSFCKEGEIRLAQ--SVFDAITKWGLRPSVVSFNTLMNG 184
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+K + + + M++ G++PD+ Y++++NG+ + ELFDE+L GLVP+
Sbjct: 185 YIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPN 244
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+ I+G CK V+ +++ M PD++TYNTL+ LCK +L + ++L+
Sbjct: 245 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLID 304
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG+ + TY+ +IDG +GD+ A + + + + I GLCQ G
Sbjct: 305 EMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEG 364
Query: 396 LVRKALELLKQMADKDVSP 414
A ++L++M + P
Sbjct: 365 RSVDAEKMLREMLSVGLKP 383
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ +FD + GL P V ++N +NG K ++ ++ M+ G +PDV TY+ L+
Sbjct: 159 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLIN 218
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK +++ EL EM G+V N T++ +IDG G + A + ++ L++ L
Sbjct: 219 GLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSP 278
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I GLC++G +++A +L+ +M+ K + P + L+ S + D + T+F
Sbjct: 279 DLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD-LETAF 335
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 2/217 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M G D T S++++ +C++ + D+ EM G V +T +I K
Sbjct: 201 MQASGVQPDVYTYSVLINGLCKESKM--DDXNELFDEMLDXGLVPNGVTFTTLIDGHCKN 258
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V A+ I QM S + PD+V Y ++ G+ + D +A++L DE+ + GL PD TY
Sbjct: 259 GRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITY 318
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+G CK+ ++E + M + + D + Y L+ LC+ ++++EM
Sbjct: 319 TTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 378
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
G+ + TY+++I+ KGD+ L++E G
Sbjct: 379 VGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDG 415
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
E+ + M++ G +G T + ++ C+ + D + ++M +V Y +I
Sbjct: 231 ELFDEMLDXGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLVTYNTLIY 288
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 289 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRL 348
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +L+
Sbjct: 349 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLM 408
Query: 335 KEMKWKGIVLNLQTYSIMIDG 355
KEM+ G V ++ TY+++++G
Sbjct: 409 KEMQRDGYVPSVVTYNVLMNG 429
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 160/365 (43%), Gaps = 25/365 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDS- 135
P Y+ +IK L +N + + S L H + P I + L+ + R D+
Sbjct: 66 PHNAVYNTIIKGLCDNGR---VDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDAS 122
Query: 136 ---------------VNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
V I F ++ + A+ + N M+ + D T ++++
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182
Query: 180 CEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
C+Q R +LL QEM K G + Y ++ SLVK K DA + M K
Sbjct: 183 CKQERPQDGAKLL---QEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P + ++++ A ELF + G +PD+YTYN+ I+G C+ N ++ ++
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M E G PDV+TYN+++ LCK +++ E+ + ++ G L++ T S +IDGL
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+ +A LL E G + I G C+ + K+L +M DK P
Sbjct: 360 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 419
Query: 419 WEALL 423
+ ++
Sbjct: 420 YSIVI 424
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 4/261 (1%)
Query: 164 GFCV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
G C D T S +++ C+ RD + + EM+K G Y +I+ L +V
Sbjct: 27 GLCSPDSITYSTLINGFCKARDFQ--QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRV 84
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
AL M+ P ++ YT++++ + A + ++++ G P+V TYN
Sbjct: 85 DSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTL 143
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
ING CK N++ + + M E PDV TYN L+ CK +L++EM G
Sbjct: 144 INGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 203
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
N TY+ ++D L G I+A L + L + F+ I C+ G + A E
Sbjct: 204 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 263
Query: 403 LLKQMADKDVSPGARVWEALL 423
L + M D+ P + ++
Sbjct: 264 LFQLMTDRGCLPDIYTYNIMI 284
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 148/327 (45%), Gaps = 36/327 (11%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHI----EKRENFETPE-FIFIDLIKTYADAH 130
C P Y+ +I + FC + ++ + + + EN +P+ F + LI Y
Sbjct: 133 CAPNVVTYNTLI------NGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQE 186
Query: 131 RFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDG---------KTC------- 172
R QD L ++ K+ N + + +++ ++ G +D + C
Sbjct: 187 RPQDGAKLLQEMVKYGCEPNFITYNT-LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTF 245
Query: 173 SLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+L++ C+ Q DL+ + Q M G + Y +I + ++ DA +L
Sbjct: 246 NLMIDMFCKVGQLDLAYE----LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M G PD+V Y +++G+ +A E+++ L G DV T + I+GLCK
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ K++ ME GS PDV+ Y L+ CK +L++ EM KG V + TYS
Sbjct: 362 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYS 421
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGL 377
I+ID L + + C LL+ L +G+
Sbjct: 422 IVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 170/395 (43%), Gaps = 31/395 (7%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C P Y +I + F +LD +EKR ++ +IK D R DS
Sbjct: 29 CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKR-GIVPHNAVYNTIIKGLCDNGRV-DS 86
Query: 136 VNLFYK---------IPKFRI--------NRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+ Y+ + + I R+ A IL MI G + T + +++
Sbjct: 87 ALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 146
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
C+ ++ DE + +M + + Y +I K+E+ D +L +M G +
Sbjct: 147 FCKLGNM--DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 204
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P+ + Y +++ ++ Y+ A L +L P +T+N+ I+ CK ++ ++
Sbjct: 205 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 264
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M + G PD+ TYN ++ C+ ++ R+L++ M G ++ TY+ ++ GL
Sbjct: 265 FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCK 324
Query: 359 KGDIIEACGLLEEALNKG----LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ EA + E N G + T S++ D GLC+ + A +LL++M +P
Sbjct: 325 ASQVDEAYEVYEVLRNGGYFLDVVTCSTLID----GLCKSRRLDDAEKLLREMERNGSAP 380
Query: 415 GARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+ +L+ K D ++ S + ++L+ C
Sbjct: 381 DVVAY-TILIHGFCKADQLDKS-LAFFSEMLDKGC 413
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 3/239 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ + V+K+K +A + PD + Y+ ++NG D+ +A L DE+ G
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+VP YN I GLC V++ + M+ P VITY L+ ALCK ++
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISDAS 122
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
++++M G N+ TY+ +I+G G++ EA L + L ++ I G
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
C++ + +LL++M P + L+ S V +++ L +L CK
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA--FNLAQMMLRRDCK 239
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 7/289 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A+ I + MI GF CS ++ + +++L +E ++ LG
Sbjct: 303 RMEELEMALRITHDMIRLGFVPSEANCSFMIDEL-RKKELV-EEAFSLACKLGDLGMVPN 360
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I L K E+ DA + +M G++P+ V Y ++++ + + A LFD
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ VY YN ING CKQ +++ +++ M + G P +Y+ L+ LC+
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L+ EL +EM +GI N T++ +I+G + EA L ++ ++ + F+
Sbjct: 481 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 540
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL-----LLSSVSK 429
I G C G +RKA +L QM + + P + +L L S VSK
Sbjct: 541 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 589
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I + A ++ + M+ G +D + + + CE R+L D G V M+ G
Sbjct: 198 KIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL--DGARGLVVRMESEGVKAS 255
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ L K +V +A+ + N M + G+ D V Y ++ G E+ A +
Sbjct: 256 AVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITH 315
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ LG VP + I+ L K+ VE + + +LG P+V YN L+ LCK
Sbjct: 316 DMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNE 375
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L KEM +G+ N TY+I+I L +G I +A L ++ +KG+ ++
Sbjct: 376 RFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYN 435
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C++G + +A LL M + ++P A + L+
Sbjct: 436 SLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 473
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 171/382 (44%), Gaps = 32/382 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLD-HIEKRE-NFETPEFIFIDLIKTYADAHRFQDS 135
P +Y +I L N D+SS ++ H E E + F LI + + ++
Sbjct: 464 PTAASYSPLIAGLCRNG---DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520
Query: 136 VNLFYKIPKFRI--NRVGF---------------AIEILNCMINDGFCVDGKTCSLILSS 178
LF K+ + N V F A ++ + M+ G D T ++S
Sbjct: 521 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C +S FV +++ T ++ ++ + + + ++M G+K
Sbjct: 581 LCLTSGVSKAN--EFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVK 638
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
D+V +T+++ + Q D K+ LF E+ G+ PD Y I+ L K+ N+ I+
Sbjct: 639 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM---IQA 695
Query: 299 IACMEEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ C +++ G P+ +T+ L+ LCK L L KEM ++ N TY+ +D
Sbjct: 696 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDY 755
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
A++GD +E L A+ +G F+ I GLC+ G +++A++L+ ++ + SP
Sbjct: 756 FATEGD-MEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPD 814
Query: 416 ARVWEALLLSSVSKLDFVNTSF 437
+ + ++ + K+ +N +F
Sbjct: 815 C-ISYSTIIHELCKMGDINKAF 835
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 142/337 (42%), Gaps = 21/337 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AY+ +I L +N +F D + + R E E + LI +D++
Sbjct: 359 PNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKRGMIEDALC 417
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
LF K R + + N +IN G+C G S D G + M
Sbjct: 418 LF---DKMRDKGIKVTVYPYNSLIN-GYCKQG----------------SLDRARGLLSGM 457
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K G Y+ +I L + + + + +M GI + +T ++NG +
Sbjct: 458 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 517
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A LFD+++ ++P+ T+NV I G C N+ ++ M E+G KPD TY +L
Sbjct: 518 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 577
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LC +++ E V +++ VLN + + ++ G +G E L +E +G+
Sbjct: 578 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 637
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
F + ++ K+ L ++M ++ V P
Sbjct: 638 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 674
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 40/310 (12%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
EF+ DL +YA + F + L Y FR R + + M G +D + ++I
Sbjct: 592 EFV-ADLENSYAVLNNFSLTA-LLYGF--FREGRFTETYHLWDEMAVRGVKLDLVSFTII 647
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ + +Q D +L +EMK+ G + YT +I +L K+E + AL +QM D
Sbjct: 648 VYAALKQHDKEKSCVL--FREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 705
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY------------- 282
G P+ V +T+++N + AE L E+L ++P+ +TYN +
Sbjct: 706 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 765
Query: 283 ---------------------INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
I GLCK ++ I +++ + E G PD I+Y+T++ L
Sbjct: 766 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 825
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK+ ++N+ EL EM +KG+ ++ Y+I I G+ +A G+ + G+
Sbjct: 826 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 885
Query: 382 SMFDETICGL 391
+ + G+
Sbjct: 886 DTYRALLSGI 895
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 1/220 (0%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ ++ SLVK + A + ++M G+ D YT + + A L +
Sbjct: 190 SQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMES 249
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ YNV + GLCK V+ +++ M +G D +TY TL+ C++ EL
Sbjct: 250 EGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEM 309
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ +M G V + S MID L K + EA L + + G+ ++ I
Sbjct: 310 ALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALID 369
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
LC+ A L K+MA + + P V A+L+ ++ K
Sbjct: 370 KLCKNERFDDADRLFKEMAGRGLEPN-EVTYAILIHALCK 408
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L S GI + + +L ++ + A +LFD++L G+ D Y Y I C
Sbjct: 173 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 232
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ N++ ++ ME G K + YN L+ LCK + E+ M G+ +
Sbjct: 233 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 292
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY ++ G ++ A + + + G + I L ++ LV +A L ++
Sbjct: 293 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKL 352
Query: 408 ADKDVSPGARVWEALL 423
D + P + AL+
Sbjct: 353 GDLGMVPNVFAYNALI 368
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 154 IEILNC---MINDGFCVDGKTCSLILSSVCEQRDLSSDELL------GFVQEMKKLGFCF 204
I+ LNC M+ DG+ + T +++++++C+ L S ELL G V K CF
Sbjct: 693 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 752
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+DY + K + + A+ G IV + +++ G+ +A +L
Sbjct: 753 --LDYFATEGDMEKAKDLHSAM-------LQGHLASIVSFNILIKGLCKAGKIQEAIDLM 803
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G PD +Y+ I+ LCK ++ ++ M G KPDV+ YN ++ C V
Sbjct: 804 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR-WCNV 862
Query: 325 R-ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA---SKG 360
E ++ + M G+ N TY ++ G++ SKG
Sbjct: 863 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKG 902
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 133/273 (48%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C++ D+ + + K G +V Y
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKEGDIRVAQ--SVFDAITKWGLRPSVVSYN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G+ PD+ Y++++NG+ + A +LFDE+L
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD++TYN L+ LCK +L +
Sbjct: 242 GLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM G+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 302 HDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P R + ++
Sbjct: 362 LCQEGRSVDAEKMLREMLSVGLKPDTRTYTMII 394
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 110/222 (49%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
FC V+ L+K + G ++ G + + ++++ + D A+
Sbjct: 103 FCVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQ 162
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+FD + GL P V +YN +NG + +++ G ++ + M G PDV TY+ L+ L
Sbjct: 163 SVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGL 222
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK +++ +L EM KG+V N T++ +IDG G + A + ++ L++ L
Sbjct: 223 CKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDL 282
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GLC++G +++A +L+ +M+ + P + L+
Sbjct: 283 VTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLI 324
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M G D T S++++ +C++ + D+ EM + G
Sbjct: 189 RLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKM--DDANKLFDEMLEKGLVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K V A+ I QM S + PD+V Y ++ G+ + D +A +L D
Sbjct: 247 SVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ +++ + M + + D + Y L+ LC+
Sbjct: 307 EMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + +TY+++I+ KGD+ + LL+E G
Sbjct: 367 RSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I L KK + A ++++M G+KPD + YT +++G + D A E
Sbjct: 282 LVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRK 341
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + D Y I+GLC++ KM+ M +G KPD TY ++ CK
Sbjct: 342 MMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKG 401
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ + +L+KEM+ G V ++ TY+++++G
Sbjct: 402 DVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 199/471 (42%), Gaps = 70/471 (14%)
Query: 2 VRSSALKRANLHLRKHRKWPLSPYKAK-WHQTLDQQQAKQNVK----------QSLTTPP 50
+ S A K NL L + +P+ ++ W + ++ N+ QS P
Sbjct: 9 IASKAKKFLNLCLLEKGNRVTAPFISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPS 68
Query: 51 TKQQQQI------PKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLD 104
+ ++ K ++ SL H+ I Y+ VI L S+F SV+
Sbjct: 69 IVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVG 128
Query: 105 HIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDG 164
+ K +E LI + +R +V+L K+ + R + I N +I DG
Sbjct: 129 KMMK-FGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK---LDVVIYNTII-DG 183
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
FC G L ++ L+ F M++ G V Y +++ L + D
Sbjct: 184 FCKTG---------------LVNNALVLF-GRMERDGVRADTVTYNSLVTGLCCSGRRSD 227
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A ++ M I P+++ +T ++N + + +++A++ ++E++ + PDV+TYN I+
Sbjct: 228 AARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIH 287
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLC V+ +++ M G PDV+TYNTL+ CK + ++ +LV+EM +G+V+
Sbjct: 288 GLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVV 347
Query: 345 --------------------------------NLQTYSIMIDGLASKGDIIEACGLLEEA 372
N++TYSI++ GL + +A L E
Sbjct: 348 DTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESM 407
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + ++ I G+C G V A +L ++ K + P + ++
Sbjct: 408 QKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMI 458
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P IV ++ +L+ + ++Y LF + + G+ D+YTYN+ IN LC+ + + +
Sbjct: 67 PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M + G +PDV+T ++L+ C+ + +LV +M+ L++ Y+ +IDG
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + A L G+ + ++ + GLC G A L++ M +D+ P
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT 246
Query: 419 WEALLLSSVSKLDFV 433
+ AL+ + V + F+
Sbjct: 247 FTALINAFVREGKFL 261
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 97/191 (50%), Gaps = 5/191 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +IL+ M+ G D T + +++ C+ + + DE V+EM + G V + +
Sbjct: 298 AKQILDLMVTKGCFPDVVTYNTLINGFCKTKRV--DEGTKLVREMSQRGLVVDTVTFNTI 355
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ + + A I ++M G +P+I Y+++L G+ KA LF+ + +
Sbjct: 356 IQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEM 412
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D+ TYN+ I+G+C NVE + + G +PDV+TY T++ C+ R ++
Sbjct: 413 ELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADF 472
Query: 333 LVKEMKWKGIV 343
L ++M+ G++
Sbjct: 473 LYRKMQEDGLL 483
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 203 CF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
CF +V Y +I K ++V + ++ +M G+ D V + ++ G A+
Sbjct: 310 CFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQ 369
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
E+F + G P++ TY++ + GLC VE + + M++ + D+ TYN ++ +
Sbjct: 370 EIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGM 426
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
C + + +L + +KG+ ++ TY+ MI G K
Sbjct: 427 CMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK 464
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 196/450 (43%), Gaps = 61/450 (13%)
Query: 27 AKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNC---------- 76
+ +H+ LD++ + V S + Q + K +L++++ + + NC
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGY 276
Query: 77 ---EPPPEAYHFVIKTLAENSQ--FCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHR 131
E P EA F+ K ++ + +S++D++ K IF + K
Sbjct: 277 CSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK-----RG 331
Query: 132 FQDSVNLFYKIPKFRINRVGFAIE---ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD 188
+ + + + + + G +E +L+ M+ +G D ++++ + +Q + D
Sbjct: 332 LEPDIATYCTLLQGYATK-GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKV--D 388
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +M++ G +V Y VI L K V DA+ QM +G+ P+I+ YT ++
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448
Query: 249 NGVIVQEDYVKAEEL-----------------------------------FDELLVLGLV 273
+ + + + + KAEEL FD ++ +G+
Sbjct: 449 HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVK 508
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P+V TY+ I+G C ++ K+++ M +G KPD +TYNTL+ C+V ++ L
Sbjct: 509 PNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALAL 568
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
KEM G+ N+ TY+I++ GL A L G + S ++ + GLC+
Sbjct: 569 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
L +AL + + + D+ R + ++
Sbjct: 629 NNLTDEALRMFQNLCLTDLQLETRTFNIMI 658
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 159/343 (46%), Gaps = 21/343 (6%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVD 168
++ F F L+K R D++++ + R+ L+CM D
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR----RMTE-------LSCM------PD 157
Query: 169 GKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+C+++L +C E R + ELL + + + G +V YT VI K+ A
Sbjct: 158 VFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++M I PD+V Y+ ++ + + KA E+ ++ G++P+ TYN ++G C
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ I + M G +PDV+TYN+L+ LCK R++ M +G+ ++
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY ++ G A+KG ++E LL+ + G+ +F+ IC ++ V +A+ + +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397
Query: 408 ADKDVSPGARVWEAL--LLSSVSKLDFVNTSFIRLVDQILNTP 448
++P + A+ +L +D F +++D+ L TP
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL-TP 439
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 5/281 (1%)
Query: 148 NRVGFAIEILNCMIND---GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
NR A+E+L+ M +D G D + + +++ ++ D SD+ EM
Sbjct: 172 NRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD--SDKAYSTYHEMLDRRISP 229
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y+++I +L K + + A+ +L M +G+ P+ + Y +L+G E +A
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL 289
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G+ PDV TYN ++ LCK K+ M + G +PD+ TY TLLQ
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L + L+ M GI + ++I+I A + + EA + + GL +
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I LC+ G V A+ +QM D+ ++P V+ +L+ S
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 20/253 (7%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+C+ GK DE + M +G V Y +I + ++
Sbjct: 519 DGYCLAGKM----------------DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DAL + +M S G+ P+I+ Y ++L G+ A+EL+ + G ++ TYN+
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNII 622
Query: 283 INGLCKQNNVEAGIKMIA--CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
++GLCK N + ++M C+ +L + + T+N ++ AL KV + ++L
Sbjct: 623 LHGLCKNNLTDEALRMFQNLCLTDL--QLETRTFNIMIGALLKVGRNDEAKDLFVAFSSN 680
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G+V N TY +M + + +G + E L + G S M + + L QRG + +A
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Query: 401 LELLKQMADKDVS 413
L + +K S
Sbjct: 741 GTYLSMIDEKHFS 753
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 75/191 (39%), Gaps = 39/191 (20%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE----- 326
+ P V+TY + I C+ ++ G + + + G + + IT+ LL+ LC +
Sbjct: 83 VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 327 ---LNRLREL-------------------------------VKEMKWKGIVLNLQTYSIM 352
L R+ EL + + + G ++ +Y+ +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G +GD +A E L++ + + I LC+ + KA+E+L M V
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262
Query: 413 SPGARVWEALL 423
P + ++L
Sbjct: 263 MPNCMTYNSIL 273
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 95/213 (44%), Gaps = 2/213 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R++R+ A+ + M++ G + T ++IL + R ++ + L +V + K G
Sbjct: 558 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL-YVG-ITKSGTQLE 615
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++ L K +AL + + ++ + + +++ ++ +A++LF
Sbjct: 616 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFV 675
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
GLVP+ +TY + + Q +E ++ ME+ G D N +++ L +
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
E+ R + + K L T S+ ID L+
Sbjct: 736 EITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 156/339 (46%), Gaps = 22/339 (6%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
++ +++ L ++F ++ + K EN E I + + + Y HR DS+ +F+K
Sbjct: 53 SFGYMVSRLVSANKFKAAEDIVARM-KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHK 111
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ F + K +L+ + E+ L + F + M+++G
Sbjct: 112 MKDFDCDP------------------SQKAYVTVLAILVEENQL--NLAFKFYKNMREIG 151
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDA-LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
+ +I++L + + DA L I ++M G PD Y +++G+ +A
Sbjct: 152 LPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEA 211
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
++LF E++ P V TY INGLC NV+ ++ + M+ G +P+V TY++L+
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDG 271
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK + EL + M +G N+ TY+ +I GL + I EA LL+ +GL
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ ++ + I G C R+A L +M ++P W
Sbjct: 332 AGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTW 370
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 159/364 (43%), Gaps = 28/364 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ H ++C+P +AY V+ L E +Q ++ + I L T
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMRE-----------IGLPPTV 156
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A S+N+ K V ++I + M G D T ++S +C R
Sbjct: 157 A-------SLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLC--RFGR 207
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE EM + +V YT++I L + V +A+ + +MK GI+P++ Y+
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSS 267
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ ++A ELF+ ++ G P++ TY I GLCK+ ++ ++++ M G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI-------MIDGLASK 359
KPD Y ++ C V + + EM GI N T++I ++ GL +
Sbjct: 328 LKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTN 387
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
A L ++G+ + D + LC++G +KA++L+ ++ P W
Sbjct: 388 YP-SRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTW 446
Query: 420 EALL 423
+ L+
Sbjct: 447 KLLI 450
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 23/366 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SL+ S + P Y+ VI L +N + V +EK+ + LI
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK-GIRADAVTYNTLISG 228
Query: 126 YADAHRFQDSVNLFYKIPKFRIN-RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+++ R+ D+ L + K +I+ V F +++ + +G ++ E R+
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG-------------NLLEARN 275
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L +EM + + Y ++I + DA + + M S G PD+V Y
Sbjct: 276 L--------YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ G + +LF E+ GLV D +TYN I+G C+ + K+ M +
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD++TYN LL LC ++ + +V++++ + +++ TY+I+I GL + E
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A L KG+ + + I GLC++GL R+A +L ++M + P R+++ L
Sbjct: 448 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Query: 425 SSVSKL 430
+ L
Sbjct: 508 DHYTSL 513
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 112/236 (47%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ +M+ LG + +T +I + ++ AL +L +M G +P IV +
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG + +A L D + G VP+V YN INGLCK ++ +++ CME+ G
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 215
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ D +TYNTL+ L L+++M + I N+ ++ +ID +G+++EA
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E + + + ++ I G C G + A + M K P + L+
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 134/299 (44%), Gaps = 4/299 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + + M N G D + ++++ C R L + +M KLGF
Sbjct: 91 KMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFC--RCSRLSLALALLGKMMKLGFRPS 148
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +++ + + +A+ +++ M G P++V Y V+NG+ D A E+F
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G+ D TYN I+GL +++ M + P+VI + L+ K
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L R L KEM + +V N+ TY+ +I+G G + +A + + ++KG ++
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
I G C+ V ++L +M + + A + L+ KL+ F R+VD
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 133/322 (41%), Gaps = 19/322 (5%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL-NC----------------MI 161
F ++ A ++F + L++K+ I+ ++ IL +C M+
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
GF T +L+ C+ E + V M GF +V Y VI L K
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQ--EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ +AL + M+ GI+ D V Y +++G+ + A L +++ + P+V +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+ K+ N+ + M P+V TYN+L+ C L + + M KG
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
++ TY+ +I G + + L E +GL + ++ I G CQ G + A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 402 ELLKQMADKDVSPGARVWEALL 423
++ +M D VSP + LL
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILL 401
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +R+ + K DA + +M P IV +T VL + + L+ ++
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
LG+ D+Y++ + I+ C+ + + + ++ M +LG +P ++T +LL C+
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
LV M G V N+ Y+ +I+GL D+ A + KG+ + ++ I
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL G A LL+ M + + P + AL+
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 183/436 (41%), Gaps = 54/436 (12%)
Query: 3 RSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPH 62
RSS + NL + P+ ++ H L+Q+ A Q + Q +
Sbjct: 75 RSSVV---NLQSKPISTTPVPTHQHIAHLILEQKSASQAL-------------QTFRWAS 118
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
L + +H+ S Y +I L +F + VLD + E IF+ +
Sbjct: 119 NLPNFIHNQSTYRA---------LIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTI 169
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC--------------------MIN 162
++ A + + + I KF N +++I N M+
Sbjct: 170 VRGLGRARMVRQMIKVLDLITKFGENP---SLKIFNSILDVLVKEDIDLAREFYRKKMMM 226
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
+G D T +++ +C + + +Q MK G V Y +I +L K KV
Sbjct: 227 NGVSGDDYTFGILMKGLCLTNRIG--DAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKV 284
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
A ++N+M ++P V + ++++ +E+ V+A L ++ +G VPDV T
Sbjct: 285 GRARSLMNEM----VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKV 340
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
+ LCK V G++++ +E +G DV+ YNTL++ C + + ++K+M+ KG
Sbjct: 341 VGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGC 400
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ N+ TY+I+ G G + A L + G+ +D I GLC G + +
Sbjct: 401 LPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFK 460
Query: 403 LLKQMADKDVSPGARV 418
+L+ M + G R+
Sbjct: 461 ILELMEESRGGAGGRI 476
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 12/279 (4%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+RV +EI C+ N VD T +++ S C+ L D + +MK G + +
Sbjct: 389 HRVLKDMEIKGCLPN----VD--TYNILASGYCDSGML--DSAIDLFNDMKTDGINWNFM 440
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSD--GIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +IR L ++ D IL M+ G I Y ++ G+ + + +A E
Sbjct: 441 TYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLT 500
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ L P ++ I G C + ++ ++ M + G P V+ Y L+ C+
Sbjct: 501 KME--KLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDG 558
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ EL+ EM G T++ +I +G + A L+E+ + +G +
Sbjct: 559 NVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYS 618
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
+ LC +G +KA+ L QM +KD+ P W ++LL
Sbjct: 619 PMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLL 657
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E L F+ +M+KL VD + I + + DA + +QM +G P ++ Y +
Sbjct: 493 EEALEFLTKMEKL--FPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCL 550
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G + +A EL +E++ G P T+N I+ C Q V + +K++ M G
Sbjct: 551 IHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGC 610
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD+ +Y+ ++ ALC + + L +M K I+ + T++ M+ L + +E
Sbjct: 611 LPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDN 670
Query: 368 LLEEALNKG 376
L L G
Sbjct: 671 LFHLQLQDG 679
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 149/284 (52%), Gaps = 2/284 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A L+ M N G + T S ++ ++C++ L + + F+ +M+++G YT++
Sbjct: 341 AFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQ--QAIKFLLDMRRVGLSPNEFTYTSL 398
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K + DAL + ++M + ++V YT +L+G+ + ++AE+LF ++ G+
Sbjct: 399 IDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGV 458
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ TY ++G K VE ++++ ++E KPD++ Y T++ LC +L
Sbjct: 459 TPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEF 518
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ EMK GI N Y+I +D G +EA LL+E + G+ F I GLC
Sbjct: 519 VMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLC 578
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
++GLV +A++ +MAD ++ P L+ + K +++ +
Sbjct: 579 KKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAA 622
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 149/335 (44%), Gaps = 20/335 (5%)
Query: 84 HFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFYKI 142
+F +K L + + V + + N P F +F L + + +++ F ++
Sbjct: 149 NFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRM 208
Query: 143 PKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+FR+ + + + M+ G T ++++ +C++ D+
Sbjct: 209 TRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDM 268
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ + L +MK++G +V Y ++I K + ++ + +MK G +PD++ Y
Sbjct: 269 VTAKSL--FHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYN 326
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++N E KA E+ GL P+V TY+ I+ LCK++ ++ IK + M +
Sbjct: 327 ALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRV 386
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P+ TY +L+ A CK L+ +L EM + N+ TY+ ++DGL +G ++EA
Sbjct: 387 GLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEA 446
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
L + G+ + + G + V A
Sbjct: 447 EDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENA 481
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 164/383 (42%), Gaps = 31/383 (8%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCD-ISSVLDHIEKREN 111
+ +Q+PK H L + +S +P Y +I L + I +LD +R
Sbjct: 334 KYEQMPKAFHFLHEMKNS----GLKPNVVTYSTLIDALCKEHMLQQAIKFLLDM--RRVG 387
Query: 112 FETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT 171
EF + LI A D++ L ++ + + VGF + ++ DG C +G+
Sbjct: 388 LSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQ---VGFNVVTYTTLL-DGLCKEGRM 443
Query: 172 C-------SLILSSVCEQRDLSSDELLGFVQEMK------------KLGFCFGMVDYTNV 212
++I + V + + G ++ + + ++ Y +
Sbjct: 444 MEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTI 503
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + K+ + ++++MK+ GI+ + V YT+ ++ V+A L E+ LG+
Sbjct: 504 IWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGV 563
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT-LLQALCKVRELNRLR 331
+ T+ V I+GLCK+ VE I A M + +P+ + T L+ LCK + +
Sbjct: 564 EVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAK 623
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L EM+ K +V + Y+ +IDG D EA + G+ + + GL
Sbjct: 624 KLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGL 683
Query: 392 CQRGLVRKALELLKQMADKDVSP 414
Q LV++A L +M K + P
Sbjct: 684 SQGNLVQQARMFLNEMIGKGIVP 706
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 111/242 (45%), Gaps = 13/242 (5%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I+ +C Q L E + + EMK G V YT + + K K +AL +L +M
Sbjct: 503 IIWGLCSQNKLEECEFV--MSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCD 560
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD-VYTYNVYINGLCKQNNVE 293
G++ IV + ++++G+ + +A + F + L P+ V I+GLCK N +E
Sbjct: 561 LGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIE 620
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
A K+ M++ PD I Y L+ K ++ + M G+ L+L Y+ ++
Sbjct: 621 AAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLV 680
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR-----GLVRKALELLKQMA 408
GL+ + +A L E + KG+ DE +C R G + +A+EL ++
Sbjct: 681 WGLSQGNLVQQARMFLNEMIGKGIVP-----DEILCIRLLRKYYELGSIDEAIELHDELL 735
Query: 409 DK 410
K
Sbjct: 736 KK 737
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 95/243 (39%), Gaps = 18/243 (7%)
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYTMV---------- 247
K GFC Y ++ L FDA L ++ S I P + ++
Sbjct: 122 KFGFCLTTESYCLLVHILFYARMYFDANFFLKELISSRRILPGFDVFEVLWSTRNVCVPG 181
Query: 248 ------LNGVIVQEDYV-KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
L V ++ + +A + F + + P + N ++ L K + K
Sbjct: 182 FGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFR 241
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M G V TYN ++ +CK ++ + L +MK G+ ++ TY+ +IDG G
Sbjct: 242 DMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLG 301
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+ E+ L EE + G ++ I C+ + KA L +M + + P +
Sbjct: 302 LLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYS 361
Query: 421 ALL 423
L+
Sbjct: 362 TLI 364
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 9/298 (3%)
Query: 128 DAH--RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
DAH F L + + K R R+ A+++L M++ D T ++++ S+C +
Sbjct: 33 DAHPPDFLTYTKLVHGLSKAR--RLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRV 90
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D+ V+EM G + Y+ ++ L K E++ +A+ ++ M G P +V Y
Sbjct: 91 --DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYN 148
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G +A ++++ G PD+ TY I G CK +V G++++ +
Sbjct: 149 SIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRR 208
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G PD++TY+T++ LCK L ++ +EM + TY+ +I G GD+ EA
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI---TYNSLIGGYCRAGDMDEA 265
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL + ++ + + C+ G + A EL +QM +SP + +L+
Sbjct: 266 IRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 323
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 121/241 (50%), Gaps = 5/241 (2%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT ++ L K ++ DA+ +L +M S PD T+V+ + + + A EL +E+L
Sbjct: 42 YTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEML 101
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ + TY+ ++GLCK ++ + ++ M E G P V+TYN+++ C+ R ++
Sbjct: 102 HRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVD 161
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+++M +G ++ TY+ +I G D+ LL E +G + I
Sbjct: 162 EAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVI 221
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTP 448
GLC+ G +R A+++ ++M+ +P A + +L+ D IRL+ ++++
Sbjct: 222 DGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDM--DEAIRLLGKMVDDK 276
Query: 449 C 449
C
Sbjct: 277 C 277
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 142/316 (44%), Gaps = 40/316 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGFCF 204
R RV A + M+ +G D T + ++ C+ RD+ ELLG E+ + GF
Sbjct: 156 RARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLG---EVTRRGFTP 212
Query: 205 GMVDYTNVIRSLVKKEKVFDALGI--------------------------------LNQM 232
+V Y+ VI L K ++ DA+ I L +M
Sbjct: 213 DIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
D PD+V YT +++ A ELF +++ L PDV T+ ++GLC + +
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
E ++++ + G P + TYN ++ CK ++ + ELV + + +G V N TY+I+
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNIL 392
Query: 353 IDGLASKGDIIEACGLLEEALNK--GLC-TQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ G G +A L++ LN G C T +M+ + LC+ G A++ ++M
Sbjct: 393 VAGCCRAGRTDQALQYLDQ-LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 451
Query: 410 KDVSPGARVWEALLLS 425
+ P A + ++ +
Sbjct: 452 RGYVPAAATFATVVFA 467
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 139/298 (46%), Gaps = 23/298 (7%)
Query: 147 INRVGFAIEILN-CMINDGFCVDGK------------------TCSLILSSVCEQRDLSS 187
+ R GF +I+ + DG C G+ T + ++ C D+
Sbjct: 205 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDM-- 262
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + + +M +V YT ++ + K ++ DA + QM ++ + PD+V +T +
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 322
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G+ + A EL +E+ G P +YTYN ++G CK N V +++A G
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKG--IVLNLQTYSIMIDGLASKGDIIEA 365
P+ +TYN L+ C+ ++ + + ++ +G ++ Y+I++D L G +A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EE + +G ++ F + LC+ ++A ELL++M +PG +A++
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVV 500
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 155/361 (42%), Gaps = 37/361 (10%)
Query: 81 EAYHFVIKTLAENSQ------------FCDISSVLDHIE-----KRENFETPEFI-FIDL 122
EA+ F+ + +AE FC V +E R F TP+ + + +
Sbjct: 162 EAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGF-TPDIVTYSTV 220
Query: 123 IKTYADAHRFQDSVNLFYKIP--------------KFRINRVGFAIEILNCMINDGFCVD 168
I A R +D+V++F ++ R + AI +L M++D D
Sbjct: 221 IDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPD 280
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + ++S+ C+ L D+ Q+M +V +T+++ L + ++ DAL +
Sbjct: 281 VVTYTTLMSAFCKMGRL--DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALEL 338
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L ++ G P I Y V++G KAEEL + G VP+ TYN+ + G C+
Sbjct: 339 LEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 398
Query: 289 QNNVEAGIKMIACM-EELGSKP-DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
+ ++ + + E G P V Y +L ALC+ + + +EM +G V
Sbjct: 399 AGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAA 458
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
T++ ++ L +A LLEE + G D + C+ G+++KA EL +
Sbjct: 459 ATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 518
Query: 407 M 407
+
Sbjct: 519 L 519
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 1/210 (0%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G + + VI L + ++ ALG+ QM +D PD + YT +++G+ A ++
Sbjct: 4 GTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVL 62
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E++ VPD T V + LC + V+ +++ M G + ITY+ L+ LCK
Sbjct: 63 QEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKC 122
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L+ LV+ M +G + TY+ +I G + EA G +E+ + +G +
Sbjct: 123 ERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITY 182
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSP 414
I G C+ V + LELL ++ + +P
Sbjct: 183 TALIGGFCKSRDVGRGLELLGEVTRRGFTP 212
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 72/185 (38%), Gaps = 36/185 (19%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL------ 327
P +NV I GLC+ + + + M + PD +TY L+ L K R L
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 328 -----------------------------NRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ RELV+EM +G+ N TYS ++DGL
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+ EA L+E +G ++ I G C+ V +A ++QM + P
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181
Query: 419 WEALL 423
+ AL+
Sbjct: 182 YTALI 186
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 105/252 (41%), Gaps = 27/252 (10%)
Query: 94 SQFCDISSVLDHIEKRE----NFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRIN 148
S FC + + D E + N +P+ + F L+ R +D++ L +I +
Sbjct: 289 SAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR---R 345
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
I NC++ DG+C + ++EL V + + GF V
Sbjct: 346 GCPPTIYTYNCVV-DGYCKANQV-------------RKAEEL---VADFRSRGFVPNTVT 388
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y ++ + + AL L+Q+ S+G + Y ++L+ + A + ++E
Sbjct: 389 YNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 448
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G VP T+ + LCK + + +++ M + G P T + ++ A C+
Sbjct: 449 MIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGM 508
Query: 327 LNRLRELVKEMK 338
+ + EL E++
Sbjct: 509 IQKADELASELR 520
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C++ D+ + + K G +V +
Sbjct: 111 GFYEEILEC----GYPASLYFFNILMHRFCKEGDIMVAQ--SVFNAITKWGLRPSVVSFN 164
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + N M + G++PD+ Y++++NG+ + A E+FDE+L
Sbjct: 165 TLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDK 224
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L +
Sbjct: 225 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQA 284
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ EM KG+ + TY+ +IDG +GD+ A + + + + + I G
Sbjct: 285 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISG 344
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ A ++L++M + P + ++
Sbjct: 345 LCQEERYLDAEKVLREMLSVGLKPDTGTYTMII 377
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 110/212 (51%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K + G ++ G + + ++++ + D + A+ +F+ + G
Sbjct: 96 VLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWG 155
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V ++N +NG + +++ G ++ M G +PDV TY+ L+ LCK +++
Sbjct: 156 LRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDAN 215
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E+ EM KG+V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 216 EMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGL 275
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G +++A +L+ +M+ K + P + L+
Sbjct: 276 CKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 2/226 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + N M G D T S++++ +C++ + D+ EM G
Sbjct: 172 RLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKM--DDANEMFDEMLDKGLVPN 229
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 230 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLID 289
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 290 EMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEE 349
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
++++EM G+ + TY+++I+ KGD+ LL+E
Sbjct: 350 RYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 395
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M++ G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 214 ANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLXPDLITYNTL 271
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 272 IYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXI 331
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ K++ M +G KPD TY ++ CK ++ +
Sbjct: 332 RLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSK 391
Query: 333 LVKEMK 338
L+KEM+
Sbjct: 392 LLKEMQ 397
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++L +VC+ E + + EM+ G +V Y +I + ++ +V DA ILN
Sbjct: 189 TYTVLLEAVCKSSGFG--EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILN 246
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
++ S G +PDIV YT VL G+ + + LF E++ VP+ T+++ + C+
Sbjct: 247 RLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGG 306
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
VE I+++ M + G P+ N ++ A+CK ++ + + M G + +Y+
Sbjct: 307 MVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYT 366
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ GL G A LL E + K F+ IC LCQ+GL+ +A++L++ M +
Sbjct: 367 TVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEY 426
Query: 411 DVSPGARVWEALL 423
S G + AL+
Sbjct: 427 GCSVGIVTYNALV 439
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 178/434 (41%), Gaps = 66/434 (15%)
Query: 34 DQQQAKQNVKQSLTTPPTKQQQQ-IPKQPHILSSLLHSFSIY----------NCEPPPEA 82
D + ++ ++PP + P +P +S S C+P
Sbjct: 130 DTAATAASTPRAASSPPCPSRPTPTPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVT 189
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y +++ + ++S F + +VLD E R TP + ++I +N
Sbjct: 190 YTVLLEAVCKSSGFGEAMNVLD--EMRAKGCTPNIVTYNVI------------INGM--- 232
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR------------------- 183
R RV A EILN + + GF D + + +L +C R
Sbjct: 233 --CREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVP 290
Query: 184 -DLSSDELLGF-------------VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+++ D L+ F +Q+M + G VI ++ K+ +V DA L
Sbjct: 291 NEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFL 350
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
N M G PD + YT VL G+ + A+EL E++ P+ T+N +I LC++
Sbjct: 351 NNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 410
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+E IK+I M E G ++TYN L+ C ++ EL + + N TY
Sbjct: 411 GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEP---NTITY 467
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ ++ GL + A LL E + K + F+ + CQ+G V +A+EL+ QM +
Sbjct: 468 TTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 527
Query: 410 KDVSPGARVWEALL 423
+P + LL
Sbjct: 528 HGCTPNLITFNTLL 541
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 160/339 (47%), Gaps = 27/339 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ +Y C P +Y V++ L ++ +L + R+N E F I
Sbjct: 349 FLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM-VRKNCPPNEVTFNTFICIL 407
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------- 170
+ ++ L +P++ + I N +++ GFCV G+
Sbjct: 408 CQKGLIEQAIKLIELMPEYGCS---VGIVTYNALVH-GFCVQGRVDSALELFNNLPCEPN 463
Query: 171 --TCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
T + +L+ +C L ++ ELL EM + V + ++ +K V +A+
Sbjct: 464 TITYTTLLTGLCHAERLDAAAELLA---EMIQKDCPLNAVTFNVLVSFFCQKGFVEEAME 520
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++NQM G P+++ + +L+G+ + +A EL L+ G+ D TY+ ++ L
Sbjct: 521 LVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLS 580
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+++ E I+M+ ++++G +P V YN +L ALCK E ++ + M G + N
Sbjct: 581 REDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNES 640
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
TY I+I+GLA +G + EA +L E KG+ ++S + D+
Sbjct: 641 TYIILIEGLAHEGLLKEARYVLSELYAKGVLSKSLLEDQ 679
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 114/236 (48%), Gaps = 3/236 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
++ + ++ M + G G+V Y ++ + +V AL + N + + P+ + YT +
Sbjct: 414 EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTL 470
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L G+ E A EL E++ + T+NV ++ C++ VE ++++ M E G
Sbjct: 471 LTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC 530
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P++IT+NTLL + K EL+ + KG+ L+ TYS ++D L+ + EA
Sbjct: 531 TPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQ 590
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L + G+ + M+++ + LC+R +A++ M P + L+
Sbjct: 591 MLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 646
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/475 (20%), Positives = 180/475 (37%), Gaps = 76/475 (16%)
Query: 21 PLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILS--------------- 65
P P + T A + S T P Q QP +++
Sbjct: 145 PPCPSRPTPTPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFG 204
Query: 66 ---SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
++L C P Y+ +I + + D +L+ + F+ + +
Sbjct: 205 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY-GFQPDIVSYTTV 263
Query: 123 IKTYADAHRFQDSVNLFYKI--PKFRINRVGF---------------AIEILNCMINDGF 165
+K A R+ D LF ++ K N V F AI++L M G
Sbjct: 264 LKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGC 323
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK------- 218
+ C+++++++C+Q + D+ F+ M G + YT V+R L +
Sbjct: 324 TPNTTLCNIVINAICKQGRV--DDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHA 381
Query: 219 --------------KEKVFD--------------ALGILNQMKSDGIKPDIVCYTMVLNG 250
E F+ A+ ++ M G IV Y +++G
Sbjct: 382 KELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHG 441
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
VQ A ELF+ L P+ TY + GLC ++A +++A M + +
Sbjct: 442 FCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLN 498
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+T+N L+ C+ + ELV +M G NL T++ ++DG+ + EA LL
Sbjct: 499 AVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLH 558
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++KG+ + + + L + +A+++L + D + P ++ +L +
Sbjct: 559 GLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFA 613
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 196/450 (43%), Gaps = 61/450 (13%)
Query: 27 AKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNC---------- 76
+ +H+ LD++ + V S + Q + K +L++++ + + NC
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGY 276
Query: 77 ---EPPPEAYHFVIKTLAENSQ--FCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHR 131
E P EA F+ K ++ + +S++D++ K IF + K
Sbjct: 277 CSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK-----RG 331
Query: 132 FQDSVNLFYKIPKFRINRVGFAIE---ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD 188
+ + + + + + G +E +L+ M+ +G D ++++ + +Q + D
Sbjct: 332 LEPDIATYCTLLQGYATK-GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKV--D 388
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +M++ G +V Y VI L K V DA+ QM +G+ P+I+ YT ++
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448
Query: 249 NGVIVQEDYVKAEEL-----------------------------------FDELLVLGLV 273
+ + + + + KAEEL FD ++ +G+
Sbjct: 449 HSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVK 508
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P+V TY+ I+G C ++ K+++ M +G KPD +TYNTL+ C+V ++ L
Sbjct: 509 PNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALAL 568
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
KEM G+ N+ TY+I++ GL A L G + S ++ + GLC+
Sbjct: 569 FKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
L +AL + + + D+ R + ++
Sbjct: 629 NNLTDEALRMFQNLCLTDLQLETRTFNIMI 658
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 159/343 (46%), Gaps = 21/343 (6%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVD 168
++ F F L+K R D++++ + R+ L+CM D
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR----RMTE-------LSCM------PD 157
Query: 169 GKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+C+++L +C E R + ELL + + + G +V YT VI K+ A
Sbjct: 158 VFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++M I PD+V Y+ ++ + + KA E+ ++ G++P+ TYN ++G C
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ I + M G +PDV+TYN+L+ LCK R++ M +G+ ++
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY ++ G A+KG ++E LL+ + G+ +F+ IC ++ V +A+ + +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397
Query: 408 ADKDVSPGARVWEAL--LLSSVSKLDFVNTSFIRLVDQILNTP 448
++P + A+ +L +D F +++D+ L TP
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL-TP 439
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 5/281 (1%)
Query: 148 NRVGFAIEILNCMIND---GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
NR A+E+L+ M +D G D + + +++ ++ D SD+ EM
Sbjct: 172 NRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD--SDKAYSTYHEMLDRRISP 229
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y+++I +L K + + A+ +L M +G+ P+ + Y +L+G E +A
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFL 289
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G+ PDV TYN ++ LCK K+ M + G +PD+ TY TLLQ
Sbjct: 290 KKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATK 349
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L + L+ M GI + ++I+I A + + EA + + GL +
Sbjct: 350 GALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I LC+ G V A+ +QM D+ ++P V+ +L+ S
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 20/253 (7%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+C+ GK DE + M +G V Y +I + ++
Sbjct: 519 DGYCLAGKM----------------DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
DAL + +M S G+ P+I+ Y ++L G+ A+EL+ + G ++ TYN+
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNII 622
Query: 283 INGLCKQNNVEAGIKMIA--CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
++GLCK N + ++M C+ +L + + T+N ++ AL KV + ++L +
Sbjct: 623 LHGLCKNNLTDEALRMFQNLCLTDL--QLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 680
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G+V +++TYS+M + L +G + E L G S M + + L QRG + +A
Sbjct: 681 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740
Query: 401 LELLKQMADKDVS 413
L + +K S
Sbjct: 741 GTYLSMIDEKHFS 753
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 138/293 (47%), Gaps = 5/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E++ M++ G C++ + I+ S C E R + S++L M ++G ++ Y+
Sbjct: 460 AEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL---MVRIGVKPNVITYST 516
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K+ +A +L+ M S G+KPD V Y ++NG A LF E++ G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P++ TYN+ + GL A ++ + + G++ ++ TYN +L LCK +
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + + + L +T++IMI L G EA L GL + L
Sbjct: 637 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 696
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
++GL+ + +L M + + +R+ +++ + + D +++ ++D+
Sbjct: 697 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDE 749
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 75/191 (39%), Gaps = 39/191 (20%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE----- 326
+ P V+TY + I C+ ++ G + + + G + + IT+ LL+ LC +
Sbjct: 83 VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 327 ---LNRLREL-------------------------------VKEMKWKGIVLNLQTYSIM 352
L R+ EL + + + G ++ +Y+ +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G +GD +A E L++ + + I LC+ + KA+E+L M V
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262
Query: 413 SPGARVWEALL 423
P + ++L
Sbjct: 263 MPNCMTYNSIL 273
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 95/207 (45%), Gaps = 2/207 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R++R+ A+ + M++ G + T ++IL + R ++ + L +V + K G
Sbjct: 558 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL-YVG-ITKSGTQLE 615
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++ L K +AL + + ++ + + +++ ++ +A++LF
Sbjct: 616 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFA 675
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L GLVPDV TY++ L +Q +E + MEE G + N++++ L +
Sbjct: 676 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 735
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIM 352
++ R + + K L T S++
Sbjct: 736 DITRAGTYLSMIDEKHFSLEASTASLL 762
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 142/309 (45%), Gaps = 37/309 (11%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ C D T +++++ +C + L L +++M++ G+ +V Y V+ KK
Sbjct: 159 MLARRVCPDVSTFNILINVLCVEGKLKKAGYL--LKKMEESGYVPSVVTYNTVLNWYCKK 216
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTM--------------------------------- 246
+ AL +++QM S GI+ D Y M
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276
Query: 247 --VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++NG + + A +F E+ +L L+P+ TYN I+G C N E + ++ ME
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G KP+ ++Y+ LL LC+ + + +++ M+ G+++ Y+ MIDGL G + E
Sbjct: 337 TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNE 396
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
+ LL++ L G+ F I G C+ G ++ E++ +M ++P + ++ L+
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIY 456
Query: 425 SSVSKLDFV 433
+ D V
Sbjct: 457 NYCKTGDVV 465
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 172/404 (42%), Gaps = 55/404 (13%)
Query: 57 IPKQPHI-LSSLLHSFSIYNCEPPPEAYHFVIKT-LAENSQFCDISSVLDHIEKRENFET 114
+ +QP + L L H SI H +++ L EN++ S+L H+ +
Sbjct: 35 VIQQPGLELRHLTHMLSI--------TTHILVRARLYENAK-----SILKHLSQMG--VG 79
Query: 115 PEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSL 174
+ +F L+ TY +L ++ R VG A+E M GF TC++
Sbjct: 80 SKSVFGALMNTYPLCKSNPSVFDLLIRV-YLREGMVGDALETFRLMGIRGFNPSVYTCNM 138
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L + ++R + + L F +EM C + + +I L + K+ A +L +M+
Sbjct: 139 LLGKLVKERKVGAVWL--FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEE 196
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P +V Y VLN + Y A EL D++ G+ D TYN+ ++ LCK N
Sbjct: 197 SGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAK 256
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
G ++ M + P+ ITYN+++ K ++ + +EM ++ N TY+ +ID
Sbjct: 257 GYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALID 316
Query: 355 GLASKGDIIEACGLLE--------------EALNKGLCTQSSM----------------- 383
G G+ +A +LE AL GLC +
Sbjct: 317 GHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIV 376
Query: 384 ----FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ GL+ ++++LL +M V P + L+
Sbjct: 377 GCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLI 420
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 134/309 (43%), Gaps = 33/309 (10%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE---------------QRDLSSDELL- 191
R A+E+++ M + G D T ++++ +C+ +R +S +E+
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276
Query: 192 -----GFV------------QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
GFV QEM L V Y +I AL IL M++
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G KP+ V Y+ +LNG+ + ++ + + + + G++ Y I+GLC+ +
Sbjct: 337 TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNE 396
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+K++ M + G PDV+T++ L+ C+V ++ ++E++ +M G+ N Y+ +I
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIY 456
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GD++EA + G + + + LC+ G V A M+ P
Sbjct: 457 NYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVP 516
Query: 415 GARVWEALL 423
+ ++ ++
Sbjct: 517 NSITFDCII 525
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 2/255 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ IL M G + + S +L+ +C + ++ M+ G G + YT +
Sbjct: 327 ALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSK--SILERMRMNGMIVGCIAYTAM 384
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + + +++ +L++M DG+ PD+V +++++NG +E+ ++ GL
Sbjct: 385 IDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGL 444
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ Y I CK +V K+ M +G + N L+ +LCK ++
Sbjct: 445 APNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEY 504
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
M G V N T+ +I+G + G+ ++A + +E + G + + LC
Sbjct: 505 FFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALC 564
Query: 393 QRGLVRKALELLKQM 407
+ G ++A LL ++
Sbjct: 565 RAGKFKEAKRLLDKL 579
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 2/248 (0%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDI 241
R S L F ++M+K G C ++ ++ + K+ A I M S I P +
Sbjct: 671 RAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSL 730
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y ++L+G +++ K L++ ++ G+ PD T + I G CK ++ G+K++
Sbjct: 731 ATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKK 790
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M G D T+N L+ C+ E+ + +LV M I ++ T+ +I L+
Sbjct: 791 MLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVST 850
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ E+ LL E L +G + + +C+ G + A +L +M +S G V E+
Sbjct: 851 VQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSG-DVAES 909
Query: 422 LLLSSVSK 429
L+ ++K
Sbjct: 910 ALVRGLAK 917
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 11/267 (4%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF--- 202
R+ ++ EI+ M G + + ++ + C+ D+ E M ++G+
Sbjct: 425 RVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVV--EAFKVYVAMSRIGYDAN 482
Query: 203 CFGMVDYTNV-IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
CF NV + SL K KV A + M G P+ + + ++NG + +KA
Sbjct: 483 CF----ICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAF 538
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+FDE++ G P +TY + LC+ + +++ + + S D +TYNT+L
Sbjct: 539 SMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVET 598
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT-Q 380
K L L EM + ++ + TY+I+ GL +G ++ A L KG + +
Sbjct: 599 FKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPE 658
Query: 381 SSMFDETICGLCQRGLVRKALELLKQM 407
M+ + GL + G + AL + M
Sbjct: 659 KVMYTTFVDGLFRAGQSKAALYFCEDM 685
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 115/263 (43%), Gaps = 3/263 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
++++L+ M+ DG D T S++++ C + + + + + +M K G + YT +
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEI--ICKMYKAGLAPNSIIYTTL 454
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K V +A + M G + ++++ + AE F + +G
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGN 514
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VP+ T++ ING N M M + G P TY LL+ALC+ + +
Sbjct: 515 VPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKR 574
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ ++ + ++ TY+ ++ G + +A L +E + + + S + GL
Sbjct: 575 LLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLI 634
Query: 393 QRGLVRKALELLKQMADKD-VSP 414
+RG + AL + K VSP
Sbjct: 635 RRGKMVAALHFYGNLLGKGAVSP 657
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 154/378 (40%), Gaps = 27/378 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
E Y+ ++ L +N++ +L + KR E + +I + + +
Sbjct: 235 EADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRM-ISPNEITYNSIINGFVKEGKIGAAT 293
Query: 137 NLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+F ++ + N V + N +I DG C DG + ++ L +
Sbjct: 294 RIFQEMSMLNLLPNCVTY-----NALI-DGHCHDG----------------NFEQALTIL 331
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ M+ G V Y+ ++ L + K + IL +M+ +G+ + YT +++G+
Sbjct: 332 EMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRN 391
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
++ +L D++L G+VPDV T++V ING C+ ++ ++I M + G P+ I Y
Sbjct: 392 GLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIY 451
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
TL+ CK ++ ++ M G N ++++ L G + A
Sbjct: 452 TTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSK 511
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
G S FD I G G KA + +M P + LL + F
Sbjct: 512 IGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKE 571
Query: 435 TSFIRLVDQILNTPCKME 452
RL+D++ P ++
Sbjct: 572 AK--RLLDKLHYIPSAVD 587
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 4/194 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++ K + DA+ + ++M + PD Y ++ G+I + V A +
Sbjct: 589 VTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGN 648
Query: 267 LLVLGLV-PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
LL G V P+ Y +++GL + +A + ME+ G D+I N +L ++
Sbjct: 649 LLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMG 708
Query: 326 ELNRLRELVKEMKWKGIVL--NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
++ + ++ M W GI + +L TY+I++ G A K ++ + L + G+
Sbjct: 709 KMAKAGDIF-TMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLT 767
Query: 384 FDETICGLCQRGLV 397
I G C+ ++
Sbjct: 768 CHSLILGFCKSAML 781
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 122/260 (46%), Gaps = 8/260 (3%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ VG A +++N M D T I+S + + LL + EM + G
Sbjct: 814 DEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLL--LHEMLERGCIPDRR 871
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ + + + A + ++M++ GI V + ++ G+ +A+ + D +
Sbjct: 872 QYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFM 931
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L L+P + T+ ++ C+ ++ +K+ M+ K DVI YN L+ LC ++
Sbjct: 932 LRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDV 991
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+L KE+K +G+ N+ TY I+ID + + DI A G E L K L + +
Sbjct: 992 ASALKLYKEIKQRGLWPNMTTYCILIDAIFTN-DISLAKG---EVLLKDL-QERGVISGH 1046
Query: 388 ICGLCQRGLVRKALELLKQM 407
CG ++GL+ A++ LK M
Sbjct: 1047 WCGGIRQGLI-IAMDRLKSM 1065
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%)
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
DG+ D + M++ ++ KA +L + + + + PD+ T++ I+ L + + V+
Sbjct: 794 DGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQE 853
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ M E G PD Y L+ +C++ ++ +L EM+ GI S ++
Sbjct: 854 SHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVR 913
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GLA G + EA +L+ L K L + F + C+ + +AL+L M DV
Sbjct: 914 GLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKL 973
Query: 415 GARVWEALL 423
+ L+
Sbjct: 974 DVIAYNVLI 982
>gi|224098475|ref|XP_002334555.1| predicted protein [Populus trichocarpa]
gi|222873072|gb|EEF10203.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
+V +A + + M + G KPD+ CY +++NG KA++L++E+++ GL PD TYN
Sbjct: 9 EVVEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYN 68
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
I+GLC+ + + M + G+ PD+ Y+ LL LCK L + L + M+
Sbjct: 69 TLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSS 128
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
+ +L Y+I++D + G++ +A L E KGL ++ I GLC+ GL+ +A
Sbjct: 129 SLKPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEA 188
Query: 401 LELLKQMADKDVSP 414
LE + M + P
Sbjct: 189 LEAFRNMEEDGCPP 202
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 2/213 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K ++ A + N+M G+ PD V Y +++G+ +A++LF +
Sbjct: 32 YNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQLGRLREAQDLFKNMH 91
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G +PD++ Y++ ++GLCKQ + ++ M+ KPD++ YN L+ A+CK L
Sbjct: 92 KNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCKSGNLK 151
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
REL E+ KG+ N+Q Y+ +I+GL +G + EA G ++ I
Sbjct: 152 DARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNVII 211
Query: 389 CGLCQRGLVRKALELLKQMADKD--VSPGARVW 419
G Q +A+ L+ +M D+ G W
Sbjct: 212 RGFLQHKDESRAVHLIGEMRDRGFIADVGTTTW 244
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 90/166 (54%)
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
V+A +LFD ++ G PDV+ YN+ ING CK ++ ++ M G PD +TYNTL
Sbjct: 11 VEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTL 70
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LC++ L ++L K M G + +L YSI++DGL +G + +A L + L
Sbjct: 71 IHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSL 130
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
M++ + +C+ G ++ A EL ++ K + P +++ ++
Sbjct: 131 KPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTII 176
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 2/203 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+ A ++ N MI G D T + ++ +C+ L + L + M K G
Sbjct: 41 KATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLCQLGRLREAQDL--FKNMHKNGNLPD 98
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+ ++ L K+ + A + M+S +KPD+V Y ++++ + + A ELF
Sbjct: 99 LFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFS 158
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
EL V GL P+V Y INGLCK+ ++ ++ MEE G PD +YN +++ + +
Sbjct: 159 ELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEFSYNVIIRGFLQHK 218
Query: 326 ELNRLRELVKEMKWKGIVLNLQT 348
+ +R L+ EM+ +G + ++ T
Sbjct: 219 DESRAVHLIGEMRDRGFIADVGT 241
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + MI G+ D +++++ C+ + D+ EM G V Y +
Sbjct: 13 ARKLFDVMITKGYKPDVFCYNILINGYCKATRI--DKAKQLYNEMILQGLTPDKVTYNTL 70
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + ++ +A + M +G PD+ Y+++L+G+ Q KA LF + L
Sbjct: 71 IHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSL 130
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ YN+ ++ +CK N++ ++ + + G +P+V Y T++ LCK L+ E
Sbjct: 131 KPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALE 190
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ M+ G + +Y+++I G D A L+ E ++G
Sbjct: 191 AFRNMEEDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGF 235
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 166/374 (44%), Gaps = 30/374 (8%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRF 132
+ C P Y ++ + + + + +LD ++K + +P ++ L+K D
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS--SPNLQLYSSLVKGLCDGGSV 486
Query: 133 QDSVNLFYKIPKF------------------RINRVGFAIEILNCMINDGFCVDGKTCSL 174
+++++ ++ K + R+ A I M+++G D T ++
Sbjct: 487 ENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNI 546
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+++ +C R+ + + +++ +G+ V YT + L K +V A+ +L + S
Sbjct: 547 LINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASS 606
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G D+V YT + G+ Q +A LF E++ G PD Y INGL K +E
Sbjct: 607 RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLED 666
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG-IVLNLQTYSIMI 353
K M G KP V TY L+QALC ++ + M +G +V ++ Y +I
Sbjct: 667 ACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALI 726
Query: 354 DGLASKGDIIEACGLLEEALNKG----LCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
G + A L E+ +++G T +S+FD GL + G KA ELL++MA
Sbjct: 727 HGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFD----GLVRSGKTEKAQELLQEMAA 782
Query: 410 KDVSPGARVWEALL 423
P A + A+L
Sbjct: 783 GGSPPHAATFTAIL 796
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 165/387 (42%), Gaps = 66/387 (17%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFR--------------INRVGF---AIEILNC 159
F F LI+++A R D+V F + + R + + G A E+ +
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHE 214
Query: 160 MINDGFCVDGKT--CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
M+ GF + +++ + + +R + E+ G +M+K GF + Y +I L
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFG---QMEKCGFPPDAIAYNTMIDGLA 271
Query: 218 KKEKVFDALGILNQM-----------------------------------KSDGIKPDIV 242
K +AL +L+ M + G +P+ V
Sbjct: 272 KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV 331
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
YT +++G +A LFDE++ G PDV T+ V I+GLCK N E K M
Sbjct: 332 IYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G KP+V+TY T++Q L K+ + ++K M G + TY ++DG G +
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Query: 363 IEACGLLEEALNKGLCTQS---SMFDETICGLCQRGLVRKALELL---KQMADKDVSPGA 416
EA LL+E L+K C+ S ++ + GLC G V L+ L + A +++ PG
Sbjct: 452 DEAAQLLDE-LDK--CSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGL 508
Query: 417 RVWEALLLSSVSKLDFVNTSFIRLVDQ 443
+ L +LD F R+V +
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSE 535
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM K G + +IRS + + DA+ MK KPD+ + ++++ +
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKA 202
Query: 255 EDYVKAEELFDELLVLGLV------------------------------------PDVYT 278
KA E+F E++ +G V PD
Sbjct: 203 GMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I+GL K + + +K++ M P +TY L+ +LCK L R EL + M
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG----LCTQSSMFDETICGLCQR 394
G N Y+ +I G A G + EAC L +E + G + T + M D GLC+
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMID----GLCKS 378
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
G +A + ++M P + ++ +SK+ V +F R++ ++ C
Sbjct: 379 GNFEQAAKSFEEMMRGGCKPNVVTYTT-IIQGLSKIGRVANAF-RIMKGMIAHGC 431
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I V A+++L + G+ D + + + +C Q + D + QEM + G
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV--DRAVSLFQEMVRQGGAPD 647
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I L+K +K+ DA ++M G KP + YT ++ + + +A F+
Sbjct: 648 AAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFE 707
Query: 266 ELLVLG-LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+L G LV V Y+ I+G CK V+A +K+ M G+ P +T +L L +
Sbjct: 708 GMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRS 767
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ + +EL++EM G + T++ ++DGL
Sbjct: 768 GKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 36/224 (16%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G + D+ Y ++N ++ +++Y + + +E+L G+ P+ +++N+ I + +
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 296 IKMIACMEELGSKPDVITYNTLLQALC--------------------------------- 322
+ M+ KPD+ T+ L+ LC
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 323 ---KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
K + + RE+ +M+ G + Y+ MIDGLA G EA +L+ L K
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + LC+ G + +A EL + MA P + ++ +L+
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 2/274 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ NR+ A E++ M G + + I+ ++C++ S E GF++ M+ +G
Sbjct: 22 KANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEG--RSAEAYGFIETMRSMGVSPT 79
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I K+EK+ AL IL +M G +P+ V Y L+G+ A LF
Sbjct: 80 IVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFR 139
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ + DVY Y I+GLC+ + ++ ME G P YN +L LCK
Sbjct: 140 AMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGS 199
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N +L K M GI+ + T+ +M+ G I +A LL++ + GL + +++
Sbjct: 200 RINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYN 259
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
I L + G V +A LL++M + +SP +R +
Sbjct: 260 TLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 115/233 (49%), Gaps = 14/233 (6%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ L K ++ DA ++ M G P+ + + +++ + + +A +
Sbjct: 10 VVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIE 69
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ +G+ P + TYN+ I+G CK+ + ++++ M G +P+ +TYNT L LCK
Sbjct: 70 TMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYG 129
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ L + M K I L++ Y+ +IDGL G + EA LL+E N G + ++
Sbjct: 130 KVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYN 189
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP--------------GARVWEALLL 424
+ LC+ + +A +L K+M + P G R+ +ALLL
Sbjct: 190 AILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLL 242
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 137/277 (49%), Gaps = 6/277 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGIL 229
T +++ +C+ L+ + V+ M + G CF + + ++ +L K+ + +A G +
Sbjct: 12 TFGILVDGLCKANRLT--DAFELVEVMGERG-CFPNALVFNGIMDALCKEGRSAEAYGFI 68
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M+S G+ P IV Y ++++G +E +A E+ E+ G P+ TYN +++GLCK
Sbjct: 69 ETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKY 128
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
V+ + + M E + DV Y TL+ LC+ +L L+ EM+ G V Y
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ ++ L I EA L + G+ F + G C+ + AL LL+QM
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248
Query: 410 KDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
++P ++ L+ ++++ V+ ++ RL+ ++++
Sbjct: 249 AGLAPREVIYNT-LIDALNRAGRVSEAY-RLLQEMIS 283
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M G P +V + ++++G+ A EL + + G P+ +N ++ LCK+
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
I M +G P ++TYN L+ CK +L+R E+++EM +G N TY+
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+ GL G + +A L K + + I GLCQ G + +A LL +M +
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 412 VSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
P + A+L L S+++ + F R+
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMT 212
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 2/200 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+EIL M G + T + L +C+ + D+ L + M + + YT +
Sbjct: 99 ALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKV--DDALALFRAMTEKKIRLDVYGYTTL 156
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + K+ +A +L++M++ G P CY +L+ + +A +LF + G+
Sbjct: 157 IDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGI 216
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD T+ + + G C+ + ++ + ++ M+ G P + YNTL+ AL + ++
Sbjct: 217 LPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYR 276
Query: 333 LVKEMKWKGIVLNLQTYSIM 352
L++EM +G+ N +TY++M
Sbjct: 277 LLQEMISRGLSPNSRTYALM 296
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 2/274 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ NR+ A E++ M G + + I+ ++C++ S E G+++ M+ +G
Sbjct: 22 KANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEG--RSAEAYGYIETMRSMGVSPT 79
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I K+EK+ AL IL +M G +P+ V Y L+G+ A LF
Sbjct: 80 IVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFR 139
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ + DVY Y I+GLC+ + ++ ME G P YN +L LCK
Sbjct: 140 AMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGS 199
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N +L K M GI+ + T+ +M+ G I +A LL++ + GL + +++
Sbjct: 200 RINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYN 259
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
I L + G V +A LL++M + +SP +R +
Sbjct: 260 TLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 115/233 (49%), Gaps = 14/233 (6%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ L K ++ DA ++ M G P+ + + +++ + + +A +
Sbjct: 10 VVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIE 69
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ +G+ P + TYN+ I+G CK+ + ++++ M G +P+ +TYNT L LCK
Sbjct: 70 TMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYG 129
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ L + M K I L++ Y+ +IDGL G + EA LL+E N G + ++
Sbjct: 130 KVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYN 189
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP--------------GARVWEALLL 424
+ LC+ + +A +L K+M + P G R+ +ALLL
Sbjct: 190 AILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLL 242
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 137/277 (49%), Gaps = 6/277 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGIL 229
T +++ +C+ L+ + V+ M + G CF + + ++ +L K+ + +A G +
Sbjct: 12 TFGILVDGLCKANRLT--DAFELVEVMAERG-CFPNALVFNGIMDALCKEGRSAEAYGYI 68
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M+S G+ P IV Y ++++G +E +A E+ E+ G P+ TYN +++GLCK
Sbjct: 69 ETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKY 128
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
V+ + + M E + DV Y TL+ LC+ +L L+ EM+ G V Y
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ ++ L I EA L + G+ F + G C+ + AL LL+QM
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248
Query: 410 KDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
++P ++ L+ ++++ V+ ++ RL+ ++++
Sbjct: 249 AGLAPREVIYNT-LIDALNRAGRVSEAY-RLLQEMIS 283
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M G P +V + ++++G+ A EL + + G P+ +N ++ LCK+
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
I M +G P ++TYN L+ CK +L+R E+++EM +G N TY+
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+ GL G + +A L K + + I GLCQ G + +A LL +M +
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 412 VSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
P + A+L L S+++ + F R+
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMT 212
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 101/200 (50%), Gaps = 2/200 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+EIL M G + T + L +C+ + D+ L + M + + YT +
Sbjct: 99 ALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKV--DDALALFRAMTEKKIRLDVYGYTTL 156
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + K+ +A +L++M++ G P CY +L+ + +A +LF + G+
Sbjct: 157 IDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGI 216
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD T+ + + G C+ + ++ + ++ M+ G P + YNTL+ AL + ++
Sbjct: 217 LPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYR 276
Query: 333 LVKEMKWKGIVLNLQTYSIM 352
L++EM +G+ N +TY++M
Sbjct: 277 LLQEMISRGLSPNSRTYALM 296
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 154/338 (45%), Gaps = 40/338 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ L +I GF VD + +L +C + +SD + ++ M +LG +
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR-TSDAMDIVLRRMTQLGCIPNVF 163
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +++ L + + +AL +L M DG PD+V YT V+NG + D KA +
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM----------------------- 302
E+L G++P+V TY+ I LCK ++ ++++ M
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 303 ------------EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
G +PDV+TYN+L+ LCK R++ M +G+ + TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ G A+KG ++E GLL+ + G+ +F IC ++G V +A+ + +M +
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403
Query: 411 DVSPGARVWEAL--LLSSVSKLDFVNTSFIRLVDQILN 446
++P + + +L +++ F +++D+ L+
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 166/372 (44%), Gaps = 24/372 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S + +P Y +++ A ++ +LD + R ++F LI Y
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD-LMVRNGIHPNHYVFSILICAY 384
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
A + ++ +F K+ + +N RV A+ MI++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 170 KTCSLILSSVC--EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ ++ S+C ++ D + + +L EM G C + + ++I S K+ +V ++
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELIL----EMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ + M G+KPDI+ Y+ +++G + +A +L ++ +G+ PD TYN ING C
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + +E + + ME G PD+ITYN +LQ L + R +EL + G L L
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I++ GL EA + + L ++ F+ I L + G +A +L +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680
Query: 408 ADKDVSPGARVW 419
+ + P R +
Sbjct: 681 SANGLVPDVRTY 692
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 4/280 (1%)
Query: 148 NRVGFAIEILNCMINDGF-CV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
NR A+E+L M +DG C D + + +++ ++ DL D+ G EM G
Sbjct: 176 NRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPN 233
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+++I +L K + + A+ +L M +G+ P+ Y +++G +A
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ PDV TYN ++ LCK KM M + G KP++ TY TLLQ
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + L+ M GI N +SI+I A +G + +A + + +GL + +
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I LC+ G V A+ +QM D+ +SPG V+ +L+ S
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L M+ +G + +T + I+ C E +GF+++M G +V Y ++
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG--QPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A + + M G+KP+I Y +L G + V+ L D ++ G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY------------------ 314
P+ Y +++ I KQ V+ + + + M + G PD +TY
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 315 -----------------NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
N+L+ +LC + ++ +EL+ EM +GI L+ ++ +ID
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+G +IE+ L + + G+ + I G C G + +A +LL M + P
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 418 VWEALL 423
+ L+
Sbjct: 551 TYNTLI 556
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E++ M++ G C+D + I+ S C E R + S++L M ++G ++ Y+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL---MVRIGVKPDIITYST 519
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K+ +A +L M S G+KPD V Y ++NG A LF E+ G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD+ TYN+ + GL + A ++ + E G++ ++ TYN +L LCK +
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + + + L +T++IMI L G EA L GL + L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
++GL+ + +L M + + +R+ +++ + + D +++ ++D+
Sbjct: 700 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCF 204
+I+R+ A+ + M + G D T ++IL + + +R ++ EL + E G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES---GTQL 617
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++ L K +AL + + ++ + + +++ ++ +A++LF
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L GLVPDV TY++ L +Q +E + MEE G + N++++ L +
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
++ R + + K L T S+ +D L+
Sbjct: 738 GDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 153/338 (45%), Gaps = 40/338 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ L +I GF VD + +L +C + +SD + ++ M +LG +
Sbjct: 105 GRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKR-TSDAMDIVLRRMTQLGCIPNVF 163
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +++ L + +AL +L M DG PD+V YT V+NG + D KA +
Sbjct: 164 SYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM----------------------- 302
E+L G++P+V TY+ I LCK ++ ++++ M
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 303 ------------EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
G +PDV+TYN+L+ LCK R++ M +G+ + TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ G A+KG ++E GLL+ + G+ +F IC ++G V +A+ + +M +
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403
Query: 411 DVSPGARVWEAL--LLSSVSKLDFVNTSFIRLVDQILN 446
++P + + +L +++ F +++D+ L+
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 167/375 (44%), Gaps = 24/375 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S + +P Y +++ A ++ +LD + R ++F LI Y
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD-LMVRNGIHPNHYVFSILICAY 384
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
A + ++ +F K+ + +N RV A+ MI++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 170 KTCSLILSSVC--EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ ++ S+C ++ D + + +L EM G C + + ++I S K+ +V ++
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELIL----EMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ + M G+KPDI+ Y+ +++G + +A +L ++ +G+ PD TYN ING C
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + +E + + ME G PD+ITYN +LQ L + R +EL + G L L
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I++ GL EA + + L ++ F+ I L + G +A +L +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680
Query: 408 ADKDVSPGARVWEAL 422
+ + P R + +
Sbjct: 681 SANGLVPDVRTYSLM 695
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 4/280 (1%)
Query: 148 NRVGFAIEILNCMINDGF-CV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
NR A+E+L M +DG C D + + +++ ++ DL D+ G EM G
Sbjct: 176 NRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPN 233
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+++I +L K + + A+ +L M +G+ P+ Y +++G +A
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ PDV TYN ++ LCK KM M + G KP++ TY TLLQ
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + L+ M GI N +SI+I A +G + +A + + +GL + +
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I LC+ G V A+ +QM D+ +SPG V+ +L+ S
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 177/415 (42%), Gaps = 46/415 (11%)
Query: 2 VRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQP 61
+ + +A L K R+ L+P + + V+ ++ +++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
+ +SL+HS I+ + +A +++ L D LD I F
Sbjct: 445 IVYNSLIHSLCIF--DKWDKAKELILEML-------DRGICLDTI-----------FFNS 484
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILN-CMINDGFCVDGKTCSLILSSVC 180
+I ++ R +S LF + R+G +I+ + DG+C+ GK
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMV-----RIGVKPDIITYSTLIDGYCLAGKM--------- 530
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
DE + M +G V Y +I K ++ DAL + +M+S G+ PD
Sbjct: 531 -------DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
I+ Y ++L G+ A+EL+ + G ++ TYN+ ++GLCK N + ++M
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQ 643
Query: 301 --CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
C+ +L + + T+N ++ AL KV + ++L + G+V +++TYS+M + L
Sbjct: 644 NLCLTDL--QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+G + E L G S M + + L QRG + +A L + +K S
Sbjct: 702 QGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L M+ +G + +T + I+ C E +GF+++M G +V Y ++
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG--QPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A + + M G+KP+I Y +L G + V+ L D ++ G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY------------------ 314
P+ Y +++ I KQ V+ + + + M + G PD +TY
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 315 -----------------NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
N+L+ +LC + ++ +EL+ EM +GI L+ ++ +ID
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+G +IE+ L + + G+ + I G C G + +A +LL M + P
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 418 VWEALL 423
+ L+
Sbjct: 551 TYNTLI 556
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E++ M++ G C+D + I+ S C E R + S++L M ++G ++ Y+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL---MVRIGVKPDIITYST 519
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K+ +A +L M S G+KPD V Y ++NG A LF E+ G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD+ TYN+ + GL + A ++ + E G++ ++ TYN +L LCK +
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + + + L +T++IMI L G EA L GL + L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
++GL+ + +L M + + +R+ +++ + + D +++ ++D+
Sbjct: 700 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCF 204
+I+R+ A+ + M + G D T ++IL + + +R ++ EL + E G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES---GTQL 617
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++ L K +AL + + ++ + + +++ ++ +A++LF
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L GLVPDV TY++ L +Q +E + MEE G + N++++ L +
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
++ R + + K L T S+ +D L+
Sbjct: 738 GDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 172/404 (42%), Gaps = 59/404 (14%)
Query: 41 NVKQSLTTPPTKQQQQIPKQ--PHILSSLLHSFSIY-NCEPPPEAYHFVIKTLAENSQFC 97
+VK S P++ Q+ I Q P + + S+ N + ++H +I L QF
Sbjct: 5 HVKPSPIGSPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFS 64
Query: 98 DISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRI---------- 147
+ +L + K E + +F D+I+ Y +A+ ++ F+ + +F
Sbjct: 65 LMQDLLMRL-KSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXL 123
Query: 148 --------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
N + A ++ G D K+ ++++S+ C DLS
Sbjct: 124 LQLLVSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLS------------- 170
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
+ YT + NQM + PD+ Y +++ G+ + +
Sbjct: 171 -------IAYT-----------------LFNQMFKRDVAPDVESYRILMQGLCRKSQVNR 206
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +L +++L G VPD +Y +N LC++ ++ K++ M+ G PD++ YNT++
Sbjct: 207 AVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTVIL 266
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
C+ +++++M G NL +Y ++ GL +G EA +EE L+KG
Sbjct: 267 GFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSP 326
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
S+F I G C G + +A E+L +M + W A++
Sbjct: 327 HFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAII 370
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 11/228 (4%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + N IR A + G+ PD Y ++++ D A LF+
Sbjct: 127 LVSHRNYIRP---------AFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFN 177
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + PDV +Y + + GLC+++ V + ++ M G PD ++Y TLL +LC+ +
Sbjct: 178 QMFKRDVAPDVESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKK 237
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L +L+ MK KG ++ Y+ +I G +G ++AC +LE+ + G +
Sbjct: 238 KLKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYG 297
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ GLC +GL +A +++M K SP V+ AL+ +V KL+
Sbjct: 298 TLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLE 345
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR-E 332
P +++ + I G + N + +K M + SKP N LLQ L R R +
Sbjct: 82 PSLFSDIIEIYG--EANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSHRNYIRPAFD 139
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K G+ + ++Y+I++ GD+ A L + + + + + GLC
Sbjct: 140 LFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLC 199
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++ V +A++LL+ M +K P A + LL S
Sbjct: 200 RKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNS 232
>gi|357493977|ref|XP_003617277.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518612|gb|AET00236.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 502
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 181/440 (41%), Gaps = 82/440 (18%)
Query: 46 LTTPPTKQQQQIPK---QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAEN--SQFCDIS 100
L +PP++ Q I P I+++L+H + + PEA +++ + ++ S+ I
Sbjct: 4 LPSPPSQLIQTIASTSPNPSIIATLIHF--LVQSKKLPEAQSLLLRIIRKSGVSRAKVID 61
Query: 101 SVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCM 160
S++ N +F LI+TY A + ++ F + K
Sbjct: 62 SLISSSSSNLNSNQNVVVFDLLIRTYVQARKLREGFEAFQLLRK---------------- 105
Query: 161 INDGFCVDGKTCSLILSSVCEQR-DLSSDELLGF-------------------------- 193
GFCV C+ +L S+ + R LS E G
Sbjct: 106 --RGFCVSINACNALLGSIVKVRVYLSEMEAKGLKPGLFTYNALINGLCKEGGYESAKCV 163
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ +M +GFC + V+ +KE V++A + N+M G+ PD++ ++ ++
Sbjct: 164 LDKMLGVGFCPDAATFNPVLVESFRKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSR 223
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ +A F+++ +GLVPD Y + ING C+ N+V +K+ M E DV+T
Sbjct: 224 NGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVT 283
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE--- 370
YNTLL LC+ + L+ EL KEM +G+ + T + +I G G++ +A L E
Sbjct: 284 YNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETIT 343
Query: 371 ---------------------------EALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
L G C+ + + I G + G V KA +
Sbjct: 344 LRSEMEKAKELWRDMISREIFPHYISFSILINGFCSLGLVSESLIKGYLRAGNVSKANDF 403
Query: 404 LKQMADKDVSPGARVWEALL 423
L M + V P + L+
Sbjct: 404 LNTMVSEGVPPDCITYNTLI 423
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 52/336 (15%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L+ M+ GFC D T + +L + D+ E + EM + G ++ ++++I
Sbjct: 163 VLDKMLGVGFCPDAATFNPVLVESFRKEDVWEAERV--FNEMLQCGVVPDLISFSSIIGV 220
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ ++ AL +MK G+ PD V YT+++NG D A ++ +E++ V D
Sbjct: 221 FSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMD 280
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK------------ 323
V TYN +NGLC+ ++ ++ M E G PD T TL+ CK
Sbjct: 281 VVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE 340
Query: 324 ----VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
E+ + +EL ++M + I + ++SI+I+G S G + E+ L++ L G +
Sbjct: 341 TITLRSEMEKAKELWRDMISREIFPHYISFSILINGFCSLGLVSES--LIKGYLRAGNVS 398
Query: 380 QSSMFDETIC------------------------------GLCQRGLVRKALELLKQMAD 409
+++ F T+ G + G +++A +L +M D
Sbjct: 399 KANDFLNTMVSEGVPPDCITYNTLINRLLPDLVTYNAILGGFSRHGRMQEAEMVLHKMID 458
Query: 410 KDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
K ++P + +++ VSK D + +F R+ D++L
Sbjct: 459 KGINPDKSTYTSVINGYVSK-DNMKEAF-RVHDEML 492
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 130/317 (41%), Gaps = 46/317 (14%)
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ FR V A + N M+ G D + S I+ +L L + ++MK +G
Sbjct: 184 VESFRKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELG--RALAYFEKMKGVG 241
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
V YT +I + V AL + N+M D+V Y +LNG+ + A+
Sbjct: 242 LVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDAD 301
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-------------EELGSK 308
ELF E++ G+ PD YT I+G CK N+ + + + ++ S+
Sbjct: 302 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISR 361
Query: 309 ---PDVITYNTLLQALC--------------KVRELNRLRELVKEMKWKGI--------- 342
P I+++ L+ C + +++ + + M +G+
Sbjct: 362 EIFPHYISFSILINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNT 421
Query: 343 -----VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ +L TY+ ++ G + G + EA +L + ++KG+ S + I G + +
Sbjct: 422 LINRLLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNM 481
Query: 398 RKALELLKQMADKDVSP 414
++A + +M + P
Sbjct: 482 KEAFRVHDEMLQRGFVP 498
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ + ++ +A +L++M GI PD YT V+NG + +++ +A + D
Sbjct: 430 LVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEAFRVHD 489
Query: 266 ELLVLGLVPD 275
E+L G VPD
Sbjct: 490 EMLQRGFVPD 499
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 123/242 (50%), Gaps = 1/242 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y +I EKV AL I+ MK +G P++ Y+ ++NG + +A+E+FDE
Sbjct: 273 LTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDE 332
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ LGL PD Y IN C+ V+ ++++ M E + D +T+N +L LC+
Sbjct: 333 MKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGR 392
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
R +++ + ++G+ LN +Y I+++ L +G++ +A L+ L +G+ + +E
Sbjct: 393 FEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNE 452
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ LC+ G V A+ L + + P W ALL+ + + + +F L D ++
Sbjct: 453 LLVHLCEAGKVGDAVMALLGLLELGFKPEPNSW-ALLVELICRERKLLPAFELLDDLVIQ 511
Query: 447 TP 448
P
Sbjct: 512 EP 513
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 9/255 (3%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+LI QR L E+ V E + GF Y ++ L K +K +L+QM
Sbjct: 65 NLIKRETDPQRAL---EIFNRVAEQR--GFSHNNATYATILHKLAKSKKFQAIDAVLHQM 119
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLGLVPDVYTYNVYINGLCKQNN 291
+ K + ++ + + E+FD + ++ P + + +N L + N
Sbjct: 120 TYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQ 179
Query: 292 VEAGIK-MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL-NLQTY 349
V+ K ++ + L +P+ +N L++ CK +++ E+V+EMK + NL TY
Sbjct: 180 VDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITY 239
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKG-LCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
S +I+GL G + EA L EE ++K + + ++ I G C V +AL++++ M
Sbjct: 240 STLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMK 299
Query: 409 DKDVSPGARVWEALL 423
+P + AL+
Sbjct: 300 KNGCNPNVFNYSALM 314
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 168/365 (46%), Gaps = 47/365 (12%)
Query: 118 IFIDLIKTYA---DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSL 174
+ ++L++ Y + +N +I KFR +E+ + ++N G D ++
Sbjct: 176 LVVNLMRDYGLLPEVRTLSALLNALARIRKFRQ-----VLELFDTLVNAGVKPDCYIYTV 230
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ +CE +D + + + + + + G +V Y I L K ++V++A+ + +
Sbjct: 231 VVKCLCELKDFNKAKEI--INQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGE 288
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+K D+V Y ++ G+ +++ E+ DE++ LG VP + I GL K ++E
Sbjct: 289 KGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEG 348
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+++ + +LG P++ YN+++ +LCK +L L M +G+ N TY+I+ID
Sbjct: 349 AFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILID 408
Query: 355 GLASKGDIIEA---------CG--------------------------LLEEALNKGLCT 379
G + + A CG L +E ++KGL
Sbjct: 409 GFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKP 468
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSF 437
+ + I G C+ GLV KA +L +M K ++P + AL+ L ++K+ + F
Sbjct: 469 TVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLF 528
Query: 438 IRLVD 442
+V+
Sbjct: 529 DEMVE 533
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 4/276 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+E+ + G D T C+L+L +C ++ + + EM +LG+
Sbjct: 275 RVWEAVEVKRSLGEKGLKADLVTYCTLVLG-LCRIQEFEVG--MEMMDEMIELGYVPSEA 331
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +I L+K + A +LN++ G+ P++ Y ++N + +AE LF +
Sbjct: 332 AVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVM 391
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GL P+ TY + I+G ++ ++ M E G V +YN+++ CK ++
Sbjct: 392 AERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKM 451
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
L KEM KG+ + TY+ +I G G + +A L E KG+ + F
Sbjct: 452 KMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTAL 511
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
ICGLCQ + +A +L +M + + P + L+
Sbjct: 512 ICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLI 547
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 127/265 (47%), Gaps = 4/265 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G +D + ++++S Q D ELL +EM G V YT +I +K
Sbjct: 636 MVGRGLQMDLVSYAVLISGALNQNDRILFELL---REMHGKGMQPDNVIYTILIDGFIKS 692
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ A M +G P+ V YT ++NG+ +A+ LF +LV +P+ TY
Sbjct: 693 GNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITY 752
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+++ L K+ N+E +++ M + GS + +TYN L++ C++ + +L+ M
Sbjct: 753 GCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIG 811
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+V + TYS I +G++ A + E L +GL +F+ I C G + +
Sbjct: 812 IGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDR 871
Query: 400 ALELLKQMADKDVSPGARVWEALLL 424
AL+L M + + P + +L++
Sbjct: 872 ALQLRNDMMLRGLKPTQSTYHSLMV 896
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 119/256 (46%), Gaps = 3/256 (1%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F + KK F + +I+ V+ ++V D + ++N M+ G+ P++ + +LN +
Sbjct: 143 FFESYKKYKFS-SSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALA 201
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ + ELFD L+ G+ PD Y Y V + LC+ + ++I E G ++
Sbjct: 202 RIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIV 261
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYN + LCK + + E+ + + KG+ +L TY ++ GL + +++E
Sbjct: 262 TYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEM 321
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKL 430
+ G + I GL + G + A ELL ++ V P V+ +++ L KL
Sbjct: 322 IELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKL 381
Query: 431 DFVNTSFIRLVDQILN 446
+ F + ++ LN
Sbjct: 382 EEAELLFSVMAERGLN 397
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ +M + G + Y ++I K K+ A + +M G+KP + YT +++G
Sbjct: 422 YFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYC 481
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
KA +L+ E+ G+ P+ T+ I GLC+ N + K+ M EL P+ +
Sbjct: 482 KDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEV 541
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYN L++ C+ R EL+ EM KG+ + TY +I GL S G + EA + +
Sbjct: 542 TYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDL 601
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+K + + G C+ G +++AL ++M + + + L+ ++++ D
Sbjct: 602 HHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDR 661
Query: 433 VNTSFIR 439
+ +R
Sbjct: 662 ILFELLR 668
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E MI +G+ + T + +++ + + ++ +LL + M + Y
Sbjct: 698 AFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLL--FKRMLVGEAIPNHITYGCF 755
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K+ + +AL + N M G + V Y +++ G + +A +L D ++ +G+
Sbjct: 756 LDHLTKEGNMENALQLHNAM-LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGM 814
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VPD TY+ +I CK+ NV+A + M CM + G KPD + +N L+ A C EL+R +
Sbjct: 815 VPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQ 874
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
L +M +G+ TY ++ LA + + +
Sbjct: 875 LRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQ 906
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 117/214 (54%), Gaps = 1/214 (0%)
Query: 211 NVIRSLVKK-EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
NV+ ++K+ +V A + N + + PD+ YT+++ + + +A LF+E+
Sbjct: 279 NVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRC 338
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ PD TY+ I+GLCK + +++ M G DVITY + L ALCK ++++
Sbjct: 339 KGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDK 398
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
LVK++K +GI N+ TY+I+IDGL +G A + ++ L KG ++ I
Sbjct: 399 AVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMIN 458
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC GL +A+ LL++M D +P +E ++
Sbjct: 459 GLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETII 492
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 155/311 (49%), Gaps = 26/311 (8%)
Query: 134 DSVNLFYKIPKFRIN-RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG 192
D++ L I +N +V A+ + +I GF ++ + ++++ +C+ E
Sbjct: 117 DTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKM-----GETRA 171
Query: 193 FVQEMKKLG---FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+Q ++K+ +V Y+ +I SL K++ V +A + +QM + PD+V ++ ++
Sbjct: 172 ALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIY 231
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE----- 304
G + + +A LF E+++ + PDV T+N+ ++ LCK+ + + ++A M +
Sbjct: 232 GFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQV 291
Query: 305 ---------LGSK---PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+G + PDV +Y +++ LCK++ ++ L EM+ KGI + TYS +
Sbjct: 292 NKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSL 351
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDGL I A LL++ +G + + LC+ V KA+ L+K++ D+ +
Sbjct: 352 IDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGI 411
Query: 413 SPGARVWEALL 423
P + L+
Sbjct: 412 QPNINTYNILI 422
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 140/282 (49%), Gaps = 12/282 (4%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKREN-FETPEFIF--IDL 122
L H + N P ++ ++ L + + +VL + K N + +F I
Sbjct: 244 GLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGK 303
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
+ D H + + KI V A+ + N M G D T S ++ +C+
Sbjct: 304 RRVTPDVHSYTIIIKRLCKIK-----MVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKS 358
Query: 183 RDLSSD-ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+S ELL +M G ++ YT+ + +L K +V A+ ++ ++K GI+P+I
Sbjct: 359 ERISHAWELL---DQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNI 415
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y ++++G+ + + A+ +F +LL+ G V+TYN+ INGLC + + + ++
Sbjct: 416 NTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEK 475
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
ME+ G PDV+TY T+++AL K E ++ +L++EM +G++
Sbjct: 476 MEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLL 517
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+N+V A + N + D + ++I+ +C+ + + DE L EM+ G
Sbjct: 288 VNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMV--DEALSLFNEMRCKGITPDK 345
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+++I L K E++ A +L+QM + G D++ YT L+ + KA L +
Sbjct: 346 VTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKK 405
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ P++ TYN+ I+GLCK+ E + + G K V TYN ++ LC
Sbjct: 406 IKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGL 465
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ L+++M+ G ++ TY +I L + +A LL E + +GL
Sbjct: 466 FDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 8/187 (4%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L ++ G PD + T ++ G+ + +A D ++ G + +Y + IN
Sbjct: 102 AFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILIN 161
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
GLCK A ++++ ++ +V+ Y+T++ +LCK + + EL +M K +
Sbjct: 162 GLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSP 221
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEA----LNKGLCTQSSMFDETICGLCQRGLVRKA 400
++ T+S +I G G EA GL E +N +CT + + D LC+ G ++
Sbjct: 222 DVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD----ALCKEGSTKET 277
Query: 401 LELLKQM 407
+L M
Sbjct: 278 KNVLAVM 284
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 2/221 (0%)
Query: 205 GMVDYTNVIRSLVK--KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
++++ ++ SLVK A+ + ++++ + I P IV + V+N + A
Sbjct: 45 SIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFS 104
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ ++L +G PD T I GLC V + + G + + ++Y L+ LC
Sbjct: 105 VLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLC 164
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ E ++++++ K + N+ YS +ID L + + EA L + + K +
Sbjct: 165 KMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVV 224
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F I G C G ++A L +M +++P + L+
Sbjct: 225 TFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILV 265
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
++V A+ ++ + + G + T ++++ +C++ + +++ Q++ G+ +
Sbjct: 394 HQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVI--FQDLLIKGYKVTVW 451
Query: 208 DYTNVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y +I L E +FD A+ +L +M+ +G PD+V Y ++ + ++ KAE+L E
Sbjct: 452 TYNIMINGLCL-EGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLRE 510
Query: 267 LLVLGLVPD 275
++ GL+ +
Sbjct: 511 MIARGLLEE 519
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 154/338 (45%), Gaps = 40/338 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ L +I GF VD + +L +C + +SD + ++ M +LG +
Sbjct: 105 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR-TSDAMDIVLRRMTQLGCIPNVF 163
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +++ L + + +AL +L M DG PD+V YT V+NG + D KA +
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM----------------------- 302
E+L G++P+V TY+ I LCK ++ ++++ M
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 303 ------------EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
G +PDV+TYN+L+ LCK R++ M +G+ + TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++ G A+KG ++E GLL+ + G+ +F IC ++G V +A+ + +M +
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403
Query: 411 DVSPGARVWEAL--LLSSVSKLDFVNTSFIRLVDQILN 446
++P + + +L +++ F +++D+ L+
Sbjct: 404 GLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 167/375 (44%), Gaps = 24/375 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S + +P Y +++ A ++ +LD + R ++F LI Y
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD-LMVRNGIHPNHYVFSILICAY 384
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
A + ++ +F K+ + +N RV A+ MI++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 170 KTCSLILSSVC--EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ ++ S+C ++ D + + +L EM G C + + ++I S K+ +V ++
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELIL----EMLDRGICLDTIFFNSIIDSHCKEGRVIESEK 500
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ + M G+KPDI+ Y+ +++G + +A +L ++ +G+ PD TYN ING C
Sbjct: 501 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + +E + + ME G PD+ITYN +LQ L + R +EL + G L L
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I++ GL EA + + L ++ F+ I L + G +A +L +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680
Query: 408 ADKDVSPGARVWEAL 422
+ + P R + +
Sbjct: 681 SANGLVPDVRTYSLM 695
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 4/280 (1%)
Query: 148 NRVGFAIEILNCMINDGF-CV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
NR A+E+L M +DG C D + + +++ ++ DL D+ G EM G
Sbjct: 176 NRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL--DKAYGTYHEMLDRGILPN 233
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y+++I +L K + + A+ +L M +G+ P+ Y +++G +A
Sbjct: 234 VVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ PDV TYN ++ LCK KM M + G KP++ TY TLLQ
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + L+ M GI N +SI+I A +G + +A + + +GL + +
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I LC+ G V A+ +QM D+ +SPG V+ +L+ S
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 177/415 (42%), Gaps = 46/415 (11%)
Query: 2 VRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQP 61
+ + +A L K R+ L+P + + V+ ++ +++
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
+ +SL+HS I+ + +A +++ L D LD I F
Sbjct: 445 IVYNSLIHSLCIF--DKWDKAKELILEML-------DRGICLDTI-----------FFNS 484
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILN-CMINDGFCVDGKTCSLILSSVC 180
+I ++ R +S LF + R+G +I+ + DG+C+ GK
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMV-----RIGVKPDIITYSTLIDGYCLAGKM--------- 530
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
DE + M +G V Y +I K ++ DAL + +M+S G+ PD
Sbjct: 531 -------DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPD 583
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
I+ Y ++L G+ A+EL+ + G ++ TYN+ ++GLCK N + ++M
Sbjct: 584 IITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQ 643
Query: 301 --CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
C+ +L + + T+N ++ AL KV + ++L + G+V +++TYS+M + L
Sbjct: 644 NLCLTDL--QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIE 701
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+G + E L G S M + + L QRG + +A L + +K S
Sbjct: 702 QGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFS 756
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L M+ +G + +T + I+ C E +GF+++M G +V Y ++
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG--QPKEAIGFLKKMHSDGVEPDVVTYNSL 310
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A + + M G+KP+I Y +L G + V+ L D ++ G+
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY------------------ 314
P+ Y +++ I KQ V+ + + + M + G PD +TY
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430
Query: 315 -----------------NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
N+L+ +LC + ++ +EL+ EM +GI L+ ++ +ID
Sbjct: 431 YFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+G +IE+ L + + G+ + I G C G + +A +LL M + P
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 418 VWEALL 423
+ L+
Sbjct: 551 TYNTLI 556
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A E++ M++ G C+D + I+ S C E R + S++L M ++G ++ Y+
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL---MVRIGVKPDIITYST 519
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K+ +A +L M S G+KPD V Y ++NG A LF E+ G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD+ TYN+ + GL + A ++ + E G++ ++ TYN +L LCK +
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + + + L +T++IMI L G EA L GL + L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENL 699
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
++GL+ + +L M + + +R+ +++ + + D +++ ++D+
Sbjct: 700 IEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCF 204
+I+R+ A+ + M + G D T ++IL + + +R ++ EL + E G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES---GTQL 617
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++ L K +AL + + ++ + + +++ ++ +A++LF
Sbjct: 618 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 677
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L GLVPDV TY++ L +Q +E + MEE G + N++++ L +
Sbjct: 678 AALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQR 737
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
++ R + + K L T S+ +D L+
Sbjct: 738 GDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI + M+ D +C ++ +C+ + DE M L + Y +
Sbjct: 317 AIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKV--DEAFELASRMLTLDIELSVCIYNAL 374
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + A I++ M+++G +PDIV Y ++LN KAE+L ++ G+
Sbjct: 375 ISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGV 434
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD Y+YN + GLCK + ++ ++ E+G D ++ N L+ A CK +++ E
Sbjct: 435 NPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALE 494
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L KEM +KG+ + TY +I+GL S G A L E+ LN + ++++ + LC
Sbjct: 495 LFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLC 554
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++A + M K+VSP + L+
Sbjct: 555 KVGHFKRAQTIFSHMIQKEVSPDTVTFNTLI 585
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE-MKKLGFCFGMVDYTN 211
A +++ M G D + + +L +C+ L D+ FV + M+ GFC V
Sbjct: 422 AEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQL--DKAFAFVSDHMEVGGFC-DTVSCNI 478
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I + K +KV AL + +M G++ D V Y ++NG+ Y AEELF+++L
Sbjct: 479 LIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQ 538
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+V YN+ ++ LCK + + + + M + PD +T+NTL+ L K
Sbjct: 539 IDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEAL 598
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L K+M+ +G+ + T+ +I GL +G A + E + G+
Sbjct: 599 NLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGI 644
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F+ +K G Y ++ V+ K + ++M G + V Y + ++
Sbjct: 145 FLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLV 204
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ E+ +D L G +TY+ +I+ LC+ N +E +++ M++LG PD+
Sbjct: 205 KNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIW 264
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
N + LCK L ++V++M+ KG ++ TY ++ GL EA GL EE
Sbjct: 265 ACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEM 324
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + L I GLC+ V +A EL +M D+ ++ AL+
Sbjct: 325 VKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALI 375
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
GFC Y+ I +L + ++ +L M G PDI + + + Q A
Sbjct: 223 GFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDA 282
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
++ +++ G PDV TY ++GLC I + M + KPDV + L+
Sbjct: 283 LQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFG 342
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK +++ EL M I L++ Y+ +I G G I +A ++ G
Sbjct: 343 LCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPD 402
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + C G++ KA +L+++M V+P + LL
Sbjct: 403 IVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLL 445
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 116/279 (41%), Gaps = 2/279 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+R + A +I++ M +G D T +++L+ C + E L +++M+ G
Sbjct: 379 WRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKL--IRKMETSGVNP 436
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
Y +++ L K ++ A ++ G D V ++++ + A ELF
Sbjct: 437 DRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELF 496
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ G+ D TY INGL ++ M P+V YN +L LCKV
Sbjct: 497 KEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKV 556
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R + + M K + + T++ +I L + IEA L ++ +G+ + F
Sbjct: 557 GHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTF 616
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GL G A E+ + M + + V E L+
Sbjct: 617 KYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLI 655
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 3/196 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GFC D +C++++ + C+ + + S L +EM G V Y +I L
Sbjct: 469 GFC-DTVSCNILIDAFCKTKKVKS--ALELFKEMGYKGMQADAVTYGTLINGLFSVGYYN 525
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A + QM + I P++ Y ++L+ + + +A+ +F ++ + PD T+N I
Sbjct: 526 LAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLI 585
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
L K++ + + M G +PD +T+ L+ L + E+ + M GI+
Sbjct: 586 YWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGII 645
Query: 344 LNLQTYSIMIDGLASK 359
L+ + +I L SK
Sbjct: 646 LDREVSERLISVLKSK 661
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 114/218 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ K G +V + ++ +K + + + N M++ G++PD+ Y++++NG+ +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A ELFDE+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNT
Sbjct: 222 MEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK +L + ++L EM KG+ + TY+ +IDG +G + A + + +
Sbjct: 282 LIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKEN 341
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ + I GLCQ G A ++L++M + P
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 121/232 (52%)
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
GF +E + G+ + + ++ S VK+ ++ A + + + G++P +V + ++NG
Sbjct: 122 GFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
I D + L + + G+ PDVYTY+V INGLCK++ +E ++ M G P+
Sbjct: 182 IKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNG 241
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL KGD+ +A L +E
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDE 301
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KGL + I G C+ G + A E K+M +++ + AL+
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALI 353
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M ++G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ + M G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI L+K + G + G + + ++++ + + + A+ +FD + G
Sbjct: 107 VIEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V ++N +NG K +++ G ++ M+ G +PDV TY+ L+ LCK ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDAN 226
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM G+V N T++ +IDG G + A + ++ L++ L ++ I GL
Sbjct: 227 ELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
C++G +++A +L +M+ K + P + L+ S
Sbjct: 287 CKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGS 321
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDY 209
GF ++ N M G D T S++++ +C++ + ++EL EM G V +
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKMEDANELF---DEMLNNGLVPNGVTF 244
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+N+G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A + ++M G+KPD + YT +++G + A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G V ++ T
Sbjct: 403 LLKEMQRDGYVPSVVT 418
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 114/218 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ K G +V + ++ +K + + + N M++ G++PD+ Y++++NG+ +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A ELFDE+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNT
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK +L + ++L EM KG+ + TY+ +IDG +G + A + + +
Sbjct: 282 LIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKEN 341
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ + I GLCQ G A ++L++M + P
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ + M G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M +P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAP 414
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + G +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ L+ L M+ G+ ++ TYS++I+GL + + +A L +E L+ GL
Sbjct: 183 KLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A + ++M G+KPD + YT +++G + A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G ++ T
Sbjct: 403 LLKEMQRDGYAPSVVT 418
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 115/218 (52%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++ ++ +L K+ V +AL + +M ++PDIV Y+ +++GV + ++ L +
Sbjct: 314 VVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLN 373
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L + PDV T++++++ CK+ V +I M E G +P+V+TYN+L+ C
Sbjct: 374 EMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHS 433
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ R++ M KG ++ +Y+I+I G I EA L +E +KGL S
Sbjct: 434 QMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHT 493
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLCQ G A EL K+M P + LL
Sbjct: 494 TLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLL 531
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 143/276 (51%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A+E L+ +++ G+ T ++I++ +C+ S+ + ++++M +L +V
Sbjct: 188 GRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAA--IVWMKKMVELDCEPEVV 245
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +I SL K V +A+ + M+S GI P +V Y ++ G+ + +A LF E+
Sbjct: 246 SYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEM 305
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L + PDV T+++ ++ LCK+ V + + M ++ +PD++TY++L+ +CK
Sbjct: 306 LEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLW 365
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
L+ EM + I ++ T+SI +D KG + EA ++ + +GL ++
Sbjct: 366 KESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSL 425
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C + +A ++ M +K +P + L+
Sbjct: 426 MDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILI 461
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 117/236 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ ++M+ G + T +I L V +L ++ G KP I+ + +
Sbjct: 121 DSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTL 180
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ ++ V+A E D ++ G P VYT+ + +NGLCK A I + M EL
Sbjct: 181 INGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDC 240
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+V++Y+ ++ +LCK R +N +L M+ GI + TY+ +I G+ + G +A
Sbjct: 241 EPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASI 300
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E L + F + LC+ G+V +AL + +M + P + +L+
Sbjct: 301 LFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLI 356
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 166/352 (47%), Gaps = 27/352 (7%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
+CEP +Y +I +L +N + + H+ R +P + + LI ++ +++
Sbjct: 239 DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHM--RSIGISPTVVTYNSLIYGMCNSGQWK 296
Query: 134 DSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
+ LF ++ ++ + + V F+I + D C +G ++L E L
Sbjct: 297 QASILFKEMLEWNMKPDVVTFSILV------DALCKEG----VVL------------EAL 334
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+M ++ +V Y+++I + K ++ +LN+M S I+PD+V +++ ++
Sbjct: 335 SVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVF 394
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ +A+ + + ++ GL P+V TYN ++G C + ++ K+ M G PDV
Sbjct: 395 CKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDV 454
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
++YN L++ CK ++ ++L EM KG+ N T++ +I GL G A L ++
Sbjct: 455 LSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKK 514
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + + G C+ G + +AL L + + + P + + LL
Sbjct: 515 MGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILL 566
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 2/210 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+LN M++ D T S+ + C++ +S E + M + G +V Y +++
Sbjct: 371 LLNEMLSRNIRPDVVTFSIWVDVFCKKGMVS--EAQSIINLMIERGLRPNVVTYNSLMDG 428
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
++ +A + + M + G PD++ Y +++ G E +A++LFDE+ GL P+
Sbjct: 429 YCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN 488
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+ I+GLC+ A ++ M G PD+ITY+TLL CK L+ L +
Sbjct: 489 SITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFE 548
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+K + N I++ G+ G + +A
Sbjct: 549 ALKKSQLKPNHVICKILLGGMCKAGKLEDA 578
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL NQM P I + +L ++ + Y ++ ++ G+ VYT + I
Sbjct: 87 DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N LC + V G ++ + +LG KP +IT+NTL+ LC + E + + +G
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ 206
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ T++++++GL G A +++ + + + I LC+ LV +A++L
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266
Query: 404 LKQMADKDVSPGARVWEALL 423
M +SP + +L+
Sbjct: 267 FYHMRSIGISPTVVTYNSLI 286
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A I+N MI G + T + ++ C + DE M G ++ Y +
Sbjct: 403 AQSIINLMIERGLRPNVVTYNSLMDGYCLHSQM--DEARKVFDIMVNKGCAPDVLSYNIL 460
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ K E++ +A + ++M G+ P+ + +T +++G+ A+ELF ++ G
Sbjct: 461 IKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGC 520
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ TY+ ++G CK +++ + + +++ KP+ + LL +CK +L +E
Sbjct: 521 PPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580
Query: 333 LVKEM 337
L +
Sbjct: 581 LFSSL 585
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + M+N G D + ++++ C+ + DE EM G + +T +
Sbjct: 438 ARKVFDIMVNKGCAPDVLSYNILIKGYCKSERI--DEAKQLFDEMSHKGLTPNSITHTTL 495
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + + + A + +M S G PD++ Y+ +L+G +A LF+ L L
Sbjct: 496 ISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQL 555
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
P+ + + G+CK +E ++ + + +PDV
Sbjct: 556 KPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 175/393 (44%), Gaps = 37/393 (9%)
Query: 58 PKQPHILSSLLHSFS-IYNCEPPPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFET 114
P + H + L SF+ + PPP + F ++ + + S+ + + T
Sbjct: 30 PPKFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKG--IT 87
Query: 115 PEFIFID-LIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKT 171
P + LI Y + +L I K F+ N V F N +IN GFC++G
Sbjct: 88 PSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTF-----NTLIN-GFCINGMV 141
Query: 172 CSL---------------------ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
+++ +C ++ + + L +Q+M++ ++ Y+
Sbjct: 142 SKAMAFRLDLMAKGYPLDEFSYGSLINGLC--KNGQTRDALQLLQKMEEDLVRPNLITYS 199
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
VI L K + DAL + + + S GI D+V Y +++G + +A L ++
Sbjct: 200 TVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRG 259
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
+ PD YT+N+ ++ LCK+ + + A M + G KPD++TYN L++ C ++
Sbjct: 260 NINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEA 319
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
REL M +G+ ++ Y+++I+G + EA L +E K L + ++ I G
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDG 379
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G + EL+ +M D+ SP + L
Sbjct: 380 LCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFL 412
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 36/252 (14%)
Query: 208 DYTN--VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
DYT ++ +L K+ ++ +A G+ M G KPDIV Y ++ G + + +A ELF+
Sbjct: 265 DYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFN 324
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ GL PDV YNV ING CK + V+ + + + P++ TYN+L+ LCK+
Sbjct: 325 RMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLG 384
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG-----------------------DI 362
++ ++ELV EM +G ++ TY+I +D D+
Sbjct: 385 RMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDV 444
Query: 363 I-------EACGLLEEALNK----GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
I E + EEAL G C + I LC+ +A+ LL +M D D
Sbjct: 445 IVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDND 504
Query: 412 VSPGARVWEALL 423
P A +E ++
Sbjct: 505 CPPDAVTFETII 516
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 36/292 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +L M+ D T ++++ ++C++ + E G M K G +V Y +
Sbjct: 249 ATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV--EAQGVFAVMMKRGEKPDIVTYNAL 306
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ V +A + N+M G++PD++ Y +++NG + +A LF E+ L
Sbjct: 307 MEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNL 366
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR------- 325
VP++ TYN I+GLCK + +++ M + G PD++TYN L A CK +
Sbjct: 367 VPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAIS 426
Query: 326 ---------------------------ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+L E ++ + G N++TY+IMI+ L
Sbjct: 427 LFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCK 486
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
EA LL + + + F+ I L +R KA +L +M ++
Sbjct: 487 DCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIER 538
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N V A E+ N M+ G D +++++ C+ + DE + +E++ +
Sbjct: 314 NNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMV--DEAMVLFKEIRCKNLVPNLA 371
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++I L K ++ ++++M G PDIV Y + L+ + Y KA LF ++
Sbjct: 372 TYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI 431
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
V G+ PD Y Y+V + CK ++ + + + G P+V TY ++ ALCK
Sbjct: 432 -VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSF 490
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ L+ +M + T+ +I L + + +A L E + +GL
Sbjct: 491 DEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
V EM G +V Y + + K + A+ + Q+ GI PD Y +++
Sbjct: 392 LVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFC 450
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
E AEE LL+ G P+V TY + IN LCK + + + +++ M++ PD +
Sbjct: 451 KGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAV 510
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
T+ T++ AL + E ++ +L EM +G+V
Sbjct: 511 TFETIIGALQERNETDKAEKLRLEMIERGLV 541
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 146/291 (50%), Gaps = 5/291 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A+E+L M GF D ++S C +L + L EM G +V
Sbjct: 82 GRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKEL--FDEMLGKGISANVV 139
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ ++ L + + +A +LN M GI PD+V YT +++G+ A +L + +
Sbjct: 140 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 199
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G P TYNV ++GLCK+ V K++ M E G K DV+TYNTL++ LC ++
Sbjct: 200 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 259
Query: 328 NRLRELVKEMKWKGIVL--NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +L M L N+ T++++I GL +G + +A + + + KG C ++
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 319
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ G + G +++A+EL KQ+ D P + + ++L+ K+ +N +
Sbjct: 320 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY-SILIDGFCKMRMLNIA 369
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 1/226 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V++ L + VF+A+G++ +M + PDIV Y ++NG+ + +A L E+ G
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+ T ++GLCK ++ ++++ M++ G DV+ Y TL+ C L+R +
Sbjct: 64 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL EM KGI N+ TYS ++ GL G EA +L G+ + I GL
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
C+ G A++LL M +K P + V +LLS + K V +F
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEP-SNVTYNVLLSGLCKEGLVIDAF 228
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 125/238 (52%), Gaps = 4/238 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+++ +C+ + L E +G + EM+ G CF V T ++ L K ++ +A+ +L MK
Sbjct: 39 LINGLCKAKKLK--EAVGLLLEMEAAG-CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 95
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G D+V Y +++G + + +ELFDE+L G+ +V TY+ ++GLC+ +
Sbjct: 96 KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 155
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
++ M E G PDV+TY L+ LCK +L+ M KG + TY++++
Sbjct: 156 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 215
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
GL +G +I+A +L + KG ++ + GLC +G V +AL+L M D +
Sbjct: 216 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 161/349 (46%), Gaps = 26/349 (7%)
Query: 84 HFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKI 142
+ V+K L N + ++ + ++ +P+ + + LI A + +++V L ++
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKS--VSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 59
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
E C N TC+ ++ +C +D DE + ++ MKK GF
Sbjct: 60 ------------EAAGCFPNS------VTCTTLMDGLC--KDGRMDEAMELLEAMKKKGF 99
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+V Y +I + + ++M GI ++V Y+ +++G+ + +A
Sbjct: 100 DADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANT 159
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ + + G+ PDV TY I+GLCK + ++ M E G +P +TYN LL LC
Sbjct: 160 VLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC 219
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K + ++++ M KG ++ TY+ ++ GL KG + EA L + C + +
Sbjct: 220 KEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN 279
Query: 383 M--FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ F+ I GLC+ G + KA+++ ++M K S G V +LL K
Sbjct: 280 VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG-SCGNLVTYNMLLGGCLK 327
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 6/294 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF--GMVDYT 210
A +IL MI G D T + ++ +C++ + DE L M C + +
Sbjct: 227 AFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV--DEALKLFNSMFDNENCLEPNVFTFN 284
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I L K+ ++ A+ I +M G ++V Y M+L G + +A EL+ ++L L
Sbjct: 285 MLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL 344
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G VP+ +TY++ I+G CK + + M G P + YNTL+ +LCK L +
Sbjct: 345 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 404
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ L +EM ++ +++ MIDG GD L + + GL + F I
Sbjct: 405 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 464
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
L + G + +A L++M +P A V+++LL SK D T I L+ Q+
Sbjct: 465 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGD--TTEIINLLHQM 516
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 140/278 (50%), Gaps = 4/278 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGK--TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+V A+++ N M ++ C++ T ++++ +C++ L+ + + ++M K G C
Sbjct: 257 GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT--KAVKIHRKMVKKGSCGN 314
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ +K K+ +A+ + Q+ G P+ Y+++++G A+ LF
Sbjct: 315 LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFC 374
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL P ++ YN + LCK+ ++E + M +PD+I++NT++ K
Sbjct: 375 EMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAG 434
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++EL +M G+ + T+S +I+ L+ G++ EA LE + G + ++D
Sbjct: 435 DFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYD 494
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GL +G + + LL QMA K ++ +L
Sbjct: 495 SLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 532
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 155/362 (42%), Gaps = 25/362 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDH-IEKRENFETPEFIFIDLIKTYADAHRFQDS 135
EP Y+ ++ L + D +L IEK + + + L+K D + ++
Sbjct: 205 EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV--VTYNTLMKGLCDKGKVDEA 262
Query: 136 VNLFYKI--------PK-FRIN----------RVGFAIEILNCMINDGFCVDGKTCSLIL 176
+ LF + P F N R+ A++I M+ G C + T +++L
Sbjct: 263 LKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL 322
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + E + +++ LGF Y+ +I K + A G+ +M++ G
Sbjct: 323 GGCLKAGKIK--EAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 380
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P + Y ++ + + +A+ LF E+ PD+ ++N I+G K + +
Sbjct: 381 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVK 440
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M E+G +PD +T++TL+ L K+ EL+ + ++ M G + Y ++ GL
Sbjct: 441 ELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGL 500
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+SKGD E LL + KG + + LC +ELL + S GA
Sbjct: 501 SSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFF-QGTSEGA 559
Query: 417 RV 418
+
Sbjct: 560 SI 561
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M G+ + T S+++ C + L S +L V + K G G Y +
Sbjct: 134 AVELAKKMSKRGYLLGSTTFSIVIP--CAVKVLESSDLCELVDDFIKKGGNLGFDMYIMI 191
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+S ++ + + A +QM SDG+ + Y +V++ + +A E + G
Sbjct: 192 IKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQESGF 251
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ T+N ING K NV + + E G PDVIT+ +L+ LC +L+
Sbjct: 252 SPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFN 311
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
EM G+ N+QTY+++I GL S G + +A LL + G+ + F+ I C
Sbjct: 312 CFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFC 371
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + KA +L M+ VSP + + AL+
Sbjct: 372 RMRKIEKAQKLFNDMSRYGVSPDSYTYNALI 402
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%)
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C ++ E + ++M K G+ G ++ VI VK + D +++ G
Sbjct: 124 CLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNL 183
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
Y M++ + +D KA + F +++ GL+ V +YN+ I+ K VE ++ I
Sbjct: 184 GFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETI 243
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M+E G P+++T+NTL+ K+ ++ + +K + G++ ++ T++ +IDGL
Sbjct: 244 KVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHT 303
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ +A E G+ ++ I GLC G V KA+ELL +M ++P A +
Sbjct: 304 HQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSF 363
Query: 420 EALLLS 425
A +LS
Sbjct: 364 NAPILS 369
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 130/274 (47%), Gaps = 24/274 (8%)
Query: 92 ENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVG 151
E+S C++ V D I+K N +I I IK++ R +
Sbjct: 165 ESSDLCEL--VDDFIKKGGNLGFDMYIMI--IKSF------------------LRCKDIS 202
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A + + M++DG ++ ++++ C + + L ++ M++ GF +V +
Sbjct: 203 KANKYFSQMVSDGLLSSVESYNIVID--CFAKAGEVERALETIKVMQESGFSPNLVTFNT 260
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I +K V DA L + G+ PD++ +T +++G+ A F E+ G
Sbjct: 261 LINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWG 320
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+V TYNV I+GLC +V I+++ M+ G PD ++N + + C++R++ + +
Sbjct: 321 VRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQ 380
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+L +M G+ + TY+ +I L + + EA
Sbjct: 381 KLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA 414
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 2/234 (0%)
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+I+ S +D+S + +M G + Y VI K +V AL + M+
Sbjct: 190 MIIKSFLRCKDISKAN--KYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIKVMQ 247
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G P++V + ++NG + + A+ ++ GL+PDV T+ I+GLC + ++
Sbjct: 248 ESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLD 307
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ M E G +P+V TYN L+ LC +++ EL+ +MK GI + +++ I
Sbjct: 308 DAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPI 367
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I +A L + G+ S ++ I LC V +A E++ M
Sbjct: 368 LSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAM 421
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 111/224 (49%), Gaps = 4/224 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E + M GF + T + +++ + ++ + F++ + + G ++ +T++
Sbjct: 239 ALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAK--AFLKMVMEHGLMPDVITFTSL 296
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L ++ DA ++M G++P++ Y ++++G+ KA EL +++ + G+
Sbjct: 297 IDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGI 356
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD Y++N I C+ +E K+ M G PD TYN L++ALC R ++ +E
Sbjct: 357 TPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKE 416
Query: 333 LVKEMKWKGIVLNLQ-TYSIMIDGLASKGDIIEACGLLEEALNK 375
++ M+ + Q TY ++ L G EA G+ L++
Sbjct: 417 IILAMESISCIGTKQHTYWPVVGALTKMGRFSEA-GMFMNKLHR 459
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G PD +TYN ++G+C++ V+ ++++ ME G +P+V+TY L+ C +
Sbjct: 5 GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 64
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+++ MK KG+ TY ++ G + A +L E + S + +
Sbjct: 65 VCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYC 124
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
L + + ++A+EL K+M+ + G+ + ++ +V L+ ++ LVD +
Sbjct: 125 LSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLE--SSDLCELVDDFI 177
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M DG D T + ++ VC + + DE L V++M++ G +V YT ++
Sbjct: 1 MPADGCRPDCFTYNTLVHGVCRRGIV--DEALRLVKQMERAGIRPNVVTYTMLVDGFCNA 58
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A+ +L +MK G+ Y +++G + +A + E + Y
Sbjct: 59 SRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAY 118
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ + L K + + +++ M + G T++ ++ KV E + L ELV +
Sbjct: 119 HTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIK 178
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG L Y ++I DI +A + ++ GL + ++ I + G V +
Sbjct: 179 KGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVER 238
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
ALE +K M + SP + L+
Sbjct: 239 ALETIKVMQESGFSPNLVTFNTLI 262
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 163/366 (44%), Gaps = 23/366 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SL+ S + EP Y+ VI L +N + + +EK+ + LI
Sbjct: 706 SLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK-GIVADAVTYNTLISG 764
Query: 126 YADAHRFQDSVNLFYKIPKFRIN-RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
++ R+ D+ L + K +I+ V F +++ + +G ++ K
Sbjct: 765 LCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKN------------- 811
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+EM + ++ Y ++I + ++ DA + + M S G PD+V Y
Sbjct: 812 --------LYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTY 863
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ G + +LF E+ GLV D +TYN I+G C+ + K+ M +
Sbjct: 864 NTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 923
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD++TYN LL LC ++ + +V++++ + +++ TY+I+I G+ + E
Sbjct: 924 CGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKE 983
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A L KG+ + + I GLC+ GL R+A +L +M + P R+++ L
Sbjct: 984 AWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043
Query: 425 SSVSKL 430
+ L
Sbjct: 1044 DHYTSL 1049
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 120/236 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ G EM + +VD+T V+ ++ K K + + ++M++ GI D+ +T++
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ + A L +++ LG P + T +NG C+ N + + ++ M ELG
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+V+ YNT++ LCK R+LN E+ M+ KGIV + TY+ +I GL + G +A
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL + + + + F I + G + +A L K+M + V P + +L+
Sbjct: 777 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLI 832
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 150 VGFAIEILNCMINDG-FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
V A+E+LN M G D T + +L+ +C + + +++M K +
Sbjct: 186 VNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARI--LRDMTKRRINPDVFT 243
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+T +I + VK+ + +A + QM I P+ V Y ++NG+ + A++ FD +
Sbjct: 244 FTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMA 303
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P+V TYN ING CK VE G+K+ M G D TYNTL+ C+V +L
Sbjct: 304 SKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLR 363
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+++ M G+ ++ T+ I++ GL G+I A + + ++ I
Sbjct: 364 VAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMI 423
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GLC+ V +A EL ++ + V P AR + ++L
Sbjct: 424 HGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILG 460
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 112/236 (47%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ +M+ LG + +T +I + + AL +L +M G +P IV +
Sbjct: 632 DIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSL 691
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG + +A L D + LGL P+V YN INGLCK ++ +++ ME+ G
Sbjct: 692 LNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGI 751
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
D +TYNTL+ LC L+++M + I N+ ++ +ID +G+++EA
Sbjct: 752 VADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKN 811
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E + + + ++ I G C +G + A + M K P + L+
Sbjct: 812 LYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLI 867
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 4/299 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + + M N G D + ++++ C S L + +M KLGF
Sbjct: 627 KMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLA--LALLGKMMKLGFQPS 684
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +++ + + +A+ +++ M G++P++V Y V+NG+ D A E+F
Sbjct: 685 IVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFY 744
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G+V D TYN I+GLC +++ M + P+VI + L+ K
Sbjct: 745 GMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 804
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + L KEM + + N+ TY+ +I+G +G + +A + + ++KG ++
Sbjct: 805 NLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYN 864
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
I G C+ V ++L +M + + A + L+ KL+ F R+VD
Sbjct: 865 TLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 923
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F Q+M+ G + +T +I + ++ AL IL +M G P IV + +L+G
Sbjct: 87 FSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFC 146
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDV 311
++ A L ++ G P+V YN I+ LCK +V ++++ ME+ G D+
Sbjct: 147 LRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADL 206
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TYNTLL LC E + ++++M + I ++ T++ +ID +G++ EA L ++
Sbjct: 207 VTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQ 266
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + + ++ I GLC G + A + MA K P + L+
Sbjct: 267 MLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLI 318
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 9/328 (2%)
Query: 98 DISSVLDHIEKRENFETPEFIF--IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
D + VL I K F+ ++F ++ + D + F ++ F + +F + A+
Sbjct: 617 DFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSL-----ALA 671
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L M+ GF T +L+ C+ E + V M +LG +V Y VI
Sbjct: 672 LLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQ--EAVSLVDSMAELGLEPNVVIYNTVING 729
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K + +AL I M+ GI D V Y +++G+ + A L +++ + P+
Sbjct: 730 LCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPN 789
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V + I+ K+ N+ + M P+++TYN+L+ C L + +
Sbjct: 790 VIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFD 849
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M KG ++ TY+ +I G + + L E ++GL + ++ I G CQ G
Sbjct: 850 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAG 909
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+ A ++ +M D V P + LL
Sbjct: 910 KLNVAQKVFNRMVDCGVPPDIVTYNILL 937
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 156/388 (40%), Gaps = 38/388 (9%)
Query: 43 KQSLTTPPTKQQQQIPKQPHILS--SLLHSFSIYN----------------CEPPPEAYH 84
+ SL + ++ P I++ SLLH F + N EP Y+
Sbjct: 115 RLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYN 174
Query: 85 FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK 144
+I L +N +L+ +EK+ + L+ + ++ + + + K
Sbjct: 175 TLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTK 234
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
RIN D T + ++ + +Q +L DE ++M +
Sbjct: 235 RRINP------------------DVFTFTALIDAFVKQGNL--DEAQELYKQMLQSSIGP 274
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y ++I L +++ A + M S G P++V Y ++NG +LF
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ GLV D +TYN I+G C+ + + + M G PD+IT+ LL LC
Sbjct: 335 QRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVN 394
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
E+ +M+ L + Y+IMI GL + EA L +G+ + +
Sbjct: 395 GEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTY 454
Query: 385 DETICGLCQRGLVRKALELLKQMADKDV 412
I GLC+ G R+A EL ++M + +
Sbjct: 455 TIMILGLCKNGPRREADELFRRMKEDGI 482
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+VD+T ++ ++ + + QM+ GI D+ +T++++ A +
Sbjct: 65 VVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILG 124
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ LG P + T+ ++G C +N + ++A M + G +P+V+ YNTL+ LCK
Sbjct: 125 KMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNG 184
Query: 326 ELNRLRELVKEMKWKG-IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++N EL+ EM+ KG + +L TY+ ++ GL G+ +A +L + + + F
Sbjct: 185 DVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTF 244
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I ++G + +A EL KQM + P + +L+
Sbjct: 245 TALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLI 283
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL + +M P +V +T +L + Y ++ + G+ D+Y++ + I
Sbjct: 48 DALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILI 107
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ C+ + + + ++ M +LG P ++T+ +LL C ++ LV M G
Sbjct: 108 HCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYE 167
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKG-LCTQSSMFDETICGLCQRGLVRKALE 402
N+ Y+ +ID L GD+ A LL E KG L ++ + GLC G R+A
Sbjct: 168 PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAAR 227
Query: 403 LLKQMADKDVSPGARVWEALL 423
+L+ M + ++P + AL+
Sbjct: 228 ILRDMTKRRINPDVFTFTALI 248
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 167/375 (44%), Gaps = 40/375 (10%)
Query: 75 NCEPPPEA--YHFVIKTLAENSQFCDISSVLDHIE--KRENFETPEFIFIDLIKTYADAH 130
+ P P A Y+ VI++L + D++ L ++ R + + F LI Y +
Sbjct: 146 HAPPAPTAPTYNAVIRSLCRRA---DLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTN 202
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILN-CMINDGFCVDGKTCSLI-LSSVCEQRDLS-- 186
+ + +LF K+P R GFA ++++ + +G C G+ + L +Q D+
Sbjct: 203 QVDVARDLFDKMP-LR----GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMY 257
Query: 187 ------------SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+E L ++ MK+LG+ Y V+ ++ K +A +L +M
Sbjct: 258 AALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFE 317
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL------GLVPDVYTYNVYINGLCK 288
G+ P +V T V+N Y K + D L VL G P+V+TYN + G C
Sbjct: 318 KGLAPCVVTCTAVINA------YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCN 371
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ V + ++ M G PD +TYN L++ C + L++ M+ G++ + T
Sbjct: 372 EGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 431
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ +I+ L G +AC L + +G+ + F+ I GLC+ G A + L++M
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 491
Query: 409 DKDVSPGARVWEALL 423
+P + + +
Sbjct: 492 SAGCTPDTYTYSSFI 506
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 158/350 (45%), Gaps = 18/350 (5%)
Query: 80 PEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P+AY F +I +Q + D + R F + LI+ +A R ++V
Sbjct: 186 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLR-GFAQDVVSYATLIEGLCEAGRIDEAVE 244
Query: 138 LFYKIPKFRINRVGFAIE-------------ILNCMINDGFCVDGKTCSLILSSVCEQRD 184
LF ++ + ++ ++ +L M G+ + + ++ C +R
Sbjct: 245 LFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERK 304
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
E + +QEM + G +V T VI + K+ ++ DAL +L MK G KP++ Y
Sbjct: 305 AKEAEEM--LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 362
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ G + KA L +++ G+ PD TYN+ I G C ++E+ +++ ME
Sbjct: 363 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 422
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G D TYN L+ ALCK ++ L ++ +GI N T++ +I+GL G
Sbjct: 423 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 482
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
A LE+ ++ G + + I LC+ ++ L + +M KDV P
Sbjct: 483 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 532
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 11/298 (3%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A+ +LN M G D T +L++ C + S ++ M+ G
Sbjct: 373 GKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES--AFRLLRLMEGDGLIADQY 430
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I +L K + A + + +++ GIKP+ V + ++NG+ A + +++
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 490
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G PD YTY+ +I LCK + G+ I M + KP + Y ++ L K R
Sbjct: 491 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 550
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ EM G ++ TY+ + +G + EA +L E G+ + ++
Sbjct: 551 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 610
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ G G A+ +LKQM P + LL V +RLV+ +L
Sbjct: 611 MDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR---------MRLVEDVL 659
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 123/328 (37%), Gaps = 54/328 (16%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ A + L M++ G D T S + +C+ + S E L F+ EM + V
Sbjct: 478 GKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK--GSQEGLSFIGEMLQKDVKPSTV 535
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+YT VI L+K+ +M S G PD+V YT + ++ +AE + E+
Sbjct: 536 NYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 595
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ D YN ++G + + ++ M + S P+ TY LL+ L ++R +
Sbjct: 596 SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLV 655
Query: 328 NRLRELVKEMKWKGIVL-----------------NLQTYSIMIDGLASKGDIIEACGLLE 370
+ L WK I L N TYS +++G + G EA L+
Sbjct: 656 EDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVS 715
Query: 371 --------------EALNKGLCTQSSMFDE--TICGLCQRGLVR---------------- 398
AL C D +C + Q G +
Sbjct: 716 LMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEG 775
Query: 399 ---KALELLKQMADKDVSPGARVWEALL 423
KA E+ KD SP VW+ ++
Sbjct: 776 QTDKAKEIFMNSRWKDYSPDEIVWKVII 803
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 112/292 (38%), Gaps = 25/292 (8%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
G M++ G D T + + + C + L+ E + EM K G + Y
Sbjct: 551 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE--NVLMEMSKNGVTVDTMAYN 608
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI---VQEDYV--------K 259
++ + A+ IL QM S P+ Y ++L ++ + ED + K
Sbjct: 609 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 668
Query: 260 AEELFDELLVLGL---------VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
A EL D V GL +P+ TY+ + G + E +++ M+E +
Sbjct: 669 AIELTD---VFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 725
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
Y L+ CK + LV M G + L +Y ++ GL +G +A +
Sbjct: 726 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFM 785
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ K ++ I GL ++G + E++ + + P + + L
Sbjct: 786 NSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 837
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 37/204 (18%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ + M + F + T S IL E D ++E V MK+ YT ++
Sbjct: 678 LFDVMKKNEFLPNSGTYSSILEGFSE--DGRTEEATSLVSLMKEDSISLNEDIYTALVTC 735
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K ++ DA ++ M G P ++ Y +L+G+I + KA+E+F PD
Sbjct: 736 FCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPD 795
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ V I+GL K+ + + +MI +E + +P
Sbjct: 796 EIVWKVIIDGLIKKGHSDISREMIIMLERMNCRP-------------------------- 829
Query: 336 EMKWKGIVLNLQTYSIMIDGLASK 359
+ QTY+++ + L +
Sbjct: 830 ---------SHQTYAMLTEELPDR 844
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 152/324 (46%), Gaps = 22/324 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y + TLA+ +F I +L+H +K+ N + E + L+ Y A F+ + LF ++
Sbjct: 60 YEKAVLTLAKAKKFSFIEDILEH-QKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEL 118
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLG 201
PK R + N +++ CV+ K D++ GF QE+ LG
Sbjct: 119 PKLNCERT---VVSFNALLS--VCVNSKKF---------------DKIDGFFQELPGNLG 158
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V Y ++ + + + AL +L++M+ G++PD++ + +LN Y E
Sbjct: 159 VVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGE 218
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+++D + + P+V +YN + G+ +N + +++I M+ G KPDV T N+L++
Sbjct: 219 KIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGF 278
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C L + E+ + TY +I L KGD A L +E ++ +
Sbjct: 279 CNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEP 338
Query: 382 SMFDETICGLCQRGLVRKALELLK 405
++ + + GL + + +A EL++
Sbjct: 339 ALLQQVLEGLVKESKIEEATELVE 362
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL----GSKPDVITYN 315
A +LFDEL L V ++N ++ +C N + K+ +EL G PDV++YN
Sbjct: 111 AHKLFDELPKLNCERTVVSFNALLS-VCV--NSKKFDKIDGFFQELPGNLGVVPDVVSYN 167
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++ A C++ L+ ++ EM+ G+ +L T++ +++ G + + +
Sbjct: 168 IIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKN 227
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ + G+ + +A+EL+ +M + P +L+
Sbjct: 228 NVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLM 275
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK-GIVLNL 346
K E K+ + +L + V+++N LL ++ +++ +E+ G+V ++
Sbjct: 104 KAGMFEHAHKLFDELPKLNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDV 163
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+Y+I+++ G + A +L+E GL F+ + Q G ++
Sbjct: 164 VSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDL 223
Query: 407 MADKDVSPGARVWEALLLSSVSK 429
M +V+P R + A L +S+
Sbjct: 224 MKKNNVAPNVRSYNAKLRGVISE 246
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 180/386 (46%), Gaps = 59/386 (15%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
+++ +I++ A + F + VL H KRE E FI + K Y AH + +V+LF++
Sbjct: 63 SFYSLIESHASSLDFRSLEEVL-HQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHR 121
Query: 142 I-PKFRINRVGFAI-EILNCMINDGF----------CVDGK---------TCSLILSSVC 180
+ +F+ + + +LN ++ +G V K T +L++ ++C
Sbjct: 122 MWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMC 181
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
R D+ + +E+ Y+ ++ L K+E++ +A+ +L++M+ +G P+
Sbjct: 182 --RLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPN 239
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA------ 294
+V + ++++ + + D +A +L D + + G VP+ TYN ++GLC + +E
Sbjct: 240 LVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLN 299
Query: 295 -----------------------------GIKMIACMEELGSKPDVITYNTLLQALCKVR 325
G +++ +E G + + Y++L+ LCK
Sbjct: 300 QMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEG 359
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ N+ EL KEM KG N YS +IDGL +G + EA G L E NKG S +
Sbjct: 360 KFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYS 419
Query: 386 ETICGLCQRGLVRKALELLKQMADKD 411
+ G + G KA+ + K+MA+ +
Sbjct: 420 SLMRGYFEAGDSHKAILVWKEMANNN 445
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 165/388 (42%), Gaps = 56/388 (14%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHI--EKRENFETPEFIFIDLIKTYADAHR 131
+ C+ ++++ V+ + + F +H+ K N F +IK
Sbjct: 126 FQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGL 185
Query: 132 FQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSL 174
++ +F +IP + R+ A+ +L+ M +G + ++
Sbjct: 186 VDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNV 245
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++S++C++ DL L V M G V Y ++ L K K+ A+ +LNQM S
Sbjct: 246 LISALCKKGDLGRAAKL--VDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVS 303
Query: 235 DGIKPDIVCYTMVLNGVIVQ--------------------EDYV---------------K 259
+ P+ V + ++NG ++Q +YV +
Sbjct: 304 NKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQ 363
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A EL+ E++ G P+ Y+ I+GLC++ ++ ++ M+ G P+ TY++L++
Sbjct: 364 AMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMR 423
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
+ + ++ + KEM + N YSI+I+GL G +EA + ++ L++G+
Sbjct: 424 GYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKL 483
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQM 407
+ I G C LV + L+L QM
Sbjct: 484 DVVAYSSMIHGFCNANLVEQGLKLFNQM 511
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 157/359 (43%), Gaps = 44/359 (12%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL+ C P + +I + D + VL +E R + E+++ LI
Sbjct: 296 SLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGH-RGNEYVYSSLISG 354
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+F ++ L+ ++ + + I+ + DG C +GK
Sbjct: 355 LCKEGKFNQAMELWKEM----VGKGCGPNTIVYSALIDGLCREGKL-------------- 396
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
DE GF+ EMK G+ Y++++R + A+ + +M ++ + VCY+
Sbjct: 397 --DEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYS 454
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++NG+ +++A ++ ++L G+ DV Y+ I+G C N VE G+K+ M
Sbjct: 455 ILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQ 514
Query: 306 GS--KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI---------- 353
G +PDVITYN LL A C + + R +++ M +G + T I +
Sbjct: 515 GPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPP 574
Query: 354 -DG----------LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
DG L + I A ++E ++K L ++S + + +C+ VRKA+
Sbjct: 575 QDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKAI 633
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 126/280 (45%), Gaps = 26/280 (9%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S ++S +C++ ++ + +EM G + Y+ +I L ++ K+ +A G L++M
Sbjct: 349 SSLISGLCKEGKF--NQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEM 406
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K+ G P+ Y+ ++ G D KA ++ E+ + + Y++ INGLCK
Sbjct: 407 KNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKF 466
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL--NLQTYS 350
+ + M G K DV+ Y++++ C + + +L +M +G V+ ++ TY+
Sbjct: 467 MEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYN 526
Query: 351 IMIDGLASKGDIIEACGLLEEALNKG------LC---------------TQSSMFDETIC 389
I+++ + I A +L L++G C DE +
Sbjct: 527 ILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVV 586
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
L +R A ++++ M K + P A W A+++ V K
Sbjct: 587 RLVKRQRTIGASKIIEVMMHKFLLPKASTW-AMVVQQVCK 625
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 119/241 (49%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ M+ G + Y +I L K + +L +M+ I P+ Y ++NG++
Sbjct: 32 LIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLM 91
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ A +F+E+L+L L P+ TYN+ I+G C N E ++++ ME G +PD +
Sbjct: 92 KERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEV 151
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y LL L K+ + + + L++ ++ G+V+ + Y+ MIDGL G + E+ LL+
Sbjct: 152 NYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMM 211
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
G F I G C+ G ++ A E++ +M ++P ++ L+ +S K D
Sbjct: 212 FKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDI 271
Query: 433 V 433
Sbjct: 272 T 272
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 6/240 (2%)
Query: 207 VDY--TNV-IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
VDY NV I SL + +V +A + M + + P+ + + ++NG + D +KA +
Sbjct: 288 VDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSM 347
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
FDE++ LG P +TY + GLCK N+ K++ + + + D YNT+L CK
Sbjct: 348 FDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCK 407
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG-LCTQSS 382
+L+ L EM ++ + TY+I++ GL+ KG ++ A E+AL +G L
Sbjct: 408 RGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKV 467
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
M+ GL + G A + ++M K ++P A+L S + K++ V FI++
Sbjct: 468 MYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKM 527
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 154/362 (42%), Gaps = 28/362 (7%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y+ +I L +N++ +L + KR EF + LI + + +F ++
Sbjct: 48 YNMLIDDLCKNNRSAKGYLLLKKMRKRM-IAPNEFTYNTLINGLMKERKIGGATRVFNEM 106
Query: 143 PKFRI--NRVGFAIEILNCMINDGFCVDGK-TCSLILSSVCEQRDLSSDE-----LLGFV 194
+ NRV + I I DG C G +L L V E + L DE LL +
Sbjct: 107 LMLNLSPNRVTYNILI------DGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGL 160
Query: 195 QEMKKL-------------GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
++ K G G YT +I L K + ++L +L+ M DG PDI
Sbjct: 161 SKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDI 220
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
+ +++++NG A+E+ ++ GL P+ Y I CK+ ++ + A
Sbjct: 221 ITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYAT 280
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M G D N L+ +LC+ + + ++ M + N T+ +I+G GD
Sbjct: 281 MTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGD 340
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
++A + +E + G C + + GLC+ G +R+A +LL ++ + ++
Sbjct: 341 ALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNT 400
Query: 422 LL 423
+L
Sbjct: 401 IL 402
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 94/183 (51%)
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M+S + P + Y ++L+G ++D +K + ++ + +G+ PD T + I GLCK
Sbjct: 526 KMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSG 585
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ G KM+ M + D +T N L+ C+ ++ + +L+ GI+ ++ TY+
Sbjct: 586 MLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYN 645
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+ GL + E+ LL + L +G+ S+ + I G+C+ G ++ A L +M
Sbjct: 646 AIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAI 705
Query: 411 DVS 413
VS
Sbjct: 706 GVS 708
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 113/235 (48%), Gaps = 4/235 (1%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
VGF ++L MI + VD T ++++++ CE + L ++ + LG + Y
Sbjct: 589 VGF--KMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNL--LGIIPDVNTY 644
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ L + + ++ +L+ M GI P Y ++NG+ D A L DE+
Sbjct: 645 NAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEA 704
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+G+ + + GL + VE + ++ CM + P V T+ TL+ LCK +L+
Sbjct: 705 IGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSE 764
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L +M G+ L++ Y+++I GL + GD + A L EE +GL ++ +
Sbjct: 765 ALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTY 819
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+++G A ++LN G D T + I + + L LL + +M + G
Sbjct: 620 DKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLL--LHDMLERGITPTST 677
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++I + + + A + ++M++ G+ V + ++ G+ +A + D +
Sbjct: 678 QYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCM 737
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L L+P V T+ ++ LCK+ + +K+ M G K DV+ YN L+ LC +
Sbjct: 738 LQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDA 797
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
L +EMK +G+ N TY +ID +++ +E
Sbjct: 798 LAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVE 834
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F M ++G + ++I L K + +L +M + D + M++
Sbjct: 558 FYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSC 617
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ KA +L + +LG++PDV TYN GL + + + ++ M E G P
Sbjct: 618 ETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTST 677
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y +L+ +C++ ++ L EM+ G+ S M+ GLA G + EA +L+
Sbjct: 678 QYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCM 737
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
L K L + F + LC++ + +AL+L +MA
Sbjct: 738 LQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMA 773
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 139/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ FA+ IL M+ G+ T + +L+ C +S E + V +M ++G+
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS--EAVALVDQMVEMGYQPD 169
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T ++ L + K +A+ ++ +M G +PD+V Y V+NG+ + + A L +
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV Y+ I+ LCK +V+ + + M+ G +PDV TY++L+ LC
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I N+ T++ +ID A +G +IEA L +E + + + ++
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A ++ M KD P + L+
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 131/263 (49%), Gaps = 2/263 (0%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+ +LN M D S ++ S+C+ R + D+ L EM G + Y++
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV--DDALNLFTEMDNKGIRPDVFTYSS 280
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L + DA +L+ M I P++V + +++ + ++AE+LFDE++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P++ TYN ING C + ++ ++ M PDV+TYNTL+ CK +++
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL ++M +G+V N TY+ +I G D A + ++ ++ G+ ++ + GL
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 392 CQRGLVRKALELLKQMADKDVSP 414
C+ G + KA+ + + + + P
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEP 483
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 132/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++++ +C + LS L + +M KLG+ +V +++ ++ +A+ +++
Sbjct: 102 TYNIMINCLCRRSQLSF--ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G +PD V +T +++G+ +A L + ++V G PD+ TY INGLCK+
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + ++ ME+ + DV+ Y+T++ +LCK R ++ L EM KGI ++ TYS
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I L + G +A LL + L + + F+ I + G + +A +L +M +
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 411 DVSPGARVWEALL 423
+ P + +L+
Sbjct: 340 SIDPNIVTYNSLI 352
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +LS++ + + D ++ F ++M+ LG + Y +I L ++ ++ AL IL +M
Sbjct: 69 SKLLSAIAKMKKF--DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM 126
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G P IV +LNG +A L D+++ +G PD T+ ++GL + N
Sbjct: 127 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 186
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M G +PD++TY ++ LCK E + L+ +M+ I ++ YS +
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
ID L + +A L E NKG+ + I LC G A LL M ++ +
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 413 SPGARVWEALL 423
+P + +L+
Sbjct: 307 NPNVVTFNSLI 317
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 28/316 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D +E++ N P + F LI +A + +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN---PNVVTFNSLIDAFAKEGKLIE 328
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK------TCSLILSSVCEQRDLSSD 188
+ LF ++ + I+ I N +IN GFC+ + +L++S C ++ +
Sbjct: 329 AEKLFDEMIQRSIDP---NIVTYNSLIN-GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 189 ELL-GF------------VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L+ GF ++M + G V YT +I + +A + QM SD
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ P+I+ Y +L+G+ KA +F+ L + PD+YTYN+ G+CK VE G
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ + G KPDVI YNT++ CK L +MK G + + TY+ +I
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 356 LASKGDIIEACGLLEE 371
GD + L++E
Sbjct: 565 HLRDGDKAASAELIKE 580
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 2/279 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ N+ A+ ++ M+ G D T +++ +C++ + D L + +M+K
Sbjct: 181 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE--PDLALNLLNKMEKGKIEA 238
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y+ VI SL K V DAL + +M + GI+PD+ Y+ +++ + + A L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++L + P+V T+N I+ K+ + K+ M + P+++TYN+L+ C
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L+ +++ M K + ++ TY+ +I+G +++ L + +GL + +
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G Q A + KQM V P + LL
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 168/401 (41%), Gaps = 56/401 (13%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+L+ + C+P Y VI L + + ++L+ +EK + E I+ +I +
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYSTVIDS 249
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
D++NLF + M N G D T S ++S +C
Sbjct: 250 LCKYRHVDDALNLFTE------------------MDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
S L + +M + +V + ++I + K+ K+ +A + ++M I P+IV Y
Sbjct: 292 SDASRL--LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++NG + + +A+++F ++ +PDV TYN ING CK V G+++ M
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 306 G-----------------------------------SKPDVITYNTLLQALCKVRELNRL 330
G P+++TYNTLL LCK +L +
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ + ++ + ++ TY+IM +G+ G + + L KG+ ++ I G
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
C++GL +A L +M + P + + L+ + + D
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A+ +++ M+ G+ D T + ++ + + S E + V+ M G +V
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS--EAVALVERMVVKGCQPDLV 206
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y VI L K+ + AL +LN+M+ I+ D+V Y+ V++ + A LF E+
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ PDV+TY+ I+ LC ++++ M E P+V+T+N+L+ A K +L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+L EM + I N+ TY+ +I+G + EA + ++K ++
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ V +EL + M+ + + + L+
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 114/239 (47%)
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L DE + EM K +V+++ ++ ++ K +K + +M+ G+ ++ Y
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++N + + A + +++ LG P + T N +NG C N + + ++ M E
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
+G +PD +T+ TL+ L + + + LV+ M KG +L TY +I+GL +G+
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL + + ++ I LC+ V AL L +M +K + P + +L+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 3/281 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F + ++ AI+++ + G D + ++S C+ + D + MKK GF
Sbjct: 123 FNMKKIEKAIQVMEILEKHGK-PDVFAYNAVISGFCKADRV--DHASKVLDRMKKRGFEP 179
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y +I + + ++ AL +++Q+ D KP ++ YT+++ I Q +A +L
Sbjct: 180 DVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLL 239
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L GL PD YTYNV +NG+CK+ ++ + ++ + + G V TYN LL+ L
Sbjct: 240 DEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNE 299
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ +L+ +M KG N TYS +I L G I EA +L+ K L +
Sbjct: 300 GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSY 359
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
D I LC+ G V A+E L M P + ++L S
Sbjct: 360 DPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILAS 400
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 165/348 (47%), Gaps = 20/348 (5%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P AY+ VI + + S VLD ++KR FE + LI + R ++
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKR-GFEPDVVTYNILIGNFCGRGRLDLAL 201
Query: 137 NLFYKIPK---------------FRINRVGF--AIEILNCMINDGFCVDGKTCSLILSSV 179
+ ++ K I + G A+++L+ M++ G D T +++++ +
Sbjct: 202 RVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGM 261
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C++ L D F+ + K G G+ Y ++R L+ + K +++ M G +P
Sbjct: 262 CKEGML--DRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEP 319
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
+ + Y+ ++ + +A+ + + L PD Y+Y+ I+ LC++ V+ I+ +
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFL 379
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M G PD+++YN++L +LCK + + +++ G N +Y+ + L S
Sbjct: 380 DDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSS 439
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
GD I A G++ E L+ G+ ++ I LC+ GLV +A+ELL M
Sbjct: 440 GDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDM 487
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 210 TNVIRSL---VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
TN +++L K K ++L L M + G KPD++ T ++ G + KA ++ E
Sbjct: 78 TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-E 136
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L PDV+ YN I+G CK + V+ K++ M++ G +PDV+TYN L+ C
Sbjct: 137 ILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L+ ++ ++ + TY+I+I+ ++G I EA LL+E L++GL ++
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+C+ G++ +A E L +++ G + LL
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILL 293
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 6/228 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A +L M DG + ++S++C R+ D + F+ +M G
Sbjct: 333 RDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALC--REGKVDLAIEFLDDMISGGHLPD 390
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +++ SL K +AL I ++ G P+ Y + + D ++A +
Sbjct: 391 ILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMIL 450
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-EELGSKPDVITYNTLLQALCKV 324
E+L G+ PD TYN I+ LC+ V+ I+++ M E +P VI+YNT+L LCKV
Sbjct: 451 EMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKV 510
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG---DIIEACGLL 369
+ + E++ M +G + N TY+++I G+ G D +E LL
Sbjct: 511 QRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLL 558
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 9/246 (3%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S +++++C RD DE ++ MK+ Y +I +L ++ KV A+ L+
Sbjct: 323 TYSTLITALC--RDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLD 380
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M S G PDI+ Y +L + + +A +F++L +G P+ +YN L
Sbjct: 381 DMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSG 440
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM----KWKGIVLNL 346
+ + MI M G PD ITYN+L+ LC+ +++ EL+ +M K + V+
Sbjct: 441 DKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVI-- 498
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+Y+ ++ GL II+A +L +N+G + + I G+ G A+EL
Sbjct: 499 -SYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANL 557
Query: 407 MADKDV 412
+ + D
Sbjct: 558 LVNMDA 563
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 154/339 (45%), Gaps = 22/339 (6%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
+ +I L ++F +L+ + K E E IF+ + + Y H D++ +F+K
Sbjct: 52 TFGVMISKLVSANEFRPAEEMLNRM-KEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHK 110
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ F C D K+ + + + E+ L + F + M+++G
Sbjct: 111 MNDF------------GCKPTD------KSYISVFAILVEENQLKV--AMSFYKYMREMG 150
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDA-LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
+V +I++L K DA I +M G PD Y ++NG+ +A
Sbjct: 151 VRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEA 210
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ELF E+ G P V TY+ ++GLC+ NV+ + + M++ +P+V TY++L+
Sbjct: 211 KELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDG 270
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK EL++ M K N+ TYS +I+GL +G + EA L+ +GL
Sbjct: 271 LCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPD 330
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ ++ + I G C ++A L +M +SP W
Sbjct: 331 AGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTW 369
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 158/365 (43%), Gaps = 29/365 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ H + + C+P ++Y V L E +Q S ++ RE +
Sbjct: 107 VFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYM--REMGVRQSVV-------- 156
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDL 185
S+N+ K + A EI M G D T +++ +C+ +
Sbjct: 157 --------SLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTF 208
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ EL +EM G +V Y+ ++ L + V +A+G+ ++MK I+P++ Y+
Sbjct: 209 EAKELF---KEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYS 265
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++G+ ++A EL + ++ P++ TY+ INGLCK+ + ++ + M+
Sbjct: 266 SLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQ 325
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI-------MIDGLAS 358
G KPD Y ++ C +R+ + EM I N T+S+ ++ GL +
Sbjct: 326 GLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCT 385
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G++ + L +G+ + FD + C++G + KA + +M P +
Sbjct: 386 NGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGI 445
Query: 419 WEALL 423
W A++
Sbjct: 446 WSAVV 450
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 157/339 (46%), Gaps = 27/339 (7%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV-------- 150
+E + + ++F LI Y ++ +D++ + + +P +V
Sbjct: 48 LETKGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLK 107
Query: 151 ------GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
GF EIL C G+ ++++ C++ ++ + K G
Sbjct: 108 YFKLVWGFYKEILEC----GYPASLYFFNILMHRFCKEGEIRVAR--SVFDAITKWGLRP 161
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V + ++ ++ + + + + M + G++PD+ Y++++NG+ + A ELF
Sbjct: 162 SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELF 221
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L GLVP+ T+ I+G CK V+ +++ M D+ITYNTL+ LCK
Sbjct: 222 DEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKK 281
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L + + L+ EM+ KG+ + TY+ +IDG +GD+ A + + + + ++
Sbjct: 282 GDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVY 341
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLCQ G A ++L++M + P + ++
Sbjct: 342 TTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 380
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 4/232 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCF 204
R+ + + + M G D T S++++ +C++ + ++EL EM G
Sbjct: 175 RLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELF---DEMLDKGLVP 231
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V +T +I K +V A+ I QM S + D++ Y ++ G+ + D +A+ L
Sbjct: 232 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLI 291
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+ + GL PD TY I+G CK+ ++E + M + + D + Y TL+ LC+
Sbjct: 292 DEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQE 351
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 352 GRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 403
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 2/201 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+++ A E+ + M++ G +G T + ++ C+ + D + ++M ++
Sbjct: 212 SKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSADLI 269
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L KK + A ++++M+ G+KPD + YT +++G + D A E +
Sbjct: 270 TYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRM 329
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + D Y I+GLC++ KM+ M +G KPD TY ++ CK ++
Sbjct: 330 IQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDV 389
Query: 328 NRLRELVKEMKWKGIVLNLQT 348
+L+KEM+ G V ++ T
Sbjct: 390 WTGSKLLKEMQRDGHVPSVVT 410
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 133/270 (49%), Gaps = 17/270 (6%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
NC+I DGF +G S + L EM K+G + YTN+I
Sbjct: 577 NCII-DGFVKEG----------------SVNSALAVYTEMCKIGVSPNVFTYTNLINGFC 619
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K + AL ++++MK+ GI+ D+ Y +++G + D V A +L EL +GL P+
Sbjct: 620 KSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKV 679
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
Y+ I+G K N+EA + + M G D+ Y TL+ L K +L EL EM
Sbjct: 680 VYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEM 739
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
KGI+ +L TYS++I GL +KG + A +LE+ K + +++ I G + G +
Sbjct: 740 LAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNL 799
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSV 427
++A L +M DK + P ++ L+ V
Sbjct: 800 QEAFRLHNEMLDKGLVPDDTTYDILVNGKV 829
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 121/244 (49%), Gaps = 2/244 (0%)
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C+Q D+ S G EM + G ++ Y+ ++ KK A G+ ++M+ + I P
Sbjct: 479 CQQGDMDSAN--GVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAP 536
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
+++NG+ ++++ +L+ G +P TYN I+G K+ +V + + +
Sbjct: 537 SDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVY 596
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M ++G P+V TY L+ CK ++ +++ EMK KGI L++ Y +IDG K
Sbjct: 597 TEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRK 656
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
GD++ A LL E GL ++ I G + + AL L K+M ++ + +++
Sbjct: 657 GDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIY 716
Query: 420 EALL 423
L+
Sbjct: 717 TTLI 720
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 3/271 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ M++ G ++ + ++ C+Q DL D L +M + G C V Y +
Sbjct: 313 AVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDL--DSALELFDKMNENGICPNNVTYAVI 370
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K + A I NQMK+ I P + ++ G + +A +LFDE + G
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG- 429
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ +V+TYN ++ LCK+ + + M G +P V++YN ++ C+ +++
Sbjct: 430 IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANG 489
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM KG+ NL TYS+++DG KGD A GL + + + + I GLC
Sbjct: 490 VFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLC 549
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++ + LK++ + P + ++
Sbjct: 550 KAGRTSESQDRLKKLVQEGFIPTCMTYNCII 580
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 180/399 (45%), Gaps = 38/399 (9%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+LL+ F+ + P P V+ L E+S +R +FE+ +F L+ +
Sbjct: 120 NLLNRFASDDWGPVPSV---VVARLIESS-------------RRLDFESDSRVFNYLLNS 163
Query: 126 YADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVD 168
Y R D+V+ F + + I N + A ++ N M + G D
Sbjct: 164 YVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGD 223
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S+++ + R+ +E G+ +E K G Y+ VI ++ KK ALG+
Sbjct: 224 CATISVMIRA--SMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGL 281
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L +M+ G P V +T V+ + Q ++A ++ E+L G +V + G CK
Sbjct: 282 LREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCK 341
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
Q ++++ +++ M E G P+ +TY +++ CK +++ E+ +MK K I +
Sbjct: 342 QGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFN 401
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
+ +I G EA L +EA+ G+ + ++ + LC+ G + +A + ++M
Sbjct: 402 VNSLIRGYLKARSPEEASKLFDEAVACGIANVFT-YNSLLSWLCKEGKMSEACSIWEKMV 460
Query: 409 DKDVSPGARVWEALLLSSVSK--LDFVNTSFIRLVDQIL 445
K V P + ++L + +D N F+ ++++ L
Sbjct: 461 RKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGL 499
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 115/218 (52%), Gaps = 2/218 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + A+++++ M N G +D ++ C + D+ + L + E++++G V
Sbjct: 622 NNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQL--LSELQEVGLSPNKV 679
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+++I K + + AL + +M ++GI D+ YT +++G++ + + A EL+ E+
Sbjct: 680 VYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEM 739
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G++PD+ TY+V I+GLC + +E K++ M+ P V YNTL+ K L
Sbjct: 740 LAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNL 799
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
L EM KG+V + TY I+++G G++
Sbjct: 800 QEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSG 837
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +++ L K+ K+ +A I +M G++P +V Y ++ G Q D A +F E+L
Sbjct: 436 YNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML 495
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P++ TY+V ++G K+ + E + M P T N ++ LCK +
Sbjct: 496 EKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTS 555
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ +K++ +G + TY+ +IDG +G + A + E G+ + I
Sbjct: 556 ESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLI 615
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
G C+ + AL+++ +M +K + V+ AL+ K D VN S
Sbjct: 616 NGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNAS 663
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 142 IPKFR-INRVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKK 199
I FR + + A+ + MIN+G D + + ++S + E + L + EL EM
Sbjct: 685 ISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYA---EMLA 741
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G ++ Y+ +I L K ++ +A IL M + P + Y ++ G + + +
Sbjct: 742 KGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQE 801
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
A L +E+L GLVPD TY++ +NG K N+ +G
Sbjct: 802 AFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSG 837
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 171/400 (42%), Gaps = 21/400 (5%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
+S +LH+ N P Y +I L +N + + V + ++ R + ++ +I
Sbjct: 282 MSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDR-GYAPDRVMYTTMI 340
Query: 124 KTYADAHRFQDSVNLFYKI-----------------PKFRINRVGFAIEILNCMINDGFC 166
+ F ++ L++++ + A E+ N M N G+
Sbjct: 341 HGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYG 400
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
TC+ I+S +C + SDE ++M + G + Y ++IR K+ KV + +
Sbjct: 401 TTTVTCNKIISELCSRG--KSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERM 458
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+LN++ + +P + Y +++ D+ A+ L ++ GL P+ YTY+ ++G
Sbjct: 459 NLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGS 518
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
K + E ++ G T N ++ LC + + E+ K+M GI +
Sbjct: 519 LKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADA 578
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +I G +G + ++ LL E + +GL +S + I LCQ G A L
Sbjct: 579 ITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGD 638
Query: 407 MADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
M K + P A + E L+S + K RL+ + N
Sbjct: 639 MVSKGIEPHANLREH-LISGLCKQGRATEGMDRLMGMLEN 677
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 7/279 (2%)
Query: 150 VGF---AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
VGF AIE+ + G + C+ ILS + ++ L F QEM K G
Sbjct: 169 VGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAG--KTELLFEFYQEMIKAGTASDA 226
Query: 207 VDYT--NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
T +I++ +V +LNQ G+ P Y ++ G ++Y E+
Sbjct: 227 NTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVL 286
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ +P +YTY INGLCK ++ +++ G PD + Y T++ LC++
Sbjct: 287 HTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEM 346
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R+L EM KG+ N TY+ M+ G GD AC L E NKG T +
Sbjct: 347 GSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTC 406
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I LC RG +A E+ K+M++ + A + +L+
Sbjct: 407 NKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLI 445
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 4/286 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-DELLGFVQEMKKLGFCFGM 206
+V E+LN + G T + +++ C+ ++ +S E+L + L +
Sbjct: 242 GQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIY-- 299
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y +I L K E+ +A + N +K G PD V YT +++G+ + +A +L+ E
Sbjct: 300 -TYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFE 358
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G+ P+ YTYN ++G K + E ++ M G +T N ++ LC +
Sbjct: 359 MMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGK 418
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ E+ K+M GI + TY+ +I G +G + E LL E + + S+++
Sbjct: 419 SDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYEL 478
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
I C+ G A LL M+ K + P A ++ +L S+ DF
Sbjct: 479 LIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDF 524
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV-- 281
+A+ + Q+K GI+ IV +L+G + E + E++ G D T V
Sbjct: 174 EAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGC 233
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I C V G +++ + G P TYN L+ C+ + + E++ M +
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ + TY +I+GL + +EA + + ++G M+ I GLC+ G +A
Sbjct: 294 HLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEAR 353
Query: 402 ELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+L +M DK + P A + +L S+ DF
Sbjct: 354 KLWFEMMDKGMQPNAYTYNTMLHGSLKSGDF 384
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
E+ N N G+ TC+ I+S +C + SDE ++M + G + Y ++IR
Sbjct: 529 ELYNETCNKGYGTTTATCNKIISELCSRG--KSDEASEMFKKMSETGIKADAITYNSLIR 586
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
K+ KV ++ +LN++ + G++P Y ++ + D A+ L+ +++ G+ P
Sbjct: 587 GFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEP 646
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
I+GLCKQ G+ + M E KP + L + L
Sbjct: 647 HANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECL 693
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 5/187 (2%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD + M+ ++ + A+ + D + G +PD + Y+ LC +E I++
Sbjct: 122 PDPISSNMLFEALLDAKAVRAAKMVRD---IAGFIPDSASLEQYVKCLCGVGFIEEAIEV 178
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV--LNLQTYSIMIDGL 356
++E G + ++ N++L K + L E +EM G N +T +I
Sbjct: 179 YFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAF 238
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G + LL + L GL + +++ I G CQ E+L M ++ P
Sbjct: 239 CDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTI 298
Query: 417 RVWEALL 423
++ ++
Sbjct: 299 YTYQEII 305
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 132/256 (51%), Gaps = 5/256 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE---KVFDALG 227
T ++ ++ +C+ L+ E ++++K GF +V Y +I KK K++ A
Sbjct: 202 TFNIFINGLCKAGKLNKAE--DVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADA 259
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
IL +M ++ I P+ + + +++G E+ + A+ F+E+ GL P++ TYN INGL
Sbjct: 260 ILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLS 319
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
++ I + M LG KP+++T+N L+ CK + + R+L ++ + +V N
Sbjct: 320 NNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAI 379
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
T++ MID G + E L L++G+ S ++ I GLC+ VR A +LL +M
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439
Query: 408 ADKDVSPGARVWEALL 423
+ ++ + L+
Sbjct: 440 ENYELKADVVTYNILI 455
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 149/296 (50%), Gaps = 4/296 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A IL M+ + C + T + ++ C+ ++ + + +EM++ G +V Y ++
Sbjct: 257 ADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAK--NAFEEMQRQGLKPNIVTYNSL 314
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K+ +A+ + ++M G+KP+IV + ++NG ++ +A +LFD++ L
Sbjct: 315 INGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDL 374
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VP+ T+N I+ CK +E G + M + G P+V TYN L+ LC+ + + ++
Sbjct: 375 VPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKK 434
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ EM+ + ++ TY+I+I G G+ +A LL E LN G+ ++ + G C
Sbjct: 435 LLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYC 494
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILN 446
G ++ AL++ QM + + L+ KL+ N ++++ LN
Sbjct: 495 MEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLN 550
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 133/253 (52%), Gaps = 6/253 (2%)
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
L+L+ V S+ E+ VQ+ GF + ++ +LVK + + + +M
Sbjct: 136 LVLAYVTNLEIHSACEVFRRVQD---YGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMI 192
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
I+P++ + + +NG+ KAE++ +++ G P++ TYN I+G CK+ +
Sbjct: 193 KRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAG 252
Query: 294 AGIKMIACMEELGSK---PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ A ++E+ + P+ IT+NTL+ CK + + +EM+ +G+ N+ TY+
Sbjct: 253 KMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYN 312
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I+GL++ G + EA L ++ + GL F+ I G C++ ++++A +L +A++
Sbjct: 313 SLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQ 372
Query: 411 DVSPGARVWEALL 423
D+ P A + ++
Sbjct: 373 DLVPNAITFNTMI 385
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 91/161 (56%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L + + V A +LN+M++ +K D+V Y +++ G + KAE+L E+L
Sbjct: 416 YNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEML 475
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+G+ P+ TYN ++G C + N++A +K+ ME+ G + +V+TYN L++ CK +L
Sbjct: 476 NVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLE 535
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
L+ EM KG+ N TY ++ + KG I + G L
Sbjct: 536 DANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHL 576
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 95/191 (49%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ + +I + K + + + N M +GI P++ Y ++ G+ ++ A++L +E
Sbjct: 379 ITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNE 438
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ L DV TYN+ I G CK K++ M +G KP+ +TYNTL+ C
Sbjct: 439 MENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGN 498
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L ++ +M+ +G N+ TY+++I G G + +A LL E L KGL + +D
Sbjct: 499 LKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDV 558
Query: 387 TICGLCQRGLV 397
+ ++G +
Sbjct: 559 VRLEMLEKGFI 569
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A I MI G D +L++ + C+ ++ D + + M+K + +
Sbjct: 480 AFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNM--DRAIRIFERMQKERMQPSNRTFRPI 537
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + A L+ M+ G P ++ Y +++G++ + KA + D++ + G+
Sbjct: 538 IEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGI 597
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +TY + + G ++ + ++E G K DV Y TLL+A CK +
Sbjct: 598 APNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALA 657
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +EM ++ I N Y+I+IDG A +GD+ EA LL++ G+ F I C
Sbjct: 658 VTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACC 717
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G +++A ++++MAD + P + + L+
Sbjct: 718 KAGDMQRAENVIQEMADVGLKPNVKTFTTLI 748
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 35/249 (14%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ +K+ GF ++ Y +I VK KV A+ I +M+S GIK + Y+M++NG I
Sbjct: 415 ERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHL 474
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE---------- 304
D+ A +F++++ GL PD YN+ + CK N++ I++ M++
Sbjct: 475 HDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTF 534
Query: 305 -------------------------LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
G P V+TYN L+ L + ++ + ++ +M
Sbjct: 535 RPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSI 594
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
GI N TY+I++ G A+ GDI +A + GL +++ + C+ G ++
Sbjct: 595 AGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQS 654
Query: 400 ALELLKQMA 408
AL + ++M+
Sbjct: 655 ALAVTREMS 663
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M++ G ++ Y +I LV+K +V A+ +L++M GI P+ YT+++ G D
Sbjct: 557 MRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGD 616
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA E F ++ GL DVY Y + CK +++ + + M + YN
Sbjct: 617 IGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNI 676
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ + ++ +L+K+MK GI N+ T++ I+ GD+ A +++E + G
Sbjct: 677 LIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVG 736
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
L F I G + L +AL+ ++M + P + L+ S +S+ + S
Sbjct: 737 LKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGS 796
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 109/220 (49%), Gaps = 2/220 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++V A+ +L+ M G + T ++I+ D+ + + ++K+ G
Sbjct: 578 RKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIG--KAFEYFTKIKESGLKLD 635
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++R+ K ++ AL + +M I + Y ++++G + D +A +L
Sbjct: 636 VYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLK 695
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+++T+ YIN CK +++ +I M ++G KP+V T+ TL++ +V
Sbjct: 696 QMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVS 755
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+R + +EMK G+ + Y ++ L S+ ++E
Sbjct: 756 LPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEG 795
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 151/338 (44%), Gaps = 26/338 (7%)
Query: 98 DISSVLDHIE--KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
D+ L +E K E E + LI Y + Q + NLF K K +++ +
Sbjct: 301 DMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLF-KEAKTKLDNL----- 354
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR- 214
+G S I+ + C+ ++ E L V+EM++ G + Y +++
Sbjct: 355 ------------NGIIYSNIIHAHCQSGNMDRAEEL--VREMEEDGIDAPIDVYHSMMHG 400
Query: 215 -SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
++V+ EK L + ++K G KP I+ Y ++N + KA + E+ G+
Sbjct: 401 YTVVQDEK--KCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIK 458
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
+ TY++ ING ++ + M + G +PD YN L++A CK+ ++R +
Sbjct: 459 HNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRI 518
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ M+ + + + +T+ +I+G A GD+ A L+ G ++ I GL +
Sbjct: 519 FERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVR 578
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+ V KA+ +L +M+ ++P + ++ + D
Sbjct: 579 KHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGD 616
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 119/253 (47%), Gaps = 2/253 (0%)
Query: 173 SLILSSVCEQRDLSSD--ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+ + +S+ ++ D L V+EMK G +V Y+ +I K A +
Sbjct: 286 AFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFK 345
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ K+ + + Y+ +++ + +AEEL E+ G+ + Y+ ++G
Sbjct: 346 EAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQ 405
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + + + ++E G KP +I+Y L+ KV ++ + + KEM+ GI N +TYS
Sbjct: 406 DEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYS 465
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++I+G D A + E+ + GL ++++ + C+ G + +A+ + ++M +
Sbjct: 466 MLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKE 525
Query: 411 DVSPGARVWEALL 423
+ P R + ++
Sbjct: 526 RMQPSNRTFRPII 538
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%)
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K+ A M++ GI+P+ +T +++ V D A +E+ G+ V
Sbjct: 262 AKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTV 321
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
TY++ I+G K N+ ++ + + + I Y+ ++ A C+ ++R ELV+E
Sbjct: 322 VTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVRE 381
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M+ GI + Y M+ G D + + E G + I + G
Sbjct: 382 MEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGK 441
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
V KA+ + K+M + + + L+ + DF N
Sbjct: 442 VPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANA 480
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 135/267 (50%), Gaps = 8/267 (2%)
Query: 153 AIEILNCMIN-DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A EIL M+ DG D T + ++ +C RD D V+EMK G ++
Sbjct: 64 ACEILREMVTRDGMAPDVVTYTSVVDGLC--RDGKMDRACEMVREMKLKGVEPDKFTFSA 121
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL- 270
+I KV +AL + ++ + + D V + ++ G+ + +A ELF E+ +
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181
Query: 271 --GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
PDV TY I+G CK N+E +KM+ ME P+V+TY++LL LCK +L+
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 241
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDET 387
+ +L + M KG V N+ TY+ +I GL + ++A LL + + C ++ ++
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCA-AHKVDAARLLMDEMTATCCPADTVSYNAL 300
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
+ G C+ G + +A +L K+MA K P
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLP 327
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 183/438 (41%), Gaps = 64/438 (14%)
Query: 27 AKWHQTLDQQQAKQNVKQSLTTPPTK-----QQQQIPKQPHILSSLLHSFSIYNCEPPPE 81
+K ++ L + + ++V L T T +Q ++ + IL ++ + P
Sbjct: 26 SKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGM---APDVV 82
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y V+ L + + D + + K + E +F F LI + +A + +++ L+ +
Sbjct: 83 TYTSVVDGLCRDGKM-DRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKE 141
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
I + +D + S +++ +C +R + L EM++ G
Sbjct: 142 I------------------LTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDG 183
Query: 202 -FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
+ +V YT +I K + A+ +L M+ P++V Y+ +L+G+ D +A
Sbjct: 184 AWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 243
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+LF + G VP+V TY I+GLC + V+A ++ M D ++YN LL
Sbjct: 244 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDG 303
Query: 321 LCKVRELNRLRELVKEMKWK------------------------------------GIVL 344
C++ + ++L KEM K GI
Sbjct: 304 YCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 363
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
++ TYSI++ G + +EA ++E + + + + + I GLC+ G V A+E+L
Sbjct: 364 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVL 423
Query: 405 KQMADKDVSPGARVWEAL 422
K + DV V E L
Sbjct: 424 KNVDKPDVVTYTIVIEGL 441
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 17/247 (6%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y V+ L K A +L +M+ DG + PD+V Y+ V+NG Q + +A E+ E
Sbjct: 12 YNVVVNGLCKARLTSKAYEVLKEMR-DGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 267 LLVL-GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ PDV TY ++GLC+ ++ +M+ M+ G +PD T++ L+ C R
Sbjct: 71 MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE-------ALNKGLC 378
+++ +L KE+ L+ + S +I GL + I EA L +E A +
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTS 436
T +++ D G C+ G + KA+++L M + P + +LL L LD
Sbjct: 191 TYTALID----GFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246
Query: 437 FIRLVDQ 443
F R+ +
Sbjct: 247 FRRMTSK 253
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ YT ++R ++ +A +L MK+ GI PD+V Y++V+ G + +V+A E
Sbjct: 330 ITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQ 389
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ + P+ TY+ I+GLCK V ++++ ++ KPDV+TY +++ LC
Sbjct: 390 EMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTD 445
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL----EEALNKGLCTQS 381
L++EM K + ++ T++ +I L GD+ EA LL L G+ T +
Sbjct: 446 RTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 505
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADK 410
++ + G + G + A EL + M K
Sbjct: 506 TLLE----GFSRTGRMEIAYELFEVMRRK 530
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 11/186 (5%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F+QEM V Y+++I L K +V A+ +L + KPD+V YT+V+ G+
Sbjct: 387 FIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLC 442
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ +A L +E++ + P V T+N I LC+ +++ K++ M G +P ++
Sbjct: 443 GTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMV 502
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKG----IVLNL---QTYSIMIDGLASKGDIIEA 365
TY TLL+ + + EL + M+ K NL Q +S +I GL +I +A
Sbjct: 503 TYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKA 562
Query: 366 CGLLEE 371
++EE
Sbjct: 563 MAVVEE 568
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITYNTLLQALCKVRELNRL 330
+ P+ TYNV +NGLCK +++ M + S PD++TY+T++ CK E++R
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 331 RELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
E+++EM + G+ ++ TY+ ++DGL G + AC ++ E KG+ F I
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
G C V +AL+L K+ +L+S +LD V++S +
Sbjct: 125 GWCNARKVDEALKLYKE----------------ILTSSCRLDAVSSSAL 157
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 114/218 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ K G +V + ++ +K + + + N M++ G++PD+ Y++++NG+ +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESK 221
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A ELFDE+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNT
Sbjct: 222 MDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK +L + ++L EM KG+ + TY+ +IDG +G + A + + +
Sbjct: 282 LIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKEN 341
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ + I GLCQ G A ++L++M + P
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +J
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVJ 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + + G
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L +E KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ + M G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NXMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + G +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ TYS++I+GL + + +A L +E L+ GL
Sbjct: 183 KLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A + ++M G+KPD + YT +++G + A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G V ++ T
Sbjct: 403 LLKEMQRDGYVPSVVT 418
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 159/355 (44%), Gaps = 25/355 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S NC+P Y +I +L ++ Q ++ + + F + LI
Sbjct: 186 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEM-IHQGISPSIFTYNSLIHAL 244
Query: 127 ADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ ++ L ++ +I N V F+ + D C +GK V E D
Sbjct: 245 CNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV------DALCKEGK--------VMEAHD 290
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ V M K G +V Y ++ + ++ +A+ + + M G PD+V Y
Sbjct: 291 V--------VDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 342
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+ ++NG + KA LF+E+ L+P+ TY+ ++GLC ++ I + M
Sbjct: 343 STLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 402
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD ++Y LL LCK R L+ L+K ++ + ++Q Y+I+IDG+ G++
Sbjct: 403 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 462
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
A L +KGL + I GLCQ+GL+ +A +L +M K SP +
Sbjct: 463 ARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 517
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L S+ + + S+ +L +M G + +I S +++ A +L ++
Sbjct: 65 LLISITKMKHYST--VLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILK 122
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +P+I + ++ G+ V+ + LFD+++ G P+V TY INGLCK + A
Sbjct: 123 LGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSA 182
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
I+++ ME+ +PDV+ Y +++ +LCK R++ + L EM +GI ++ TY+ +I
Sbjct: 183 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 242
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + + LL E +N + +F + LC+ G V +A +++ M + V P
Sbjct: 243 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302
Query: 415 GARVWEALL 423
+ AL+
Sbjct: 303 NVVTYNALM 311
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 168/371 (45%), Gaps = 23/371 (6%)
Query: 64 LSSLLHSFS-IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI-- 120
L L SF+ + + PPP F K L ++ S+VL + ++F P I+
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFT-KLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLN 98
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMIND 163
LI ++ R + ++ KI K ++G + + + MI +
Sbjct: 99 ILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 158
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF + T +++ +C+ S+ + ++ M++ +V YT++I SL K +V
Sbjct: 159 GFQPNVVTYGTLINGLCKVG--STSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 216
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A + ++M GI P I Y +++ + ++ L +E++ ++P+V ++ +
Sbjct: 217 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 276
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ LCK+ V ++ M + G +P+V+TYN L+ C E++ ++ M KG
Sbjct: 277 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 336
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ +YS +I+G I +A L EE K L + + + GLC G ++ A+ L
Sbjct: 337 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 396
Query: 404 LKQMADKDVSP 414
+M + P
Sbjct: 397 FHEMVTRGQIP 407
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ D+T ++ S+ K + L + +QM S GI P+I +++N + A +
Sbjct: 59 IADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLA 118
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++L LG P++ T+N I GLC + + + + M G +P+V+TY TL+ LCKV
Sbjct: 119 KILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVG 178
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L++ M+ ++ Y+ +ID L + +A L E +++G+ ++
Sbjct: 179 STSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYN 238
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC + LL +M + + P ++ ++
Sbjct: 239 SLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 276
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 2/201 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL N+M P I +T +L + + Y L ++ G+ P++YT N+ I
Sbjct: 42 DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 101
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N C + ++A + +LG +P++ T+NTL++ LC ++ + L +M +G
Sbjct: 102 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 161
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFDETICGLCQRGLVRKALE 402
N+ TY +I+GL G A LL ++ +G C ++ I LC+ V +A
Sbjct: 162 PNVVTYGTLINGLCKVGSTSAAIRLL-RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFN 220
Query: 403 LLKQMADKDVSPGARVWEALL 423
L +M + +SP + +L+
Sbjct: 221 LFSEMIHQGISPSIFTYNSLI 241
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 155/330 (46%), Gaps = 27/330 (8%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV-------- 150
+E + + ++F LI Y ++ +D++ + +++P +V
Sbjct: 56 LETKGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 115
Query: 151 ------GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
GF E L C G+ ++++ S ++ ++ + + K G
Sbjct: 116 YFKLVWGFYEENLEC----GYPASLYFFNILMHSFVKEGEIRLAQ--SVFDAITKWGLRP 169
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V + ++ +K + + + N M++ G++PD+ Y++++NG+ + A LF
Sbjct: 170 SVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLF 229
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 230 DEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 289
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 290 GDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + P
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA + ++M G+ P+ V +T +++G A E++ ++L
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L PD+ TYN I GLCK+ +++ +I M G KPD TY TL+ CK +L
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E L+ GL + + I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
C++G V +LLK+M P
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYKP 414
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + +L EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKMDDANVL--FDEMLDKGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+++
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD +TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + G +P V+++NTL+
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +LN L M+ G+ ++ TYS++I+GL + + +A L +E L+KGL
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M++ D T + ++ +C++ DL + L + EM G
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL--IDEMIMKGLKPDKF 312
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + I+ D V YT +++G+ + V AE++ E+
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L +GL P++ TY + IN CK+ +V G K++ M+ G KP V+T
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 134/267 (50%), Gaps = 2/267 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A + M+ G D T S ++ +C RD E +EM K+G
Sbjct: 271 KMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLC--RDGRFSEAYALFREMDKIGVAPN 328
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y I SL K ++V ++LG+L +M S G+ D+V YT V++ + + +A+++
Sbjct: 329 HVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLR 388
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L + P+ TY V ++ C+ N++ +M+ MEE P+V+T++++L L K
Sbjct: 389 HALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRG 448
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + +++MK GI N+ TY +IDG A + + L++G+ + + D
Sbjct: 449 CIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVD 508
Query: 386 ETICGLCQRGLVRKALELLKQMADKDV 412
+ GL + G + +A L K M ++ +
Sbjct: 509 SLVNGLRKNGNIEEAEALFKDMGERGL 535
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 137/282 (48%), Gaps = 8/282 (2%)
Query: 146 RINRVGFAIEILNCMIN----DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
R VG A + ++ DG V G ++ C+ +D+++ L V+ M G
Sbjct: 164 RTGLVGEAAALAEMLVRGRGIDGLGVVGWNA--LIDGYCKVQDMAAA--LAVVERMTTQG 219
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V Y ++ A + +MK+DG++P +V +T ++ + +A
Sbjct: 220 LSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAF 279
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
L++ ++ G++PDV T + ++GLC+ + M+++G P+ +TY T + +L
Sbjct: 280 TLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSL 339
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
KV+ +N L+ EM +G+ ++L Y+ ++D L +G I EA +L AL+ +
Sbjct: 340 AKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNC 399
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + C+ G + A ++L QM +K VSP + ++L
Sbjct: 400 VTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSIL 441
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 197/470 (41%), Gaps = 51/470 (10%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
+V+ + +A ++RK + ++P + +D Q + +L + +
Sbjct: 444 LVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEAN 503
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCD---ISSVLDHIEKRENFETPEF 117
I+ SL++ EA + K + E D ++++D + K N
Sbjct: 504 NFIVDSLVNGLRKNGNIEEAEA---LFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALK 560
Query: 118 IFIDLIKT--YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
+ +L++ DA + +N ++ KF A L M N G D T + +
Sbjct: 561 VGQELMERNLSPDAVVYNVFINCLCRLGKFS-----EAKSFLKEMRNTGLEPDQATYNTM 615
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+S+ C R+ ++ + L + EMK ++ YT ++ L++ V A +LN+M S
Sbjct: 616 ISAQC--REGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASA 673
Query: 236 GIKPDIVCYTMVLN-------------------GVIVQEDYV----------------KA 260
G P + Y VL G + D KA
Sbjct: 674 GFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKA 733
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ DE+L G+ PD T+N I G CK ++++ A M G P++ T+NTLL
Sbjct: 734 TIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGG 793
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L + ++ EMK G+ N TY I++ G A K + +EA L E ++KG +
Sbjct: 794 LESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPK 853
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
+S ++ I + G++ +A EL +M + V + ++ +LL+ SKL
Sbjct: 854 ASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYD-ILLNGWSKL 902
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 137/296 (46%), Gaps = 4/296 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ M+++G + +++ + + ++ E L ++M + G V+Y +
Sbjct: 488 ALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEAL--FKDMGERGLLLDHVNYATL 545
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + AL + ++ + PD V Y + +N + + +A+ E+ GL
Sbjct: 546 MDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGL 605
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TYN I+ C++ N +K++ M+ KP++ITY TL+ L + + + +
Sbjct: 606 EPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKY 665
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ EM G TY ++ + + E + GL ++++ + LC
Sbjct: 666 LLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLC 725
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS--SVSKLDFVNTSFIRLVDQILN 446
G+ RKA +L +M + ++P + AL+L S LD ++ +++ Q L+
Sbjct: 726 CHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLS 781
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 131/273 (47%), Gaps = 2/273 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L ++D + T ++++ + C ++ E + + +M++ +V ++++
Sbjct: 383 AKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQM--LLQMEEKSVSPNVVTFSSI 440
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ LVK+ + A G + +MK GI P++V Y +++G + A +++ ++L G+
Sbjct: 441 LNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGV 500
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ + + +NGL K N+E + M E G D + Y TL+ L K + +
Sbjct: 501 EANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALK 560
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +E+ + + + Y++ I+ L G EA L+E N GL + ++ I C
Sbjct: 561 VGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQC 620
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G KAL+LL +M + P + L++
Sbjct: 621 REGNTSKALKLLNEMKWSSIKPNLITYTTLVVG 653
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ EM G + + +I K + +A QM G+ P+I + +L G+
Sbjct: 737 LDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLES 796
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+A+ + E+ +GL P+ TY++ + G K++N +++ M G P T
Sbjct: 797 AGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAST 856
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN+L+ K +N+ +EL EMK +G++ TY I+++G + + E LL++
Sbjct: 857 YNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMK 916
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G + G+ +A LLK +
Sbjct: 917 ELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 159/355 (44%), Gaps = 25/355 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S NC+P Y +I +L ++ Q ++ + + F + LI
Sbjct: 195 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEM-IHQGISPSIFTYNSLIHAL 253
Query: 127 ADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ ++ L ++ +I N V F+ + D C +GK V E D
Sbjct: 254 CNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV------DALCKEGK--------VMEAHD 299
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ V M K G +V Y ++ + ++ +A+ + + M G PD+V Y
Sbjct: 300 V--------VDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSY 351
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+ ++NG + KA LF+E+ L+P+ TY+ ++GLC ++ I + M
Sbjct: 352 STLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVT 411
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD ++Y LL LCK R L+ L+K ++ + ++Q Y+I+IDG+ G++
Sbjct: 412 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 471
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
A L +KGL + I GLCQ+GL+ +A +L +M K SP +
Sbjct: 472 ARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 526
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L S+ + + S+ +L +M G + +I S +++ A +L ++
Sbjct: 74 LLISITKMKHYST--VLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILK 131
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +P+I + ++ G+ V+ + LFD+++ G P+V TY INGLCK + A
Sbjct: 132 LGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSA 191
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
I+++ ME+ +PDV+ Y +++ +LCK R++ + L EM +GI ++ TY+ +I
Sbjct: 192 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 251
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + + LL E +N + +F + LC+ G V +A +++ M + V P
Sbjct: 252 ALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311
Query: 415 GARVWEALL 423
+ AL+
Sbjct: 312 NVVTYNALM 320
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 168/371 (45%), Gaps = 23/371 (6%)
Query: 64 LSSLLHSFS-IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI-- 120
L L SF+ + + PPP F K L ++ S+VL + ++F P I+
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFT-KLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLN 107
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMIND 163
LI ++ R + ++ KI K ++G + + + MI +
Sbjct: 108 ILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 167
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF + T +++ +C+ S+ + ++ M++ +V YT++I SL K +V
Sbjct: 168 GFQPNVVTYGTLINGLCKVG--STSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 225
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A + ++M GI P I Y +++ + ++ L +E++ ++P+V ++ +
Sbjct: 226 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 285
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ LCK+ V ++ M + G +P+V+TYN L+ C E++ ++ M KG
Sbjct: 286 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 345
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ +YS +I+G I +A L EE K L + + + GLC G ++ A+ L
Sbjct: 346 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 405
Query: 404 LKQMADKDVSP 414
+M + P
Sbjct: 406 FHEMVTRGQIP 416
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ D+T ++ S+ K + L + +QM S GI P+I +++N + A +
Sbjct: 68 IADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLA 127
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++L LG P++ T+N I GLC + + + + M G +P+V+TY TL+ LCKV
Sbjct: 128 KILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVG 187
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L++ M+ ++ Y+ +ID L + +A L E +++G+ ++
Sbjct: 188 STSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYN 247
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC + LL +M + + P ++ ++
Sbjct: 248 SLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 285
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 2/201 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL N+M P I +T +L + + Y L ++ G+ P++YT N+ I
Sbjct: 51 DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 110
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N C + ++A + +LG +P++ T+NTL++ LC ++ + L +M +G
Sbjct: 111 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQ 170
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFDETICGLCQRGLVRKALE 402
N+ TY +I+GL G A LL ++ +G C ++ I LC+ V +A
Sbjct: 171 PNVVTYGTLINGLCKVGSTSAAIRLL-RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFN 229
Query: 403 LLKQMADKDVSPGARVWEALL 423
L +M + +SP + +L+
Sbjct: 230 LFSEMIHQGISPSIFTYNSLI 250
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 4/267 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +I MI G + T + +L+ +C + D + + M + G ++ Y +
Sbjct: 203 AYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQM--DHAVRLFEVMVERGIKIDVISYNTL 260
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K +A+ + +M+ + + P I YT++L + A+ELF+ + + G
Sbjct: 261 INGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQ 320
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P + TY V ++GLCK +E I + ++ + KP + Y+ L+ + + R E
Sbjct: 321 SPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAME 380
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGL 391
+ E+ G+V N+ TY+IMI+GL +G ++EA L + G C Q + F+ I G
Sbjct: 381 IFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESG-CEQDEISFNFIIRGF 439
Query: 392 CQRGLVRKALELLKQMADKDVSPGARV 418
Q V+KA+E LK+M +K+ SP V
Sbjct: 440 LQENQVQKAMEFLKRMREKNFSPNDSV 466
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 11/279 (3%)
Query: 151 GFAIEILNC---MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
G AI+ L MIN G C + S +++ +C L E + EM G ++
Sbjct: 93 GLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLR--EAVNLFDEMVSQGIKANVI 150
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++I + + +A +QM +GI PD+V +T +++ + + +A ++F+ +
Sbjct: 151 TYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELM 210
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G P++ TYN +NGLC + ++ +++ M E G K DVI+YNTL+ C +
Sbjct: 211 IKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKT 270
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
L ++M+++ + ++ TY+I++ L G I A L N +C QS D
Sbjct: 271 EEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFN---NMQICGQSPSLDTY 327
Query: 388 IC---GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G + +A+++ + + P R++ L+
Sbjct: 328 TVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILI 366
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 148/294 (50%), Gaps = 4/294 (1%)
Query: 132 FQDSVNLF-YKIPKFRINRVGF-AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE 189
FQ + L+ Y I R R A+E+ M+++ + T L++ S+C +D + +
Sbjct: 40 FQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLC--KDGLAIK 97
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
L +EM +G C ++ Y+++I L + K+ +A+ + ++M S GIK +++ Y +++
Sbjct: 98 GLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIH 157
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
+ +A F +++ G++PDV T+ I+ L K+ V+ K+ M + G P
Sbjct: 158 ASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAP 217
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
+++TYN+LL LC +++ L + M +GI +++ +Y+ +I+G + G EA L
Sbjct: 218 NIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLF 277
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + L + + + L Q G +R A EL M SP + LL
Sbjct: 278 RKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLL 331
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%)
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
K G+ +V + +++ + + KV DAL + ++M G + DI+ Y ++N +
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A EL +L + +TY + I+ LCK G+KM M +G P+VI Y++L+
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LC+V +L L EM +GI N+ TY+ +I G EA + + +G+
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F I L ++G V++A ++ + M + +P + +LL
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLL 226
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 171 TCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T S ++ +C E + + + EL +M + GF ++ Y +I +L K + A+ +
Sbjct: 11 TVSTLVKGMCFEGKVMDALELF---DKMTRSGFQGDILLYGYLINALRKTRQARRAVELH 67
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+M S+ + Y +V++ + +K ++F E++ +G+ P+V Y+ INGLC+
Sbjct: 68 RRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRV 127
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ + + M G K +VITYN+L+ A C+ +M +GI+ ++ T+
Sbjct: 128 GKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTF 187
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ +ID L+ KG + EA + E + +G ++ + GLC + A+ L + M +
Sbjct: 188 TTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVE 247
Query: 410 KDV 412
+ +
Sbjct: 248 RGI 250
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G P++ T + + G+C + V +++ M G + D++ Y L+ AL K R+ R
Sbjct: 4 GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL + M + N TY ++ID L G I+ + E +N G+C ++ I G
Sbjct: 64 VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
LC+ G +R+A+ L +M + + + +L+ +S
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHAS 159
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 112/209 (53%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +K + + + N M++ G++PD+ Y++++NG+ + A ELFD
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L LVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 231 EMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYT 350
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + P
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 160/344 (46%), Gaps = 20/344 (5%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
PEA + ++ + S +E + + ++F LI Y ++ +D++
Sbjct: 30 PEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIEC- 88
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
Y++ K RV F TC +L + + + + GF +E +
Sbjct: 89 YRLTKEHKFRVPF-----------------DTCRKVLEHLMKLKYFKL--VWGFYEESLE 129
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G+ + + ++ S VK+ ++ A + + + ++P +V + ++NG I D +
Sbjct: 130 CGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDE 189
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
L + + G+ PDVYTY+V INGLCK++ ++ ++ M + P+ +T+ TL+
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLID 249
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
CK ++ E+ K+M + + +L TY+ +I GL KGD+ +A L++E KGL
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G C+ G + A + K+M +++ + AL+
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALI 353
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 112/227 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K+ K+ DA + ++M + + P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ +I M G
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L + K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V +LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNXLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E K M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ TYS++I+GL + + +A L +E L+ L
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++ +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A + ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G + ++ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 133/275 (48%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A+++ N M+ G D TC ++ C +L D L +M +LGF +
Sbjct: 247 RVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEEL--DMALEMTGDMARLGFVPSEAN 304
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++ L KK +V +A + Q+ + P+I Y +LN + + +A+ L +E+
Sbjct: 305 CSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMS 364
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P+ TY + I+ LCK+ ++ + M+ M E G + V YN+L+ CK +L+
Sbjct: 365 DKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLD 424
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ EM G+ N +YS +I GL KGD+ A L + KG+ + F I
Sbjct: 425 MAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALI 484
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ + +A L +M + ++ P + A++
Sbjct: 485 NGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVI 519
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 149/338 (44%), Gaps = 41/338 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I + A + + M++ G +D + + + CE R+L D G V M+ G
Sbjct: 174 KIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL--DGAKGLVARMQDEGDKVS 231
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD-IVCYTMVLNGVIVQEDYVKAEELF 264
V Y +I L K ++V +A+ + N M + G+ D + C T+V G E+ A E+
Sbjct: 232 AVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVY-GFCRTEELDMALEMT 290
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ LG VP + ++GL K+ VE ++ + EL P++ YN LL +CK
Sbjct: 291 GDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKN 350
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG------------------------ 360
+ LV EM KG+ N TY+I+I L +G
Sbjct: 351 GMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPY 410
Query: 361 -----------DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
D+ A G L E + GL ++ + I GLC++G + A+EL ++MA+
Sbjct: 411 NSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAE 470
Query: 410 KDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
K V+ + AL+ K+D + F ++ + L
Sbjct: 471 KGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNL 508
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 116/235 (49%), Gaps = 2/235 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L+++C+ S + L V EM G V Y +I SL K+ + DAL +L++M+
Sbjct: 343 LLNNMCKNGMFSEADRL--VNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMRE 400
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G++ + Y ++N ++D A E++ +GL P+ +Y+ I GLC++ ++
Sbjct: 401 KGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSG 460
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+++ M E G + T+ L+ CK ++++ L +M + N T++ +I+
Sbjct: 461 AVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIE 520
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
G GDI +A L ++ + +GL + + I GLC KA E + + +
Sbjct: 521 GYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLEN 575
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ L+ M+ G + + S +++ +C + DLS L ++M + G + +T +
Sbjct: 426 AMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELH--RKMAEKGVAWNTYTFTAL 483
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K +K+ +A + N+M ++P+ V + V+ G + D KA +L+D+++ GL
Sbjct: 484 INGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGL 543
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD YTY I+GLC + + +A +E S + + LL C+ L
Sbjct: 544 TPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYH 603
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM G L+L +++I++ + D ++C L E KG+ + I
Sbjct: 604 VWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYS 663
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + +AL +M P + AL+
Sbjct: 664 KEGNMVQALNCWDEMIADGHLPNTVTYTALV 694
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 12/268 (4%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
NC + + F + + +L C + L+ E EM G ++ +T ++ + +
Sbjct: 576 NCSVLNKF-----SLTALLHGFCREGRLT--EAYHVWNEMAMWGGKLDLISFTIIVYAAL 628
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K+ + + +MK G++PD V +T ++N + + V+A +DE++ G +P+
Sbjct: 629 KQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTV 688
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSK--PDVITYNTLLQALCKVRELNRLRELVK 335
TY +N LCK ++ + + C E L S P+ T+N L L ++L
Sbjct: 689 TYTALVNNLCKSWHLSSA--ELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYF 746
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M +G + N+ + + +I G G I EA L+ + G + I LC++G
Sbjct: 747 AM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKG 805
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+ +A+EL +M K V P + L+
Sbjct: 806 DINEAIELWNEMLYKGVKPDIVAYNILI 833
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 142/318 (44%), Gaps = 26/318 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGF---------------AIEILNC 159
+ F LI + A + ++ LF K+ + + N V F A ++ +
Sbjct: 478 YTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQ 537
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G D T ++S +C S + FV +++ T ++ ++
Sbjct: 538 MMCRGLTPDNYTYRSLISGLCLTDGASKAK--EFVADLENNCSVLNKFSLTALLHGFCRE 595
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ +A + N+M G K D++ +T+++ + Q D K+ LF E+ G+ PD +
Sbjct: 596 GRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFH 655
Query: 280 NVYINGLCKQNNVEAGIKMIACMEEL---GSKPDVITYNTLLQALCKVRELNRLRELVKE 336
IN K+ N+ ++ + C +E+ G P+ +TY L+ LCK L+ L KE
Sbjct: 656 TCMINMYSKEGNM---VQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKE 712
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M + N T++ +D A++G+ +E L A+ +G + I G C+ G
Sbjct: 713 MLASHFLPNSYTFNCFLDYFATEGN-LETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQ 771
Query: 397 VRKALELLKQMADKDVSP 414
+++A++L+ + + P
Sbjct: 772 IQEAIDLISRSTENGFFP 789
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 36/266 (13%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ A + N M G +D + ++I+ + +Q D S++ +EMK+ G
Sbjct: 594 REGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHD--SEKSCVLFREMKEKGVRPD 651
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K+ + AL ++M +DG P+ V YT ++N + AE L
Sbjct: 652 NVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCK 711
Query: 266 ELLVLGLVPDVYTYNVY----------------------------------INGLCKQNN 291
E+L +P+ YT+N + I G CK
Sbjct: 712 EMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQ 771
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
++ I +I+ E G PD I+Y+T++ LCK ++N EL EM +KG+ ++ Y+I
Sbjct: 772 IQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNI 831
Query: 352 MIDGLASKGDIIEACGLLEEALNKGL 377
+I G+ + G+ + + KG+
Sbjct: 832 LIRWCNIHGESDKCLGIYIDMVKKGV 857
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 36/248 (14%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L+ S GI PD + +L ++ + A LFD +L G++ D Y Y I C
Sbjct: 149 VLHLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYC 208
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK------------------------ 323
+ N++ ++A M++ G K + YN L+ LCK
Sbjct: 209 EVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEV 268
Query: 324 -----------VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
EL+ E+ +M G V + S M+DGL KG + EA L +
Sbjct: 269 TCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQL 328
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ ++ + +C+ G+ +A L+ +M+DK + P V A+L+ S+ K
Sbjct: 329 GELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPN-EVTYAILIHSLCKRGM 387
Query: 433 VNTSFIRL 440
++ + L
Sbjct: 388 MDDALCML 395
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF + + + ++ C+ + E + + + GF + Y+ VI L KK +
Sbjct: 751 GFLANIVSVNTLIKGFCKVGQIQ--EAIDLISRSTENGFFPDCISYSTVIHELCKKGDIN 808
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A+ + N+M G+KPDIV Y +++ + + K ++ +++ G+ P+ +T+
Sbjct: 809 EAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALF 868
Query: 284 NG 285
G
Sbjct: 869 VG 870
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 173/384 (45%), Gaps = 35/384 (9%)
Query: 85 FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK 144
+IK + + + VL +EK + E+ + LI Y + D++ + +
Sbjct: 141 LLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRV-----R 195
Query: 145 FRINRVGFAIEILNC--MINDGFCVDGKT----------------------CSLILSSVC 180
+ +VG + + C +IN G+C +G+ C+L+ C
Sbjct: 196 DEMLKVGLKMNLFVCNSLIN-GYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLV-DGYC 253
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
RD S + +M + G +V Y +++ L + DAL + + M G+ P+
Sbjct: 254 --RDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPN 311
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
V Y +L+G+ D+ +A L+D++L G+ +Y +N INGLCK ++ +
Sbjct: 312 EVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFK 371
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
MEELG KPD ITY TL CKV + ++ ++M+ + I +++ Y+ +I GL +
Sbjct: 372 RMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSK 431
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
I + LL E +GL + I G C +G + KA +M K +P +
Sbjct: 432 KISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICS 491
Query: 421 ALL--LSSVSKLDFVNTSFIRLVD 442
++ L + ++D N ++VD
Sbjct: 492 KIVSSLYRLGRIDEANMLLQKMVD 515
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 134/323 (41%), Gaps = 73/323 (22%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
TC++++++ C+ + + + FV+EM+KLGF V Y +++ V + A G+L
Sbjct: 68 TCAIMVNAYCKAGKV--ERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLK 125
Query: 231 QMKSDGIKPDIVCYTMVL----------------------NGVIVQE--------DYVK- 259
M G+ + V T+++ +GV+V E Y K
Sbjct: 126 FMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKV 185
Query: 260 -----AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD---- 310
A + DE+L +GL +++ N ING CK V G +++ CM +L KPD
Sbjct: 186 GKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSY 245
Query: 311 -------------------------------VITYNTLLQALCKVRELNRLRELVKEMKW 339
V+TYNTLL+ LC+ + L M
Sbjct: 246 CTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQ 305
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ N Y ++DGL GD A L ++ L +G+ F+ I GLC+ G +
Sbjct: 306 RGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDG 365
Query: 400 ALELLKQMADKDVSPGARVWEAL 422
A E K+M + P + L
Sbjct: 366 AKETFKRMEELGCKPDGITYRTL 388
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I V +A + ++M + G+ P+I Y +LNG+ +A LFD+L
Sbjct: 595 YCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLH 654
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ GL+P+V TYN+ I+G CK + + + M + G P +ITY++L+ CK ++
Sbjct: 655 LKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVE 714
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+L+ EMK + + T+S +++G GD+
Sbjct: 715 EAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDV 748
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 142/343 (41%), Gaps = 37/343 (10%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSV 136
P E Y+ +I L + + + +L ++ R +P + + LI + D R +
Sbjct: 415 PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRG--LSPNVVTYGALIAGWCDQGRLDKAF 472
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+ +++ MI GF + CS I+SS+ R DE +Q+
Sbjct: 473 SAYFE------------------MIGKGFAPNVIICSKIVSSL--YRLGRIDEANMLLQK 512
Query: 197 MKKLGFCFG---MVDYTNV-IRSLVKKEKVFDALGILNQMKSDGIK---PDIVCYTMVLN 249
M + D+ N IR L D I + + IK P+ V Y + +
Sbjct: 513 MVDFDLVLDHRCLEDFQNADIRKL-------DCWKIADTLDESAIKFSLPNNVVYNIAMA 565
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ A F L PD +TY I+G V + M G P
Sbjct: 566 GLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVP 625
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
++ TYN LL LCK L+R R L ++ KG++ N+ TY+I+IDG G EA L
Sbjct: 626 NITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLR 685
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ L +G+ + I G C++ V +A++LL +M +V
Sbjct: 686 GKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNV 728
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y + L K KV DA + PD Y +++G +A L DE
Sbjct: 558 VVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDE 617
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ GLVP++ TYN +NGLCK ++ ++ + G P+V+TYN L+ CK
Sbjct: 618 MVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGS 677
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+L +M +GI ++ TYS +I+G + D+ EA LL E + + F +
Sbjct: 678 PREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSK 737
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
+ G Q G V+K +L M S G + + LS +S
Sbjct: 738 LVEGCIQHGDVKKMSKLHNMMHMACPSAGITSHKQMELSELS 779
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 124/279 (44%), Gaps = 2/279 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F ++ I++L M G + T +++ C+Q L D+ EM GF
Sbjct: 428 FTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRL--DKAFSAYFEMIGKGFAP 485
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ + ++ SL + ++ +A +L +M + D C N I + D K +
Sbjct: 486 NVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTL 545
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE + +P+ YN+ + GLCK V + + PD TY TL+
Sbjct: 546 DESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAA 605
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+N L EM KG+V N+ TY+ +++GL G + A L ++ KGL +
Sbjct: 606 GYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTY 665
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G C+ G R+AL+L +M + +SP + +L+
Sbjct: 666 NILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLI 704
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+++ +K V +AL + + M G KP + +L+ ++ + + A ++D++ L
Sbjct: 2 ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+VPDV+T + +N CK VE ++ + ME+LG + + ++YN+L+ + ++ +
Sbjct: 62 IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK-GLCTQSSMFDETICG 390
++K M KG++ N T +++I G + + EA +L E + G+ + I G
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181
Query: 391 LCQRGLVRKALELLKQM 407
C+ G + A+ + +M
Sbjct: 182 YCKVGKMGDAIRVRDEM 198
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+++ +LVK+ + + A+ + +QM+ I PD+ +++N +A E E+
Sbjct: 35 NSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEK 94
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
LG + +YN ++G ++E ++ M E G + +T L++ CK ++
Sbjct: 95 LGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEE 154
Query: 330 LRELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++++EM K G+V++ Y +IDG G + +A + +E L GL + + I
Sbjct: 155 AEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLI 214
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
G C+ G V + LL M D+ P + + L+ D +++ + DQ+L
Sbjct: 215 NGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCR--DGLSSKAFNVCDQML 269
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 2/202 (0%)
Query: 251 VIVQEDYVK-AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
V ++ VK A +FD + G P + + N ++ L K+ + + + M L P
Sbjct: 5 VYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVP 64
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DV T ++ A CK ++ R E V+EM+ G LN +Y+ ++DG S GDI A G+L
Sbjct: 65 DVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVL 124
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ KG+ I G C++ V +A ++L++M +D L+ K
Sbjct: 125 KFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCK 184
Query: 430 LDFVNTSFIRLVDQILNTPCKM 451
+ + + IR+ D++L KM
Sbjct: 185 VGKMGDA-IRVRDEMLKVGLKM 205
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 73/146 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E EM G + Y ++ L K + A + +++ G+ P++V Y ++
Sbjct: 609 NEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNIL 668
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G +A +L ++L G+ P + TY+ ING CKQ++VE +K++ M+
Sbjct: 669 IDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNV 728
Query: 308 KPDVITYNTLLQALCKVRELNRLREL 333
+ T++ L++ + ++ ++ +L
Sbjct: 729 DQTIATFSKLVEGCIQHGDVKKMSKL 754
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 149/370 (40%), Gaps = 23/370 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y+ ++K L + D + L H+ + E + L+ F ++
Sbjct: 274 EPTVVTYNTLLKGLCRFGDYKD-ALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRAL 332
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
L+ I IN+ +I N MIN G C G+ D +
Sbjct: 333 TLWDDILARGINK---SIYAFNTMIN-GLCKMGEM----------------DGAKETFKR 372
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M++LG + Y + K V +A I +M+ + I P I Y ++ G+ +
Sbjct: 373 MEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKK 432
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
K +L E+ GL P+V TY I G C Q ++ M G P+VI +
Sbjct: 433 ISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSK 492
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ +L ++ ++ L+++M +VL+ + + K D + L+E+ K
Sbjct: 493 IVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKF 552
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ +++ + GLC+ G V A ++ +P + L+ S +VN +
Sbjct: 553 SLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTY-CTLIHGFSAAGYVNEA 611
Query: 437 FIRLVDQILN 446
F L D+++N
Sbjct: 612 F-NLRDEMVN 620
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 15/259 (5%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQM-KSDGIKP-DIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ +++ V + +AL +L +M +S+G P D Y +V+ G+ A ++FDE
Sbjct: 161 WNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDE 220
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G+ P+ TYN I+G K ++EAG ++ M + G KP+V+TYN LL LC+
Sbjct: 221 MVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGR 280
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ R L+ EM ++ + TYSI+ DGL GD L E+L KG+ +
Sbjct: 281 MDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSI 340
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL---------LLSSVSKLDFVNTSF 437
+ GLC+ G V KA ++L+ + + P ++ L L + S + + +
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400
Query: 438 IR----LVDQILNTPCKME 452
IR + ++N CKME
Sbjct: 401 IRPDHITYNALINGLCKME 419
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 153/348 (43%), Gaps = 23/348 (6%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
PPP+A Y+ VI L + + D V D + R + + +I + +
Sbjct: 191 PPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDR-GVAPNQITYNTMIDGHVKGGDLE-- 247
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
GF + + M+ DG + T +++LS +C R DE +
Sbjct: 248 --------------AGFRLR--DQMLQDGRKPNVVTYNVLLSGLC--RAGRMDETRALMD 289
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM Y+ + L + L + + G+ +++LNG+
Sbjct: 290 EMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDG 349
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
KAE++ + L+ GLVP YN ING C+ +++ + M+ +PD ITYN
Sbjct: 350 KVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYN 409
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ LCK+ + +LV EM+ G+ +++T++ +ID G + + +L + +K
Sbjct: 410 ALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDK 469
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + F + C+ G + +A+ +L M KDV P A+V+ +++
Sbjct: 470 GIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSII 517
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 37/295 (12%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + TCS++L+ +C+ ++ E + ++ + G Y +I + +
Sbjct: 330 GVIIGAYTCSILLNGLCKDGKVAKAEQV--LEMLVHTGLVPTTAIYNTLINGYCQVRDLQ 387
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A I QMKS I+PD + Y ++NG+ E +AE+L E+ G+ P V T+N I
Sbjct: 388 GAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLI 447
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ + +E +++ M++ G K +VI++ ++++A CK ++ ++ +M K +V
Sbjct: 448 DAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVV 507
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEA--------------LNKGLCTQSSM------ 383
N Q Y+ +ID G +A L+E+ L KGLC S +
Sbjct: 508 PNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEEL 567
Query: 384 ---------------FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I C +G +ALELL++M D+ P R + LL
Sbjct: 568 IYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLL 622
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 114/220 (51%), Gaps = 6/220 (2%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ +M+ G ++ + +V+++ K K+ +A+ IL+ M + P+ Y +++ I
Sbjct: 463 LSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIE 522
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+A L +++ G+ ++TYN+ + GLCK + ++ ++I + G +PDV++
Sbjct: 523 SGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVS 582
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNT++ A C + +R EL++EM I L+TY ++ L S G + + L + +
Sbjct: 583 YNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMV 642
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+K + SS++ C+ K L K+M++K ++
Sbjct: 643 HKNVEPSSSIYGTR----CEN--ESKVASLKKEMSEKGIA 676
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 128/304 (42%), Gaps = 24/304 (7%)
Query: 118 IFIDLIKTYADAHRFQDSVNLF--YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
I+ LI Y Q + ++F K R + + + N +IN G C
Sbjct: 372 IYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITY-----NALIN-GLCK-------- 417
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+ + E DL V EM+K G + + +I + + ++ +L+ M+
Sbjct: 418 MEMITEAEDL--------VMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDK 469
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
GIK +++ + V+ +A + D+++ +VP+ YN I+ + E
Sbjct: 470 GIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQA 529
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ M+ G + TYN LL+ LCK +++ EL+ + +G+ ++ +Y+ +I
Sbjct: 530 FLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISA 589
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+KGD A LL+E + + + L G V L + M K+V P
Sbjct: 590 CCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPS 649
Query: 416 ARVW 419
+ ++
Sbjct: 650 SSIY 653
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 146/289 (50%), Gaps = 19/289 (6%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL----GFCFGMVD 208
A IL M+++ D T + +++ +C+ G V E + L GF ++
Sbjct: 99 AQRILQRMVSENLVPDVVTYNSLVNGLCKN---------GRVDEARMLIVDKGFSPNVIT 149
Query: 209 YTNVIRSLVKK-EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +I L ++ V +AL + + G +P++ Y ++++G++ ++ +A ELF L
Sbjct: 150 YSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL 209
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ GL PD TY V+I+GLCK VE + M+ M+E G PDV+++N ++ LCK + +
Sbjct: 210 VKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRV 269
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L+ M+ KG N +++ +I G G +A +E L +G+ ++
Sbjct: 270 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNIL 329
Query: 388 ICGLC---QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ GLC Q G +++A+ L M +K P + AL+ L KLD
Sbjct: 330 VDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 378
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 128/256 (50%), Gaps = 6/256 (2%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M GF + T + +LS +C +S + L + M K G+ +V Y ++ K
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQAL--YERMIKAGYSPDVVTYNTLLHGFCKV 58
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ +AL I + G PD+V Y ++NG + +A+ + ++ LVPDV TY
Sbjct: 59 GELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTY 118
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK-VRELNRLRELVKEMK 338
N +NGLCK V+ +I + G P+VITY+TL+ LC+ +R ++ +L +
Sbjct: 119 NSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVL 175
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+G + TY+I+IDGL + + EA L + GL + + I GLC+ G V
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235
Query: 399 KALELLKQMADKDVSP 414
AL +LK M +K P
Sbjct: 236 DALLMLKDMDEKGCVP 251
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 142/300 (47%), Gaps = 53/300 (17%)
Query: 160 MINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
+++ GF + T S ++S +C E R +S E L + K G+ + Y +I L+K
Sbjct: 138 IVDKGFSPNVITYSTLISGLCRELRGVS--EALKLFGSVLKQGYEPEVPTYNILIDGLLK 195
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL------GL 272
+++V +A + + + G++PD + YT+ ++G+ KA + D LL+L G
Sbjct: 196 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGL------CKAGRVEDALLMLKDMDEKGC 249
Query: 273 VPDVYTYNVYINGLCKQNNVE------AGIKMIAC------------------------- 301
VPDV ++N INGLCK+ V+ +G++ C
Sbjct: 250 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 309
Query: 302 ----MEELGSKPDVITYNTLLQALCKVRELNRLRE---LVKEMKWKGIVLNLQTYSIMID 354
M + G KP V+TYN L+ LCK R+ R++E L M KG V ++ TYS +ID
Sbjct: 310 TFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 369
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL G + +A LL KG ++ I GLC V +ALEL M +K P
Sbjct: 370 GLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVP 429
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M+K GF + Y ++ L ++ DA + +M G PD+V Y +L+G +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A ++FD + G VPDV TYN ING CK + ++ +++ M PDV+TYN+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK-GDIIEACGLLEEALNK 375
L+ LCK ++ R L+ + KG N+ TYS +I GL + + EA L L +
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
G + ++ I GL + V +A EL + + P A + + + + K V
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITY-TVFIDGLCKAGRVED 236
Query: 436 SFIRLVD 442
+ + L D
Sbjct: 237 ALLMLKD 243
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 6/244 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+RV A E+ + ++ G D T ++ + +C+ + D LL +++M + G +V
Sbjct: 197 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE-DALL-MLKDMDEKGCVPDVV 254
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ VI L K+++V +A +L+ M++ G P+ + + ++ G + KA F E+
Sbjct: 255 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 314
Query: 268 LVLGLVPDVYTYNVYINGLCK---QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L G+ P V TYN+ ++GLCK + ++ I + M E G PDV+TY+ L+ L K
Sbjct: 315 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 374
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L+ R L+ M+ KG + N+ TY+ +I GL + EA L + KG C ++
Sbjct: 375 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKG-CVPDTIT 433
Query: 385 DETI 388
TI
Sbjct: 434 YGTI 437
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 5/211 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ RV A+ +L M G D + + +++ +C+++ + E+L + M+ G
Sbjct: 230 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVL--LSGMEAKGCSPN 287
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV--IVQEDYVK-AEE 262
+ + +I + K A+ +M G+KP +V Y ++++G+ QE +K A
Sbjct: 288 AISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT 347
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
LFD ++ G VPDV TY+ I+GL K ++ +++ ME G P+V TYN+L+ LC
Sbjct: 348 LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC 407
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ +++ EL M KG V + TY +I
Sbjct: 408 GLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKE---KVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+EM K G +V Y ++ L K ++ +A+ + + M G PD+V Y+ +++G+
Sbjct: 312 KEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGL 371
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
A L + G +P+VYTYN I+GLC V+ +++ M E G PD
Sbjct: 372 GKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDT 431
Query: 312 ITYNTLLQA 320
ITY T++ A
Sbjct: 432 ITYGTIISA 440
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 184/406 (45%), Gaps = 27/406 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK- 124
S LHS + + P ++Y VI L + + D + D + + + P+ +F +
Sbjct: 98 SALHSPPL-SVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGY-LPDAVFFSFVAG 155
Query: 125 TYADAHRFQDSVNLFYKIPKF--RINRVGF---------------AIEILNCMINDG-FC 166
+ +A +V L K +F RI + A+ + I DG +
Sbjct: 156 SCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYS 215
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
DG + ++++ VC + + L V+ M + G + + ++ L + ++V
Sbjct: 216 PDGWSFNVVIKGVCRVGNF--QKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGH 273
Query: 227 GILNQMKSDGI-KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+L +++ DG+ P++V YT V++G A +++++L G P+ TYNV ING
Sbjct: 274 DLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLING 333
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
K ++E+ ++M + PDV+T+++L+ C+ +L+ + KEM I N
Sbjct: 334 YGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPN 393
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEE-ALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ T+SI+I L + EA G L E + + Q+ +++ I LC+ G V +A ++
Sbjct: 394 VYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIV 453
Query: 405 KQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
M +K P + L++ K I L +++ T C+
Sbjct: 454 TDMEEKGCHPDKYTYTILIIGHCMKGRIPEA--ITLFHKMVETGCR 497
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 121/288 (42%), Gaps = 24/288 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
L+ + + C P ++ ++ L Q +L ++ R+ P + + +I
Sbjct: 240 LVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQ-RDGVCMPNVVTYTSVISG 298
Query: 126 YADAHRFQDSVNLFYKI--PKFRINRVGF---------------AIEILNCMINDGFCVD 168
Y A R +D+++++ + R N V + A+ + +I D
Sbjct: 299 YCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPD 358
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S ++ C L D+ + +EM + + ++ +I SL K+ + +ALG
Sbjct: 359 VVTFSSLIDGYCRCGQL--DDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGF 416
Query: 229 LNQ--MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
L + M++D I P Y V++ + +A + ++ G PD YTY + I G
Sbjct: 417 LRELNMRAD-IAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGH 475
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
C + + I + M E G +PD IT N+ + + K N + +++
Sbjct: 476 CMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIM 523
>gi|242056929|ref|XP_002457610.1| hypothetical protein SORBIDRAFT_03g010260 [Sorghum bicolor]
gi|241929585|gb|EES02730.1| hypothetical protein SORBIDRAFT_03g010260 [Sorghum bicolor]
Length = 1089
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 145/289 (50%), Gaps = 9/289 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK--LGFCFGMVDYT 210
A+ + M G V+ + CS I+S R + L F +++K+ GF G+V T
Sbjct: 152 ALRVFEVMTRRGCQVEDRVCSSIISGF--SRTGKAGAGLDFYEKVKRQFSGFDPGLVTLT 209
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+V+ +L + + + ++ +M+ G+ D V Y +++G + + ++ +L
Sbjct: 210 SVVHALGLEGRTGEVAELMQEMECKGMNADAVFYGSMVHGYMSRGFLMEGLREHRSMLEK 269
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ D Y I+GLC++ +VE + + ME++ +KP++ITY +L+ CK L
Sbjct: 270 GITADAINYTTVIDGLCREGSVEKVMGFLDEMEQVDAKPNLITYTSLVGGFCKRDRLEDA 329
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+V++++ G+V++ YSI+ID L D+ A LL E NKG+ ++ I G
Sbjct: 330 FSIVRKLEQTGVVVDEYVYSILIDSLCKMEDLDRAFSLLTEMENKGIKASIITYNAIING 389
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIR 439
LC+ G KALE+ + +A + + + LL +++ D I+
Sbjct: 390 LCKAGHTEKALEISEGVAADNFT-----YSTLLHGYINRGDITGVMAIK 433
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 108/257 (42%), Gaps = 28/257 (10%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYK 141
Y VI L + LD +E+ + P I + L+ + R +D+ ++ K
Sbjct: 278 YTTVIDGLCREGSVEKVMGFLDEMEQVD--AKPNLITYTSLVGGFCKRDRLEDAFSIVRK 335
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ + G VD S+++ S+C+ DL D + EM+ G
Sbjct: 336 LEQ------------------TGVVVDEYVYSILIDSLCKMEDL--DRAFSLLTEMENKG 375
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
++ Y +I L K AL I S+G+ D Y+ +L+G I + D
Sbjct: 376 IKASIITYNAIINGLCKAGHTEKALEI-----SEGVAADNFTYSTLLHGYINRGDITGVM 430
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ D L G+ DV T NV I N V + M E+G +P+ ITY+T++ L
Sbjct: 431 AIKDRLEGSGISIDVVTCNVLIKASFMINKVNDAWSLFHKMPEMGLRPNTITYHTIIDKL 490
Query: 322 CKVRELNRLRELVKEMK 338
CK E+++ EL E K
Sbjct: 491 CKAEEVDKALELFDEYK 507
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 205 GMVD---YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
G+VD Y+ V+ L K + AL + MK +G P+I+ + VL+G+ Q +A
Sbjct: 717 GLVDLAMYSIVVDGLCKGGYLEKALDLCESMKKEGFHPNIIIHNSVLSGLCHQGCLTEAF 776
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
LFD L ++P + TY + I LC++ ++ ++ M G KP YN L+
Sbjct: 777 RLFDYLENSNMLPTIITYTILIGALCREGLLDDADQLFQKMSTKGIKPTTRVYNLLISGY 836
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C + EL+ ++ ++ + T +I+GL KG+ A E ++ +
Sbjct: 837 CNFGLTEKALELMSHLEELFLLPDCFTLGAIINGLCLKGETEAALSFFNEYRHRDMEPDF 896
Query: 382 SMFDETICGLCQRGLVRKALELLKQM 407
F + GL +G + ++ +L++M
Sbjct: 897 VGFMSLVKGLYAKGRMEESRGILREM 922
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 1/204 (0%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+ +L K+ +V DA L + G+ D+ Y++V++G+ KA +L + +
Sbjct: 692 GAVFALKKQGEVLDACNFLKIAEQSGL-VDLAMYSIVVDGLCKGGYLEKALDLCESMKKE 750
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G P++ +N ++GLC Q + ++ +E P +ITY L+ ALC+ L+
Sbjct: 751 GFHPNIIIHNSVLSGLCHQGCLTEAFRLFDYLENSNMLPTIITYTILIGALCREGLLDDA 810
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L ++M KGI + Y+++I G + G +A L+ L I G
Sbjct: 811 DQLFQKMSTKGIKPTTRVYNLLISGYCNFGLTEKALELMSHLEELFLLPDCFTLGAIING 870
Query: 391 LCQRGLVRKALELLKQMADKDVSP 414
LC +G AL + +D+ P
Sbjct: 871 LCLKGETEAALSFFNEYRHRDMEP 894
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 154/378 (40%), Gaps = 30/378 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SL H P YH +I L + + + D +K F T + LIK
Sbjct: 466 SLFHKMPEMGLRPNTITYHTIIDKLCKAEEVDKALELFDEYKKDSGFSTA-VVHECLIKA 524
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC--MINDGFCVDGKTCSLILSSVCEQR 183
+ + +FY + + +I R+ F NC +I+ F G+ +L VC+
Sbjct: 525 LCYGGKVDMADQIFYDLVQKKI-RLNF----FNCRKLIHAHFKRHGEHG--VLDFVCKVG 577
Query: 184 DLSSD---ELLGFVQEMKKLGFCF-GMVDYTNVIR--SLVKKEKV-FDALGILNQMKSDG 236
+L D + + C+ +D ++R ++ K + L L++ S+
Sbjct: 578 ELDIDLFSAVCNYASAFLSNRNCWQAAMDAYKLLRMQAIAGTSKTCYKLLKSLHRNGSEE 637
Query: 237 IKPDIVCYTMVLNGVI-----------VQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++C + ++G++ + + V F + G VP V +
Sbjct: 638 VIQPLLCDFIKIHGLLDPTMINMMSCYLSKKCVSKAIWFSNYMGKGSVP-VSVLRGAVFA 696
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
L KQ V + E+ G D+ Y+ ++ LCK L + +L + MK +G N
Sbjct: 697 LKKQGEVLDACNFLKIAEQSG-LVDLAMYSIVVDGLCKGGYLEKALDLCESMKKEGFHPN 755
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ ++ ++ GL +G + EA L + N + + I LC+ GL+ A +L +
Sbjct: 756 IIIHNSVLSGLCHQGCLTEAFRLFDYLENSNMLPTIITYTILIGALCREGLLDDADQLFQ 815
Query: 406 QMADKDVSPGARVWEALL 423
+M+ K + P RV+ L+
Sbjct: 816 KMSTKGIKPTTRVYNLLI 833
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 115/218 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ K G +V + ++ +K + + + N M++ G++PD+ Y++++NG+ +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A LFDE+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNT
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK +L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ + I GLCQ G A ++L++M + P
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 150/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + + G
Sbjct: 109 EHLMKLKYFKL--VWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E + KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA + ++M G+ P+ V +T +++G A E++ ++L
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L PD+ TYN I GLCK+ +++ +I M G KPD TY TL+ CK +L
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E L+ GL + + I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
C++G V +LLK+M P
Sbjct: 389 NEFCKKGDVWXGSKLLKEMQRDGYKP 414
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + +L EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKMDDANVL--FDEMLDKGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+++
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD +TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDG 411
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + G +P V+++NTL+
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +LN L M+ G+ ++ TYS++I+GL + + +A L +E L+KGL
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M++ D T + ++ +C++ DL + L + EM G
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL--IDEMIMKGLKPDKF 312
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + I+ D V YT +++G+ + V AE++ E+
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L +GL P++ TY + IN CK+ +V G K++ M+ G KP V+T
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 120/235 (51%), Gaps = 12/235 (5%)
Query: 192 GFVQE------------MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
GFV+E + K G +V + ++ +K + + + N M++ G++P
Sbjct: 145 GFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQP 204
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D+ Y++++NG+ + A LFDE+L GLVP+ T+ I+G CK V+ +++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M PD+ITYNTL+ LCK +L + ++L+ EM KG+ + TY+ +IDG +
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKE 324
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GD+ A + + + + + I GLCQ G A ++L++M + P
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ VK+ ++ A + + + G
Sbjct: 109 EHLMKLKYFKL--VWGFYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWG 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E + KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA + ++M G+ P+ V +T +++G A E++ ++L
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L PD+ TYN I GLCK+ +++ +I M G KPD ITY TL+ CK +L
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E L+ GL + + I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
C++G V +LLK+M P
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYKP 414
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + +L EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKMDDANVL--FDEMLDKGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+++
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++G K+ + + + + G +P V+++NTL+
Sbjct: 123 FYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +LN L M+ G+ ++ TYS++I+GL + + +A L +E L+KGL
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+EI M++ D T + ++ +C++ DL + L + EM G +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL--IDEMIMKGLKPDKI 312
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + I+ D V YT +++G+ + V AE++ E+
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L +GL P++ TY + IN CK+ +V G K++ M+ G KP V+T
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 123/251 (49%), Gaps = 3/251 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
SLI C + S LL EM G MV + +I +L K+ KV +A +L M
Sbjct: 255 SLIHGFCCAGKWEESKRLL---DEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 311
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
GI PD+V Y ++ G + D A ELF + G PDV +YNV ING K V
Sbjct: 312 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 371
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
E +K+ M +G +P+VITY++LL+ + +++ ++L MK GI N TY I
Sbjct: 372 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 431
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+DGL + EA L E + + + I GLC+ G + A EL ++++++
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491
Query: 413 SPGARVWEALL 423
P + ++
Sbjct: 492 EPNVVTYTIMI 502
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 112/218 (51%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y ++ L K + +A + +MK+ G+ P I+ Y +++G + +++ L D
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLD 274
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GL PD+ T+NV I+ LCK+ V K++ M E G PD++TYN+L++ C V
Sbjct: 275 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 334
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+LN REL M KG ++ +Y+++I+G + + EA L E L G +D
Sbjct: 335 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 394
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+ G V A +L M ++ + + L
Sbjct: 395 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFL 432
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 133/264 (50%), Gaps = 2/264 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L MI G D T + ++ C DL+S L FV M G ++ Y +
Sbjct: 304 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL-FVS-MPSKGCEPDVISYNVL 361
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K KV +A+ + N+M G +P+++ Y +L G+ + A++LF + G+
Sbjct: 362 INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 421
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ YTY ++++GLCK + + +K+ ++ K ++ N L+ LCK +L E
Sbjct: 422 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 481
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +++ +G N+ TY+IMI G +G + +A L+++ G ++ + G
Sbjct: 482 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFY 541
Query: 393 QRGLVRKALELLKQMADKDVSPGA 416
+ + + ++LL +MA KDVSP A
Sbjct: 542 ESNKLEEVVQLLHRMAQKDVSPDA 565
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 41/285 (14%)
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI-- 237
C+ ++++ L F M + + + +++ L K + + NQM+ G+
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 238 ---------------------------------KPDIVCYTMVLNGVIVQEDYVKAEELF 264
P+IV Y ++ G+ ++ +A LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM------EELGSKPDVITYNTLL 318
+ LG PDV TY I GLC N+ +K+ M E+ KP+VITYN ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCKV + ++L +EMK +G++ ++ +Y+ +I G G E+ LL+E L++GL
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F+ I LC+ G V +A +LL M + + P + +L+
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLI 327
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 8/284 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I + N M G D T +++L+ +C L + F +++ G+
Sbjct: 81 KIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLR-EGFAAFAGILRR-GYSPN 138
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I+ L + ++ +A + +M+ G PD+V Y ++ G+ + A +L
Sbjct: 139 IVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQ 198
Query: 266 ELL------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
E+L + P+V TYN+ ++GLCK + ++ M+ G P +I+YN+L+
Sbjct: 199 EMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIH 258
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
C + + L+ EM +G+ ++ T++++ID L +G +IEA LL + G+
Sbjct: 259 GFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVP 318
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G C G + A EL M K P + L+
Sbjct: 319 DLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 362
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
MK G Y + L K + +F+A+ + ++KS K +I +++G+
Sbjct: 416 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A ELF++L G P+V TY + I+G C++ V+ +I ME G PD+ITYNT
Sbjct: 476 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
L++ + +L + +L+ M K + + T SI++D L SK + + C
Sbjct: 536 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML-SKDEKYQEC 584
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F +V A ++ + M G + T + L +C+ L E + E+K F
Sbjct: 401 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF--EAMKLFTELKSSNFKL 458
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ + +I L K K+ A + ++ ++G +P++V YT++++G + KA L
Sbjct: 459 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 518
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++ G PD+ TYN + G + N +E ++++ M + PD IT + ++ L K
Sbjct: 519 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 577
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 165/366 (45%), Gaps = 38/366 (10%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIE--KRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
Y+ VI++L + D++S L ++ R + + F LI Y ++ + +LF
Sbjct: 13 TYNAVIRSLCRRA---DLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLF 69
Query: 140 YKIPKFRINRVGFAIEILN-CMINDGFCVDGKTCSLI-LSSVCEQRDLS----------- 186
K+P R GFA ++++ + +GFC G+ + L +Q D+
Sbjct: 70 DKMP-LR----GFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMYAALVKGLCK 124
Query: 187 ---SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+E L ++ MK+LG+ Y V+ + K +A +L +M G+ P +V
Sbjct: 125 AGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVT 184
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVL------GLVPDVYTYNVYINGLCKQNNVEAGIK 297
T V+N Y K + D L VL G P+V+TYN + G C + V +
Sbjct: 185 CTAVINA------YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMA 238
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M G PD +TYN L++ C + L++ M+ G++ + TY+ +I+ L
Sbjct: 239 LLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 298
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G +AC L + +G+ + F+ I GLC+ G V A + L++M +P
Sbjct: 299 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTY 358
Query: 418 VWEALL 423
+ + +
Sbjct: 359 TYSSFI 364
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 159/350 (45%), Gaps = 18/350 (5%)
Query: 80 PEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P+AY F +I +Q + D + R F + LI+ + + R ++V
Sbjct: 44 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLR-GFAQDVVSYAALIEGFCETGRIDEAVE 102
Query: 138 LFYKIPK-------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
LF ++ + + R + +L M G+ + + ++ C +R
Sbjct: 103 LFGEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERK 162
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
E + +QEM + G +V T VI + K+ ++ DAL +L MK G KP++ Y
Sbjct: 163 AKEAEEM--LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 220
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ G + KA L +++ V G+ PD TYN+ I G C ++E+ +++ ME
Sbjct: 221 NALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 280
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G D TYN L+ ALCK ++ L ++ +GI N T++ +I+GL G +
Sbjct: 281 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDI 340
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
A LE+ ++ G + + I LC+ ++ L + +M KDV P
Sbjct: 341 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 390
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 11/298 (3%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A+ +LN M G D T +L++ C + S ++ M+ G
Sbjct: 231 GKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIES--AFRLLRLMEGDGLIADQY 288
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I +L K + A + + +++ GIKP+ V + ++NG+ A + +++
Sbjct: 289 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKM 348
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G PD YTY+ +I LCK + G+ I M + KP + Y ++ L K R
Sbjct: 349 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 408
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ EM G ++ TY+ + +G + EA +L E G+ + ++
Sbjct: 409 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 468
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ G G A+ +LKQM P + LL V +RLV+ +L
Sbjct: 469 MDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR---------MRLVEDVL 517
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 126/334 (37%), Gaps = 54/334 (16%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A + L M++ G D T S + +C+ + S E L F+ EM + V
Sbjct: 336 GKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK--GSQEGLSFIGEMLQKDVKPSTV 393
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+YT VI L+K+ +M S G PD+V YT + ++ +AE + E+
Sbjct: 394 NYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 453
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ D YN ++G + + ++ M + S P+ TY LL+ L ++R +
Sbjct: 454 SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLV 513
Query: 328 NRLRELVKEMKWKGIVL-----------------NLQTYSIMIDGLASKGDIIEACGLLE 370
+ L WK I L N TYS +++G + G EA L+
Sbjct: 514 EDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVS 573
Query: 371 --------------EALNKGLCTQSSMFDE--TICGLCQRGLV----------------- 397
AL C D +C + Q G +
Sbjct: 574 LMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEG 633
Query: 398 --RKALELLKQMADKDVSPGARVWEALLLSSVSK 429
KA E+ KD SP VW+ ++ + K
Sbjct: 634 QTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 667
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 113/292 (38%), Gaps = 25/292 (8%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
G M++ G D T + + + C + L+ E + EM K G + Y
Sbjct: 409 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE--NVLMEMSKNGVTVDTMAYN 466
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI---VQEDYV--------K 259
++ + A+ IL QM S P+ Y ++L ++ + ED + K
Sbjct: 467 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 526
Query: 260 AEELFDELLVLGL---------VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
A EL D V GL +P+ TY+ + G + E +++ M+E +
Sbjct: 527 AIELTD---VFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 583
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
Y L+ CK + LV M G + +L +Y ++ GL +G +A +
Sbjct: 584 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFM 643
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ K ++ I GL ++G + E++ + + P + + L
Sbjct: 644 NSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 695
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 37/204 (18%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ + M + F + T S IL E D ++E V MK+ YT ++
Sbjct: 536 LFDVMKKNEFLPNSGTYSSILEGFSE--DGRTEEATSLVSLMKEDSISLNEDIYTALVTC 593
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K ++ DA ++ M G P ++ Y +L+G+I + KA+E+F PD
Sbjct: 594 FCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPD 653
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ V I+GL K+ + + +MI +E + +P
Sbjct: 654 EIVWKVIIDGLIKKGHSDISREMIIMLERMNCRP-------------------------- 687
Query: 336 EMKWKGIVLNLQTYSIMIDGLASK 359
+ QTY+++ + L +
Sbjct: 688 ---------SHQTYAMLTEELPDR 702
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 150/329 (45%), Gaps = 27/329 (8%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTC- 172
EF + L+ A R D++ L ++ + N V + + + DG C +GK
Sbjct: 339 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV------DGLCKEGKVAV 392
Query: 173 -----SLILSSVCEQRDL-------------SSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
SL+ + + +L +S+ L + EMK G + Y +I
Sbjct: 393 ADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIW 452
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L K +K+ +A +L++M G++P+ V YT +++ +A L ++ GL P
Sbjct: 453 GLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQP 512
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+V TY I+GLCK ++ I M ELG P+V Y TL+ CK+ L++ L+
Sbjct: 513 NVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLM 572
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
EM KG+ L+ Y+ +IDG +GD+ A L + + GL + I G C
Sbjct: 573 NEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNM 632
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
++++A +L +M ++P + L+
Sbjct: 633 NMMQEARGVLSEMIGTGITPDKTAYNCLI 661
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 116/231 (50%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ EMK+LG +V + + + K+ V +A+ + QM+ G+ P+ YT +++G
Sbjct: 291 YFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTC 350
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
A L DE++ GLVP+V TY V ++GLCK+ V +++ ME G K + +
Sbjct: 351 KAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANEL 410
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y TL+ + R +L+ EMK KG+ L++ Y +I GL + EA LL +
Sbjct: 411 LYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM 470
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GL + ++ + + G +A+ LL ++ D + P + AL+
Sbjct: 471 DDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALI 521
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 24/306 (7%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+F L+ AD D+V ++ + R+ + +TC+ IL
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPP------------------NTRTCNHILL 176
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+ R G V+ + + + + VI L K+ ++ +A + +MK+ G
Sbjct: 177 RLARNRQG------GLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGC 230
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PD+V Y +++G + + E L E+ G DV TYN IN K +E
Sbjct: 231 SPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYS 290
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M+ LG +V+T +T + A CK + +L +M+ +G++ N TY+ ++DG
Sbjct: 291 YFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTC 350
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G + +A LL+E +++GL + + GLC+ G V A ++L M V
Sbjct: 351 KAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANEL 410
Query: 418 VWEALL 423
++ L+
Sbjct: 411 LYTTLI 416
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
I+ ++ + A + ++V L +KIP + N V + C + DG C G
Sbjct: 481 IYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTY------CALIDGLCKAG------ 528
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
S E + +M++LG + YT +I K + A+ ++N+M
Sbjct: 529 ----------SIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDK 578
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ D V YT +++G + Q D A L +++ GL D+Y Y +I+G C N ++
Sbjct: 579 GMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEA 638
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
+++ M G PD YN L++ K+ + L EM+
Sbjct: 639 RGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEME 681
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 139/273 (50%), Gaps = 2/273 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ MI++G KT S ++ ++ + D + +++ ++EMK +G + YT
Sbjct: 219 ALKVYKRMISEGMKPSMKTYSALMVALGRRGD--TRKIMNLLEEMKSIGLRPNIYTYTIC 276
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
IR+L + ++ DA GI +M +G PD++ YT++++ + KA+EL+ ++
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY ++ K ++E + ME G PDV+TY L++ALCK +++R +
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFD 396
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ M KGI NL TY+ MI GL + EA LLE + G+ + + I
Sbjct: 397 MLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYG 456
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G KA++ + M + + P A L +
Sbjct: 457 KSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 157/346 (45%), Gaps = 19/346 (5%)
Query: 79 PPEAYHFVIKTLAENSQFCDISSVLDHIEK--RENFETPEFIFI-DLIKTYADAHRFQDS 135
P A+ + K +++ + F + +++ + RE + +F+ DL++
Sbjct: 111 PNSAFSY-FKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTY 169
Query: 136 VNLFYKIP-KFRINRVGFAIEILNCMINDGFCVDGKTCS----LILSSVCEQRDLSSDEL 190
+ +F + K I R FA L M GF ++ + + L+L C +E
Sbjct: 170 MTIFKALSIKGGIGRAPFA---LRKMTEVGFILNAYSYNGLIHLLLPGFC-------NEA 219
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L + M G M Y+ ++ +L ++ + +L +MKS G++P+I YT+ +
Sbjct: 220 LKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRA 279
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ A +F E+ G PDV TY V I+ LC ++ ++ M PD
Sbjct: 280 LGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPD 339
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+TY TL+ KV +L ++ EM+ G ++ TY+I+I+ L GD+ A +L+
Sbjct: 340 RVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLD 399
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KG+ ++ ICGL + + +ALELL+ M V P A
Sbjct: 400 VMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTA 445
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 148/311 (47%), Gaps = 23/311 (7%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGF--AIEILNCMINDGFCVDGKTCS 173
+ + + LIK + D+ N+F K K +G +E NC++ DG
Sbjct: 760 DHVMLPLIKVLCKRKKALDAQNVFDKFTK----NLGIHPTLESYNCLM------DG---- 805
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
L+ S+ E+ L ++MK G Y ++ + K +++ + ++M+
Sbjct: 806 LLGSNFTEKA-------LELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMR 858
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
S G +P+ + + ++++ ++ + KA +L+ EL+ P TY I+GL K E
Sbjct: 859 SRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSE 918
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+K+ M + G P+ + YN L+ K E++ EL K+M +GI +L++Y+I++
Sbjct: 919 QAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILV 978
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ L G I EA EE GL + ++ I GL + + +AL L +M ++ +S
Sbjct: 979 ECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGIS 1038
Query: 414 PGARVWEALLL 424
P + AL+L
Sbjct: 1039 PDLYTYNALIL 1049
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 141/322 (43%), Gaps = 6/322 (1%)
Query: 123 IKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
+K A +H D V + KF ++ + N M DG+ D T ++++ ++C+
Sbjct: 329 VKMRASSHS-PDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK 387
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
D+ D + M G + Y +I L+K ++ +AL +L M+S G+KP
Sbjct: 388 SGDV--DRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTA 445
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y + ++ D KA + F+ + G++P + N + L + + +
Sbjct: 446 FSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFND 505
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
+ + G PD +TYN L++ K ++++ +L+ EM KG ++ + +I+ L G
Sbjct: 506 LHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGR 565
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ A + N L ++ + GL + G + KALEL M + P + +
Sbjct: 566 VDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNS 625
Query: 422 LL--LSSVSKLDFVNTSFIRLV 441
LL LS +D F R+
Sbjct: 626 LLDCLSKNDAVDLALKMFCRMT 647
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 4/297 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ A I M ++G D T ++++ ++C L D+ +M+
Sbjct: 282 RARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKL--DKAKELYVKMRASSHSPD 339
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ K + N+M+ DG PD+V YT+++ + D +A ++ D
Sbjct: 340 RVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLD 399
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G+ P+++TYN I GL K ++ ++++ ME LG KP +Y + K
Sbjct: 400 VMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSG 459
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + + + MK +GI+ ++ + + LA G I EA + + GL S ++
Sbjct: 460 DPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYN 519
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
+ + G + KA +LL +M K P + +L+ L ++D F RL
Sbjct: 520 MLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRL 576
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 2/252 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++I+S++ + +L ++ L E+ F Y +I L+K + A+ I
Sbjct: 868 THNIIISALVKSNNL--NKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFE 925
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M G P+ V Y +++NG + A ELF +++ G+ PD+ +Y + + LC
Sbjct: 926 EMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITG 985
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ ++ ++ G PD ++YN ++ L K R L+ L EMK +GI +L TY+
Sbjct: 986 RIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYN 1045
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I L G + A + EE GL ++ I G G +A + K+M
Sbjct: 1046 ALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVV 1105
Query: 411 DVSPGARVWEAL 422
SP + L
Sbjct: 1106 GCSPNTETFAQL 1117
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 12/276 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L+ M G + T + ++ + + R L DE L ++ M+ LG Y
Sbjct: 394 AFDMLDVMTTKGIFPNLHTYNTMICGLLKARRL--DEALELLENMESLGVKPTAFSYVLF 451
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVC-----YTMVLNGVIVQEDYVKAEELFDEL 267
I K A+ MK GI P I YT+ G I + AE++F++L
Sbjct: 452 IDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISE-----AEDIFNDL 506
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GL PD TYN+ + K ++ ++++ M G +PDV+ N+L+ L K +
Sbjct: 507 HKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRV 566
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++ +K + + TY+I++ GL +G I++A L G + F+
Sbjct: 567 DAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSL 626
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ L + V AL++ +M + +P + ++
Sbjct: 627 LDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII 662
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 106/212 (50%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S++ + +EM G V Y +I K ++ A + +M +GI+PD+ YT+
Sbjct: 917 SEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ + + +A + F+EL + GL PD +YN INGL K ++ + + + M+ G
Sbjct: 977 LVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG 1036
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD+ TYN L+ L +++ ++ +E++ G+ ++ TY+ +I G + G+ +A
Sbjct: 1037 ISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAF 1096
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+ ++ + G + F + + GLV
Sbjct: 1097 SVFKKMMVVGCSPNTETFAQLPNKYPRAGLVH 1128
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 4/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI+ M G C+ L ++ E +S E ++ K G V Y +
Sbjct: 464 AIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAE--DIFNDLHKCGLSPDSVTYNML 521
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
++ K ++ A +L++M S G +PD++ ++N + A ++F L L L
Sbjct: 522 MKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKL 581
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V TYN+ + GL K+ + +++ M E G P+ IT+N+LL L K ++ +
Sbjct: 582 APTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALK 641
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ M ++ TY+ +I GL +G I A + + K L I G+
Sbjct: 642 MFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQ-MKKFLSPDYVTLCTLIPGVV 700
Query: 393 QRGLVRKALELLKQMADKD-VSPGARVWEALL 423
+ G V A++++ + + + ++ W L+
Sbjct: 701 RHGRVEDAIKVVMEFVHQACLQTNSQFWGELM 732
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 23/346 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IFIDLIK 124
SL +I C Y ++ LA+N + + ++++ I N TP + L+
Sbjct: 253 SLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKIT--ANGCTPTIATYNALLN 310
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
R +++++L KI +++G D T + ++ + +++
Sbjct: 311 GLCKMGRLEEAIDLLRKI------------------VDNGCTPDVVTYTSLIDGLGKEK- 351
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
S E +EM G V YT +IR L++ K+ A + M S G PD+V
Sbjct: 352 -RSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTL 410
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+ +++G+ A +F + GL P+ Y+ I+GLCK ++ ++M+A M++
Sbjct: 411 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 470
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
PD ITYN L+ LCK ++ R EM G ++ TY+I+I G G+
Sbjct: 471 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 530
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
ACG+ ++ + + I GLC+R + KA + M ++
Sbjct: 531 ACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKER 576
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 144/314 (45%), Gaps = 38/314 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ AI++L ++++G D T + ++ + +++ S E +EM G
Sbjct: 33 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK--RSFEAYKLFKEMALRGLALD 90
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT +IR L++ K+ A + M S G PD+V + +++G+ A +F
Sbjct: 91 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 150
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ GL P+ Y+ I+GLCK ++ ++M+A M++ PD ITYN L+ LCK
Sbjct: 151 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSG 210
Query: 326 ELNRLR------------------------------------ELVKEMKWKGIVLNLQTY 349
++ R L +E G +++ TY
Sbjct: 211 DVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTY 270
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ ++D LA I EA L+E+ G + ++ + GLC+ G + +A++LL+++ D
Sbjct: 271 TAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 330
Query: 410 KDVSPGARVWEALL 423
+P + +L+
Sbjct: 331 NGCTPDVVTYTSLI 344
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + +L+ +C+ L +E + ++++ G +V YT++I L K+++ F+A +
Sbjct: 304 TYNALLNGLCKMGRL--EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M G+ D VCYT ++ ++ +A ++ + G VPDV T + I+GL K
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ A +++ ME G P+ + Y+ L+ LCK R+++ E++ +MK + TY+
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 481
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+IDGL GD+ A +E L G ++ I G C+ G A + M+
Sbjct: 482 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSS 541
Query: 411 DVSPGARVWEALL 423
S + AL+
Sbjct: 542 RCSANVVTYGALI 554
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + +L+ +C+ L +E + ++++ G +V YT++I L K+++ F+A +
Sbjct: 23 TYNALLNGLCKMGRL--EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 80
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M G+ D VCYT ++ ++ +A ++ + G VPDV T + I+GL K
Sbjct: 81 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 140
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ A +++ ME G P+ + Y+ L+ LCK R+++ E++ +MK + TY+
Sbjct: 141 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 200
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
++IDGL GD+ A +E L G ++ I G C+ G A L Q
Sbjct: 201 VLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQ 256
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 175/417 (41%), Gaps = 29/417 (6%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
Q +IP+ SS+ + + + C P +I L++ + + +E R
Sbjct: 103 QTGKIPQA----SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR-GL 157
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIE 155
E ++ LI A + ++ + ++ K + V A
Sbjct: 158 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARA 217
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
+ M+ G D T ++++S C+ D +S L QE G + YT ++
Sbjct: 218 FFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSL---AQETTINGCTIDIHTYTAIV 274
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
L K +K+ +A+ ++ ++ ++G P I Y +LNG+ +A +L +++ G
Sbjct: 275 DWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 334
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PDV TY I+GL K+ K+ M G D + Y L++ L + ++ + +
Sbjct: 335 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV 394
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
K M G V ++ T S MIDGL+ G I A + + +GL ++ I GLC+
Sbjct: 395 YKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 454
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ ALE+L QM +P + +L+ + K V + D++L CK
Sbjct: 455 ARKMDCALEMLAQMKKAFCTPDTITYN-ILIDGLCKSGDVEAAR-AFFDEMLEAGCK 509
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 126/294 (42%), Gaps = 22/294 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
+L+ + C P Y+ ++ L + + + +L I +N TP+ + + LI
Sbjct: 288 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV--DNGCTPDVVTYTSLID 345
Query: 125 TYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCV 167
R ++ LF ++ + ++ A + M + G
Sbjct: 346 GLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVP 405
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T S ++ + + + + + + M+ G V Y+ +I L K K+ AL
Sbjct: 406 DVVTLSTMIDGLSKAGRIGA--AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 463
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L QMK PD + Y ++++G+ D A FDE+L G PDVYTYN+ I+G C
Sbjct: 464 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 523
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
K N +A + M +V+TY L+ LCK R+L + + MK +G
Sbjct: 524 KAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 6/232 (2%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
K+ +A+ ++ ++ ++G P I Y +LNG+ +A +L +++ G PDV TY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
I+GL K+ K+ M G D + Y L++ L + ++ + + K M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G V ++ T S MIDGL+ G I A + + +GL ++ I GLC+ + A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 401 LELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPCK 450
LE+L QM +P + L+ L ++ F D++L CK
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFF----DEMLEAGCK 228
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++L+ M G D + S +++ R + + + M G ++ Y++
Sbjct: 170 ALDVLDRMQEQGVKPDSQNYSSAIAACGNARQW--ERAVELLASMAARGTPPDVLTYSSA 227
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K + +A+G+L MK G+KP+++ Y+ ++ + A +L E+ +GL
Sbjct: 228 IAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGL 287
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY+ I+ K+ E +++ M G ++ITY+ ++ A K +
Sbjct: 288 APDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVA 347
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L++EM+ G+ ++ TYS I A KG EA GLL E +G+ + + I
Sbjct: 348 LLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACA 407
Query: 393 QRGLVRKALELLKQMADKDVSP 414
+RG R+A++LL++M V P
Sbjct: 408 KRGRWREAIDLLQEMQAHGVPP 429
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 2/262 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L M G D T S +++ + E +G ++ MK G ++ Y+
Sbjct: 205 AVELLASMAARGTPPDVLTYSSAIAACAKVSRWK--EAVGLLRSMKGQGVKPNVIVYSAA 262
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K + A+ +L +M + G+ PD++ Y+ V++ + + A L E+ G+
Sbjct: 263 ISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGV 322
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
V ++ TY++ I K E + ++ M+E G PDVITY++ + A K +
Sbjct: 323 VANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVG 382
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L++EM +G+ N +Y I+I A +G EA LL+E G+ + I
Sbjct: 383 LLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACA 442
Query: 393 QRGLVRKALELLKQMADKDVSP 414
Q +AL LL++M ++P
Sbjct: 443 QASRWEQALWLLREMPATGLTP 464
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 153/350 (43%), Gaps = 22/350 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYK 141
Y VI A+ Q+ + ++L E +EN P+ I + I A +++++V L +
Sbjct: 329 YSIVIGACAKWGQWEEAVALLR--EMQENGVAPDVITYSSTISACAKKGQWEEAVGLLRE 386
Query: 142 IPKFRI--NRVGFAIEILNC---------------MINDGFCVDGKTCSLILSSVCEQRD 184
+P + N + + I I C M G D S + + C Q
Sbjct: 387 MPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDA-CAQAS 445
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
++ L ++EM G ++ Y + I + K + A+ +L +M + G+ PD++ Y
Sbjct: 446 -RWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITY 504
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+ V+ + + +A +LF E+ G+ PDV + N IN + E + ++ M
Sbjct: 505 SAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPT 564
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
+G PD I+Y T + A K + +L++EM G+ + +Y + + G E
Sbjct: 565 MGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKE 624
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
A LL + L GL ++ I + G ++A LL+QM ++P
Sbjct: 625 ALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAP 674
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 150/320 (46%), Gaps = 11/320 (3%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKT---YADAHRFQDSVNLFYKIPKFRINRVGFAIEI 156
S+V+D KR +E P F + + T A+ + + K ++ A+ +
Sbjct: 295 STVIDACAKRGQWE-PAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWE-----EAVAL 348
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
L M +G D T S +S+ ++ +E +G ++EM G + Y VI +
Sbjct: 349 LREMQENGVAPDVITYSSTISACAKKGQW--EEAVGLLREMPMEGVTPNAISYGIVISAC 406
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K+ + +A+ +L +M++ G+ PD++ Y+ ++ + +A L E+ GL P+V
Sbjct: 407 AKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNV 466
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
+YN I+ K + ++++ M G PDVITY+ ++ + R+ +L +E
Sbjct: 467 ISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFRE 526
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M+ +GI ++ + + I+ A G EA +L E GL + + I +
Sbjct: 527 MQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDR 586
Query: 397 VRKALELLKQMADKDVSPGA 416
++ ++LL++M+ ++P A
Sbjct: 587 WKEIIDLLREMSTVGLTPDA 606
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 150/348 (43%), Gaps = 21/348 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S + P Y I A+ S++ + +L + K + + ++ I
Sbjct: 208 LLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSM-KGQGVKPNVIVYSAAISAC 266
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+++ +V+L ++P VG A +++ T S ++ + C +R
Sbjct: 267 RKGGQWETAVDLLKEMPA-----VGLAPDVI-------------TYSTVIDA-CAKRG-Q 306
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ + EM G ++ Y+ VI + K + +A+ +L +M+ +G+ PD++ Y+
Sbjct: 307 WEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSS 366
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ + + +A L E+ + G+ P+ +Y + I+ K+ I ++ M+ G
Sbjct: 367 TISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHG 426
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PDVI Y+ + A + + L++EM G+ N+ +Y+ ID A G A
Sbjct: 427 VPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAV 486
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
LL E GL + I +AL+L ++M + ++P
Sbjct: 487 ELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITP 534
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L + M++ G +Y++ I + + A+ +L M + G PD++ Y+ +
Sbjct: 171 LDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAA 230
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ +A L + G+ P+V Y+ I+ K E + ++ M +G PD
Sbjct: 231 CAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPD 290
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
VITY+T++ A K + L+ EM KG+V N+ TYSI+I A G EA LL
Sbjct: 291 VITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLR 350
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
E G+ + TI ++G +A+ LL++M + V+P A
Sbjct: 351 EMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNA 396
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 155/356 (43%), Gaps = 21/356 (5%)
Query: 89 TLAENSQFCDISSVLDHIEK-RENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK-- 144
TL E Q+ D LD +++ +E P+ + I +A +++ +V L +
Sbjct: 157 TLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARG 216
Query: 145 ---------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE 189
+++R A+ +L M G + S +S+ ++ +
Sbjct: 217 TPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISAC--RKGGQWET 274
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+ ++EM +G ++ Y+ VI + K+ + A +L +M + G+ +I+ Y++V+
Sbjct: 275 AVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIG 334
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
+ +A L E+ G+ PDV TY+ I+ K+ E + ++ M G P
Sbjct: 335 ACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTP 394
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
+ I+Y ++ A K +L++EM+ G+ ++ YS ID A +A LL
Sbjct: 395 NAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLL 454
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
E GL ++ I + G + A+ELL++M ++P + A++ S
Sbjct: 455 REMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIAS 510
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 129/307 (42%), Gaps = 22/307 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
LL + P +Y VI A+ ++ + +L E + + P+ I + I
Sbjct: 382 GLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQ--EMQAHGVPPDVINYSAAID 439
Query: 125 TYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCV 167
A A R++ ++ L ++P + R A+E+L M G
Sbjct: 440 ACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAP 499
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T S +++S R +E L +EM++ G +V I + + +AL
Sbjct: 500 DVITYSAVIASCAMGRQW--EEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALD 557
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +M + G+ PD + Y ++ + + + +L E+ +GL PD +Y ++
Sbjct: 558 VLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACS 617
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ + ++ M +G PDV+TYN+ + A K L+++M G+ ++
Sbjct: 618 VDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVN 677
Query: 348 TYSIMID 354
+++ ID
Sbjct: 678 SFNAAID 684
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 103/237 (43%), Gaps = 21/237 (8%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
P+ I + +I + A +++++++LF ++ R G ++++C C G
Sbjct: 498 APDVITYSAVIASCAMGRQWEEALDLFREM-----QRQGITPDVVSCNTAINACAQGGWW 552
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+E L + EM +G + Y I + K ++ + + +L +M
Sbjct: 553 ---------------EEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREM 597
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ G+ PD + Y ++ V + +A L ++L +GL PDV TYN IN K
Sbjct: 598 STVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRW 657
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ ++ M G PDV ++N + A + E++ EM+ G+ N TY
Sbjct: 658 KEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATY 714
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE L +QE +KL F V+Y+ ++ + K+ K+ A ++++M S G PD+V YT
Sbjct: 438 GDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTS 497
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
VL+G +A+++ ++ P+ TY ++NGLC+ KM+ EE
Sbjct: 498 VLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEW 557
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+ ITY+ ++ L + +LN ++V+EM KG N ++++ L G EA
Sbjct: 558 WTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREAN 617
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
LL+E +NKG F I G CQ+ + AL LL M + P + A L+ +
Sbjct: 618 QLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTA-LIDA 676
Query: 427 VSKLDFV 433
++K D +
Sbjct: 677 LAKTDRI 683
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 14/253 (5%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
F F MV Y+ R + DA+ +L M+ G++P++ ++ +++ + KA
Sbjct: 283 AFGFVMVSYSRAGR-------LRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKA 335
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ ++++G+ P+V TYN I G C + V+ +++I M G PD ++Y T++
Sbjct: 336 LRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGL 395
Query: 321 LCKVRELNRLRELVKEMKWKGIVL-NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LC+ + LN +REL+K+M+ +L + TY+ +I L+ G EA +L+EA
Sbjct: 396 LCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKV 455
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSF 437
+ + C+ G ++KA EL+ +M K P + ++L + KLD
Sbjct: 456 DKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAK--- 512
Query: 438 IRLVDQILNTPCK 450
+++ Q+ CK
Sbjct: 513 -KMMQQMYKHHCK 524
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 3/286 (1%)
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
F + R R+ A+++L M G + C+ + + +L + L F + M
Sbjct: 286 FVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELK--KALRFAERMV 343
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
+G +V Y +I+ +V A+ +++QM S G PD V Y V+ + +
Sbjct: 344 LIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLN 403
Query: 259 KAEELFDELLVLG-LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+ EL ++ L+PD TYN I L K + + ++++ E+L K D + Y+ +
Sbjct: 404 EIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAI 463
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ A CK ++ + +ELV EM KG ++ TY+ ++DG G + +A ++++
Sbjct: 464 VHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHC 523
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + GLC+ G +A +++ ++ +P A + ++
Sbjct: 524 KPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVV 569
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 137/339 (40%), Gaps = 54/339 (15%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C P +Y+ V+ L + + +I ++ ++ + LI+ + ++
Sbjct: 382 CSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEA 441
Query: 136 VNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCVDGKTCSLILSS 178
+ + + K F++++V + A E+++ M + G D T + +L
Sbjct: 442 LEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDG 501
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
C L D+ +Q+M K V YT + L + K +A ++N + +
Sbjct: 502 FCRIGKL--DQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWT 559
Query: 239 PDIVCYTMVLNGV-----------IVQEDYVK------------------------AEEL 263
P+ + Y++V++G+ +V+E K A +L
Sbjct: 560 PNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQL 619
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E + G +V + I+G C+++++EA + ++ M PD +TY L+ AL K
Sbjct: 620 LKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAK 679
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+ EL +M +G+V + TY +I KG +
Sbjct: 680 TDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRV 718
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 130/304 (42%), Gaps = 23/304 (7%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
++C+P Y + L N + + +++ E E + TP I ++ H +
Sbjct: 521 HHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSE--EEWWTPNAITYSVV-----VHGLR 573
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
R ++ A +++ MI GF + +L++ S+C RD E
Sbjct: 574 ------------REGKLNEACDVVREMIGKGFFPNPVEINLLVHSLC--RDGKPREANQL 619
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++E G +V++T VI +K+ + AL +L+ M PD V YT +++ +
Sbjct: 620 LKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAK 679
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ +A EL ++L GLVP TY I+ C++ VE +K++ M
Sbjct: 680 TDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQ--TA 737
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN +++ LCK L L+ E+ + +T ++++ + G + A +
Sbjct: 738 YNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMF 797
Query: 374 NKGL 377
N+ L
Sbjct: 798 NRNL 801
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 132/265 (49%), Gaps = 3/265 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ GF VD T +LI+++ CE+ + + + F ++ K+G +++Y+++I L K+
Sbjct: 270 MMERGFVVDNATLTLIITAFCEKSLV--NRAVWFFHKVTKMGLSPNLINYSSMISGLCKR 327
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL-GLVPDVYT 278
V A +L +M +G KP++ +T +++G+ + +A LF +L+ P+V+T
Sbjct: 328 GSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHT 387
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y I+G CK+ + + M+E G P+ TY TL+ CK ++ EL++ M
Sbjct: 388 YTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMS 447
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+G N TY+ ++DGL +G EA LL + + I C+R +
Sbjct: 448 NEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMN 507
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+AL L +M P ++ L+
Sbjct: 508 QALVFLNKMFKVGFQPDIHLYTTLI 532
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 147/301 (48%), Gaps = 4/301 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M+ +G+ + T + ++ +C ++ + F++ ++ + + YT +
Sbjct: 333 AFELLEEMVKNGWKPNVYTHTSLIHGLC-KKGWTERAFRLFLKLIRSDNYKPNVHTYTAM 391
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+EK+ A + +MK G+ P+ YT +++G ++ KA EL + + G
Sbjct: 392 ISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGF 451
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYN ++GLCK+ E K++ + + D +TY L+ CK ++N+
Sbjct: 452 FPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALV 511
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M G ++ Y+ +I + + ++ L +E + GL + ICG C
Sbjct: 512 FLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC 571
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ V A++ ++M+D +P + + AL+ L S+LD + ++D+ L +PC+
Sbjct: 572 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGL-SPCE 630
Query: 451 M 451
+
Sbjct: 631 V 631
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK----AEELFDELLVLGLVPDV 276
K+ +A+ ++ M++ G+ V T V+N +I+ ++ A +FDE+ G+ PD
Sbjct: 189 KLKEAVDMILDMRNQGL----VLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDS 244
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
TY I G C+ NV + I M E G D T ++ A C+ +NR +
Sbjct: 245 CTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHK 304
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
+ G+ NL YS MI GL +G + +A LLEE + G I GLC++G
Sbjct: 305 VTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGW 364
Query: 397 VRKALEL-LKQMADKDVSPGARVWEALL 423
+A L LK + + P + A++
Sbjct: 365 TERAFRLFLKLIRSDNYKPNVHTYTAMI 392
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 36/235 (15%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A + ++M + G+ PD Y ++ G + ++A+ E++ G V D T + I
Sbjct: 228 AGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 287
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM---KWKG 341
C+++ V + + ++G P++I Y++++ LCK + + EL++EM WK
Sbjct: 288 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 347
Query: 342 IVL---------------------------------NLQTYSIMIDGLASKGDIIEACGL 368
V N+ TY+ MI G + + A L
Sbjct: 348 NVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEML 407
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E +GL ++ + I G C+ G KA EL++ M+++ P + +++
Sbjct: 408 FERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 462
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++LN + DG T ++++S C++ D+ ++ L F+ +M K+GF + YT +
Sbjct: 474 AFKLLNTGFQNQIEADGVTYTILISEQCKRADM--NQALVFLNKMFKVGFQPDIHLYTTL 531
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + ++ + D+ + +++ G+ P YT ++ G ++ A + F ++ G
Sbjct: 532 IAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGC 591
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD +Y I+GLCK++ ++ ++ M + G P +T TL CK +
Sbjct: 592 APDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMV 651
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+++ + K L ++T +I L + + A + L+K
Sbjct: 652 ILERLNKK---LWIRTVHTLIRKLCCEKKVALAALFFHKLLDK 691
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 142/300 (47%), Gaps = 4/300 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + A ++L M+N G +D T ++++ C+ + DE + +M K GF +
Sbjct: 471 NNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM--DEAIQLRDDMIKRGFKPDLF 528
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ + + KV + L +L+QMKS+G+KPDIV Y +++G +D KA E EL
Sbjct: 529 TFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTEL 588
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ GL P+ YN I G + N+ I ++ M+ G +P +TYN+L+ +C +
Sbjct: 589 MKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLV 648
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++ + + K I L + Y+I+I G G I EA +E ++G+ +
Sbjct: 649 EEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTL 708
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
+ + G +A +L +M + P + + L+ V LD + S + Q+L
Sbjct: 709 MFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVL 768
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 107/215 (49%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G + +I L + + +A +L M + G++ D + Y +++ G +A
Sbjct: 452 GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEA 511
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+L D+++ G PD++T+N++++ C VE + ++ M+ G KPD++TY T++
Sbjct: 512 IQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDG 571
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
CK +++++ E + E+ G+ N Y+ +I G G+I +A G+L+ G+
Sbjct: 572 YCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPT 631
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
++ + +C GLV + + Q KD+ G
Sbjct: 632 PVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELG 666
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 163/367 (44%), Gaps = 27/367 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFE-TP-EFIFIDLIKTYADAHRFQDS 135
P + +I LA QF ++ +VL ++ + F TP E I+ ++I + ++
Sbjct: 279 PSIVTFGILISGLARGQQFGEVGAVL---QEMQGFGITPNEVIYNEMIGWHCRKGHCSEA 335
Query: 136 VNLF--------------YKIPKFRINRVG---FAIEILNCMINDGFCVDGKTCSLILSS 178
+ LF Y + + + G A +IL+ M+ G V CSL S
Sbjct: 336 LKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVH---CSLFNSV 392
Query: 179 VCEQRDLSS--DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
V + D +L ++EM T I+ L K K +A I Q+ G
Sbjct: 393 VAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKG 452
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ ++ +++G+ + +A ++ ++ G+ D TYN+ I G CK + ++ I
Sbjct: 453 LGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAI 512
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G KPD+ T+N L C + ++ + L+ +MK +G+ ++ TY +IDG
Sbjct: 513 QLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGY 572
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
D+ +A L E + GL + +++ I G + G + A+ +L M + P
Sbjct: 573 CKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTP 632
Query: 417 RVWEALL 423
+ +L+
Sbjct: 633 VTYNSLM 639
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV-PDVYTYNVYINGLCKQ 289
++ + G P I ++++ + A ++F E+ V PDV+TY I LC+
Sbjct: 165 ELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRA 224
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
++A M+A + G +P V+TYN L+ ALCK + L M + ++ T+
Sbjct: 225 GEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTF 284
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
I+I GLA E +L+E G+ +++E I C++G +AL+L +M
Sbjct: 285 GILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVS 344
Query: 410 KDV 412
K +
Sbjct: 345 KGI 347
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 10/223 (4%)
Query: 228 ILNQMKSDG--IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ +M+ DG + PD+ YT ++ + + A + EL G+ P V TYNV ++
Sbjct: 197 VFGEMR-DGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDA 255
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LCK VE ++ M E +P ++T+ L+ L + ++ + +++EM+ GI N
Sbjct: 256 LCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPN 315
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
Y+ MI KG EA L +E ++KG+ ++ LC+ G + A ++L
Sbjct: 316 EVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILD 375
Query: 406 QMADKDVSPGARVWEALL---LSSVSKLDFVNTSFIRLVDQIL 445
+M + ++ +++ L +LD V +RL+ ++L
Sbjct: 376 EMLLAGMMVHCSLFNSVVAWHLRGTGRLDLV----LRLIREML 414
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 125/266 (46%), Gaps = 5/266 (1%)
Query: 161 INDGFCV--DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
+ DG V D T + ++ ++C ++ D + E+++ G +V Y ++ +L K
Sbjct: 201 MRDGKTVAPDVHTYTAMIKALCRAGEI--DAAFAMLAELRRSGIQPTVVTYNVLMDALCK 258
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+V +A + +M ++P IV + ++++G+ + + + + E+ G+ P+
Sbjct: 259 SGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVI 318
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I C++ + +K+ M G K V+TYN + +ALCK E+ +++ EM
Sbjct: 319 YNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEML 378
Query: 339 WKGIVLNLQTY-SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
G++++ + S++ L G + L+ E L + L ++ I LC+ G
Sbjct: 379 LAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKH 438
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
+A E+ Q+ K + AL+
Sbjct: 439 EEAAEIWFQVLGKGLGVNVATSNALI 464
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 130/312 (41%), Gaps = 58/312 (18%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y+ +I+ + S+ + + D + KR F+ F F + TY + + ++ ++L
Sbjct: 495 YNIMIQGCCKASKMDEAIQLRDDMIKR-GFKPDLFTFNIFLHTYCNLGKVEEILHL---- 549
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLG 201
L+ M ++G D T I+ C+ +D+ ++E ++ E+ K G
Sbjct: 550 --------------LDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANE---YLTELMKNG 592
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP---------------------- 239
V Y +I + + DA+GIL+ MK +GI+P
Sbjct: 593 LRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVK 652
Query: 240 -------------DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
++ YT+++ G +A F E+ G+ P+ TY +
Sbjct: 653 AVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAY 712
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
K N E K+ M LG PD ++YNTL+ C+V L+++ E EM + + +
Sbjct: 713 SKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDG 772
Query: 347 QTYSIMIDGLAS 358
+Y+ +DG+ +
Sbjct: 773 CSYNAFVDGITT 784
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMK-WKGIVLNLQTYSIMIDGLASKGDIIE 364
G+ P + T + L++AL +L+ R++ EM+ K + ++ TY+ MI L G+I
Sbjct: 170 GASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDA 229
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A +L E G+ ++ + LC+ G V +A L +M + V P + V +L+
Sbjct: 230 AFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRP-SIVTFGILI 288
Query: 425 SSVSK 429
S +++
Sbjct: 289 SGLAR 293
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +IR L + +V DAL +L+ M G +P++V YT++L + + +A + DE+
Sbjct: 145 YTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMR 204
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P++ TYNV ING+C++ V+ ++ + G +PD ++Y TLL+ LC + +
Sbjct: 205 AKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWD 264
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ EL EM K + N T+ ++I G + A +L++ T +++ + I
Sbjct: 265 DVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVI 324
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+C++G V A + L M +P + +L
Sbjct: 325 NSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVL 359
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 170/392 (43%), Gaps = 57/392 (14%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C+P Y +++ + +NS F +VLD E R TP + ++I
Sbjct: 163 SLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLD--EMRAKGCTPNIVTYNVI-- 218
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+N R RV A ++LN + + G D + + +L +C +
Sbjct: 219 ----------INGM-----CREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRW 263
Query: 186 SSDELLGFVQEMKK-------------LGFC-FGMVD--------------YTN------ 211
E L F + M+K FC GMV+ TN
Sbjct: 264 DDVEEL-FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNI 322
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI S+ K+ +V DA LN M S G PD + YT VL G+ E + A+EL E++
Sbjct: 323 VINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNN 382
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+ T+N +I LC++ +E I +I M+E G V+TYN L+ C ++
Sbjct: 383 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSAL 442
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL + M K N TY+ ++ GL + + A L+ E L++ F+ +
Sbjct: 443 ELFRSMPCKP---NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFF 499
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
CQ+G + +A+EL++QM + +P + L
Sbjct: 500 CQKGFLDEAIELVEQMMEHGCTPNLITYNTLF 531
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 139/275 (50%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A+ +L+ M+ G + T +++L ++C+ ++ + + EM+ G +V
Sbjct: 157 RVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGF--EQAMAVLDEMRAKGCTPNIVT 214
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I + ++ +V DA +LN++ S G +PD V YT +L G+ + + EELF E++
Sbjct: 215 YNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMM 274
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+P+ T+++ I C+ VE I+++ M E + N ++ ++CK ++
Sbjct: 275 EKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVD 334
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ + M G + +Y+ ++ GL +A LL+E + F+ I
Sbjct: 335 DAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFI 394
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C LCQ+GL+ +A+ L++QM + + G + AL+
Sbjct: 395 CILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALV 429
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 162/394 (41%), Gaps = 59/394 (14%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL+ Y C+P +Y ++K L + ++ D+ + + ++ N E F LI+ +
Sbjct: 234 LLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEK-NCMPNEVTFDMLIRFF 292
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R V AI++L M + C+++++S+C+Q +
Sbjct: 293 C------------------RGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRV- 333
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA--------------------- 225
D+ F+ M G + YT V++ L + E+ DA
Sbjct: 334 -DDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT 392
Query: 226 --------------LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+ ++ QM+ G +V Y ++NG VQ A ELF +
Sbjct: 393 FICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---P 449
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P+ TY + GLC ++A +++A M P+V+T+N L+ C+ L+
Sbjct: 450 CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAI 509
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
ELV++M G NL TY+ + DG+ +A LL ++KG+ F I L
Sbjct: 510 ELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGIL 569
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ V +A+++ D + P A V+ +LL
Sbjct: 570 SKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLG 603
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 25/333 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L++ Y C P +Y V+K L ++ D +L + R N E F I
Sbjct: 339 FLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEM-VRNNCPPNEVTFNTFICIL 397
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------- 170
+ ++ L I + + + + N ++N GFCV G
Sbjct: 398 CQKGLIEQAIML---IEQMQEHGCTVGVVTYNALVN-GFCVQGHIDSALELFRSMPCKPN 453
Query: 171 --TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + +L+ +C L D V EM +V + ++ +K + +A+ +
Sbjct: 454 TITYTTLLTGLCNAERL--DAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIEL 511
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+ QM G P+++ Y + +G+ A EL L+ G+ PDV T++ I L K
Sbjct: 512 VEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSK 571
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
++ VE I+M +++G +P + YN +L LCK E++ + + M G + N T
Sbjct: 572 EDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNEST 631
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
Y I+I+GLA +G + EA LL ++G+ +++
Sbjct: 632 YIILIEGLAREGLLKEAQDLLSMLCSRGVVSKN 664
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 128/275 (46%), Gaps = 6/275 (2%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG D C+ ++ ++C +R +SD ++ + G + Y ++ + +
Sbjct: 69 DGEAPDVYLCTKLIRNLC-RRGRTSDAAR-VLRAAEGSGSPVDVFAYNTLVAGYCRYGHL 126
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
A ++ M + PD YT ++ + + A L D++L G P+V TY V
Sbjct: 127 DAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVL 183
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
+ +CK + E + ++ M G P+++TYN ++ +C+ ++ R+L+ + G
Sbjct: 184 LEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGC 243
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ +Y+ ++ GL + + L E + K FD I C+ G+V +A++
Sbjct: 244 QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQ 303
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+L+QM + + + + ++++S+ K V+ +F
Sbjct: 304 VLQQMTEHECATNTTLCN-IVINSICKQGRVDDAF 337
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 118/227 (51%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ K G +V + ++ +K + + + + M + G++PD+ Y++++NG+ +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESK 221
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A +LFDE+L GLVP+ T+ I+G CK ++ +++ M G PD ITYNT
Sbjct: 222 MDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNT 281
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK +L + ++L EM KG+ + TY+ +IDG +GD+ A + + +
Sbjct: 282 LIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + I GLC+ G A ++L++M + P + ++
Sbjct: 342 IRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVM 388
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 103/199 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ +A + ++M G+ P+ V +T +++G A E++ ++L
Sbjct: 209 YSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD TYN I GLCK+ ++ + M G KPD ITY TL+ CK +L
Sbjct: 269 SQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ +Y+ +I GL +G ++A +L E L+ GL + + +
Sbjct: 329 TAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVM 388
Query: 389 CGLCQRGLVRKALELLKQM 407
C+ G V+ +LLK+M
Sbjct: 389 HEFCKNGDVKMGSKLLKEM 407
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 97/178 (54%), Gaps = 1/178 (0%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ +FD + GL P V ++N +NG K +++ G ++ + M G +PDV TY+ L+
Sbjct: 155 AQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK +++ +L EM +G+V N T++ +IDG G + A + ++ L++G
Sbjct: 215 GLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSP 274
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I GLC++G + +A +L +M+ K + P + L+ S + D + T+F
Sbjct: 275 DXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGD-LETAF 331
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ + M G D T S++++ +C++ + DE EM G V +T
Sbjct: 190 GFRLK--SAMHASGVQPDVYTYSVLINGLCKESKM--DEAHKLFDEMLDRGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K K+ A+ I QM S G PD + Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D ++Y L+ LCK
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+I++ GD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDG 411
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ E+L +Y +N+ ++ CK+ + + + + G +P V+++NTL+
Sbjct: 123 FYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M G+ ++ TYS++I+GL + + EA L +E L++GL
Sbjct: 183 KLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G + A+E+ KQM + SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDL 292
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 2/191 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + M++ G +G T + ++ C+ L D + ++M GF + Y +
Sbjct: 225 AHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKL--DLAMEIYKQMLSQGFSPDXITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A + ++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D +Y I+GLCK+ KM+ M +G KPD TY ++ CK ++ +
Sbjct: 343 RLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSK 402
Query: 333 LVKEMKWKGIV 343
L+KEM+ G V
Sbjct: 403 LLKEMQRDGHV 413
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
++ A+EI M++ GF D T + ++ +C++ DL + L EM G +
Sbjct: 255 GKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDL--XDEMSMKGLKPDKI 312
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K+ + A +M + I+ D V YT +++G+ + V AE++ E+
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREM 372
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
L +GL PD TY + ++ CK +V+ G K++ M+ G P VIT
Sbjct: 373 LSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%), Gaps = 10/299 (3%)
Query: 130 HRFQDSVNLFYKIPKFRINRVGFAIEILNC----MINDGFCVDGKTCSLILSSVCEQRDL 185
H F SV + ++ ++R G I+ LNC M+NDG + + + ++++ C+ ++
Sbjct: 149 HEFSLSVTSYNRL-FMVLSRFGL-IDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNV 206
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ + + K GFC YT++I K ++ DA + M +G + V YT
Sbjct: 207 VVAK--AYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYT 264
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++G +A ELF ++ G PDV TY V + C+ +K M E
Sbjct: 265 NLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVEN 324
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G +P+V TY L+ CKV +++ E++ M KG+V ++ ++ +IDG +G + +A
Sbjct: 325 GIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDA 384
Query: 366 -CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C L LNK +C S ++E ICG C++ + +A+ LL +M + +SP + L+
Sbjct: 385 ICVLDSMKLNK-VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLI 442
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GFC D T + ++ C+ +L + + M + G V YTN+I + K+
Sbjct: 220 GFCCDSFTYTSLILGYCKIHELG--DAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKID 277
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+AL + QMK DG PD+ YT+++ +A + F+E++ G+ P+VYTY V I
Sbjct: 278 EALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLI 337
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ CK ++ G++M++ M E G V+ +N L+ CK + ++ MK +
Sbjct: 338 DYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVC 397
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N +TY+ +I G K + A LL + L ++ I GLC+ +V A L
Sbjct: 398 PNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRL 457
Query: 404 LKQMADKDVSPGARVWEALL 423
M P R + A +
Sbjct: 458 HHLMIKDGFVPDQRTFCAFI 477
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 161/352 (45%), Gaps = 21/352 (5%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYK---------IPKFRINRVGF--------AIEILN 158
E + +LI + + + +++ LF++ +P + + F A++
Sbjct: 260 EVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFE 319
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M+ +G + T ++++ C+ + DE + + M + G +V + +I K
Sbjct: 320 EMVENGIEPNVYTYTVLIDYFCKVGKM--DEGMEMLSTMLEKGLVSSVVPFNALIDGYCK 377
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ + DA+ +L+ MK + + P+ Y ++ G ++ +A L +++ L P++ T
Sbjct: 378 RGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVT 437
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I+GLCK V++ ++ M + G PD T+ + LCK+ ++ + ++ + +K
Sbjct: 438 YNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLK 497
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
K N Y+ +IDG +A L + L +G S F+ + GL + G V
Sbjct: 498 EKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVE 557
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
A+ L+ M D P + L+ + + DF + +DQ++++ C+
Sbjct: 558 DAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANM--FLDQMISSGCQ 607
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ +LN M + + T + ++ +C+ R + S L + M K GF +
Sbjct: 419 AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHL--MIKDGFVPDQRTFCAF 476
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K KV A + +K + + YT +++G E + A LF +L G
Sbjct: 477 IDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGC 536
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ T+NV ++GL K+ VE + ++ M + +KP V TY L++ + + + +R
Sbjct: 537 FPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANM 596
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M G N+ TY+ I +G ++EA ++ + +G+ S ++D +
Sbjct: 597 FLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYG 656
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + A +L +M D P + + LL
Sbjct: 657 CIGQLDSAFGVLIRMFDTGCEPSRQTYSILL 687
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 132/300 (44%), Gaps = 36/300 (12%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGF--CF-GMVDYTNVIRSLVKKEKVFDALGILNQ 231
++ C+ S LL K++ F CF + + ++ L K+ KV DA+ +++
Sbjct: 511 LIDGYCKAEKFSDAHLL-----FKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDV 565
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M KP + YT+++ ++ + D+ +A D+++ G P+V TY +I C+Q
Sbjct: 566 MGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGR 625
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ +M+ ++E G D Y+ L+ A + +L+ ++ M G + QTYSI
Sbjct: 626 LLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSI 685
Query: 352 MIDGLASKGDIIEACG--------------------------LLEEALNKGLCTQSSMFD 385
++ L + E G L E+ + +G + +
Sbjct: 686 LLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYS 745
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ I GLC+ + A L M + +SP + + LLSS KL ++ +RL+D ++
Sbjct: 746 KLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNS-LLSSCCKLG-MHEEALRLLDSMM 803
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 126/292 (43%), Gaps = 4/292 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI +L+ M + C + +T + ++ C ++ S D + + +M + +V Y +
Sbjct: 384 AICVLDSMKLNKVCPNSRTYNELICGFCRKK--SMDRAMALLNKMYENKLSPNLVTYNTL 441
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K V A + + M DG PD + ++ + +A ++F+ L
Sbjct: 442 IHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHA 501
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ + Y I+G CK + M G P+ IT+N LL L K ++
Sbjct: 502 EANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMS 561
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LV M + TY+I+I+ + + D A L++ ++ G + I C
Sbjct: 562 LVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYC 621
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
++G + +A E++ ++ ++ + + +++ L+ + +LD IR+ D
Sbjct: 622 RQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFD 673
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 149/371 (40%), Gaps = 57/371 (15%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCV 167
K ++ E EF++ LI Y A +F D+ LF ++ + F I ++ DG
Sbjct: 497 KEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRM----LFEGCFPNSITFNVLLDGLRK 552
Query: 168 DGK---------------------TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+GK T ++++ + + D + F+ +M G +
Sbjct: 553 EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANM--FLDQMISSGCQPNV 610
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN--GVIVQEDYVKAEELF 264
V YT I++ ++ ++ +A ++ ++K +GI D Y +++N G I Q D A +
Sbjct: 611 VTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLD--SAFGVL 668
Query: 265 DELLVLGLVPDVYTYNVYINGLC--KQNNVEAGIKMIAC--------------------- 301
+ G P TY++ + L K N G+ + +
Sbjct: 669 IRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITML 728
Query: 302 ---MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M E G P+V TY+ L++ LCKV L+ L MK GI + ++ ++
Sbjct: 729 FEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCK 788
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G EA LL+ + + +CGL ++G KA E+ + + + V
Sbjct: 789 LGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVV 848
Query: 419 WEALLLSSVSK 429
W+ LL V K
Sbjct: 849 WKVLLDGLVRK 859
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 130/291 (44%), Gaps = 36/291 (12%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
L+ MI+ G + T + + + C Q R L ++E+ V ++K+ G Y ++
Sbjct: 597 FLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEM---VVKIKEEGILLDSFIYDVLVN 653
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE------------------- 255
+ ++ A G+L +M G +P Y+++L +I ++
Sbjct: 654 AYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDN 713
Query: 256 -------DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
D+ LF++++ G VP+V TY+ I GLCK ++ ++ M+E G
Sbjct: 714 ANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGIS 773
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P +N+LL + CK+ L+ M + +L++Y +++ GL +G+ +A
Sbjct: 774 PSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKA--- 830
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKA-LELLKQMADKDVSPGARV 418
E + + L + +DE + + GLVRK ++ Q+ D G R+
Sbjct: 831 --EEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRL 879
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I+ L K E + A + N MK GI P + +L+ + +A L D ++
Sbjct: 744 YSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMM 803
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK---VR 325
+ + +Y + + GL +Q N E ++ + G D + + LL L + V
Sbjct: 804 EYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVD 863
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIM 352
E ++LR++ M+ G L+ T++++
Sbjct: 864 ECSQLRDI---MEKTGCRLHSDTHTML 887
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
D+ N+ +KI F I + F M+ G + T S ++ +C+ LS L F
Sbjct: 712 DNANI-WKIADFEIITMLFEK-----MVEQGCVPNVNTYSKLIKGLCKVEHLS----LAF 761
Query: 194 --VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
MK+ G + +++ S K +AL +L+ M + Y +++ G+
Sbjct: 762 RLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGL 821
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
Q + KAEE+F LL G D + V ++GL ++ V+ ++ ME+ G +
Sbjct: 822 FEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHS 881
Query: 312 ITYNTLLQAL 321
T+ L Q L
Sbjct: 882 DTHTMLSQEL 891
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 115/218 (52%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ K G +V + ++ +K + + + N M++ G++PD+ Y++++NG+ +
Sbjct: 162 ITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESK 221
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A LFDE+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNT
Sbjct: 222 MDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LCK +L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + +
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ + I GLCQ G A ++L++M + P
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 150/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + + G
Sbjct: 109 EHLMKLKYFKL--VWGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E + KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA + ++M G+ P+ V +T +++G A E++ ++L
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L PD+ TYN I GLCK+ +++ +I M G KPD ITY TL+ CK +L
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E L+ GL + + I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
C++G V +LLK+M P
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + +L EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKMDDANVL--FDEMLDKGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+++
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + G +P V+++NTL+
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +LN L M+ G+ ++ TYS++I+GL + + +A L +E L+KGL
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G +G T + ++ C+ + D + ++M ++ Y +I L KK
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 289
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ A ++++M G+KPD + YT +++G + D A E ++ + D Y
Sbjct: 290 GDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+GLC++ KM+ M +G KP++ TY ++ CK ++ +L+KEM+
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Query: 340 KGIVLNLQT 348
G + ++ T
Sbjct: 410 DGYMPSVVT 418
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 20/290 (6%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A E+ + F VD T ++IL+ C + + + L ++EM + G +
Sbjct: 176 RVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIK--RTPKALEVLKEMVERGINPNLTT 232
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +++ + ++ A +MK + D+V YT V++G V + +A +FDE++
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G++P V TYN I LCK++NVE + M M G +P+V TYN L++ L E +
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFDET 387
R EL++ M+ +G N QTY++MI + ++ +A GL E+ + G C + ++
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK-MGSGDCLPNLDTYNIL 411
Query: 388 ICGLCQRGLVRK-------ALELLKQMADKDVSPGA----RVWEALLLSS 426
I G+ VRK A +LL +M ++ P RV LLL+
Sbjct: 412 ISGM----FVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTG 457
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 1/196 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++++M+S I P + +V KA +LF + G D+ ++N ++ LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K VE ++ + S D +TYN +L C ++ + E++KEM +GI NL
Sbjct: 173 KSKRVEKAYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ M+ G G I A E + + + G G +++A + +M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 408 ADKDVSPGARVWEALL 423
+ V P + A++
Sbjct: 292 IREGVLPSVATYNAMI 307
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + M+ G+ + T ++++ + + S E L +Q M+ G Y +
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEEL--MQRMENEGCEPNFQTYNMM 376
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ---EDYVKAEELFDELLV 269
IR + +V ALG+ +M S P++ Y ++++G+ V+ ED V A +L E++
Sbjct: 377 IRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVE 436
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G +P +T+N +NGL N +++ + GS+
Sbjct: 437 RGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSGSR 475
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 143/276 (51%), Gaps = 12/276 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
A+++ + M++ T + I++ +C+ Q + D+L F++E GF + Y
Sbjct: 558 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE----GFIPSCMTYN 613
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+++ +K+ + AL + +M G+ P++V YT ++NG A + DE+
Sbjct: 614 SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 673
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL DV Y+ I+G CK+ ++E+ + + E+G P+ I YN+++ R+LN +
Sbjct: 674 GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF---RDLNNM 730
Query: 331 RELV---KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ K+M I +L TY+ +IDGL +G ++ A L E L+KG+ F
Sbjct: 731 EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 790
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC +G + A ++L++M K+++P ++ L+
Sbjct: 791 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLI 826
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ ++ A + L + +GF T + I+ ++ ++ D L +EM + G
Sbjct: 586 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI--DSALAVYREMCEFGVSPN 643
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT++I K ++ AL ++M+ G++ D+ Y+ +++G + D A++LF
Sbjct: 644 VVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFF 703
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
ELL +GL P+ YN I+G NN+EA + M D+ TY TL+ L K
Sbjct: 704 ELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEG 763
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L +L EM KGIV ++ T+ ++++GL +KG + A +LEE K + +++
Sbjct: 764 RLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYN 823
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G +++A L +M D+ + P ++ L+
Sbjct: 824 TLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 861
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 141/283 (49%), Gaps = 5/283 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G +D S+I+ +VC++ + S+ L ++EMK+ G+ +T+VI + V + +
Sbjct: 290 GVKLDAGAYSIIIQAVCKKPN--SNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV 347
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+AL + +M + G ++V T ++ G Q + A LF+++ GL P+ TY+V I
Sbjct: 348 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 407
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
G C N+E ++ M+ G P V N+LL+ K +L E G+
Sbjct: 408 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA 467
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ TY+IM+ L G + EAC LL+ +N+G+ +++ I G C++G + A +
Sbjct: 468 -NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 526
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
M +D+ P + L+ + K D + + L DQ+L+
Sbjct: 527 FSDMLARDLKPNVVTYSILIDGNFKKGD--SEKALDLFDQMLS 567
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
E ++C + + F T ++++S +C+ + DE + M G +V Y ++I
Sbjct: 460 EAVDCGVANIF-----TYNIMMSWLCKGGKM--DEACSLLDNMVNQGMVPNVVSYNDMIL 512
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+K + A + + M + +KP++V Y+++++G + D KA +LFD++L L + P
Sbjct: 513 GHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAP 572
Query: 275 DVYTYNVYINGLC-----------------------------------KQNNVEAGIKMI 299
+T+N INGLC K+ N+++ + +
Sbjct: 573 TDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVY 632
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M E G P+V+TY +L+ CK ++ + EM+ KG+ L++ YS +IDG +
Sbjct: 633 REMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKR 692
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
D+ A L E L GL +++ I G + AL K+M + +
Sbjct: 693 RDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRI 745
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 3/264 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MIN G ++ + ++ C Q +L D L ++ + G V Y+ +I
Sbjct: 356 MINCGKPMNLVVATSLMKGYCAQGNL--DSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 413
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ A + QMK +GI P + +L G + + +A +LFDE + G V +++TY
Sbjct: 414 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTY 472
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ ++ LCK ++ ++ M G P+V++YN ++ C+ ++ + +M
Sbjct: 473 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 532
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ + N+ TYSI+IDG KGD +A L ++ L+ + F+ I GLC+ G + +
Sbjct: 533 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 592
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A + LK ++ P + +++
Sbjct: 593 ARDKLKNFLEEGFIPSCMTYNSIV 616
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 3/214 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A++ + M G +D S ++ C++RD+ S + L F E+ ++G +
Sbjct: 658 NRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFF--ELLEVGLSPNRI 715
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++I + AL +M +D I D+ YT +++G++ + V A +L+ E+
Sbjct: 716 VYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 775
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G+VPD+ T++V +NGLC + +E K++ M+ P V+ YNTL+ + L
Sbjct: 776 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 835
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
L EM +G+V + TY I+I+G KGD
Sbjct: 836 KEAFTLHDEMLDRGLVPDDVTYDILING-KFKGD 868
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 110/226 (48%)
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K+ F + ++ + ++ ++ +A+ N M + P + ++L ++ +
Sbjct: 182 KRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMI 241
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+ +L++++++ G+ D +T +V + K+ VE + +E G K D Y+ +
Sbjct: 242 GELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSII 301
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+QA+CK N EL++EMK +G V + T++ +I ++G+++EA L EE +N G
Sbjct: 302 IQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGK 361
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G C +G + AL L ++ + + P + L+
Sbjct: 362 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 407
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Query: 207 VDYTNVI-RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y N++ +LV++ + + + N+M GI D +++ + + +AEE F
Sbjct: 225 VPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFR 284
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E G+ D Y++ I +CK+ N G++++ M+E G P T+ +++ A
Sbjct: 285 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 344
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L +EM G +NL + ++ G ++G++ A L + GL +
Sbjct: 345 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 404
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C G + KA EL QM + P +LL
Sbjct: 405 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 442
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 144/291 (49%), Gaps = 13/291 (4%)
Query: 140 YKIPKFRINRVGFA---IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
Y I + + GFA E+ M + G +D + + ++ C+ ++ L ++E
Sbjct: 448 YSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQL--LEE 505
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV----I 252
MK +G +V Y +V+ L K +++ +A + + KS+GI+ + V Y+ +++G
Sbjct: 506 MKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGR 565
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
V E Y+ EE+ + GL P+VYT+N ++GL K + + M++L P+ I
Sbjct: 566 VDEAYLVMEEMMQK----GLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQI 621
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY L+ LCKVR+ N+ +EM+ +G+ N TY+ MI GLA G++ +A L E
Sbjct: 622 TYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERF 681
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G S+ ++ I GL A +L ++ K S + ALL
Sbjct: 682 RASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALL 732
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 116/233 (49%), Gaps = 1/233 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT++IR+ K ++ D + +M G PD++ ++ V + K LF+
Sbjct: 375 VVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFE 434
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G +PD +Y++ I+ L K ++ M++ G D YNT++ CK
Sbjct: 435 EIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSG 494
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++N+ +L++EMK G + TY ++DGLA + EA L EEA + G+ ++
Sbjct: 495 KVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYS 554
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
I G + G V +A ++++M K ++P W LL + K + +N + +
Sbjct: 555 SLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNC-LLDGLVKAEEINEALV 606
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 5/270 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + +IL M GF TC +++S + R L E +Q M+ F
Sbjct: 3 RTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLI--EAFDLLQMMRHFKFRPA 60
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-ELF 264
YT +I +L + + L + NQM+ G + ++ T ++ V +E V A L
Sbjct: 61 FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIR-VFSREGRVDAALSLL 119
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+ D+ YNV I+ K V+ K M+ G PD +TY +++ LCK
Sbjct: 120 DEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKA 179
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L+ E+ ++M+ V Y+ MI G S G EA LLE KG +
Sbjct: 180 NRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAY 239
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSP 414
+ + L ++G KAL + ++M +D P
Sbjct: 240 NCILTCLGKKGKTDKALRIFEEM-KRDAMP 268
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 1/195 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++EM + G + + ++ LVK E++ +AL MK P+ + Y ++
Sbjct: 567 DEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCIL 626
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ + KA + E+ GL P+ TY I+GL K NV + G
Sbjct: 627 INGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGG 686
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD +YN +++ L +L +E + KG ++ +T ++D L K + +E
Sbjct: 687 IPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDAL-HKAECLEQAA 745
Query: 368 LLEEALNKGLCTQSS 382
++ L + +Q +
Sbjct: 746 IVGAVLRETAKSQHA 760
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 4/243 (1%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNV--IRSLVKKEKVFDALGILNQMKSDGIKPD 240
R + D L + EM GF G +YT V + S VK K+ +A +L M+ +P
Sbjct: 3 RTRNFDYLEQILGEMSIAGF--GPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
YT ++ + + + LF+++ LG +V+ I ++ V+A + ++
Sbjct: 61 FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M+ D++ YN + KV +++ + EMK G+V + TY+ M+ L
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+ EA + E+ + ++ I G G +A LL++ K P +
Sbjct: 181 RLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYN 240
Query: 421 ALL 423
+L
Sbjct: 241 CIL 243
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 152/319 (47%), Gaps = 27/319 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV--------------GFAIE 155
++F LI Y ++ +D++ + +++P +V GF E
Sbjct: 67 YVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEE 126
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
L C G+ ++++ + C++ ++ + + K G +V + ++
Sbjct: 127 SLEC----GYPASLYFFNILMHNFCKEGEIRLAQ--SVFDSITKWGLRPSVVSFNTLMNG 180
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+K + + + + M++ G++PD+ +++++NG+ + A ELFDE+L GLVP+
Sbjct: 181 YIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPN 240
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L + +L+
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLID 300
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG+ + TY+ +IDG +GD+ A + + + + + I GLCQ G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEG 360
Query: 396 LVRKALELLKQMADKDVSP 414
A ++L++M + P
Sbjct: 361 RSVDAEKMLREMLSVGLKP 379
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
++ +I L K+ K+ DA + ++M +G+ P+ V +T +++G A E++ ++L
Sbjct: 209 HSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L+PD+ TYN I GLCK+ +++ +I M G KPD ITY TL+ CK +L
Sbjct: 269 SQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E L+ GL + + I
Sbjct: 329 TAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
C++G V +LLK+M P
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRXGYXP 414
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ + M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--SVMQASGVQPDVYTHSVLINGLCKESKM--DDANELFDEMLBNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D + +L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXG 411
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ CK+ + + + + G +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ T+S++I+GL + + +A L +E LB GL
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ +QM + + P + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDL 292
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+B+G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYRQMLSQSLLPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G N T
Sbjct: 403 LLKEMQRXGYXPNXVT 418
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
IL+S+ + S+ +L ++M LG + VI S +V +L ++
Sbjct: 80 ILTSIANMKHYST--VLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFK 137
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +PD +T ++ G+ V+ +A LFD+++ G P+ TY I+GLCK N A
Sbjct: 138 LGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRA 197
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
I+++ M + +P+VITYNT++ L K R++N + EM KGI N+ TY+ +I
Sbjct: 198 AIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIH 257
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL + L+ E ++ + +F + LC+ G+V A +++ M + V P
Sbjct: 258 GLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEP 317
Query: 415 GARVWEALL 423
+ AL+
Sbjct: 318 DVVTYTALM 326
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 168/376 (44%), Gaps = 23/376 (6%)
Query: 68 LHSFS-IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE--FIFIDLIK 124
L SF+ + + +PPP F K L + S+VL ++ ++ P + +I
Sbjct: 59 LSSFNRMLHMQPPPSVVDFA-KILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVIN 117
Query: 125 TYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCV 167
++ +R ++ KI K ++G A+ + + M+ +GF
Sbjct: 118 SFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQP 177
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+G T ++ +C+ + S + ++ M + ++ Y +I L K +V +AL
Sbjct: 178 NGVTYGTLIHGLCKVGN--SRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALN 235
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
I ++M + GI P++ Y +++G+ ++ L +E++ ++P+V + ++ LC
Sbjct: 236 IFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALC 295
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K+ V ++ M + G +PDV+TY L+ C E++ ++ M KG N+
Sbjct: 296 KEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVI 355
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+YS +I+G I +A L EE + L ++ I GLC G +R A+ L +M
Sbjct: 356 SYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEM 415
Query: 408 ADKDVSPGARVWEALL 423
P + LL
Sbjct: 416 VASGQIPDLVTYRILL 431
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 144/305 (47%), Gaps = 37/305 (12%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ +V A+ I + MI G + T + I+ +C+ + + + EM
Sbjct: 225 FKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWK--HVATLMNEMVDSKIMP 282
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V +T ++ +L K+ V A +++ M G++PD+V YT +++G ++ + +A+++F
Sbjct: 283 NVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVF 342
Query: 265 DELLVLG-----------------------------------LVPDVYTYNVYINGLCKQ 289
D ++ G LVP++ TYN I+GLC
Sbjct: 343 DTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHV 402
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ I + M G PD++TY LL LCK R L++ ++K ++ + ++Q+Y
Sbjct: 403 GRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSY 462
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+I+IDG+ G++ A L +KGL + I GLC +GL+ +A +L ++M
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNT 522
Query: 410 KDVSP 414
SP
Sbjct: 523 DGCSP 527
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 169/371 (45%), Gaps = 28/371 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKR---ENFETPEFIFIDLI 123
LL S NCEP Y+ +I L ++ Q + ++ + + N T I L
Sbjct: 201 LLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLC 260
Query: 124 KTYADAH-----------RFQDSVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDGK 170
K H + +V +F + + V A ++++ MI G D
Sbjct: 261 KFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVV 320
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++ C + ++ DE M + G ++ Y+ +I K +++ A+ +
Sbjct: 321 TYTALMDGHCLRSEM--DEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFE 378
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M + P+IV Y +++G+ A LF E++ G +PD+ TY + ++ LCK
Sbjct: 379 EMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTR 438
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+++ + M+ +E PD+ +YN ++ +C+V EL +L + KG+ ++ TY+
Sbjct: 439 HLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYT 498
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR-----KALELLK 405
IMI+GL +G + EA L E +N C+ D+ L RG +R A++LL+
Sbjct: 499 IMINGLCLQGLLAEATKLFRE-MNTDGCSP----DDCTYNLITRGFLRNNETLSAIQLLQ 553
Query: 406 QMADKDVSPGA 416
+M + S A
Sbjct: 554 EMLGRGFSADA 564
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + M+ G + + S +++ C+ + + D+ + +EM + +V Y +
Sbjct: 338 ADKVFDTMVRKGCAPNVISYSTLINGYCKIQRI--DKAMYLFEEMCQRELVPNIVTYNTL 395
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L ++ DA+ + ++M + G PD+V Y ++L+ + +A + + L
Sbjct: 396 IHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNL 455
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ +YN+ I+G+C+ +EA + + + G PDV TY ++ LC L +
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATK 515
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +EM G + TY+++ G + + A LL+E L +G +S + L
Sbjct: 516 LFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLS 575
Query: 393 QRGLVRKALELLKQ 406
GL + ++L +
Sbjct: 576 DDGLDQSVKQILHE 589
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 57/134 (42%)
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
N ++ + M + P V+ + +L ++ ++ + + L K+M GI ++ T
Sbjct: 53 NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+I+I+ + +L + G ++ F I GLC G + +AL L +M
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172
Query: 410 KDVSPGARVWEALL 423
+ P + L+
Sbjct: 173 EGFQPNGVTYGTLI 186
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 112/209 (53%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +K + + + N M+ G++PD+ Y++++NG+ + A LFD
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFD 230
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 291 DLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + + P
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLNVGLKP 379
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 150/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + +
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + V G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 XLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E + KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 105/206 (50%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA + ++M G+ P+ V +T +++G A E++ ++L
Sbjct: 209 YSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L PD+ TYN I GLCK+ +++ +I M G PD ITY TL+ CK +L
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E LN GL + + I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
C++G V +LLK+M P
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQVSGVQPDVYTYSVLINGLCKESKM--DDANXLFDEMLDKGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+++
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 112/209 (53%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +K + + + N M++ G++PD+ Y++++NG+ + A ELFD
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFD 230
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GLVP+ T+ I+G CK V+ +++ M D+ITYNTL+ LCK
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKG 290
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + P
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + +
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQPDVYTYSVLINGLCKESKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + D++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ TYS++I+GL + + +A L +E L+ GL
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ KQM + +S + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDL 292
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYKQMLSQSLSADLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G + ++ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 10/270 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG----FVQEMKKLGFCFGMVD 208
A+E+ MI DG C + TC++++ S++ L+G F+ ++++ G +
Sbjct: 442 ALEVFELMICDGICPNVVTCTILVHG------FSNEGLIGEAFLFLDKVRQFGVVPNLCT 495
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K D GI M G PD V Y+++++G + D +A L+ +++
Sbjct: 496 YRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMV 555
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G P+++TY INGLC + + + + M G PD I Y +L+ CK +
Sbjct: 556 DEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMK 615
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E+ +EM+ +G+ + Y+ +I G + + A +EE +NKGL + + I
Sbjct: 616 AALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLI 675
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + G +KA+ + M ++P A++
Sbjct: 676 IGYFKIGDEKKAMVMYNSMLQAGIAPDAKL 705
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 4/288 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R RV A E+ + + GF D S++L C+ DL + +M F
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDL--EICYDLWNDMVHHNFVPD 422
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+Y+++I + + ++ +AL + M DGI P++V T++++G + +A D
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLD 482
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+VP++ TY V INGLCK N + A M + G PD + Y+ ++ K
Sbjct: 483 KVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L L +M +G N+ TY+ +I+GL + E L + + +GL ++
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYT 602
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
I C+R ++ ALE+ ++M + +S + V+ L+ S V +D
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMD 650
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 142/308 (46%), Gaps = 41/308 (13%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ + M GF D + S+++ +C+Q D+ + + + EM + G +V Y+++
Sbjct: 302 AVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYM--LVEMARNGITPNLVSYSSL 359
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L + +V A + ++K G K D + Y++VL+G D +L+++++
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACM------------------------------ 302
VPD Y Y+ I C+ ++ +++ M
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFL 479
Query: 303 -----EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ G P++ TY ++ LCKV + N + + +M +G V + YSI+IDG
Sbjct: 480 FLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFV 539
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDET--ICGLCQRGLVRKALELLKQMADKDVSPG 415
D+ EA L + +++G T+ ++F T I GLC + + + L K M + ++P
Sbjct: 540 KALDLQEAFRLYYKMVDEG--TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPD 597
Query: 416 ARVWEALL 423
++ +L+
Sbjct: 598 RILYTSLI 605
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 1/268 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S+++S L +E + EM+ G Y + L + ++V A L +
Sbjct: 215 SVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQML 274
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G + C+ V++G KA E+FD + G VPDV++Y++ ++GLCKQ +V
Sbjct: 275 CQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDV 334
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
G M+ M G P++++Y++LL LC+ + EL K +K +G + YSI+
Sbjct: 335 LTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIV 394
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ G D+ L + ++ + + I C+ +++ALE+ + M +
Sbjct: 395 LHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGI 454
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRL 440
P V +L+ S + +F+ L
Sbjct: 455 CPNV-VTCTILVHGFSNEGLIGEAFLFL 481
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 150/338 (44%), Gaps = 20/338 (5%)
Query: 106 IEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNC--- 159
+E N TP + + L+ A R + + LF ++ F+ + + ++I + C
Sbjct: 342 VEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQH 401
Query: 160 ------------MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
M++ F D S ++ + C R L E L + M G C +V
Sbjct: 402 LDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLK--EALEVFELMICDGICPNVV 459
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
T ++ + + +A L++++ G+ P++ Y +++NG+ +F ++
Sbjct: 460 TCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADM 519
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G VPD Y++ I+G K +++ ++ M + G+KP++ TY +L+ LC +L
Sbjct: 520 IKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKL 579
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L K M +G+ + Y+ +I + ++ A + E +GL S ++
Sbjct: 580 PEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCL 639
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I G + + A +++M +K ++P + L++
Sbjct: 640 IGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIG 677
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 137/328 (41%), Gaps = 39/328 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L+ M +G + T L +C + + S F+Q + + G+ + V
Sbjct: 232 AQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKS--AWNFLQMLCQRGYPCNSYCFNAV 289
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +V A+ + + MK G PD+ Y+++++G+ Q D + + E+ G+
Sbjct: 290 IHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGI 349
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK------------------------ 308
P++ +Y+ ++GLC+ VE ++ +++ G K
Sbjct: 350 TPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYD 409
Query: 309 -----------PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
PD Y++L+ A C+ R+L E+ + M GI N+ T +I++ G +
Sbjct: 410 LWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFS 469
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
++G I EA L++ G+ + I GLC+ + M + P
Sbjct: 470 NEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTV 529
Query: 418 VWEALLLSSVSKLDFVNTS--FIRLVDQ 443
++ ++ V LD + ++VD+
Sbjct: 530 LYSIIIDGFVKALDLQEAFRLYYKMVDE 557
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 170/373 (45%), Gaps = 24/373 (6%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
E+YH +I++L + QF I +++ ++++ F I + YA A + +++V+ F
Sbjct: 40 ESYHALIESLGKIKQFNVIWNLVTDMKQKGLLNKETFALIS--RRYARARKVKEAVDAFM 97
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
K+ KF G ++ + +L ++C+ R + +L+ +M K
Sbjct: 98 KMEKF------------------GLKIESSDVNRLLDTLCKSRQVERAQLV--FDKMNKR 137
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
GF + YT ++ +++ + + + N+MK +G +PD+V Y +++N Y A
Sbjct: 138 GFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDA 197
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
ELF E+ P + Y INGL + + ++ + G P+ TYN ++ A
Sbjct: 198 IELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGA 257
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C ++ ++ + EM+ G+ + +TY I++ L G A + ++ +G
Sbjct: 258 YCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPS 317
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFI 438
S ++ + C V A+++ QM K + P ++ L+ L SKLD F
Sbjct: 318 VSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQ 377
Query: 439 RLVDQILNTPCKM 451
++D + P ++
Sbjct: 378 EMLDVGIRPPAQL 390
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 153/331 (46%), Gaps = 31/331 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDG 164
L+K HR + LF K+ K + + A+E+ M++D
Sbjct: 413 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 472
Query: 165 --FCVDGK----TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
+ ++ K + S+I+ +C+ DE +EMK LG ++ YT++I +
Sbjct: 473 SPYGINCKPNAISYSIIIDGLCKCG--REDEARELFKEMKALGVIPDVISYTSLIHGFCR 530
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
K DA + N+M G++PD+ ++++++ + + ++A EL + ++ G +P+ T
Sbjct: 531 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 590
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM- 337
Y + GLC + + ++ M++LG PDV+TY TL++ LC+ + EL K+M
Sbjct: 591 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650
Query: 338 -----KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ +YSI+IDGL G EA L +E G+ + I G C
Sbjct: 651 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 710
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + A L +M D+ V A + ++
Sbjct: 711 RSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 741
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 139/281 (49%), Gaps = 8/281 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M+ G +D T S ++ +C + +S E MKKLG + Y +
Sbjct: 29 ANELLEVMVQRGCILDIVTYSTLIKGLCMKHRIS--EATQLFMSMKKLGCRPDAIAYGTL 86
Query: 213 IRSLVKKEKVFDALGILNQMKSD----GIK--PDIVCYTMVLNGVIVQEDYVKAEELFDE 266
++ L + K+ AL + +M +D GIK P +V Y+++++G+ +A ELF E
Sbjct: 87 MKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKE 146
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G++PDV +Y I+G C+ E + M ++G + DV T + L+ LCK +
Sbjct: 147 MKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGK 206
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ EL++ M +G +L++ TYS +I GL K I EA L G + +
Sbjct: 207 VIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGT 266
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ GLCQ G + AL+L ++M + G + L+ S+
Sbjct: 267 LMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSI 307
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 134/261 (51%), Gaps = 8/261 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L +I G D TC+ ++ +C + +S L F++ M+KLG +V +
Sbjct: 391 ANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQL-FLK-MQKLGCMPNVVTCATL 448
Query: 213 IRSLVKKEKVFDALGILNQMKSD----GI--KPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
++ L + + AL + M SD GI KP+ + Y+++++G+ +A ELF E
Sbjct: 449 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE 508
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ LG++PDV +Y I+G C+ + + M ++G +PDV T++ L+ LCK +
Sbjct: 509 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 568
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ EL++ M +G + N TY+ ++ GL I EA L + G +
Sbjct: 569 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 628
Query: 387 TICGLCQRGLVRKALELLKQM 407
+ GLCQ G ++ ALEL K+M
Sbjct: 629 LMKGLCQTGNIKTALELHKKM 649
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 194/438 (44%), Gaps = 71/438 (16%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYN--CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE 110
Q +I H+ +L+ S Y C+P +Y +I L ++ + + + E +
Sbjct: 92 QTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFK--EMKA 149
Query: 111 NFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGF 152
P+ I + LI + + +++ + LF ++ I +V
Sbjct: 150 QGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIE 209
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG-----FCFG-- 205
A E+L MI G +D T S ++ +C + +S E M+KLG +G
Sbjct: 210 ANELLEVMIQRGCILDIVTYSTLIKGLCMKHRIS--EATRLFMSMQKLGCRPDAIAYGTL 267
Query: 206 ----------------------------------MVDYTNVIRSLVKKEKVFDALGILNQ 231
++ Y+ +I L K + +A + +
Sbjct: 268 MKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKE 327
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
MK+ GI PD++ YT +++G + + KA+ LF+E+L +G+ PDV T +V I+ LCK+
Sbjct: 328 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 387
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
V K++ + + G PDV+T TL++ LC +++ +L +M+ G + N+ T +
Sbjct: 388 VIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 447
Query: 352 MIDGLASKGDIIEACGLLEEALNK----GL-CTQSSM-FDETICGLCQRGLVRKALELLK 405
++ GL G+I A L + L+ G+ C +++ + I GLC+ G +A EL K
Sbjct: 448 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 507
Query: 406 QMADKDVSPGARVWEALL 423
+M V P + +L+
Sbjct: 508 EMKALGVIPDVISYTSLI 525
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 45/306 (14%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFE-------TPEFI-FIDLIKTY 126
NC+P +Y +I L + + E RE F+ P+ I + LI +
Sbjct: 478 NCKPNAISYSIIIDGLCKCGR---------EDEARELFKEMKALGVIPDVISYTSLIHGF 528
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDL 185
+ +++D+ LF N M++ G D T S+++ +C E + +
Sbjct: 529 CRSGKWKDAKYLF------------------NEMVDIGVQPDVTTFSVLIDMLCKEGKVI 570
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
++ELL + M + G V YT +++ L +++ +A + +M+ G PD+V Y
Sbjct: 571 EANELL---EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYG 627
Query: 246 MVLNGVIVQEDYVKAEELFDELLV------LGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++ G+ + A EL ++L PDV +Y++ I+GLCK + ++
Sbjct: 628 TLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELF 687
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M+ LG P+VI+Y +L+ C+ +L + L EM +G+ LN TYS+MI G +
Sbjct: 688 KEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKE 747
Query: 360 GDIIEA 365
G I +A
Sbjct: 748 GQIDKA 753
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K+ KV +A +L M G DIV Y+ ++ G+ ++ +A +LF + LG
Sbjct: 16 LIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 75
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGI----KMIACMEELG--SKPDVITYNTLLQALCKVR 325
PD Y + GLC+ + + +M+ + G KP +++Y+ ++ LCK R
Sbjct: 76 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDR 135
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL---CTQSS 382
+ REL KEMK +G++ ++ +Y+ +I G G +A L E L+ G+ T SS
Sbjct: 136 REDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSS 195
Query: 383 MFDETICGLCQRGLVRKALELLKQMADK 410
M + LC+ G V +A ELL+ M +
Sbjct: 196 MLIDI---LCKEGKVIEANELLEVMIQR 220
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 6/180 (3%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
GI+PD+ ++++ + ++A EL + ++ G + D+ TY+ I GLC ++ +
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM----KWKGIVL--NLQTY 349
++ M++LG +PD I Y TL++ LC+ ++N L +EM GI L +Y
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
SI+IDGL EA L +E +G+ + I G C+ G KA L +M D
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L +G+ PDV T V I+ CK+ V +++ M + G D++TY+TL++ LC
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK----GLCTQSS 382
++ +L MK G + Y ++ GL G I A L +E LN G+ + +
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 383 MFDETIC--GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +I GLC+ +A EL K+M + + P + +L+
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI 163
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%)
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M +G +PDV T L+ CK ++ EL++ M +G +L++ TYS +I GL K
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
I EA L G + + + GLCQ G + AL L ++M + G +
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 422 LLLSSV 427
L+ S+
Sbjct: 121 LVSYSI 126
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 137/280 (48%), Gaps = 4/280 (1%)
Query: 146 RINRVGFAIEILNCMINDGFC--VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
R RV A + M+ G +D + ++ C+ D+ + + MK G
Sbjct: 149 RDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMET--AFAVAERMKAQGVG 206
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y +++ L + +V A +++ MK DG++P++V YTM + + A L
Sbjct: 207 VDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSL 266
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++E++ G++PDV T + + GLCK + ME++G+ P+ +TY L+ L K
Sbjct: 267 YEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAK 326
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ N L+ E+ +G+V++L Y+ ++D L +G I EA + AL+
Sbjct: 327 AQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVT 386
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I LC+ G V A ++L +M +K +SP + +++
Sbjct: 387 YTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSII 426
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 136/267 (50%), Gaps = 2/267 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R N V A + M+ G D T S ++ +C+ S E +EM+K+G
Sbjct: 256 RRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFS--EAYALFREMEKIGAAPN 313
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y +I +L K ++ ++L +L ++ S G+ D++ YT +++ + + +A+++F
Sbjct: 314 HVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFR 373
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L P+ TY V I+ LCK NV+ ++++ MEE P+V+T+++++ L K
Sbjct: 374 HALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRG 433
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + + ++EMK +GI N+ TY +IDG A + E L +G+ + D
Sbjct: 434 WVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVD 493
Query: 386 ETICGLCQRGLVRKALELLKQMADKDV 412
+ GL + G + KA L ++M ++ V
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGV 520
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 151 GFAIE-ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM--V 207
G A E +L M G D T + +L +C RD D + M + G G+ V
Sbjct: 118 GLAPEALLAEMCKRGVPFDAVTVNTVLVGLC--RDGRVDRAAALAEVMVRGGGIGGLDVV 175
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +++ K + A + +MK+ G+ D+V Y ++ G+ + A ++ D +
Sbjct: 176 GWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTM 235
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ P+V TY ++I C++N V+ + M G PDV+T + L+ LCK
Sbjct: 236 KRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRF 295
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L +EM+ G N TY ++ID LA E+ LL E +++G+ M+
Sbjct: 296 SEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTAL 355
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ LC+ G + +A ++ + + +P + L+
Sbjct: 356 MDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLI 391
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 186/463 (40%), Gaps = 127/463 (27%)
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK 144
++ L ++ +F + ++ +EK P + + LI T A A R +S++L ++
Sbjct: 285 LVGGLCKDGRFSEAYALFREMEKIG--AAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVS 342
Query: 145 FRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
+ ++ A ++ ++D +G T ++++ ++C+ ++
Sbjct: 343 RGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDG 402
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
E + + EM++ +V ++++I LVK+ V A + +MK GI P++V Y V
Sbjct: 403 AEQV--LSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTV 460
Query: 248 LNG---VIVQEDYV--------------------------------KAEELFDELLVLGL 272
++G + QE + KAE LF E+ G+
Sbjct: 461 IDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGV 520
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKM-------------------IAC------------ 301
+ D Y I+GL K N+ A K+ I C
Sbjct: 521 LLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAES 580
Query: 302 ----MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M+ G KPD +TYNT++ A + + + +L+ MK I NL TYS +I GL
Sbjct: 581 FLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLF 640
Query: 358 SKGDIIEACGLLEE-----------------------------------ALNKGLCTQSS 382
G + +A LL E +N GLC +
Sbjct: 641 EAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADIT 700
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+++ + LC G+ RKA+ +L++M+ + ++P + AL+L
Sbjct: 701 VYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILG 743
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 7/285 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F V A +LN M + GF T +L + + R SD +L + M G C
Sbjct: 640 FEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGR--RSDLILEIHEWMMNAGLCA 697
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++R L A+ +L +M GI PD + + ++ G A +
Sbjct: 698 DITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTY 757
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
D++L G+ P+V T+N + GL + ++ M++ G +P +TY+ L+ K
Sbjct: 758 DQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQ 817
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L EM KG + + TY+ +I + G + +A L E N+G+ S +
Sbjct: 818 SNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTY 877
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
D + G + + + LK M +K SP LSS+S+
Sbjct: 878 DILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGT-----LSSISR 917
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 155/355 (43%), Gaps = 8/355 (2%)
Query: 70 SFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADA 129
SF E + YH ++ E ++F + S+++ ++K E E +F ++ +
Sbjct: 464 SFKCLGQEAALDVYHEMLCEGVEVNKFI-VDSLVNGLKKNGKIEKAEALFREM----NER 518
Query: 130 HRFQDSVNLFYKIPK-FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD 188
D VN I F+ + A ++ + D ++ ++ +C S
Sbjct: 519 GVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLG--KSK 576
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E F++EM+ G V Y +I + ++ K AL +LN MK IKP+++ Y+ ++
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLI 636
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G+ KA+ L +E+ G P T+ + + + +++ M G
Sbjct: 637 VGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLC 696
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
D+ YNTL++ LC + +++EM +GI + T++ +I G G + A
Sbjct: 697 ADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFST 756
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ L G+ + F+ + GL G + ++ +L +M + + P ++ L+
Sbjct: 757 YDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILV 811
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 2/259 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R +EI M+N G C D + ++ +C + + + + ++EM G +
Sbjct: 679 RSDLILEIHEWMMNAGLCADITVYNTLVRVLC--YNGMTRKAMVVLEEMSGRGIAPDTIT 736
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +I K + +A +QM GI P++ + +L G+ +++ + +E+
Sbjct: 737 FNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMK 796
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P TY++ + G KQ+N +++ M G P V TYN L+ KV ++
Sbjct: 797 KRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMS 856
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ +EL EM+ +G++ TY I++ G + + E L++ KG
Sbjct: 857 QAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSIS 916
Query: 389 CGLCQRGLVRKALELLKQM 407
+ G+ +A LLK +
Sbjct: 917 RAFSKPGMSWEARRLLKNL 935
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D +YNV ++G +Q + A ++A M + G D +T NT+L LC+ ++R L
Sbjct: 102 DTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 335 KEMKWKGIV--LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ M G + L++ ++ ++DG GD+ A + E +G+ ++ + GLC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 393 QRGLVRKALELLKQMADKDVSP 414
+ G V A +++ M V P
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEP 242
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 154/338 (45%), Gaps = 23/338 (6%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY + ++++L D +VLD + R TP + +++ F+ +V
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHV-ILEAACRGGGFRSAV 163
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
A+++L+ G +D C+L++S++CEQ + DE + +++
Sbjct: 164 R---------------ALQVLH---AKGCTLDSGNCNLVVSAICEQGCV--DEGVELLRK 203
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+ G +V Y V++ L ++ D ++ +M G P++ + ++ +
Sbjct: 204 LPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGL 263
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ + E ++ G PD+ Y I+G+CK + E +++ M G KP+V+ YNT
Sbjct: 264 FEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNT 323
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+L+ LC +L+ EM + L+ T++I++D G + LLE+ L G
Sbjct: 324 VLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 383
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ I G C+ GLV +A+ LLK M+ P
Sbjct: 384 CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 120/236 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ +++M + G ++ YT VI K+ V +A+ +L M + G KP+ + YT+V
Sbjct: 370 DRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIV 429
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L G+ E +V A+EL ++ G +P+ T+N IN +CK+ VE I+++ M G
Sbjct: 430 LKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGC 489
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD+I+Y+T++ L K + EL+ M KGI N YS M L+ +G +
Sbjct: 490 SPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQ 549
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + + + +++++ I LC+R +A++ M P + L+
Sbjct: 550 MFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILI 605
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 35/249 (14%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE------- 261
Y +I + K A IL++M S G+KP++VCY VL G+ E + +AE
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345
Query: 262 ----------------------------ELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
EL +++L G +PDV TY ING CK+ V+
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 405
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ ++ M G KP+ I+Y +L+ LC+ +EL+ M +G + N T++ +I
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ + KG + +A LL++ L G + I GL + G +ALELL M +K ++
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGIT 525
Query: 414 PGARVWEAL 422
P ++ ++
Sbjct: 526 PNTIIYSSM 534
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++RSL + + DAL +L++M G ++L + A L
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH 170
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G D N+ ++ +C+Q V+ G++++ + G +PD+++YN +L+ LC + +
Sbjct: 171 AKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWD 230
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ EL+ EM G N+ T++ +I L G + L + G M+ I
Sbjct: 231 DVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATII 290
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+C+ G A ++L +M + P + +L
Sbjct: 291 DGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVL 325
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 103/271 (38%), Gaps = 56/271 (20%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + S C+P +Y V+K L ++ D ++ H+ ++ P
Sbjct: 410 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV---------- 459
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
F +N K V AIE+L M+ +G CS L S
Sbjct: 460 ----TFNTLINFMCK-----KGLVEQAIELLKQMLVNG-------CSPDLIS-------- 495
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
Y+ VI L K K +AL +LN M + GI P+ + Y+
Sbjct: 496 ----------------------YSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSS 533
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ + + + K ++FD + + D YN I+ LCK+ + I A M G
Sbjct: 534 MASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 593
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEM 337
P+ TY L++ L + ++L+ E+
Sbjct: 594 CMPNESTYTILIRGLASEGLVREAQDLLSEL 624
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 95/252 (37%), Gaps = 47/252 (18%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ +IRSL + DA L+ + G +V Y ++ G Y +A ++ +
Sbjct: 48 SALIRSLCAAGRTADAARALD---TAGDAAGVVAYNAMIAG------YCRAGQVAAARRL 98
Query: 270 LGLVP---DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
VP + YTY + LC + + + ++ M G + +L+A C+
Sbjct: 99 AAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGG 158
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE--------------A 372
++ + KG L+ ++++ + +G + E LL + A
Sbjct: 159 FRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNA 218
Query: 373 LNKGLCTQS---------------------SMFDETICGLCQRGLVRKALELLKQMADKD 411
+ KGLC + F+ I LC+ GL + E L QM +
Sbjct: 219 VLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHG 278
Query: 412 VSPGARVWEALL 423
+P R++ ++
Sbjct: 279 CTPDLRMYATII 290
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 190/446 (42%), Gaps = 57/446 (12%)
Query: 14 LRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSI 73
+R+ + L+ W D + + L K Q + + LLHS
Sbjct: 1 MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQF-RTGKVYKDLLHS--- 56
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFE-TPE-FIFIDLIKTYADAHR 131
C P + +I+ N + + L+ + + F P+ +IF LI
Sbjct: 57 -GCSPNLVTFKILIRG---NCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGN 112
Query: 132 FQDSVNLFYKIPKFRINRVGF-----------------AIEILNCMINDGFCVDGKTC-- 172
+V LF + R+N F A E+L MI G GK+
Sbjct: 113 PDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRG----GKSAPD 168
Query: 173 -----SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+LI + +C+ D+ +E L + MK G ++ Y ++I +L +V +A
Sbjct: 169 IVTYNTLINAGICKDGDV--EEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAE 226
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
IL M PD+V + +L+G +A E+ +E+ ++PDV TY + +NGLC
Sbjct: 227 ILKTMSC---SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 283
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI----- 342
+ V+ ++ + G PDVI Y +L+ LCK E+ +LVKEM + I
Sbjct: 284 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMV 343
Query: 343 ----VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
V L TY+I++ GL G I +A L+ + + +G ++ I GLC+ VR
Sbjct: 344 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 403
Query: 399 KALELLKQMAD-----KDVSPGARVW 419
+A +L +MA DV+ G+ V+
Sbjct: 404 EACDLADEMASLGCFPNDVTLGSVVF 429
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 136/289 (47%), Gaps = 11/289 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L M + D T +++++ +C + L ++E+ + G+ ++ YT++
Sbjct: 256 ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL--LEEIVRQGYIPDVIAYTSL 313
Query: 213 IRSLVKKEKV---------FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ L K ++ A IL +M S + P + Y +VL G+I KA L
Sbjct: 314 VDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSL 373
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+L+ G VPDV TYN I+GLCK N V + M LG P+ +T +++ LC+
Sbjct: 374 ISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCR 433
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
V ++ LV EM K N+ Y+ +IDGL + +AC +L+ +G+
Sbjct: 434 VGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFA 493
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ + I + G V +A+ + +M + P + L +++S F
Sbjct: 494 YRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVF 542
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 6/236 (2%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L F++ + + + + +I L K A+ + M+S + PDI Y V++G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141
Query: 251 VIVQEDYVKAEELFDELLVLG--LVPDVYTYNVYIN-GLCKQNNVEAGIKMIACMEELGS 307
+ + KA EL +E++ G PD+ TYN IN G+CK +VE ++++ M+ G
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PDVITYN+++ ALC + E++K M +L T++ ++DG G + A
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTMSCSP---DLVTFNTLLDGFCKAGMLPRALE 258
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+LEE + + + + GLC+ G V+ A LL+++ + P + +L+
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLV 314
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ DG K D+ Y +L+ ++ + +++ +LL G P++ T+ + I G CK
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
++ + ++E PDV +N L+ L K ++ +L + M+ + ++ TY+ +
Sbjct: 79 TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138
Query: 353 IDGLASKGDIIEACGLLEEALNKG------LCTQSSMFDETICGLCQRGLVRKALELLKQ 406
I GL G++ +A LLEE + +G + T +++ + G+C+ G V +ALE+L
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLIN---AGICKDGDVEEALEILDG 195
Query: 407 MADKDVSPGARVWEALL 423
M +P + +++
Sbjct: 196 MKLAGPAPDVITYNSII 212
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 171/353 (48%), Gaps = 17/353 (4%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDIS---SVLDHIEKRENFETPE 116
P I +SL+ +F ++ + E H + K + D++ + +D + K E
Sbjct: 489 NPIIYTSLIRNFFMHGRK---EDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGR 545
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE---ILNCMINDGFCVDGKTCS 173
IF D+ K++ F V Y I + + G A E I M GF +D + +
Sbjct: 546 AIFEDM-KSFG----FLPDVR-SYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYN 599
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ +C+ + D+ ++EMK + Y +++ L K +++ +A + + K
Sbjct: 600 AVVDGLCKSGKV--DKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
S GI+ +++ Y+ +++G +A + +E++ GL P+VYT+N ++ L K ++
Sbjct: 658 SKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEID 717
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ M+E+ P+ TY+ L+ LC+V++ N+ +EM+ +G++ N+ TY+ MI
Sbjct: 718 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMI 777
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
GLA G+I +A L E G S+ F+ I G+ +A ++ ++
Sbjct: 778 SGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEE 830
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 115/236 (48%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ ++M G + YT++IR+ + D I +M G +PD+
Sbjct: 472 DDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTY 531
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ V + K +F+++ G +PDV +Y++ I+GL K + M + G
Sbjct: 532 MDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGF 591
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
D YN ++ LCK ++++ E+++EMK K + + TY ++DGLA + EA
Sbjct: 592 ALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYM 651
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L EEA +KG+ ++ I G + G + +A +L++M K ++P W +L+
Sbjct: 652 LFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ K +V I MKS G PD+ Y+++++G+ + +F + G D
Sbjct: 535 VFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALD 594
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
YN ++GLCK V+ +++ M+ P V TY +++ L K+ L+ L +
Sbjct: 595 ARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFE 654
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
E K KGI LN+ YS +IDG G I EA +LEE + KGL ++ + L +
Sbjct: 655 EAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTE 714
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
+ +AL + M + SP + ++L++ + ++ N +F+
Sbjct: 715 EIDEALICFQSMKEMKCSPNTYTY-SILINGLCRVQKYNKAFV 756
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 153/374 (40%), Gaps = 20/374 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S S C P Y +I L + + D + + + + P I+ LI+ +
Sbjct: 442 IFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANP-IIYTSLIRNF 500
Query: 127 ADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDG 169
R +D ++ ++ + F+ V I M + GF D
Sbjct: 501 FMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDV 560
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
++ S+++ + + + E Q M + GF Y V+ L K KV A +L
Sbjct: 561 RSYSILIHGLTKAG--QARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVL 618
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+MK + P + Y +++G+ + +A LF+E G+ +V Y+ I+G K
Sbjct: 619 EEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKV 678
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
++ ++ M + G P+V T+N+L+ AL K E++ + MK N TY
Sbjct: 679 GRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTY 738
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
SI+I+GL +A +E +GL + I GL + G + A L ++
Sbjct: 739 SILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKT 798
Query: 410 KDVSPGARVWEALL 423
P + + AL+
Sbjct: 799 NGGIPDSASFNALI 812
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++L M + G+ + C+ +++++ R L ++ + M+ L F YT +I
Sbjct: 127 KVLEEMSHLGYGLPNPACAALVATLVRSRRL--EDAFRVIGAMRHLKFRPPFSAYTVLIG 184
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L + + AL +L QM+ G + + +T ++ + + A L DE+ L P
Sbjct: 185 ALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEP 244
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D+ YNV I+ K +V+ K ++ G +PD ++Y +++ LCK L EL
Sbjct: 245 DIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELF 304
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M+ + V Y+ MI G S +A LLE +G F+ + L ++
Sbjct: 305 GQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKK 364
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
V +AL L M KD P + ++
Sbjct: 365 RKVDEALTLFDVM-KKDAKPNISTYNIII 392
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++EM K G + + +++ +LVK E++ +AL MK P+ Y+++
Sbjct: 682 DEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSIL 741
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ + Y KA + E+ GL+P+V TY I+GL K N+ + + G
Sbjct: 742 INGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGG 801
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD ++N L++ + ++ +E + +G LN++T ++D L +K + +E
Sbjct: 802 IPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDAL-NKTECLEQAA 860
Query: 368 LLEEALNK 375
++ L++
Sbjct: 861 IVGAVLSE 868
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ ++ +++ G +V + +++ L KK KV +AL + + MK D KP+I Y ++
Sbjct: 333 DDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNII 391
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ + + +A ++ DE+ + GL P++ + N+ ++ LCK N +E ++ E G
Sbjct: 392 IDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGC 451
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P+ +TY +L+ L K +++ L ++M G N Y+ +I G +
Sbjct: 452 NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHK 511
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +E + +G ++ + + + + G V K + + M P R + L+
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILI 567
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 16/213 (7%)
Query: 228 ILNQMKSDGIK-PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV------PDVYTYN 280
+L +M G P+ C +V V++ L D V+G + P Y
Sbjct: 128 VLEEMSHLGYGLPNPACAALVAT-------LVRSRRLEDAFRVIGAMRHLKFRPPFSAYT 180
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
V I L + E ++++ M+++G + V + TL++AL + ++ LV E+K
Sbjct: 181 VLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGS 240
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
+ ++ Y++ ID G + A E GL + + LC+ G + +A
Sbjct: 241 CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEA 300
Query: 401 LELLKQM-ADKDVSPGARVWEALLLSSVSKLDF 432
EL QM A++DV P A + +++ S F
Sbjct: 301 EELFGQMEAERDV-PCAYAYNTMIMGYGSAERF 332
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S++++ +C R ++ F QEM+K G +V YT +I L K + DA +
Sbjct: 737 TYSILINGLC--RVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFE 794
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ K++G PD + ++ G+ ++A ++F+E + G +V T ++ L K
Sbjct: 795 RFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTE 854
Query: 291 NVEAGIKMIACMEELG 306
+E + A + E+
Sbjct: 855 CLEQAAIVGAVLSEIA 870
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 142/301 (47%), Gaps = 35/301 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF---GMVDY 209
A+ + ++ GF +D + +++ VC+ E +Q ++++ +V Y
Sbjct: 152 ALHFHDKLLAQGFRLDQVSYGTLINGVCK-----IGETRAAIQLLRRIDGRLTEPNVVMY 206
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L K++ V +A + ++M GI ++V Y+ +++G + +A +E+++
Sbjct: 207 NTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVL 266
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA--------- 320
+ PDVY YN ++ L K+ V+ ++A + + KP+VITYNTL+
Sbjct: 267 KAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAV 326
Query: 321 ------------------LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
LCK++ + L KEM K +V N TY+ +IDGL G I
Sbjct: 327 GLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRI 386
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A L++E ++G ++ I GLC+ G + KA+ L+ +M D+ + P L
Sbjct: 387 SYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNIL 446
Query: 423 L 423
L
Sbjct: 447 L 447
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 122/225 (54%), Gaps = 9/225 (4%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I K VF+A+G++ G+ PD+ Y +++N + + +A L+
Sbjct: 308 VITYNTLIDGYAKH--VFNAVGLM------GVTPDVWSYNIMINRLCKIKRVEEALNLYK 359
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +VP+ TYN I+GLCK + +I M + G +VITYN+L+ LCK
Sbjct: 360 EMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNG 419
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE-ACGLLEEALNKGLCTQSSMF 384
+L++ L+ +MK +GI ++ T +I++ GL KG ++ A GL ++ L+KG +
Sbjct: 420 QLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTY 479
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ I G C+ GL+ +A L +M D SP A ++ ++ + + K
Sbjct: 480 NIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEK 524
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +L+++ G +PD V T ++ G+ ++ KA D+LL G D +Y IN
Sbjct: 117 AFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLIN 176
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G+CK A I+++ ++ ++P+V+ YNT++ LCK + ++ L EM KGI
Sbjct: 177 GVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISA 236
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ TYS +I G G + EA G L E + K + +++ + L + G V++A +L
Sbjct: 237 NVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVL 296
Query: 405 KQMADKDVSPGARVWEALL 423
+ + P + L+
Sbjct: 297 AVIVKTCLKPNVITYNTLI 315
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K ++V +AL + +M + P+ V Y +++G+ A +L DE+
Sbjct: 338 YNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMH 397
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL-CKVREL 327
G +V TYN INGLCK ++ I +I M++ G +PD+ T N LL L CK + L
Sbjct: 398 DRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRL 457
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L +++ KG N+ TY+I+I G +G + EA L + + G + F
Sbjct: 458 KNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKII 517
Query: 388 ICGLCQRGLVRKALELLKQM 407
IC L ++G KA +LL +M
Sbjct: 518 ICALLEKGETDKAEKLLCEM 537
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 107/199 (53%), Gaps = 3/199 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I RV A+ + M + T + ++ +C+ +S + EM G
Sbjct: 347 KIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA--WDLIDEMHDRGHHAN 404
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELF 264
++ Y ++I L K ++ A+ ++N+MK GI+PD+ ++L+G++ + +K A+ LF
Sbjct: 405 VITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLF 464
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+LL G P+VYTYN+ I G CK+ ++ + + ME+ G P+ IT+ ++ AL +
Sbjct: 465 QDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEK 524
Query: 325 RELNRLRELVKEMKWKGIV 343
E ++ +L+ EM +G++
Sbjct: 525 GETDKAEKLLCEMIARGLL 543
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 114/228 (50%), Gaps = 3/228 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
G+A + N + G D + +++++ +C+ + + +E L +EM + V Y
Sbjct: 317 GYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRV--EEALNLYKEMHQKNMVPNTVTYN 374
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++I L K ++ A ++++M G +++ Y ++NG+ KA L +++
Sbjct: 375 SLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQ 434
Query: 271 GLVPDVYTYNVYINGL-CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ PD+YT N+ ++GL CK ++ + + + G P+V TYN ++ CK L+
Sbjct: 435 GIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDE 494
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L +M+ G N T+ I+I L KG+ +A LL E + +GL
Sbjct: 495 AYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%)
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
E V DAL ++M P I+ + +L+ + Y L L + + PD +T
Sbjct: 42 ENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTL 101
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ IN C + +++ + + G +PD +T TL++ LC ++ + ++
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G L+ +Y +I+G+ G+ A LL + M++ I LC+R LV +
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSE 221
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L +M+ K +S + A++
Sbjct: 222 ACNLFSEMSVKGISANVVTYSAII 245
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 1/227 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y+ ++ SL K V +AL + + M S GI+PD+V Y +++G+ + +A L
Sbjct: 212 VIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLG 271
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G++P+V T+NV ++ CK + ++ M +G +PDV+TYN+++ C +
Sbjct: 272 NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLS 331
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ ++ + M KG + NL TYS +I G +I +A LL E +N GL +
Sbjct: 332 QMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWS 391
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
I G C+ G A EL M + D P + A++L + K F
Sbjct: 392 TLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTC-AIILDGLFKCQF 437
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 4/280 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A +L M+ G + +T ++++ + C+ +S + ++GF M +G +V Y +
Sbjct: 266 ATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGF---MVHVGVEPDVVTYNS 322
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI ++ DA+ + M G P++V Y+ +++G ++ KA L E++ G
Sbjct: 323 VISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSG 382
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L PDV T++ I G CK EA ++ M E P++ T +L L K + +
Sbjct: 383 LNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAI 442
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L +EM+ + LN+ Y+I++DG+ S G + +A L +KG+ + I GL
Sbjct: 443 SLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGL 502
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
C+ GL+ A LL +M + P + + + + D
Sbjct: 503 CKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYD 542
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 2/245 (0%)
Query: 181 EQRDLSSDEL-LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
RDL S+E L F +M + D+T + +VK + + ++ + S GIKP
Sbjct: 45 SMRDLKSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKP 104
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D+ T+++N + V + + +G+ P V T+ INGLC + NV +
Sbjct: 105 DVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFA 164
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ-TYSIMIDGLAS 358
+E++G + + TY ++ LCK + + ++++K + L++ YS ++D L
Sbjct: 165 DSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCK 224
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + EA L +KG+ ++ I GLC G ++A LL M K + P +
Sbjct: 225 DGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQT 284
Query: 419 WEALL 423
+ L+
Sbjct: 285 FNVLV 289
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 117/236 (49%), Gaps = 2/236 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
++++G A+++ MI+ GF + T S ++ C+ +++ ++ L + EM G +
Sbjct: 330 LSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNI--NKALFLLGEMVNSGLNPDV 387
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V ++ +I K K A + M P++ ++L+G+ + + +A LF E
Sbjct: 388 VTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFRE 447
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + L +V YN+ ++G+C + ++ +C+ G K DV+ Y T+++ LCK
Sbjct: 448 MEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGL 507
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
L+ L+ +M+ G + N TY++ + GL + DI + L KGL ++
Sbjct: 508 LDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADAT 563
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKK---LGFCFGMVD 208
A+ +L M+N G D T S ++ C+ + ++ EL + E + L C ++D
Sbjct: 371 ALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILD 430
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
L K + +A+ + +M+ ++ ++V Y +VL+G+ A+ELF L
Sbjct: 431 ------GLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLP 484
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ DV Y I GLCK+ ++ ++ MEE G P+ TYN ++ L + +++
Sbjct: 485 SKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDIS 544
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMI 353
R + + MK KG+ + T ++I
Sbjct: 545 RSTKYLLLMKGKGLSADATTTELLI 569
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+TC++IL + + + S E + +EM+K+ +V Y V+ + K+ DA +
Sbjct: 423 QTCAIILDGLFKCQFHS--EAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELF 480
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+ + S GIK D+V YT ++ G+ + AE L ++ G +P+ +TYNV++ GL ++
Sbjct: 481 SCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQR 540
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
++ K + M+ G D T L+ +E + L ++E
Sbjct: 541 YDISRSTKYLLLMKGKGLSADATTTELLISYFSANKENSALHVFLQE 587
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 248 LNGVIVQ-EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
L G+IV+ + Y L + LG+ PDVYT + IN LC N+ G ++ M ++G
Sbjct: 77 LFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIG 136
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P V+T+ TL I+GL ++G++ A
Sbjct: 137 VDPTVVTFATL-----------------------------------INGLCAEGNVARAA 161
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
+ + G + S + I GLC+ G A+ L+++ ++ + + ++ S
Sbjct: 162 RFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDS 221
Query: 427 VSK 429
+ K
Sbjct: 222 LCK 224
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 132/262 (50%), Gaps = 2/262 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +C++ + DE L + EM + G +V + +I S K+ + DA+G+L
Sbjct: 327 TYTVLIDYLCKEGRM--DEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLG 384
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M+S + P++ Y ++ G + +A L ++++ L PDV TYN I+GLC+
Sbjct: 385 LMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVG 444
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
V++ ++ M G PD T+N + LC++ + ++++ +K K + N Y+
Sbjct: 445 VVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+IDG G I A L + L + S F+ I GL + G V+ A+ L++ MA
Sbjct: 505 ALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564
Query: 411 DVSPGARVWEALLLSSVSKLDF 432
DV P + L+ + + DF
Sbjct: 565 DVKPTLHTYNILVEEVLKEYDF 586
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YTN+I L + K+ +AL +M+ DG P + YT+++ + ++A LF E
Sbjct: 256 VSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGE 315
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G P+VYTY V I+ LCK+ ++ +KM+ M E G P V+ +N L+ + CK
Sbjct: 316 MRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGM 375
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ ++ M+ K + N++TY+ +I G + A LL + + L ++
Sbjct: 376 MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNT 435
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
I GLC+ G+V A L + M SP + A ++
Sbjct: 436 LIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMV 473
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 140/286 (48%), Gaps = 10/286 (3%)
Query: 165 FCV----DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV-DYTNVIRSLVKK 219
FCV + + + ++ +CE L E L F M++ G CF V YT ++ +L +
Sbjct: 247 FCVMPRRNAVSYTNLIHGLCEAGKL--HEALEFWARMREDG-CFPTVRTYTVLVCALCES 303
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +AL + +M+ G +P++ YT++++ + + +A ++ +E++ G+ P V +
Sbjct: 304 GRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPF 363
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N I CK+ +E + ++ ME P+V TYN L+ C+ + ++R L+ +M
Sbjct: 364 NALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVE 423
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ ++ TY+ +I GL G + A L + G F+ + LC+ G V +
Sbjct: 424 SKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGE 483
Query: 400 ALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
A ++L+ + +K V + AL+ K++ + F R++ +
Sbjct: 484 AHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAE 529
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ YT+++ + + V A G+ M + + V YT +++G+ +A E +
Sbjct: 224 LFTYTSLVLGYCRNDDVERACGVFCVMP----RRNAVSYTNLIHGLCEAGKLHEALEFWA 279
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G P V TY V + LC+ + + M E G +P+V TY L+ LCK
Sbjct: 280 RMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEG 339
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +++ EM KG+ ++ ++ +I +G + +A G+L +K +C ++
Sbjct: 340 RMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYN 399
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E ICG C+ + +A+ LL +M + +SP + L+
Sbjct: 400 ELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLI 437
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 36/260 (13%)
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQE 255
+L F + Y ++ L + V + + + +M +D + P+++ +LN
Sbjct: 144 QLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLG 203
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV----------------------- 292
+ A F +L PD++TY + G C+ ++V
Sbjct: 204 NMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIH 263
Query: 293 ---EAG-----IKMIACMEELGSKPDVITYNTLLQALCKV-RELNRLRELVKEMKWKGIV 343
EAG ++ A M E G P V TY L+ ALC+ REL L L EM+ +G
Sbjct: 264 GLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEAL-SLFGEMRERGCE 322
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ TY+++ID L +G + EA +L E + KG+ F+ I C+RG++ A+ +
Sbjct: 323 PNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGV 382
Query: 404 LKQMADKDVSPGARVWEALL 423
L M K V P R + L+
Sbjct: 383 LGLMESKKVCPNVRTYNELI 402
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 157/366 (42%), Gaps = 22/366 (6%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
CEP Y +I L + + + +L+ E E P + F LI +Y +D
Sbjct: 321 CEPNVYTYTVLIDYLCKEGRMDEALKMLN--EMVEKGVAPSVVPFNALIGSYCKRGMMED 378
Query: 135 SVNLFYKI------PKFRINR---VGF--------AIEILNCMINDGFCVDGKTCSLILS 177
+V + + P R GF A+ +LN M+ D T + ++
Sbjct: 379 AVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIH 438
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+CE + S L + M + GF + + L + +V +A IL +K +
Sbjct: 439 GLCEVGVVDSASRL--FRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHV 496
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
K + YT +++G A LF +L +P+ T+NV I+GL K+ V+ +
Sbjct: 497 KANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAML 556
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M + KP + TYN L++ + K + +R E++ + G N+ TY+ I
Sbjct: 557 LVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYC 616
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
S+G + EA ++ + N+G+ S +++ I GL+ A +L++M P
Sbjct: 617 SQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYL 676
Query: 418 VWEALL 423
+ L+
Sbjct: 677 TYSILM 682
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ + +I L K+ KV DA+ ++ M +KP + Y +++ V+ + D+ +A E+ +
Sbjct: 536 ITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNR 595
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L+ G P+V TY +I C Q +E +M+ ++ G D YN L+ A +
Sbjct: 596 LISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGL 655
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLA----------------------------- 357
L+ +++ M G + TYSI++ L
Sbjct: 656 LDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIW 715
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
SK D L E+ G + + + I GLC+ G + A L M + +SP
Sbjct: 716 SKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEI 775
Query: 418 VWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ + LLSS KL + + L+D ++
Sbjct: 776 IHNS-LLSSCCKLGMFGEA-VTLLDSMM 801
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 31/284 (10%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A EILN +I+ G+ + T + + + C Q L E + V ++K G Y +
Sbjct: 589 ANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEM--VIKIKNEGVLLDSFIYNLL 646
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE----------------- 255
I + + A G+L +M G +P + Y++++ +++++
Sbjct: 647 INAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTN 706
Query: 256 ------------DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
D+ LF+++ G VP++ TY+ INGLCK + + M
Sbjct: 707 ISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMR 766
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G P I +N+LL + CK+ L+ M + +L++Y ++I GL + +
Sbjct: 767 EGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKE 826
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+A + L G + I GL + G V + ELL M
Sbjct: 827 KAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLM 870
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
M++ G + + +++ S K +A+ +L+ M + Y +++ G+ Q
Sbjct: 763 HHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQ 822
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ KAE +F LL G D + V I+GL K V+ +++ ME+ G + TY
Sbjct: 823 MNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETY 882
Query: 315 NTLLQALCKVRELNR 329
+ L+Q ELNR
Sbjct: 883 SMLMQ------ELNR 891
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 35/249 (14%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M+ G +V Y +I ++ ++ V A +LN + S G KP+ V Y VL G+ E
Sbjct: 7 MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIER 66
Query: 257 YVKAEELFDELLV-----------------------------------LGLVPDVYTYNV 281
+V AEEL DE++ G +V TYN
Sbjct: 67 WVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNA 126
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+G+C+Q +V++ +++++ M+ G KPD++TYNTLL+ LC + EL+ +M
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ + T++ +I L KG I++A + ++ KG S+ + I GL + G + +AL
Sbjct: 187 CLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQAL 246
Query: 402 ELLKQMADK 410
ELL +MA K
Sbjct: 247 ELLNEMASK 255
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 145/339 (42%), Gaps = 21/339 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL+S C+P Y+ V+K L ++ D +LD + REN E ++ T
Sbjct: 38 LLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELLDEM-VRENCPPNEATVNVIVNTL 96
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
+ Q K+ K V A+E+L+ M + G D
Sbjct: 97 SRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDI 156
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T + +L +C E L +M + V + +I L +K + A +
Sbjct: 157 VTYNTLLKGLCSADQWEDAEELMI--KMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVF 214
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
QM G P+ Y+ ++ G+ +A EL +E+ G D Y + L K+
Sbjct: 215 KQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTD-KMYQLLTESLNKE 273
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ +E ++++ +++ G P + +NT+L LC+ + + +++ +M G + + TY
Sbjct: 274 DKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTY 333
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
I+I+GL+ +G + EA L+ ++ + + S + +E +
Sbjct: 334 IILIEGLSYEGYLQEARELVSRLCSRDVLSNSLIKNEAL 372
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 177/384 (46%), Gaps = 62/384 (16%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
YH +++ L+E + +++ I +E + E + + +IKTY ++++F ++
Sbjct: 46 YHHILRRLSEARMVTHVGRIVELIRSQE-CKCDEDVALSVIKTYGKNSMPDRALDVFKRM 104
Query: 143 PKFRINRVGFAIEILNCMIND--------------------GFCVDGKTCSLILSSVCEQ 182
+ G I N ++N G + +T ++++ C++
Sbjct: 105 REIFGCEPG--IRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKK 162
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
++ ++ GF+ M K GF + Y+ VI L K K+ DAL + ++M + PD+
Sbjct: 163 KEF--EKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVT 220
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELL---------------VLGLV-------------- 273
CY ++++G + ++D+ A +L+D+LL + GL
Sbjct: 221 CYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDR 280
Query: 274 -------PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
D+YTY+ I+GLC + NV+ + + E + DV+TYNT+L C+ +
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGK 340
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ EL + M+ + V N+ +Y+I+I GL G I EA + KG ++ +
Sbjct: 341 IKESLELWRIMEQRNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGI 399
Query: 387 TICGLCQRGLVRKALELLKQMADK 410
I GLC G V KAL +++++ K
Sbjct: 400 FIHGLCVNGYVNKALGVMQEVESK 423
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 131/280 (46%), Gaps = 2/280 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A+ ++ + + G +D + I+ +C++R L +E V+EM K G
Sbjct: 410 VNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRL--EEASNLVKEMSKHGVELNSHVC 467
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L++ ++ DA ++ M +G P +V Y +++ G+ + +A E+L
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
GL PD+ TY++ + GLC+ +E +++ + G +PDV+ +N L+ LC V +L+
Sbjct: 528 NGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDD 587
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
++ M+ + NL TY+ +++G D A + GL ++ +
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILK 647
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
GLC V A+E + + P W L+ + V++
Sbjct: 648 GLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 159/376 (42%), Gaps = 28/376 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S+Y P + ++ +I L++ + D + D +++ E E + + LI
Sbjct: 245 LLEDSSVY---PNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNER-EKDLYTYSSLIHGL 300
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFA-IEILNCMINDGFCVDGKTC-SLILSSVCEQRD 184
D + ++F ++ + R F + N M+ GFC GK SL L + EQR+
Sbjct: 301 CDEGNVDKAESVFNEL----VERKAFIDVVTYNTMLG-GFCRCGKIKESLELWRIMEQRN 355
Query: 185 LSS-----------------DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+ DE + M G+ Y I L V ALG
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALG 415
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++ +++S G D+ Y +++ + + +A L E+ G+ + + N I GL
Sbjct: 416 VMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ + + ++ M + G P V++YN L+ LC+ + VKEM G+ +L+
Sbjct: 476 RDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLK 535
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TYSI++ GL I A L + L GL M + I GLC G + A+ ++ M
Sbjct: 536 TYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 408 ADKDVSPGARVWEALL 423
++ + + L+
Sbjct: 596 EHRNCTANLVTYNTLM 611
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 4/237 (1%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+VI++ K AL + +M+ G +P I Y +LN + + +VK E LF
Sbjct: 83 SVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ P++ TYNV I CK+ E + M + G KPDV +Y+T++ L K +L+
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDD 202
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL-NKGLCTQSSMFDETI 388
EL EM + + ++ Y+I+IDG + D A L ++ L + + + I
Sbjct: 203 ALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMI 262
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
GL + G V L++ +M + + +L+ L +D + F LV++
Sbjct: 263 SGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVER 319
>gi|242069685|ref|XP_002450119.1| hypothetical protein SORBIDRAFT_05g000810 [Sorghum bicolor]
gi|241935962|gb|EES09107.1| hypothetical protein SORBIDRAFT_05g000810 [Sorghum bicolor]
Length = 361
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 117/235 (49%), Gaps = 4/235 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + A ++L CM D + C +L+S+C + ++ + L F+ +M++ G G
Sbjct: 91 RAGQPSAAADVLRCMPPLLLDPDPRHCRAVLASLCRR---AARDALAFLDDMRRWGVPPG 147
Query: 206 MVDYTNVIRSLVKKEKVFDALGIL-NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
D+ V+ +L+++ +A ++ +M DG+ P + + +L + EE F
Sbjct: 148 RPDHRAVVGALLREGMHAEAYEVVAKRMDGDGVAPGLPEFERLLRAFRDRGRLDAVEEAF 207
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+L+ G+VP Y VY+ LC +V A +M+ CME G PD T+ ++
Sbjct: 208 DEMLLRGIVPCARVYGVYLGALCDGGDVAAARRMLGCMERAGCPPDAPTFGVVVAGCVAA 267
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
+++ RE+V+E +G+ + + S+++ L + G + A LL + L G C
Sbjct: 268 GDVDAAREVVEEAVGRGLRWDAPSLSVLVAALRAGGHLAPARPLLLDILRDGCCA 322
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R A ++L + GF T + I+ ++ +SS L +EM + G
Sbjct: 570 KVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSS--ALTAYREMCESGVSPN 627
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT +I K AL + N+M++ G++ DI Y +++G ++D A LF
Sbjct: 628 VITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFS 687
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
ELL GL P+ YN I+G NN+EA + + M G D+ TY TL+ L K
Sbjct: 688 ELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEG 747
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L +L EM KGI+ ++ Y+++I+GL KG + A +L E + +++
Sbjct: 748 RLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYN 807
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G +++A L +M DK ++P ++ L+
Sbjct: 808 ALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 139/281 (49%), Gaps = 6/281 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGF 202
F+ +A + + M+++ T ++ ++ +C+ + + D L FV++ GF
Sbjct: 534 FKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK----GF 589
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y +++ +K+ V AL +M G+ P+++ YT ++NG + A +
Sbjct: 590 VPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALK 649
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ +E+ GL D+ Y I+G CK+ ++E + + + + G P+ + YN+L+
Sbjct: 650 MRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYR 709
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ + L K M +GI +LQTY+ +IDGL +G ++ A L E KG+
Sbjct: 710 NLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDII 769
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GLC +G + A ++L +M ++P ++ AL+
Sbjct: 770 IYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALI 810
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 37/288 (12%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + +LS +C++ +S E Q+M G V Y ++I ++ + A + +
Sbjct: 455 TYNSLLSWLCKEGKMS--EATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFS 512
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC--- 287
M G+KP+++ Y+++++G D A +FD ++ +VP +TYN+ INGLC
Sbjct: 513 DMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVG 572
Query: 288 --------------------------------KQNNVEAGIKMIACMEELGSKPDVITYN 315
K+ +V + + M E G P+VITY
Sbjct: 573 RTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYT 632
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ CK + ++ EM+ KG+ L++ Y +IDG K DI A L E L+
Sbjct: 633 TLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDG 692
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL S +++ I G + AL L K+M + +S + + L+
Sbjct: 693 GLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLI 740
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 165/365 (45%), Gaps = 29/365 (7%)
Query: 102 VLDHI---EKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRI----------- 147
++DH KR +F++ I+ L+ +Y A++ D++ F ++ + I
Sbjct: 157 LVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLL 216
Query: 148 ------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ + A E+ M+ G D T +++ + +D + +E F E K G
Sbjct: 217 TALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRA--NLKDNNEEEAKKFFLEAKSRG 274
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
Y+ VI++ K V A G+L M+ G P +T V+ + Q + V+A
Sbjct: 275 VKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEAL 334
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
L DE++ G+ +V + G CKQ+ + + ++ M E G P+ +TY L++
Sbjct: 335 RLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWC 394
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK + + +L +MK K I + + +I G EA L +EA+ C +
Sbjct: 395 CKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAV---ACDIA 451
Query: 382 SMF--DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK--LDFVNTSF 437
++F + + LC+ G + +A L ++M DK ++P + +++L + LD + F
Sbjct: 452 NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVF 511
Query: 438 IRLVD 442
++D
Sbjct: 512 SDMLD 516
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +++ L K+ K+ +A + +M G+ P V Y ++ G Q + A +F ++L
Sbjct: 456 YNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDML 515
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P+V TY++ ++G K + E + M + P TYN + LCKV +
Sbjct: 516 DCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTS 575
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++++K+ KG V TY+ ++DG +G + A E G+ + I
Sbjct: 576 EAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLI 635
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
G C+ AL++ +M +K + + AL+ K D S++
Sbjct: 636 NGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWL 685
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 23/314 (7%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFA-IEILNCMINDGFC 166
K E E IF+ + + Y H+ D+V +F K+ ++ + I + ++ +
Sbjct: 77 KEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGEN-- 134
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA- 225
Q L+ L F + M+++G + +I++L K DA
Sbjct: 135 ---------------QLKLA----LRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAA 175
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
L I +M + G PD Y ++NG+ +A+ELF E+ P V TY I+G
Sbjct: 176 LRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHG 235
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LC+ ++++ I+++ M G KP+V TY++L+ CK +R EL+ M + + N
Sbjct: 236 LCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPN 295
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ TYS ++ GL +G + EA +L+ +GL + ++ + I G C +A L
Sbjct: 296 MITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLD 355
Query: 406 QMADKDVSPGARVW 419
+M +SP W
Sbjct: 356 EMVLGGISPNRLTW 369
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-ELFDEL 267
Y V LV + ++ AL M+ GI P + +++ + + A +F E+
Sbjct: 123 YITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREM 182
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G PD YTY INGLC+ + ++ ME P V+TY +L+ LC+ ++L
Sbjct: 183 PNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDL 242
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L++EM KGI N+ TYS ++DG G A LL+ +++ +
Sbjct: 243 DSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTL 302
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ G +++A+E+L +M + + P A ++ ++
Sbjct: 303 VHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKII 338
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 132/294 (44%), Gaps = 43/294 (14%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ I M N G D T +++ +C + + L +EM+ +V YT++
Sbjct: 175 ALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKEL--FKEMETKACSPTVVTYTSL 232
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L + + + A+ +L +M S GIKP++ Y+ +++G +A EL D ++
Sbjct: 233 IHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRH 292
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL----- 327
+P++ TY+ ++GLCK+ ++ ++++ M+ G +PD Y ++ C + +
Sbjct: 293 LPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAAN 352
Query: 328 ------------------------------------NRLRELVKEMKWKGIVLNLQTYSI 351
NR +L M+ +GI ++ +T+
Sbjct: 353 FLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDS 412
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+++ +KGD+ +A L++E + G ++ +C R VR++ EL++
Sbjct: 413 LVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQ 466
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 153/331 (46%), Gaps = 31/331 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDG 164
L+K HR + LF K+ K + + A+E+ M++D
Sbjct: 569 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 628
Query: 165 --FCVDGK----TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
+ ++ K + S+I+ +C+ DE +EMK LG ++ YT++I +
Sbjct: 629 SPYGINCKPNAISYSIIIDGLCKCG--REDEARELFKEMKALGVIPDVISYTSLIHGFCR 686
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
K DA + N+M G++PD+ ++++++ + + ++A EL + ++ G +P+ T
Sbjct: 687 SGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVT 746
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM- 337
Y + GLC + + ++ M++LG PDV+TY TL++ LC+ + EL K+M
Sbjct: 747 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806
Query: 338 -----KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ +YSI+IDGL G EA L +E G+ + I G C
Sbjct: 807 SDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFC 866
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + A L +M D+ V A + ++
Sbjct: 867 RSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 897
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 169/363 (46%), Gaps = 42/363 (11%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFE-------TPEFI-FIDLIKTYA 127
C+P +Y +I L ++ + E RE FE P+ I + LI +
Sbjct: 454 CKPTLISYSIIIDGLCKDRR---------EDEARELFEEMKAQGIMPDVISYTTLIHGFC 504
Query: 128 DAHRFQDSVNLFYKI------PKFRINRV--------GFAIE---ILNCMINDGFCVDGK 170
+ +++ + LF ++ P + V G IE +L +I G +D
Sbjct: 505 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVV 564
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
TC+ ++ +C + +S L +M+KLG +V +++ L + + AL +
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFL--KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 622
Query: 231 QMKSD----GI--KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
M SD GI KP+ + Y+++++G+ +A ELF E+ LG++PDV +Y I+
Sbjct: 623 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 682
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G C+ + + M ++G +PDV T++ L+ LCK ++ EL++ M +G +
Sbjct: 683 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 742
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N TY+ ++ GL I EA L + G + + GLCQ G ++ ALEL
Sbjct: 743 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELH 802
Query: 405 KQM 407
K+M
Sbjct: 803 KKM 805
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 8/287 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L MI G +D T S ++ +C + +S E M+KLG + Y +
Sbjct: 73 ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRIS--EATWLFMSMQKLGCRPDAITYGTL 130
Query: 213 IRSLVKKEKVFDALGILNQMKSD----GIK--PDIVCYTMVLNGVIVQEDYVKAEELFDE 266
++ L + + AL + +M +D GIK P ++ Y+++++G+ +A ELF E
Sbjct: 131 MKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKE 190
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G++PDV +Y I+G C E + M ++G +PDV T L+ CK +
Sbjct: 191 MKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGK 250
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ EL++ M +G +L++ TYS +I GL K I EA L G + +
Sbjct: 251 VIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGT 310
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
+ GLCQ G + AL L ++M + G + + +S +D +
Sbjct: 311 LMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDIL 357
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 45/306 (14%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFE-------TPEFI-FIDLIKTY 126
NC+P +Y +I L + + E RE F+ P+ I + LI +
Sbjct: 634 NCKPNAISYSIIIDGLCKCGR---------EDEARELFKEMKALGVIPDVISYTSLIHGF 684
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDL 185
+ +++D+ LF N M++ G D T S+++ +C E + +
Sbjct: 685 CRSGKWKDAKYLF------------------NEMVDIGVQPDVTTFSVLIDMLCKEGKVI 726
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
++ELL + M + G V YT +++ L +++ +A + +M+ G PD+V Y
Sbjct: 727 EANELL---EVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYG 783
Query: 246 MVLNGVIVQEDYVKAEELFDELLV------LGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++ G+ + A EL ++L PDV +Y++ I+GLCK + ++
Sbjct: 784 TLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELF 843
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M+ LG P+VI+Y +L+ C+ +L + L EM +G+ LN TYS+MI G +
Sbjct: 844 KEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKE 903
Query: 360 GDIIEA 365
G I +A
Sbjct: 904 GQIDKA 909
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 150/336 (44%), Gaps = 34/336 (10%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMI 161
+ LIK HR ++ LF + K + ++ A+ + M+
Sbjct: 273 YSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML 332
Query: 162 NDGF-----CV--DGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
ND C+ D T S+++ +C E + + ++ELL + M + G +V Y+ +I
Sbjct: 333 NDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELL---EVMIQRGCILDIVTYSTLI 389
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL----- 268
+ L + ++ +A + M+ G +PD + Y ++ G+ + A +L E+L
Sbjct: 390 KGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGR 449
Query: 269 -VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ P + +Y++ I+GLCK + ++ M+ G PDVI+Y TL+ C +
Sbjct: 450 YGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKW 509
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + L EM GI ++ T S++ID L KG +IEA LLE + +G
Sbjct: 510 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTL 569
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC + + KA +L +M P L+
Sbjct: 570 VKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLM 605
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 172/419 (41%), Gaps = 68/419 (16%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y+ P +I L + + + + +L+ + +R + LIK HR
Sbjct: 48 YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI-LDIVTYSTLIKGLCMEHRIS 106
Query: 134 DSVNLFYKIPKF-----------------RINRVGFAIEILNCMINDG--FCVDGK---- 170
++ LF + K + + A+++ M+ND + + K
Sbjct: 107 EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLI 166
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+ S+I+ +C+ R DE +EMK G ++ YT++I K A + N
Sbjct: 167 SYSIIIDGLCKDR--REDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFN 224
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M GI+PD+ ++++ + ++A EL + ++ G + D+ TY+ I GLC ++
Sbjct: 225 EMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKH 284
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN---------------------- 328
+ ++ M++LG +PD I Y TL++ LC+ ++N
Sbjct: 285 RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIR 344
Query: 329 --------------------RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
EL++ M +G +L++ TYS +I GL + I EA L
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWL 404
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
G + + + GLCQ G + AL+L ++M + G + L+ S+
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 123/224 (54%), Gaps = 6/224 (2%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y+ +I L K + +A + +MK+ GI PD++ YT +++G + + KA+ LF+
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L +G+ PDV T +V I+ LCK+ V K++ + + G DV+T TL++ LC
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKH 577
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK----GL-CTQ 380
+++ +L +M+ G + N+ T + ++ GL G+I A L + L+ G+ C
Sbjct: 578 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 637
Query: 381 SSM-FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+++ + I GLC+ G +A EL K+M V P + +L+
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 681
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 31/334 (9%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMI 161
+ LIK HR ++ LF + K + + A+++ M+
Sbjct: 385 YSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 444
Query: 162 NDG--FCVDGK----TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
ND + + K + S+I+ +C+ R DE +EMK G ++ YT +I
Sbjct: 445 NDTGRYGIKCKPTLISYSIIIDGLCKDR--REDEARELFEEMKAQGIMPDVISYTTLIHG 502
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K A + N+M GI+PD+ +++++ + + ++A +L + ++ G + D
Sbjct: 503 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILD 562
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V T + GLC ++ + ++ M++LG P+V+T TL++ LC+ + EL K
Sbjct: 563 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 622
Query: 336 EM----KWKGIVL--NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
M GI N +YSI+IDGL G EA L +E G+ + I
Sbjct: 623 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 682
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ G + A L +M D V P + L+
Sbjct: 683 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLI 716
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 163/398 (40%), Gaps = 73/398 (18%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
C+P +Y +I L ++ + + + E + P+ I + LI + + +++
Sbjct: 161 CKPTLISYSIIIDGLCKDRREDEARELFK--EMKAQGMMPDVISYTSLIHGFCHSGKWEK 218
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGF 193
+ LF N M++ G D T +++ C E + + ++ELL
Sbjct: 219 AKCLF------------------NEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELL-- 258
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG--- 250
+ M G +V Y+ +I+ L K ++ +A + MK G +PD + Y ++ G
Sbjct: 259 -EVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQ 317
Query: 251 --------------------------------------VIVQEDYV-KAEELFDELLVLG 271
++ +E V +A EL + ++ G
Sbjct: 318 TGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 377
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ D+ TY+ I GLC ++ + + M++LG +PD ITY TL++ LC+ +N
Sbjct: 378 CILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIAL 437
Query: 332 ELVKEM----KWKGIVL--NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L +EM GI L +YSI+IDGL EA L EE +G+ +
Sbjct: 438 QLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYT 497
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C G KA L +M D + P L+
Sbjct: 498 TLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLI 535
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT---------LLQAL 321
GL PD +T+N+ IN LC V G+ +A + G PD++TY+ L+ L
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK ++ EL++ M +G +L++ TYS +I GL + I EA L G +
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ + GLCQ G + AL+L ++M + G + L+ S+
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 170
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 9/131 (6%)
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI---------M 352
M G PD T+N L+ LC V+ +N + + +G + ++ TYSI +
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
ID L +G +IEA LLE + +G + I GLC + +A L M
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 413 SPGARVWEALL 423
P A + L+
Sbjct: 121 RPDAITYGTLM 131
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 156/348 (44%), Gaps = 29/348 (8%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P A Y+ VI + V+ + +R ++ + LI + R +D+
Sbjct: 143 PRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDA 202
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+F ++ V + + N +I G+C GK D L + +
Sbjct: 203 AKVFDEM--LTQGEVAPSAVMYNALIG-GYCDRGKL----------------DVALQYRE 243
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M + G + Y ++ +L + DA +L +M+ +G+ PD+ Y +++NG +
Sbjct: 244 DMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEG 303
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ KA E+F+E+ G+ TY I ++ V+ ++ + G +PDV+ YN
Sbjct: 304 NEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYN 363
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ + C ++ R E++ EM+ K I + TY+ +I G G + EA GL++E +
Sbjct: 364 ALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKR 423
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + GLC+ G A L+K+M K ++P + +L+
Sbjct: 424 GI--------QPDLGLCKNGQGDDAENLMKEMVGKGITPDDSTYISLI 463
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 2/228 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKS-DGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y VI + +V AL ++ +M+ GI PD Y +++G A ++FD
Sbjct: 148 VTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFD 207
Query: 266 ELLVLG-LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+L G + P YN I G C + ++ ++ M + G V TYN L+ AL
Sbjct: 208 EMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMD 267
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ +++EM+ G+ ++ TY+I+I+G +G+ +A + EE KG+ + +
Sbjct: 268 GRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTY 327
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
I ++G V++ L K K + P ++ AL+ S + D
Sbjct: 328 TSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDM 375
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+N +L+ LC + R EL+++M N TY+ +I G ++G + A ++ E
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPRP----NAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 373 LNK-GLCTQSSMFDETICGLCQRGLVRKALELLKQM-ADKDVSPGARVWEALL 423
+ G+ + I G C+ G + A ++ +M +V+P A ++ AL+
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALI 226
>gi|449434442|ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Cucumis sativus]
Length = 464
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 24/314 (7%)
Query: 121 DLIKTYADAHRFQDSVNLFYKI----PKFRINRVGFAI-----------------EILNC 159
L+++YA DS++ + P F ++ F I +ILN
Sbjct: 91 SLLQSYASIATLNDSISFLRHMSKVQPSFSPDQSTFHILLSTSGNRPDSTLASVQQILNF 150
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ +GF D T L + S+C + DE + V+E+ + + Y ++++ L K
Sbjct: 151 MVTNGFNPDKVTADLAVRSLCSVGLV--DEAVELVKELSQKHTPPDIYTYNHLVKQLCKS 208
Query: 220 EKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ + +M+S G KPD+V YT++++ V + +A L L G PD +
Sbjct: 209 RALSTVYNFIVEMRSSCGAKPDLVTYTILIDNVCNSNNLREAMRLVSLLYKEGFKPDCFV 268
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN + G C I + M+E+G +PDV+T+NTL+ L K + R + M
Sbjct: 269 YNTIMKGYCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMA 328
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G + TY+ +++G+ +G+ + A LL+E KG S ++ + GL + L+
Sbjct: 329 EMGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLD 388
Query: 399 KALELLKQMADKDV 412
+ +EL M D+
Sbjct: 389 RGIELYGLMKSCDM 402
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +VC +L E + V + K GF Y +++ + +A+G+
Sbjct: 233 TYTILIDNVCNSNNLR--EAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYK 290
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK G++PD+V + ++ G+ +A D + +G PD TY +NG+C++
Sbjct: 291 KMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREG 350
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N + ++ ME G P+ TYNTLL L K R L+R EL MK + L +YS
Sbjct: 351 NALGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYS 410
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ L G I EA + + A+ T S +
Sbjct: 411 TFVRALCRSGRIAEAYEVFDYAVESKSLTDVSAY 444
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFC 166
+E F+ F++ ++K Y R +++ ++ K+ VG +++ N +I G
Sbjct: 259 KEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKM-----KEVGLEPDVVTFNTLIF-GLS 312
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
G+ V E R+ F+ M ++G V YT+++ + ++ AL
Sbjct: 313 KSGR--------VKEARN--------FLDIMAEMGHFPDAVTYTSLMNGMCREGNALGAL 356
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+L +M++ G P+ Y +L+G+ + EL+ + + + +Y+ ++ L
Sbjct: 357 SLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYSTFVRAL 416
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTL---LQALCKVRE 326
C+ + ++ E S DV Y +L L++L RE
Sbjct: 417 CRSGRIAEAYEVFDYAVESKSLTDVSAYLSLESTLKSLKNARE 459
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 149/354 (42%), Gaps = 54/354 (15%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE-ILNCMINDG---------------- 164
LI+ Y QDS+ +F + + N + IL ++ G
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
C D T +++++ +C + L +Q+M+K G+ +V Y V+ KK +
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYL--MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLN----------GVIVQEDYVK--------------- 259
A+ +L+ MKS G+ D+ Y M+++ G ++ D K
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 306
Query: 260 ----------AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
A +L +E+L GL P+ T+N I+G + N + +KM ME G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
++Y LL LCK E + R MK G+ + TY+ MIDGL G + EA LL
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E G+ + I G C+ G + A E++ ++ +SP ++ L+
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++L +C+ + D GF MK+ G C G + YT +I L K + +A+ +LN+M
Sbjct: 372 GVLLDGLCKNAEF--DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
DGI PDIV Y+ ++NG + A+E+ + +GL P+ Y+ I C+ +
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ I++ M G D T+N L+ +LCK ++ E ++ M GI+ N ++ +
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G + G+ ++A + +E G + + GLC+ G +R+A + LK +
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 413 SPGARVWEALL 423
+ ++ LL
Sbjct: 610 AVDTVMYNTLL 620
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 44/347 (12%)
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+N F K+ +F+ A EI+ + G +G S ++ + C L E + +
Sbjct: 445 INGFCKVGRFKT-----AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK--EAIRIYE 497
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
M G + ++ SL K KV +A + M SDGI P+ V + ++NG
Sbjct: 498 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 557
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ +KA +FDE+ +G P +TY + GLCK ++ K + + + + D + YN
Sbjct: 558 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 617
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TLL A+CK L + L EM + I+ + TY+ +I GL KG + A +EA +
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 677
Query: 376 G---------LCTQSSMF---------------------------DETICGLCQRGLVRK 399
G C MF + I G + G + K
Sbjct: 678 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 737
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+LL +M +++ P + +LL SK V+TSF+ ILN
Sbjct: 738 TNDLLPEMGNQNGGPNLTTYN-ILLHGYSKRKDVSTSFLLYRSIILN 783
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 116/231 (50%), Gaps = 2/231 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ S+VK + L +M I PD+ + +++N + + + K+ L ++ G
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 223
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P + TYN ++ CK+ +A I+++ M+ G DV TYN L+ LC+ + +
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L+++M+ + I N TY+ +I+G +++G ++ A LL E L+ GL F+ I G
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
G ++AL++ M K ++P + LL L ++ D ++R+
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 38/343 (11%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
F+F L+ TY + ++ ++ R + ++EI M GF TC+ I
Sbjct: 106 SFVFGALMTTYRLCNSNPSVYDILIRV-YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 164
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L SV + + S + F++EM K C + + +I L + + ++ +M+
Sbjct: 165 LGSVVKSGEDVS--VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 222
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G P IV Y VL+ + + A EL D + G+ DV TYN+ I+ LC+ N + G
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 282
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ M + P+ +TYNTL+ ++ +L+ EM G+ N T++ +IDG
Sbjct: 283 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 342
Query: 356 LASKGDIIEAC------------------GLLEEALNK-----------------GLCTQ 380
S+G+ EA G+L + L K G+C
Sbjct: 343 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 402
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ G + +A+ LL +M+ + P + AL+
Sbjct: 403 RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +IR +++ + D+L I M G P + +L V+ + V E+L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ PDV T+N+ IN LC + + E ++ ME+ G P ++TYNT+L CK
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL+ MK KG+ ++ TY+++I L I + LL + + + ++ I
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
G G V A +LL +M +SP + AL+ +S+ +F
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 37/311 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R AIE+L+ M + G D T ++++ +C ++ LL +++M+K V
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL--LRDMRKRMIHPNEV 299
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + KV A +LN+M S G+ P+ V + +++G I + ++ +A ++F +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 268 LVLGLVPDVYTYNVYINGLCK---------------QNNVEAG----------------- 295
GL P +Y V ++GLCK +N V G
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 296 ---IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M + G PD++TY+ L+ CKV +E+V + G+ N YS +
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G + EA + E + +G F+ + LC+ G V +A E ++ M +
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 413 SPGARVWEALL 423
P ++ L+
Sbjct: 540 LPNTVSFDCLI 550
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%), Gaps = 1/237 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F ++M LG +V +I + K+ +L +M + P++ Y ++L+G
Sbjct: 706 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 765
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
++D + L+ +++ G++PD T + + G+C+ N +E G+K++ G + D
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 825
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+N L+ C E+N +LVK M GI L+ T M+ L E+ +L E
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+G+ +S + I GLC+ G ++ A + ++M + P V E+ ++ +++K
Sbjct: 886 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP-PNVAESAMVRALAK 941
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 42/305 (13%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFC 203
+ +V A E + CM +DG + + +++ S + L F EM K+G
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN----SGEGLKAFSVFDEMTKVGHH 575
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
Y ++++ L K + +A L + + D V Y +L + + KA L
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNV------------------------------- 292
F E++ ++PD YTY I+GLC++
Sbjct: 636 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695
Query: 293 -----EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+AGI M+ LG PD++T N ++ ++ ++ + +L+ EM + NL
Sbjct: 696 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 755
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I++ G + + D+ + L + G+ + G+C+ ++ L++LK
Sbjct: 756 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 815
Query: 408 ADKDV 412
+ V
Sbjct: 816 ICRGV 820
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + ++IL I G VD T ++++S C ++ + V+ M LG
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI--NWAFDLVKVMTSLGISLDKD 860
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
++ L + + ++ +L++M GI P+ Y ++NG+ D A + +E+
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + P + + L K + ++ M ++ P + ++ TL+ CK +
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 980
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL M G+ L+L +Y+++I GL +KGD+ A L EE G ++ +
Sbjct: 981 IEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040
Query: 388 ICGLCQR 394
I GL R
Sbjct: 1041 IRGLLAR 1047
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 3/248 (1%)
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
VD + +L+++C+ +L+ + + EM + YT++I L +K K A+
Sbjct: 611 VDTVMYNTLLTAMCKSGNLA--KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 227 GILNQMKSDG-IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++ G + P+ V YT ++G+ + +++ LG PD+ T N I+G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+ +E ++ M P++ TYN LL K ++++ L + + GI+ +
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
T ++ G+ + +L+ + +G+ F+ I C G + A +L+K
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 406 QMADKDVS 413
M +S
Sbjct: 849 VMTSLGIS 856
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 2/219 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD-IVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++ K++ V + + + +GI PD + C+++VL G+ ++
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL-GICESNMLEIGLKIL 812
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ G+ D YT+N+ I+ C + ++ M LG D T + ++ L +
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R ++ EM +GI + Y +I+GL GDI A + EE + +C +
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ L + G +A LL+ M + P + L+
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+DE ++ M K+ + +T ++ K V +AL + M + G+K D+V Y +
Sbjct: 945 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++ G+ + D A EL++E+ G + + TY I GL + +G +I
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1057
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+GFA+ M DG + T + ++ C + S LL EM G +V Y
Sbjct: 91 MGFAL--FAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLL--FDEMPVKGVVHNVVSY 146
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L + K+ DA+ + M+ +GI+P IV + ++++G A F+++
Sbjct: 147 NILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKA 206
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
GL P V TYN I G C+ ++ ++ M+E G P +TY L+ A K E++R
Sbjct: 207 AGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDR 266
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
++ EM+ G+ +++Q+Y +++ L +G ++ A L + KG+ S ++D I
Sbjct: 267 AFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIY 326
Query: 390 GLCQRGLVRKALELLKQMADKDVSP 414
G + G KAL L+ +M + P
Sbjct: 327 GYGREGSSYKALRLIMEMRKNGLIP 351
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 2/235 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+++++ +C L + + + M++ G +V + +I K K+ +AL NQM
Sbjct: 147 NILIAGLCRHSKLK--DAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQM 204
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K+ G+ P +V Y ++ G D +A F ++ GL P TY + I K+N +
Sbjct: 205 KAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEM 264
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ M++ ME+ G + DV +Y LL ALC ++ R+L + M KG+ N Y +M
Sbjct: 265 DRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMM 324
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I G +G +A L+ E GL + + TI LC G ++A L+ M
Sbjct: 325 IYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDM 379
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 37/292 (12%)
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
+D C+ ++ C+ D++ E M +LG V YT +I +
Sbjct: 36 LDVAACTALVHVCCQSGDVA--EARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGF 93
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ +M+ DG++P++ Y ++ ++ A LFDE+ V G+V +V +YN+ I GL
Sbjct: 94 ALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGL 153
Query: 287 CKQNNVEAGIKMIACMEELGSK-----------------------------------PDV 311
C+ + ++ +++ M G + P V
Sbjct: 154 CRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSV 213
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TYN L+ C+VR++ R +MK +G+ TY+I+I A + ++ A +L E
Sbjct: 214 VTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSE 273
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + + LC G + A +L + M K V P + +++ ++
Sbjct: 274 MEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMI 325
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 115/231 (49%), Gaps = 1/231 (0%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T ++ + V +A + + M G+ P+ V YT ++NG V+ LF E+
Sbjct: 42 TALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRR 101
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ P++YTYN I C+ ++ + M G +V++YN L+ LC+ +L
Sbjct: 102 DGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKD 161
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+L + M+ +GI ++ T++++IDG G + A + GL ++E IC
Sbjct: 162 AVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELIC 221
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
G C+ + +A+ M ++ ++P +V +L+++ +K + ++ +F+ L
Sbjct: 222 GFCRVRDIARAVRAFLDMKERGLAP-TKVTYTILIAAFAKENEMDRAFMML 271
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQ-MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
V+R L +V AL +L + KS D+ T +++ D +A +FD + L
Sbjct: 8 VVRRLCVAAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMPRL 67
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ P+ TY ING + + E G + A M G +P++ TYN L+ C+ E
Sbjct: 68 GVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSA 127
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
R L EM KG+V N+ +Y+I+I GL + +A L E +G+ F+ I G
Sbjct: 128 RLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDG 187
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + AL QM + P + L+
Sbjct: 188 YGKAGKMANALHFFNQMKAAGLPPSVVTYNELI 220
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 126/276 (45%), Gaps = 21/276 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
+Y+ +I L +S+ D + + + +RE F LI Y A + ++++ F
Sbjct: 145 SYNILIAGLCRHSKLKDAVQLFEAM-RREGIRPSIVTFNLLIDGYGKAGKMANALHFF-- 201
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
N M G T + ++ C RD++ + F+ +MK+ G
Sbjct: 202 ----------------NQMKAAGLPPSVVTYNELICGFCRVRDIAR-AVRAFL-DMKERG 243
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
V YT +I + K+ ++ A +L++M+ G++ D+ Y ++L+ + ++ + A
Sbjct: 244 LAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHAR 303
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+LF + + G+ P+ Y++ I G ++ + +++I M + G P+V +Y ++ L
Sbjct: 304 KLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLL 363
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
C + L+ +M+ G+ + I++D A
Sbjct: 364 CNEGKCQEAEALIDDMEHAGLQTSETICRILLDAKA 399
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 167/358 (46%), Gaps = 32/358 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSV 136
P P Y+F + L ++ + + V+ ++ ++ P+ + F LI A R ++
Sbjct: 52 PTPSMYNFFVHALCKSGKVPEAMEVVKNM--KDGACKPDVVTFNTLIAGLCKAGRLDEAQ 109
Query: 137 NLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ ++ R GFA ++ N +IN G G++ +L
Sbjct: 110 QVLDEM-----ERSGFAANLVTYNTLIN-GLSSAGRSGEAVLV----------------- 146
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS-DGIKPDIVCYTMVLNGVIV 253
M+ + Y +I K ++ A G L +MK G PD Y++++NG+
Sbjct: 147 --MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCK 204
Query: 254 QEDYVKAEELFDELLVL-GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ KA+EL E++ V +N ++G CK +++ ++++ M E G PDV+
Sbjct: 205 SSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVV 264
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY+T++ LC+ ++++ L+++M +G ++ TY++++ GL G ++EAC L++
Sbjct: 265 TYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRM 324
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
L G + + GLC+ + A +LL + DK +EALLLS +L
Sbjct: 325 LEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRL 382
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 98/176 (55%), Gaps = 10/176 (5%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ P YN +++ LCK V ++++ M++ KPDV+T+NTL+ LCK L+
Sbjct: 49 GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
++++ EM+ G NL TY+ +I+GL+S G EA L+ + + TQ+ ++ I G
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAV-LVMQGMTTTPDTQT--YNAIIHG 165
Query: 391 LCQRGLVRKALELLKQMADK-DVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
C+ G + +A L++M + SP + ++L++ + K +S +R D++L
Sbjct: 166 FCKSGEIDRAYGFLEEMKQRAGCSPDTFTY-SILINGLCK-----SSNLRKADELL 215
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++R+ ++ A+ +L +M+ G+ P Y ++ + +A E+ +
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PDV T+N I GLCK ++ +++ ME G +++TYNTL+ L
Sbjct: 81 KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSA--- 137
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDE 386
R E V M+ + QTY+ +I G G+I A G LEE + C+ + +
Sbjct: 138 GRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 387 TICGLCQRGLVRKALELLKQM 407
I GLC+ +RKA ELL++M
Sbjct: 198 LINGLCKSSNLRKADELLQEM 218
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEEL-GSKPDVITYNTLLQALCKVRELNRLREL 333
D YTY V + C ++A + ++ ME+ G P YN + ALCK ++ E+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
VK MK ++ T++ +I GL G + EA +L+E G ++ I GL
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
G +A+ +++ M +P + + A++
Sbjct: 137 AGRSGEAVLVMQGMT---TTPDTQTYNAII 163
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 143/276 (51%), Gaps = 12/276 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
A+++ + M++ T + I++ +C+ Q + D+L F++E GF + Y
Sbjct: 518 ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE----GFIPSCMTYN 573
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+++ +K+ + AL + +M G+ P++V YT ++NG A + DE+
Sbjct: 574 SIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREK 633
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL DV Y+ I+G CK+ ++E+ + + E+G P+ I YN+++ R+LN +
Sbjct: 634 GLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF---RDLNNM 690
Query: 331 RELV---KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ K+M I +L TY+ +IDGL +G ++ A L E L+KG+ F
Sbjct: 691 EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 750
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC +G + A ++L++M K+++P ++ L+
Sbjct: 751 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLI 786
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ ++ A + L + +GF T + I+ ++ ++ D L +EM + G
Sbjct: 546 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI--DSALAVYREMCEFGVSPN 603
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT++I K ++ AL ++M+ G++ D+ Y+ +++G + D A++LF
Sbjct: 604 VVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFF 663
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
ELL +GL P+ YN I+G NN+EA + M D+ TY TL+ L K
Sbjct: 664 ELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEG 723
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L +L EM KGIV ++ T+ ++++GL +KG + A +LEE K + +++
Sbjct: 724 RLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYN 783
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G +++A L +M D+ + P ++ L+
Sbjct: 784 TLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 821
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 141/283 (49%), Gaps = 5/283 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G +D S+I+ +VC++ + S+ L ++EMK+ G+ +T+VI + V + +
Sbjct: 250 GVKLDAGAYSIIIQAVCKKPN--SNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMV 307
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+AL + +M + G ++V T ++ G Q + A LF+++ GL P+ TY+V I
Sbjct: 308 EALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 367
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
G C N+E ++ M+ G P V N+LL+ K +L E G+
Sbjct: 368 EGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA 427
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ TY+IM+ L G + EAC LL+ +N+G+ +++ I G C++G + A +
Sbjct: 428 -NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSV 486
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
M +D+ P + L+ + K D + + L DQ+L+
Sbjct: 487 FSDMLARDLKPNVVTYSILIDGNFKKGD--SEKALDLFDQMLS 527
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
E ++C + + F T ++++S +C+ + DE + M G +V Y ++I
Sbjct: 420 EAVDCGVANIF-----TYNIMMSWLCKGGKM--DEACSLLDNMVNQGMVPNVVSYNDMIL 472
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+K + A + + M + +KP++V Y+++++G + D KA +LFD++L L + P
Sbjct: 473 GHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAP 532
Query: 275 DVYTYNVYINGLC-----------------------------------KQNNVEAGIKMI 299
+T+N INGLC K+ N+++ + +
Sbjct: 533 TDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVY 592
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M E G P+V+TY +L+ CK ++ + EM+ KG+ L++ YS +IDG +
Sbjct: 593 REMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKR 652
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
D+ A L E L GL +++ I G + AL K+M + +
Sbjct: 653 RDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRI 705
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 3/264 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MIN G ++ + ++ C Q +L D L ++ + G V Y+ +I
Sbjct: 316 MINCGKPMNLVVATSLMKGYCAQGNL--DSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 373
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ A + QMK +GI P + +L G + + +A +LFDE + G V +++TY
Sbjct: 374 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTY 432
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ ++ LCK ++ ++ M G P+V++YN ++ C+ ++ + +M
Sbjct: 433 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 492
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ + N+ TYSI+IDG KGD +A L ++ L+ + F+ I GLC+ G + +
Sbjct: 493 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 552
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A + LK ++ P + +++
Sbjct: 553 ARDKLKNFLEEGFIPSCMTYNSIV 576
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 3/214 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A++ + M G +D S ++ C++RD+ S + L F E+ ++G +
Sbjct: 618 NRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFF--ELLEVGLSPNRI 675
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++I + AL +M +D I D+ YT +++G++ + V A +L+ E+
Sbjct: 676 VYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEM 735
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G+VPD+ T++V +NGLC + +E K++ M+ P V+ YNTL+ + L
Sbjct: 736 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL 795
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
L EM +G+V + TY I+I+G KGD
Sbjct: 796 KEAFTLHDEMLDRGLVPDDVTYDILING-KFKGD 828
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 110/226 (48%)
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K+ F + ++ + ++ ++ +A+ N M + P + ++L ++ +
Sbjct: 142 KRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMI 201
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+ +L++++++ G+ D +T +V + K+ VE + +E G K D Y+ +
Sbjct: 202 GELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSII 261
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+QA+CK N EL++EMK +G V + T++ +I ++G+++EA L EE +N G
Sbjct: 262 IQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGK 321
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + G C +G + AL L ++ + + P + L+
Sbjct: 322 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLI 367
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Query: 207 VDYTNVI-RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y N++ +LV++ + + + N+M GI D +++ + + +AEE F
Sbjct: 185 VPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFR 244
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E G+ D Y++ I +CK+ N G++++ M+E G P T+ +++ A
Sbjct: 245 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 304
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L +EM G +NL + ++ G ++G++ A L + GL +
Sbjct: 305 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 364
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C G + KA EL QM + P +LL
Sbjct: 365 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 402
>gi|449508786|ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Cucumis sativus]
Length = 464
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 24/314 (7%)
Query: 121 DLIKTYADAHRFQDSVNLFYKI----PKFRINRVGFAI-----------------EILNC 159
L+++YA DS++ + P F ++ F I +ILN
Sbjct: 91 SLLQSYASIATLNDSISFLRHMSKVQPSFSPDQSTFHILLSTSGNRPDSTLASVQQILNF 150
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ +GF D T L + S+C + DE + V+E+ + + Y ++++ L K
Sbjct: 151 MVTNGFNPDKVTADLAVRSLCSVGLV--DEAVELVKELSQKHTPPDIYTYNHLVKQLCKS 208
Query: 220 EKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ + +M+S G KPD+V YT++++ V + +A L L G PD +
Sbjct: 209 RALSTVYNFIVEMRSSCGAKPDLVTYTILIDNVCNSNNLREAMRLVSLLYKEGFKPDCFV 268
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN + G C I + M+E+G +PDV+T+NTL+ L K + R + M
Sbjct: 269 YNTIMKGYCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMA 328
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G + TY+ +++G+ +G+ + A LL+E KG S ++ + GL + L+
Sbjct: 329 EMGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLD 388
Query: 399 KALELLKQMADKDV 412
+ +EL M D+
Sbjct: 389 RGIELYGLMKSCDM 402
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 2/214 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +VC +L E + V + K GF Y +++ + +A+G+
Sbjct: 233 TYTILIDNVCNSNNLR--EAMRLVSLLYKEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYK 290
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK G++PD+V + ++ G+ +A D + +G PD TY +NG+C++
Sbjct: 291 KMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHFPDAVTYTSLMNGMCREG 350
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N + ++ ME G P+ TYNTLL L K R L+R EL MK + L +YS
Sbjct: 351 NALGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYS 410
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ L G I EA + A+ T S +
Sbjct: 411 TFVRALCRSGRIAEAYEAFDYAVESKSLTDVSAY 444
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFC 166
+E F+ F++ ++K Y R +++ ++ K+ VG +++ N +I G
Sbjct: 259 KEGFKPDCFVYNTIMKGYCMVGRGAEAIGVYKKM-----KEVGLEPDVVTFNTLIF-GLS 312
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
G+ V E R+ F+ M ++G V YT+++ + ++ AL
Sbjct: 313 KSGR--------VKEARN--------FLDIMAEMGHFPDAVTYTSLMNGMCREGNALGAL 356
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+L +M++ G P+ Y +L+G+ + EL+ + + + +Y+ ++ L
Sbjct: 357 SLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIELYGLMKSCDMKLETASYSTFVRAL 416
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTL---LQALCKVRE 326
C+ + + E S DV Y +L L++L RE
Sbjct: 417 CRSGRIAEAYEAFDYAVESKSLTDVSAYLSLESTLKSLKNARE 459
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 149/354 (42%), Gaps = 54/354 (15%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE-ILNCMINDG---------------- 164
LI+ Y QDS+ +F + + N + IL ++ G
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
C D T +++++ +C + L +Q+M+K G+ +V Y V+ KK +
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYL--MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 286
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLN----------GVIVQEDYVK--------------- 259
A+ +L+ MKS G+ D+ Y M+++ G ++ D K
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Query: 260 ----------AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
A +L +E+L GL P+ T+N I+G + N + +KM ME G P
Sbjct: 347 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
++Y LL LCK E + R MK G+ + TY+ MIDGL G + EA LL
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E G+ + I G C+ G + A E++ ++ +SP ++ L+
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 119/235 (50%), Gaps = 2/235 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++L +C+ + D GF MK+ G C G + YT +I L K + +A+ +LN+M
Sbjct: 412 GVLLDGLCKNAEF--DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
DGI PDIV Y+ ++NG + A+E+ + +GL P+ Y+ I C+ +
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ I++ M G D T+N L+ +LCK ++ E ++ M GI+ N ++ +
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I+G + G+ ++A + +E G + + GLC+ G +R+A + LK +
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 148/347 (42%), Gaps = 44/347 (12%)
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+N F K+ +F+ A EI+ + G +G S ++ + C L E + +
Sbjct: 485 INGFCKVGRFKT-----AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK--EAIRIYE 537
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
M G + ++ SL K KV +A + M SDGI P+ V + ++NG
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ +KA +FDE+ +G P +TY + GLCK ++ K + + + + D + YN
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 657
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TLL A+CK L + L EM + I+ + TY+ +I GL KG + A +EA +
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 717
Query: 376 G---------LCTQSSMF---------------------------DETICGLCQRGLVRK 399
G C MF + I G + G + K
Sbjct: 718 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEK 777
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+LL +M +++ P + +LL SK V+TSF+ ILN
Sbjct: 778 TNDLLPEMGNQNGGPNLTTYN-ILLHGYSKRKDVSTSFLLYRSIILN 823
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 116/231 (50%), Gaps = 2/231 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ S+VK + L +M I PD+ + +++N + + + K+ L ++ G
Sbjct: 204 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 263
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P + TYN ++ CK+ +A I+++ M+ G DV TYN L+ LC+ + +
Sbjct: 264 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 323
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L+++M+ + I N TY+ +I+G +++G ++ A LL E L+ GL F+ I G
Sbjct: 324 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
G ++AL++ M K ++P + LL L ++ D ++R+
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 38/343 (11%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
F+F L+ TY + ++ ++ R + ++EI M GF TC+ I
Sbjct: 146 SFVFGALMTTYRLCNSNPSVYDILIRV-YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 204
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L SV + + S + F++EM K C + + +I L + + ++ +M+
Sbjct: 205 LGSVVKSGEDVS--VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 262
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G P IV Y VL+ + + A EL D + G+ DV TYN+ I+ LC+ N + G
Sbjct: 263 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 322
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ M + P+ +TYNTL+ ++ +L+ EM G+ N T++ +IDG
Sbjct: 323 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 382
Query: 356 LASKGDIIEAC------------------GLLEEALNK-----------------GLCTQ 380
S+G+ EA G+L + L K G+C
Sbjct: 383 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 442
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ G + +A+ LL +M+ + P + AL+
Sbjct: 443 RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +IR +++ + D+L I M G P + +L V+ + V E+L
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ PDV T+N+ IN LC + + E ++ ME+ G P ++TYNT+L CK
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL+ MK KG+ ++ TY+++I L I + LL + + + ++ I
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
G G V A +LL +M +SP + AL+ +S+ +F
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 37/311 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R AIE+L+ M + G D T ++++ +C ++ LL +++M+K V
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL--LRDMRKRMIHPNEV 339
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + KV A +LN+M S G+ P+ V + +++G I + ++ +A ++F +
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 268 LVLGLVPDVYTYNVYINGLCK---------------QNNVEAG----------------- 295
GL P +Y V ++GLCK +N V G
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 296 ---IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M + G PD++TY+ L+ CKV +E+V + G+ N YS +
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G + EA + E + +G F+ + LC+ G V +A E ++ M +
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 413 SPGARVWEALL 423
P ++ L+
Sbjct: 580 LPNTVSFDCLI 590
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%), Gaps = 1/237 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F ++M LG +V +I + K+ +L +M + P++ Y ++L+G
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
++D + L+ +++ G++PD T + + G+C+ N +E G+K++ G + D
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+N L+ C E+N +LVK M GI L+ T M+ L E+ +L E
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+G+ +S + I GLC+ G ++ A + ++M + P V E+ ++ +++K
Sbjct: 926 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP-PNVAESAMVRALAK 981
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 42/305 (13%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFC 203
+ +V A E + CM +DG + + +++ S + L F EM K+G
Sbjct: 560 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN----SGEGLKAFSVFDEMTKVGHH 615
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
Y ++++ L K + +A L + + D V Y +L + + KA L
Sbjct: 616 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNV------------------------------- 292
F E++ ++PD YTY I+GLC++
Sbjct: 676 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 735
Query: 293 -----EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+AGI M+ LG PD++T N ++ ++ ++ + +L+ EM + NL
Sbjct: 736 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 795
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I++ G + + D+ + L + G+ + G+C+ ++ L++LK
Sbjct: 796 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 855
Query: 408 ADKDV 412
+ V
Sbjct: 856 ICRGV 860
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + ++IL I G VD T ++++S C ++ + V+ M LG
Sbjct: 843 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI--NWAFDLVKVMTSLGISLDKD 900
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
++ L + + ++ +L++M GI P+ Y ++NG+ D A + +E+
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + P + + L K + ++ M ++ P + ++ TL+ CK +
Sbjct: 961 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 1020
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL M G+ L+L +Y+++I GL +KGD+ A L EE G ++ +
Sbjct: 1021 IEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1080
Query: 388 ICGLCQR 394
I GL R
Sbjct: 1081 IRGLLAR 1087
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 3/248 (1%)
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
VD + +L+++C+ +L+ + + EM + YT++I L +K K A+
Sbjct: 651 VDTVMYNTLLTAMCKSGNLA--KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 227 GILNQMKSDG-IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++ G + P+ V YT ++G+ + +++ LG PD+ T N I+G
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+ +E ++ M P++ TYN LL K ++++ L + + GI+ +
Sbjct: 769 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
T ++ G+ + +L+ + +G+ F+ I C G + A +L+K
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888
Query: 406 QMADKDVS 413
M +S
Sbjct: 889 VMTSLGIS 896
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 2/219 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD-IVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++ K++ V + + + +GI PD + C+++VL G+ ++
Sbjct: 794 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL-GICESNMLEIGLKIL 852
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ G+ D YT+N+ I+ C + ++ M LG D T + ++ L +
Sbjct: 853 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 912
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R ++ EM +GI + Y +I+GL GDI A + EE + +C +
Sbjct: 913 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 972
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ L + G +A LL+ M + P + L+
Sbjct: 973 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+DE ++ M K+ + +T ++ K V +AL + M + G+K D+V Y +
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1044
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++ G+ + D A EL++E+ G + + TY I GL + +G +I
Sbjct: 1045 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1097
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 1/218 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++I L K E+ +A +L +M G PDI YT ++ G + A +F++
Sbjct: 55 VTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQ 114
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITYNTLLQALCKVR 325
L+ G PDV TY+ I+GLCK+ ++ I + M + GS P+ +TYN+L+ C++
Sbjct: 115 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 174
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ L++ M G ++ TY+ +++G + +A LL + KGL F
Sbjct: 175 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFT 234
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ + A+ +L +M K SP + +L
Sbjct: 235 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 272
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 123/236 (52%), Gaps = 3/236 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++S +C+ S E ++EM G + YT +I K +K DAL + Q+ +
Sbjct: 60 LISGLCKAERAS--EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 117
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG-LVPDVYTYNVYINGLCKQNNVE 293
G +PD+V Y+ +++G+ + +A +LF ++ G +P+ TYN I+G C+ ++
Sbjct: 118 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 177
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ ++ M E GS PDV+TY TL+ CK+ L+ +L+ +M KG+ N+ T++ ++
Sbjct: 178 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLM 237
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
DGL + + +A +L E K ++ + G C+ + +A + + + D
Sbjct: 238 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD 293
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 140/285 (49%), Gaps = 22/285 (7%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKI--PKFRINRVGF---------------AIEILNC 159
F + LI + + + D++ +F ++ FR + V + AI++
Sbjct: 90 FTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGR 149
Query: 160 MINDGFCVDGK-TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
MI G C+ T + ++S C + DE + ++ M + G +V YT ++ K
Sbjct: 150 MIKSGSCMPNTVTYNSLISGFCRMGKM--DEAMNLLERMAETGSSPDVVTYTTLMNGFCK 207
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
++ DA +LNQM G+ P++V +T +++G+ + A + E+ P VYT
Sbjct: 208 LARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYT 267
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN ++G C+ N +E K + +EE+ P+V+++N +++ LCKV + ELV+E +
Sbjct: 268 YNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 325
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ ++ Y+ +ID L + + EAC + + L + C +S+
Sbjct: 326 RRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSI 370
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 1/186 (0%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P V Y +++G+ E +A +L +E++ G +PD++TY I G CK + +++
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL-NLQTYSIMIDGLA 357
+ G +PDV+TY+ L+ LCK L +L M G + N TY+ +I G
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G + EA LLE G + + G C+ + A +LL QM K ++P
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 418 VWEALL 423
+ +L+
Sbjct: 232 TFTSLM 237
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VP TYN I+GLCK ++ M G PD+ TY TL+ CK ++ +
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGL 391
+ +++ +G ++ TYS +IDGL +G + EA L + G C +++ ++ I G
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
C+ G + +A+ LL++MA+ SP + L+ +++LD
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 212
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 41/233 (17%)
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
++L++ A+ D V + F ++ R+ A ++LN M G +
Sbjct: 180 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPN---------- 229
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+V +T+++ L ++ ++ DA+ IL +M+
Sbjct: 230 ---------------------------VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS 262
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P + Y +L+G +A + L + P+V ++N+ I GLCK N +++
Sbjct: 263 PTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMEL 320
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM-KWKGIVLNLQTYS 350
+ PDV+ Y T++ LC+ ++++ + ++M + G + N TYS
Sbjct: 321 VEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYS 373
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A I M+ G D +L++ + C+ ++ D + +++M+K + +
Sbjct: 498 AFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNM--DRAIRILEKMQKERMQPSNRAFRPI 555
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + AL IL+ M+ G P ++ Y +++G+I + +A + +++ + G+
Sbjct: 556 IEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGI 615
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +TY + + G ++ + ++E G K DV Y TLL+A CK +
Sbjct: 616 TPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALA 675
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +EM + I N Y+I+IDG A +GD+ EA L+++ G+ + I C
Sbjct: 676 VTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACC 735
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G +++A +++++MAD + P + + L+
Sbjct: 736 KAGDMQRAQKVIEEMADVGLKPNLKTYTTLI 766
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 123/264 (46%), Gaps = 35/264 (13%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ +K+ F ++ Y +I +K KV A+ I +M+S GIK + Y+M+++G I
Sbjct: 433 ERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHL 492
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE---------- 304
D+ A +F+E+L GL PD YN+ I CK N++ I+++ M++
Sbjct: 493 HDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAF 552
Query: 305 -------------------------LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
G P V+TYN L+ L K ++ R ++ +M
Sbjct: 553 RPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSI 612
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
GI N TY+I++ G A+ GDI +A + GL +++ + C+ G ++
Sbjct: 613 AGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQS 672
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL + ++M+ + ++ V+ L+
Sbjct: 673 ALAVTREMSTQKIARNTFVYNILI 696
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 2/284 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI IL M + + I+ D+ L + M++ G ++ Y +
Sbjct: 533 AIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK--RALNILDLMRRSGCAPTVMTYNAL 590
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L+KK +V A+ +LN+M GI P+ YT+++ G D KA E F ++ GL
Sbjct: 591 IHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGL 650
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
DVY Y + CK +++ + + M + YN L+ + ++ +
Sbjct: 651 KLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAAD 710
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+K+MK G+ N+ TY+ I+ GD+ A ++EE + GL + I G
Sbjct: 711 LMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWA 770
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ L +AL+ ++M + P + L+ S +S+ + S
Sbjct: 771 KASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGS 814
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 109/218 (50%), Gaps = 2/218 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N+V A+ +LN M G + T ++I+ D+ + + ++K+ G +
Sbjct: 598 NQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIG--KAFEYFTKIKEGGLKLDVY 655
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++R+ K ++ AL + +M + I + Y ++++G + D +A +L ++
Sbjct: 656 IYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQM 715
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ P+++TY YIN CK +++ K+I M ++G KP++ TY TL++ K
Sbjct: 716 KEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLP 775
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+R + +EMK G+ + Y ++ L S+ ++E
Sbjct: 776 DRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEG 813
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 173/436 (39%), Gaps = 57/436 (13%)
Query: 3 RSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQ------QQ 56
R+ A +RA R SP WHQ +++A + ++ + + P Q ++
Sbjct: 210 RARAEERARWVDHGRRPEARSP----WHQ--GREEACREFRRVVESRPEDWQAVVSAFER 263
Query: 57 IPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE 116
IPK P + +I A+ + +++ R E
Sbjct: 264 IPK------------------PSRREFGLMIVYYAKRGDKHHARATFENMRAR-GIEPNA 304
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC---MINDGFCVDGKTCS 173
F+F L+ YA A + +L+C M +G + T S
Sbjct: 305 FVFTSLVHAYAVARDMRG---------------------VLSCVEEMKAEGIELTIVTYS 343
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+I++ + D S + L F + KLG G++ Y+N+I + + + A ++ +M+
Sbjct: 344 IIIAGFAKINDAQSADNL-FKEAKAKLGDLNGII-YSNIIHAHCQSGNMDRAEELVREME 401
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
DGI I Y +++G + +D K +F+ L P + +Y IN K V
Sbjct: 402 EDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVT 461
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
I + ME G K + TY+ L+ + + + +EM G+ + Y+++I
Sbjct: 462 KAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLI 521
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ G++ A +LE+ + + + F I G G +++AL +L M +
Sbjct: 522 EAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCA 581
Query: 414 PGARVWEALLLSSVSK 429
P + AL+ + K
Sbjct: 582 PTVMTYNALIHGLIKK 597
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K+ A M++ GI+P+ +T +++ V D +E+ G+ +
Sbjct: 280 AKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTI 339
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
TY++ I G K N+ ++ + + + I Y+ ++ A C+ ++R ELV+E
Sbjct: 340 VTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVRE 399
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR-G 395
M+ GI + Y M+ G D + C ++ E L + T S + + L + G
Sbjct: 400 MEEDGIDAPIDAYHSMMHGYTIIQDE-KKCLIVFERLKECCFTPSIISYGCLINLYIKIG 458
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
V KA+ + K+M + + + L+ + DF N
Sbjct: 459 KVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANA 498
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 130/259 (50%), Gaps = 3/259 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
++++ +I + T +L++ + C + L+ + L + M+ G V Y +
Sbjct: 192 SLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA--DALATLSTMQGFGLSPDAVTYNTL 249
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + +K + +A +L +MK DGI P Y +++ +A ++ + + G
Sbjct: 250 LNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGF 309
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK-PDVITYNTLLQALCKVRELNRLR 331
PD+ TYNV GLC+ V+ ++ ME LG+ PDV+TYNTL+ A K R +
Sbjct: 310 EPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDAL 369
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L++EM+ KG+ L T++I++ L +G + EA G LE+ +GL ++ I
Sbjct: 370 RLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAY 429
Query: 392 CQRGLVRKALELLKQMADK 410
C+ G V KA L+ +M K
Sbjct: 430 CKAGNVAKAFTLMDEMVGK 448
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCF 204
+ V A +++ M+ G +D T + +L ++C+ +R ++ELL + GF
Sbjct: 431 KAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELL---HSPPQRGFVP 487
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y V+ + K+ AL + +QM + P I Y ++ G+ E +A +
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+E + GLVPD TYN+ I+ CK+ ++E + M E KPDV+T NTL+ LC
Sbjct: 548 NEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L++ +L + KG +++ TY+ +I + GD+ A ++ KGL + +
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667
Query: 385 DETICGLCQRGLVRKALELLKQMAD 409
+ + L + G +A +L ++AD
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLAD 692
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 11/295 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF- 204
R+ + A +++ M GF D +T +++ +C+ + DE EM++LG
Sbjct: 290 RLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKV--DEAFRLKDEMERLGTALP 347
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI----VQEDYVKA 260
+V Y ++ + K DAL +L +M+ G+KP +V + +V+ + ++E K
Sbjct: 348 DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKL 407
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
E++ +E GL PDV TYN I+ CK NV ++ M G K D T NT+L
Sbjct: 408 EKIAEE----GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK++ EL+ +G V + +Y ++ + + A L ++ + + L
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
S ++ I GLC+ +++A++ L + +K + P + ++ + + D N
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 144/316 (45%), Gaps = 20/316 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF--- 139
++ V+K+L + + + L+ I + E + LI Y A + L
Sbjct: 387 HNIVVKSLCKEGKLEEALGKLEKIAE-EGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
Query: 140 ----YKIPKFRINRVGF----------AIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
K+ F +N V + A E+L+ GF D + ++++ ++
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYF--KEY 503
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ + L +M + + Y +I+ L + E++ +A+ LN+ G+ PD Y
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYN 563
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++++ + D A ++++ PDV T N +NGLC ++ +K+ E
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G K DVITYNTL+Q++CKV +++ +M+ KG+ + TY++++ L+ G EA
Sbjct: 624 GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683
Query: 366 CGLLEEALNKGLCTQS 381
+L + + G +QS
Sbjct: 684 HNMLHKLADSGKLSQS 699
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S + L ++EM+ G +V + V++SL K+ K+ +ALG L ++ +G+ PD++ Y
Sbjct: 365 SSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNT 424
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ + KA L DE++ GL D +T N + LCK E +++ + G
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD ++Y T++ A K L +M + ++ ++ TY+ +I GL + EA
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAI 544
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L E + KGL + ++ I C+ G + A +M + P
Sbjct: 545 DKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKP 592
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 4/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ L + +G D T + ++ + C+ +++ + + EM G V
Sbjct: 403 ALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVA--KAFTLMDEMVGKGLKMDTFTLNTV 460
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +L K ++ DA +L+ G PD V Y V+ + + A L+D+++ L
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P + TYN I GLC+ ++ I + E G PD TYN ++ A CK +L
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+M ++ T + +++GL G + +A L E + KG ++ I +C
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ G V AL M K + P A + +L LS + + + +L D
Sbjct: 641 KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADS 693
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEEL--FDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G++P + VL+ + + L F L+ L L P+ YT+N+ ++ C + +
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ ++ M+ G PD +TYNTLL A C+ L R L+ MK GI TY+ ++
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
A G I +A ++E G ++ GLCQ G V +A L +M
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM 339
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 24/300 (8%)
Query: 131 RFQDSVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCVDGKTCS 173
R++D+ L + P+ F + V + A+ + + MI T +
Sbjct: 469 RYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYN 528
Query: 174 LILSSVCEQRDLSS--DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
++ +C L D+L FV++ G Y +I + K+ + +A N+
Sbjct: 529 TLIKGLCRMERLKEAIDKLNEFVEK----GLVPDETTYNIIIHAYCKEGDLENAFRFHNK 584
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M + KPD+V ++NG+ + KA +LF+ + G DV TYN I +CK +
Sbjct: 585 MVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGD 644
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
V+ + ME G +PD TYN +L AL + ++ ++ G + +
Sbjct: 645 VDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPL 704
Query: 352 MIDGLASKGDIIEACGLLE-EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+ A + D+ E G E E+ K + E + GLC G +++A +L +M K
Sbjct: 705 LKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQK 764
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
GL PD TYN +N C++ + ++A M+ G P TYNTL+ A ++ + +
Sbjct: 237 FGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQ 296
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
++V+ M G +L+TY+++ GL G + EA L +E G + T+
Sbjct: 297 ATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLV 356
Query: 390 GLCQRGLVRK-ALELLKQMADKDVSP 414
C + AL LL++M DK V P
Sbjct: 357 DACFKWRCSSDALRLLEEMRDKGVKP 382
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 77/176 (43%), Gaps = 4/176 (2%)
Query: 271 GLVPDVYTYNVYINGLCKQNNV--EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P + N ++ L + + +A + + + EL P+ T+N L+ C L
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ M+ G+ + TY+ +++ KG + EA LL G+ ++ +
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ G +++A ++++ M P R + L + + + V+ +F RL D++
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAM-GLCQAGKVDEAF-RLKDEM 339
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 112/209 (53%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +K + + + N M+ G++PD+ Y++++NG+ + A LFD
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFD 230
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 231 EMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 291 DLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + + P
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLNVGLKP 379
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 150/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ Y++ K RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIEC-YRLTKEHKFRVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + +
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + V G+ PDVYTY+V INGLCK++ ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ M + G P+ +T+ TL+ CK ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E + KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 105/206 (50%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA + ++M G+ P+ V +T +++G A E++ ++L
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L PD+ TYN I GLCK+ +++ +I M G PD ITY TL+ CK +L
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E LN GL + + I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
C++G V +LLK+M P
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C++ + +L EM G V +T
Sbjct: 190 GFRLK--NAMQVSGVQPDVYTYSVLINGLCKESKMDDANVL--FDEMLDKGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+++
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
>gi|91806015|gb|ABE65736.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 360
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 137/269 (50%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N G + T S+ ++ C + LS L + +M KLG+
Sbjct: 87 KMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSL--ALAILGKMMKLGYGPS 144
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +++ ++ +A+ +++QM G +PD V +T +++G+ +A L +
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++V G PD+ TY INGLCK+ + + ++ ME+ + DV+ YNT++ LCK +
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L +M+ KGI ++ TY+ +I L + G +A LL + L K + F+
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I + G + +A +L +M + + P
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKRSIDP 353
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +LS++ + D ++ ++M+ LG + Y+ I ++ ++ AL IL +M
Sbjct: 79 SKLLSAIAKMNKF--DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKM 136
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G P IV +LNG +A L D+++ +G PD T+ ++GL + N
Sbjct: 137 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M G +PD++TY ++ LCK E + L+ +M+ I ++ Y+ +
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDGL + +A L + KG+ ++ I LC G A LL M +K++
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 413 SPGARVWEALL 423
+P + AL+
Sbjct: 317 NPDLVFFNALI 327
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 117/241 (48%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
+DL D+ +G +M K +V+++ ++ ++ K K + + QM++ GI ++
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y++ +N + A + +++ LG P + T N +NG C N + + ++ M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E+G +PD +T+ TL+ L + + + LV+ M KG +L TY +I+GL +G+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A LL + + +++ I GLC+ + A +L +M K + P + L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 423 L 423
+
Sbjct: 292 I 292
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
N+ R +++ K+ DA+G+ M P IV ++ +L+ + + L +++ L
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ ++YTY+++IN C+++ + + ++ M +LG P ++T N+LL C ++
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
LV +M G + T++ ++ GL EA L+E + KG + I G
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+RG AL LL +M + ++ ++
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ N+ A+ ++ M+ G D T +++ +C++ + D L + +M+K
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE--PDLALNLLNKMEKGKIEA 248
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y +I L K + + DA + N+M++ GIKPD+ Y +++ + + A L
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNN-VEA 294
++L + PD+ +N I+ K+ VEA
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 146/308 (47%), Gaps = 20/308 (6%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
++ F LI +D +LF K +IN + + NC++N+ +C +GK
Sbjct: 232 QYTFTVLINGLFKKGLKKDGFDLF---EKMKINGLFPNLYTYNCLMNE-YCGEGK----- 282
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+C DL EM++ G +V Y +I + ++E+V++A +++QMK
Sbjct: 283 ---ICRAFDL--------FDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKA 331
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
+ P+++ Y ++ G + KA L D+L GL P + TYN+ I G K N +
Sbjct: 332 AVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGV 391
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ ME G P +T L+ A +++E+ + ++ M+ G+V ++ Y ++I G
Sbjct: 392 ADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHG 451
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L KG++ E+ L + +++ I G C+ +AL LL++M K + P
Sbjct: 452 LCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPN 511
Query: 416 ARVWEALL 423
+ +++
Sbjct: 512 VASYSSII 519
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 179/404 (44%), Gaps = 38/404 (9%)
Query: 33 LDQQQAKQNVKQSLTTPPTKQ--------QQQIPKQPHILSSLLHSFSIYNCEPPPEAYH 84
+ +QQA +++ + PP + QQ H +S LL + + P A
Sbjct: 1 MGKQQALILIQKMVKIPPLQALSLFNSSIQQGFQHTHHSISFLLQH--LLDHHKLPHAQS 58
Query: 85 FVIKTLAE--NSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
+++ L+ +S F + S+L H+ + +N P L ++ +AH
Sbjct: 59 LILQILSNKISSPFFTVPSLLHHLTQNQN---PSMTTALLYESIINAH------------ 103
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
+ + A+ N M++ G + +L S+ L F E+K+
Sbjct: 104 --LKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWL--FFNELKER-V 158
Query: 203 CFGMVDYTNVIRSLVKK---EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
F + + +I+ + +K F LG+L M G+ P++V YT +++G D +
Sbjct: 159 KFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDM---GLSPNVVIYTTLIDGCCKNGDIER 215
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A FD++ +GLV + YT+ V INGL K+ + G + M+ G P++ TYN L+
Sbjct: 216 ARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMN 275
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
C ++ R +L EM+ +G+ N+ TY+ +I G+ + + EA L+++ +
Sbjct: 276 EYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSP 335
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G C G + KA LL Q+ +SP + L+
Sbjct: 336 NLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILI 379
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 29/232 (12%)
Query: 96 FCDI------SSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQDSVNLFYKIPKFRIN 148
FCD+ SS+LD + + N +P + + LI+ Y+ A ++ +L +
Sbjct: 347 FCDVGNLDKASSLLDQL--KSNGLSPSLVTYNILIEGYSKAGNWKGVADLARE------- 397
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
M G TC++++ + +++ ++ M+K G +
Sbjct: 398 -----------MEGRGISPSKVTCTVLIDAYVRLQEM--EKAFQIYSSMEKFGLVPDVYV 444
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K + ++ + M ++P V Y +++G +++ +A L E+
Sbjct: 445 YGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREME 504
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
GLVP+V +Y+ I LCK E ++ M EL KP N + +A
Sbjct: 505 AKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 111/209 (53%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +K + + + N M++ G++ D+ Y++++NG+ A ELFD
Sbjct: 171 VVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFD 230
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L GLVP+ T+ I+G CK V+ +++ M PD+ITYNTL+ LCK
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L + ++L+ EM KG+ + TY+ +IDG +GD+ A + + + + +
Sbjct: 291 DLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYT 350
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I GLCQ G A ++L++M + P
Sbjct: 351 ALISGLCQEGRSVDAEKMLREMLSVGLKP 379
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 113/227 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M+ G + Y+ +I L K K+ DA + ++M +G+ P+ V +T +
Sbjct: 188 DEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L L PD+ TYN I GLCK+ +++ +I M G
Sbjct: 248 IDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L E K M + I L+ Y+ +I GL +G ++A
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+L E L+ GL + + I C++G V L+LLK+M P
Sbjct: 368 MLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMP 414
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 148/307 (48%), Gaps = 20/307 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
++F LI Y ++ +D++ + I + + RV F TC +L
Sbjct: 67 YVFSGLITAYLESGFLRDAIECYRLIKEHKF-RVPF-----------------DTCRKVL 108
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + + + GF +E + G+ + + ++ S VK+ ++ A + + +
Sbjct: 109 EHLMKLKYFKL--VWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWS 166
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++P +V + ++NG I D + L + + G+ DVYTY+V INGLCK + ++
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDAN 226
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G P+ +T+ TL+ CK R ++ E+ K+M + + +L TY+ +I GL
Sbjct: 227 ELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGL 286
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KGD+ +A L++E KGL + I G C+ G + A E K+M +++
Sbjct: 287 CKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDD 346
Query: 417 RVWEALL 423
+ AL+
Sbjct: 347 VAYTALI 353
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ N M G D T S++++ +C+ + D+ EM G V +T
Sbjct: 190 GFRLK--NAMQASGVQSDVYTYSVLINGLCKASKM--DDANELFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDG 411
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ K+ + + + + +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ TYS++I+GL + +A L +E L+ GL
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ V A+E+ KQM + +SP + L+ K D
Sbjct: 243 TFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 292
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 97/196 (49%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M+++G +G T + ++ C+ R + D + ++M ++ Y +
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRV--DVAMEIYKQMLSQSLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+GLC++ KM+ M +G KP++ TY ++ C+ ++ +
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G + ++ T
Sbjct: 403 LLKEMQRDGYMPSVVT 418
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 201/479 (41%), Gaps = 69/479 (14%)
Query: 2 VRSSALKRANLHLRKHRKWPLSPYKAK-WHQTLDQQQAKQNVK----------QSLTTPP 50
+ S A K NL L + + P+ ++ W +T +++ N++ QS P
Sbjct: 9 IASKANKFLNLCLLQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPS 68
Query: 51 ----TKQQQQIPKQPH--ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLD 104
+K +I K + ++ SL H + +Y+ VI L S+F SV+
Sbjct: 69 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 128
Query: 105 HIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF-----------------RI 147
+ K +E LI + +R D+++L K+ + +I
Sbjct: 129 KMMKF-GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
V A+E+ + M DG D T + +++ +C S L +++M ++
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL--MRDMVMRDIVPNVI 245
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+T VI VK+ K +A+ + +M + PD+ Y ++NG+ + +A+++ D +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG--------------------- 306
+ G +PDV TYN ING CK V+ G K+ M + G
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 307 -----------SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
S+P++ TY+ LL LC + + L + M+ I L++ TY+I+I G
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ G++ +A L KGL + I G C++ K+ L ++M + + P
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 154/328 (46%), Gaps = 12/328 (3%)
Query: 98 DISSVLDHIEKRENFETPEFIF--IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
D S VL I K +N++ +F +++ D + + +N + +F I A+
Sbjct: 71 DFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVI-----ALS 125
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
++ M+ G+ D T S +++ C+ + + + V +M+++GF +V Y +I
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVF--DAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K V DA+ + ++M+ DG++ D V Y ++ G+ + A L ++++ +VP+
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V T+ I+ K+ +K+ M PDV TYN+L+ LC ++ ++++
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M KG + ++ TY+ +I+G + E L E +GL + ++ I G Q G
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
A E+ +M D P R + LL
Sbjct: 364 RPDAAQEIFSRM---DSRPNIRTYSILL 388
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 111/218 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+VD++ V+ + K + + + + M+ GI D+ Y +V+N + +V A +
Sbjct: 69 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 128
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ G PDV T + ING C+ N V I +++ MEE+G +PDV+ YNT++ CK+
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N EL M+ G+ + TY+ ++ GL G +A L+ + + + + F
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G +A++L ++M + V P + +L+
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P IV ++ VL+ + ++Y LF + V G+ D+Y+YN+ IN LC+ + + +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M + G +PDV+T ++L+ C+ + +LV +M+ G ++ Y+ +IDG
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + +A L + G+ + ++ + GLC G A L++ M +D+ P
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 419 WEALL 423
+ A++
Sbjct: 247 FTAVI 251
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%)
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+LF +++ +P + ++ ++ + K N + I + ME G D+ +YN ++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ +V +M G ++ T S +I+G + +A L+ + G
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+++ I G C+ GLV A+EL +M V A + +L+
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 164/350 (46%), Gaps = 17/350 (4%)
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCD---ISSVLDHIEKRENFETPEFIF 119
+ +SL+ SF + C + H + K + D I++ +D + K E +F
Sbjct: 511 VYTSLIRSF--FKCGRKEDG-HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALF 567
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFA---IEILNCMINDGFCVDGKTCSLIL 176
++ +AH F Y I + + G A E+ M G +D + ++
Sbjct: 568 REI-----NAHGFIPDARS-YSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVI 621
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
C+ ++ L ++EMK G +V Y +VI L K +++ +A + + KS+G
Sbjct: 622 DGFCKSGKVNKAYQL--LEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 679
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
IK ++V Y+ +++G +A + +EL+ GL P+VYT+N ++ L K + +
Sbjct: 680 IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 739
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
M++L P+ ITY+ L+ LC+VR+ N+ +EM+ G+ N TY+ MI GL
Sbjct: 740 ICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGL 799
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
A G+I+EA GL G S+ ++ I GL A L ++
Sbjct: 800 AKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 849
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ ++M G G + YT++IRS K + D I +M G PD+
Sbjct: 491 DDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTY 550
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ V + K LF E+ G +PD +Y++ I+GL K ++ M+E G
Sbjct: 551 MDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGC 610
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
D YN ++ CK ++N+ +L++EMK KG + TY +IDGLA + EA
Sbjct: 611 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYM 670
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L EEA + G+ ++ I G + G + +A +++++ K ++P W LL ++
Sbjct: 671 LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC-LLDAL 729
Query: 428 SKLDFVNTSFI 438
K + +N + I
Sbjct: 730 VKAEEINEALI 740
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 163/360 (45%), Gaps = 24/360 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
++ + + P AY +I L+E + D +L H + +E +F LI+ +
Sbjct: 182 IIQTMRKFKFRPAFSAYTILIGALSEVRE-PDPMLILFHQMQELGYEVNVHLFTTLIRVF 240
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A R +++L + + + N + I + N C+D C +
Sbjct: 241 AREGRVDAALSL---LDEMKSNSLDADIVLYN------VCID-----------CFGKAGK 280
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D F EMK G V YT++I L K ++ +A+ + Q++ + P Y
Sbjct: 281 VDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNT 340
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ G + +A L + G +P V YN + L K+ VE +++ M+
Sbjct: 341 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-D 399
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+ P+V TYN L+ LC+ +LN E+ +M+ G+ N+ T +IMID L + EAC
Sbjct: 400 AVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC 459
Query: 367 GLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ E ++ +CT +++ F I GL + G V A L ++M D PGA V+ +L+ S
Sbjct: 460 SIF-EGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRS 518
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 147/344 (42%), Gaps = 57/344 (16%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
PEAY+ ++ +A N++F + +L+ + F I I+L+ + + +++ ++
Sbjct: 125 PEAYNSLLMVMARNTEFDHLERILEEMS-LSGFGPSSNISIELVANCVKSRKLREAFDII 183
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
+ KF+ R F+ ++++ ++ E R+ D +L +M++
Sbjct: 184 QTMRKFKF-RPAFS-----------------AYTILIGALSEVRE--PDPMLILFHQMQE 223
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
LG+ + +T +IR ++ +V AL +L++MKS+
Sbjct: 224 LGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS----------------------- 260
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
L D+ YNV I+ K V+ K M+ G PD +TY +++
Sbjct: 261 ------------LDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIG 308
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK L+ EL ++++ V Y+ MI G S G EA GLLE KG
Sbjct: 309 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 368
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + L ++ V +AL + ++M +D P + L+
Sbjct: 369 SVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILI 411
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 153/406 (37%), Gaps = 93/406 (22%)
Query: 98 DISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL 157
D+S H K + + +I A+R ++V LF ++ + R +A
Sbjct: 282 DMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYA---Y 338
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
N MI G+ GK DE G ++ K G ++ Y ++ L
Sbjct: 339 NTMIM-GYGSAGKF----------------DEAYGLLERQKAKGSIPSVIAYNCILTCLG 381
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
KK +V +AL I +MK D + P++ Y ++++ + + A E+ D++ GL P+V
Sbjct: 382 KKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVL 440
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEE--------------------------------- 304
T N+ I+ LCK +E + M++
Sbjct: 441 TVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKM 500
Query: 305 --LGSKPDVITY-----------------------------------NTLLQALCKVREL 327
G P I Y NT + + K E
Sbjct: 501 LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGET 560
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ R L +E+ G + + ++YSI+I GL G E L +G + ++
Sbjct: 561 EKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAV 620
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
I G C+ G V KA +LL++M K P + +++ L+ + +LD
Sbjct: 621 IDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 666
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF D ++ S+++ + + ++E MK+ G Y VI K KV
Sbjct: 574 GFIPDARSYSILIHGLVKAG--LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 631
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A +L +MK G P +V Y V++G+ + +A LF+E G+ +V Y+ I
Sbjct: 632 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 691
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G K ++ ++ + + G P+V T+N LL AL K E+N + MK
Sbjct: 692 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP 751
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N TYSI+I+GL +A +E GL + + I GL + G + +A L
Sbjct: 752 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 811
Query: 404 LKQMADKDVSPGARVWEALL--LSSVSK 429
+ P + + A++ LSS +K
Sbjct: 812 FSRFKANGGIPDSASYNAMIEGLSSANK 839
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++E+ + G + + ++ +LVK E++ +AL MK P+ + Y+++
Sbjct: 701 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSIL 760
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ + KA + E+ LGL P+ TY I+GL K N+ + + + G
Sbjct: 761 INGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGG 820
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD +YN +++ L + L +E + KG ++ +T +++D L K + +E
Sbjct: 821 IPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL-HKAECLEQAA 879
Query: 368 LLEEALNKGLCTQSS 382
++ L + +Q +
Sbjct: 880 IVGAVLKETAKSQHA 894
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 162/401 (40%), Gaps = 45/401 (11%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+LH +C P Y ++ Q +L + + E IF LI Y
Sbjct: 301 ILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNRE-IFNSLIHAY 359
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ + + LF K+ K C G+ V ++ + SVC +
Sbjct: 360 CKSRDYSYAYKLFKKMIK--------------CGCQPGYLV----YNIFIGSVCSNEEQP 401
Query: 187 SDELLGFVQ----EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
S ++L V+ EM LG V+ +N R L K A I+ +M G PD
Sbjct: 402 SSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDS 461
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y+ V+ + KA LF+E+ G+VP VYTY + I+ CK ++ K M
Sbjct: 462 TYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEM 521
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G P+V+TY L+ A K +++ EL + M +G N+ TY+ +IDG G I
Sbjct: 522 LHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQI 581
Query: 363 IEACGLLEEALNKGLCTQSSM-----FDETIC-------------GLCQRGLVRKALELL 404
+AC + A +G S M D C GLC+ V++A ELL
Sbjct: 582 EKACQIY--ARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELL 639
Query: 405 KQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
M P V++A++ + KL F ++ ++
Sbjct: 640 DTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 107/202 (52%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y ++ L K +V +A +L+ M + G +P+ + Y V++G A+E+F
Sbjct: 616 VITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFT 675
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G P++YTY+ +I+ L K N ++ +K+++ M E P+V+ Y ++ LCK+
Sbjct: 676 KMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIG 735
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + +L+ +M+ KG N+ TY+ MIDG G I + L + +KG +
Sbjct: 736 KTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYR 795
Query: 386 ETICGLCQRGLVRKALELLKQM 407
I C GL+ +A +LL +M
Sbjct: 796 VLINHCCSNGLLDEAYKLLDEM 817
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 133/311 (42%), Gaps = 12/311 (3%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
R +++ A + M++ F +D T S S+C + E + E + F
Sbjct: 222 LRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLC--KGGKCREAFDLIDEAED--FVP 277
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y ++ L + +A+ IL++M+S P++V Y ++L+G + + + + +
Sbjct: 278 DTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRIL 337
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G P+ +N I+ CK + K+ M + G +P + YN + ++C
Sbjct: 338 SMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSN 397
Query: 325 RE------LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
E L+ + + EM G+VLN S L G +A ++ E + KG
Sbjct: 398 EEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFV 457
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
S + + I LC V KA L ++M + P + +L+ S K + +
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTY-TILIDSFCKAGLIQQA-R 515
Query: 439 RLVDQILNTPC 449
+ D++L+ C
Sbjct: 516 KWFDEMLHKGC 526
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P+++ Y +++G+ +A EL D +L G P+ Y+ I+G CK ++ ++
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M E G P++ TY++ + L K L+ + +++ +M N+ Y+ M+DGL
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733
Query: 359 KGDIIEACGLL----EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G EA L+ E+ N + T ++M D G + G + + LEL + M K +P
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMID----GFGKSGKIEQCLELFRDMCSKGCAP 789
Query: 415 GARVWEALL 423
+ L+
Sbjct: 790 NFITYRVLI 798
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 139/306 (45%), Gaps = 11/306 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ NRV A E+L+ M+ G + ++ C+ L + + +M + G+
Sbjct: 628 KANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV--FTKMSERGYSPN 685
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y++ I L K ++ L +L++M + P++V YT +++G+ +A +L
Sbjct: 686 LYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLML 745
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G P+V TY I+G K +E +++ M G P+ ITY L+ C
Sbjct: 746 KMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNG 805
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L+ +L+ EMK ++ ++ +I+G + + I + GLL+E S++
Sbjct: 806 LLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSENESVPVDSLYR 863
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
I + G + AL+LL++++ SP V L +S+ + N S VD+ L
Sbjct: 864 ILIDNYIKAGRLEVALDLLEEISS---SPSHAVSNKYLYASLIE----NLSHASKVDKAL 916
Query: 446 NTPCKM 451
M
Sbjct: 917 ELYASM 922
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 10/226 (4%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
AL L ++K G KP Y ++ + + A + E+L V D YT + +
Sbjct: 195 ALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAY 254
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
LCK +I E+ PD + YN ++ LC+ +++ M+ +
Sbjct: 255 SLCKGGKCREAFDLIDEAEDF--VPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIP 312
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ TY I++ G KG + +L + +G +F+ I C+ A +L
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLF 372
Query: 405 KQMADKDVSPGARVWEALLLSSVSK--------LDFVNTSFIRLVD 442
K+M PG V+ + S S LD V ++ ++D
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLD 418
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + C+ ++ + +++ G KP TYN L+Q + +L+ + +EM
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
V++ T S L G EA L++EA + + ++ + GLC+ L +
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEE 297
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSK 429
A+++L +M P + LL + K
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRK 327
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 30/306 (9%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ----EMKKLGFCFGMV 207
+A ++L M+ G ++++ S+C +D + +LL + EM G +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ ++ R L K A ++ +M G PD Y+ VLN + A LF+E+
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GLV DVYTY + ++ CK +E K M E+G P+V+TY L+ A K +++
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK------------ 375
+ EL + M +G + N+ TYS +IDG G + +AC + E
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 376 --------GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
+ T ++ D G C+ V +A +LL M+ + P V++AL+ L
Sbjct: 630 YDDNSERPNVVTYGALLD----GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 426 SVSKLD 431
V KLD
Sbjct: 686 KVGKLD 691
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 6/248 (2%)
Query: 163 DGFCVDG---KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
DG C G K C I +C +D+ ++ + ++ +V Y ++ K
Sbjct: 596 DGHCKAGQVEKACQ-IFERMCGSKDVPDVDM--YFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A +L+ M +G +P+ + Y +++G+ +A+E+ E+ G +YTY
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+ K + K+++ M E P+V+ Y ++ LCKV + + +L++ M+
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG N+ TY+ MIDG G I LLE +KG+ + I C+ G +
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Query: 400 ALELLKQM 407
A LL++M
Sbjct: 833 AHNLLEEM 840
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K+ +A + +M G + Y+ +++ + A ++ ++L
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
P+V Y I+GLCK + K++ MEE G +P+V+TY ++ + ++
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL++ M KG+ N TY ++ID G + A LLEE T ++ + + I
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + + ++L LL ++ D +P V+ L+
Sbjct: 857 EGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLI 889
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%)
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
Q + +P++V Y +L+G +A +L D + + G P+ Y+ I+GLCK
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
++ ++ M E G + TY++L+ KV+ + +++ +M N+
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ MIDGL G EA L++ KG + I G G + LELL++M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 409 DKDVSPGARVWEALL 423
K V+P + L+
Sbjct: 807 SKGVAPNYVTYRVLI 821
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 95/207 (45%), Gaps = 6/207 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I L + +A+ LN+M++ P++V Y+ +L G + ++ + + + +
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+++ G P +N ++ C + K++ M + G P + YN L+ ++C ++
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 327 ------LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L+ + EM G+VLN S L S G +A ++ E + +G
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 381 SSMFDETICGLCQRGLVRKALELLKQM 407
+S + + + LC + A L ++M
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEM 509
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 3/219 (1%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
AL L ++K +P Y ++ + + A + E+ + L D +T +
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
LCK + ++ E PD + Y L+ LC+ + + M+ +
Sbjct: 279 SLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ TYS ++ G +K + +L + +G +F+ + C G A +LL
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 405 KQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQ 443
K+M PG V+ L+ S D +N + L ++
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 133/343 (38%), Gaps = 31/343 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + S+ CEP Y +I L + + + V + + F + + LI Y
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH-GFPATLYTYSSLIDRY 719
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R QD + + K N + I MI DG C GKT
Sbjct: 720 FKVKR-QDLASKV--LSKMLENSCAPNVVIYTEMI-DGLCKVGKT--------------- 760
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE +Q M++ G +V YT +I K+ L +L +M S G+ P+ V Y +
Sbjct: 761 -DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ A L +E+ Y I G K+ I+ + ++E+G
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF-----IESLGLLDEIG 874
Query: 307 ---SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL--NLQTYSIMIDGLASKGD 361
+ P + Y L+ L K + L L++E+ L TY+ +I+ L
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ A L E KG+ + F I GL + + +AL LL
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 144/304 (47%), Gaps = 11/304 (3%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + A ++L M++ G D T ++++ C+ + +E + +M K GF +
Sbjct: 476 NNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKM--EEAIQLRDDMIKRGFKPDLF 533
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ +R+ KV D L +L+QMKS+G+KPDIV Y +++G +D KA + EL
Sbjct: 534 TFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIEL 593
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ GL P+ YN I G + ++ I ++ M+ G +P ITYN+L+ +C +
Sbjct: 594 IKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLV 653
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+E+ + K I L + Y+I+I G G I EA +E + + +
Sbjct: 654 EEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTL 713
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
+ C+ G +A +L +M + P + L+S ++D +D+I+ +
Sbjct: 714 MYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNT-LISGCCEVDS--------LDKIVES 764
Query: 448 PCKM 451
P +M
Sbjct: 765 PAEM 768
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 105/215 (48%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G + +I L + + +A +L M G++ D + Y +++ +A
Sbjct: 457 GLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEA 516
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+L D+++ G PD++T+N ++ C VE + ++ M+ G KPD++TY T++
Sbjct: 517 IQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDG 576
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
CK +++++ + + E+ G+ N Y+ +I G G I +A G+L+ + G+
Sbjct: 577 YCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPT 636
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
++ + +C GLV +A E+ Q K++ G
Sbjct: 637 PITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELG 671
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 164/367 (44%), Gaps = 27/367 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFE-TP-EFIFIDLIKTYADAHRFQDS 135
P + +I LA +F ++ +VL ++ E F TP E I+ LI + ++
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVL---QEMEGFGITPNEVIYNQLIGWHCREGHCSEA 340
Query: 136 VNLF--------------YKIPKFRINRVG---FAIEILNCMINDGFCVDGKTCSLILSS 178
+ LF Y + + + G A +IL+ M+ G V CSL S
Sbjct: 341 LRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVH---CSLFNSV 397
Query: 179 VCEQRDLSS--DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
V + D +L ++EM T I+ L K+ K +A I + G
Sbjct: 398 VAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG 457
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ +I +++G+ + +A ++ ++ G+ D TYN+ I CK + +E I
Sbjct: 458 LGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAI 517
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ M + G KPD+ T+NT L+A C + ++ + L+ +MK +G+ ++ TY +IDG
Sbjct: 518 QLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGY 577
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
D+ +A L E + GL + +++ I G + G + A+ +L M + P
Sbjct: 578 CKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTP 637
Query: 417 RVWEALL 423
+ +L+
Sbjct: 638 ITYNSLM 644
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV-PDVYTYNVYINGLCKQ 289
++ + G P I +++ + A ++F E+ V PDVYTY V I LC+
Sbjct: 170 ELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRA 229
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
++A M+A +E G +P V+TYN L+ ALC+ + +L M + ++ T+
Sbjct: 230 GEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTF 289
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
I+I+GLA E +L+E G+ ++++ I C+ G +AL L +M
Sbjct: 290 GILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVS 349
Query: 410 KDV 412
K +
Sbjct: 350 KGI 352
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 131/290 (45%), Gaps = 40/290 (13%)
Query: 161 INDGFCV--DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
+ DG V D T ++++ ++C ++ D + E+++ G +V Y ++ +L +
Sbjct: 206 MRDGNAVAPDVYTYTVMIKALCRAGEI--DAAFVMLAELERSGIQPTVVTYNVLMDALCR 263
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+V +A + +M ++P IV + +++NG+ + + + + + E+ G+ P+
Sbjct: 264 SGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVI 323
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I C++ + +++ M G K V+TYN + +ALCK E+ +++ EM
Sbjct: 324 YNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEML 383
Query: 339 WKGIVLNLQTY-SIMIDGLASKG---------------------DIIEAC-------GLL 369
G+ ++ + S++ L G ++ AC G
Sbjct: 384 LAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKH 443
Query: 370 EEA-------LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
EEA L KGL + + I GLCQ +++A ++LK M D V
Sbjct: 444 EEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGV 493
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +I++L + ++ A +L +++ GI+P +V Y ++++ + +A +L ++
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L P + T+ + INGL + ++ ME G P+ + YN L+ C+ +
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L EM KGI + TY+++ L +G++ A +L+E L G+ S+F+ +
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398
Query: 389 C-GLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
L G + L L+++M + + P V A
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTA 432
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITYNTLL 318
A + F EL G P + T N+ + L ++ K+ M + + PDV TY ++
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMI 223
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
+ALC+ E++ ++ E++ GI + TY++++D L G + EA L + L
Sbjct: 224 KALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLR 283
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F I GL + + +L++M ++P ++ L+
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLI 328
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
G EIL M N+G T ++++ S+ RD+S E L EMK + YT
Sbjct: 229 GRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEAL--FNEMKANNVVGDVYLYT 286
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
VI + + + A +L++ +G++P+ Y +++NG AE L ++
Sbjct: 287 AVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQ 346
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ + +N I+G C++ V+ +K+ A ME++G + D+ TYNTL LC+V L+
Sbjct: 347 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEA 406
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ L+ M G+V N TY+ +I GD++EA L E KG ++ I G
Sbjct: 407 KTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDG 466
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++G +R+A K+M K P + +L+
Sbjct: 467 YTKKGSIREAERFRKEMEKKGFVPDVYTYASLV 499
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 138/302 (45%), Gaps = 13/302 (4%)
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
D + + +N + + R A ++L+ + +G + +T ++++ C+ +
Sbjct: 280 GDVYLYTAVINAYCRAGNMR-----RAAKVLDECVGNGVEPNERTYGVLINGFCKIGQME 334
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ E+L + +M+ G + + +I +K V DAL I M+ G++ DI Y
Sbjct: 335 AAEML--LADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNT 392
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ G+ +A+ L ++ +G+VP+ TY I+ CK ++ ++ M E G
Sbjct: 393 LACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 452
Query: 307 SKPDVITYNTLLQALCK---VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ P V+TYN ++ K +RE R R KEM+ KG V ++ TY+ ++ G G +
Sbjct: 453 ATPSVVTYNVMIDGYTKKGSIREAERFR---KEMEKKGFVPDVYTYASLVHGHCVNGKVD 509
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A L EE +G + I GL + G A +L M + P ++ AL+
Sbjct: 510 VALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569
Query: 424 LS 425
S
Sbjct: 570 GS 571
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 17/242 (7%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
VG I N MI DG+C G D+ L M+K+G + Y
Sbjct: 348 VGLNQIIFNTMI-DGYCRKGMV----------------DDALKIKAAMEKMGVELDIYTY 390
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ L + ++ +A +L+ M G+ P+ V YT +++ D V+A LF E+
Sbjct: 391 NTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAE 450
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G P V TYNV I+G K+ ++ + ME+ G PDV TY +L+ C +++
Sbjct: 451 KGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDV 510
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+L +EMK +G N+ Y+ +I GLA +G A L ++ L GL S++ +
Sbjct: 511 ALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVG 570
Query: 390 GL 391
L
Sbjct: 571 SL 572
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 120/253 (47%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
S+++ +C+ + D+ + +M + G + Y +++ V+++ IL
Sbjct: 179 AASVVVDGLCKSGRV--DDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILE 236
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M+++GI+ + YT++++ + D K E LF+E+ +V DVY Y IN C+
Sbjct: 237 IMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAG 296
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N+ K++ G +P+ TY L+ CK+ ++ L+ +M+ +G+ LN ++
Sbjct: 297 NMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFN 356
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
MIDG KG + +A + G+ ++ CGLC+ + +A LL M +
Sbjct: 357 TMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEM 416
Query: 411 DVSPGARVWEALL 423
V P + L+
Sbjct: 417 GVVPNYVTYTTLI 429
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F +EM+K GF + Y +++ KV AL + +MK G +P++V YT +++G+
Sbjct: 479 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 538
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ A +L+D++L GL+PD Y+ + L N
Sbjct: 539 KEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDN 576
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 150/308 (48%), Gaps = 4/308 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I + A E+L M+ G+ + T + ++ +C ++ + F++ ++ +
Sbjct: 310 KIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLC-KKGWTEKAFRLFLKLVRSDNYKPN 368
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ YT +I K+EK+ A +L +MK G+ P+ YT +++G ++ +A EL D
Sbjct: 369 VYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMD 428
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G P+++TYN I+GLCK+ K++ + G D +TY L+ C+
Sbjct: 429 LMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQT 488
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + + M G+ ++ TY+++I + + E+ L EEA+ GL +
Sbjct: 489 DNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYT 548
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
ICG C+ G + A++ +M D P + + AL+ L + SKLD + ++D
Sbjct: 549 SMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDN 608
Query: 444 ILNTPCKM 451
L +PC++
Sbjct: 609 GL-SPCEV 615
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 38/262 (14%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ R+ L MI G+ VD TC+L++S+ E+ GFV
Sbjct: 240 RMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEK---------GFVNR--------- 281
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
A + G+ P+++ ++ ++NG+ +A E+ +
Sbjct: 282 -------------------AFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLE 322
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM-IACMEELGSKPDVITYNTLLQALCKV 324
E++ G P+VYT+ I+GLCK+ E ++ + + KP+V TY ++ CK
Sbjct: 323 EMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKE 382
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+LNR L+ MK +G+V N TY+ +IDG G+ A L++ +G +
Sbjct: 383 EKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTY 442
Query: 385 DETICGLCQRGLVRKALELLKQ 406
+ I GLC++G +A +LL++
Sbjct: 443 NAIIDGLCKKGRFPEAYKLLRR 464
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 4/202 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGI--KPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++RS + K+ +A+ ++ +M++ G+ K I+ + + + + DY AE++FDE+L
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDY--AEKVFDEMLD 221
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+VPD +Y + + G C+ + + + M E G D T ++ + +NR
Sbjct: 222 RAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNR 281
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
K+ G+ NL +S +I+GL G I +A +LEE + KG I
Sbjct: 282 AFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALID 341
Query: 390 GLCQRGLVRKALELLKQMADKD 411
GLC++G KA L ++ D
Sbjct: 342 GLCKKGWTEKAFRLFLKLVRSD 363
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 5/225 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L + G D T ++++S C Q D + + L M K+G M Y +
Sbjct: 458 AYKLLRRGLKSGLHADKVTYTILISEFCRQTD--NKQALAIFSRMFKVGLQPDMHTYNVL 515
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + +++KV ++ + + G+ P YT ++ G A + F ++ G
Sbjct: 516 IATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGC 575
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY I+GLC ++ ++ ++ M + G P +T TL CK +
Sbjct: 576 KPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMI 635
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+++ ++ K L ++T + +I L S+ + A + L+K L
Sbjct: 636 ILERLEKK---LWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDL 677
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 2/290 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + + A ++ M+++GF + T ++++ ++ D+ + MK
Sbjct: 414 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDI--ENAFSIFHRMKDANILPT 471
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+I+ L K + F+ + N+ S G P + Y +++G I + + A ++
Sbjct: 472 DTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYR 531
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +G+ P TY I+G CK NN++ +K++ M+ G K D+ Y TL+ CK R
Sbjct: 532 EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRR 591
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ EL+ E++ G+ N Y+ MI G + ++ EA L ++ +N+G+ +
Sbjct: 592 DMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYT 651
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
I GL + G + A ++ +M K + P R L+ +K F N
Sbjct: 652 SLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 701
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 116/229 (50%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM ++G V YT++I K + AL +LN MK G+K DI Y +++G +
Sbjct: 531 REMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKR 590
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
D A EL +EL GL P+ + YN I G NNVE I + M G D+ TY
Sbjct: 591 RDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTY 650
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+L+ L K L ++ EM KGI+ + + ++++I+GL +KG A +LE+
Sbjct: 651 TSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNG 710
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
K + +++ I G + G +++A L +M D+ + P ++ L+
Sbjct: 711 KNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 759
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+S L ++EM+ G+ +T+VI + VK+ V +AL + + M + G ++ T
Sbjct: 208 NSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVAT 267
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G +Q + A L +E+ GLVP+ TY+V I+G CK N+E + + M+
Sbjct: 268 SLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTK 327
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G + V + N++L+ K + + + G+ N+ T++ ++ L +G + EA
Sbjct: 328 GIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEA 386
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C L +E + KG+ ++ I G C++ + A ++ K+M D +P A + L+
Sbjct: 387 CNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDG 446
Query: 426 SVSKLDFVN--TSFIRLVD 442
K D N + F R+ D
Sbjct: 447 YFKKGDIENAFSIFHRMKD 465
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + +LS +C++ + +E E+ G +V Y N+I +K+ + A +
Sbjct: 369 TFNTLLSWLCKEGKM--NEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 426
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M +G P+ V +T++++G + D A +F + ++P T + I GLCK
Sbjct: 427 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 486
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
G + G P + YNT++ K +N + +EM GI + TY+
Sbjct: 487 RSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYT 546
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+IDG +I A LL + KGL + I G C+R ++ A ELL ++
Sbjct: 547 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 606
Query: 411 DVSPGARVWEALL 423
+SP ++ +++
Sbjct: 607 GLSPNRFIYNSMI 619
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++N + G + T S+++ C+ ++ ++ F EMK G + ++
Sbjct: 282 ALVLVNEISESGLVPNKVTYSVLIDGCCKNGNI--EKAFEFYSEMKTKGIRSSVYSLNSI 339
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +K + +A + N G+ ++ + +L+ + + +A L+DE++ G+
Sbjct: 340 LEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 398
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V +YN I G C+++N+ A K+ M + G P+ +T+ L+ K ++
Sbjct: 399 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 458
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ MK I+ T I+I GL G E L + +++G ++ I G
Sbjct: 459 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 518
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + A + ++M + ++P + +L+
Sbjct: 519 KEGNINLASNVYREMCEVGITPSTVTYTSLI 549
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++ C+ ++ D L + +MK+ G + Y +I K+ + A +LN
Sbjct: 544 TYTSLIDGFCKGNNI--DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 601
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+++ G+ P+ Y ++ G + +A +L+ +++ G+ D+ TY I+GL K
Sbjct: 602 ELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSG 661
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + M G PD + L+ LC + R+++++M K ++ ++ Y+
Sbjct: 662 RLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYN 721
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+I G +G++ EA L +E L++GL + +D + G
Sbjct: 722 TLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-------------------- 187
N + A+++LN M G +D K ++ C++RD+ S
Sbjct: 556 NNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIY 615
Query: 188 -------------DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+E + ++M G + YT++I L+K ++ A I +M S
Sbjct: 616 NSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 675
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
GI PD +T+++NG+ + + A ++ +++ ++P V YN I G K+ N++
Sbjct: 676 KGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQE 735
Query: 295 GIKMIACMEELGSKPDVITYNTLLQA 320
++ M + G PD ITY+ L+
Sbjct: 736 AFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 35/240 (14%)
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
Q K+ G++ D Y++ ++ + ++ + A L E+ G +P T+ I K+
Sbjct: 183 QAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEG 242
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
NV +++ M G ++ +L++ C L LV E+ G+V N TYS
Sbjct: 243 NVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYS 302
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCT---------------QS-----SMFDET--- 387
++IDG G+I +A E KG+ + QS +MF++
Sbjct: 303 VLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALES 362
Query: 388 -----------ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
+ LC+ G + +A L ++ K +SP + ++L K D +N +
Sbjct: 363 GLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRK-DNINAA 421
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%)
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
I + + ++AE+ F + G+ D Y+++++ LC + N + ++ M G P
Sbjct: 169 IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPE 228
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
T+ +++ A K + L +M G +NL + ++ G +G++ A L+ E
Sbjct: 229 GTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 288
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + I G C+ G + KA E +M K + ++L
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL 340
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 153/311 (49%), Gaps = 11/311 (3%)
Query: 99 ISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE--- 155
+++ +D + K + E IF D IK Y F V Y I + + G A E
Sbjct: 27 LNTYMDCVFKAGDVEKGRAIFED-IKGYG----FLPDVRS-YSILIHGLTKAGQARETSS 80
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
I + M GF +D + + ++ C+ + D+ ++EMK + Y ++I
Sbjct: 81 IFHAMKQRGFALDARAYNAVVDGFCKSGKV--DKAYEALEEMKVKHVPPTVATYGSIIDG 138
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K +++ +A + + KS GI+ +++ Y+ +++G +A + +E++ GL P+
Sbjct: 139 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPN 198
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
VYT+N ++ L K + + M+E+ P+ TY+ L+ LC+V++ N+ +
Sbjct: 199 VYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 258
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM+ +G+V N+ TY+ MI GLA G+I +AC L E G ++ F+ I G+
Sbjct: 259 EMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHAN 318
Query: 396 LVRKALELLKQ 406
+A + ++
Sbjct: 319 RAIEAYHVFEE 329
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 1/215 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
D I +M G +PD+ ++ V D K +F+++ G +PDV +Y++ I
Sbjct: 7 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 66
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+GL K + M++ G D YN ++ CK ++++ E ++EMK K +
Sbjct: 67 HGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVP 126
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ TY +IDGLA + EA L EEA +KG+ ++ I G + G + +A +
Sbjct: 127 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 186
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
L++M K ++P W + L+ ++ K + +N + I
Sbjct: 187 LEEMMKKGLAPNVYTWNS-LMDALVKAEEINEALI 220
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
I +K G PD+ Y+++++G+ + +F + G D YN ++G
Sbjct: 45 AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGF 104
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK V+ + + M+ P V TY +++ L K+ L+ L +E K KGI LN+
Sbjct: 105 CKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNV 164
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
YS +IDG G I EA +LEE + KGL ++ + L + + +AL +
Sbjct: 165 IVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQS 224
Query: 407 MADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
M + SP + ++L++ + ++ N +F+
Sbjct: 225 MKEMKCSPNTYTY-SILINGLCRVQKYNKAFV 255
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 8/263 (3%)
Query: 164 GFCVDGKTCSLI---LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
GF D ++ S++ L+ + R+ SS MK+ GF Y V+ K
Sbjct: 54 GFLPDVRSYSILIHGLTKAGQARETSS-----IFHAMKQRGFALDARAYNAVVDGFCKSG 108
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
KV A L +MK + P + Y +++G+ + +A LF+E G+ +V Y+
Sbjct: 109 KVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYS 168
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
I+G K ++ ++ M + G P+V T+N+L+ AL K E+N + MK
Sbjct: 169 SLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEM 228
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
N TYSI+I+GL +A +E +GL + I GL + G + A
Sbjct: 229 KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDA 288
Query: 401 LELLKQMADKDVSPGARVWEALL 423
L ++ P A + AL+
Sbjct: 289 CSLFERFKANGGIPDAASFNALI 311
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 31/278 (11%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEI--LNCMINDGFCVDGK--------- 170
LI A + +++ ++F+ + + GFA++ N ++ DGFC GK
Sbjct: 65 LIHGLTKAGQARETSSIFHAMKQ-----RGFALDARAYNAVV-DGFCKSGKVDKAYEALE 118
Query: 171 ------------TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
T I+ + + L DE +E K G ++ Y+++I K
Sbjct: 119 EMKVKHVPPTVATYGSIIDGLAKIDRL--DEAYMLFEEAKSKGIELNVIVYSSLIDGFGK 176
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
++ +A IL +M G+ P++ + +++ ++ E+ +A F + + P+ YT
Sbjct: 177 VGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYT 236
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y++ INGLC+ M++ G P+V+TY T++ L KV + L + K
Sbjct: 237 YSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFK 296
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
G + + +++ +I+G++ IEA + EE +G
Sbjct: 297 ANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRG 334
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++EM K G + + +++ +LVK E++ +AL MK P+ Y+++
Sbjct: 181 DEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSIL 240
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ + Y KA + E+ GLVP+V TY I+GL K N+ + + G
Sbjct: 241 INGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGG 300
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD ++N L++ + + +E + +G +N++ ++D L +K + IE
Sbjct: 301 IPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDAL-NKAECIEQAA 359
Query: 368 LLEEALNK 375
++ L +
Sbjct: 360 VVGAVLRE 367
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S++++ +C R ++ F QEM+K G +V YT +I L K + DA +
Sbjct: 236 TYSILINGLC--RVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFE 293
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ K++G PD + ++ G+ ++A +F+E + G +V ++ L K
Sbjct: 294 RFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKAE 353
Query: 291 NVEAGIKMIACMEELG 306
+E + A + E+
Sbjct: 354 CIEQAAVVGAVLREIA 369
>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09900-like [Glycine max]
Length = 603
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 152/303 (50%), Gaps = 12/303 (3%)
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
IK Y D + + ++ + +RVG A+++L M++ + T + ++ +C +
Sbjct: 254 IKCYPDVVTYTELID-----AACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNE 308
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
L DE++ F++ + G+ ++ YT V+ SL + DA+ +L M G ++V
Sbjct: 309 GRL--DEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVV 366
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+ ++N + + KA + + + P+ +YN I G C + + I M
Sbjct: 367 TFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCNEKSXYLEI-----M 421
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G PD++TYN LL ALCK R+++ E++K++ +KG+ ++ TYSI+IDGL G
Sbjct: 422 VSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKT 481
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A LLEEA KGL F + G+ ++G V +A+++ + + P A + +
Sbjct: 482 DLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLI 541
Query: 423 LLS 425
++
Sbjct: 542 IMG 544
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 143/312 (45%), Gaps = 24/312 (7%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C+P Y+ +IK + + ++ L ++ ++ + ++ + + R+ D+
Sbjct: 291 CKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSY-GYQPDVISYTIVLHSLSSGGRWTDA 349
Query: 136 VNLFYKI--PKFRINRVGFAIEILNCMINDGFCVDG-KTCSLILSSVCEQRDLSSDELLG 192
+ L + +N V F ++N + G +I VC +S + +G
Sbjct: 350 MKLLASMLCKGCSLNVVTFN-TLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIG 408
Query: 193 --------FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+++ M G +V Y ++ +L K KV DA+ IL Q+ G+KPD++ Y
Sbjct: 409 GFCNEKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITY 468
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++++G++ A EL +E GL P++ T+ + G+ ++ V IK+ +E
Sbjct: 469 SIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEG 528
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
LG +P+ YN ++ LCK ++ +R G TY+I++ G+ S+G E
Sbjct: 529 LGIRPNAFAYNLIIMGLCKTQQTSR-----------GCKPTEATYNILVKGITSEGXPKE 577
Query: 365 ACGLLEEALNKG 376
A L E +KG
Sbjct: 578 ASKLWSELYSKG 589
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 121/254 (47%), Gaps = 12/254 (4%)
Query: 171 TCSLILSSVCE-QRDLSSDELLGFVQEMKKL------GFCFGMVDYTNV-IRSLVKKEKV 222
C+ ++S C+ R ++ ++G ++E + F F + NV I +V
Sbjct: 151 ACTALISEFCKIGRTKNATRIMGILEESGAVIDITIYNF-FCLPKKNNVLIGGYCXSGEV 209
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+AL +L+ M + P+ + Y +L + + + E+ D L + PDV TY
Sbjct: 210 EEALRVLDCMS---VSPNGINYDTILRSLCDRCKLKQGMEVLDRQLQIKCYPDVVTYTEL 266
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+ CK + V +K++ M KP+V+TYN L++ +C L+ + +K + G
Sbjct: 267 IDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGY 326
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
++ +Y+I++ L+S G +A LL L KG F+ I LCQ+GL+ KA
Sbjct: 327 QPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFN 386
Query: 403 LLKQMADKDVSPGA 416
+L+ + +P +
Sbjct: 387 VLEMIXKHVCTPNS 400
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 169/390 (43%), Gaps = 58/390 (14%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
E +H + L +N + + S L+++ + N LI + R +++ +
Sbjct: 116 EIHH--LHVLIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIM- 172
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
+ G I+I I + FC+ K ++++ C G V+E ++
Sbjct: 173 ----GILEESGAVIDI---TIYNFFCLPKKN-NVLIGGYCXS---------GEVEEALRV 215
Query: 201 GFCFGM----VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
C + ++Y ++RSL + K+ + +L++ PD+V YT +++
Sbjct: 216 LDCMSVSPNGINYDTILRSLCDRCKLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSR 275
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A +L E++ P+V TYN I G+C + ++ I+ + + G +PDVI+Y
Sbjct: 276 VGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTI 335
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+L +L +L+ M KG LN+ T++ +I+ L KG + +A +L E + K
Sbjct: 336 VLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVL-EMIXKH 394
Query: 377 LCTQSSM-FDETICGLCQ-----------RGL-------------------VRKALELLK 405
+CT +S+ ++ +I G C RG V A+E+LK
Sbjct: 395 VCTPNSISYNPSIGGFCNEKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILK 454
Query: 406 QMADKDVSPGARVWEALL--LSSVSKLDFV 433
Q++ K + P + ++ L V K D
Sbjct: 455 QLSFKGLKPDVITYSIIIDGLLKVGKTDLA 484
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 157 LNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
L M++ G D T +++L+++C+ R + D+ + ++++ G ++ Y+ +I L
Sbjct: 418 LEIMVSRGCYPDIVTYNILLAALCKDRKV--DDAVEILKQLSFKGLKPDVITYSIIIDGL 475
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
+K K AL +L + + G+KP+++ +T V+ G+ + +A ++F L LG+ P+
Sbjct: 476 LKVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNA 535
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
+ YN+ I GLCK G KP TYN L++ + +L E
Sbjct: 536 FAYNLIIMGLCKTQQTSRG-----------CKPTEATYNILVKGITSEGXPKEASKLWSE 584
Query: 337 MKWKGIV 343
+ KG V
Sbjct: 585 LYSKGPV 591
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 4/292 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++ L M G D C+++L+ +C+ R + D+ + EM +G +V Y V
Sbjct: 4 ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKI--DKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L +K+ +A N M +G +PD++ +T +++G L ++ L
Sbjct: 62 ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-F 120
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV+ Y I+G CK +++ G K++ M G PD Y L+ LCK+ ++ E
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L + M+ G + + T+ +I+ L++ G + EAC L E + +G + D I LC
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ G V +A E+ + + K V+ +RV L+ KL V+ L+ +
Sbjct: 241 KAGKVDEANEIYQTVVAKKVAT-SRVAYNSLMDGYCKLGRVDDGLKLLLQMV 291
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 153/373 (41%), Gaps = 32/373 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L S Y C+P Y +I+ L + + + + D ++ T +IK
Sbjct: 321 LFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTT-------VIKGL 373
Query: 127 ADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
AD+ R ++ LF K+ N V + I DG G+
Sbjct: 374 ADSKRIDEACELFEKLKTAGCSPNVVAYTAVI------DGLLKAGRI------------- 414
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
D L F ++M YT VI L K + + DA + QM G PD + Y
Sbjct: 415 --EDGLKNF-EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 471
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
T +++G +A +L D +L G P TY ++G CK + + ++IA M E
Sbjct: 472 TTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 531
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G +P + + +LL +++ EM +G ++ Y+ +ID L S G + E
Sbjct: 532 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 591
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A + + + KG + + I + G V A E+L+ MA V P + +L+
Sbjct: 592 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 651
Query: 425 SSVSKLDFVNTSF 437
V KL+ V+ +F
Sbjct: 652 GYV-KLERVDQAF 663
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 159/386 (41%), Gaps = 59/386 (15%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQ 133
+C P Y VI L + D V + + ++ P+ I + LI ++ A +
Sbjct: 428 SCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGC--VPDTITYTTLIDGFSKASKMD 485
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+ A ++L+ M+ G T I+ C+ + +E
Sbjct: 486 E------------------ARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMI--NEAKEV 525
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ +M++ G G+ +T+++ + K + +A +L +M + G PD++ YT +++ +
Sbjct: 526 IAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 585
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+A +FD ++ G PD TY I K NVEA +++ M + G PD
Sbjct: 586 TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFA 645
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLN---------------------------- 345
YN+L+ K+ +++ + M GI N
Sbjct: 646 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML 705
Query: 346 --------LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
L +Y+I+IDGL G + EA +E +++G+ + + I L + G +
Sbjct: 706 EKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRI 765
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
+A +L++ M V+P + + AL+
Sbjct: 766 PEAKKLVEDMVKLGVNPDVQAYSALI 791
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 138/319 (43%), Gaps = 23/319 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y ++ + + V+ + +R E FIF L+ Y R +++
Sbjct: 500 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER-GCEPGLFIFTSLLSYYLSKGRAEEAY 558
Query: 137 NLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
+ ++ F RV A + + MI G D T I+ +
Sbjct: 559 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 618
Query: 180 CEQRDLSSDELLGFVQE-MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+ + + E G + E M K G Y +++ VK E+V A G+ ++M + GIK
Sbjct: 619 SK---IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIK 675
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP-DVYTYNVYINGLCKQNNVEAGIK 297
P+ V + ++++G+ +A LF E+L VP + +Y + I+GL K V
Sbjct: 676 PNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFS 735
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M + G P+ TY +L+ +L K + ++LV++M G+ ++Q YS +I GL
Sbjct: 736 QFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLI 795
Query: 358 SKGDIIEACGLLEEALNKG 376
+ A + +E + +G
Sbjct: 796 DSSMVDTAWDVFQEMMKRG 814
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+AL L +M + G+ PD+V +VLNG+ KA ELF E+ +G P + +YN I
Sbjct: 3 EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+GL + ++ K M + G +PDVI + TL+ CK + ++ ++ K
Sbjct: 63 SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRFR 121
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ Y+ +I G GD+ +LEE L G ++ + I LC+ G V +A EL
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181
Query: 404 LKQM 407
++M
Sbjct: 182 FERM 185
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I++ K V A IL M G+ PD Y +++G + E +A ++D ++
Sbjct: 611 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 670
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-EELGSKPDVITYNTLLQALCKVREL 327
G+ P+ T+NV ++GL K + + M E+ P +++Y L+ L K +
Sbjct: 671 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRV 730
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ +EM +GI+ TY+ +I LA G I EA L+E+ + G+ +
Sbjct: 731 SEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 790
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
I GL +V A ++ ++M + +P ++ L
Sbjct: 791 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 301 CMEEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
C++E+ G PDV+ N +L LCK R++++ EL EM G + +Y+ +I GLA
Sbjct: 7 CLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLA 66
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
S + EA ++ G F I G C+ G + LL Q A K P
Sbjct: 67 SIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALKRFRPDVF 125
Query: 418 VWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
++ +++ D ++T F ++++++L C
Sbjct: 126 LYTSVIHGYCKAGD-LDTGF-KILEEMLAAGC 155
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 30/306 (9%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ----EMKKLGFCFGMV 207
+A ++L M+ G ++++ S+C +D + +LL + EM G +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ ++ R L K A ++ +M G PD Y+ VLN + A LF+E+
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GLV DVYTY + ++ CK +E K M E+G P+V+TY L+ A K +++
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK------------ 375
+ EL + M +G + N+ TYS +IDG G + +AC + E
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 376 --------GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
+ T ++ D G C+ V +A +LL M+ + P V++AL+ L
Sbjct: 630 YDDNSERPNVVTYGALLD----GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 426 SVSKLD 431
V KLD
Sbjct: 686 KVGKLD 691
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 6/248 (2%)
Query: 163 DGFCVDG---KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
DG C G K C I +C +D+ ++ + ++ +V Y ++ K
Sbjct: 596 DGHCKAGQVEKACQ-IFERMCGSKDVPDVDM--YFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A +L+ M +G +P+ + Y +++G+ +A+E+ E+ G +YTY
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+ K + K+++ M E P+V+ Y ++ LCKV + + +L++ M+
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG N+ TY+ MIDG G I LLE +KG+ + I C+ G +
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Query: 400 ALELLKQM 407
A LL++M
Sbjct: 833 AHNLLEEM 840
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K+ +A + +M G + Y+ +++ + A ++ ++L
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
P+V Y I+GLCK + K++ MEE G +P+V+TY ++ + ++
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL++ M KG+ N TY ++ID G + A LLEE T ++ + + I
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + + ++L LL ++ D +P V+ L+
Sbjct: 857 EGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLI 889
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%)
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
Q + +P++V Y +L+G +A +L D + + G P+ Y+ I+GLCK
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
++ ++ M E G + TY++L+ KV+ + +++ +M N+
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ MIDGL G EA L++ KG + I G G + LELL++M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 409 DKDVSPGARVWEALL 423
K V+P + L+
Sbjct: 807 SKGVAPNYVTYRVLI 821
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 95/207 (45%), Gaps = 6/207 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I L + +A+ LN+M++ P++V Y+ +L G + ++ + + + +
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+++ G P +N ++ C + K++ M + G P + YN L+ ++C ++
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 327 ------LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L+ + EM G+VLN S L S G +A ++ E + +G
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 381 SSMFDETICGLCQRGLVRKALELLKQM 407
+S + + + LC + A L ++M
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEM 509
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 133/343 (38%), Gaps = 31/343 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + S+ CEP Y +I L + + + V + + F + + LI Y
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH-GFPATLYTYSSLIDRY 719
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R QD + + K N + I MI DG C GKT
Sbjct: 720 FKVKR-QDLASKV--LSKMLENSCAPNVVIYTEMI-DGLCKVGKT--------------- 760
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE +Q M++ G +V YT +I K+ L +L +M S G+ P+ V Y +
Sbjct: 761 -DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ A L +E+ Y I G K+ I+ + ++E+G
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF-----IESLGLLDEIG 874
Query: 307 ---SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL--NLQTYSIMIDGLASKGD 361
+ P + Y L+ L K + L L++E+ L TY+ +I+ L
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ A L E KG+ + F I GL + + +AL LL
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 3/219 (1%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
AL L ++K +P Y ++ + + A + E+ + L D +T +
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
LCK + ++ E PD + Y L+ LC+ + + M+ +
Sbjct: 279 SLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ TYS ++ G +K + +L + +G +F+ + C G A +LL
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 405 KQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQ 443
K+M PG V+ L+ S D +N + L ++
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 160/373 (42%), Gaps = 38/373 (10%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHI------------------EKRENFETPEFIFIDL 122
E + V+ TL +N +F S+L + RE TP +F L
Sbjct: 116 ETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPR-VFDSL 174
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGF 165
KT+A +F+++ + F ++ + RV A+ M
Sbjct: 175 FKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKI 234
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
+ T ++++S C L D+ + +Q+M++LGF V Y +I +K + A
Sbjct: 235 SPNPYTLNMVMSGYCRSGKL--DKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
L + N M G++P++V + +++G +A ++F E+ + + P+ TYN ING
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+Q + E + M G + D++TYN L+ LCK + + + VKE+ + +V N
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
T+S +I G + + L + + G F+ + C+ A ++L+
Sbjct: 413 SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Query: 406 QMADKDVSPGARV 418
+M + + +R
Sbjct: 473 EMVRRSIPLDSRT 485
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
IL+S+ + + S+ +L ++M G + +I S +V A +L ++
Sbjct: 80 ILTSITKVKRYST--VLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILK 137
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +PD +T ++ G+ ++ +A LFD+++ G PDV Y INGLCK + A
Sbjct: 138 LGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSA 197
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
I+++ ME+ +PDV+ Y TL+ +LCK R+ + L EM KGI N+ T + ++
Sbjct: 198 AIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVY 257
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + G+ LL E ++ + + + LC+ G+V +A +++ M V P
Sbjct: 258 ALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEP 317
Query: 415 GARVWEALL 423
+ AL+
Sbjct: 318 DVVTYTALI 326
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 169/396 (42%), Gaps = 38/396 (9%)
Query: 57 IPKQPHILSSLLHSFSIYN----------------CEPPPEAYHFVIKTLAENSQFCDIS 100
IP + L+ L++SF N C+P ++ +IK L Q +
Sbjct: 105 IPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEAL 164
Query: 101 SVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK---------------- 144
+ D + E F+ I+ LI ++ L + K
Sbjct: 165 HLFDKM-IWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHS 223
Query: 145 -FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
+ + A + + MI G + TC+ ++ ++C + L + EM
Sbjct: 224 LCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTL--LNEMVDSKIM 281
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ T V+ +L K+ V A +++ M G++PD+V YT +++G ++ + +A ++
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
FD ++ G P+V++YN ING CK ++ + + M P+ +TYNTL+ LC
Sbjct: 342 FDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCH 401
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
V L L +EM G + +L TY I++D L + +A LL+ L +
Sbjct: 402 VGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQI 461
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ I G+C+ G + A +L ++ K + P VW
Sbjct: 462 YTIVIDGMCRAGELEDARDLFSNLSSKGLKP--NVW 495
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 133/267 (49%), Gaps = 2/267 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+LN M++ + + + ++ ++C++ ++ V M + G +V YT +I
Sbjct: 271 LLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAH--DVVDMMFQSGVEPDVVTYTALIDG 328
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ ++ +A+ + + M G P++ Y ++NG E KA LF+E+ L+P+
Sbjct: 329 HCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPN 388
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
TYN I+GLC ++ I + M G PD++TY LL LCK L++ L+K
Sbjct: 389 TVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLK 448
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
++ + ++Q Y+I+IDG+ G++ +A L +KGL ++ GLC+RG
Sbjct: 449 AIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRG 508
Query: 396 LVRKALELLKQMADKDVSPGARVWEAL 422
L+ +A +L +M + S + +
Sbjct: 509 LLDEATKLFMEMDENACSADGCTYNTI 535
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 169/380 (44%), Gaps = 23/380 (6%)
Query: 64 LSSLLHSFS-IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI-- 120
L L SF+ + + PPP F K L ++ S+VL K ++F P ++
Sbjct: 55 LDDALSSFNRMLHMHPPPSIVDFA-KILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLN 113
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMIND 163
LI ++ +R + ++ KI K ++G A+ + + MI +
Sbjct: 114 VLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWE 173
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF D + +++ +C+ S+ + ++ M+K +V Y +I SL K +
Sbjct: 174 GFQPDVVIYATLINGLCKTGHTSA--AIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQT 231
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A + ++M + GI P+IV ++ + ++ L +E++ ++P+ + +
Sbjct: 232 QAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVV 291
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ LCK+ V ++ M + G +PDV+TY L+ C E++ ++ M KG
Sbjct: 292 DALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCA 351
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N+ +Y+ +I+G + +A L EE + L + ++ I GLC G ++ A+ L
Sbjct: 352 PNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIAL 411
Query: 404 LKQMADKDVSPGARVWEALL 423
++M P + LL
Sbjct: 412 FREMVACGQIPDLVTYRILL 431
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 121/264 (45%), Gaps = 2/264 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A ++++ M G D T + ++ C + ++ DE + M G + Y
Sbjct: 300 VAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEM--DEAVKVFDMMVHKGCAPNVFSY 357
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I K E++ A+ + +M + P+ V Y +++G+ A LF E++
Sbjct: 358 NTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVA 417
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G +PD+ TY + ++ LCK +++ + ++ +E PD+ Y ++ +C+ EL
Sbjct: 418 CGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELED 477
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
R+L + KG+ N+ TY+IM GL +G + EA L E ++
Sbjct: 478 ARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQ 537
Query: 390 GLCQRGLVRKALELLKQMADKDVS 413
G + +A++LL++M + S
Sbjct: 538 GFLRNNETSRAIQLLEEMLARGFS 561
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 2/215 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I R+ A+ + M + T + ++ +C L + + +EM G
Sbjct: 366 KIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQ--DAIALFREMVACGQIPD 423
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ L K + A+ +L ++ + PDI YT+V++G+ + A +LF
Sbjct: 424 LVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFS 483
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L GL P+V+TYN+ +GLCK+ ++ K+ M+E D TYNT+ Q +
Sbjct: 484 NLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNN 543
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
E +R +L++EM +G ++ T ++++ L+ G
Sbjct: 544 ETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDG 578
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 2/255 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ + M++ G + + + +++ C+ + D+ + +EM + V Y +
Sbjct: 338 AVKVFDMMVHKGCAPNVFSYNTLINGYCKIERM--DKAMYLFEEMCRQKLIPNTVTYNTL 395
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L ++ DA+ + +M + G PD+V Y ++L+ + KA L + L
Sbjct: 396 IHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNL 455
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ Y + I+G+C+ +E + + + G KP+V TYN + LCK L+ +
Sbjct: 456 DPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATK 515
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM + TY+ + G + A LLEE L +G S + L
Sbjct: 516 LFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLS 575
Query: 393 QRGLVRKALELLKQM 407
GL + L+ M
Sbjct: 576 DDGLDQSEAHKLEDM 590
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 115/229 (50%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM G MV + +I +L K+ KV +A +L M GI PD+V Y ++ G +
Sbjct: 249 NEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 308
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
D A ELF + G PDV +YNV ING K VE +K+ M +G +P+VITY
Sbjct: 309 GDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITY 368
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
++LL+ + +++ ++L MK GI N TY I +DGL + EA L E +
Sbjct: 369 DSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKS 428
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + I GLC+ G + A EL ++++++ P + ++
Sbjct: 429 SNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 477
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 133/264 (50%), Gaps = 2/264 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L MI G D T + ++ C DL+S L FV M G ++ Y +
Sbjct: 279 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL-FVS-MPSKGCEPDVISYNVL 336
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K KV +A+ + N+M G +P+++ Y +L G+ + A++LF + G+
Sbjct: 337 INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 396
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ YTY ++++GLCK + + +K+ ++ K ++ N L+ LCK +L E
Sbjct: 397 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 456
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +++ +G N+ TY+IMI G +G + +A L+++ G ++ + G
Sbjct: 457 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFY 516
Query: 393 QRGLVRKALELLKQMADKDVSPGA 416
+ + + ++LL +MA KDVSP A
Sbjct: 517 ESNKLEEVVQLLHRMAQKDVSPDA 540
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 123/295 (41%), Gaps = 51/295 (17%)
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI-- 237
C+ ++++ L F M + + + +++ L K + + NQM+ G+
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 238 ---------------------------------KPDIVCYTMVLNGVIVQEDYVKAEELF 264
P+IV Y ++ G+ ++ +A LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM------EELGSKPDVITYNTLL 318
+ LG PDV TY I GLC N+ +K+ M E+ KP+VITYN ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLN----------LQTYSIMIDGLASKGDIIEACGL 368
LCKV + ++L +EMK +G++ N + T++++ID L +G +IEA L
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + G+ ++ I G C G + A EL M K P + L+
Sbjct: 283 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 337
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 4/269 (1%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
I N M++ G D T ++++ ++C E + + + +LLG + E G +V Y ++I
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES---GIVPDLVTYNSLIE 303
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+ A + M S G +PD++ Y +++NG +A +L++E+L++G P
Sbjct: 304 GFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRP 363
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+V TY+ + G+ V+ K+ + M+ G + TY L LCK L +L
Sbjct: 364 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLF 423
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
E+K L ++ + +IDGL G + A L E+ N+G + I G C+
Sbjct: 424 TELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCRE 483
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G V KA L+++M +P + L+
Sbjct: 484 GQVDKANVLIQKMEANGCTPDIITYNTLM 512
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 57/331 (17%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I + N M G D T +++L+ +C L + F +++ G+
Sbjct: 81 KIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLR-EGFAAFAGILRR-GYSPN 138
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV-------------- 251
+V Y +I+ L + ++ +A + +M+ G PD+V Y ++ G+
Sbjct: 139 IVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQ 198
Query: 252 -----------------------------IVQEDYVKAEELFDELLVLGLV--------- 273
+ +ED +A++LF+E+ G++
Sbjct: 199 EMLNDISRYEINCKPNVITYNIIVDGLCKVGRED--EAKQLFEEMKTQGMIPNEMLDQGL 256
Query: 274 -PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ T+NV I+ LCK+ V K++ M E G PD++TYN+L++ C V +LN RE
Sbjct: 257 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 316
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L M KG ++ +Y+++I+G + + EA L E L G +D + G+
Sbjct: 317 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 376
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G V A +L M ++ + + L
Sbjct: 377 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFL 407
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
MK G Y + L K + +F+A+ + ++KS K +I +++G+
Sbjct: 391 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 450
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A ELF++L G P+V TY + I+G C++ V+ +I ME G PD+ITYNT
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
L++ + +L + +L+ M K + + T SI++D L SK + + C
Sbjct: 511 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML-SKDEKYQEC 559
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F +V A ++ + M G + T + L +C+ L E + E+K F
Sbjct: 376 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF--EAMKLFTELKSSNFKL 433
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ + +I L K K+ A + ++ ++G +P++V YT++++G + KA L
Sbjct: 434 EIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLI 493
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++ G PD+ TYN + G + N +E ++++ M + PD IT + ++ L K
Sbjct: 494 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 552
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L+S+ + + S+ +L +M G + +I S +V A +L ++
Sbjct: 51 LLTSIAKMKHYST--VLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILK 108
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +PD +T ++ G+ V+ +A LFD+++ G P+V TY INGLCK N A
Sbjct: 109 LGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSA 168
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
I+++ ME+ +PDV+ Y +++ +LCK R++ L +M +GI ++ TY+ ++
Sbjct: 169 AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVH 228
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + + LL + +N + +F + LC+ G V +A E++ M + V P
Sbjct: 229 ALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 288
Query: 415 GARVWEALL 423
+ L+
Sbjct: 289 DVVTYTTLM 297
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 187/414 (45%), Gaps = 58/414 (14%)
Query: 64 LSSLLHSFS-IYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI-- 120
L L SF+ + + PPP F K L ++ S+VL + ++F P ++
Sbjct: 26 LDDALSSFNRLLHMHPPPSIVDFA-KLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN 84
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMIND 163
LI ++ +R + ++ KI K ++G A+ + + MI++
Sbjct: 85 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 144
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF + T +++ +C+ + S+ + ++ M++ +V YT++I SL K +V
Sbjct: 145 GFQPNVVTYGTLINGLCKVGNTSA--AIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVT 202
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A + +QM GI PDI YT +++ + ++ L ++++ ++PDV ++ +
Sbjct: 203 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVV 262
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ LCK+ V +++ M + G +PDV+TY TL+ C E++ ++ M KG
Sbjct: 263 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 322
Query: 344 LNLQTYSIMID-------GLAS---------------KGDIIEAC------------GLL 369
++ +Y+ +I+ GL S KG +E LL
Sbjct: 323 PDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLL 382
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA-RVWEAL 422
E +N + +F + LC+ G V +A +++ M + V P A +V++ +
Sbjct: 383 NEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTM 436
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 2/201 (0%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL N++ P IV + +L + + Y L ++ G+ P+VYT N+ I
Sbjct: 28 DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 87
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N C N V ++A + +LG +PD T+ TL++ LC ++ L +M +G
Sbjct: 88 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 147
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFDETICGLCQRGLVRKALE 402
N+ TY +I+GL G+ A LL ++ +G C ++ I LC+ V +A
Sbjct: 148 PNVVTYGTLINGLCKVGNTSAAIRLL-RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN 206
Query: 403 LLKQMADKDVSPGARVWEALL 423
L QM + +SP + +L+
Sbjct: 207 LFSQMVGQGISPDIFTYTSLV 227
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 5/306 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + GFA +L M+ GF + +++L +C R+L + + ++EM++
Sbjct: 119 QMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC--RNLECGKAVSLLREMRRNSLMPD 176
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y VIR + +++ AL + N+MK G +V + ++++ +A
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +GL D+ Y I G C ++ G + + E G P ITYNTL++ CK+
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L E+ + M +G+ N+ TY+ +IDGL G EA LL + K + ++
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS---FIRLVD 442
I LC+ GLV A+E+++ M + P + LL +K D S ++ L D
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 443 QILNTP 448
P
Sbjct: 417 SSYTDP 422
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 112/231 (48%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F ++M + V + ++ V+ K A G+L M G ++ + ++L G+
Sbjct: 94 FYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC 153
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ KA L E+ L+PDV++YN I G C+ +E +++ M+ G ++
Sbjct: 154 RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+ L+ A CK +++ +KEMK+ G+ +L Y+ +I G G++ L +E
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +G + ++ I G C+ G +++A E+ + M ++ V P + L+
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A+EI+ M D T +++L +C + DL L ++ ++ Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L K+ ++ AL I + + D V ++LN + D KA EL+ ++
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+V + TY I+G CK + ++ M +P V YN LL +LCK L++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L +EM+ ++ +++IMIDG GDI A LL GL + + I
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ G + +A+ +M D P A + +++L +S+
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
DY ++ SL K+ + A + +M+ D PD+V + ++++G + D AE L +
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GL PD++TY+ IN K ++ I M + G +PD +++L+ E
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMID 354
++L ELVK++ K IVL+ + ++D
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMD 677
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 114/265 (43%), Gaps = 37/265 (13%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A++I + ++ D T +++L+S + D+ ++ + +++
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV--NKAMELWKQISDSKIVRNSD 495
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K + A G+L +M+ ++P + Y +L+ + + +A LF+E+
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PDV ++N+ I+G K ++++ ++ M G PD+ TY+ L +
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL---------I 606
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
NR +L G + EA ++ ++ G + + D
Sbjct: 607 NRFLKL--------------------------GYLDEAISFFDKMVDSGFEPDAHICDSV 640
Query: 388 ICGLCQRGLVRKALELLKQMADKDV 412
+ +G K EL+K++ DKD+
Sbjct: 641 LKYCISQGETDKLTELVKKLVDKDI 665
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 60/148 (40%)
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ N + L + N E M E + + ++ + LL+ ++R+ ++
Sbjct: 72 AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M +G N+ ++I++ GL + +A LL E L ++ I G C+
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+ KALEL +M S W L+
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILI 219
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 132/251 (52%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S ++ S+C+ R D+ L EM+ G ++ Y+++I L + DA +L+ M
Sbjct: 257 STVIDSLCKYR--HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I P++V ++ +++ + + VKAE+L++E++ + P+++TY+ ING C + +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+M+ M P+V+TYNTL+ CK + +++ EL +EM +G+V N TY+ +
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G D A + ++ ++ G+ ++ + GLC+ G + KA+ + + + +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 413 SPGARVWEALL 423
P + ++
Sbjct: 495 EPDIYTYNIMI 505
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 120/228 (52%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M KLG+ +V +++ ++ DA+ +++QM G KPD V +T +++G+ +
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+A L D ++ G PD+ TY +NGLCK+ + + + ++ ME + +V+ Y+
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
T++ +LCK R + L EM+ KG+ N+ TYS +I L + G +A LL + + +
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ F I ++G + KA +L ++M + + P + +L+
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 131/264 (49%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G+ D T + +L+ C +S + + V +M ++G+ V +T +I L
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRIS--DAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K +A+ ++++M G +PD+V Y V+NG+ + D A L +++ + +V Y
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+ LCK + + + + ME G +P+VITY++L+ LC + L+ +M
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ I NL T+S +ID KG +++A L EE + + + + I G C + +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A ++L+ M KD P + L+
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLI 400
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 152/324 (46%), Gaps = 29/324 (8%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE--NFETPEFIFIDLIKTYADAHRFQ 133
C+P Y V+ L + D L+ + K E E I+ +I +
Sbjct: 214 CQPDLVTYGAVVNGLCKRG---DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 134 DSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
D++NLF ++ R N + ++ +++C+ N G D S +LS + E R ++ +
Sbjct: 271 DALNLFTEMENKGVRPNVITYS-SLISCLCNYGRWSDA---SRLLSDMIE-RKINPN--- 322
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+V ++ +I + VKK K+ A + +M I P+I Y+ ++NG
Sbjct: 323 --------------LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ + +A+++ + ++ +P+V TYN ING CK V+ G+++ M + G +
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TY TL+ + R+ + + + K+M G+ N+ TY+I++DGL G + +A + E
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 372 ALNKGLCTQSSMFDETICGLCQRG 395
+ ++ I G+C+ G
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 2/257 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +LS++ + D ++ F ++M+ LG + Y +I + ++ AL +L +M
Sbjct: 82 SKLLSAIAKMNKF--DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM 139
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G +PDIV +LNG A L D+++ +G PD T+ I+GL N
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 199
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ +I M + G +PD++TY ++ LCK + + L+ +M+ I N+ YS +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
ID L +A L E NKG+ + I LC G A LL M ++ +
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 413 SPGARVWEALLLSSVSK 429
+P + AL+ + V K
Sbjct: 320 NPNLVTFSALIDAFVKK 336
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 134/276 (48%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A+ +++ M+ G+ D T + ++ + S E + + M + G +V
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS--EAVALIDRMVQRGCQPDLV 219
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y V+ L K+ AL +LN+M++ I+ ++V Y+ V++ + A LF E+
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ P+V TY+ I+ LC ++++ M E P+++T++ L+ A K +L
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ +L +EM + I N+ TYS +I+G + EA +LE + K ++
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ V K +EL ++M+ + + + L+
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 105/216 (48%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
DY V+R+ + ++ DA+G+ M P I+ ++ +L+ + + +++
Sbjct: 45 DYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM 104
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+LG+ ++YTYN+ IN C+ + + + ++ M +LG +PD++T N+LL C +
Sbjct: 105 EILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRI 164
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ LV +M G + T++ +I GL EA L++ + +G +
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+RG AL LL +M + ++ ++
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 93 NSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS--VNLFYKIPKFRINRV 150
N S+++D K+ E ++ ++IK D + F S +N F ++R+
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF-----CMLDRL 374
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
G A ++L MI + T + +++ C+ + + D+ + +EM + G V YT
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV--DKGMELFREMSQRGLVGNTVTYT 432
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I + +A + QM S G+ P+I+ Y ++L+G+ KA +F+ L
Sbjct: 433 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 492
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAG 295
+ PD+YTYN+ I G+CK + G
Sbjct: 493 TMEPDIYTYNIMIEGMCKAGKWKMG 517
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 133/273 (48%), Gaps = 6/273 (2%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF EIL C G+ ++++ C+ D+ + + K G +V
Sbjct: 128 GFYEEILEC----GYPASLYFFNILMHRFCKDGDIRVAQ--SVFDAITKWGLRPSVVSXN 181
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ ++ + + + + M + G++PD+ Y++++NG+ + A E FDE+LV
Sbjct: 182 TLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVK 241
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GLVP+ T+ I+G CK V+ ++ M PD+ITYNTL+ LCK +L +
Sbjct: 242 GLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 301
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L+ +M KG+ + TY+ +IBG +GD+ A + + + + ++ I G
Sbjct: 302 HDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISG 361
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LCQ G A ++L++M + P + ++
Sbjct: 362 LCQEGRSVDAEKMLREMLSVRLKPDTGTYTMII 394
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 112/215 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA ++M G+ P+ V +T +++G A+E++ ++L
Sbjct: 215 YSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQML 274
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L+PD+ TYN I GLCK+ +++ +I M G KPD ITY TL+ CK +L+
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLD 334
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I GL +G ++A +L E L+ L + + I
Sbjct: 335 SAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMII 394
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C++G V K +LLK+M +P + L+
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 429
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + + + M+ G D T S++++ +C++ + D+ EM G
Sbjct: 189 RLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKM--DDANEXFDEMLVKGLVPN 246
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T +I K +V A I QM S + PD++ Y ++ G+ + D +A +L D
Sbjct: 247 GVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 306
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + GL PD TY IBG CK+ ++++ + M + + D + Y L+ LC+
Sbjct: 307 DMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEG 366
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM + + TY+++I+ KGD+ + LL+E G
Sbjct: 367 RSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
A E + M+ G +G T + ++ C+ + DL+ + ++M ++ Y
Sbjct: 231 ANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKE----IYKQMLSQSLLPDLITYN 286
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I L KK + A +++ M G+KPD + YT ++BG + D A E ++
Sbjct: 287 TLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQE 346
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
+ D Y I+GLC++ KM+ M + KPD TY ++ CK ++ +
Sbjct: 347 NIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKG 406
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDG 355
+L+KEM+ G ++ TY+++++G
Sbjct: 407 SKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 51/328 (15%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ L +I GF V+ T + +L +C + +SD + ++ M +LG
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKR-TSDAMDIVLRRMTELGCIPN 157
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQEDYVKA-- 260
+ Y N++ L + + +AL +L+ M D G PD+V YT V+NG + D KA
Sbjct: 158 VFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 261 ---------------------------------------------EELFDELLVLGLVPD 275
E+LFD ++ +G+ PD
Sbjct: 218 TYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPD 277
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ TY+ I+G C ++ +K+++ M +G KP+ +TY+TL+ CK+ + L K
Sbjct: 278 IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 337
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM+ G+ ++ TY+I++ GL A L G + S ++ + GLC+
Sbjct: 338 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 397
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
L AL++ + + D+ AR + ++
Sbjct: 398 LTDDALQMFQNLCLMDLKLEARTFNIMI 425
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 21/250 (8%)
Query: 149 RVGFAIEILN-CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+G +I+ + DG+C+ GK DE + + M +G V
Sbjct: 271 RIGVKPDIITYSTLIDGYCLAGKM----------------DEAMKLLSGMVSVGLKPNTV 314
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +I K ++ DAL + +M+S G+ PDI+ Y ++L G+ A+EL+ +
Sbjct: 315 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 374
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA--CMEELGSKPDVITYNTLLQALCKVR 325
G ++ TYN+ ++GLCK + ++M C+ +L K + T+N ++ AL KV
Sbjct: 375 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL--KLEARTFNIMIDALLKVG 432
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++L G+V N TY +M + + +G + E L + G S M +
Sbjct: 433 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 492
Query: 386 ETICGLCQRG 395
+ L QRG
Sbjct: 493 FIVRELLQRG 502
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD+ TY + I C+ ++ G + + + G + + IT+ LL+ LC + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 332 ELV-KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE-EALNKGLCTQSSMFDET-- 387
++V + M G + N+ +Y+ +++GL + EA LL A ++G + + T
Sbjct: 143 DIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I G + G KA +M D+ + P + +++ +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA 240
>gi|449479638|ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 183/409 (44%), Gaps = 34/409 (8%)
Query: 1 MVRSSALKRANLH-LRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQ-QIP 58
M SS +R LH L H + P +P K + +L K++ K TP T + + Q
Sbjct: 1 MSSSSPFRR--LHCLFNHSRSP-TPAFNKPNLSLSSLATKKSKKSPTATPLTDENRLQKL 57
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
Q I++S F N + Y ++ LA +F I +++ +K + + F+
Sbjct: 58 VQRFIINSESKQFRRKN-----DTYDSTVRFLAVRKKFSMIEEIIEAQKKYDEIKEEGFV 112
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRV--GFAIEILNCMINDGFCVDGKTCSLIL 176
I LI+ Y A F + LF ++P+ + R F +++C+ + F K +
Sbjct: 113 -IRLIRLYGKAGMFSQARKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVP 171
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + D+SS Y VI + + + A+ N M+ +G
Sbjct: 172 QELSIEADVSS---------------------YNIVINAYCEMDDFDKAILFFNHMEKNG 210
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
++PD+V + +L + + ++ E ++ + + PD+ +YN + G+ ++ GI
Sbjct: 211 MEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGI 270
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++A MEE KPDV YNTL+ + CK +L ++ ++K + N TY ++ L
Sbjct: 271 ELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLL 330
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
KGD L +EA+NK ++ + GL + +A +L++
Sbjct: 331 CEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLVE 379
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 111/238 (46%), Gaps = 7/238 (2%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
E+K+ GF ++ + K+FD L L ++ + + +L + +
Sbjct: 105 EIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERT------VRSFNALLVSCVKSK 158
Query: 256 DYVKAEELFDEL-LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
++ + E++F E+ L + DV +YN+ IN C+ ++ + I ME+ G +PD++T+
Sbjct: 159 EFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFNHMEKNGMEPDLVTF 218
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTLL AL + + + M+ K I +L +Y+ + G+ I + LL +
Sbjct: 219 NTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLDKRIQDGIELLAKMEE 278
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
K + +++ I C+ G + +A + ++ + +V P A + LL K DF
Sbjct: 279 KEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATTYRTLLPLLCEKGDF 336
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 153/307 (49%), Gaps = 9/307 (2%)
Query: 144 KFRINRV--GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
K R R+ GF EIL C G+ ++++ C++ ++ +++ + K
Sbjct: 113 KLRYFRLVWGFYKEILEC----GYPPSLYFFNILMHRFCKEGEMRLAQMV--FDAITKWS 166
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V + ++ ++ + + + + M + G++PD+ Y++++NG+ + +A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEAN 226
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
E+ +E+L GLVP+ T+ I+G CK V+ +++ M G PD+ITYNTL+ L
Sbjct: 227 EMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGL 286
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ +L + R+LV+EM KG+ + TY+ +IDG +GD+ L + + + +
Sbjct: 287 CRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDE 346
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLV 441
+ I GLC+ G A ++L++M + P + ++++ K V T+ L
Sbjct: 347 VTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTY-TMIMNEFCKTGDVKTASKLLR 405
Query: 442 DQILNTP 448
+ N P
Sbjct: 406 EMQRNGP 412
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE M G + Y+ +I L K+ K+ +A +LN+M +G+ P+ V +T +
Sbjct: 188 DEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTL 247
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G A E++ ++L G +PD+ TYN I GLC++ ++ ++ M G
Sbjct: 248 IDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGL 307
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KPD ITY TL+ CK +L EL K M + I L+ TY+ +I GL +G +A
Sbjct: 308 KPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEK 367
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+L E L GL + + + C+ G V+ A +LL++M PG
Sbjct: 368 MLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGV 416
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 114/228 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
V+ L+K G ++ G P + + ++++ + + A+ +FD +
Sbjct: 107 VLEHLMKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWS 166
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L P V ++N +NG + +++ G ++ + M G +PDV TY+ L+ LCK +++
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEAN 226
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E++ EM G+V N T++ +IDG G + A + ++ L++G ++ I GL
Sbjct: 227 EMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGL 286
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIR 439
C+RG + +A +L+++M K + P + L+ S + D T +R
Sbjct: 287 CRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELR 334
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+LN M+++G +G T + ++ C+ + D + ++M GF ++ Y +
Sbjct: 225 ANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKV--DLAMEIYKQMLSQGFLPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L ++ + A ++ +M G+KPD + YT +++G + D EL ++ +
Sbjct: 283 IYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D TY I+GLC++ KM+ M +G KPD TY ++ CK ++ +
Sbjct: 343 RLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L++EM+ G V + T
Sbjct: 403 LLREMQRNGPVPGVVT 418
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 129/252 (51%), Gaps = 3/252 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++I+ C+ R++ ++ L F++EM++LG Y+++++S K V A+ + +M
Sbjct: 48 NIIIDGYCKARNI--EKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEM 105
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ G +PDIV + ++L+G+ +A ELF + G PDV TYN I GLCK +
Sbjct: 106 PAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKL 165
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + ++ M++ P +TY TL+ LCK L + E+ ++M YS++
Sbjct: 166 DEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVL 225
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR-GLVRKALELLKQMADKD 411
+ L G ++EA + + K +C + + + GL + G +A +L+ +M K
Sbjct: 226 FNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKK 285
Query: 412 VSPGARVWEALL 423
++P + L+
Sbjct: 286 IAPDFYAYSILI 297
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 173/420 (41%), Gaps = 61/420 (14%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
+C P +Y+ +I + + L +E+ + TP + +++++
Sbjct: 39 HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPH-AYSSIVQSFCKTGNVSK 97
Query: 135 SVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
++++F ++P +R ++ A E+ M + G D T + +++
Sbjct: 98 AMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIA 157
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+C+ + L DE + ++ MK+ V YT +I L K ++ A + +M
Sbjct: 158 GLCKWKKL--DEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPC 215
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDE--------------LLVLGL----------- 272
Y+++ N + V+A ++ + L+VLGL
Sbjct: 216 ACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAA 275
Query: 273 -----------VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
PD Y Y++ INGLCK +M M G P V+TYNTLL+ L
Sbjct: 276 KLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGL 335
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
+L EL M +G + + +Y++MI G + GD EA L ++ + G+ +
Sbjct: 336 LSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNT 395
Query: 382 SMFDETICGLCQRGLVRKALELLKQMA----DKDVSPGARVWEALLLSSVSKLDFVNTSF 437
++ I G + A L K+M DK +P +E +L+SS+ K D V +F
Sbjct: 396 WTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYE-ILISSLCKTDQVEEAF 454
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 132/278 (47%), Gaps = 8/278 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +++ M+ D S++++ +C+ R E QEM+ G +V Y +
Sbjct: 274 AAKLVTEMMGKKIAPDFYAYSILINGLCKAR--RPGEAKEMFQEMRGRGISPTVVTYNTL 331
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L+ K+ DA+ + M G PD Y +++ G D +A LF +++ G+
Sbjct: 332 LEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGI 391
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS----KPDVITYNTLLQALCKVRELN 328
V + +TYN I G K + + M+ + P++ TY L+ +LCK ++
Sbjct: 392 VLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVE 451
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L+ M+ KG V +L+ + +++ LA G + +A L +E +++ C Q +
Sbjct: 452 EAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKE-MSRINCQQLVGSSNIL 510
Query: 389 C-GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
G+ +RG V +A + LKQM D + P ++ L++
Sbjct: 511 LDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVG 548
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 1/201 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y N+I L K + +A L +M P++V Y ++++G + KA E+
Sbjct: 13 YNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREME 71
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
LG P + Y+ + CK NV + + A M G +PD++ +N LL L + R+++
Sbjct: 72 ELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIH 131
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
REL + M +G ++ TY+ MI GL + EA LLE + + + I
Sbjct: 132 EARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLI 191
Query: 389 CGLCQRGLVRKALELLKQMAD 409
LC+ +++A E+ ++MA+
Sbjct: 192 DHLCKFTRLQQAYEVFEKMAE 212
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M G+ P+ + Y +++ + + + E + + + P+V +YN+ I+G CK N
Sbjct: 1 MLEAGLFPNAILYNNLIS-CLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARN 59
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+E + + MEELG P Y++++Q+ CK +++ ++ EM KG ++ +++
Sbjct: 60 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
++ GL I EA L ++G ++ I GLC+ + +A+ LL++M +D
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179
Query: 412 VSPGARVWEALL 423
VSP + L+
Sbjct: 180 VSPTFVTYTTLI 191
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 116/255 (45%), Gaps = 6/255 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ M++ G D + +L++ C D ++E Q+M K G Y +
Sbjct: 344 AMELTYFMLDQGRLPDTCSYNLMIRGFCANGD--TNEAYCLFQDMIKDGIVLNTWTYNFM 401
Query: 213 IRSLVKKEKVFDALGILNQMKS---DGI-KPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
I +K E A + +M+S D + P++ Y ++++ + + +A +L +
Sbjct: 402 IVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 461
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G VP + + V ++ L + ++ ++ M + + V + N LL + + ++
Sbjct: 462 DKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVD 521
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ +K+M GIV + TY ++ GL +G +A L+EE + G ++ + +
Sbjct: 522 EAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLL 581
Query: 389 CGLCQRGLVRKALEL 403
LC +G + A E
Sbjct: 582 GALCAQGDFQGAYEF 596
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L GL P+ YN I+ LCK + + M + P+V++YN ++ CK R
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARN 59
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + ++EM+ G YS ++ G++ +A + E KG F+
Sbjct: 60 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ GL + + +A EL + M + P + ++ L KLD
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLD 166
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 189/430 (43%), Gaps = 68/430 (15%)
Query: 31 QTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTL 90
+TL+Q +N + ++P + + P + + SF + + ++ +I+
Sbjct: 35 RTLNQNNDLENGSEPESSPISDKIFSSPPK-------MGSFKVGD-----STFYSLIENY 82
Query: 91 AENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIP-KFRIN- 148
A +S F + VL+ + + EN E F + K Y AH ++ LFY++ +F
Sbjct: 83 AYSSDFNSLEKVLNRM-RLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKP 141
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
V +LN +I GF R L E V K + ++
Sbjct: 142 TVKSFNSVLNVIIQAGF---------------HDRAL---EFYNHVVGAKDMNILPNVLS 183
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +I+S+ K V +A+ + +M PD Y +++G+ + +A L DE+
Sbjct: 184 FNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQ 243
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ G P T+NV INGLCK+ + K++ M G P+ +TYNTL+ LC +L+
Sbjct: 244 IEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 303
Query: 329 R-----------------------LRELVKE------------MKWKGIVLNLQTYSIMI 353
+ + LVK+ M+ +G ++N YS+++
Sbjct: 304 KALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLV 363
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GL +G EA L +E+++KG + ++ + GLC+ +A+++L +M DK +
Sbjct: 364 SGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCA 423
Query: 414 PGARVWEALL 423
P A + +L+
Sbjct: 424 PNAFTFSSLM 433
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 39/357 (10%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C P Y +I L + + D + VL +E+R + E+++ L+
Sbjct: 307 SLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEER-GYIVNEYVYSVLVSG 365
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ ++++ LF K +++ +L + DG C RD
Sbjct: 366 LFKEGKSEEAMRLF----KESMDKGCKLNTVLYSALVDGLC----------------RDR 405
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
DE + + EM G ++++++ + A+ + M + VCY+
Sbjct: 406 KPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYS 465
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM---IACM 302
++++G+ ++A ++ ++L G PDV Y+ I GLC +VE +K+ + C+
Sbjct: 466 VLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCL 525
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E S+PDVITYN L ALCK ++R +L+ M +G +L T +I + L K D
Sbjct: 526 EP-DSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDP 584
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ + DE + L +R A ++++ M K +SP A W
Sbjct: 585 PQ--------------DGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTW 627
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 168/394 (42%), Gaps = 39/394 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF--IFIDLIK 124
L + C P Y ++ L + + + S+LD ++ F +P + I+ +
Sbjct: 203 LFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLC 262
Query: 125 TYADAHRFQDSV-NLFYK--IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
D R V N+F K +P N V + N +I+ G C+ GK
Sbjct: 263 KKGDFTRVTKLVDNMFLKGCVP----NEVTY-----NTLIH-GLCLKGKL---------- 302
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
D+ L + M V Y +I LVK+ + D +L M+ G +
Sbjct: 303 ------DKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNE 356
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y+++++G+ + +A LF E + G + Y+ ++GLC+ + +K+++
Sbjct: 357 YVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSE 416
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M + G P+ T+++L++ +V ++ E+ K+M N YS++I GL G
Sbjct: 417 MTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGK 476
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM--ADKDVSPGARVW 419
++EA + + L G + I GLC G V +AL+L +M + D P +
Sbjct: 477 VMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITY 536
Query: 420 EALL-----LSSVSK-LDFVNTSFIRLVDQILNT 447
L SS+S+ +D +N+ R D L T
Sbjct: 537 NILFNALCKQSSISRAVDLLNSMLDRGCDPDLVT 570
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 30/306 (9%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ----EMKKLGFCFGMV 207
+A ++L M+ G ++++ S+C +D + +LL + EM G +
Sbjct: 349 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKI 408
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ ++ R L K A ++ +M G PD Y+ VLN + A LF+E+
Sbjct: 409 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 468
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GLV DVYTY + ++ CK +E K M E+G P+V+TY L+ A K +++
Sbjct: 469 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 528
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK------------ 375
+ EL + M +G + N+ TYS +IDG G + +AC + E
Sbjct: 529 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 588
Query: 376 --------GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
+ T ++ D G C+ V +A +LL M+ + P V++AL+ L
Sbjct: 589 YDDNSERPNVVTYGALLD----GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 644
Query: 426 SVSKLD 431
V KLD
Sbjct: 645 KVGKLD 650
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 6/248 (2%)
Query: 163 DGFCVDG---KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
DG C G K C I +C +D+ ++ + ++ +V Y ++ K
Sbjct: 555 DGHCKAGQVEKACQ-IFERMCGSKDVPDVDM--YFKQYDDNSERPNVVTYGALLDGFCKS 611
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A +L+ M +G +P+ + Y +++G+ +A+E+ E+ G +YTY
Sbjct: 612 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 671
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+ K + K+++ M E P+V+ Y ++ LCKV + + +L++ M+
Sbjct: 672 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 731
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG N+ TY+ MIDG G I LLE +KG+ + I C+ G +
Sbjct: 732 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 791
Query: 400 ALELLKQM 407
A LL++M
Sbjct: 792 AHNLLEEM 799
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K+ +A + +M G + Y+ +++ + A ++ ++L
Sbjct: 636 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 695
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
P+V Y I+GLCK + K++ MEE G +P+V+TY ++ + ++
Sbjct: 696 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 755
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL++ M KG+ N TY ++ID G + A LLEE T ++ + + I
Sbjct: 756 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 815
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + + ++L LL ++ D +P V+ L+
Sbjct: 816 EGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLI 848
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%)
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
Q + +P++V Y +L+G +A +L D + + G P+ Y+ I+GLCK
Sbjct: 586 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 645
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
++ ++ M E G + TY++L+ KV+ + +++ +M N+
Sbjct: 646 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 705
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ MIDGL G EA L++ KG + I G G + LELL++M
Sbjct: 706 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 765
Query: 409 DKDVSPGARVWEALL 423
K V+P + L+
Sbjct: 766 SKGVAPNYVTYRVLI 780
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 95/207 (45%), Gaps = 6/207 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I L + +A+ LN+M++ P++V Y+ +L G + ++ + + + +
Sbjct: 262 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 321
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+++ G P +N ++ C + K++ M + G P + YN L+ ++C ++
Sbjct: 322 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 381
Query: 327 ------LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L+ + EM G+VLN S L S G +A ++ E + +G
Sbjct: 382 SLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 441
Query: 381 SSMFDETICGLCQRGLVRKALELLKQM 407
+S + + + LC + A L ++M
Sbjct: 442 TSTYSKVLNYLCNASKMELAFLLFEEM 468
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 133/343 (38%), Gaps = 31/343 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + S+ CEP Y +I L + + + V + + F + + LI Y
Sbjct: 620 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH-GFPATLYTYSSLIDRY 678
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R QD + + K N + I MI DG C GKT
Sbjct: 679 FKVKR-QDLASKV--LSKMLENSCAPNVVIYTEMI-DGLCKVGKT--------------- 719
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE +Q M++ G +V YT +I K+ L +L +M S G+ P+ V Y +
Sbjct: 720 -DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 778
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ A L +E+ Y I G K+ I+ + ++E+G
Sbjct: 779 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF-----IESLGLLDEIG 833
Query: 307 ---SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL--NLQTYSIMIDGLASKGD 361
+ P + Y L+ L K + L L++E+ L TY+ +I+ L
Sbjct: 834 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 893
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ A L E KG+ + F I GL + + +AL LL
Sbjct: 894 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 3/219 (1%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
AL L ++K +P Y ++ + + A + E+ + L D +T +
Sbjct: 178 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 237
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
LCK + ++ E PD + Y L+ LC+ + + M+ +
Sbjct: 238 SLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ TYS ++ G +K + +L + +G +F+ + C G A +LL
Sbjct: 295 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 354
Query: 405 KQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQ 443
K+M PG V+ L+ S D +N + L ++
Sbjct: 355 KKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEK 393
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 1/230 (0%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ MK GF +V Y +I SL + + AL NQ+ + P +V YT+++ ++
Sbjct: 112 LDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIEATLL 171
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
Q +A +L DE+ + L PDV+ YN I +C++ V+ ++I+ + G DVIT
Sbjct: 172 QGGIDEAIKLLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSKGYALDVIT 230
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN LL++L + EL+ +M KG N+ TYS++I L G + E GLL++
Sbjct: 231 YNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMK 290
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
KGL +D I LC+ G V A+E+L M P + +L
Sbjct: 291 KKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTIL 340
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 19/287 (6%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFC 203
R V A E+++ + + G+ +D T +++L S+ Q + GF + +M G
Sbjct: 205 REGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEA----GFELMSDMVAKGCE 260
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEE 262
+V Y+ +I SL + KV + +G+L MK G++PD CY ++ V+ +E V A E
Sbjct: 261 ANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLI-AVLCKEGRVDLAIE 319
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ D ++ G VPD+ YN + LCKQ + + + + E+G P+ +YNT+ AL
Sbjct: 320 VLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALG 379
Query: 323 ----KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL-EEALNKGL 377
KVR L + E++ + I Y+ +I L G + EA LL + +
Sbjct: 380 SSGHKVRALGMILEMLDXVDPDVI-----AYNSLISCLCRDGMVDEAIELLVDMEMESSE 434
Query: 378 CTQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C S + ++ + GLC+ G V A E+L M DK P + L+
Sbjct: 435 CKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLI 481
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 115/240 (47%), Gaps = 3/240 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D + + G+ ++ Y ++RSL + K +++ M + G + ++V Y+++
Sbjct: 210 DRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVL 269
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ + + L ++ GL PD Y Y+ I LCK+ V+ I+++ M G
Sbjct: 270 ISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGC 329
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD++ YNT+L LCK + + + +++ G N +Y+ + L S G + A G
Sbjct: 330 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALG 389
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL--KQMADKDVSPGARVWEALLLS 425
++ E L+ + ++ I LC+ G+V +A+ELL +M + P + +LL
Sbjct: 390 MILEMLDX-VDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 448
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 133/262 (50%), Gaps = 5/262 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
E+++ M+ G + T S+++SS+C RD +E +G +++MKK G Y +
Sbjct: 247 GFELMSDMVAKGCEANVVTYSVLISSLC--RDGKVEEGVGLLKDMKKKGLEPDGYCYDPL 304
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K+ +V A+ +L+ M SDG PDIV Y +L + Q+ +A +F++L +G
Sbjct: 305 IAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGC 364
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +YN + L + + MI M + PDVI YN+L+ LC+ ++ E
Sbjct: 365 SPNASSYNTVFSALGSSGHKVRALGMILEMLDX-VDPDVIAYNSLISCLCRDGMVDEAIE 423
Query: 333 LVKEMKWKGIVL--NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ +M+ + ++ +Y+I++ GL G + +A +L ++KG + + I G
Sbjct: 424 LLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEG 483
Query: 391 LCQRGLVRKALELLKQMADKDV 412
+ G + A +L + + D
Sbjct: 484 IGFGGWLNDARDLATTLVNMDA 505
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 174/396 (43%), Gaps = 46/396 (11%)
Query: 90 LAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINR 149
L +S CD+S +HI F+TP +Y + R S + + K
Sbjct: 52 LNSSSTICDLSPPGNHIHIP--FDTPFSSS----SSYFSSPRLHPSPQIPHPSAK-PTES 104
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+ A ++L+ M N GF D T ++++ S+C + L + L F ++ K F +V Y
Sbjct: 105 IPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHA--ALEFKNQLLKENFNPTVVTY 162
Query: 210 TNVIRSLVKKEKVFDALGILNQM----------------------------------KSD 235
T +I + + + + +A+ +L++M S
Sbjct: 163 TILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIXMCREGYVDRAFEVISSISSK 222
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G D++ Y ++L + Q + EL +++ G +V TY+V I+ LC+ VE G
Sbjct: 223 GYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEG 282
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ ++ M++ G +PD Y+ L+ LCK ++ E++ M G V ++ Y+ ++
Sbjct: 283 VGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 342
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L + EA + E+ G +S ++ L G +AL ++ +M D V P
Sbjct: 343 LCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDX-VDPD 401
Query: 416 ARVWEALLLSSVSKLDFVNTSFIRLVD-QILNTPCK 450
+ + L+S + + V+ + LVD ++ ++ CK
Sbjct: 402 VIAYNS-LISCLCRDGMVDEAIELLVDMEMESSECK 436
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 141/306 (46%), Gaps = 37/306 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ + M G + ++L +C+ + D GF MK+ G C G + YT +
Sbjct: 352 ALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEF--DLARGFYMRMKRNGVCVGRITYTGM 409
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K + +A+ +LN+M DGI PDIV Y+ ++NG A+E+ + +GL
Sbjct: 410 IDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGL 469
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ Y+ I C+ ++ I++ M G+ PD T+N L+ +LCK ++ E
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE--------------ALNKGLC 378
++ M GI+ N ++ +I+G S G+ ++A + +E +L KGLC
Sbjct: 530 FMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 379 ---------------------TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ M + I +C+ G + KA+ L +M + + P +
Sbjct: 590 KGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSF 649
Query: 418 VWEALL 423
+ +L+
Sbjct: 650 TYTSLI 655
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 146/363 (40%), Gaps = 64/363 (17%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC------------------ 159
+F LI+ Y QDS+ +F + + GF + C
Sbjct: 125 VFDILIRVYLREGMIQDSLEIFRLMGLY-----GFNPSVYTCNAILGSIVKSCEDVSVWS 179
Query: 160 ----MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
M+ C D T +++++ +C + L +Q+M+K G+ +V Y V+
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYL--MQKMEKSGYAPTIVTYNTVLHW 237
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMV---------------------------- 247
KK + A+ +L+ M G+ D+ Y M+
Sbjct: 238 YCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297
Query: 248 -------LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
LNG + + A +L +E+L GL P+ T+N I+G + N + +KM
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
ME G ++Y LL LCK E + R MK G+ + TY+ MIDGL G
Sbjct: 358 MMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+ EA +L E G+ + I G C+ G ++ A E++ ++ +SP ++
Sbjct: 418 FLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYS 477
Query: 421 ALL 423
L+
Sbjct: 478 TLI 480
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 151/344 (43%), Gaps = 40/344 (11%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
F+F L+ TY + ++ ++ R + ++EI M GF TC+ I
Sbjct: 106 SFVFGALMATYRLCNSNPSVFDILIRV-YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 164
Query: 176 LSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
L S+ + D+S + F++EM K C + + +I L + + ++ +M+
Sbjct: 165 LGSIVKSCEDVS---VWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEK 221
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P IV Y VL+ + + A EL D + + G+ DV TYN+ I+ LC+ N
Sbjct: 222 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAK 281
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
G ++ M + P+ +TYNTLL ++ R+L+ EM G+ N T++ +ID
Sbjct: 282 GYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALID 341
Query: 355 GLASKGDIIEAC------------------GLLEEALNK-----------------GLCT 379
G S+G+ EA G+L + L K G+C
Sbjct: 342 GHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ G + +A+ +L +M+ + P + AL+
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALI 445
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 146/337 (43%), Gaps = 39/337 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ R+ A EI+ + G +G S ++ + C L E + + M G
Sbjct: 450 RVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK--ETIRIYEAMILEGNTPD 507
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ ++ SL K KV +A + M SDGI P+ V + ++NG + +KA +FD
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFD 567
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +G P +TY + GLCK ++ A K + ++ + + D + NTL+ A+CK
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSG 627
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG--------- 376
L++ L EM + I+ + TY+ +I GL KG + A +EA +G
Sbjct: 628 NLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMY 687
Query: 377 LCTQSSMF---------------------------DETICGLCQRGLVRKALELLKQMAD 409
C MF + I G + G + K +LL +M +
Sbjct: 688 TCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGN 747
Query: 410 KDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
++ P + +LL SK V+TSF+ IL+
Sbjct: 748 QNQGPNLTTYN-ILLHGYSKRKHVSTSFMLYRSMILS 783
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 4/232 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ S+VK + L +M I PD+ + +++N + + + K+ L ++ G
Sbjct: 164 ILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSG 223
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P + TYN ++ CK+ +A I+++ M G DV TYN L+ LC+ +
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGY 283
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L+++M+ + I N TY+ +++G +++G ++ A LL E L GL F+ I G
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGH 343
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK---LDFVNTSFIRL 440
G ++AL++ M K + G V +LL + K D ++R+
Sbjct: 344 ISEGNFKEALKMFHMMEAKGL-IGTEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 136/311 (43%), Gaps = 37/311 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R AIE+L+ M G D T ++++ +C + LL +++M+K V
Sbjct: 242 GRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLL--LRDMRKRMIHPNEV 299
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ + KV A +LN+M + G+ P+ V + +++G I + ++ +A ++F +
Sbjct: 300 TYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMM 359
Query: 268 LVLGLVPDVYTYNVYINGLC---------------KQNNVEAG----------------- 295
GL+ +Y V ++GLC K+N V G
Sbjct: 360 EAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 296 ---IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ M+ M + G PD++TY+ L+ C+V L +E+V + G+ N YS +
Sbjct: 420 DEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G + E + E + +G F+ + LC+ G V +A E ++ M +
Sbjct: 480 IYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 413 SPGARVWEALL 423
P A ++ L+
Sbjct: 540 LPNAVSFDCLI 550
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 114/237 (48%), Gaps = 1/237 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F Q+M KLG +V +I + K+ +L +M + P++ Y ++L+G
Sbjct: 706 FRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYS 765
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
++ + L+ +++ G++PD T I G+C+ N +E G+K++ G + D
Sbjct: 766 KRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRH 825
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+N L+ C E+N ++V M GI L+ T ++ L E+ +L E
Sbjct: 826 TFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEM 885
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+G+ +S + + GLC+ G ++ A + ++M + P V E+ ++ +++K
Sbjct: 886 SKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICP-PNVAESAMVRALAK 941
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 108/248 (43%), Gaps = 2/248 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + ++IL I G VD T ++++S C ++ + V M LG
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEI--NWAFDMVNVMTSLGISLDKN 860
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
++ L + + ++ +L++M GI P+ Y +LNG+ D A + +E+
Sbjct: 861 TCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEM 920
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + P + + L K + ++ M ++ P + ++ TL+ CK +
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNV 980
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL M G+ L+L +Y+++I GL +KGD+ A L EE G + +
Sbjct: 981 TEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKAL 1040
Query: 388 ICGLCQRG 395
+ G+ +G
Sbjct: 1041 VGGILSQG 1048
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 112/292 (38%), Gaps = 69/292 (23%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQ---------------RDLSSDE--------------- 189
MI G D TC I+ +CE R + D
Sbjct: 780 MILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGE 839
Query: 190 ---LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
V M LG ++ L + + ++ +L++M GI P+ Y
Sbjct: 840 INWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 899
Query: 247 VLNGV----------IVQEDYV----------------------KAEE---LFDELLVLG 271
+LNG+ +V+E+ + KA+E L +L +
Sbjct: 900 LLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMK 959
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
LVP + ++ ++ CK NV +++ M G K D+++YN L+ LC ++
Sbjct: 960 LVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAF 1019
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG-LLEEALNKGLCTQSS 382
EL +EMK G + N+ TY ++ G+ S+G +L++ L +G T S
Sbjct: 1020 ELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGFITAMS 1071
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/319 (18%), Positives = 140/319 (43%), Gaps = 39/319 (12%)
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
VD C+ +++++C+ +L D+ + EM + YT++I L +K K A+
Sbjct: 611 VDTVMCNTLITAMCKSGNL--DKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAI 668
Query: 227 GILNQMKSDG-IKPDIVCYTMVLNGVI-------------------VQEDYVKAEELFDE 266
+ ++ G + P+ V YT ++G+ + D V + D
Sbjct: 669 LFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDG 728
Query: 267 LLVLGLV----------------PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+G + P++ TYN+ ++G K+ +V + M G PD
Sbjct: 729 YSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPD 788
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+T +++ +C+ L +++K +G+ ++ T++++I + G+I A ++
Sbjct: 789 KLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVN 848
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
+ G+ + D + L + +++ +L +M+ + +SP +R + LL+ + ++
Sbjct: 849 VMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG-LLNGLCRV 907
Query: 431 DFVNTSFIRLVDQILNTPC 449
+ T+F+ + I + C
Sbjct: 908 GDIKTAFVVKEEMIAHKIC 926
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 130 HRFQDSVNLFYKIPKFRINRVGFA-IEILN--CMIND---GFCVD-----GKTCSLILSS 178
HRFQ+S + +++ K I+ I +LN C + D F V K C ++
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 179 VCEQRDLS----SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
R L+ +DE ++ M K+ + +T ++ K V +AL + M +
Sbjct: 933 SAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSN 992
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G+K D+V Y +++ G+ + D A ELF+E+ G + +V TY + G+ Q +
Sbjct: 993 CGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFS 1052
Query: 295 GIKMI 299
G +I
Sbjct: 1053 GTDII 1057
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 164/350 (46%), Gaps = 17/350 (4%)
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCD---ISSVLDHIEKRENFETPEFIF 119
+ +SL+ SF + C + H + K + D I++ +D + K E +F
Sbjct: 266 VYTSLIRSF--FKCGRKEDG-HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALF 322
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFA---IEILNCMINDGFCVDGKTCSLIL 176
++ +AH F Y I + + G A E+ M G +D + ++
Sbjct: 323 REI-----NAHGFIPDAR-SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVI 376
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
C+ ++ L ++EMK G +V Y +VI L K +++ +A + + KS+G
Sbjct: 377 DGFCKSGKVNKAYQL--LEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 434
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
IK ++V Y+ +++G +A + +EL+ GL P+VYT+N ++ L K + +
Sbjct: 435 IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 494
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
M++L P+ ITY+ L+ LC+VR+ N+ +EM+ G+ N TY+ MI GL
Sbjct: 495 ICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGL 554
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
A G+I+EA GL G S+ ++ I GL A L ++
Sbjct: 555 AKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 604
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ ++M G G + YT++IRS K + D I +M G PD+
Sbjct: 246 DDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTY 305
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ V + K LF E+ G +PD +Y++ I+GL K ++ M+E G
Sbjct: 306 MDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGC 365
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
D YN ++ CK ++N+ +L++EMK KG + TY +IDGLA + EA
Sbjct: 366 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYM 425
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L EEA + G+ ++ I G + G + +A +++++ K ++P W LL ++
Sbjct: 426 LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC-LLDAL 484
Query: 428 SKLDFVNTSFI 438
K + +N + I
Sbjct: 485 VKAEEINEALI 495
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 13/248 (5%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRS----------LVKKEKVFDALGILNQMKSDGIK 238
E +Q M+K F YT +I L K ++ +A+ + Q++ +
Sbjct: 28 EAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKV 87
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P Y ++ G + +A L + G +P V YN + L K+ VE +++
Sbjct: 88 PCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRI 147
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M+ + P+V TYN L+ LC+ +LN E+ +M+ G+ N+ T +IMID L
Sbjct: 148 FEEMKR-DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCK 206
Query: 359 KGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ EAC + E ++ +CT +++ F I GL + G V A L ++M D PGA
Sbjct: 207 AQKLEEACSIF-EGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAI 265
Query: 418 VWEALLLS 425
V+ +L+ S
Sbjct: 266 VYTSLIRS 273
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K +A G+L + K+ G P ++ Y +L + + +A +F+E+
Sbjct: 93 YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM- 151
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
VP+V TYN+ I+ LC++ + A +++ ME G P+V+T N ++ LCK ++L
Sbjct: 152 KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE 211
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ + M K N T+S +IDGL G + +A L E+ L+ G + ++ I
Sbjct: 212 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLI 271
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
+ G ++ K+M SP
Sbjct: 272 RSFFKCGRKEDGHKIYKEMVHTGCSP 297
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF D ++ S+++ + + ++E MK+ G Y VI K KV
Sbjct: 329 GFIPDARSYSILIHGLVKAG--LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 386
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A +L +MK G P +V Y V++G+ + +A LF+E G+ +V Y+ I
Sbjct: 387 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 446
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G K ++ ++ + + G P+V T+N LL AL K E+N + MK
Sbjct: 447 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP 506
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N TYSI+I+GL +A +E GL + + I GL + G + +A L
Sbjct: 507 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 566
Query: 404 LKQMADKDVSPGARVWEALL--LSSVSK 429
+ P + + A++ LSS +K
Sbjct: 567 FSRFKANGGIPDSASYNAMIEGLSSANK 594
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 144/375 (38%), Gaps = 93/375 (24%)
Query: 129 AHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD 188
A+R ++V LF ++ + R +A N MI G+ GK D
Sbjct: 68 ANRLDEAVELFEQLEQNRKVPCAYA---YNTMIM-GYGSAGKF----------------D 107
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E G ++ K G ++ Y ++ L KK +V +AL I +MK D + P++ Y +++
Sbjct: 108 EAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILI 166
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE---- 304
+ + + A E+ D++ GL P+V T N+ I+ LCK +E + M++
Sbjct: 167 DMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCT 226
Query: 305 -------------------------------LGSKPDVITY------------------- 314
G P I Y
Sbjct: 227 PNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKI 286
Query: 315 ----------------NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
NT + + K E + R L +E+ G + + ++YSI+I GL
Sbjct: 287 YKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVK 346
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G E L +G + ++ I G C+ G V KA +LL++M K P
Sbjct: 347 AGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 406
Query: 419 WEALL--LSSVSKLD 431
+ +++ L+ + +LD
Sbjct: 407 YGSVIDGLAKIDRLD 421
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++E+ + G + + ++ +LVK E++ +AL MK P+ + Y+++
Sbjct: 456 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSIL 515
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ + KA + E+ LGL P+ TY I+GL K N+ + + + G
Sbjct: 516 INGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGG 575
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD +YN +++ L + L +E + KG ++ +T +++D L K + +E
Sbjct: 576 IPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL-HKAECLEQAA 634
Query: 368 LLEEALNKGLCTQSS 382
++ L + +Q +
Sbjct: 635 IVGAVLKETAKSQHA 649
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 7/287 (2%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
+ H + +N F+K + R GF ++ M G + + ++S C D
Sbjct: 227 NPHTYSVLMNGFFKQG---LQREGF--QMYENMKRSGIVPNAYAYNCLISEYCN--DGMV 279
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ EM++ G G++ Y +I L + +K +A+ +++++ G+ P+IV Y ++
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG A LF++L GL P + TYN I G K N+ + ++ MEE
Sbjct: 340 INGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P +TY L+ A ++ + E+ M+ G+V ++ TYS+++ GL G++ EA
Sbjct: 400 APSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASK 459
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + L S +++ I G C+ G +AL LL +M + P
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVP 506
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 113/229 (49%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ MK+ G Y +I V A + +M+ GI ++ Y +++ G+
Sbjct: 252 ENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRG 311
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ + +A +L ++ +GL P++ TYN+ ING C +++ +++ ++ G P ++TY
Sbjct: 312 KKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTY 371
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTL+ KV L +LVKEM+ + I + TY+I+ID A +AC +
Sbjct: 372 NTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEK 431
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + + GLC G +++A +L K + + + P + ++ ++
Sbjct: 432 SGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMI 480
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ M G T ++++ +C + E + V ++ K+G +V Y +
Sbjct: 282 AFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG--EAVKLVHKVNKVGLSPNIVTYNIL 339
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ A+ + NQ+KS G+ P +V Y ++ G E+ A +L E+ +
Sbjct: 340 INGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P TY + I+ + N+ E +M + ME+ G PDV TY+ LL LC + +
Sbjct: 400 APSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASK 459
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K + + N Y+ MI G +G A LL E + G+ + F TI LC
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLC 519
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWE 420
+ ++A LL QM + + P +++
Sbjct: 520 RDEKWKEAELLLGQMINSGLKPSVSLYK 547
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 129/266 (48%), Gaps = 5/266 (1%)
Query: 167 VDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
+D + +++ CE LL ++E G +V YT +I K V A
Sbjct: 156 LDAYSFGIMIKGCCEAGYFVKGFRLLAMLEE---FGLSPNVVIYTTLIDGCCKDGNVMLA 212
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ +M G+ P+ Y++++NG Q + ++++ + G+VP+ Y YN I+
Sbjct: 213 KNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISE 272
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
C V+ K+ A M E G V+TYN L+ LC+ ++ +LV ++ G+ N
Sbjct: 273 YCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPN 332
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ TY+I+I+G + A L + + GL ++ I G + + AL+L+K
Sbjct: 333 IVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392
Query: 406 QMADKDVSPGARVWEALLLSSVSKLD 431
+M ++ ++P ++V +L+ + ++L+
Sbjct: 393 EMEERCIAP-SKVTYTILIDAFARLN 417
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y V+ + V AL L+ M +G P + +L +I + KA +F+EL
Sbjct: 92 YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+V D Y++ + I G C+ G +++A +EE G P+V+ Y TL+ CK +
Sbjct: 152 S-KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ L +M G+V N TYS++++G +G E + E G+ + ++ I
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G+V KA ++ +M +K ++ G + L+
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFC------------- 166
LI +F ++V L +K+ N+VG + I+ N +IN GFC
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKV-----NKVGLSPNIVTYNILIN-GFCDVRKMDSAVRLFN 357
Query: 167 ---VDGKTCSLILSSVCEQRDLSSDELLG---FVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
G + +L+ + + L G V+EM++ V YT +I + +
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLN 417
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
A + + M+ G+ PD+ Y+++L+G+ V + +A +LF L + L P+ YN
Sbjct: 418 HTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYN 477
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
I+G CK+ + ++++ M + G P+V ++ + + LC+ + L+ +M
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINS 537
Query: 341 GIVLNLQTYSIMIDGLASKGDI 362
G+ ++ Y ++ KGD+
Sbjct: 538 GLKPSVSLYKMVHK---VKGDV 556
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 149/354 (42%), Gaps = 54/354 (15%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE-ILNCMINDG---------------- 164
LI+ Y QDS+ +F + + N + IL ++ G
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
C D T +++++ +C + L +Q+M+K G+ +V Y V+ KK +
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYL--MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLN----------GVIVQEDYVK--------------- 259
A+ +L+ MKS G+ D+ Y M+++ G ++ D K
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 306
Query: 260 ----------AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
A +L +E+L GL P+ T+N I+G + N + +KM ME G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
++Y LL LCK E + R MK G+ + TY+ MIDGL G + EA LL
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E G+ + I G C+ G + A E++ ++ +SP ++ L+
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++L +C+ + D GF MK+ G C G + YT +I L K + +A+ +LN+M
Sbjct: 372 GVLLDGLCKNAEF--DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
DGI PDIV Y+ ++NG + A+E+ + +GL P+ Y+ I C+ +
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ I++ M G D T+N L+ +LCK ++ E ++ M GI+ N ++ +
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G + G+ ++A + +E G + + GLC+ G +R+A + LK +
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 413 SPGARVWEALL 423
+ ++ LL
Sbjct: 610 AVDTVMYNTLL 620
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 150/355 (42%), Gaps = 44/355 (12%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
D + +N F K+ +F+ A EI+ + G +G S ++ + C L
Sbjct: 437 DIVTYSALINGFCKVGRFKT-----AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK- 490
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
E + + M G + ++ SL K KV +A + M SDGI P+ V + +
Sbjct: 491 -EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG + +KA +FDE+ +G P +TY + GLCK ++ K + + + +
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
D + YNTLL A+CK L + L EM + I+ + TY+ +I GL KG + A
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 368 LLEEALNKG---------LCTQSSMF---------------------------DETICGL 391
+EA +G C MF + I G
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ G + K +LL +M +++ P + +LL SK V+TSF+ ILN
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYN-ILLHGYSKRKDVSTSFLLYRSIILN 783
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 116/231 (50%), Gaps = 2/231 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ S+VK + L +M I PD+ + +++N + + + K+ L ++ G
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 223
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P + TYN ++ CK+ +A I+++ M+ G DV TYN L+ LC+ + +
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L+++M+ + I N TY+ +I+G +++G ++ A LL E L+ GL F+ I G
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
G ++AL++ M K ++P + LL L ++ D ++R+
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 38/343 (11%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
F+F L+ TY + ++ ++ R + ++EI M GF TC+ I
Sbjct: 106 SFVFGALMTTYRLCNSNPSVYDILIRV-YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 164
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L SV + + S + F++EM K C + + +I L + + ++ +M+
Sbjct: 165 LGSVVKSGEDVS--VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 222
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G P IV Y VL+ + + A EL D + G+ DV TYN+ I+ LC+ N + G
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 282
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ M + P+ +TYNTL+ ++ +L+ EM G+ N T++ +IDG
Sbjct: 283 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 342
Query: 356 LASKGDIIEAC------------------GLLEEALNK-----------------GLCTQ 380
S+G+ EA G+L + L K G+C
Sbjct: 343 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 402
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ G + +A+ LL +M+ + P + AL+
Sbjct: 403 RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +IR +++ + D+L I M G P + +L V+ + V E+L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ PDV T+N+ IN LC + + E ++ ME+ G P ++TYNT+L CK
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL+ MK KG+ ++ TY+++I L I + LL + + + ++ I
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
G G V A +LL +M +SP + AL+ +S+ +F
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 37/311 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R AIE+L+ M + G D T ++++ +C ++ LL +++M+K V
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL--LRDMRKRMIHPNEV 299
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + KV A +LN+M S G+ P+ V + +++G I + ++ +A ++F +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 268 LVLGLVPDVYTYNVYINGLCK---------------QNNVEAG----------------- 295
GL P +Y V ++GLCK +N V G
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 296 ---IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M + G PD++TY+ L+ CKV +E+V + G+ N YS +
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G + EA + E + +G F+ + LC+ G V +A E ++ M +
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 413 SPGARVWEALL 423
P ++ L+
Sbjct: 540 LPNTVSFDCLI 550
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%), Gaps = 1/237 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F ++M LG +V +I + K+ +L +M + P++ Y ++L+G
Sbjct: 706 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 765
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
++D + L+ +++ G++PD T + + G+C+ N +E G+K++ G + D
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 825
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+N L+ C E+N +LVK M GI L+ T M+ L E+ +L E
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+G+ +S + I GLC+ G ++ A + ++M + P V E+ ++ +++K
Sbjct: 886 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP-PNVAESAMVRALAK 941
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 42/305 (13%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFC 203
+ +V A E + CM +DG + + +++ S + L F EM K+G
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN----SGEGLKAFSVFDEMTKVGHH 575
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
Y ++++ L K + +A L + + D V Y +L + + KA L
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNV------------------------------- 292
F E++ ++PD YTY I+GLC++
Sbjct: 636 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695
Query: 293 -----EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+AGI M+ LG PD++T N ++ ++ ++ + +L+ EM + NL
Sbjct: 696 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 755
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I++ G + + D+ + L + G+ + G+C+ ++ L++LK
Sbjct: 756 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 815
Query: 408 ADKDV 412
+ V
Sbjct: 816 ICRGV 820
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + ++IL I G VD T ++++S C ++ + V+ M LG
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI--NWAFDLVKVMTSLGISLDKD 860
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
++ L + + ++ +L++M GI P+ Y ++NG+ D A + +E+
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + P + + L K + ++ M ++ P + ++ TL+ CK +
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 980
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL M G+ L+L +Y+++I GL +KGD+ A L EE G ++ +
Sbjct: 981 IEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040
Query: 388 ICGLCQR 394
I GL R
Sbjct: 1041 IRGLLAR 1047
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 3/248 (1%)
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
VD + +L+++C+ +L+ + + EM + YT++I L +K K A+
Sbjct: 611 VDTVMYNTLLTAMCKSGNLA--KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 227 GILNQMKSDG-IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++ G + P+ V YT ++G+ + +++ LG PD+ T N I+G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+ +E ++ M P++ TYN LL K ++++ L + + GI+ +
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
T ++ G+ + +L+ + +G+ F+ I C G + A +L+K
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 406 QMADKDVS 413
M +S
Sbjct: 849 VMTSLGIS 856
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 2/219 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD-IVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++ K++ V + + + +GI PD + C+++VL G+ ++
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL-GICESNMLEIGLKIL 812
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ G+ D YT+N+ I+ C + ++ M LG D T + ++ L +
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R ++ EM +GI + Y +I+GL GDI A + EE + +C +
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ L + G +A LL+ M + P + L+
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+DE ++ M K+ + +T ++ K V +AL + M + G+K D+V Y +
Sbjct: 945 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++ G+ + D A EL++E+ G + + TY I GL + +G +I
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1057
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 123/232 (53%), Gaps = 2/232 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ C+ R+L + L FV M K G + Y +I K + +A+G+L++M+S
Sbjct: 310 LVDGFCKARELVTARSL-FVH-MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+ PD+ YT+++NG+ +++ +A LF ++ + P TYN I+G CK+ N+E
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ + + M G +P++IT++TL+ C VR++ L EM KGIV ++ TY+ +ID
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+ ++ EA L + L G+ F + G + G + A++ ++
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 115/249 (46%), Gaps = 37/249 (14%)
Query: 211 NVIRSLVKKEKVFDALGILNQ-MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+++ LV++ + FD++ + Q M S G+ PD+ Y ++ Q Y K E+L DE+
Sbjct: 169 SILNGLVRRRR-FDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS 227
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN-------------- 315
LG+ P+VY Y +YI LC+ N +E KM M++ G P++ TY+
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 316 ---------------------TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
TL+ CK REL R L M G+ NL Y+ +I
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G G+++EA GLL E + L + I GLC V +A L ++M ++ + P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 415 GARVWEALL 423
+ + +L+
Sbjct: 408 SSATYNSLI 416
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
RD +E + MKK G + Y+ +I K V A G+ ++ + P++V
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+ +++G + V A LF ++ G+ P++Y YN I+G CK N+ + +++ M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 303 EELGSKPDVITYNTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
E L PDV TY L+ LC +V E NR L ++MK + I + TY+ +I G +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANR---LFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
++ +A L E G+ F I G C ++ A+ L +M K + P +
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 420 EALL 423
AL+
Sbjct: 483 TALI 486
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 20/297 (6%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+F L+ + A + +LF + KF ++ + + NC+I+ G C G
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDP---NLYVYNCLIH-GHCKSGNML----- 356
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
E +G + EM+ L + YT +I L +++V +A + +MK++ I
Sbjct: 357 -----------EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P Y +++G + + +A +L E+ G+ P++ T++ I+G C +++A +
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M G PDV+TY L+ A K + L +M GI N T++ ++DG
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+G + A +E + C F I GLCQ G + +A M ++P
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI+ G D ++ +Q S E L + EM LG + YT I L +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL--LDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A + MK G+ P++ Y+ +++G + +A L+ E+LV L+P+V +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
++G CK + + M + G P++ YN L+ CK + L+ EM+
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ ++ TY+I+I+GL + + EA L ++ N+ + S+ ++ I G C+ + +
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL+L +M V P + L+
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLI 451
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R N++ A ++ M G + T S ++ C+ ++ + G +E+
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVR--QAYGLYKEILVAELLPN 303
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ K ++ A + M G+ P++ Y +++G + ++A L
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ L L PDV+TY + INGLC ++ V ++ M+ P TYN+L+ CK
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + +L EM G+ N+ T+S +IDG + DI A GL E KG+ +
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + +++AL L M + + P + L+
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 5/237 (2%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S L +++++ F G+ ++ +I ++ +AL + +MK PD
Sbjct: 115 SHRLFNALEDIQSPKFSIGV--FSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLS 169
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+LNG++ + + + ++ GLVPDV+ Y V KQ K++ M LG
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KP+V Y + LC+ ++ ++ + MK G++ NL TYS MIDG G++ +A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL +E L L +F + G C+ + A L M V P V+ L+
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLI 346
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 149/303 (49%), Gaps = 7/303 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR--DLSSDELLGFVQEMKKLGFC 203
R+ R+ ++ G+ V+ S +L +C+ + D ++D LL M + G
Sbjct: 102 RMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL---LRMSEFGCP 158
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y VI ++ +V A + +M GI P++V YT V++G+ + +A+ +
Sbjct: 159 PDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGV 218
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
F +++ G+ PD TYN I+G + ++M+ M G +PD ITY LL LCK
Sbjct: 219 FQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCK 278
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
R M KGI ++ Y+I++ G A+KG + E L+ + G+ +
Sbjct: 279 NGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRI 338
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQ 443
F+ C ++ ++ +A+ + +M + +SP + A L+ ++ KL V+ + ++ +Q
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGA-LIDALCKLGRVDDAVLQF-NQ 396
Query: 444 ILN 446
++N
Sbjct: 397 MIN 399
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 142/282 (50%), Gaps = 3/282 (1%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
L+ M+ +G + + +++ + ++ + +E + +M++ G +V + +I +
Sbjct: 323 FLDLMVGNGVSPNRRIFNIMFCAYAKKAMI--EEAMHIFNKMRQQGLSPDVVSFGALIDA 380
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L K +V DA+ NQM ++G+ P+I ++ ++ G+ + KAEELF E+L G+ D
Sbjct: 381 LCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVD 440
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+N + LC + V ++I M +G +P+VI+YNTL+ C ++ +L+
Sbjct: 441 AVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLD 500
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M G+ N TY+I++ G + +A L E L KG+ + ++ + GL Q G
Sbjct: 501 VMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTG 560
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+A EL M + + ++L+ + K +FV+ +F
Sbjct: 561 RFSEANELYLNMINSRTKCDIYTYN-IILNGLCKNNFVDEAF 601
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 2/250 (0%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM G +V YT VI L K + V A G+ QM G+KPD Y +++G +
Sbjct: 186 EMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTG 245
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ + ++ +E+ GL PD TY + ++ LCK M G KPDV Y
Sbjct: 246 KWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYA 305
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
LL L+ + + M G+ N + ++IM A K I EA + + +
Sbjct: 306 ILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQ 365
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFV 433
GL F I LC+ G V A+ QM ++ V+P V+ +L+ L +V K +
Sbjct: 366 GLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKA 425
Query: 434 NTSFIRLVDQ 443
F ++DQ
Sbjct: 426 EELFFEVLDQ 435
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E++ ++EM G + Y ++ L K + +A + M GIKPD+ Y ++L
Sbjct: 249 EVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILL 308
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G + + D ++ G+ P+ +N+ K+ +E + + M + G
Sbjct: 309 HGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLS 368
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV+++ L+ ALCK+ ++ +M +G+ N+ +S ++ GL + G +A L
Sbjct: 369 PDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEEL 428
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E L++G+C + F+ +C LC G V +A L+ M V P + L+
Sbjct: 429 FFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLV 483
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT ++R K +V DA + +M G+ P + Y +L+G+ + +A EL+ ++
Sbjct: 514 YTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMI 573
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
D+YTYN+ +NGLCK N V+ KM + + D +T+N ++ AL K
Sbjct: 574 NSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKE 633
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L + G+V ++ TY ++ + L +G + E GL G S M + +
Sbjct: 634 DAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALV 693
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
L RG + +A L ++ +K+ S A ++L+S S+ ++
Sbjct: 694 RRLLHRGDISRAGVYLYKLDEKNFSLEAST-TSMLISLYSRGEY 736
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A+ N MIN+G + S ++ +C E L F E+ G C
Sbjct: 383 KLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF--EVLDQGICVD 440
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V + ++ +L + +V +A +++ M G++P+++ Y ++ G + +A +L D
Sbjct: 441 AVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLD 500
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ GL P+ +TY + + G CK V+ + M G P V TYNT+L L +
Sbjct: 501 VMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTG 560
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ EL M ++ TY+I+++GL + EA + +K S F+
Sbjct: 561 RFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFN 620
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I L + G A++L ++ + P
Sbjct: 621 IMIGALLKGGRKEDAMDLFATISAYGLVP 649
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 23/312 (7%)
Query: 114 TPE-FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
TP F+F L+ +++ + LF+++ ++ G CVD
Sbjct: 403 TPNIFVFSSLVYGLCTVGKWEKAEELFFEV------------------LDQGICVDAVFF 444
Query: 173 SLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
+ ++ ++C E R + + L+ M ++G ++ Y ++ ++ +A +L+
Sbjct: 445 NTLMCNLCNEGRVMEAQRLIDL---MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDV 501
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M S+G+KP+ YT++L G A LF E+L+ G+ P V TYN ++GL +
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
++ M +K D+ TYN +L LCK ++ ++ + + K L+ T++I
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNI 621
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
MI L G +A L GL + L + G + + L M
Sbjct: 622 MIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681
Query: 412 VSPGARVWEALL 423
+P + + AL+
Sbjct: 682 TAPNSHMLNALV 693
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ TY++ I C+ +E G + + G + +VI + LL+ LC + ++
Sbjct: 86 VAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEAT 145
Query: 332 E-LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ L+ M G ++ Y+ +I+G +G + +A L E +++G+ + I G
Sbjct: 146 DILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDG 205
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
LC+ +V +A + +QM D+ V P + L+ +S
Sbjct: 206 LCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLS 243
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 137/275 (49%), Gaps = 2/275 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ IL N+G +D S ++ +C++ L ++ + + +MKK + ++
Sbjct: 413 ALRILEEAENEGADLDTFAYSSMVHGLCKKGML--EQAVELIHQMKKNRRKLNSHVFNSL 470
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I V+ K+ +A+ +L +MKS P +V Y ++NG+ E + A E+L GL
Sbjct: 471 INGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGL 530
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ TY++ I+GLC+ V+ + + KPD+ +N ++ LC ++++ E
Sbjct: 531 KPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALE 590
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M+ V +L T++ +++GL GD +EA + + L GL ++ T GLC
Sbjct: 591 IFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLC 650
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
V A+E L D+ + P A W L+ + V
Sbjct: 651 SCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVV 685
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 152/334 (45%), Gaps = 21/334 (6%)
Query: 79 PPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNL 138
PP +H +++ L + + ++D + + + E + + IK YA ++NL
Sbjct: 42 PPFVFHHILRRLMDPKLVVHVGRIVD-LMRAQRCTCSEDVALSAIKAYAKCSMPDQALNL 100
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
F + ++I C N G ++ + +L++ E EL F +
Sbjct: 101 FQNM-----------VDIFGC--NPGI----RSFNSMLNAFIESNQWREAEL--FFTYFQ 141
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
G + Y +I+ KK + G+L M +G+ PDI+ Y ++N + + +
Sbjct: 142 TAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLL 201
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNN-VEAGIKMIACMEELGSKPDVITYNTL 317
A ELFDE+ V G+ PDV YN+ I+G ++ + V+A + E P V TYN +
Sbjct: 202 DAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIM 261
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LCK+ +L+ E+ MK +L T+S MI GL+ G+ A + +E + GL
Sbjct: 262 INGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGL 321
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
++ + GL + G + K EL M+ +
Sbjct: 322 SPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNN 355
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 13/219 (5%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G P I + +LN I + +AE F G+ P++ TYN+ I CK+ E G
Sbjct: 109 GCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKG 168
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ M E G PD+++Y TL+ AL K L EL EM +G+ ++ Y+I+IDG
Sbjct: 169 KGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDG 228
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDET------ICGLCQRGLVRKALELLKQMAD 409
KGD ++A + K L T+SS++ I GLC+ G + +++E+ +M
Sbjct: 229 FLRKGDFVKA-----NEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKK 283
Query: 410 KDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILN 446
+ SP + +++ LS + F +++ L+
Sbjct: 284 NEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLS 322
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 162/392 (41%), Gaps = 62/392 (15%)
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-F 117
K I LL S+Y P E Y+ +I L + + + + + ++K E ++P+ F
Sbjct: 237 KANEIWKRLLTESSVY---PSVETYNIMINGLCKLGKLDESMEMWNRMKKNE--KSPDLF 291
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
F +I + A F + +F + MI G D +T + +LS
Sbjct: 292 TFSSMIHGLSKAGNFNAAEKVFQE------------------MIESGLSPDVRTYNAMLS 333
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+ L+ L V C +V Y +I+ L+ +KV A+ + G+
Sbjct: 334 GLFRTGKLNKCFELWNVMSKNN---CCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGL 390
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
K D Y +++NG+ KA + +E G D + Y+ ++GLCK+ +E ++
Sbjct: 391 KADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVE 450
Query: 298 MI--------------------------------ACMEELGSK---PDVITYNTLLQALC 322
+I + + E+ SK P V++YNT++ LC
Sbjct: 451 LIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLC 510
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K + +KEM +G+ ++ TYS++IDGL + A L + +NK L
Sbjct: 511 KAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQ 570
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSP 414
M + I GLC V ALE+ QM + P
Sbjct: 571 MHNIIIHGLCTAQKVDVALEIFTQMRQVNCVP 602
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 4/230 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A E+ + F VD T ++IL+ C + + + L ++EM + G +
Sbjct: 176 RVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIK--RTPKALEVLKEMVERGINPNLTT 232
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +++ + ++ A +MK + D+V YT V++G V + +A +FDE++
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G++P V TYN I LCK++NVE + M M G +P+V TYN L++ L E +
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
R EL++ M+ +G N QTY++MI + ++ +A GL E+ + G C
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK-MGSGDC 401
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 107/222 (48%), Gaps = 2/222 (0%)
Query: 203 CF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
CF + + ++ L K ++V A + ++ D V Y ++LNG + + KA
Sbjct: 157 CFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKAL 215
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
E+ E++ G+ P++ TYN + G + + + M++ + DV+TY T++
Sbjct: 216 EVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGF 275
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
E+ R R + EM +G++ ++ TY+ MI L K ++ A + EE + +G
Sbjct: 276 GVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNV 335
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I GL G + EL+++M ++ P + + ++
Sbjct: 336 TTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 1/196 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++++M+S I P + +V KA +LF + G D+ ++N ++ LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K VE ++ + S D +TYN +L C ++ + E++KEM +GI NL
Sbjct: 173 KSKRVEKAYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ M+ G G I A E + + + G G +++A + +M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 408 ADKDVSPGARVWEALL 423
+ V P + A++
Sbjct: 292 IREGVLPSVATYNAMI 307
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 157/398 (39%), Gaps = 43/398 (10%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
S LH +C P Y ++ + Q ++ + P +F L+ +
Sbjct: 295 SFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPS-LFNSLVHS 353
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC-SLILSSVCEQRD 184
Y +A + +A ++LN M G C G ++ + S+C +
Sbjct: 354 YCNARDYP------------------YAYKLLNRMAGCG-CPPGYVVYNIFIGSICSGEE 394
Query: 185 LSSDELLGFVQ----EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
L S +LL + EM V+ N R L K A I+ M G PD
Sbjct: 395 LPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPD 454
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
Y+ V+ + KA LF E+ +G++PDVYTY + I+ CK +E
Sbjct: 455 TSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFD 514
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
ME +G P V+TY LL A K +++ + ++ M G N TYS ++DGL G
Sbjct: 515 EMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAG 574
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDET----------------ICGLCQRGLVRKALELL 404
+ +AC + + + S + E I GLC+ V A ELL
Sbjct: 575 ESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELL 634
Query: 405 KQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
M+ P +++AL+ V KLD F R+
Sbjct: 635 DVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRM 672
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 6/248 (2%)
Query: 163 DGFCVDG---KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
DG C G K C + + ++ SD + + +V Y +I L K
Sbjct: 568 DGLCKAGESQKACEVYAKMIGTSDNVGSDF---YFEGEHTDSIAPNVVTYGALIDGLCKA 624
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
KV DA +L+ M S+G +P+ + Y +++G A+E+F + G +P V+TY
Sbjct: 625 HKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTY 684
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+ + K ++ IK+++ M E P+V+TY ++ LC++ E + +L+ M+
Sbjct: 685 TSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEK 744
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G N+ TY+ +IDGL G + + L + + +G + I C GL+ +
Sbjct: 745 RGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDE 804
Query: 400 ALELLKQM 407
A LL +M
Sbjct: 805 AHSLLSEM 812
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 143/344 (41%), Gaps = 55/344 (15%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +I+ M+ GF D T S +++ +CE + LL QEMK +G + YT +
Sbjct: 439 AFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLL--FQEMKSVGVIPDVYTYTIL 496
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG- 271
I S K + A ++M+S G P +V YT +L+ + + +A ++F ++ G
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556
Query: 272 --------------------------------------------------LVPDVYTYNV 281
+ P+V TY
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGA 616
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+GLCK + V +++ M G +P+ I Y+ L+ CKV +L+ +E+ M G
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCG 676
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ + TY+ +ID + + A +L + L + I GLC+ G +KAL
Sbjct: 677 YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736
Query: 402 ELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+LL M + +P + +L+ L K+D F +++ Q
Sbjct: 737 KLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQ 780
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 163/372 (43%), Gaps = 41/372 (11%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTL---AENSQFCDISSVL----DH 105
+ +Q+P+ S + H C P Y ++ L E+ + C++ + + D+
Sbjct: 537 KTKQVPQA----SDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDN 592
Query: 106 IEKRENFE-------TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL 157
+ FE P + + LI AH+ D A E+L
Sbjct: 593 VGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVD------------------AQELL 634
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
+ M ++G + ++ C+ L + + + F M K G+ + YT++I ++
Sbjct: 635 DVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFF--RMSKCGYLPTVHTYTSLIDAMF 692
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K ++ A+ +L+QM P++V YT +++G+ + KA +L + G P+V
Sbjct: 693 KDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVV 752
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TY I+GL K V+ +++ M G P+ +TY L+ C L+ L+ EM
Sbjct: 753 TYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 812
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
K +Q Y ++ G + K I + GLLEE + G+ + + ++ I + G +
Sbjct: 813 KQTYWPKYVQGYCSVVQGFSKK--FIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRL 870
Query: 398 RKALELLKQMAD 409
KALEL K+M +
Sbjct: 871 EKALELHKEMME 882
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%)
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
+D I P++V Y +++G+ V A+EL D + G P+ Y+ I+G CK ++
Sbjct: 604 TDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLD 663
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
++ M + G P V TY +L+ A+ K R L+ +++ +M N+ TY+ MI
Sbjct: 664 NAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMI 723
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DGL G+ +A LL +G + I GL + G V +L+L QM + +
Sbjct: 724 DGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCA 783
Query: 414 PGARVWEALL 423
P + L+
Sbjct: 784 PNYVTYRVLI 793
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 12/276 (4%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GFC D T ++C++ S D L+ +E KL V T +I L++
Sbjct: 237 GFCTDKFTVGCFAQALCKEGRWS-DALVMIEREDFKLD----TVLCTQMISGLMEASLFD 291
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A+ L++M+ + P++V Y +L G + ++ + + ++ G P+ +N +
Sbjct: 292 EAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLV 351
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR------LRELVKEM 337
+ C + K++ M G P + YN + ++C EL ++ +EM
Sbjct: 352 HSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEM 411
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
VLN + L G +A +++ + KG +S + + I LC+ V
Sbjct: 412 LASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKV 471
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
KA L ++M V P + +L+ S K+ +
Sbjct: 472 EKAFLLFQEMKSVGVIPDVYTY-TILIDSFCKVGLI 506
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 147/361 (40%), Gaps = 35/361 (9%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y +I L + + D +LD + E I+ LI + + ++
Sbjct: 609 PNVVTYGALIDGLCKAHKVVDAQELLD-VMSSNGCEPNHIIYDALIDGFCKVGKLDNAQE 667
Query: 138 LFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+F+++ K F+ R+ AI++L+ M+ + T + ++ +C
Sbjct: 668 VFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLC 727
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
R + L + M+K G +V YT++I L K KV +L + QM + G P+
Sbjct: 728 --RIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPN 785
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK--QNNVEAGIKM 298
V Y +++N +A L E+ Y + Y+ G C Q + I
Sbjct: 786 YVTYRVLINHCCAAGLLDEAHSLLSEM------KQTY-WPKYVQGYCSVVQGFSKKFIAS 838
Query: 299 IACMEELGSKPDVI---TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL---QTYSIM 352
+ +EEL S V Y L+ + K L + EL KEM LN+ TY+ +
Sbjct: 839 LGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSL 898
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I L + +A L E KG+ + S F I GL + +AL+L M D+ V
Sbjct: 899 IQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958
Query: 413 S 413
+
Sbjct: 959 N 959
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 88/233 (37%), Gaps = 3/233 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++R + AL L ++K G +P Y ++ + + E+ LG
Sbjct: 178 IVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELG 237
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
D +T + LCK+ + MI E K D + ++ L + +
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSDALVMI---EREDFKLDTVLCTQMISGLMEASLFDEAI 294
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ M+ + N+ TY ++ G K + ++ +N+G S+F+ +
Sbjct: 295 SFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSY 354
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
C A +LL +MA PG V+ + S S + + + L +++
Sbjct: 355 CNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKV 407
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 11/173 (6%)
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
NV + C+ ++ + +++ G +P TYN L+Q L +++ + KEM
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 235
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEE---ALNKGLCTQSSMFDETICGLCQRGL 396
G + T L +G +A ++E L+ LCTQ I GL + L
Sbjct: 236 LGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQ------MISGLMEASL 289
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+A+ L +M P + LL + K R++ ++N C
Sbjct: 290 FDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCK--RIISMMMNEGC 340
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 158/355 (44%), Gaps = 22/355 (6%)
Query: 115 PEFI-FIDLIKTYADAHRFQDSVNLFYKIPK--------FRINRVGF-----AIEILNC- 159
P+ + + LIK Y D +R +D++ L +P +GF IE + C
Sbjct: 299 PDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCL 358
Query: 160 ---MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSL 216
M+ D + + L + + +D+ L F++E + GF V Y+ ++ S
Sbjct: 359 MEKMVQDSNLIPDQVTYNTLIHMLSKHG-HADDALAFLKEAEDKGFHIDKVGYSAIVHSF 417
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
+K ++ +A ++ M S PD+V YT +++G +A+++ ++ G P+
Sbjct: 418 CQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNT 477
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
+Y +NGLC +MI EE P+ ITY ++ + +L+ +L +E
Sbjct: 478 VSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTRE 537
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M KG +++I L ++EA LEE LNKG F I G CQ G
Sbjct: 538 MVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGD 597
Query: 397 VRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILN-TP 448
+ AL +L+ M + P A + AL L +LD ++++ + L+ TP
Sbjct: 598 MEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTP 652
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 170/405 (41%), Gaps = 43/405 (10%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C P +Y+ V+ L + + + +++ + + N + + LI + H D
Sbjct: 332 CPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSK-HGHADD 390
Query: 136 VNLFYKIPK---FRINRVGFAIEILNCMINDGFCVDGK---------------------T 171
F K + F I++VG++ I FC G+ T
Sbjct: 391 ALAFLKEAEDKGFHIDKVGYS------AIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVT 444
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
+ I+ C + DE +Q+M K G V YT ++ L K +A ++N
Sbjct: 445 YTAIVDGFCRLGRI--DEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINV 502
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK-QN 290
+ P+ + Y +V++G + +A +L E++ G P N+ I LC+ Q
Sbjct: 503 SEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQK 562
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
VEA + C+ + G +V+ + T++ C++ ++ ++++M + TY+
Sbjct: 563 VVEAKKYLEECLNK-GCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYT 621
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+ D L KG + EA L+ + L+KGL F I CQ G V L LL +M +
Sbjct: 622 ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR 681
Query: 411 DVSPGARVWEALLLSSVSKL-DFVNTSFI-RLVDQILNTPCKMEG 453
P ++ + + KL DF N +L+ ++L T K++
Sbjct: 682 --KPFRTIYNHV----IEKLCDFGNLEEAEKLLGKVLRTASKLDA 720
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 9/232 (3%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M+K G + I LVK K+ AL L +M+ GIKPDIV Y ++ G
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK-----PDV 311
A EL L G PD +Y + LCK+ +E + C+ E + PD
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIE----QVKCLMEKMVQDSNLIPDQ 372
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TYNTL+ L K + +KE + KG ++ YS ++ KG + EA L+ +
Sbjct: 373 VTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVID 432
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + + G C+ G + +A ++L+QM P + ALL
Sbjct: 433 MYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALL 484
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 127/299 (42%), Gaps = 23/299 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+L + C+P +Y ++ L + + + +++ E E++ TP I ++
Sbjct: 464 MLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSE--EHWWTPNAITYGVV--- 518
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
H F+ R ++ A ++ M+ GF +L++ S+C+ + +
Sbjct: 519 --MHGFR------------REGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVV 564
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E +++E G +V++T VI + + AL +L M PD V YT
Sbjct: 565 --EAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTA 622
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ + + + +A EL ++L GL P T+ I+ C+ V+ + ++ M +
Sbjct: 623 LFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRM--VK 680
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
KP YN +++ LC L +L+ ++ L+ T ++++ KG + A
Sbjct: 681 RKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSA 739
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM++ G +V Y +I L ++ +V +A ++ +MK DG+ P+++ Y +++G
Sbjct: 294 EMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIG 353
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ KA LF+++ G P + TYN+ I G + N M+ ME G P +TY
Sbjct: 354 NLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYT 413
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ AL + + + ++ M+ G+V ++ Y ++I GL GD+ EA L +
Sbjct: 414 ILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEM 473
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
L +++ I G C+ G +AL LLK+M + + P + +
Sbjct: 474 HLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 519
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 3/204 (1%)
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+K F+ LG QM+ G+ P++V YT +++G D + ++LF ++ L +V + YTY
Sbjct: 181 DKGFEVLG---QMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTY 237
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
V ING K + GI++ M+ G P+V TYN+++ C +LN EL EM+
Sbjct: 238 TVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRE 297
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ N+ TY+ +I GL + ++EA L+ GL ++ I G C G + K
Sbjct: 298 RGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDK 357
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L QM SP + L+
Sbjct: 358 ASSLFNQMKSSGQSPSLATYNILI 381
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M G + T + ++ +C++R + E L + MK+ G ++ Y +
Sbjct: 288 AFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERL--MCRMKRDGLSPNLISYNTL 345
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + A + NQMKS G P + Y +++ G ++ ++ E+ GL
Sbjct: 346 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGL 405
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P TY + ++ L + +N+E ++ + ME+ G D+ Y L+ LC V ++ +
Sbjct: 406 SPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASK 465
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K + + N Y+ MI G +G A LL+E G+ + ++ TI LC
Sbjct: 466 LFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILC 525
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
+ +A LLK M + + P +W +SK F N
Sbjct: 526 KDEKWTEAEVLLKDMIELGLKPSISIWNM-----ISKARFDN 562
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I + V+ + AL NQM G+ P + +L +I + KA +F+E G
Sbjct: 101 IINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE--TKG 158
Query: 272 LVP-DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
V DVY++ + I G C+ ++ G +++ MEE+G P+V+ Y TL+ CK ++ R
Sbjct: 159 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG 218
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
++L +M +V N TY+++I+G G + L E+ G+ ++ IC
Sbjct: 219 KQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 278
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G + A EL +M ++ V+ + L+
Sbjct: 279 CCNDGKLNNAFELFDEMRERGVACNVVTYNTLI 311
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
++ L + +M G G + N++ L+K A + N+ K + +K D+ + ++
Sbjct: 112 EQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIM 170
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G K E+ ++ +GL P+V Y I+G CK ++E G ++ M EL
Sbjct: 171 IKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDV 230
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ TY L+ K+ EL ++MK GIV N+ TY+ MI + G + A
Sbjct: 231 VANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFE 290
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
L +E +G+ ++ I GLCQ V +A L+ +M +SP + L+
Sbjct: 291 LFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYC 350
Query: 426 SVSKLDFVNTSF 437
S+ LD ++ F
Sbjct: 351 SIGNLDKASSLF 362
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 4/230 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A E+ + F VD T ++IL+ C + + + L ++EM + G +
Sbjct: 170 RVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIK--RTPKTLEVLKEMVERGINPNLTT 226
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +++ + ++ A +MK + D+V YT V++G V + +A +FDE++
Sbjct: 227 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 286
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G++P V TYN I LCK++NVE + M M G +P+V TYN L++ L E +
Sbjct: 287 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 346
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
R EL++ M+ +G N QTY++MI + ++ +A GL E+ + G C
Sbjct: 347 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK-MGSGDC 395
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 106/222 (47%), Gaps = 2/222 (0%)
Query: 203 CF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
CF + + ++ L K ++V A + ++ D V Y ++LNG + + K
Sbjct: 151 CFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKTL 209
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
E+ E++ G+ P++ TYN + G + + + M++ + DV+TY T++
Sbjct: 210 EVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGF 269
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
E+ R R + EM +G++ ++ TY+ MI L K ++ A + EE + +G
Sbjct: 270 GVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNV 329
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I GL G + EL+++M ++ P + + ++
Sbjct: 330 TTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 371
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 1/196 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++++M+S I P + +V KA +LF + G D+ ++N ++ LC
Sbjct: 107 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 166
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K VE ++ + S D +TYN +L C ++ + E++KEM +GI NL
Sbjct: 167 KSKRVEKAYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLT 225
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ M+ G G I A E + + + G G +++A + +M
Sbjct: 226 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 285
Query: 408 ADKDVSPGARVWEALL 423
+ V P + A++
Sbjct: 286 IREGVLPSVATYNAMI 301
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 127/256 (49%), Gaps = 3/256 (1%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D +T S+++ + R+ E G E+++ G Y ++I K+ V A
Sbjct: 590 DVQTYSVLIHGL--SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 647
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +M GI PDIV Y ++++G+ + +A+ LFD++ GL P+ TY ++G C
Sbjct: 648 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 707
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K N A +++ M G PD YN +L CK + + +L +EM KG +
Sbjct: 708 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV- 766
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+++ +I+G G + EA LLEE + K + I C+ G++ +A L +M
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826
Query: 408 ADKDVSPGARVWEALL 423
+++V P A+ + +LL
Sbjct: 827 QERNVMPTAKTYTSLL 842
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + A E+L+ M T S+I++ +C +L + ++EM G
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI--LREMVMNGLKPN 450
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT ++ + K+ +V ++ IL +M+ GI PD+ CY ++ G + +A
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 510
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L L P+ +TY +I+G K +E + M G P+V Y L++ CK
Sbjct: 511 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEG 570
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + + + + ++ ++QTYS++I GL+ G + EA G+ E KGL + ++
Sbjct: 571 NVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYN 630
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C++G V KA +LL++M K ++P + L+
Sbjct: 631 SLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 668
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 116/221 (52%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ EM G + YT +I K+ V +A + + S + D+ Y+++++G+
Sbjct: 543 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS 602
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A +F EL GL+P+ +TYN I+G CKQ NV+ +++ M G PD++
Sbjct: 603 RNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIV 662
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYN L+ LCK E+ R + L +++ +G+ N TY+ M+DG + A LLEE
Sbjct: 663 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 722
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L +G+ + +++ + C+ KAL+L ++M +K +
Sbjct: 723 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA 763
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 149/307 (48%), Gaps = 3/307 (0%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+ + ++I + +D+ + ++ + + + AIE+ M++ G D T +++
Sbjct: 225 YTYTNMISAHCKVGNVKDAKRVLLEMGE-KARLLDEAIELKRSMVDKGLVPDLYTYDILI 283
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ C ++ +L+ + EM +G + Y +I +++ + A I ++M + G
Sbjct: 284 NGFCMEKRSREAKLM--LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 341
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I+ +++ + +LNGV KA E+ E++ G+ PD TY++ I G C+ N+
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 401
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ M++ P V+TY+ ++ LC+ L +++EM G+ N Y+ ++
Sbjct: 402 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 461
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
A +G + E+ +LE +G+ ++ I G C+ + +A L +M ++ + P A
Sbjct: 462 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521
Query: 417 RVWEALL 423
+ A +
Sbjct: 522 HTYGAFI 528
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 125/238 (52%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + + M G + Y +I +++ +A +L +M G+KP+ + Y +
Sbjct: 258 DEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNAL 317
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G + Q D +A + DE++ G+ ++ +N +NG+CK +E ++++ M E G
Sbjct: 318 IDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV 377
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD TY+ L++ C+ + + R EL+ EMK + + + TYS++I+GL G++
Sbjct: 378 EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNA 437
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+L E + GL + ++ + + G V ++ +L++M ++ + P + +L++
Sbjct: 438 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIG 495
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%)
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
N+M S G+ P++ YT ++ G + + +A +F +L ++ DV TY+V I+GL +
Sbjct: 544 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 603
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ + + ++E G P+ TYN+L+ CK +++ +L++EM KGI ++ T
Sbjct: 604 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 663
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+I+IDGL G+I A L ++ +GL + + G C+ A +LL++M
Sbjct: 664 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 723
Query: 409 DKDVSPGARVWEALL 423
+ V P A ++ +L
Sbjct: 724 LRGVPPDAFIYNVIL 738
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 37/299 (12%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI+ G + T + ++ Q D+ ++ EM G ++ + ++ + K
Sbjct: 302 MIDVGLKPEPITYNALIDGFMRQGDI--EQAFRIKDEMVACGIEANLIIWNTLLNGVCKA 359
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ AL I+ +M G++PD Y++++ G ++ +A EL DE+ L P V TY
Sbjct: 360 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 419
Query: 280 NVYINGLCKQNNVEA-----------GIK------------------------MIACMEE 304
+V INGLC+ N++ G+K ++ M E
Sbjct: 420 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 479
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PDV YN+L+ CK + + R + EM + + N TY IDG + G++
Sbjct: 480 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 539
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A E L+ G+ ++ I G C+ G V +A + + + + V + + L+
Sbjct: 540 ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 598
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A I + + G + T + ++S C+Q ++ D+ ++EM G
Sbjct: 603 RNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV--DKASQLLEEMCIKGINPD 660
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I L K ++ A + + ++ G+ P+ V Y +++G ++ A +L +
Sbjct: 661 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 720
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L+ G+ PD + YNV +N CK+ E + + M E G +++NTL++ CK
Sbjct: 721 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSG 779
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L L++EM K + N TY+ +ID G + EA L E + + + +
Sbjct: 780 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 839
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
+ G G + + L ++M K + P
Sbjct: 840 SLLHGYHNIGNMSEVSALFEEMVAKGIEP 868
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 3/251 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L M G D T ++++ +C+ ++ + L +++ G V Y +
Sbjct: 645 ASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNL--FDDIEGRGLTPNCVTYAAM 702
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K + A +L +M G+ PD Y ++LN +E + KA +LF E+L G
Sbjct: 703 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF 762
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
V ++N I G CK ++ ++ M E P+ +TY +L+ CK + +
Sbjct: 763 ASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKR 821
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM+ + ++ +TY+ ++ G + G++ E L EE + KG+ + I C
Sbjct: 822 LWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYC 881
Query: 393 QRGLVRKALEL 403
+ G V +A +L
Sbjct: 882 REGNVMEACKL 892
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 17/179 (9%)
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNV-----------------EAGIKMIACMEE 304
++FD + ++PDVYTY I+ CK NV + I++ M +
Sbjct: 210 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVD 269
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD+ TY+ L+ C + + ++ EM G+ TY+ +IDG +GDI +
Sbjct: 270 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 329
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A + +E + G+ +++ + G+C+ G + KALE++++M +K V P ++ + L+
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 388
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 156/327 (47%), Gaps = 28/327 (8%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK-------- 170
+ +I Y R D+V F ++ + N +IN FC GK
Sbjct: 171 YNSMIDGYGKVGRLDDTVYFFEEMKSMSCEP---DVITYNSLIN-CFCKSGKLPKGLEFY 226
Query: 171 -------------TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
+ S ++ + C++ + + + F +M+++G YT+++ +
Sbjct: 227 REMKQSGLKPNVVSYSTLVDAFCKEDMMQ--QAIKFYVDMRRVGHVPNEFTYTSLVDANC 284
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K + DA + N+M G++ ++V YT +++G+ E +AE+LF +++ G++P++
Sbjct: 285 KIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLA 344
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
+YN I+G K N++ ++++ ++ G +PD++ Y T + LC + ++ + ++ EM
Sbjct: 345 SYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEM 404
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ GI N Y+ ++D G+ E LLEE F I GLC+ LV
Sbjct: 405 QENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLV 464
Query: 398 RKALELLKQMA-DKDVSPGARVWEALL 423
KA++ +M+ D + P A V+ A++
Sbjct: 465 SKAIDYFGRMSNDFGLQPNAAVYTAMI 491
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 149/346 (43%), Gaps = 28/346 (8%)
Query: 97 CDISSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLFYKIPKFRI-------- 147
CD V D + N P F +F L D +++ F K+ +FR+
Sbjct: 46 CD---VFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCN 102
Query: 148 ---------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
+ MI G T ++++ + ++ D+ + G +EMK
Sbjct: 103 GLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAAR--GLFEEMK 160
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
G V Y ++I K ++ D + +MKS +PD++ Y ++N
Sbjct: 161 FRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLP 220
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
K E + E+ GL P+V +Y+ ++ CK++ ++ IK M +G P+ TY +L+
Sbjct: 221 KGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLV 280
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
A CK+ L+ L EM G+ N+ TY+ +IDGL + EA L + + G+
Sbjct: 281 DANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVI 340
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP-----GARVW 419
+ ++ I G + + +ALELL ++ + + P G +W
Sbjct: 341 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIW 386
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 133/297 (44%), Gaps = 21/297 (7%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+ LI DA R +++ LF K M+ G + + + ++
Sbjct: 311 YTALIDGLCDAERMKEAEKLFGK------------------MVTAGVIPNLASYNALIHG 352
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+ +++ D L + E+K G ++ Y I L EK+ A ++N+M+ +GIK
Sbjct: 353 FVKAKNM--DRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIK 410
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
+ + YT +++ + + L +E+ L V T+ V I+GLCK V I
Sbjct: 411 ANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDY 470
Query: 299 IACME-ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M + G +P+ Y ++ LCK ++ L ++M +G+V + Y+ ++DG
Sbjct: 471 FGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNL 530
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+G+++EA L ++ G+ + + G Q ++KA L++M +++ P
Sbjct: 531 KQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILP 587
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
M G KP + Y ++++ + + D A LF+E+ GL+PD TYN I+G
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYG 179
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K ++ + M+ + +PDVITYN+L+ CK +L + E +EMK G+ N+
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+YS ++D + + +A + G + + C+ G + A L +M
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM 299
Query: 408 ADKDVSPGARVWEALL 423
+ V + AL+
Sbjct: 300 LEVGVEWNVVTYTALI 315
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 12/248 (4%)
Query: 202 FCFGMV-DYTNVIRSLV--KKE----KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
FC M D +++R +V K E VFD L + G ++++++ +++
Sbjct: 21 FCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLE 80
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
E A + F ++ + P + N ++ K + + M GSKP V TY
Sbjct: 81 E----ATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTY 136
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N ++ + K ++ R L +EMK++G++ + TY+ MIDG G + + EE +
Sbjct: 137 NIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
++ I C+ G + K LE ++M + P V + L+ + K D +
Sbjct: 197 MSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNV-VSYSTLVDAFCKEDMMQ 255
Query: 435 TSFIRLVD 442
+ VD
Sbjct: 256 QAIKFYVD 263
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 137/301 (45%), Gaps = 11/301 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ IL N +D S +++ +C + L DE+ G + +M K G V
Sbjct: 388 ALSILEEAENGRGDLDTFAYSSMINGLCREGRL--DEVAGVLDQMTKHGCKPNPYVCNAV 445
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I V+ K+ DAL M S G P +V Y ++NG+ E + +A L E+L G
Sbjct: 446 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGW 505
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ TY++ +NGLC+ ++ + + E G KPDV +N ++ LC ++ +
Sbjct: 506 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 565
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EMK + V NL T++ +++G D A + + L GL ++ T+ GLC
Sbjct: 566 LYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLC 625
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCKME 452
+ A+ L D+ V P A W L+ ++ ++ F+ P M+
Sbjct: 626 SCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFV---------PASMK 676
Query: 453 G 453
G
Sbjct: 677 G 677
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 41/280 (14%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
G + +T ++++ C ++ + ELL + M GF + Y +I SL K +
Sbjct: 119 GLSPNLQTYNILIKISCRKKQFDKAKELLNW---MWGQGFSPDVFSYGTLINSLAKNGYM 175
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV-LGLVPDVYTYNV 281
DAL + ++M G+ PD+ CY ++++G + D + A E+++ LL + P++ +YNV
Sbjct: 176 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 235
Query: 282 YINGLCK-----------------------------------QNNVEAGIKMIACMEELG 306
INGLCK N++ ++ M E G
Sbjct: 236 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 295
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PDV+ YNT+L + + EL K M+ +G + +Y+I+I GL + EA
Sbjct: 296 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAI 354
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+ E K C S + + GLC+ G + KAL +L++
Sbjct: 355 SIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 394
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 134/301 (44%), Gaps = 5/301 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
R R+ +E+ M +G C + ++++ + E + DE + + + + C
Sbjct: 311 LRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKV--DEAISIWELLPEKDCCA 367
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++ L K + AL IL + ++ D Y+ ++NG+ + + +
Sbjct: 368 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVL 427
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
D++ G P+ Y N ING + + +E ++ M G P V+TYNTL+ L K
Sbjct: 428 DQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKA 487
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ LVKEM KG N+ TYS++++GL + A L +AL KG M
Sbjct: 488 ERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 547
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ I GLC G V AL+L +M ++ P L+ DF S ++ D I
Sbjct: 548 NIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERAS--KIWDHI 605
Query: 445 L 445
L
Sbjct: 606 L 606
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 2/238 (0%)
Query: 188 DELLGFVQEMKKLGFC-FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D+ L Q M ++ C G+ Y +++ +L++ K +A ++ G+ P++ Y +
Sbjct: 70 DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 129
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ ++ + KA+EL + + G PDV++Y IN L K + +K+ M E G
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 189
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKE-MKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
PDV YN L+ K ++ E+ + +K + N+ +Y++MI+GL G E+
Sbjct: 190 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 249
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + I GLC G + A + K+MA+ VSP V+ +L
Sbjct: 250 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTML 307
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 2/146 (1%)
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E G +P + +YN+LL AL + + + + G+ NLQTY+I+I K
Sbjct: 81 EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 140
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+A LL +G + I L + G + AL+L +M ++ V+P + L
Sbjct: 141 DKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 200
Query: 423 LLSSVSKLDFVNTSFIRLVDQILNTP 448
+ K D +N S + +++L P
Sbjct: 201 IDGFFKKGDILNAS--EIWERLLKGP 224
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 32/312 (10%)
Query: 72 SIYNCEPPPEAYHFVIKTLAENSQFC---DISSVLDHIEKRENFETPEFIFI--DLIKTY 126
S++ C P Y+ +I FC +IS + +EK EN P+ I ++
Sbjct: 238 SVHGCPPNTVTYNCLIDA------FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGL 291
Query: 127 ADAHRFQDSVNLFYK----IPK---------------FRINRVGFAIEILNCMINDGFCV 167
A R ++ F + P+ N VG A+E+ + +++G
Sbjct: 292 CRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSP 351
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D ++S + + L ++ MK+ GF Y +I +K+++ +A
Sbjct: 352 DAIMYFTMISGLTQAGRL--EDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYE 409
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +MK GI+PD+ Y +L+G D+ +EL +++ G P V T+ ++G C
Sbjct: 410 LLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYC 469
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K ++ ++++ M+E G P+ + YNTL+ LCK +++ EL EMK K + N+
Sbjct: 470 KVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVT 529
Query: 348 TYSIMIDGLASK 359
T++ ++ GL K
Sbjct: 530 TFNALLKGLRDK 541
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 135/281 (48%), Gaps = 6/281 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A E++ M N+G + T + I+ +C R + L F +E K+ + G
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLC--RAGRTGAALEFFRE-KRTVWPEG 314
Query: 206 ---MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V Y+ ++ +L+ V A+ + ++ S+G PD + Y +++G+ A
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ + G D YN+ I G C++ + +++ M+E+G +PDV TYNTLL C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K + + EL+ +M G ++ T+ ++ G G I EA +L G+ +
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+++ I LC+RG V A+EL +M +K V + ALL
Sbjct: 495 IYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 47/288 (16%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVI----VQEDYVK 259
+V Y ++ L K +V DAL +L+ M I+PD+V V++G+ VQE
Sbjct: 172 VVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAF 231
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG------------- 306
E+ V G P+ TYN I+ C+ N+ +++ ME G
Sbjct: 232 VEQRMSS--VHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 307 ------------------------SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
K + +TY+TL+ AL + EL E +G
Sbjct: 290 GLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH 349
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ Y MI GL G + +AC + G + ++ I G C++ + +A E
Sbjct: 350 SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYE 409
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
LL++M + + P + LL S DF L+ ++++ C+
Sbjct: 410 LLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVD--ELLGKMIDDGCQ 455
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACM--EELGSKPDVITYNTLLQALCKVRELNRLR 331
PDV TY + +NGLCK V ++++ M ++L +PDV+T NT++ LCK +
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 332 ELVKEM--KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
V++ G N TY+ +ID G+I A L+E+ N+G+ + +
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 390 GLCQRGLVRKALELLKQ 406
GLC+ G ALE ++
Sbjct: 290 GLCRAGRTGAALEFFRE 306
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV--------LGLVPDVYTYNVYINGLCK 288
++PD+V Y +++NG+ KA + D L V L + PDV T N ++GLCK
Sbjct: 168 VRPDVVTYGILVNGL------CKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCK 221
Query: 289 QNNVEAGIKMIAC-MEEL-GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
V+ + + M + G P+ +TYN L+ A C+V ++ ELV++M+ +G+ N+
Sbjct: 222 SGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNI 281
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEAL-----NKGLCTQSSMFDETICGLCQRGLVRKAL 401
T + ++ GL G A E KG + + + L V A+
Sbjct: 282 VTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG---NAVTYSTLVGALLHTNNVGMAM 338
Query: 402 ELLKQMADKDVSPGARVW 419
EL + + SP A ++
Sbjct: 339 ELFHEKMSEGHSPDAIMY 356
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 107 EKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK---------FRINRVGF---- 152
EK +P+ I + +I A R +D+ ++ + + + I GF
Sbjct: 343 EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402
Query: 153 ----AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-DELLGFVQEMKKLGFCFGMV 207
A E+L M G D T + +LS C+ D ++ DELLG +M G ++
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLG---KMIDDGCQPSVI 459
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ ++ K K+ +AL IL M GI P+ V Y +++ + + D A ELFDE+
Sbjct: 460 TFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ +V T+N + GL +N E +++ M E PD +T + L++ L
Sbjct: 520 KEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 170/390 (43%), Gaps = 67/390 (17%)
Query: 68 LHSFSIYNCEPPPEAYHF-------VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
LH F N P P+ + + +I L F ++ +L + + E +F
Sbjct: 28 LHLFQHPNSNPNPKPFRYSLLCYDLMITKLGRAKMFHEMEQILLQFKTQTRLVAKEPLFC 87
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFRINR-VGFAIEILNC-MINDGFCV----------- 167
++I Y A Q+++ +F ++P +R R + +LN MI F V
Sbjct: 88 NIITFYGRAGLPQNALKMFDEMPLYRCQRTIKSYNTLLNVLMICKEFDVMREHFVNIKRH 147
Query: 168 ---DGKTCSLILSSVCEQRDLSSDELLGFVQEMKK--------------LGFC------- 203
DG T ++++ +C D D+ L + EMK G C
Sbjct: 148 VKPDGCTFNIMIRGLCS--DGRVDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKE 205
Query: 204 -FGMVDYTNVIRSLVKKEKVFD--------------ALGILNQMKSDGIKPDIVCYTMVL 248
F + DY + L E V+ AL + +M+ DG+K D Y+ ++
Sbjct: 206 AFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLI 265
Query: 249 NGVIVQEDYVKAEELFDELLVL---GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+G+ + +E+F L+ + G D TYNV ING CK + E K++ M E
Sbjct: 266 SGLF---KVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMEN 322
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
KPDVI+YN +L LCK + + +L ++M +G ++ +Y I+ DGL+ + +A
Sbjct: 323 RCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDA 382
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRG 395
+L+E + KG +SS + I LCQ G
Sbjct: 383 AFILDEMVFKGFAPRSSSICKFINRLCQNG 412
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 153 AIEILNCMIN-DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A ++ + M+N G C + + ++ +C +LS L +EM++ G Y+
Sbjct: 206 AFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGELSF--ALRLKEEMERDGVKVDSAIYST 263
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L K + + G+L +M+ G K D V Y +++NG +D+ A ++ DE++
Sbjct: 264 LISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENR 323
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
PDV +YNV + LCK + M G PDV++Y + L E
Sbjct: 324 CKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAA 383
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
++ EM +KG + I+ L GD
Sbjct: 384 FILDEMVFKGFAPRSSSICKFINRLCQNGD 413
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F++ R +L M G D T +++++ C+ +D + + EM +
Sbjct: 269 FKVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFCKDKDFET--AYKILDEMMENRCKP 326
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ Y ++ L K K +A + M G PD+V Y +V +G+ ++ A +
Sbjct: 327 DVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAAFIL 386
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
DE++ G P + +IN LC+ + + ++ C+ ++ +
Sbjct: 387 DEMVFKGFAPRSSSICKFINRLCQNGDEDLVWSVLNCLGKINA 429
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 2/290 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I + A ++ + M+ F +D + + + CE R+L D G + M+ G
Sbjct: 172 KIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNL--DGARGLLTRMESKGVKGS 229
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y ++ L + +V +A+ + N M GI D V Y ++ G E+ A E+ D
Sbjct: 230 AVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTD 289
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++L L VP V + + ++GL K+ +++ ++ + ELG P++ N L+ LCK R
Sbjct: 290 DMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDR 349
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + M +G+ N TY+I+I L +G + +A + + KG+ ++
Sbjct: 350 RFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYN 409
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
I G CQ +A LL +M +K ++P A + L+ K D +
Sbjct: 410 SLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASA 459
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 33/311 (10%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-----SDELLGF------- 193
R NRV A+E+ N M+ G D T ++ C +L +D++L
Sbjct: 242 RNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVA 301
Query: 194 -----VQEMKKLGFC------------FGMVDY----TNVIRSLVKKEKVFDALGILNQM 232
V ++K G GMV +I L K + +A + M
Sbjct: 302 SCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGM 361
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ G++P+ V Y ++++ + + A +FD + G+ VY YN ING C+ +N
Sbjct: 362 ANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNF 421
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
++ M E G P +Y+ L+ LC+ +L EL +EM G+ N+ T++ +
Sbjct: 422 HQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTL 481
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G G++ EA L ++ ++ + F+ I G C+ G VRKA +L QM D+ +
Sbjct: 482 ISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541
Query: 413 SPGARVWEALL 423
+P + +L+
Sbjct: 542 TPDNYTYRSLI 552
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 119/242 (49%), Gaps = 2/242 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
C+ ++ +C+ R E L + M G V Y +I SL K+ + DAL + +
Sbjct: 337 ACNALIDKLCKDRRFREAERL--FRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFD 394
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M+ GI+ + Y ++NG +++ +A L +E++ GL P +Y+ I GLC++
Sbjct: 395 RMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKG 454
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ + +++ M G +V T+ TL+ CK ++ L +M +V N T++
Sbjct: 455 DLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFN 514
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+MI+G G++ +A L ++ +++GL + + I LC KA E + + +
Sbjct: 515 VMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENN 574
Query: 411 DV 412
V
Sbjct: 575 CV 576
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M N G + T ++++ S+C +R + D L F M++ G + Y ++
Sbjct: 354 AERLFRGMANRGLEPNEVTYAILIHSLC-KRGMMDDALCMF-DRMREKGIRVTVYPYNSL 411
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + A G+LN+M G+ P Y+ ++ G+ + D A EL E+ G+
Sbjct: 412 INGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGV 471
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+VYT+ I+G CK N++ ++ M + P+ +T+N +++ C+V + + +
Sbjct: 472 SGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQ 531
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +M +G+ + TY +I L ++A +++ N + S + G C
Sbjct: 532 LYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFC 591
Query: 393 QRGLVRKALELLKQMADKDV 412
+ G + + + +M + V
Sbjct: 592 KEGRLTETYHIWDEMRARGV 611
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 176/398 (44%), Gaps = 32/398 (8%)
Query: 62 HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLD-HIE-KRENFETPEFIF 119
H LL+ P +Y +I L D++S ++ H E R + F
Sbjct: 422 HQARGLLNEMVEKGLAPSAASYSPLIAGLCRKG---DLASAMELHREMARNGVSGNVYTF 478
Query: 120 IDLIKTYADAHRFQDSVNLFYK------IPK-----------FRINRVGFAIEILNCMIN 162
LI + ++ LF K +P R+ V A ++ + M++
Sbjct: 479 TTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVD 538
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
G D T ++S +C L + + FV +++ T ++ K+ ++
Sbjct: 539 RGLTPDNYTYRSLISVLCLT--LGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRL 596
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+ I ++M++ G+K D++ +T+++ + D K LF E+ G+ PD +
Sbjct: 597 TETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCM 656
Query: 283 INGLCKQNNVEAGIKMIACMEEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+ K+ N+ ++ + C +++ G P+V+TY L+ LCK L+ + L +EM
Sbjct: 657 IDVHSKEENI---VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLV 713
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ N TY+ +D LA++G+ +E +L + +G + F+ I G C+ G ++
Sbjct: 714 GRFLPNSFTYNCFLDFLANEGE-LEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQG 772
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
A++L++ + P + + +++ + K+ +N +F
Sbjct: 773 AIDLMQNNTESGFFPDC-ISYSTIINELCKVGDINKAF 809
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 47/261 (18%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EMK+ G V +T +I K+E + AL ++M +DG P++V YT+++N +
Sbjct: 639 REMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKS 698
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVY-------------------------------- 282
A+ L +E+LV +P+ +TYN +
Sbjct: 699 GYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFN 758
Query: 283 --INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
I G CK ++ I ++ E G PD I+Y+T++ LCKV ++N+ +L EM +K
Sbjct: 759 TLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYK 818
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G+ ++ Y+I+I G+ + G+ + +N D+T +G RK
Sbjct: 819 GLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYA------DDTPVN--HKGSGRKV 870
Query: 401 LELLKQ-----MADKDVSPGA 416
+E ++Q +A+K+ + G
Sbjct: 871 IENMQQIYAGELANKNFAYGG 891
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 149/382 (39%), Gaps = 56/382 (14%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y +I +L + D + D + ++ + + LI Y F +
Sbjct: 367 EPNEVTYAILIHSLCKRGMMDDALCMFDRMREK-GIRVTVYPYNSLINGYCQHDNFHQAR 425
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
L LN M+ G + S +++ +C + DL+S + +E
Sbjct: 426 GL------------------LNEMVEKGLAPSAASYSPLIAGLCRKGDLAS--AMELHRE 465
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M + G + +T +I K + +A + ++M + P+ V + +++ G +
Sbjct: 466 MARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGN 525
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYIN-------------------------------- 284
KA +L+D+++ GL PD YTY I+
Sbjct: 526 VRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTT 585
Query: 285 ---GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
G CK+ + + M G K D+I++ ++ A K+ + ++ L +EMK KG
Sbjct: 586 LMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKG 645
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+ + ++ MID + + +I++A ++ + G + I LC+ G + A
Sbjct: 646 VKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQ 705
Query: 402 ELLKQMADKDVSPGARVWEALL 423
L ++M P + + L
Sbjct: 706 ILCEEMLVGRFLPNSFTYNCFL 727
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 46/289 (15%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
R+ R A ++L ++ G + T S IL ++ + R + L EM + F
Sbjct: 136 LRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDL--FDEMVQCKFPL 193
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
YT IR+ + + A G+L +M+S G+K V
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAV---------------------- 231
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
YNV + GLC+ N V +++ M E G D +TY TL+ C+
Sbjct: 232 -------------PYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRT 278
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE----ACGLLEEALNKGLCTQ 380
EL E+ +M V ++ + S M+DGL +G I + AC L E + L
Sbjct: 279 EELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFAC 338
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+++ D+ LC+ R+A L + MA++ + P V A+L+ S+ K
Sbjct: 339 NALIDK----LCKDRRFREAERLFRGMANRGLEPN-EVTYAILIHSLCK 382
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%)
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
S ++ + DA +L S GI + +L +I + A +LFDE++
Sbjct: 134 SYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPL 193
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D Y Y I C+ N++ ++ ME G K + YN L+ LC+ + E+
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M +GIV + TY ++ G ++ A + ++ L+ + + GL +R
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKR 313
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G + KA L + + + P AL+
Sbjct: 314 GHIDKAFRLACHLGELGMVPNLFACNALI 342
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++L+ I +G + T + ++ C+ + + +Q + GF + Y+ +I
Sbjct: 740 KVLHATILEGCLANTVTFNTLIKGFCKAGQIQG--AIDLMQNNTESGFFPDCISYSTIIN 797
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L K + A + N+M G+KPDIV Y +++ + ++ K ++ +++ L
Sbjct: 798 ELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYAD 857
Query: 275 DV 276
D
Sbjct: 858 DT 859
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 206/476 (43%), Gaps = 78/476 (16%)
Query: 49 PPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEA---YHFVIKTLAENSQFCDISSVLDH 105
PP K + ++P +S I + P A ++ V++ N S+++D
Sbjct: 33 PPPKTLLEPRRKPKFISHETAVNLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDK 92
Query: 106 IEKRENF------------ETPEF---IFIDLIKTYADAHRFQDSVNLFYKI-PKFRINR 149
+ + + F ET +F +F++L+K +A + F+ V +F KI P R
Sbjct: 93 LARAKKFQAVDALLRQMMYETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKP 152
Query: 150 VGFAIEI-LNCMIND-------GFCVD--------GKTC--SLILSSVCEQRDLSSDELL 191
AI LN ++ GF +D TC ++ + C+ DL S
Sbjct: 153 SLKAISTCLNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESA--F 210
Query: 192 GFVQEMKKLGFCF-GMVDYTNVIRSL----------------VKKEKVF-DALG------ 227
V+EMKK + ++ Y+ ++ L V K+++ DAL
Sbjct: 211 AVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLIN 270
Query: 228 -------------ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
I+ MKS+G P++ Y+ +++G + +A + F+E+ + GL
Sbjct: 271 GFSCWGKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQ 330
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D Y + IN C+ ++ + ++ M+E K D++T N LL+ C ++
Sbjct: 331 DTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGML 390
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+ +GI LN +Y I+++ L KGD+ +A LL L++G + +E + GLC+
Sbjct: 391 NRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKA 450
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
G+ A+ L +A+ P W ALL+ V + + +F L+D++ C+
Sbjct: 451 GMADDAVVALYGLAEMGFKPEQDSW-ALLVEFVCRERKLLLAF-ELLDELTANECE 504
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 3/200 (1%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-V 269
N + S+ KK +++ + MK G+ P +V + +L+ V+ + A++LFDE+L
Sbjct: 241 NFVFSIEKKSGGAESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 300
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ PD YT+N+ I G C + V+ G M PDV+TYNTL+ LC+ ++
Sbjct: 301 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKI 360
Query: 330 LRELVKEM--KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+VK M K + N+ TY+ +I G K D+ EA LL E +++GL ++
Sbjct: 361 AHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTL 420
Query: 388 ICGLCQRGLVRKALELLKQM 407
I GLC+ + K E+L+ M
Sbjct: 421 IQGLCEAQKLDKIKEILEGM 440
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 165/375 (44%), Gaps = 46/375 (12%)
Query: 86 VIKTLAE---NSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYA---DAHRFQDSVNLF 139
V KT+ E + +S+L + KR + +F +++ TY D + F N+
Sbjct: 258 VFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTF----NIL 313
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCV-----------DGKTCSLILSSVCE--QRDLS 186
+ GF +N M+++GF D T + ++ +C + ++
Sbjct: 314 IR---------GFC---MNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 361
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ + G V++ L +V YT +IR K+ + +AL +L +M S G+KP+ + Y
Sbjct: 362 HNVVKGMVKKSPNLSP--NVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNT 419
Query: 247 VLNGVIVQEDYVKAEELFDELLV-LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G+ + K +E+ + ++ G +PD T N I C +E + M EL
Sbjct: 420 LIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL 479
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN-------LQTYSIMIDGLAS 358
+PD TY+ L+++LC+ + R E E+ K I+L+ + Y+ M + L S
Sbjct: 480 RVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCS 539
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G +A + + + +G S + I G C+ G +LL M +D P A
Sbjct: 540 NGKTKKAERVFRQLMKRGTQDPPS-YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAET 598
Query: 419 WEALLLSSVSKLDFV 433
+ ++ + K D V
Sbjct: 599 YGLMIDGLLKKGDPV 613
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
+I++ M G T + +LS V ++ S + L F + + G + +
Sbjct: 255 SIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQL-FDEMLDTYGVTPDTYTFNIL 313
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL--VL 270
IR V + +M PD+V Y +++G+ A + ++
Sbjct: 314 IRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSP 373
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
L P+V TY I G C + ++ + ++A M G KP+ ITYNTL+Q LC+ ++L+++
Sbjct: 374 NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 433
Query: 331 RELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+E+++ M G + + T + +I + G + EA + E+ + S+ + +
Sbjct: 434 KEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVR 493
Query: 390 GLCQRGLVRKALELLKQMADKDV 412
LCQRG R+A E ++A+K++
Sbjct: 494 SLCQRGDFRRAEEFFDELAEKEI 516
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 118/253 (46%), Gaps = 17/253 (6%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ +L M++ G + T + ++ +CE + L D++ ++ M G G + T
Sbjct: 398 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKL--DKIKEILEGMVGDG---GFIPDTCT 452
Query: 213 IRSLVKKE----KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +L+K K+ +A + +M ++PD Y++++ + + D+ +AEE FDEL
Sbjct: 453 LNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELA 512
Query: 269 V-------LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+G P V YN LC + ++ + + G++ D +Y TL+
Sbjct: 513 EKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGH 571
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ +L+ M + V + +TY +MIDGL KGD + A LE+ L +
Sbjct: 572 CREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTT 631
Query: 382 SMFDETICGLCQR 394
++F + L ++
Sbjct: 632 AIFHSILAALVEK 644
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+LG ++ ++ + K++ IK+ M+E+G P V+T+N+LL + K +
Sbjct: 229 ILGRSRNLNAARNFVFSIEKKSGGAESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTS 288
Query: 329 RLRELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDE 386
++L EM G+ + T++I+I G + E +E +++ C + ++
Sbjct: 289 MAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKE-MSRFKCDPDVVTYNT 347
Query: 387 TICGLCQRGLVRKALELLKQMADK--DVSPGARVWEALLLSSVSKLDFV 433
+ GLC+ G V+ A ++K M K ++SP + L+ K D
Sbjct: 348 LVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMA 396
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/420 (19%), Positives = 155/420 (36%), Gaps = 82/420 (19%)
Query: 72 SIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAH 130
S + C+P Y+ ++ L + +V+ + K+ +P + + LI+ Y
Sbjct: 334 SRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQ 393
Query: 131 RFQDSVNLFYKIPK--FRINRVGFAI---------------EILNCMINDG-FCVDGKTC 172
++++L ++ + N++ + EIL M+ DG F D T
Sbjct: 394 DMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTL 453
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK------EKVFDAL 226
+ ++ + C L +E ++M +L Y+ ++RSL ++ E+ FD L
Sbjct: 454 NTLIKAHCTMGKL--EEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDEL 511
Query: 227 GILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ D G KP + Y + + KAE +F +L+ G D +Y I G
Sbjct: 512 AEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILG 570
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK----VRELNRLRELVKEMKWKG 341
C++ EAG ++ M PD TY ++ L K V L +++K
Sbjct: 571 HCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPT 630
Query: 342 IVL-------------------NLQTYSIMI---DGLASKG------------------- 360
+ +L T+++ + GL K
Sbjct: 631 TAIFHSILAALVEKERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEEL 690
Query: 361 --------DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
++EA +L +L K M I GLC+ V +A L ++ +K +
Sbjct: 691 VSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGM 750
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + DG D + I+++ C ++ D + V++M+K + +
Sbjct: 513 AFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNM--DRAICMVRQMQKERHRPTTRTFLPI 570
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + ++ AL I + M+ G P + Y ++ G++ + KA + DE+ V G+
Sbjct: 571 IHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGV 630
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +TY + G + E + + G + DV TY LL++ CK +
Sbjct: 631 GPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALA 690
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ KEM K I N Y+I+IDG A +GD+ EA L+++ +GL + I C
Sbjct: 691 VTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACC 750
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++KA E++++M + P + + L+
Sbjct: 751 KAGDMQKATEIIQEMEASGIKPNLKTYTTLI 781
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+K+ GF ++ Y +I K KV AL I MK GIK ++ Y+M++NG + +D
Sbjct: 450 LKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKD 509
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ A +F++ GL PDV YN I C N++ I M+ M++ +P T+
Sbjct: 510 WANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLP 569
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ + E+ R E+ M+ G + + TY+ +I GL K + +A +L+E G
Sbjct: 570 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAG 629
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + + G G KA + + ++ + +EALL S
Sbjct: 630 VGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKS 678
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 111/239 (46%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M++ G + Y +I LV+K ++ A+ IL++M G+ P+ YT ++ G D
Sbjct: 590 MRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGD 649
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA + F L GL DVYTY + CK +++ + + M + YN
Sbjct: 650 TEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNI 709
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ + ++ +L+++M+ +G++ ++ TY+ I+ GD+ +A +++E G
Sbjct: 710 LIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASG 769
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
+ + I G + + KAL ++M P V+ L+ S +S+ F +
Sbjct: 770 IKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQS 828
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 2/267 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M G S ++ + RD+ +E L V++MK+ G +V Y+ +
Sbjct: 303 ARQTFESMRARGIEPSSHVYSSLIHAYAVGRDM--EEALHCVRKMKEEGIEMTIVTYSII 360
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K A + K + V Y ++ + +AE L E+ G+
Sbjct: 361 VGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGI 420
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ Y+ ++G N E + + ++E G P VI+Y L+ KV ++++ E
Sbjct: 421 DAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALE 480
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ K MK GI N++TYS++I+G D A + E+ GL +++ I C
Sbjct: 481 ISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFC 540
Query: 393 QRGLVRKALELLKQMADKDVSPGARVW 419
G + +A+ +++QM + P R +
Sbjct: 541 GMGNMDRAICMVRQMQKERHRPTTRTF 567
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R V A +++ M +G D T + +++ C+ D+ + +QEM+ G
Sbjct: 716 RRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQ--KATEIIQEMEASGIKPN 773
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
+ YT +I + AL +MK G KPD Y ++ ++ + + ++
Sbjct: 774 LKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQS 828
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +C++ DL L F Q MK+ GF +V Y ++I K + + + I
Sbjct: 58 TYNIMIDYLCKEGDLEMARSL-FTQ-MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFE 115
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QMK PD++ Y ++N E KA E E+ GL P+V TY+ +I+ CK+
Sbjct: 116 QMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEG 175
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ IK M + P+ TY +L+ A CK L +LV+E+ GI LN+ TY+
Sbjct: 176 MLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYT 235
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++DGL +G + EA + LN G+ + + G + + A ++LK+M +K
Sbjct: 236 ALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 295
Query: 411 DVSPGARVWEALL 423
+ P ++ +L
Sbjct: 296 CIKPDLLLYGTIL 308
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 14/278 (5%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+ A E L+ M +G + T S + + C++ L E + F +M+++
Sbjct: 138 KFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ--EAIKFFVDMRRVALTPN 195
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
YT++I + K + +AL ++ ++ GIK ++V YT +L+G+ + +AEE+F
Sbjct: 196 EFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR 255
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+L G+ P+ TY ++G K +E ++ M+E KPD++ Y T+L LC
Sbjct: 256 AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNES 315
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L + L+ E+K GI N Y+ ++D G EA LLEE L+
Sbjct: 316 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD----------- 364
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ A +L +M DK + P + AL+
Sbjct: 365 -LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 401
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 6/256 (2%)
Query: 170 KTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
++C+ +L + + + DLS F ++M G + Y +I L K+ + A
Sbjct: 22 RSCNALLHRLSKVGRGDLSRK----FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARS 77
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ QMK G PDIV Y +++G + +F+++ PDV TYN IN C
Sbjct: 78 LFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFC 137
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K + + + M+ G KP+V+TY+T + A CK L + +M+ + N
Sbjct: 138 KFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEF 197
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ +ID G++ EA L+EE L G+ + + GLC+ G +++A E+ + M
Sbjct: 198 TYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM 257
Query: 408 ADKDVSPGARVWEALL 423
+ V+P + AL+
Sbjct: 258 LNAGVAPNQETYTALV 273
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 118/236 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + ++MK ++ Y +I K E++ A L++MK++G+KP++V Y+
Sbjct: 108 DECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTF 167
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ + +A + F ++ + L P+ +TY I+ CK N+ +K++ + + G
Sbjct: 168 IDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGI 227
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
K +V+TY LL LC+ + E+ + M G+ N +TY+ ++ G ++ A
Sbjct: 228 KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKD 287
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L+E K + ++ + GLC + +A L+ ++ + ++ A ++ L+
Sbjct: 288 ILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 343
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 155/377 (41%), Gaps = 42/377 (11%)
Query: 72 SIYNC----EPPPEAYHFV--IKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
++ NC E P+A+ F+ +K S+ +D K E + + IK
Sbjct: 131 ALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK-------EGMLQEAIKF 183
Query: 126 YADAHRFQDSVNLFYKIPKFRIN----RVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
+ D R + N F N + A++++ ++ G ++ T + +L +CE
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+ + E + + M G YT ++ +K +++ A IL +MK IKPD+
Sbjct: 244 EGRMKEAEEV--FRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY------------------- 282
+ Y +L G+ + +A+ L E+ G+ + Y
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361
Query: 283 ----INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
++GLCK N E K+ M + G PD I Y L+ K L L M
Sbjct: 362 MLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMI 421
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G+ L+L Y+ +I GL+ G + +A LL+E + KG+ ++ I G V
Sbjct: 422 EIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVD 481
Query: 399 KALELLKQMADKDVSPG 415
+ALEL +MA + + G
Sbjct: 482 EALELQNEMAKRGMITG 498
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
IL +C + L +LL + E+K+ G V YT ++ + K + +AL +L +M
Sbjct: 307 ILWGLCNESRLEEAKLL--IGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 364
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+++G+ + A++LFDE+L G++PD Y I+G K N++
Sbjct: 365 ------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 412
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ + M E+G + D+ Y L+ L ++ + R L+ EM KG++ + Y +I
Sbjct: 413 ALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 472
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSS 382
+ G + EA L E +G+ T S
Sbjct: 473 KYYALGKVDEALELQNEMAKRGMITGLS 500
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A E F ++ + P + N ++ L K + K M G K V TYN ++
Sbjct: 4 EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 63
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCK +L R L +MK G ++ TY+ +IDG G +++ C + E + C
Sbjct: 64 DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLG-LLDECICIFEQMKDADC 122
Query: 379 TQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I C+ + KA E L +M + P + +
Sbjct: 123 DPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFI 168
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 20/290 (6%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL-GFVQEMKKLGFCFGMVDYTN 211
AI +L M +G D + + ++S C+ +S EL G EM G C V YT
Sbjct: 489 AIRVLELMKANGCQPDEWSYTELISGFCK---ISKMELASGMFNEMMDRGLCPNEVTYTA 545
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I K EK+ A +L +MK G +P++ Y ++++G+ Q ++ AEEL +L
Sbjct: 546 LISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK 605
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PDV TY+ INGLC + ++M M + G P++ TY++L+QAL + +
Sbjct: 606 ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAE 665
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
E+ E+K +G++ + TY MI+ G + A L E +N G +D I GL
Sbjct: 666 EMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725
Query: 392 CQRGLVRKALELLK---------QMADKDVSPGARVWEALLLSSVSKLDF 432
+ K + L Q+ +KDV ++L S +++LDF
Sbjct: 726 QNEMVYHKLVALPNAASTSTFDDQIINKDVI-------SVLSSKLAELDF 768
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 154/378 (40%), Gaps = 31/378 (8%)
Query: 70 SFSIYN------CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEK--RENFETPEFIFID 121
+F I+N CEP Y +I L + + ++ LD I + R F
Sbjct: 282 AFEIFNRMDEEGCEPNAATYSTLINGLCNSGR---VNEALDFISEMTRHGVLPTVHTFTA 338
Query: 122 LIKTYADAHRFQDSVNLFYKIPKF----------------RINRVGFAIEILNCMINDGF 165
I D R +D+ +F + K R++R+ AI + + M DG
Sbjct: 339 PIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM--AIGLFHRMSRDGV 396
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
+ T + +++ + E ++ D L M K G Y +IR A
Sbjct: 397 VPNTVTYNALMNVLMENMEI--DSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKA 454
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ +L M P +V Y +++ G D A + + + G PD ++Y I+G
Sbjct: 455 MSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISG 514
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
CK + +E M M + G P+ +TY L+ CK +L+ +++ MK G N
Sbjct: 515 FCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPN 574
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+QTY+++I GL + + A L + L + + + I GLC G + ALE+
Sbjct: 575 VQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFN 634
Query: 406 QMADKDVSPGARVWEALL 423
+M P + +L+
Sbjct: 635 KMVKHGCLPNLHTYSSLI 652
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + N M G + + + ++ C D +++ + + M K +V Y +
Sbjct: 419 ALIVFNMMGKHGCLPNTSSYNELIRGYCTIGD--TEKAMSMLTNMLKGRPTPTLVTYNII 476
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ A+ +L MK++G +PD YT +++G A +F+E++ GL
Sbjct: 477 IKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGL 536
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TY I+G CK ++ +M+ M+ G +P+V TYN L+ L K + E
Sbjct: 537 CPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEE 596
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K M + I ++ TYS +I+GL + G I A + + + G + I L
Sbjct: 597 LCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALG 656
Query: 393 QRGLVRKALELLKQMADKDVSP 414
Q G V +A E+ ++ + + P
Sbjct: 657 QEGRVEEAEEMFSELKKQGLIP 678
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+ L ++ + G G+ YT ++ L K + +Q+ +G++P+++ Y V+
Sbjct: 176 QALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVI 235
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
N + + AE + +++ G+ PD +TY I G C+ ++++ ++ M+E G +
Sbjct: 236 NALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCE 295
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+ TY+TL+ LC +N + + EM G++ + T++ I L G I +A +
Sbjct: 296 PNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKI 355
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ KG + I G QR + R A+ L +M+ V P + AL+
Sbjct: 356 FIDMKKKGCKPNVYTYTSLISG--QR-VSRMAIGLFHRMSRDGVVPNTVTYNALM 407
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 123/304 (40%), Gaps = 36/304 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS------------------------- 187
A I+N + G D T + ++ C RDL S
Sbjct: 247 AESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLIN 306
Query: 188 --------DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
+E L F+ EM + G + +T I +L ++ DA I MK G KP
Sbjct: 307 GLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKP 366
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++ YT +++G V A LF + G+VP+ TYN +N L + +++ + +
Sbjct: 367 NVYTYTSLISGQRVSR---MAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVF 423
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M + G P+ +YN L++ C + + + ++ M L TY+I+I G
Sbjct: 424 NMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDS 483
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
GD A +LE G + E I G C+ + A + +M D+ + P +
Sbjct: 484 GDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTY 543
Query: 420 EALL 423
AL+
Sbjct: 544 TALI 547
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 134/370 (36%), Gaps = 94/370 (25%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I+++ A + N M++ G C + T + ++S C+ L D ++ MK+ G
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKL--DCAARMLERMKRSGCRPN 574
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV-------------- 251
+ Y +I L K+ A + M + I PD+V Y+ V+NG+
Sbjct: 575 VQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFN 634
Query: 252 --------------------IVQEDYVK-AEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ QE V+ AEE+F EL GL+PD TY I
Sbjct: 635 KMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSG 694
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL------------------RE 332
V+ + M G +P + TY+ L++ L ++L ++
Sbjct: 695 KVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKD 754
Query: 333 LVKEMKWK----GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS------- 381
++ + K L+ Q Y ++ L+ G EA L +++ C
Sbjct: 755 VISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFL 814
Query: 382 ----------------------------SMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ + E IC LCQ ++A + ++M + ++
Sbjct: 815 ISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALN 874
Query: 414 PGARVWEALL 423
VW L+
Sbjct: 875 ADEIVWTILI 884
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
++TY + L K N + + G +P+++ YN+++ ALCK + ++
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN 252
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
++ G+ + TY+ MI G D+ A + +G ++ + I GLC G
Sbjct: 253 KVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSG 312
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLS 425
V +AL+ + +M V P + A +++
Sbjct: 313 RVNEALDFISEMTRHGVLPTVHTFTAPIVA 342
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 138/279 (49%), Gaps = 6/279 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A + M G D T +++L + C+ R ++ + +LLG MK G + Y
Sbjct: 355 AFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLG---RMKTRGCSPTIQTYIT 411
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I +K V A +++MK G +P+ Y ++++ ++ +A + DE+ + G
Sbjct: 412 IIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAG 471
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ +Y + G + K + + E+ KP +I+Y +LL+A CK +
Sbjct: 472 VQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAI 531
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ +EM + G+ +N ++ ++DG A +GD+ EA G++++ +G + +
Sbjct: 532 AVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNAC 591
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVS 428
C+ G ++KA E +++M +D+ P + + L+ +SVS
Sbjct: 592 CKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVS 630
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 35/259 (13%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L F +EMK G Y+ ++ V+ +A + M GI+PD V Y ++L
Sbjct: 321 LEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKA 380
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+A +L + G P + TY I+G K +V K ++ M+ G +P+
Sbjct: 381 FCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPN 440
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI-------- 362
TYN ++ L ++ +++R ++ EM+ G+ N ++Y+ ++ G AS G+I
Sbjct: 441 ATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLK 500
Query: 363 -----------------IEAC----------GLLEEALNKGLCTQSSMFDETICGLCQRG 395
++AC + EE G+ + +F+ + G QRG
Sbjct: 501 RVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRG 560
Query: 396 LVRKALELLKQMADKDVSP 414
+ +A ++++M + +P
Sbjct: 561 DMWEAYGIMQKMRQEGFTP 579
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 130/281 (46%), Gaps = 8/281 (2%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S I+ + C+ ++ E L V +M++ G + Y ++ + L + +++
Sbjct: 232 SSIIHAYCKAGNMERAEAL--VADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKL 289
Query: 233 KS---DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
K+ G+ P V Y ++N +KA E E+ G+ + TY++ ++G +
Sbjct: 290 KARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQL 349
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ + M E G +PD +TYN LL+A CK R++ R +L+ MK +G +QTY
Sbjct: 350 GDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTY 409
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+IDG GD+ A + E G ++ ++ + L Q G + +A ++ +M
Sbjct: 410 ITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMEL 469
Query: 410 KDVSPGARVWEALLLSSVSKLDFVNTSF--IRLVDQILNTP 448
V P R + L+ + + + +F ++ V++I P
Sbjct: 470 AGVQPNFRSY-TTLMQGFASIGEIGLAFKCLKRVNEITQKP 509
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y +I K K+ AL +MK+ GI + Y+M+++G + D+ A +F++
Sbjct: 302 VTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFED 361
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ PD TYN+ + CK + I+++ M+ G P + TY T++ K +
Sbjct: 362 MSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGD 421
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + V EMK G N TY++++ L G I A +++E G+ +
Sbjct: 422 VRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTT 481
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G G + A + LK++ + P + +LL
Sbjct: 482 LMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLL 518
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 38/258 (14%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M+ G + Y N+IR+ + + + A+ + +M+ +GI P+ ++ +++G
Sbjct: 147 EKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATFSAIISGYGSS 206
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE---------- 304
+ AE+ F + +V Y+ I+ CK N+E ++A MEE
Sbjct: 207 GNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLY 266
Query: 305 ----------------------------LGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
G P +TY L+ K+ ++ + E KE
Sbjct: 267 NILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKE 326
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
MK +GI LN TYS+++DG GD A + E+ G+ ++ + C+
Sbjct: 327 MKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQ 386
Query: 397 VRKALELLKQMADKDVSP 414
+ +A++LL +M + SP
Sbjct: 387 MTRAIQLLGRMKTRGCSP 404
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
DY +I K+ A +M++ GI + Y ++ I+ ++ A +E+
Sbjct: 125 DYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEEM 184
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G+ P+ T++ I+G NVEA K +V Y++++ A CK +
Sbjct: 185 EIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNM 244
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLAS---KGDIIEACGLLEEALNKGLCTQSSMF 384
R LV +M+ +G+ L Y+I++DG A + + L+ ++ GL + +
Sbjct: 245 ERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAVTY 304
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
I + G + KALE K+M + ++ + L+ V DF N
Sbjct: 305 GCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANA 355
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 9/247 (3%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D + EM+ G YT +++ ++ A L ++ KP I+ Y +
Sbjct: 458 DRAASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASL 517
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L A + +E+ G+ + Y +N ++G ++ ++ ++ M + G
Sbjct: 518 LKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGF 577
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD+ +Y + + A CK ++ + E ++EMK + + NLQTY+I+I G S +A
Sbjct: 578 TPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALI 637
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRK------ALELLKQMADKDVS---PGARV 418
+E GL ++ + L + + + L++ +M D+ + A+
Sbjct: 638 CYDEMKAAGLIPDKPLYYCIVTSLLSKAAIARETVRNGVLQVTSEMVDQGMCIDLATAKQ 697
Query: 419 WEALLLS 425
W+ L++
Sbjct: 698 WQRSLMN 704
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 114/228 (50%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM++ G +V Y +I L ++ +V +A ++ +MK DG+ P+++ Y +++G
Sbjct: 281 EMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIG 340
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ KA LF+++ G P + TYN+ I G + N M+ ME G P +TY
Sbjct: 341 NLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYT 400
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ AL + + + ++ M+ G+V ++ Y ++I GL GD+ EA L +
Sbjct: 401 ILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEM 460
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +++ I G C+ G +AL LLK+M + + P + + +
Sbjct: 461 HLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 508
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 3/204 (1%)
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+K F+ LG QM+ G+ P++V YT +++G D + ++LF ++ L +V + YTY
Sbjct: 168 DKGFEVLG---QMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTY 224
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
V ING K + GI++ M+ G P+V TYN+++ C +LN EL EM+
Sbjct: 225 TVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRE 284
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ N+ TY+ +I GL + ++EA L+ GL ++ I G C G + K
Sbjct: 285 RGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDK 344
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L QM SP + L+
Sbjct: 345 ASSLFNQMKSSGQSPSLATYNILI 368
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 2/270 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M G + T + ++ +C++R + E L + MK+ G ++ Y +
Sbjct: 275 AFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERL--MCRMKRDGLSPNLISYNTL 332
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + A + NQMKS G P + Y +++ G ++ ++ E+ GL
Sbjct: 333 IDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGL 392
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P TY + ++ L + +N+E ++ + ME+ G D+ Y L+ LC V ++ +
Sbjct: 393 SPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASK 452
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K + + N Y+ MI G +G A LL+E G+ + ++ TI LC
Sbjct: 453 LFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILC 512
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ +A LLK M + + P +W +
Sbjct: 513 KDEKWTEAEVLLKDMIELGLKPSISIWNMI 542
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 3/213 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I + V+ + AL NQM G+ P + +L +I + KA +F+E G
Sbjct: 88 IINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE--TKG 145
Query: 272 LVP-DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
V DVY++ + I G C+ ++ G +++ MEE+G P+V+ Y TL+ CK ++ R
Sbjct: 146 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG 205
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
++L +M +V N TY+++I+G G + L E+ G+ ++ IC
Sbjct: 206 KQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 265
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G + A EL +M ++ V+ + L+
Sbjct: 266 CCNDGKLNNAFELFDEMRERGVACNVVTYNTLI 298
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
++ L + +M G G + N++ L+K A + N+ K + +K D+ + ++
Sbjct: 99 EQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIM 157
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G K E+ ++ +GL P+V Y I+G CK ++E G ++ M EL
Sbjct: 158 IKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDV 217
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ TY L+ K+ EL ++MK GIV N+ TY+ MI + G + A
Sbjct: 218 VANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFE 277
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
L +E +G+ ++ I GLCQ V +A L+ +M +SP + L+
Sbjct: 278 LFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYC 337
Query: 426 SVSKLDFVNTSF 437
S+ LD ++ F
Sbjct: 338 SIGNLDKASSLF 349
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 52/355 (14%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMI 161
+ LIK HR + LF ++ K R + A+++ M+
Sbjct: 169 YTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEML 228
Query: 162 NDG--FCVDGK----TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV--- 212
ND + ++ K + S+I+ ++C+ R DE +EMK G ++ YT++
Sbjct: 229 NDSSLYGINFKPVVISYSIIIDALCKDR--REDEARDLFEEMKVQGMTPTVISYTSLMWE 286
Query: 213 ------------------------IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
I L K+ KV +A +L M GI P+++ Y ++
Sbjct: 287 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G + D A ELF + G PDV Y V ING CK + VE +K+ M ++G +
Sbjct: 347 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 406
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV TY LL L + ++ ++L MK GI +L Y I ++GL G + EA L
Sbjct: 407 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 466
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + F+ I GLC+ G + A EL +++ +++ P + ++
Sbjct: 467 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 521
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 33/245 (13%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ L +V + L ++ + G PDIV YT ++ G+ ++ KA LF + LG
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMI------ACMEELGSKPDVITYNTLLQALCKVR 325
P+ TY + GLC+ N+ +K+ + + + KP VI+Y+ ++ ALCK R
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256
Query: 326 ELNRLRELVKEMK---------------W------------KGIVLNLQTYSIMIDGLAS 358
+ R+L +EMK W +G+ N+ T++++ID L
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCK 316
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+G +IEA LLE + +G+ ++ I G C G + A EL M K P
Sbjct: 317 EGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVIC 376
Query: 419 WEALL 423
+ L+
Sbjct: 377 YTVLI 381
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 129/262 (49%), Gaps = 4/262 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L MI G + T + ++ C DL+S L FV M G ++ YT +
Sbjct: 323 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL-FV-SMPSKGCEPDVICYTVL 380
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K KV +A+ + N M G +PD+ Y +L G+ A++LF + V G+
Sbjct: 381 INGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGI 440
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D+Y Y +++NGLCK + +++ ++ K D+ +N L+ LCK +L E
Sbjct: 441 PGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWE 500
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGL 391
L +++ + + ++ TY+IMI G +++A +L + + K CT + + I G
Sbjct: 501 LFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA-NILFQKMEKNGCTPDKITYATLIRGF 559
Query: 392 CQRGLVRKALELLKQMADKDVS 413
+ + K +ELL M +DVS
Sbjct: 560 FESKKLEKVVELLHMMVQRDVS 581
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A + N M+N G + T ++++ +C E + + + +LL + M + G ++ Y +
Sbjct: 288 AKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL---EVMIQRGIVPNLLTYNS 344
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I + A + M S G +PD++CYT+++NG +A +L++ +L +G
Sbjct: 345 LIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVG 404
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
PDV TY + GL + V K+ M+ G D+ Y L LCK L
Sbjct: 405 KRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAM 464
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL ++K I L+++ ++ +IDGL G + A L E+ + L ++ I
Sbjct: 465 ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEF 524
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G V KA L ++M +P + L+
Sbjct: 525 CRGGQVVKANILFQKMEKNGCTPDKITYATLI 556
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 6/212 (2%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A + M P + +T +L+G+ + Y + L++++ + G+ PD T N+ +N
Sbjct: 80 AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
LC N V G+ ++A + G PD++TY TL++ LC +++ L M+ G
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNK----GLCTQSSMFDETIC--GLCQRGLVR 398
N TY ++ GL G+I A L +E LN G+ + + +I LC+
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRED 259
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSKL 430
+A +L ++M + ++P + +L+ +L
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLMWEEAKRL 291
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 4/203 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCF 204
+ ++V A+++ N M+ G D KT +L+ + + + + +L G MK G
Sbjct: 386 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV---MKVYGIPG 442
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y + L K +F+A+ + N++KS IK DI C+ +++G+ A ELF
Sbjct: 443 DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELF 502
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++L L PDV TYN+ I+ C+ V + ME+ G PD ITY TL++ +
Sbjct: 503 EKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFES 562
Query: 325 RELNRLRELVKEMKWKGIVLNLQ 347
++L ++ EL+ M + + L++
Sbjct: 563 KKLEKVVELLHMMVQRDVSLDVN 585
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
++A + F ++ P + ++ ++GL K + + M G PD T N L
Sbjct: 78 IQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNIL 137
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L LC V + ++ + +G + ++ TY+ +I GL + I +A LL + K
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA-ALLFTRMQKLG 196
Query: 378 CTQSSMFDETIC-GLCQRGLVRKALELLKQMAD 409
CT +++ T+ GLC+ G + AL+L ++M +
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLN 229
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 3/264 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
++ +G D TC ++ E R +E G ++ G G V Y +I ++
Sbjct: 73 LVREGGADDYSTCVMVRGLCLEGR---VEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRR 129
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ L +L +M++ GI P +V Y +++ + + D K E L E+ GL P+V Y
Sbjct: 130 GDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIY 189
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N IN LCK + M+ M + PDV+T+NT++ C+ ++ +L++E
Sbjct: 190 NTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIR 249
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ N +Y+ +I G +G+ + A LL E + +G I GL G V
Sbjct: 250 RGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVND 309
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL + ++MA++ V P A ++ L+
Sbjct: 310 ALIVREKMAERQVMPDANIYNVLI 333
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 140/296 (47%), Gaps = 23/296 (7%)
Query: 149 RVGFAIEILNCMINDGFCVDGKT--------------C-------SLILSSVCEQRDLSS 187
R G A + C++ G C++G+ C ++++ C + D+
Sbjct: 75 REGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGR 134
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
LL + EM+ G +V Y +I L +K + +L +M++ G+ P++ Y V
Sbjct: 135 GLLL--LGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTV 192
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+N + +A ++ ++++ PDV T+N I G C++ +V +K++ G
Sbjct: 193 INALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGL 252
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+ ++Y L+ C E +L+ EM +G ++ T +I GL G + +A
Sbjct: 253 EPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALI 312
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E+ + + +++++ I GLC++ ++ A LL++M ++ V P ++ L+
Sbjct: 313 VREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLI 368
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 161/385 (41%), Gaps = 27/385 (7%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
+ SLL P + Y+ VI L + S +L+ + K F F +I
Sbjct: 170 VESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVK-SRFNPDVVTFNTMI 228
Query: 124 KTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
+ ++++ L + + N++ + I GFCV G+
Sbjct: 229 AGFCREGDVREALKLLREAIRRGLEPNQLSYTPLI------HGFCVRGEAM--------- 273
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
++SD L+ EM G M+ +I LV +V DAL + +M + PD
Sbjct: 274 ---VASDLLV----EMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDA 326
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y ++++G+ + A+ L +E+L + PD + Y I+G + + + K+
Sbjct: 327 NIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEF 386
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
MEE PD++ YN +++ CK + + M+ G + + TY+ ++DG A KGD
Sbjct: 387 MEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGD 445
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
I + LL + + + + ICG C G A +L +M + + P V
Sbjct: 446 ISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNV-VHYT 504
Query: 422 LLLSSVSKLDFVNTSFIRLVDQILN 446
+L+ S+ K D V + +LN
Sbjct: 505 VLIGSLFKKDKVIQAAAYFEHMLLN 529
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D ++++S +C++R LS+ + L ++EM + YT +I V+ +K+ DA
Sbjct: 325 DANIYNVLISGLCKKRMLSAAKNL--LEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARK 382
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
I M+ PDIV Y +++ G +A + G +PD +TY ++G
Sbjct: 383 IFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYA 441
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K+ ++ A ++++ M + KP++ TY +L+ C + + +L +M+ +G+ N+
Sbjct: 442 KKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVV 501
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL--CQRGLVRKALELLK 405
Y+++I L K +I+A E L + + GL C+ G+V K
Sbjct: 502 HYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTK 561
Query: 406 QMADKDV 412
Q +K
Sbjct: 562 QAHEKSA 568
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A L+ E+LV D Y+ V + GLC + VE G +I G P + YN L+
Sbjct: 64 RARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLI 123
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
C+ ++ R L+ EM+ KGI+ + TY +I L KGD+ + LL E +GL
Sbjct: 124 DGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLS 183
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+++ I LC+ +A ++L QM +P
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNP 219
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 118/270 (43%), Gaps = 5/270 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +G + +L M G T I+ + + DL+ E L + EM+ G
Sbjct: 128 RRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESL--LGEMRARGLSPN 185
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y VI +L K A +LNQM PD+V + ++ G + D +A +L
Sbjct: 186 VQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLR 245
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E + GL P+ +Y I+G C + ++ M G PD+IT L+ L
Sbjct: 246 EAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSG 305
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++N + ++M + ++ + Y+++I GL K + A LLEE L + + ++
Sbjct: 306 QVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYT 365
Query: 386 ETICGLCQRGLV---RKALELLKQMADKDV 412
I G + + RK E +++ A D+
Sbjct: 366 TLIDGFVRSDKLSDARKIFEFMEEKACPDI 395
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/315 (18%), Positives = 135/315 (42%), Gaps = 34/315 (10%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y+ +I L + ++L+ + + + + +FI+ LI + + + D+
Sbjct: 324 PDANIYNVLISGLCKKRMLSAAKNLLEEMLE-QKVQPDKFIYTTLIDGFVRSDKLSDARK 382
Query: 138 LF-------------YKIPKFRINRVGFAIEILNCM--INDGFCV-DGKTCSLILSSVCE 181
+F Y + + G E + CM + C+ D T + ++ +
Sbjct: 383 IFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAK 442
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+ D+S+ L + +M K + Y ++I + A + +M+S+G+ P++
Sbjct: 443 KGDISAS--LRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNV 500
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL--CKQNNVEAG---- 295
V YT+++ + ++ ++A F+ +L+ P+ T + +NGL C+ V +
Sbjct: 501 VHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDT 560
Query: 296 ---------IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
+ + + G P + YN ++ +LC+ L + +L +M KG + +
Sbjct: 561 KQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDP 620
Query: 347 QTYSIMIDGLASKGD 361
T+ ++ G +S G+
Sbjct: 621 ITFLSLLYGFSSAGE 635
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 90/231 (38%), Gaps = 35/231 (15%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
EF + L+ YA S+ L + K R F L C G+C G T
Sbjct: 430 EFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLIC----GYCNIGDT---- 481
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
S+++L +M+ G +V YT +I SL KK+KV A M +
Sbjct: 482 ---------YSAEDLFA---KMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLN 529
Query: 236 GIKPDIVCYTMVLNGVIV---------QEDYVKAEE------LFDELLVLGLVPDVYTYN 280
P+ ++NG++ + D +A E +F L+ GL P + YN
Sbjct: 530 HCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYN 589
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
I LC+ N + + + M G PD IT+ +LL E + R
Sbjct: 590 AIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWR 640
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 161/383 (42%), Gaps = 60/383 (15%)
Query: 79 PPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNL 138
PP+ Y ++ L +F + ++ +E E + +++ A A FQD+V
Sbjct: 164 PPDLYDLMVDILGRRKKFSFMWELVKEMENLEGY-VSLVTMKKVMRRLARAGNFQDAVEA 222
Query: 139 FYKIPKFRINRVGFAIEILNCMIN-------------------DGFCVDGKTCSLILSSV 179
F I K + + IE LN +++ D VD ++ +++L
Sbjct: 223 FRGIEKLGVRK---DIEALNVLMDALVKEGSVEHAYSAFMEFKDSIHVDFQSFNILLHGY 279
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C+ R L D+ + EM K GF +V YT I K + + I ++M+ KP
Sbjct: 280 CKARKL--DDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKP 337
Query: 240 DIVCYTMVLNG----------------------------------VIVQEDYVK-AEELF 264
+++ YT+ ++ V+ Q +K A ++F
Sbjct: 338 NVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVF 397
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ G+ PD+ TYN I C E +K++ MEE KPD+ TY LL+ C+
Sbjct: 398 EDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRK 457
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ + L+ L+ M I ++L TY +++ GL G + AC EE + KGL + +
Sbjct: 458 KRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRTY 517
Query: 385 DETICGLCQRGLVRKALELLKQM 407
+ L Q L ++ K M
Sbjct: 518 KMLVEELEQNNLTEAKEKIQKLM 540
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 181/428 (42%), Gaps = 43/428 (10%)
Query: 46 LTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLA---ENSQFCDISSV 102
LTTP + P+ P L + LHS N +P FVI +LA E+ DI V
Sbjct: 34 LTTPHSADSPDSPESPD-LPTWLHS----NKKPEFPDGDFVIPSLADWVEHHNLGDIKEV 88
Query: 103 LDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAI-EILNCMI 161
+H+ + + L K Y ++N +N I ++LN
Sbjct: 89 GNHLLFHAQVSDIDRVSEILKKHYPCTDSVVQALN------DCGVNPTNNLISQLLNRFC 142
Query: 162 ND---------------GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
ND G+ L++ + ++ S + V+EM+ L +
Sbjct: 143 NDWVPALGLFTWAKHQTGYVHPPDLYDLMVDILGRRKKFSF--MWELVKEMENLEGYVSL 200
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI----VQEDYVKAEE 262
V V+R L + DA+ ++ G++ DI ++++ ++ V+ Y E
Sbjct: 201 VTMKKVMRRLARAGNFQDAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFME 260
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
D + V D ++N+ ++G CK ++ K++ M++ G +P+V++Y ++ C
Sbjct: 261 FKDSIHV-----DFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYC 315
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+++ + + EM+ K N+ TY+I + L + +A + E + +S
Sbjct: 316 KLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDAS 375
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
+ I L Q G ++ A ++ + M + VSP + ++ S+ + L+ N ++L+
Sbjct: 376 FYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENA--LKLLR 433
Query: 443 QILNTPCK 450
++ CK
Sbjct: 434 RMEEDSCK 441
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 127/256 (49%), Gaps = 3/256 (1%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D +T S+++ + R+ E G E+++ G Y ++I K+ V A
Sbjct: 599 DVQTYSVLIHGL--SRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQ 656
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +M GI PDIV Y ++++G+ + +A+ LFD++ GL P+ TY ++G C
Sbjct: 657 LLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 716
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K N A +++ M G PD YN +L CK + + +L +EM KG +
Sbjct: 717 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV- 775
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+++ +I+G G + EA LLEE + K + I C+ G++ +A L +M
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 408 ADKDVSPGARVWEALL 423
+++V P A+ + +LL
Sbjct: 836 QERNVMPTAKTYTSLL 851
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + A E+L+ M T S+I++ +C +L + ++EM G
Sbjct: 402 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI--LREMVMNGLKPN 459
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V YT ++ + K+ +V ++ IL +M+ GI PD+ CY ++ G + +A
Sbjct: 460 AVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLM 519
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+L L P+ +TY +I+G K +E + M G P+V Y L++ CK
Sbjct: 520 EMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEG 579
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + + + + ++ ++QTYS++I GL+ G + EA G+ E KGL + ++
Sbjct: 580 NVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYN 639
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C++G V KA +LL++M K ++P + L+
Sbjct: 640 SLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 677
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 116/221 (52%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ EM G + YT +I K+ V +A + + S + D+ Y+++++G+
Sbjct: 552 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS 611
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A +F EL GL+P+ +TYN I+G CKQ NV+ +++ M G PD++
Sbjct: 612 RNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIV 671
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYN L+ LCK E+ R + L +++ +G+ N TY+ M+DG + A LLEE
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L +G+ + +++ + C+ KAL+L ++M +K +
Sbjct: 732 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA 772
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 140/268 (52%), Gaps = 7/268 (2%)
Query: 163 DGFCV-----DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
DG C D T + ++S+ C+ ++ + + + EM + G +V Y +I L
Sbjct: 204 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV--LLEMGEKGCSPNLVTYNVIIGGLC 261
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
+ + +A+ + M G+ PD+ Y +++NG +++ +A+ + E++ +GL P+
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYN I+G +Q ++E ++ M G + ++I +NTLL +CK ++ + E+++EM
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
KG+ + QTYS++I+G ++ A LL+E + L + I GLC+ G +
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 441
Query: 398 RKALELLKQMADKDVSPGARVWEALLLS 425
+ +L++M + P A V+ L+ +
Sbjct: 442 QGTNAILREMVMNGLKPNAVVYTTLMTA 469
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 134/255 (52%), Gaps = 2/255 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++I+ +C R L DE + + M G + Y +I +++ +A +L
Sbjct: 252 TYNVIIGGLCRARLL--DEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLL 309
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M G+KP+ + Y +++G + Q D +A + DE++ G+ ++ +N +NG+CK
Sbjct: 310 EMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAG 369
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+E ++++ M E G +PD TY+ L++ C+ + + R EL+ EMK + + + TYS
Sbjct: 370 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 429
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++I+GL G++ +L E + GL + ++ + + G V ++ +L++M ++
Sbjct: 430 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 489
Query: 411 DVSPGARVWEALLLS 425
+ P + +L++
Sbjct: 490 GILPDVFCYNSLIIG 504
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AIE+ M++ G D T ++++ C ++ +L+ + EM +G + Y +
Sbjct: 269 AIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM--LLEMIDVGLKPEPITYNAL 326
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +++ + A I ++M + GI+ +++ + +LNGV KA E+ E++ G+
Sbjct: 327 IDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV 386
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY++ I G C+ N+ +++ M++ P V+TY+ ++ LC+ L
Sbjct: 387 EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNA 446
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+++EM G+ N Y+ ++ A +G + E+ +LE +G+ ++ I G C
Sbjct: 447 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 506
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + +A L +M ++ + P A + A +
Sbjct: 507 KAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 105/195 (53%)
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
N+M S G+ P++ YT ++ G + + +A +F +L ++ DV TY+V I+GL +
Sbjct: 553 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 612
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ + + ++E G P+ TYN+L+ CK +++ +L++EM KGI ++ T
Sbjct: 613 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 672
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+I+IDGL G+I A L ++ +GL + + G C+ A +LL++M
Sbjct: 673 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 732
Query: 409 DKDVSPGARVWEALL 423
+ V P A ++ +L
Sbjct: 733 LRGVPPDAFIYNVIL 747
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 37/299 (12%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI+ G + T + ++ Q D+ ++ EM G ++ + ++ + K
Sbjct: 311 MIDVGLKPEPITYNALIDGFMRQGDI--EQAFRIKDEMVACGIEANLIIWNTLLNGVCKA 368
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ AL I+ +M G++PD Y++++ G ++ +A EL DE+ L P V TY
Sbjct: 369 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 428
Query: 280 NVYINGLCKQNNVEA-----------GIK------------------------MIACMEE 304
+V INGLC+ N++ G+K ++ M E
Sbjct: 429 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PDV YN+L+ CK + + R + EM + + N TY IDG + G++
Sbjct: 489 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 548
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A E L+ G+ ++ I G C+ G V +A + + + + V + + L+
Sbjct: 549 ADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLI 607
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 142/292 (48%), Gaps = 16/292 (5%)
Query: 148 NRVGFAIEILNCMINDG---FCVDG------KTCSLILSSVCEQRDLSSDELLGFVQEM- 197
N G A +++ C+I + V G ++C+ +SV + S +GF+ E
Sbjct: 106 NWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAV 165
Query: 198 ------KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
K F ++ +++ L+K KV + + M + + PD+ YT +++
Sbjct: 166 NVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAH 225
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ A+ + E+ G P++ TYNV I GLC+ ++ I++ M + G PD+
Sbjct: 226 CKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDL 285
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
TY+ L+ C + + ++ EM G+ TY+ +IDG +GDI +A + +E
Sbjct: 286 YTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDE 345
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+ +++ + G+C+ G + KALE++++M +K V P ++ + L+
Sbjct: 346 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 397
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 137/292 (46%), Gaps = 5/292 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L M G D T ++++ +C+ ++ + L +++ G V Y +
Sbjct: 654 ASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNL--FDDIEGRGLTPNCVTYAAM 711
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K + A +L +M G+ PD Y ++LN +E + KA +LF E+L G
Sbjct: 712 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF 771
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
V ++N I G CK ++ ++ M E P+ +TY +L+ CK + +
Sbjct: 772 ASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKR 830
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM+ + ++ +TY+ ++ G + G++ E L EE + KG+ + I C
Sbjct: 831 LWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYC 890
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ G V +A +L ++ K + ++AL+ + K +F ++L+++I
Sbjct: 891 REGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEV--LKLLNEI 940
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 21/292 (7%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
FI+ ++ +F+ +++LF ++ + GFA + + +G+C GK
Sbjct: 741 FIYNVILNFCCKEEKFEKALDLFQEMLE-----KGFASTVSFNTLIEGYCKSGKL----- 790
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
E ++EM + F V YT++I K + +A + +M+
Sbjct: 791 -----------QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 839
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P YT +L+G + + LF+E++ G+ PD TY V I+ C++ NV
Sbjct: 840 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 899
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K+ + G V Y+ L+QALCK E + +L+ E+ G L L T S++ G
Sbjct: 900 KLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGF 959
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
G++ EA +L + G + ++ + + G + LLKQMA
Sbjct: 960 QIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011
>gi|449451922|ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
gi|449520004|ref|XP_004167024.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
Length = 504
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 6/260 (2%)
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
F + KT +L+L E D++S EL F EM K GF V Y+ I + KK D
Sbjct: 214 FPPNIKTINLLLLGFKESSDITSVEL--FYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVD 271
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
L + +M+ +P + T +++G + +D KA +LFDE+ + L PD+ YN I+
Sbjct: 272 GLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNALIS 331
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
L + +V++ ++ ME + D +TY+ + L ++ ++ EL +M + V
Sbjct: 332 SLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVP 391
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+T +++ + G + KG C S + D + GLC RG+V +A E
Sbjct: 392 KTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECS 451
Query: 405 KQMADKDVSPGARVWEALLL 424
KQM ++ G ++ EA L
Sbjct: 452 KQMLER----GRQMSEAAFL 467
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 18/235 (7%)
Query: 135 SVNLFYK--IPK-FRINRVGFAIEILNCMINDGFCVDG-KTCSLILSSVCEQRDLSSDEL 190
SV LFY I + F+ N V ++I I + G VDG + + + CE + L
Sbjct: 236 SVELFYHEMIKRGFKPNAVTYSIRI-DAYCKKGCFVDGLRVFKEMERAKCEPTLETITTL 294
Query: 191 L---GFVQEMKKL----------GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+ G V++ K C + Y +I SL++ V A ++ M++ I
Sbjct: 295 IHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHI 354
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+ D V Y M+ +G+I ED EL+ +++ VP T + + C+ V+ G+
Sbjct: 355 EHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLG 414
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
A + E G P + L+ LC + + E K+M +G ++ + IM
Sbjct: 415 FWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIM 469
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 158/356 (44%), Gaps = 21/356 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S NC+P Y +I +L ++ Q + ++ + + F + LI +
Sbjct: 194 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVG-QGISPDIFTYTSLIHSL 252
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ ++ L LN MIN D S ++ ++C++ ++
Sbjct: 253 CNLCEWKHVTTL------------------LNQMINSKIMPDVVIFSTVVDALCKEGKIT 294
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E V M G +V Y ++ + ++ +A+ + + M +G P+++ Y
Sbjct: 295 --EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 352
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG + KA LF+E+ L+P+ TYN ++GLC ++ I + M G
Sbjct: 353 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHG 412
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD+ TY LL LCK L+ L+K ++ + ++Q Y+I+IDG+ G++ A
Sbjct: 413 QIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 472
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ +KGL + I GLC+RGL+ +A +L +M SP + +
Sbjct: 473 DIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTI 528
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 14/295 (4%)
Query: 153 AIEILNCMINDGFCVDGKT-CSLI--LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
A + + M+ G D T SLI L ++CE + +++ + +M +V +
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTT-----LLNQMINSKIMPDVVIF 280
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ V+ +L K+ K+ +A +++ M G++P++V Y +++G +Q + +A ++FD ++
Sbjct: 281 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 340
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMI--ACMEELGSKPDVITYNTLLQALCKVREL 327
G P+V +YN ING CK ++ + C +EL P+ +TYNTL+ LC V L
Sbjct: 341 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKEL--IPNTVTYNTLMHGLCHVGRL 398
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
L EM G + +L TY I++D L K + EA LL+ + ++
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 458
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
I G+C+ G + A ++ ++ K + P R + ++ L LD N F+ +
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 513
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 180/382 (47%), Gaps = 27/382 (7%)
Query: 64 LSSLLHSFS-IYNCEPPPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
L L SF+ + + PPP F ++ ++A+ Q+ + S+ + ++ +F P ++
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMD---SFGIPPDVYT 104
Query: 121 --DLIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMI 161
LI ++ +R + ++ KI K + ++G A+ + + MI
Sbjct: 105 LNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMI 164
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
+GF + T +++ +C+ + ++ + ++ M++ +V YT++I SL K +
Sbjct: 165 GEGFQPNVVTYGTLINGLCKVGN--TNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 222
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V +A + ++M GI PDI YT +++ + ++ L ++++ ++PDV ++
Sbjct: 223 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 282
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
++ LCK+ + ++ M G +P+V+TYN L+ C E++ ++ M G
Sbjct: 283 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 342
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
N+ +Y+ +I+G + +A L EE K L + ++ + GLC G ++ A+
Sbjct: 343 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAI 402
Query: 402 ELLKQMADKDVSPGARVWEALL 423
L +M P + LL
Sbjct: 403 ALFHEMVAHGQIPDLATYRILL 424
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 90/168 (53%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+ + EM G + Y ++ L KK + +A+ +L ++ + PDI YT+V+
Sbjct: 400 DAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVI 459
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G+ + A ++F L GL P+V TY + INGLC++ ++ K+ M+ G
Sbjct: 460 DGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCS 519
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
PD TYNT+ Q L + +E R +L++EM +G ++ T +++++ L
Sbjct: 520 PDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 567
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 121/254 (47%), Gaps = 2/254 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ + M+++G+ + + + +++ C+ + + D+ +EM + V Y +
Sbjct: 331 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM--DKATYLFEEMCQKELIPNTVTYNTL 388
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L ++ DA+ + ++M + G PD+ Y ++L+ + + +A L + +
Sbjct: 389 MHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ Y + I+G+C+ +EA + + + G +P+V TY ++ LC+ L+ +
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 508
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM G + TY+ + GL + + A LL+E L +G S + LC
Sbjct: 509 LFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 568
Query: 393 QRGLVRKALELLKQ 406
L + ++L +
Sbjct: 569 DDKLDQSVKQILSE 582
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 147/286 (51%), Gaps = 9/286 (3%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++LN M+ +G D ++I ++ ++ + DE + +MK+ G +V++ +I
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMI--DEAMHIFNKMKQQGLSPDVVNFGALID 421
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L K +V DA+ NQM ++G+ P+I + ++ G+ + + KA+E + E+L G+ P
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP 481
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
DV +N + LC + V ++I ME +G++PDVI+Y TL+ C V ++ + +
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSL 541
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M G+ + TY+ ++ G G I +A G+ E L G+ + + GL
Sbjct: 542 DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTT 601
Query: 395 GLVRKALELLKQMADKDVSPGAR--VW-EALLLSSVSKLDFVNTSF 437
+A EL M ++ G + +W ++L+ +SK + V+ +F
Sbjct: 602 RRFSEAKELYLNM----ITSGKQWNIWIYNIILNGLSKNNCVDEAF 643
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 156/327 (47%), Gaps = 22/327 (6%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILSSV 179
L+K DA R ++++++ K R+ +G +++ N ++ GFC
Sbjct: 135 LLKGLCDAKRLREAMDILIK----RMPELGCTPDVVSYNTLLK-GFC------------- 176
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
E+R + ELL + + + +V Y VI + +V A + +M GI+P
Sbjct: 177 NEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQP 236
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++V YT V++G+ + +AE +F +++ G+ PD TYN I+G + ++M+
Sbjct: 237 NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRML 296
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M G KPD TY +LL LC R M KGI N+ Y I+I G A+K
Sbjct: 297 EEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATK 356
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
G + E LL + GL +F+ ++ ++ +A+ + +M + +SP +
Sbjct: 357 GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNF 416
Query: 420 EALLLSSVSKLDFVNTSFIRLVDQILN 446
A L+ ++ KL V+ + ++ +Q++N
Sbjct: 417 GA-LIDALCKLGRVDDAVLKF-NQMMN 441
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 158/356 (44%), Gaps = 22/356 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT-YADAHRFQDS 135
+P Y +I A ++ +L+ + EN +P+ ++I T YA ++
Sbjct: 340 KPNVAIYGILIHGYATKGALSEMHDLLNLMV--ENGLSPDHHIFNIIFTAYAKKAMIDEA 397
Query: 136 VNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+++F K+ + ++ RV A+ N M+N+G + + ++
Sbjct: 398 MHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C + F EM G +V + ++ +L K +V A +++ M+ G +
Sbjct: 458 LCTVDKWEKAKEFYF--EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD++ YT ++ G + +A + D +L +GL PD +TYN ++G C+ ++ +
Sbjct: 516 PDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M G P V+TY+T+L L R + +EL M G N+ Y+I+++GL+
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ EA L + +K + + F+ I L + G A+ L ++ + P
Sbjct: 636 NNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 2/258 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ EM G +V YT VI L K + V A G+ QM G+KPD Y +
Sbjct: 220 DKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCL 279
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G + + + + +E+ GL PD YTY +N LC M G
Sbjct: 280 IHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGI 339
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KP+V Y L+ L+ + +L+ M G+ + ++I+ A K I EA
Sbjct: 340 KPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
+ + +GL F I LC+ G V A+ QM ++ V+P V+ +L+ L
Sbjct: 400 IFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 426 SVSKLDFVNTSFIRLVDQ 443
+V K + + +++Q
Sbjct: 460 TVDKWEKAKEFYFEMLNQ 477
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ + ++ DA G+ +M +GI P +V Y+ +L+G+ + +A+EL+ ++
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G +++ YN+ +NGL K N V+ K+ + + ++ T+N ++ AL K
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L + G+V ++ TY ++ + L +G + E L G S M + +
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
L RG + +A L ++ +K+ S A A+L+S +S+ ++
Sbjct: 736 RRLLHRGDITRAGAYLSKLDEKNFSLEAST-TAMLISLLSRDEY 778
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 109/235 (46%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E++ ++EM G Y +++ L + +A + M GIKP++ Y +++
Sbjct: 291 EVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILI 350
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G + + +L + ++ GL PD + +N+ K+ ++ + + M++ G
Sbjct: 351 HGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLS 410
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV+ + L+ ALCK+ ++ +M +G+ N+ ++ ++ GL + +A
Sbjct: 411 PDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEF 470
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E LN+G+ F+ +C LC +G V KA L+ M P + L+
Sbjct: 471 YFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLI 525
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 4/283 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G + T + ++ +C+ + + E G Q+M G Y +I +
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAE--GVFQQMIDKGVKPDNDTYNCLIHGYLSI 286
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K + + +L +M + G+KPD Y +LN + +A FD ++ G+ P+V Y
Sbjct: 287 GKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIY 346
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+G + + ++ M E G PD +N + A K ++ + +MK
Sbjct: 347 GILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQ 406
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ ++ + +ID L G + +A + +N+G+ +F+ + GLC K
Sbjct: 407 QGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEK 466
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
A E +M ++ + P + +L + +K + RL+D
Sbjct: 467 AKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ--RLID 507
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 2/236 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ A + L+ M++ G D T + +L C + D+ G +EM + G G+
Sbjct: 531 VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI--DDAYGVFREMLRNGITPGV 588
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ ++ L + +A + M + G + +I Y ++LNG+ +A +LF
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L ++ T+N+ I L K E + + A + G PDV TY + + L +
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
L +L M+ G N + + ++ L +GDI A L + K ++S
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEAS 764
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 35/266 (13%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F M + G + Y +I K + + +LN M +G+ PD + ++
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ +A +F+++ GL PDV + I+ LCK V+ + M G P++
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGI-------------------VLNLQ------ 347
+N+L+ LC V + + +E EM +GI V+ Q
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509
Query: 348 ----------TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+Y+ +I G G I EA L+ L+ GL ++ + G C+ G +
Sbjct: 510 ERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
A + ++M ++PG + +L
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTIL 595
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 42/208 (20%)
Query: 263 LFDELL---VLGLVPDVYTYNVYINGLCKQNNVEAGIK---------------------- 297
LF+ ++ + + PD+ TY++ I C+ +E G
Sbjct: 78 LFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK 137
Query: 298 --------------MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM---KWK 340
+I M ELG PDV++YNTLL+ C + EL+ M + +
Sbjct: 138 GLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
N+ +Y+ +I+G ++G + +A L E +++G+ + I GLC+ +V +A
Sbjct: 198 SCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257
Query: 401 LELLKQMADKDVSPGARVWEALLLSSVS 428
+ +QM DK V P + L+ +S
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLS 285
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 136/273 (49%), Gaps = 4/273 (1%)
Query: 153 AIEILNC-MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYT 210
A E+ C ++ GF +D + +L C R L+ + L M + G C V Y+
Sbjct: 213 AAEMFMCKILKVGFLLDSHIVTSLLLGFC--RGLNLRDALKVFDLMSREGTCAPNSVSYS 270
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I L + ++ +A G+ +QM G +P YT+++ + + KA LFDE++
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIAR 330
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G P+V+TY V I+GLC+ +E + M + G P VITYN L+ CK +
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPA 390
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL+ M+ + N++T++ +++GL G +A LL+ L+ GL ++ I G
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G + A +LL M D+ P + A++
Sbjct: 451 LCREGHMNVAYKLLTSMNSFDLEPDCLTFTAII 483
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 132/262 (50%), Gaps = 3/262 (1%)
Query: 153 AIEILNCMINDGFCV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+++ + M +G C + + S+++ +CE L +E G +M + G YT
Sbjct: 249 ALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL--EEAFGLKDQMGEKGCQPSTRTYTV 306
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I++L + + A + ++M + G KP++ YT++++G+ +A + +++ G
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDG 366
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P V TYN ING CK V +++ ME+ KP+V T+N L++ LC+V + +
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L+K M G+ ++ +Y+++IDGL +G + A LL + L F I
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAF 486
Query: 392 CQRGLVRKALELLKQMADKDVS 413
C++G A L M K +S
Sbjct: 487 CKQGKADVASAFLGLMLRKGIS 508
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 6/239 (2%)
Query: 191 LGFV-----QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
LGF+ + M+ GF GM+DY ++ +L K A + ++ G D T
Sbjct: 175 LGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVT 234
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGL-VPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+L G + A ++FD + G P+ +Y++ I+GLC+ +E + M E
Sbjct: 235 SLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE 294
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G +P TY L++ALC +++ L EM +G N+ TY+++IDGL G I E
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A G+ + + G+ ++ I G C+ G V A ELL M + P R + L+
Sbjct: 355 ANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 150/349 (42%), Gaps = 21/349 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P +Y +I L E + + + D + ++ + + LIK D
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK-GCQPSTRTYTVLIKALCDRGLIDK 319
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ NLF + MI G + T ++++ +C RD +E G
Sbjct: 320 AFNLFDE------------------MIARGCKPNVHTYTVLIDGLC--RDGKIEEANGVC 359
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M K G ++ Y +I K +V A +L M+ KP++ + ++ G+
Sbjct: 360 RKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
KA L +L GL PD+ +YNV I+GLC++ ++ K++ M +PD +T+
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTF 479
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
++ A CK + + + M KGI L+ T + +IDG+ + G +A +LE +
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVK 539
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ T + + L + +++ L +L ++ + P + L+
Sbjct: 540 MRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLV 588
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 160/398 (40%), Gaps = 66/398 (16%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKR---ENFETPEFIFIDLIKTYADAHR 131
C+P Y +IK L + ++ D + R N T + LI +
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHT----YTVLIDGLCRDGK 351
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC-SLILSSVCEQRDLSSDEL 190
+++ + K+ K + + ++ N +IN G+C DG+ + L +V E+R +
Sbjct: 352 IEEANGVCRKMVK---DGIFPSVITYNALIN-GYCKDGRVVPAFELLTVMEKRACKPN-- 405
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ + ++ L + K + A+ +L +M +G+ PDIV Y ++++G
Sbjct: 406 ---------------VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + A +L + L PD T+ IN CKQ + + M G D
Sbjct: 451 LCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 311 VITYNTLLQALCKV----------RELNRLRELV-------------KEMKWK------- 340
+T TL+ +C V L ++R L K K K
Sbjct: 511 EVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLG 570
Query: 341 -----GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
G+V ++ TY+ ++DGL GDI + +LE G + I GLCQ G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVS--KLD 431
V +A +LL M D VSP + ++ V+ KLD
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLD 668
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 23/217 (10%)
Query: 149 RVGFAI-EILNCMINDGFCVDGKT--CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R G ++ E+ + DG C GKT IL ++ + R L++ L + +M
Sbjct: 504 RKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDM-------- 555
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
L K K+ + L +L ++ G+ P +V YT +++G+I D + + +
Sbjct: 556 ----------LSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLE 605
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ + G +P+VY Y + INGLC+ VE K+++ M++ G P+ +TY +++
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG--LASKG 360
+L+R E V+ M +G LN + YS ++ G L+ KG
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKG 702
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A+ +L M+++G D + ++++ +C + ++ L + M
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKL--LTSMNSFDLEPD 475
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I + K+ K A L M GI D V T +++GV A + +
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILE 535
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L+ + ++ ++ NV ++ L K ++ + M+ + +LG P V+TY TL+ L +
Sbjct: 536 TLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ +++ MK G + N+ Y+I+I+GL G + EA LL + G+ +
Sbjct: 596 DISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G G + +ALE ++ M ++ R++ +LL
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 16/248 (6%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + I+++ C+Q +D F+ M + G V T +I + K DAL
Sbjct: 475 DCLTFTAIINAFCKQG--KADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALF 532
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG------LVPDVYTYNV 281
IL + +K ++ LN ++ + K +L +EL +LG LVP V TY
Sbjct: 533 ILETL----VKMRMLTTPHSLN--VILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTT 586
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
++GL + ++ +M+ M+ G P+V Y ++ LC+ + +L+ M+ G
Sbjct: 587 LVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG--LCQRGLVRK 399
+ N TY++M+ G + G + A + + +G ++ + G L Q+G+
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRET 706
Query: 400 ALELLKQM 407
E +K++
Sbjct: 707 DPECIKEL 714
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 1/189 (0%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G + + CY+ +L + + A + + G V + Y +N LCK EA
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL-NLQTYSIMID 354
+ + ++G D +LL C+ L ++ M +G N +YSI+I
Sbjct: 215 EMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIH 274
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL G + EA GL ++ KG + + I LC RGL+ KA L +M + P
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKP 334
Query: 415 GARVWEALL 423
+ L+
Sbjct: 335 NVHTYTVLI 343
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 74/400 (18%), Positives = 164/400 (41%), Gaps = 57/400 (14%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S + ++ EP + +I + + D++S + R+ E LI
Sbjct: 463 LLTSMNSFDLEPDCLTFTAIINAFCKQGK-ADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEIL------NCMINDGFCVDGKTCSL-ILSSV 179
+ + +D++ + + K R+ ++ ++ C + + + GK L ++ SV
Sbjct: 522 CNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSV 581
Query: 180 CEQRDL-----SSDELLGFVQ--EMKKLGFCFGMV-DYTNVIRSLVKKEKVFDALGILNQ 231
L S ++ G + E+ KL C V YT +I L + +V +A +L+
Sbjct: 582 VTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC---- 287
M+ G+ P+ V YT+++ G + +A E ++ G + Y+ + G
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQK 701
Query: 288 --KQNNVEAGIKMIACMEELGSKPDVI--------------------------------- 312
++ + E ++I+ +E+LG +
Sbjct: 702 GIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEK 761
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
+ ++++ C ++ + EL+ + G V + +++ ++I GL +GD A L+ E
Sbjct: 762 AIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMEL 821
Query: 373 L-NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
L + G+ +S + C L + G + ++L+ Q+ ++
Sbjct: 822 LTSNGVVEKSGVLPYVEC-LMETGDCSEVIDLVDQLHSRE 860
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 188/436 (43%), Gaps = 77/436 (17%)
Query: 61 PHILSSLLH-------SFSIYNCEPP-----PEAYHFVIKTLAENSQFCDISSVLDHIEK 108
PH L+SL+ S I++ P P+ H + L+ +F + S+L H+
Sbjct: 56 PHNLASLISRQHDPDLSLQIFHHAHPSLSHAPQPLHALFLKLSRARRFYHLESLLTHLPN 115
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVD 168
LI+ Y A + ++ +F K + LN ++N V
Sbjct: 116 PPPEPP----LTTLIRAYGLAGKPLSALRIFLKFQPL-------GVRSLNALLNA--LVQ 162
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
K L S F +K +V ++++L K+ +V A+ +
Sbjct: 163 NKRHRLAHSV--------------FKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRV 208
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
L++M G+ P++V Y+ VL G + + D A +F E+L G +PDV +Y V ++G C+
Sbjct: 209 LDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCR 268
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM----------- 337
+ I+M+ MEE +P +TY +++A CK R+ L+++M
Sbjct: 269 LGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVL 328
Query: 338 -------------------KWKGIV-----LNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
W+G+V + S ++ L +G ++EA G+L+E L
Sbjct: 329 CCKVVDLLCEEGSVERACEVWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDE-L 387
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
KG ++ I G+C+RG + +A L +M +K P A + +L+ K+ V
Sbjct: 388 EKGEVASLMTYNTLIAGMCERGQLCEAGRLWDEMVEKGRVPNAFTYN-VLMKGFCKVGDV 446
Query: 434 NTSFIRLVDQILNTPC 449
+ IR++++++ + C
Sbjct: 447 KEA-IRVLEEMVESGC 461
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 67/275 (24%)
Query: 94 SQFCDISSVLDHIEK----RENFETP-EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRIN 148
S FC + ++D I EN P E + +I+ Y + ++VNL
Sbjct: 264 SGFCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVNL---------- 313
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL--SSDELLGFVQEMKKLGFCFGM 206
L M+ G C ++ +CE+ + + + G V++ G+ G
Sbjct: 314 --------LEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGVVRK----GWRVGG 361
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ ++ L K+ KV +A G+L++++
Sbjct: 362 AVVSTIVHWLCKEGKVVEARGVLDELEK-------------------------------- 389
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNV-EAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
G V + TYN I G+C++ + EAG ++ M E G P+ TYN L++ CKV
Sbjct: 390 ----GEVASLMTYNTLIAGMCERGQLCEAG-RLWDEMVEKGRVPNAFTYNVLMKGFCKVG 444
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
++ +++EM G + N T+SI++DG++ G
Sbjct: 445 DVKEAIRVLEEMVESGCLPNKSTFSILVDGISLSG 479
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R A ++ N M G ++ + +L + RD E G + M G
Sbjct: 158 RARMTATAHKVFNEMGRAGVAMNTHVYNAMLHVCLKARDALRAE--GLMTRMDAAGVPLD 215
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ VI V+K ++A+ + +M+ +G++PDIV + V++G+ + +A +L
Sbjct: 216 RFSFNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRT 275
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ + PD TY ++G C+ +V +K+ ME G P V TYN +++ LC+
Sbjct: 276 DMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDG 335
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + L+ EM + + + T + +I+ A +GD+ AC + + + GL +
Sbjct: 336 KMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYK 395
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ + +A E L +M + SP V+ L+
Sbjct: 396 ALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLV 433
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ M+ G +V + VI L K+ ++ +A + M + ++PD V YT +++G
Sbjct: 240 ERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRI 299
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLC--------------------------- 287
D +A +L +E+ G+VP V TYN I LC
Sbjct: 300 GDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTC 359
Query: 288 --------KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
K+ ++ + K+ M E G + D TY L+ CK +EL+ +E + EM
Sbjct: 360 NTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMG 419
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G N +S ++DG K + + +E + +GL S++ I LC++GLV
Sbjct: 420 RGFSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRLCKKGLVDL 479
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVS 428
A ++L QM K + V+ L + ++
Sbjct: 480 AQKVLHQMQGKGLEVDCLVYATLAYAHLT 508
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 101/217 (46%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M+ G T ++ +L + A + N+M G+ + Y +L+ +
Sbjct: 136 QMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAMLHVCLKAR 195
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
D ++AE L + G+ D +++N I ++ + + M++ G +PD++T+N
Sbjct: 196 DALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTWN 255
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
T++ LCK + +L +M + + TY+ ++DG GD+ EA L EE
Sbjct: 256 TVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAG 315
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G+ + ++ I LC+ G +++ LL +M + V
Sbjct: 316 GMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKV 352
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 112/240 (46%), Gaps = 2/240 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI VG A+++ M G T + I+ +CE D E+ G + EM
Sbjct: 298 RIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCE--DGKMKEVNGLLSEMDGRKVQAD 355
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +I S K+ + A + +M G++ D Y +++G ++ +A+E
Sbjct: 356 HVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALF 415
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G P+ ++ ++G CK+NN +A + + + + G PD Y +L++ LCK
Sbjct: 416 EMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRLCKKG 475
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ ++++ +M+ KG+ ++ Y+ + + G + A +L E K + +++
Sbjct: 476 LVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAASDILNEMARKQMSVTPQIYN 535
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A +FD++ GL PD + + L + K+ M G + YN +L
Sbjct: 130 AARVFDQMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAMLH 189
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
K R+ R L+ M G+ L+ +++ +I KG EA + E ++G+
Sbjct: 190 VCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQDEGVEP 249
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GLC+ G +++A +L M V P + L+
Sbjct: 250 DIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLV 293
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 137/275 (49%), Gaps = 18/275 (6%)
Query: 162 NDGFCVDGKTCSLILS-SVCEQRDLSSDELLGFVQEMKKLGFCFGMV----------DYT 210
DG C G+ CS + S S C +L + LL FV + FG++ +
Sbjct: 107 GDGACA-GEVCSPLPSLSSC---NLLLESLL-FVGRHADVRAAFGLLVAAGARPDTFAWN 161
Query: 211 NVIRSLVKKEKVFDALGILNQM-KSDGIKP-DIVCYTMVLNGVIVQEDYVKAEELFDELL 268
V+++ V + AL +L +M +S+G P D Y +V+ G+ A ++FDE++
Sbjct: 162 KVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMV 221
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+G+ P+ TYN I+G K ++EAG ++ M G KP+V+TYN LL LC+ ++
Sbjct: 222 DMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMD 281
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R L+ EM ++ + TYSI+ DGL G+ L E+L KG+ + +
Sbjct: 282 ETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILL 341
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G V KA ++ + + + P ++ L+
Sbjct: 342 NGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 161/356 (45%), Gaps = 23/356 (6%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
PPP+A Y+ VI L + + D V D E + P I + T D H
Sbjct: 190 PPPDAFSYNVVIAGLWRSGKGSDALKVFD--EMVDMGVAPNRITYN---TMIDGHVKGGD 244
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+ GF + + M++DG + T +++LS +C R DE +
Sbjct: 245 L------------EAGFRLR--DQMLHDGPKPNVVTYNVLLSGLC--RTGRMDETRALMD 288
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM Y+ + L + + L + + G+ +++LNG+
Sbjct: 289 EMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 348
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
KA+++F+ L+ GLVP YN ING C+ ++ + M+ +PD ITYN
Sbjct: 349 KVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 408
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ LCK+ + + +LV EM+ G+ +++T++ +ID + G + + +L + K
Sbjct: 409 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
G+ + F + C+ G + +A+ +L M KDV+P A+V+ +++ + + D
Sbjct: 469 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + TCS++L+ +C+ ++ + + + + G V Y +I + +
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAKQV--FEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A I QMKS I+PD + Y ++NG+ E KAE+L E+ G+ P V T+N I
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ +E +++ M++ G K DVI++ ++++A CK ++ ++ +M +K +
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N Q Y+ +ID GD +A L+E+ N G+ ++ + GLC+ + +A EL
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLD 431
+ + ++ + P + ++ + +K D
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISACCNKGD 594
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 7/231 (3%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y VI L + K DAL + ++M G+ P+ + Y +++G + D L D++L
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK---PDVITYNTLLQALCKVR 325
G P+V TYNV ++GLC+ ++ + A M+E+ S PD TY+ L L +
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMD---ETRALMDEMASHSMLPDGFTYSILFDGLTRTG 313
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E + L E KG++L T SI+++GL G + +A + E ++ GL + +++
Sbjct: 314 ESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYN 373
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
I G CQ +R A + +QM + + P + A L++ + KL+ V +
Sbjct: 374 TLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNA-LINGLCKLEMVTKA 423
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 119/225 (52%), Gaps = 10/225 (4%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ +M++ G ++ + +V+++ K K+ +A+ IL+ M + P+ Y +++ I
Sbjct: 462 LSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIE 521
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D +A L +++ G+ + TYN+ + GLC+ + ++ ++I + G +PDV++
Sbjct: 522 SGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 581
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNT++ A C + ++ EL++EM GI L+T ++ LAS G + + L ++ L
Sbjct: 582 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQML 641
Query: 374 NKGLCTQSSMFDETICGLCQRGLVR-----KALELLKQMADKDVS 413
+K + SS++ G+ VR K L K+M++K ++
Sbjct: 642 HKNVEPSSSIY-----GIMVDAYVRCENDSKVASLKKEMSEKGIA 681
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 119/252 (47%), Gaps = 2/252 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + +++ +C+ ++ E L V EM+K G + + +I + ++
Sbjct: 403 DHITYNALINGLCKLEMVTKAEDL--VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 460
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L+ M+ GIK D++ + V+ +A + D+++ + P+ YN I+
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ + E + ++ M+ G ++TYN LL+ LC+ +++ EL+ ++ +G+ ++
Sbjct: 521 ESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+Y+ +I +KGD +A LL+E G+ + L G V L +QM
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640
Query: 408 ADKDVSPGARVW 419
K+V P + ++
Sbjct: 641 LHKNVEPSSSIY 652
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ IL+ MI + + + I+ + E D +++ L V++MK G +V Y +
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGD--TEQALLLVEKMKNSGVSASIVTYNLL 550
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
++ L + ++ +A ++ +++ G++PD+V Y +++ + D KA EL E+ G+
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P + T + ++ L V + M +P Y ++ A + +++
Sbjct: 611 RPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670
Query: 333 LVKEMKWKGIVLN 345
L KEM KGI +
Sbjct: 671 LKKEMSEKGIAFD 683
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 118/235 (50%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +EM++ +V + ++ SL K K+ +A + + M G P++ YT++L
Sbjct: 307 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIML 366
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG + V +LFD +L G+ PD+YT+NV I ++ + + M + G K
Sbjct: 367 NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV+TY T++ ALC++ +++ E +M +G+ + Y +I G + G +++A L
Sbjct: 427 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E +N G+ F I LC+ G V A + + + P A V+ L+
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 136/275 (49%), Gaps = 6/275 (2%)
Query: 173 SLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILN 230
S++L S+C+Q + +D+LL + E + C +V Y+ VI K+ V A +
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEGGAV--CSPDVVAYSTVIDGFFKEGDVNKACDLFK 243
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M GI PD V Y+ V++ + KAE +++ G++P+ +TYN I G
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ +++ M PDV+T + L+ +LCK ++ R++ M KG N+ +Y+
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYT 363
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
IM++G A+KG +++ L + L G+ F+ I G++ KA+ + +M D
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 411 DVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
V P + ++ L + K+D F +++DQ
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI ++ A+E N MI+ G D ++ C L + L + E+ G
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL--ISEIMNNGMHLD 498
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++++I +L K +V DA I + + G+ P V Y+M+++G + KA +FD
Sbjct: 499 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+ Y +NG CK ++ G+ + M + G KP I YN ++ L +
Sbjct: 559 AMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ EM GI +N TY+I++ GL EA L +E + +
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I G+ Q V +A +L ++ + P
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSGLVP 707
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + M D T S+++ S+C+ + E M G + YT +
Sbjct: 308 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK--EARDVFDTMAMKGQNPNVFSYTIM 365
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K + D + + M DGI PDI + +++ KA +F+E+ G+
Sbjct: 366 LNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 425
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY I LC+ ++ ++ M + G PD Y+ L+Q C L + +E
Sbjct: 426 KPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKE 485
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ E+ G+ L++ +S +I+ L G +++A + + +N GL + ++ + G C
Sbjct: 486 LISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYC 545
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + KAL + M + P V+ L+
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 2/259 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++ + M+ DG D T ++++ + L D+ + EM+ G +V Y VI
Sbjct: 380 DLFDLMLGDGIAPDIYTFNVLIKAYANCGML--DKAMIIFNEMRDHGVKPDVVTYRTVIA 437
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L + K+ DA+ NQM G+ PD Y ++ G +KA+EL E++ G+
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHL 497
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D+ ++ IN LCK V + +G P + Y+ L+ C V ++ + +
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M GI N Y +++G G I E L E L KG+ + +++ I GL +
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617
Query: 395 GLVRKALELLKQMADKDVS 413
G A +M + ++
Sbjct: 618 GRTVPAKVKFHEMTESGIA 636
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 137/336 (40%), Gaps = 21/336 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AYH +I+ + ++ I F +I R D+ N
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEI-MNNGMHLDIVFFSSIINNLCKLGRVMDAQN 520
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+F +N ++ M+ DG+C+ GK ++ L M
Sbjct: 521 IF----DLTVNVGLHPTAVVYSMLMDGYCLVGKM----------------EKALRVFDAM 560
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
G V Y ++ K ++ + L + +M GIKP + Y ++++G+
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 620
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
V A+ F E+ G+ + TYN+ + GL K + I + + + K ++IT NT+
Sbjct: 621 VPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ + + R + ++L + G+V + TYSIMI L +G + EA + N G
Sbjct: 681 IAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 740
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
S + + + L ++ + +A L ++ +++ S
Sbjct: 741 EPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G Y V+R L K +A+ + ++++ +K +I+ ++ G+
Sbjct: 628 HEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQT 687
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A++LF + GLVP V TY++ I L K+ VE M + M+ G +PD
Sbjct: 688 RRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 747
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
N +++ L K E+ R + ++ + L T +++D +SKG
Sbjct: 748 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 168/358 (46%), Gaps = 30/358 (8%)
Query: 65 SSLLHSFSIYNCEPPP-----EAYHFVIKTLAENSQFCDISSVLDHIEKREN--FETPEF 117
+L + F ++ + P E Y +IK L + QF + ++++ + +REN F +P +
Sbjct: 135 GNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEM-RRENPQFVSP-Y 192
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+F+ L++ +A A + ++ + ++PK+ + C++ D C +G
Sbjct: 193 VFVVLMRRFASARMVKKAIEVLDEMPKYGCEP---DEHVFGCLL-DALCKNG-------- 240
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
SV E L D + F +K +T+++ ++ K+ +A +L Q++ G
Sbjct: 241 SVKEAASLFEDMRIRFTPTLK---------HFTSLLYGWCREGKLMEAKYVLVQIREAGF 291
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+PDIV Y +L G V A +L E+ P+V ++ I LC + +E ++
Sbjct: 292 EPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMR 351
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M+ G D +TY TL+ CK ++++ EL+ M +G + N TY ++
Sbjct: 352 VFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHE 411
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
K ++ E L+EE G ++++ I C+ G +++ + + +M +SPG
Sbjct: 412 KKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPG 469
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 156/398 (39%), Gaps = 73/398 (18%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y CEP + ++ L +N + +S+ + + R F F L+ + +
Sbjct: 220 YGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIR--FTPTLKHFTSLLYGWCREGKLM 277
Query: 134 DSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGK--------------------- 170
++ K +I GF +I+ N ++ G+ GK
Sbjct: 278 EA-----KYVLVQIREAGFEPDIVVYNNLLT-GYAAAGKMVDAYDLLKEMRRKECEPNVM 331
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+ + ++ ++C ++ + +E + EM+ G V YT +I K K+ +L+
Sbjct: 332 SFTTLIQALCAKKKM--EEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLD 389
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M G P+ + Y ++ +E+ + EL +E+ +G PD+ YN+ I CK
Sbjct: 390 NMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLG 449
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV------- 343
++ G+++ ME G P + T+ ++ R L E KEM +G++
Sbjct: 450 EIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGT 509
Query: 344 ------------------------------LNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
LN+ ++I I L S G + EAC + +
Sbjct: 510 LKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMM 569
Query: 374 NKGLCTQSSMFDETICGLCQ---RGLVRKALELLKQMA 408
+ G+ Q F + + GL + R + + E +++MA
Sbjct: 570 DAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKVRKMA 607
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 180/416 (43%), Gaps = 30/416 (7%)
Query: 34 DQQQAKQNVKQSLTTPP----TKQQQQIPKQPHILSSLLHSFSIYNCEPP-----PEAYH 84
D + +++ SLTT T +Q+ K+ L F ++ P E+YH
Sbjct: 53 DHRNPHHDLELSLTTYSSHISTTLVEQVLKRCKNLGFSAQRFFLWAKRIPGFDHSKESYH 112
Query: 85 FVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK 144
++ L + QF + L I + ++FE +F + + Y+ A+ D++ F ++ +
Sbjct: 113 ILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMVE 172
Query: 145 FRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
F + A +I + + F KT S+++ + + S
Sbjct: 173 FGLKPTIDDLDQLLYVLCKRKHAKHAQQIFD-RVKHQFQTRAKTYSILVRGWGDIGE--S 229
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
EM++ ++ Y +++ + K KV +A + +M S+GIKPD +++
Sbjct: 230 VSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIF 289
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ D A + DE+ LVP+V+TYN I LCK+ VE +++ + E
Sbjct: 290 IRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSG 349
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD +YN +L C+ E+N L+ M + + +Y++++ L G A
Sbjct: 350 QPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIE 409
Query: 368 LLEEALNKGLCTQSSMFDETICGLC-QRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ E KG S + + GLC ++G + +A + + M D+ + P + E L
Sbjct: 410 VWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEIL 465
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 4/250 (1%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+L SD + F M + G + D ++ L K++ A I +++K +
Sbjct: 158 NLPSDAIRAF-DRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQ-FQTRAKT 215
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y++++ G + V A ++FDE+ DV YN + CK V KM M
Sbjct: 216 YSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMG 275
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G KPD T++ ++A C+ +++ ++ EMK +V N+ TY+ MI L K +
Sbjct: 276 SNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVE 335
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL- 422
EA LL E + + + ++ + C+ V A L+ +M + P + L
Sbjct: 336 EAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLL 395
Query: 423 -LLSSVSKLD 431
LL V + D
Sbjct: 396 KLLIRVGRFD 405
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 168/362 (46%), Gaps = 25/362 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+L+ + C+P Y VI L + + ++L+ +EK + E I+ +I
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYNTIIDG 259
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIE-ILNCMINDGFCVDGKTCSLILSSVCEQRD 184
D+ +LF K+ I F +++C+ N G D S +LS + E ++
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA---SRLLSDMLE-KN 315
Query: 185 LSSDELL------GFVQE------------MKKLGFCF-GMVDYTNVIRSLVKKEKVFDA 225
++ D + FV+E M K CF +V Y +I+ K ++V +
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ + +M G+ + V YT +++G D A+ +F +++ G+ PD+ TYN+ ++G
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LC NVE + + M++ K D++TY T+++ALCK ++ +L + KG+ N
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ TY+ M+ G KG EA L E G S ++ I + G + EL+K
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIK 555
Query: 406 QM 407
+M
Sbjct: 556 EM 557
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 3/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ IL M+ G+ T + +L+ C +S E + V +M ++G+
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS--EAVALVDQMVEMGYQPD 179
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T ++ L + K +A+ ++ +M G +PD+V Y V+NG+ + + A L +
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 239
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV YN I+GLCK +++ + ME G KPDV TYN L+ LC
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-F 384
+ L+ +M K I +L ++ +ID +G ++EA L +E + C + +
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G C+ V + +E+ ++M+ + + + L+
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 134/262 (51%), Gaps = 2/262 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N G + T S+ ++ C + LS L + +M KLG+
Sbjct: 87 KMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSL--ALAILGKMMKLGYGPS 144
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +++ ++ +A+ +++QM G +PD V +T +++G+ +A L +
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++V G PD+ TY INGLCK+ + + ++ ME+ + DV+ YNT++ LCK +
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L +M+ KGI ++ TY+ +I L + G +A LL + L K + F+
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 386 ETICGLCQRGLVRKALELLKQM 407
I + G + +A +L +M
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEM 346
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +LS++ + D ++ ++M+ LG + Y+ I ++ ++ AL IL +M
Sbjct: 79 SKLLSAIAKMNKF--DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKM 136
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G P IV +LNG +A L D+++ +G PD T+ ++GL + N
Sbjct: 137 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M G +PD++TY ++ LCK E + L+ +M+ I ++ Y+ +
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDGL + +A L + KG+ ++ I LC G A LL M +K++
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
+P + AL+ + V + V +L D+++ +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAE--KLYDEMVKS 349
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 117/241 (48%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
+DL D+ +G +M K +V+++ ++ ++ K K + + QM++ GI ++
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y++ +N + A + +++ LG P + T N +NG C N + + ++ M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E+G +PD +T+ TL+ L + + + LV+ M KG +L TY +I+GL +G+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A LL + + +++ I GLC+ + A +L +M K + P + L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 423 L 423
+
Sbjct: 292 I 292
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 145/343 (42%), Gaps = 21/343 (6%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIF 119
+P + +LL+ E Y+ +I L + D + + +E + + F +
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTY 288
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRIN-RVGFAIEILNCMINDGFCVDG--------- 169
LI + R+ D+ L + + IN + F +++ + +G V+
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 170 -KTC-------SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
K C + ++ C+ + + +E + +EM + G V YT +I +
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRV--EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+A + QM SDG+ PDI+ Y ++L+G+ + A +F+ + + D+ TY
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I LCK VE G + + G KP+V+TY T++ C+ L EMK G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ N TY+ +I GD + L++E + G +S F
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
N+ R +++ K+ DA+G+ M P IV ++ +L+ + + L +++ L
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ ++YTY+++IN C+++ + + ++ M +LG P ++T N+LL C ++
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
LV +M G + T++ ++ GL EA L+E + KG + I G
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+RG AL LL +M + ++ ++
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 134/313 (42%), Gaps = 31/313 (9%)
Query: 70 SFSIYN------CEPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFID- 121
+F ++N +P Y+ +I L ++ D S +L D +EK N P+ +F +
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN---PDLVFFNA 325
Query: 122 LIKTYA-----------------DAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMIND 163
LI + H F D V I F + RV +E+ M
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + T + ++ + RD + +++ ++M G ++ Y ++ L V
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMV--FKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
AL + M+ +K DIV YT ++ + +LF L + G+ P+V TY +
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G C++ E + M+E G P+ TYNTL++A + + EL+KEM+ G
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA 563
Query: 344 LNLQTYSIMIDGL 356
+ T+ ++ + L
Sbjct: 564 GDASTFGLVTNML 576
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI +G D TCS IL C L+ +L +EM ++G V Y +I SL K
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL--FREMYEMGLDPNHVSYATIINSLFKS 404
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A + +QM GI DIV T V++G+ +AEE+F+ +L L L P+ TY
Sbjct: 405 GRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTY 464
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ++G CK +E ++ ME+ P+VIT+++++ K L++ ++++EM
Sbjct: 465 SALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQ 524
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ ++ N Y+I+IDG G+ A +E ++ L + +FD + L + G + +
Sbjct: 525 RNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDE 584
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L+ M K + P + +L+
Sbjct: 585 ARSLIIDMYSKGIDPDIVNYASLI 608
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV--- 251
M +LG + Y +I + K K DAL ILN+MKS GI P+ V Y +++ G+
Sbjct: 659 SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT 718
Query: 252 ----------IVQEDYVKAEE-----------------------LFDELLVLGLVPDVYT 278
+ + Y ++E+ + DE++ G+ D+ T
Sbjct: 719 GFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVT 778
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV----RELNRLRELV 334
YN I G C ++VE +K + M G P++ TYNTLL L + +LV
Sbjct: 779 YNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLV 838
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
EM +G+V N TY I++ G G+ + L E + KG ++ I +
Sbjct: 839 SEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKS 898
Query: 395 GLVRKALELLKQMADKDVSPGARVWEAL 422
G + +A ELL + K P + ++ L
Sbjct: 899 GKMIEARELLNDLLTKGRIPNSFTYDIL 926
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 156/377 (41%), Gaps = 57/377 (15%)
Query: 102 VLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNC 159
VL +EK E+ F +I YA +V++ ++ + + N + +AI I
Sbjct: 483 VLQKMEK-EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGY 541
Query: 160 M------INDGFCVDGKTCSLILSSVC-------EQRDLSSDELLGFVQEMKKLGFCFGM 206
+ D FC + K+ L S+V +R DE + +M G +
Sbjct: 542 FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDI 601
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V+Y ++I K+ AL I+ +MK I+ D+V Y ++ G++ Y +
Sbjct: 602 VNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSR 660
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR- 325
++ LGL PD TYN IN C + E + ++ M+ G P+ +TYN L+ LCK
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGF 720
Query: 326 -----------------------------------ELNRLRELVKEMKWKGIVLNLQTYS 350
EL R + ++ EM +GI +L TY+
Sbjct: 721 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYN 780
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL----VRKALELLKQ 406
+I G + + +A + G+ + ++ + GL GL + + +L+ +
Sbjct: 781 ALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSE 840
Query: 407 MADKDVSPGARVWEALL 423
M ++ + P A ++ L+
Sbjct: 841 MNERGLVPNAATYDILV 857
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 17/274 (6%)
Query: 167 VDGKTCSLILSSVCEQRDLSS-----DELLGFVQEMKKL------------GFCFGMVDY 209
+D T + +L + C+ DL+ +E+LGF ++ +L +V Y
Sbjct: 265 IDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTY 324
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +I + K V ++ + +M +GI PD+V + +L G +A LF E+
Sbjct: 325 TTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE 384
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+GL P+ +Y IN L K V + + M G D++T T++ L KV +
Sbjct: 385 MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
E+ + + + N TYS ++DG G + A +L++ + + F I
Sbjct: 445 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 504
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G ++G++ KA+++L++M ++V P V+ L+
Sbjct: 505 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILI 538
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 187/477 (39%), Gaps = 100/477 (20%)
Query: 33 LDQQQAKQNVKQSLTTPPTKQQQQIPKQP--HILSSLLHSFSIYNCEPPPEAYHFV---- 86
L + + + N +PPT+ ++ P SS +H SI+ PP + + +V
Sbjct: 6 LKKIRVQTNTLIFFFSPPTRLRRFFYPTPITRTFSSQIHKDSIF--IPPTKTHLYVSFFC 63
Query: 87 --IKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK--- 141
I+ + +F S+ H+ R P F + + +A V L Y
Sbjct: 64 TLIRLYLTHDRFSTASATFSHM--RALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121
Query: 142 ----IPK-FRIN-------RVG---FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+P F +N +VG A+ L ND +D T + ++ C++ +
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLV- 178
Query: 187 SDELLGFVQEMKKLGFCF---------------GMVDYTN-VIRSLVKKEKVFDALG--- 227
D+ G + EM K G CF G+V Y V+ +LV D +G
Sbjct: 179 -DQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT 237
Query: 228 -----------------ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-- 268
I N +SD +K DIV Y +L D +AE LF+E+L
Sbjct: 238 LIDGYCEAVLMSQATELIENSWRSD-VKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296
Query: 269 -----------------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ L P + TY I CK VE + M G PDV
Sbjct: 297 WKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDV 356
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+T +++L C+ +L L +EM G+ N +Y+ +I+ L G ++EA L +
Sbjct: 357 VTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQ 416
Query: 372 ALNKGLCTQSSMFDETIC-----GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +G+ FD C GL + G ++A E+ + + +++P + ALL
Sbjct: 417 MVVRGIS-----FDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALL 468
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 21/313 (6%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCV 167
K EN E I + + + Y HR DS+ +F+K+ F +
Sbjct: 78 KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDP------------------ 119
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA-L 226
K +L+ + E+ L + F + M+++G + +I++L + + DA L
Sbjct: 120 SQKAYVTVLAILVEENQL--NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
I +M G PD Y +++G+ +A++LF E++ P V TY INGL
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C NV+ ++ + M+ G +P+V TY++L+ LCK + EL + M +G N+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +I GL + I EA LL+ +GL + ++ + I G C R+A L +
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 407 MADKDVSPGARVW 419
M ++P W
Sbjct: 358 MILGGITPNRLTW 370
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 162/370 (43%), Gaps = 28/370 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ H ++C+P +AY V+ L E +Q ++ + I L T
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMRE-----------IGLPPTV 156
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A S+N+ K V ++I M G D T ++S +C R
Sbjct: 157 A-------SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLC--RFGR 207
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE EM + +V YT++I L + V +A+ L +MKS GI+P++ Y+
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ ++A ELF+ ++ G P++ TY I GLCK+ ++ ++++ M G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI-------MIDGLASK 359
KPD Y ++ C + + + EM GI N T++I ++ GL +
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN 387
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
A L ++G+ + + + LC++G +KA++L+ ++ P W
Sbjct: 388 YP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTW 446
Query: 420 EALLLSSVSK 429
+ L+ ++ K
Sbjct: 447 KLLIGHTLDK 456
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 149/301 (49%), Gaps = 4/301 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M+ G+ + T + ++ +C ++ + F++ ++ + + YT++
Sbjct: 320 AFEMLEEMVKKGWKPNVYTHTALIDGLC-KKGWTEKAFRLFLKLVRSDDYKPNVHTYTSM 378
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K++K+ A +L++MK G+ P+ YT +++G ++ KA EL D + G
Sbjct: 379 IHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGF 438
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+++TYN +I+ LCK+ K++ LG + D +TY L+ LC+ +
Sbjct: 439 SANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALV 498
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+M G+ ++ TY+ +I + + + E+ L EA+ GL + ICG C
Sbjct: 499 FFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYC 558
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ V AL+ +M+D +P + + AL+ L SKLD + +VD+ L +PC+
Sbjct: 559 RDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGL-SPCE 617
Query: 451 M 451
+
Sbjct: 618 V 618
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 149/387 (38%), Gaps = 91/387 (23%)
Query: 110 ENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDG 169
ENFE + +++ +A+ +FQ++VN+ ++ + + + LNC V G
Sbjct: 155 ENFERAHEVMDCMVRVFAEIGKFQEAVNMVIEMEN---HGLVLTVRTLNC-------VTG 204
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+ L E EM+ G C V Y + + + ++ D L
Sbjct: 205 VAGEMGLVGYAEN----------VFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWL 254
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M G D T++++ + + FD+ + LGL P++ + INGLCK+
Sbjct: 255 KDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKR 314
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCK--------------VR---------- 325
+++ +M+ M + G KP+V T+ L+ LCK VR
Sbjct: 315 GSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHT 374
Query: 326 ------------ELNRLRELVKEMKWKGIVLNLQTYSIMIDG------------------ 355
+LNR L+ MK +G+V N +TY+ +IDG
Sbjct: 375 YTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMG 434
Query: 356 -----------------LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
L KG +EAC LL++ GL + + I LC+R R
Sbjct: 435 KEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTR 494
Query: 399 KALELLKQMADKDVSPGARVWEALLLS 425
+AL +M V P + L+ +
Sbjct: 495 EALVFFSKMFKAGVQPDMHTYNTLIAA 521
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 43/209 (20%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELL--GFVQEMKKLGFCFGMVDY 209
A E+++ M +GF + T + + S+C++ R L + +LL GF +LG V Y
Sbjct: 426 AYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGF-----RLGLQADTVTY 480
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +I L ++ +AL ++M G++PD+ Y ++ Q ++E+LF E +
Sbjct: 481 TILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVG 540
Query: 270 LGLVP-----------------------------------DVYTYNVYINGLCKQNNVEA 294
LGLVP D TY I+GLCK++ ++
Sbjct: 541 LGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDE 600
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCK 323
++ M + G P +T TL CK
Sbjct: 601 ACQLYEAMVDKGLSPCEVTRLTLAYEYCK 629
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 138/282 (48%), Gaps = 7/282 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR--DLSSDELLGFVQEMKKLGF 202
FR +V A+EI N MI G D K C+ ++ +C R DL+ + + +E+K
Sbjct: 160 FRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV---AEEIKSARV 216
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V Y +I K ++ A + + M G +PD+V Y ++LN +AE
Sbjct: 217 KLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEG 276
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK-MIACMEELGSKPDVITYNTLLQAL 321
+ E++ G+ D Y+YN + C+ ++ + M+ ME G DV++Y+TL++
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETF 335
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ + L +EM+ KG+V+N+ TY+ +I +G+ A LL++ GL
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + LC+ G V KA + M + +++P A + +L+
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 1/237 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D + EM+ + DY I LV++ + A I MK G Y+
Sbjct: 26 DNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRF 85
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G+ + + + L ++ LG +PD++ +NVY++ LC++N V ++ CM + G
Sbjct: 86 ISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGR 145
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDV++Y L+ L + ++ E+ M G+ + + + ++ GL + A
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 368 LLEEALNKGLCTQSS-MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ E + S+ +++ I G C+ G + KA L M+ P + LL
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 106/217 (48%), Gaps = 3/217 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDEL 267
Y + I +LVK + +A+ + ++M+ + Y + GV+V+E + AE ++ ++
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFI-GVLVRESRFELAEAIYWDM 70
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+G +TY+ +I+GLCK + +++ ME LG PD+ +N L LC+ ++
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ M +G ++ +Y+I+I+GL G + +A + + G+ +
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 388 ICGLCQRGLVRKALELL-KQMADKDVSPGARVWEALL 423
+ GLC V A E++ +++ V V+ AL+
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALI 227
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 38/246 (15%)
Query: 79 PPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNL 138
P + Y+F++K + E FCD+ S + LI+T+ A + + L
Sbjct: 306 PDKCYNFMVKEM-EPRGFCDVVS-----------------YSTLIETFCRASNTRKAYRL 347
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
F ++ + G + ++ SLI + + E + +LL +M
Sbjct: 348 FEEM-----RQKGMVMNVVT------------YTSLIKAFLREGNSSVAKKLL---DQMT 387
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
+LG + YT ++ L K V A G+ N M I PD + Y +++G+
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVT 447
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A +LF+++ PD T+ I GL + + A K+ M + G D +TL+
Sbjct: 448 EAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Query: 319 QALCKV 324
+A C +
Sbjct: 508 KASCSM 513
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 162/367 (44%), Gaps = 24/367 (6%)
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEK-RENFETPEF 117
K + LLH NC P A++ + L + I L+ EK +N P+
Sbjct: 93 KNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGR---IDLALEVFEKIVKNGRKPDV 149
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+ +I ++ KI KF AI+ MI+ GF D K C I+
Sbjct: 150 VTYTII------------IHGVCKIKKFDT-----AIQFWRDMIHKGFSPDNKACGAIVV 192
Query: 178 SVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+C+ R + + EL+ + MK + Y +I + ++ A I + M+ +G
Sbjct: 193 GLCDGRKVDLAYELI--IDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNG 250
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+PD+V Y + LN + A++L + G+ PDVY+YN + G+CK N +
Sbjct: 251 CEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAY 310
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ DV++YNT+++A CK+ + +L +EM KGI ++ T++I I
Sbjct: 311 LLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAF 370
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KG A LL++ GL + I LC+ G V A + M ++ +SP
Sbjct: 371 LGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDV 430
Query: 417 RVWEALL 423
+ AL+
Sbjct: 431 ISFNALI 437
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L M G D + + +L +C+ LL +M G C +V Y +
Sbjct: 274 AKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLL-MTNKMWPKGLC-DVVSYNTI 331
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I++ K A + +M GI PD+V +T+ + + + + A++L D++ +GL
Sbjct: 332 IKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGL 391
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD Y I+ LCK VE + M E G PDVI++N L+ CK ++
Sbjct: 392 SPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMH 451
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L +EM+ +G + TY ++I GL + I AC + + ++KG ++ I G
Sbjct: 452 LYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 5/299 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A+E+ ++ +G D T ++I+ VC+ + D + F ++M GF
Sbjct: 128 GRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKF--DTAIQFWRDMIHKGFSPDNK 185
Query: 208 DYTNVIRSLVKKEKVFDALG-ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
++ L KV A I++ MKS +K + Y +++G KA+ +
Sbjct: 186 ACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSF 245
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G PD+ TYNV++N C + ++ K++ ME G +PDV +YN LL+ +CK
Sbjct: 246 MRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNC 305
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ L+ W + ++ +Y+ +I GD A L EE KG+ F
Sbjct: 306 PDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTI 365
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
I +G A +LL QM + +SP + ++ L K++ ++ F +V+Q
Sbjct: 366 FIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQ 424
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 101/218 (46%), Gaps = 1/218 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+DY I L+ + A +QM + G Y+ + G+ +++ +EL +
Sbjct: 45 IDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHD 104
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ L +PD++ +N+Y++ L + ++ +++ + + G KPDV+TY ++ +CK+++
Sbjct: 105 METLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKK 164
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FD 385
+ + ++M KG + + ++ GL + A L+ + + G S++ ++
Sbjct: 165 FDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYN 224
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ G + KA + M P + L
Sbjct: 225 ALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFL 262
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 1/216 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y + I VK + A+ + ++M + + Y + +I + A + ++
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G +TY+ +I GLCK N +++ ME L PD+ +N L L ++
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E+ +++ G ++ TY+I+I G+ A + ++KG + +
Sbjct: 132 LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIV 191
Query: 389 CGLCQRGLVRKALEL-LKQMADKDVSPGARVWEALL 423
GLC V A EL + M V V+ AL+
Sbjct: 192 VGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALI 227
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
KA ++FDE+ YN +I L + + + M G TY+ +
Sbjct: 27 KAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFI 86
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCKV+ + EL+ +M+ + ++ ++I + L +G I A + E+ + G
Sbjct: 87 TGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRK 146
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ I G+C+ A++ + M K SP + A+++
Sbjct: 147 PDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVG 193
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 166/358 (46%), Gaps = 32/358 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSV 136
P P Y+F + L ++ + + V+ ++ ++ P+ + F LI A R ++
Sbjct: 52 PTPSMYNFFVHALCKSGKVPEAMEVVKNM--KDGACKPDVVTFNTLIAGLCKAGRLDEAQ 109
Query: 137 NLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ ++ R GFA ++ N +IN G G++ +L
Sbjct: 110 QVLDEM-----ERSGFAANLVTYNTLIN-GLSSAGRSGEAVLV----------------- 146
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS-DGIKPDIVCYTMVLNGVIV 253
M+ + Y +I K ++ A G L +MK G PD Y++++NG+
Sbjct: 147 --MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCK 204
Query: 254 QEDYVKAEELFDELLVL-GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ KA+EL E++ V +N ++G CK +++ ++++ M E G PDV+
Sbjct: 205 SSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVV 264
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY+T++ LC+ ++++ L+++M +G ++ TY++++ GL G ++EAC L++
Sbjct: 265 TYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRM 324
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
L G + + GLC+ + A +LL + DK +E LLLS +L
Sbjct: 325 LEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRL 382
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 98/176 (55%), Gaps = 10/176 (5%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ P YN +++ LCK V ++++ M++ KPDV+T+NTL+ LCK L+
Sbjct: 49 GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
++++ EM+ G NL TY+ +I+GL+S G EA L+ + + TQ+ ++ I G
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAV-LVMQGMTTTPDTQT--YNAIIHG 165
Query: 391 LCQRGLVRKALELLKQMADK-DVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
C+ G + +A L++M + SP + ++L++ + K +S +R D++L
Sbjct: 166 FCKSGEIDRAYGFLEEMKQRAGCSPDTFTY-SILINGLCK-----SSNLRKADELL 215
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++R+ ++ A+ +L +M+ G+ P Y ++ + +A E+ +
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PDV T+N I GLCK ++ +++ ME G +++TYNTL+ L
Sbjct: 81 KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSA--- 137
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDE 386
R E V M+ + QTY+ +I G G+I A G LEE + C+ + +
Sbjct: 138 GRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 387 TICGLCQRGLVRKALELLKQM 407
I GLC+ +RKA ELL++M
Sbjct: 198 LINGLCKSSNLRKADELLQEM 218
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEEL-GSKPDVITYNTLLQALCKVRELNRLREL 333
D YTY V + C ++A + ++ ME+ G P YN + ALCK ++ E+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
VK MK ++ T++ +I GL G + EA +L+E G ++ I GL
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
G +A+ +++ M +P + + A++
Sbjct: 137 AGRSGEAVLVMQGMT---TTPDTQTYNAII 163
>gi|357499031|ref|XP_003619804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494819|gb|AES76022.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 344
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 52/273 (19%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I + K + V DA + ++M + I PD++ Y+ +++G + LF+++
Sbjct: 53 YSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMT 112
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ PDVYT+N+ ++ CK+ V+ +++ M + G KP V+TYNTL+ C V+E+N
Sbjct: 113 AENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMN 172
Query: 329 RLRELVKEMKWKGIV------LNL------------------------------------ 346
+++ M G+V +NL
Sbjct: 173 MAKDIFNTMNQSGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITYN 232
Query: 347 ----------QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
TY+I I GL G + +A + E+ L KG + I G C +GL
Sbjct: 233 SILDGIRPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGL 292
Query: 397 VRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++AL LL +M D P A+++E ++LS K
Sbjct: 293 FKEALALLSKMEDNGCIPDAKIYEIVILSLFEK 325
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 132/275 (48%), Gaps = 19/275 (6%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A ++ + M+ D T S ++S C L ++ +G +M + +
Sbjct: 66 VNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKL--NDTIGLFNKMTAENINPDVYTF 123
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ + K+ +V +A +L+ M GIKP +V Y ++NG + ++ A+++F+ +
Sbjct: 124 NISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQ 183
Query: 270 LGLVPDV-YTYNVYINGLCKQN--NVEAGIKMIACMEELGSKPDVITYNTLL-------- 318
G+V + N+Y C++N +V ++ M + G PD+ITYN++L
Sbjct: 184 SGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITYNSILDGIRPDMY 243
Query: 319 ------QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
+ LC+ +L R++ +++ KG L++ TY++MI G KG EA LL +
Sbjct: 244 TYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKM 303
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+ G + +++ I L ++ A +LL++M
Sbjct: 304 EDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREM 338
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%)
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
DGI+PD+ YT+ + G+ A ++F++LLV G DVYTY V I G C + +
Sbjct: 236 DGIRPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKE 295
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ +++ ME+ G PD Y ++ +L + E + +L++EM +G++
Sbjct: 296 ALALLSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREMIARGLL 344
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 123/275 (44%), Gaps = 24/275 (8%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKT- 171
+P+ I + LI + + D++ LF K+ IN + I D FC +G+
Sbjct: 82 SPDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISV----DAFCKEGRVK 137
Query: 172 -----CSLILSSVCEQRDLSSDELLG---FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
S+++ + ++ + L+ V+EM F ++ + V++ +
Sbjct: 138 EAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGVVKM------ID 191
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL-GLVPDVYTYNVY 282
+A+ + +M PD+V Y+ +++ + D + ++ +L G+ PD+YTY ++
Sbjct: 192 EAINLYEEMHCRKNIPDVVTYSSLVD---IMHDRGQPPDIITYNSILDGIRPDMYTYTIF 248
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I GLC+ ++ K+ + G DV TY ++Q C L+ +M+ G
Sbjct: 249 IKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKMEDNGC 308
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ + + Y I+I L K + A LL E + +GL
Sbjct: 309 IPDAKIYEIVILSLFEKDENDMAEKLLREMIARGL 343
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 68/140 (48%)
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G CK A ++++ ++ +P+VI Y+T++ +CK + +N +L EM K I
Sbjct: 23 DGSCKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRIS 82
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++ TYS +I G G + + GL + + + F+ ++ C+ G V++A +
Sbjct: 83 PDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYV 142
Query: 404 LKQMADKDVSPGARVWEALL 423
L M + P + L+
Sbjct: 143 LSMMMKHGIKPSVVTYNTLM 162
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P+V Y+ I+G+CK V + + M PDVITY+ L+ C V +LN L
Sbjct: 48 PNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLNDTIGL 107
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+M + I ++ T++I +D +G + EA +L + G+ ++ + G C
Sbjct: 108 FNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPSVVTYNTLMNGYC 166
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 127/240 (52%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ L + +K+ G V YT +I+ +K + +A+ + N+M G D+V Y +
Sbjct: 382 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTI 441
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ ++ +A++LF+E+ GL PD YT + I+G CK N++ +++ M+E
Sbjct: 442 LHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRI 501
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
K DV+TYNTLL KV +++ +E+ +M K I+ ++SI+++ L SKG + EA
Sbjct: 502 KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFR 561
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ +E ++K + + + I G C+ G L++M + P + L+ V
Sbjct: 562 VWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFV 621
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ M+ G D T +L C++ D E +M+ +V ++++
Sbjct: 314 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETE--NIFSDMRSRDVVPDLVCFSSM 371
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + + AL N +K G+ PD V YT+++ G + +A L +E+L G
Sbjct: 372 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGC 431
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
DV TYN ++GLCK+ + K+ M E G PD T L+ CK+ L E
Sbjct: 432 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAME 491
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K+MK K I L++ TY+ ++DG GDI A + + ++K + F + LC
Sbjct: 492 LFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALC 551
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+G + +A + +M K + P + +++
Sbjct: 552 SKGHLSEAFRVWDEMISKSIKPTVMICNSMI 582
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/500 (21%), Positives = 206/500 (41%), Gaps = 67/500 (13%)
Query: 6 ALKRANLHLRKH--RKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHI 63
+LK+ N ++R H R PL+ + + D ++ V Q P + +
Sbjct: 51 SLKQGNSNVRNHLIRLNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLS----- 105
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
LS+++H + +A V++ + S + V + N + + +F LI
Sbjct: 106 LSAMIHI--LVRSGRLSDAQSCVLR-MIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLI 162
Query: 124 KTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFC 166
+T+ A + +++ F + RI V A I + G
Sbjct: 163 RTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVG 222
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
V+ T +++++++C +D +++ F+ E+++ G +V Y +I + + + +A
Sbjct: 223 VNVYTLNIMVNALC--KDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+++ M S G P + Y V+NG+ Y +A+E+F E+L GL PD TY +
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340
Query: 287 CKQN-----------------------------------NVEAGIKMIACMEELGSKPDV 311
CK+ N++ + ++E G PD
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+ Y L+Q C+ ++ L EM +G +++ TY+ ++ GL + + EA L E
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSK 429
+GL S I G C+ G ++ A+EL K+M +K + + LL V
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520
Query: 430 LDFVNTSFIRLVD-QILNTP 448
+D + +V +IL TP
Sbjct: 521 IDTAKEIWADMVSKEILPTP 540
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 146/295 (49%), Gaps = 6/295 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + N M+ G +D T + IL +C+++ L + L EM + G T +
Sbjct: 419 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL--FNEMTERGLFPDSYTLTIL 476
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K + +A+ + +MK IK D+V Y +L+G D A+E++ +++ +
Sbjct: 477 IDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 536
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P ++++ +N LC + ++ ++ M KP V+ N++++ C+ +
Sbjct: 537 LPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEI 596
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK--GLCTQSSMFDETICG 390
+++M +G V + +Y+ +I G + ++ +A GL+++ K GL ++ + G
Sbjct: 597 FLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHG 656
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
C+ +++A +L++M ++ V+P + +L+ VS+ + T R D++L
Sbjct: 657 FCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNL--TEAFRFHDEML 709
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ ++ ++ +L K + +A + ++M S IKP ++ ++ G + E ++
Sbjct: 541 ISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEK 600
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL--GSKPDVITYNTLLQALCKV 324
++ G VPD +YN I G K+ N+ ++ MEE G PDV TYN++L C+
Sbjct: 601 MISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRE 660
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++ ++++M +G+ + TY+ +I+G S+ ++ EA +E L +G
Sbjct: 661 NQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGF 713
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 4/267 (1%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+G A ++ N M G D T ++++ C+ +L + + ++MK+ +V Y
Sbjct: 451 LGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQN--AMELFKKMKEKRIKLDVVTY 508
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++ K + A I M S I P + +++++N + + +A ++DE++
Sbjct: 509 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMIS 568
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ P V N I G C+ N G + M G PD I+YNTL+ K +++
Sbjct: 569 KSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSK 628
Query: 330 LRELVKEMKWK--GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
LVK+M+ K G+V ++ TY+ ++ G + + EA +L + + +G+ S +
Sbjct: 629 AFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSL 688
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I G + + +A +M + SP
Sbjct: 689 INGFVSQDNLTEAFRFHDEMLQRGFSP 715
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 2/258 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ N + G D ++++ C + +S E + EM + G +V Y +
Sbjct: 384 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS--EAMNLRNEMLQQGCAMDVVTYNTI 441
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K++ + +A + N+M G+ PD T++++G + A ELF ++ +
Sbjct: 442 LHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRI 501
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
DV TYN ++G K +++ ++ A M P I+++ L+ ALC L+
Sbjct: 502 KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFR 561
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM K I + + MI G G+ + LE+ +++G ++ I G
Sbjct: 562 VWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFV 621
Query: 393 QRGLVRKALELLKQMADK 410
+ + KA L+K+M +K
Sbjct: 622 KEENMSKAFGLVKKMEEK 639
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
C+ ++ C + S E+ F+++M GF + Y +I VK+E + A G++ +
Sbjct: 578 CNSMIKGYCRSGNASDGEI--FLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKK 635
Query: 232 M--KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M K G+ PD+ Y +L+G + +AE + +++ G+ PD TY ING Q
Sbjct: 636 MEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQ 695
Query: 290 NNVEAGIKMIACMEELGSKPD 310
+N+ + M + G PD
Sbjct: 696 DNLTEAFRFHDEMLQRGFSPD 716
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM--KKLGFCFGMVDYTNVI 213
L MI++GF D + + ++ ++ ++S + G V++M K+ G + Y +++
Sbjct: 597 FLEKMISEGFVPDCISYNTLIYGFVKEENMS--KAFGLVKKMEEKQGGLVPDVFTYNSIL 654
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
++ ++ +A +L +M G+ PD YT ++NG + Q++ +A DE+L G
Sbjct: 655 HGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFS 714
Query: 274 PD 275
PD
Sbjct: 715 PD 716
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 113/227 (49%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M + G G + +++ S + K+ A+ +L M+ DG PDI M +N ++V
Sbjct: 152 MIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGR 211
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA E + + +G+ PDV TYN I GLC + ++MI+ M + G PD I+Y T
Sbjct: 212 IDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFT 271
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ LCK + + ++ L++ M GI + TY+++I GLA G EA L E+ K
Sbjct: 272 VMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKR 331
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ T+ C G + +A E++ +M K P + A++
Sbjct: 332 FRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVV 378
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A+ +L M DG D C++ ++ + + D+ L F + M+++G
Sbjct: 173 RAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRI--DKALEFAERMRRVGVDPD 230
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I+ L ++ DAL +++ M +G PD + Y V++ + ++ + L +
Sbjct: 231 VVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLE 290
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G+ PD TYN+ I+GL K + + + + E + D + Y+ + + C
Sbjct: 291 RMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNG 350
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +E++ EM KG ++ TYS ++DG G++ +A +++ G +
Sbjct: 351 RMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHT 410
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+ G +A ELL + ++ +P A + ++
Sbjct: 411 ALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVM 448
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 129/262 (49%), Gaps = 2/262 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A+E+++ M+ +G D + ++S +C+++ ++ ++ ++ M G V
Sbjct: 246 RIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVA--DVQNLLERMSDAGIFPDQVT 303
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K +AL L + + + D V Y+ ++ + +A+E+ E++
Sbjct: 304 YNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMI 363
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PDV TY+ ++G C+ ++ KM+ M + G KP+ +T+ LL LCKV + +
Sbjct: 364 SKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSS 423
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL+ + + + + TYS+++ G +G + E+C ++ + L KG + + I
Sbjct: 424 EAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLI 483
Query: 389 CGLCQRGLVRKALELLKQMADK 410
LC A + ++Q K
Sbjct: 484 HALCNERKPADAKDFMEQCQSK 505
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 177/429 (41%), Gaps = 70/429 (16%)
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
++SS+L + C P +Y V+ L + + D+ ++L+ + F P+ + ++
Sbjct: 253 MISSMLQN----GCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIF--PDQVTYNM 306
Query: 123 IKTYADAHRFQDSVNLFYKIP---KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
+ H D F + +FR++ VG++ + FC++G+
Sbjct: 307 LIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATV------HSFCLNGRMAE------ 354
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
+ E++G EM G +V Y+ V+ + ++ A ++ M +G KP
Sbjct: 355 -------AKEIIG---EMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKP 404
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
+ V +T +LNG+ +A EL ++ P TY+V ++G ++ ++ ++
Sbjct: 405 NTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVV 464
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M + G P + N L+ ALC R+ ++ +++ + KG +N+ ++ +I G + +
Sbjct: 465 MQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQ 524
Query: 360 GDI-----------------------------------IEACGLLEEALNKGLCTQSSMF 384
GD+ EA L+E+ LN+GL +
Sbjct: 525 GDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTY 584
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
I C++G V L LL +M K+ A L + KL N L+ ++
Sbjct: 585 RTVIHRYCEKGAVEDLLNLLDKMLAKEGFSSAYNQVIEKLCAFGKLSEANN----LLSKV 640
Query: 445 LNTPCKMEG 453
L T K +
Sbjct: 641 LRTASKRDA 649
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 98/201 (48%), Gaps = 4/201 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ GF +L++ ++C +R + + F+++ + G +V++T VI ++
Sbjct: 467 MLQKGFFPTTVEINLLIHALCNERKPADAK--DFMEQCQSKGCFINVVNFTTVIHGFSRQ 524
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ AL +L+ M PD+V YT+V++ + + +A L +++L GL P TY
Sbjct: 525 GDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTY 584
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+ C++ VE + ++ M L + YN +++ LC +L+ L+ ++
Sbjct: 585 RTVIHRYCEKGAVEDLLNLLDKM--LAKEGFSSAYNQVIEKLCAFGKLSEANNLLSKVLR 642
Query: 340 KGIVLNLQTYSIMIDGLASKG 360
+ QT I++D ++G
Sbjct: 643 TASKRDAQTCHILMDSFLNRG 663
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 20/190 (10%)
Query: 254 QEDYVKAEELFDELLVL--------------------GLVPDVYTYNVYINGLCKQNNVE 293
Q Y A E+FDE+LVL G+ + + + +
Sbjct: 119 QWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLR 178
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ ++++ M++ G PD+ N + L +++ E + M+ G+ ++ TY+ +I
Sbjct: 179 SAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLI 238
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GL I++A ++ L G + + LC+ V LL++M+D +
Sbjct: 239 KGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIF 298
Query: 414 PGARVWEALL 423
P + L+
Sbjct: 299 PDQVTYNMLI 308
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 136/269 (50%), Gaps = 2/269 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++LN M+ +G + ++ S+ + + D+ + +M++ G V Y +I
Sbjct: 16 DLLNLMVANGISPNHHIFNIFFSAYAKCGMI--DKAMDIFNKMRQHGLSPDAVSYGALID 73
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L K +V DA NQM ++G+ P+IV ++ ++ G+ + + K EELF E+L +G+ P
Sbjct: 74 ALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHP 133
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
++ +N + LCK+ V G +++ +E +G +PDVI+YNTL+ C ++ +L+
Sbjct: 134 NIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLL 193
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+ M G+ N +Y+ ++ G G I A L + L+ G+ ++ + GL Q
Sbjct: 194 EGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQT 253
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
+A EL M + G + +L
Sbjct: 254 KRFSEAKELYLNMINSGTKWGIYTYNTIL 282
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 129/269 (47%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A N MIN+G + S ++ +C E L F EM +G
Sbjct: 77 KLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFF--EMLNVGIHPN 134
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ +L K+ +V + +++ ++ G++PD++ Y +++G + +A +L +
Sbjct: 135 IVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLE 194
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ +GL P+ ++YN ++G CK +++ + M G P V+TYNT+L L + +
Sbjct: 195 GMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTK 254
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +EL M G + TY+ +++GL + EA + + +KGL F
Sbjct: 255 RFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFT 314
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I L + G A++L + + P
Sbjct: 315 IMIGALLKGGRKEDAMDLFAAIPANGLVP 343
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++ M +G Y ++ K ++ A + +M S+GI P +V Y +
Sbjct: 187 DEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTI 246
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ + + +A+EL+ ++ G +YTYN +NGLCK N V+ KM + G
Sbjct: 247 LHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGL 306
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ ++IT+ ++ AL K +L + G+V ++ TY ++ + L +G + E
Sbjct: 307 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDS 366
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L G S M + + L RG + +A L ++ +++ S A L+
Sbjct: 367 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 422
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 99/213 (46%), Gaps = 2/213 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+ A + M+++G T + IL + + + S + L M G +G
Sbjct: 217 KAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKEL--YLNMINSGTKWG 274
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++ L K V +A + + S G++ +I+ +T+++ ++ A +LF
Sbjct: 275 IYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 334
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ GLVPDV TY V L ++ ++E + + ME+ G+ P+ N L++ L
Sbjct: 335 AIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 394
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+++R + ++ + + T S++I +S
Sbjct: 395 DISRAGAYLSKLDERNFSVEASTTSMLISIFSS 427
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 103/254 (40%), Gaps = 23/254 (9%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNC 159
F + L+ Y A R + +LF K+ F+ R A E+
Sbjct: 206 FSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 265
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MIN G T + IL+ +C+ + DE Q + G ++ +T +I +L+K
Sbjct: 266 MINSGTKWGIYTYNTILNGLCKSNCV--DEAFKMFQSLCSKGLQLNIITFTIMIGALLKG 323
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ DA+ + + ++G+ PD+V Y +V +I + + + LF + G P+
Sbjct: 324 GRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQML 383
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + L + ++ ++ ++E + T + L+ + + L K+ +
Sbjct: 384 NALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYR- 442
Query: 340 KGIVLNLQTYSIMI 353
+LN S +I
Sbjct: 443 ---ILNEANSSALI 453
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+L L+ + +L+ M GI N ++I A G I +A + + G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVN 434
L + + I LC+ G V A QM ++ V+P V+ +L+ L S+ K + V
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 435 TSFIRLVD 442
F +++
Sbjct: 121 ELFFEMLN 128
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 2/290 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + + A ++ M+++GF + T ++++ ++ D+ + MK
Sbjct: 296 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDI--ENAFSIFHRMKDANILPT 353
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+I+ L K + F+ + N+ S G P + Y +++G I + + A ++
Sbjct: 354 DTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYR 413
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +G+ P TY I+G CK NN++ +K++ M+ G K D+ Y TL+ CK R
Sbjct: 414 EMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRR 473
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ EL+ E++ G+ N Y+ MI G + ++ EA L ++ +N+G+ +
Sbjct: 474 DMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYT 533
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
I GL + G + A ++ +M K + P R L+ +K F N
Sbjct: 534 SLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 583
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 116/229 (50%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM ++G V YT++I K + AL +LN MK G+K DI Y +++G +
Sbjct: 413 REMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKR 472
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
D A EL +EL GL P+ + YN I G NNVE I + M G D+ TY
Sbjct: 473 RDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTY 532
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+L+ L K L ++ EM KGI+ + + ++++I+GL +KG A +LE+
Sbjct: 533 TSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNG 592
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
K + +++ I G + G +++A L +M D+ + P ++ L+
Sbjct: 593 KNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 641
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+S L ++EM+ G+ +T+VI + VK+ V +AL + + M + G ++ T
Sbjct: 90 NSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVAT 149
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G +Q + A L +E+ GLVP+ TY+V I+G CK N+E + + M+
Sbjct: 150 SLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTK 209
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G + V + N++L+ K + + + G+ N+ T++ ++ L +G + EA
Sbjct: 210 GIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEA 268
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C L +E + KG+ ++ I G C++ + A ++ K+M D +P A + L+
Sbjct: 269 CNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDG 328
Query: 426 SVSKLDFVN--TSFIRLVD 442
K D N + F R+ D
Sbjct: 329 YFKKGDIENAFSIFHRMKD 347
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + +LS +C++ + +E E+ G +V Y N+I +K+ + A +
Sbjct: 251 TFNTLLSWLCKEGKM--NEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 308
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M +G P+ V +T++++G + D A +F + ++P T + I GLCK
Sbjct: 309 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 368
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
G + G P + YNT++ K +N + +EM GI + TY+
Sbjct: 369 RSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYT 428
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+IDG +I A LL + KGL + I G C+R ++ A ELL ++
Sbjct: 429 SLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 488
Query: 411 DVSPGARVWEALL 423
+SP ++ +++
Sbjct: 489 GLSPNRFIYNSMI 501
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++N + G + T S+++ C+ ++ ++ F EMK G + ++
Sbjct: 164 ALVLVNEISESGLVPNKVTYSVLIDGCCKNGNI--EKAFEFYSEMKTKGIRSSVYSLNSI 221
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +K + +A + N G+ ++ + +L+ + + +A L+DE++ G+
Sbjct: 222 LEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 280
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V +YN I G C+++N+ A K+ M + G P+ +T+ L+ K ++
Sbjct: 281 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFS 340
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ MK I+ T I+I GL G E L + +++G ++ I G
Sbjct: 341 IFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFI 400
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + A + ++M + ++P + +L+
Sbjct: 401 KEGNINLASNVYREMCEVGITPSTVTYTSLI 431
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 106/220 (48%), Gaps = 2/220 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++ C+ ++ D L + +MK+ G + Y +I K+ + A +LN
Sbjct: 426 TYTSLIDGFCKGNNI--DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 483
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+++ G+ P+ Y ++ G + +A +L+ +++ G+ D+ TY I+GL K
Sbjct: 484 ELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSG 543
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + M G PD + L+ LC + R+++++M K ++ ++ Y+
Sbjct: 544 RLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYN 603
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+I G +G++ EA L +E L++GL + +D + G
Sbjct: 604 TLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-------------------- 187
N + A+++LN M G +D K ++ C++RD+ S
Sbjct: 438 NNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIY 497
Query: 188 -------------DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+E + ++M G + YT++I L+K ++ A I +M S
Sbjct: 498 NSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 557
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
GI PD +T+++NG+ + + A ++ +++ ++P V YN I G K+ N++
Sbjct: 558 KGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQE 617
Query: 295 GIKMIACMEELGSKPDVITYNTLLQA 320
++ M + G PD ITY+ L+
Sbjct: 618 AFRLHDEMLDRGLVPDNITYDILVNG 643
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 89/187 (47%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P I C ++L ++ + +A EL +++L++G+ D +T +V + K+ N+
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ + G + D Y+ + LC L++EM+ G + T++ +I
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+G++ EA L ++ +N G ++ + G C +G +R AL L+ ++++ + P
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180
Query: 417 RVWEALL 423
+ L+
Sbjct: 181 VTYSVLI 187
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 94/212 (44%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ ++V+K +A + N+M G+ D ++L + + + ++AE+ F + G
Sbjct: 11 LLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARG 70
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ D Y+++++ LC + N + ++ M G P T+ +++ A K +
Sbjct: 71 VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 130
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L +M G +NL + ++ G +G++ A L+ E GL + I G
Sbjct: 131 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 190
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G + KA E +M K + ++L
Sbjct: 191 CKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL 222
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 152/334 (45%), Gaps = 21/334 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F + +IK+ R Q+++++ ++ K DG D + ++++
Sbjct: 237 FSYNTVIKSLCGGSRSQEALDMLLRMTK-----------------GDGCSPDVVSYTMVI 279
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ + ++S + EM + G +V Y +++ +L K + A +L QM +
Sbjct: 280 HGLFMEGEIS--KACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I+PD V YT +++G + +A ++F E+ GL+PD+ T+N ++ LCK +
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ + G KPD+I+Y+ LL + L M GIV + ++I+I+
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
A +G + EA + E +G+ + I LC+ G + A+E L QM + P
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517
Query: 417 RVWEALLLSSVSKLDFVNTSFI--RLVDQILNTP 448
V+ +L+ + D + + ++DQ + P
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRP 551
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 138/323 (42%), Gaps = 56/323 (17%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
L+ YA RF D NLF+ M ++G D C IL +
Sbjct: 418 LLHGYATEGRFVDMNNLFHS------------------MTDNGIVADSH-CFNILINAHA 458
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+R + + LL F EM+ G +V Y VI +L + ++ DA+ L+QM S G+KP+
Sbjct: 459 KRGMMDEALLIFT-EMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELL------------------------------VLG 271
V Y ++ G D +KA+EL E++ V
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFN 577
Query: 272 LV------PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
LV PD++T+N I+G C ++ ++ M G++PDV+TY+TL+ K
Sbjct: 578 LVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSG 637
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L +EM K + TYS+++DGL G A + E + G S +
Sbjct: 638 RIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYT 697
Query: 386 ETICGLCQRGLVRKALELLKQMA 408
+ GLC+ +A+ L ++
Sbjct: 698 IILQGLCRNNCTDEAITLFHKLG 720
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 166/375 (44%), Gaps = 52/375 (13%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI 123
LS LLH S C P +Y+ VIK+L S+ + +L + K + +P+ + ++
Sbjct: 220 LSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGC-SPDVVSYTMV 278
Query: 124 KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
H F + A + N M+ G + T + I+ ++C+ R
Sbjct: 279 -----IHGL------------FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKAR 321
Query: 184 DLSSDELL---------------------GF------------VQEMKKLGFCFGMVDYT 210
+ EL+ G+ +EM + G +V +
Sbjct: 322 AMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFN 381
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+++ SL K ++ +A I + + + G KPDI+ Y+++L+G + +V LF +
Sbjct: 382 SLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDN 441
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+V D + +N+ IN K+ ++ + + M G P+V+TY T++ ALC++ L
Sbjct: 442 GIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADA 501
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFDETIC 389
E + +M G+ N Y +I G + GD+I+A L+ E +++G+ + + F I
Sbjct: 502 MEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIH 561
Query: 390 GLCQRGLVRKALELL 404
LC G V A ++
Sbjct: 562 SLCNEGRVMNAQDVF 576
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 16/238 (6%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+C+ GK D+ G + M G +V Y+ +I K ++
Sbjct: 596 DGYCLVGKM----------------DKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRI 639
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
D L + +M +KP V Y++VL+G+ A+++F E++ G + TY +
Sbjct: 640 DDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTII 699
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
+ GLC+ N + I + + + K ++ NT++ AL KV+ +L + G+
Sbjct: 700 LQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGL 759
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
V N TY +MI L +G + EA + G S + ++ I L Q+G + KA
Sbjct: 760 VPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIV-------QEDYVKAEELFDELLVLGLVPDVY 277
A+ + N++ + P +V T+ G+++ + D A F LL GL D
Sbjct: 144 AVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPA--FFARLLRAGLRTDGI 201
Query: 278 TYNVYINGLCKQNNVEAGIKMIAC-MEELGSKPDVITYNTLLQALC-KVRELNRLRELVK 335
N ++ LC + + M+ M ELG PD +YNT++++LC R L L++
Sbjct: 202 VTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLR 261
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
K G ++ +Y+++I GL +G+I +AC L E + KG+ ++ + LC+
Sbjct: 262 MTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKAR 321
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+ KA +L+QM D + P + A++
Sbjct: 322 AMDKAELVLRQMFDNSIQPDEVTYTAMI 349
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G + YT +++ L + +A+ + +++ + +K +I +++ +
Sbjct: 682 HEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKV 741
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +LF + GLVP+ TY V I L K+ +VE M + ME+ G P
Sbjct: 742 KRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLL 801
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
N +++ L + E+ + + ++ I L T S++I ASKG
Sbjct: 802 NDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKG 847
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 51/328 (15%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ L +I GF V+ T + +L +C + +SD + ++ M +LG
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKR-TSDAMDIVLRRMTELGCIPN 157
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQEDYVKA-- 260
+ Y N++ L + + +AL +L+ M D G PD+V YT V+NG + D KA
Sbjct: 158 VFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 261 ---------------------------------------------EELFDELLVLGLVPD 275
E+LFD ++ +G+ PD
Sbjct: 218 TYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPD 277
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ TY+ I+G C ++ +K+++ M +G KP+ +TY+TL+ CK+ + L K
Sbjct: 278 IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 337
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM+ G+ ++ TY+I++ GL A L G + S ++ + GLC+
Sbjct: 338 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 397
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
L AL++ + + D+ AR + ++
Sbjct: 398 LTDDALQMFQNLCLMDLKLEARTFNIMI 425
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 21/251 (8%)
Query: 149 RVGFAIEILN-CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+G +I+ + DG+C+ GK DE + + M +G V
Sbjct: 271 RIGVKPDIITYSTLIDGYCLAGKM----------------DEAMKLLSGMVSVGLKPNTV 314
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +I K ++ DAL + +M+S G+ PDI+ Y ++L G+ A+EL+ +
Sbjct: 315 TYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 374
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA--CMEELGSKPDVITYNTLLQALCKVR 325
G ++ TYN+ ++GLCK + ++M C+ +L K + T+N ++ AL KV
Sbjct: 375 TESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL--KLEARTFNIMIDALLKVG 432
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++L G+V N TY +M + + +G + E L + G S M +
Sbjct: 433 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 492
Query: 386 ETICGLCQRGL 396
+ L QR L
Sbjct: 493 FIVRELLQRAL 503
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD+ TY + I C+ ++ G + + + G + + IT+ LL+ LC + +
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 332 ELV-KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE-EALNKGLCTQSSMFDET-- 387
++V + M G + N+ +Y+ +++GL + EA LL A ++G + + T
Sbjct: 143 DIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I G + G KA +M D+ + P + +++ +
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAA 240
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 3/280 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F RV A+ I N M +GF + + ++ +C + E + +M++ G
Sbjct: 330 FMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMG--EAVSVSSKMERNGCSP 387
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y +I K + A I N+M ++G P++V YT ++N + + +A L
Sbjct: 388 NVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLI 447
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ P+ T+N +I GLC VE I + ME+ G P++ TYN +L L K
Sbjct: 448 EKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKE 507
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ ELV EM+ KG+ LNL TY+ + G + G EA LL + L G+ + +
Sbjct: 508 NRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITY 567
Query: 385 DETICGLCQRGLVRKALELLKQM-ADKDVSPGARVWEALL 423
+ C +G V+ A++LL ++ A P + +LL
Sbjct: 568 NTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLL 607
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 191/437 (43%), Gaps = 42/437 (9%)
Query: 11 NLHLRKHRKWPLSPYKAKWHQTLDQ-------QQAKQNVKQSLTTPPTKQQQQIPKQPHI 63
+L L+ H+ PL P+ + L+ Q+ K +K+S + + I +
Sbjct: 8 SLLLKVHK--PLIPFVLNTNPILNPGNKPPEYQEIKTPIKESDVVMRLRTETDIVLASNY 65
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSV--LDHIEKRENFETPEFIFID 121
S+ +S + + + Y +I+ L CD+ V L K E E +FI+
Sbjct: 66 FRSIANSKAFQHTQL---TYQIMIEKLGRE---CDVDGVQYLLQQMKLEGISCSEDLFIN 119
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
+I TY + ++ +FY+I +F ++I N +++ + + E
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQP---TVKIYNHLLD--------------AMLSE 162
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
R + + MK+ G + Y ++++L K +V A +L +M + G +PD+
Sbjct: 163 NRFQMIEPIY---SNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDV 219
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V YT V++ + K EE + L + P+V YN ING C++ V+ ++
Sbjct: 220 VSYTTVISSM---SKLGKVEEARE--LSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQ 274
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M E G P+VITY+T++ +L + + + +M +G N+ T++ ++ G +G
Sbjct: 275 MVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGR 334
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
++EA + +G ++ I GLC G + +A+ + +M SP + A
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGA 394
Query: 422 LLLSSVSKLDFVNTSFI 438
L+ D V S I
Sbjct: 395 LIDGFAKAGDLVGASEI 411
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 151/348 (43%), Gaps = 28/348 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDS 135
EP Y+ ++K L +N++ +L +E P+ + + +I + + + +++
Sbjct: 181 EPNVYTYNILLKALCKNNRVDGACKLL--VEMSNKGCEPDVVSYTTVISSMSKLGKVEEA 238
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
L + F+ N + + N +IN GFC R+ E+ +
Sbjct: 239 RELSIR---FQPN-----VSVYNALIN-GFC----------------REYKVKEVFLLLG 273
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M + G ++ Y+ VI SL V AL + +M G P++ +T ++ G ++
Sbjct: 274 QMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRG 333
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
++A +++ + G P+V YN I+GLC + + + + ME G P+V TY
Sbjct: 334 RVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYG 393
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ K +L E+ +M G + N+ Y+ M++ L +A L+E+
Sbjct: 394 ALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTD 453
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ F+ I GLC G V A+ L QM SP + + +L
Sbjct: 454 NCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVL 501
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 150/333 (45%), Gaps = 30/333 (9%)
Query: 67 LLHSFSIYN------CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF-IF 119
+L + +I+N EP AY+ +I L + + + SV +E+ N +P +
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMER--NGCSPNVSTY 392
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
LI +A A VG A EI N M+ +G + + +++ +
Sbjct: 393 GALIDGFAKAGDL-----------------VG-ASEIWNKMMTNGCIPNVVVYTSMVNVL 434
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C S + +++M V + I+ L +V A+ + QM+ G P
Sbjct: 435 CRSSMFS--QAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSP 492
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
+I Y VL+G++ + +A EL E+ G+ ++ TYN G C E +K++
Sbjct: 493 NIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLL 552
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG-IVLNLQTYSIMIDGLAS 358
M G KPD ITYNTL A C ++ +L+ ++ G V + Y+ ++ G+ +
Sbjct: 553 GKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICN 612
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ + EA L++ LN+G+C ++ ++ + GL
Sbjct: 613 QIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M++ G + Y V+ L+K+ ++ +AL ++ +M+ G++ ++V Y + G
Sbjct: 484 QMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVG 543
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITY 314
+ +A +L ++LV G+ PD TYN C Q V+ I+++ + G P+V Y
Sbjct: 544 KFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAY 603
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+LL +C + + +M +GI LN T++ ++ GL + + +L++ L
Sbjct: 604 TSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILT 663
Query: 375 KG 376
G
Sbjct: 664 SG 665
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 114/218 (52%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++I K KV +A +L +K G++P V YT ++N + + K EL
Sbjct: 466 IVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLL 525
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ + + P V TY V I GLCKQ +E ++++ M G PD ITYNT++Q CK +
Sbjct: 526 EMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAK 585
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + EL+ +M + TY+++IDGL GD+ +A +L ++ + +
Sbjct: 586 DMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYT 645
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I C +G ++A+++ QM +K + + A++
Sbjct: 646 TMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVI 683
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 125/239 (52%), Gaps = 1/239 (0%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCY 244
S +E L +M+K G MV Y V + + A I+ +M +D G+KPD+V Y
Sbjct: 235 SMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTY 294
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
T+++ G + +A L +LL G +V Y+V ++ LCK+ V+ ++++ ME
Sbjct: 295 TVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEA 354
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
+PD++TY+ L+ LCK ++ + +L KEM + I N +S ++ GL KG + +
Sbjct: 355 NNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSD 414
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A + + L ++++ I G + G V +A+ L K++ DK ++P + +L+
Sbjct: 415 ARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLI 473
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 158/351 (45%), Gaps = 28/351 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P A+ ++K L E D D + N ++ +I Y +++V
Sbjct: 394 PNSFAHSGILKGLCEKGMLSDARMYFDSL-IMSNLRPDVTLYNIMIDGYVKLGDVEEAVR 452
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCSLIL 176
L+ + R + +I N +I GFC + K T + ++
Sbjct: 453 LY---KRLRDKAITPSIVTFNSLIY-GFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLM 508
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
++ CE+ ++ ++L + EM +V YT VI+ L K+ K+ +++ +L M++ G
Sbjct: 509 NAYCEEGNI--NKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ PD + Y ++ +D KA EL D++L+ L P TYNV I+GLC+ +VE
Sbjct: 567 LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDAD 626
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+++ +++ + Y T+++A C + R ++ +M KG ++++ YS +I+ L
Sbjct: 627 RVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRL 686
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+ I EA L+ G+ +F+ + + G V ELL M
Sbjct: 687 CKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 110/213 (51%), Gaps = 1/213 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ L + + DA+ L Q P +V + +++ A+ F +L G
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
++PD Y+YN+ I+GL ++E +++ ME+ G +PD++TY + + + ++ R
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275
Query: 332 ELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
E++++M +G+ +L TY+++I G G+I EA L + L+ G ++ +
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+RG V +AL+LL +M ++ P + L+
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILI 368
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 3/270 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++ N + + G +T S+I+ +C Q L F+++ F +V + ++
Sbjct: 136 DVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVL--FLRQNDGKEFAPSVVSFNTIMS 193
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
K A M GI PD Y ++++G+IV +A EL +++ GL P
Sbjct: 194 RYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQP 253
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACM-EELGSKPDVITYNTLLQALCKVRELNRLREL 333
D+ TY + G + ++I M + G KPD++TY L+ C++ + L
Sbjct: 254 DMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRL 313
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+++ G LN+ YS+++ L +G + EA LL E L + I GLC+
Sbjct: 314 RRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCK 373
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
+G V++A++L K+M + P + +L
Sbjct: 374 QGKVQQAIQLYKEMCFNRIFPNSFAHSGIL 403
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
V V DAL +L +MK ++P I Y +L + D + ++++++ G
Sbjct: 94 VASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYN-LRHTDIM--WDVYNDIKDSGTPQSA 150
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
T ++ ++GLC Q+ + + + P V+++NT++ CK+ + +
Sbjct: 151 RTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCM 210
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M GI+ + +Y+I+I GL G + EA L + +GL + G GL
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGL 270
Query: 397 VRKALELLKQM-ADKDVSPGARVWEALL 423
+ A E++++M D+ + P + L+
Sbjct: 271 MSGAREIIQKMLTDEGLKPDLVTYTVLI 298
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 144/294 (48%), Gaps = 22/294 (7%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
F L+ + ++H++ + N F F RV +E N +++
Sbjct: 116 FNTLLNAFVESHQWARAENFF---KYFEAARVSPNVETYN---------------VLMKV 157
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C++ + G + M G + Y +I + K + AL + ++M+ G++
Sbjct: 158 MCKKGEFEKGR--GLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVE 215
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV-PDVYTYNVYINGLCKQNNVEAGIK 297
PD+VCY M+++G + D+VKA E+++ LL LV P V +YNV I+GLCK G++
Sbjct: 216 PDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLE 275
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M++ K D+ TY+ L+ L + +L R++ +EM +G+ ++ T + M++GL
Sbjct: 276 IWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLC 335
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
G+ +E C L E + K ++ + GL + G V A+ L + + D
Sbjct: 336 KAGN-VEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEAD 388
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 3/264 (1%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G VD S +++++C++ L DE G V+ M K G F +I VK K+
Sbjct: 421 GMDVDEFAYSSLINALCKEGRL--DEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLD 478
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A+ + +M G +V Y +++NG++ E + +A + +E+L G PD+ TY+ I
Sbjct: 479 SAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLI 538
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
GL + N ++A +++ + G KPD+I YN ++ LC ++ +L ++ K V
Sbjct: 539 GGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV 598
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
NL T++ +++G G+ A + L L ++ T+ GLC G V A+
Sbjct: 599 -NLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGF 657
Query: 404 LKQMADKDVSPGARVWEALLLSSV 427
L + P A W L+ + +
Sbjct: 658 LDDALVRGFLPTAITWNILVRAVI 681
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 2/199 (1%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++++ K +AL + M G P I + +LN + + +AE F
Sbjct: 82 TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ P+V TYNV + +CK+ E G ++ M G PD ITY TL+ + K +L
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETI 388
E+ EM+ +G+ ++ Y+++IDG +GD ++A + E L + L S + ++ I
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMI 261
Query: 389 CGLCQRGLVRKALELLKQM 407
GLC+ G + LE+ ++M
Sbjct: 262 SGLCKCGRFSEGLEIWERM 280
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 101/494 (20%), Positives = 190/494 (38%), Gaps = 100/494 (20%)
Query: 46 LTTPPTKQQQQIPKQP-HILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLD 104
LT + ++P + H+ ++ H ++ C P +++ ++ E+ Q+ +
Sbjct: 81 LTLLKAYAKTRMPNEALHVFQTMPH---VFGCSPTIRSFNTLLNAFVESHQWARAENFFK 137
Query: 105 HIEKRE---NFETPEFIFIDLIKTYADAHRFQDSVNLF-----YKIPKFRI--------- 147
+ E N ET + L+K F+ L + RI
Sbjct: 138 YFEAARVSPNVET----YNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGV 193
Query: 148 ---NRVGFAIEILN------------C--MINDGFCVDGK-------------------- 170
+GFA+E+ + C MI DGF G
Sbjct: 194 AKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPS 253
Query: 171 --TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
+ ++++S +C+ S E L + MKK + Y+ +I L + + A +
Sbjct: 254 VVSYNVMISGLCKCGRFS--EGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKV 311
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL--------------------- 267
+M G++PD+V +LNG+ + + EL++E+
Sbjct: 312 YEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFEN 371
Query: 268 --------LVLGLV-PDVYTYNVYINGLCKQNNVEAGIKMIACME--ELGSKPDVITYNT 316
L GL+ D TY V ++GLC V ++++ E E G D Y++
Sbjct: 372 GKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSS 431
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ ALCK L+ +V+ M +G N +++IDG + A + E KG
Sbjct: 432 LINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKG 491
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
++ I GL + R+A + + +M +K P + + L+ + + + ++ +
Sbjct: 492 CSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITY-STLIGGLYESNMMDAA 550
Query: 437 FIRLVDQILNTPCK 450
+RL Q L+T K
Sbjct: 551 -LRLWHQFLDTGHK 563
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 144/365 (39%), Gaps = 53/365 (14%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P +Y+ +I L + +F + + + ++K E DL A H ++ +
Sbjct: 252 PSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERK-------CDLFTYSALIHGLSEAGD 304
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
L G A ++ M+ G D TC+ +L+ +C+ ++ +E +EM
Sbjct: 305 L------------GGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNV--EECFELWEEM 350
Query: 198 KKLG--------------FCFGMVD----------------YTNVIRSLVKKEKVFDALG 227
K F G VD Y V+ L V AL
Sbjct: 351 GKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQ 410
Query: 228 ILNQM--KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+L + + G+ D Y+ ++N + + +A+ + + + G + + NV I+G
Sbjct: 411 VLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDG 470
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
K + +++ +K+ M G V++YN L+ L + + V EM KG +
Sbjct: 471 FVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPD 530
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ TYS +I GL + A L + L+ G M++ I LC G V AL+L
Sbjct: 531 IITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYS 590
Query: 406 QMADK 410
+ K
Sbjct: 591 TLRQK 595
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 110/299 (36%), Gaps = 58/299 (19%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKREN-FETPEFIFIDLIKTYADAHRFQDS 135
E Y V+ L N VL+ E RE + EF + LI R ++
Sbjct: 386 EADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEA 445
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFC--------------VDGKTCSLILSSV-- 179
+ + K F + N +I DGF + GK CSL + S
Sbjct: 446 DGVVELMNK---RGCKFNSHVCNVLI-DGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNI 501
Query: 180 ---CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
R E V EM + G+ ++ Y+ +I L + + AL + +Q G
Sbjct: 502 LINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTG 561
Query: 237 IKPDIVCYTMVLNGV----------------------------IVQEDYVK------AEE 262
KPDI+ Y +V++ + + E + K A +
Sbjct: 562 HKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTHNTIMEGFYKVGNCEMASK 621
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
++ +L L PD+ +YN+ + GLC V + + G P IT+N L++A+
Sbjct: 622 IWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAV 680
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 177/392 (45%), Gaps = 39/392 (9%)
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEF----------------IFIDLIKTYADA 129
+I TLA++ QF ++L+ I R+ +P I L+ YA++
Sbjct: 81 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANS 140
Query: 130 HRFQDSVNLF--YKIPKFR---------INRVGFA------IEILNCMINDGFCVDGKTC 172
QD++ +F ++ F+ +N + A ++ M+ G +
Sbjct: 141 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ + C+ D+ E L + EM+ + Y +I KK ++ALGI ++M
Sbjct: 201 NVLIHACCKSGDVEKAEQL--LNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRM 258
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ G+ PDIV Y ++ G + +A LF E + G P+ TY I+G C+ N++
Sbjct: 259 ERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHVTYTTLIDGYCRVNDL 316
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
E +++ ME G P V+TYN++L+ LC+ ++ L+ EM + + + T + +
Sbjct: 317 EEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTL 376
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+ GD+ A + ++ L GL F I G C+ V A E L +M D
Sbjct: 377 INAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGF 436
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
SP + L+ S + + + IRL D++
Sbjct: 437 SPSYSTYSWLVDSYYDQDN--KEAVIRLPDEL 466
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 148/348 (42%), Gaps = 29/348 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSV 136
P ++ +I ++ +L+ +E R F P+ F + LI Y +++
Sbjct: 195 PNIHIFNVLIHACCKSGDVEKAEQLLNEMESR--FIFPDLFTYNTLISLYCKKGMHYEAL 252
Query: 137 NLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ + R+ R G + +I+ N +I GFC +G+ E L
Sbjct: 253 GI-----QDRMERGGVSPDIVTYNSLIY-GFCREGRM----------------REALRLF 290
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+E+ G V YT +I + + +AL + M+ +G+ P +V Y +L + +
Sbjct: 291 REIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEE 348
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
A L +E+ + PD T N IN CK ++ + +K+ M E G KPD T+
Sbjct: 349 GKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTF 408
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
L+ CK+ E++ +E + EM G + TYS ++D + + L +E
Sbjct: 409 KALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSR 468
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
KGL S++ I LC+ + A + M K + + V+ +L
Sbjct: 469 KGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSL 516
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +LN M D TC+ ++++ C+ D+ S + ++M + G + +
Sbjct: 354 ANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGS--AMKVKKKMLEAGLKPDQFTFKAL 411
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K +V A L +M G P Y+ +++ Q++ L DEL GL
Sbjct: 412 IHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGL 471
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D+ Y I LCK + +E+ ++ M+ G K D + Y +L A K + +
Sbjct: 472 FVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASD 531
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
++ EM + +++ L+ Y A G I+
Sbjct: 532 MLDEMDKRRLMITLKIYRCFSASYAGDGSIL 562
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 163/357 (45%), Gaps = 34/357 (9%)
Query: 100 SSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLF-------YKIP-------- 143
S V + I + + + +F +F L+ Y ++ +D+V F ++P
Sbjct: 49 SDVFEAILETKGTQRSDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVL 108
Query: 144 ----KFRINRV--GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL---GFV 194
+FR ++ F E+L C G SL ++ QR E+
Sbjct: 109 EHLMEFRYFKLVWDFYKEVLEC---------GYPASLYFFNILMQRFCKEGEMRLAQSVF 159
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ K G +V + +I +K + + + + M + G +PD+ Y++++NG+ +
Sbjct: 160 DAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKE 219
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A ELF+E+L GLVP+ T+ I+G CK V+ +++ M G PD+ITY
Sbjct: 220 GKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITY 279
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTL+ LCK EL ++ +L+ EM G+ + +Y+ +IDG +GD+ A L + +
Sbjct: 280 NTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQ 339
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+ + + I LC+ G A ++L++M + P + ++ K D
Sbjct: 340 ESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRD 396
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ +A + N+M +G+ P+ V +T +++G E A E++ ++L
Sbjct: 209 YSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL PD+ TYN I GLCK+ ++ +I M G KPD I+Y TL+ CK +L
Sbjct: 269 SQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL +M + I L+ Y+ +I L +G +A +L E L+ GL + + I
Sbjct: 329 IALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPG 415
C++ + A +LL++M PG
Sbjct: 389 NEFCKKRDSKTASKLLREMQRDGPLPG 415
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ + M G D T S++++ +C++ L DE EM G V +T
Sbjct: 190 GFRLK--SAMHASGAQPDVYTYSILINGLCKEGKL--DEANELFNEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K EKV A+ I QM S G+ PD++ Y ++ G+ + + + +L DE+++
Sbjct: 246 TLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD +Y I+G CK+ ++E +++ M + + D + Y L+ LC+ +
Sbjct: 306 GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ K D A LL E G
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+EI M++ G D T + ++ +C++ +L ++ + EM G +
Sbjct: 256 KVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELK--QVHDLIDEMIMNGLKPDKIS 313
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +I K+ + AL + N+M + I+ D V YT +++ + + AE++ E+L
Sbjct: 314 YTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREML 373
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+GL PD TY + IN CK+ + + K++ M+ G P V+T
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E L +EM G + Y + I L K ++ DA+ L+ M ++ + PD+V Y ++
Sbjct: 628 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLI 687
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G + +KA LFDEL + L P + TYN ++GLC+Q +E ++ M G
Sbjct: 688 YGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 747
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD++TY L+ CK+ L+ +E EM +G+ L+ Y+ I G GD A L
Sbjct: 748 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 807
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
EE L KG +++ + GLC+ G + +A ELL++
Sbjct: 808 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 106/232 (45%)
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
G + EM K G Y +I K + +AL + +M G P + Y + G+
Sbjct: 596 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGL 655
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
A + ++L L+PDV +YN I G C+ N+ + + + P +
Sbjct: 656 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 715
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TYNTLL LC+ EL ++L EM +GI ++ TY+I+++G G + A +E
Sbjct: 716 VTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 775
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L++GL S + I G + G +A L ++M K P ++ ++
Sbjct: 776 MLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVV 827
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%)
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
KK V L + ++M + PD+ +L + ++ KA E++ + G+ P +
Sbjct: 482 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 541
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYN ++ CK V+ G+ +++ M+ G P+ +TYN L+ L K E + + L+ EM
Sbjct: 542 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 601
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
G+ ++ TY+ +I G +KG + EA L EE + KG + ++ I GLC+ G +
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 661
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
A++ L M ++ P + L+
Sbjct: 662 SDAMQQLSDMLANNLLPDVVSYNTLI 687
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 136/273 (49%), Gaps = 2/273 (0%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
+ + + MI D K C+ IL + +DL S + + + M + G +V Y ++
Sbjct: 490 LSVFDKMIKSRLSPDVKNCNRILR-ILRDKDLMSKAVEVY-RTMGEFGIKPTIVTYNTLL 547
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
S K KV L +L++M+ G P+ V Y +++NG+ + ++ +A+ L E+L GL
Sbjct: 548 DSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLK 607
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
YTYN I G + + + + M G+ P V TYN+ + LCK+ ++ +
Sbjct: 608 VSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQ 667
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ +M ++ ++ +Y+ +I G G++++A L +E + L ++ + GLC+
Sbjct: 668 LSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCR 727
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
+G + A +L +M ++ ++P + L+ S
Sbjct: 728 QGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 760
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 176/433 (40%), Gaps = 35/433 (8%)
Query: 14 LRKHRKWPLSPYKAKWH-------QTLDQQQA----KQNVKQSLTTPPTKQ-------QQ 55
L+ +R P+S YK + +D + A ++ VK ++ TPP + +
Sbjct: 302 LKSYRSCPVSSYKNSHSAEAGGPMKVIDGRSALWVSEEKVKVAVCTPPFSETHFQDVISK 361
Query: 56 QIPKQPHILSS---LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
I ++P S+ L H F +P + + V+ + + + + E + F
Sbjct: 362 SIREKPSNFSNYYWLSHQFGPVIVDP--DLFVRVLSSFRTSPRMA--LRLFRWAESQPGF 417
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
EF+F +++ A + + + + ++ ++R I++ +I G CV +
Sbjct: 418 RRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR------IVDVLI--GGCVSSEVS 469
Query: 173 SLILSSVCEQRDLSS--DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
IL + S ++ L +M K + + ++R L K+ + A+ +
Sbjct: 470 VKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYR 529
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M GIKP IV Y +L+ + +L E+ G P+ TYNV INGL K+
Sbjct: 530 TMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG 589
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
E +I M + G K TYN L+ L L +EM KG + TY+
Sbjct: 590 EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYN 649
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I GL G + +A L + L L ++ I G C+ G + KA L ++
Sbjct: 650 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI 709
Query: 411 DVSPGARVWEALL 423
+ P + LL
Sbjct: 710 YLFPTIVTYNTLL 722
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 177/392 (45%), Gaps = 39/392 (9%)
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEF----------------IFIDLIKTYADA 129
+I TLA++ QF ++L+ I R+ +P I L+ YA++
Sbjct: 81 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANS 140
Query: 130 HRFQDSVNLF--YKIPKFR---------INRVGFA------IEILNCMINDGFCVDGKTC 172
QD++ +F ++ F+ +N + A ++ M+ G +
Sbjct: 141 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ + C+ D+ E L + EM+ + Y +I KK ++ALGI ++M
Sbjct: 201 NVLIHACCKSGDVEKAEQL--LNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRM 258
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ G+ PDIV Y ++ G + +A LF E + G P+ TY I+G C+ N++
Sbjct: 259 ERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHVTYTTLIDGYCRVNDL 316
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
E +++ ME G P V+TYN++L+ LC+ ++ L+ EM + + + T + +
Sbjct: 317 EEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTL 376
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+ GD+ A + ++ L GL F I G C+ V A E L +M D
Sbjct: 377 INAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGF 436
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
SP + L+ S + + + IRL D++
Sbjct: 437 SPSYSTYSWLVDSYYDQDN--KEAVIRLPDEL 466
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 148/348 (42%), Gaps = 29/348 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSV 136
P ++ +I ++ +L+ +E R F P+ F + LI Y +++
Sbjct: 195 PNIHIFNVLIHACCKSGDVEKAEQLLNEMESR--FIFPDLFTYNTLISLYCKKGMHYEAL 252
Query: 137 NLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ + R+ R G + +I+ N +I GFC +G+ E L
Sbjct: 253 GI-----QDRMERGGVSPDIVTYNSLIY-GFCREGRM----------------REALRLF 290
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+E+ G V YT +I + + +AL + M+ +G+ P +V Y +L + +
Sbjct: 291 REIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEE 348
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
A L +E+ + PD T N IN CK ++ + +K+ M E G KPD T+
Sbjct: 349 GKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTF 408
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
L+ CK+ E++ +E + EM G + TYS ++D + + L +E
Sbjct: 409 KALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSR 468
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
KGL S++ I LC+ + A + M K + + V+ +L
Sbjct: 469 KGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSL 516
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 2/211 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +LN M D TC+ ++++ C+ D+ S + ++M + G + +
Sbjct: 354 ANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGS--AMKVKKKMLEAGLKPDQFTFKAL 411
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K +V A L +M G P Y+ +++ Q++ L DEL GL
Sbjct: 412 IHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGL 471
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D+ Y I LCK + +E+ ++ M+ G K D + Y +L A K + +
Sbjct: 472 FVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASD 531
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
++ EM + +++ L+ Y A G I+
Sbjct: 532 MLDEMDKRRLMITLKIYRCFSASYAGDGSIL 562
>gi|147791423|emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 150/324 (46%), Gaps = 22/324 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y + TLA+ +F I +L+H +K+ N + E + L+ Y A F+ + LF +
Sbjct: 21 YEKAVLTLAKAKKFSFIEDILEH-QKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDEX 79
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLG 201
PK R + N +++ CV K D++ GF QE+ LG
Sbjct: 80 PKLNCERT---VVSFNALLS--VCVXSKKF---------------DKIDGFFQELPGNLG 119
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V Y ++ + + + AL +L++M+ G++PD++ + +LN Y E
Sbjct: 120 VVPDVVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGE 179
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+++D + + P+V +YN + G+ +N + +++I M+ G KPDV T N+L++
Sbjct: 180 KIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGF 239
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C L + E+ + TY +I L KGD A L +E ++ +
Sbjct: 240 CNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEP 299
Query: 382 SMFDETICGLCQRGLVRKALELLK 405
++ + + GL + + +A EL++
Sbjct: 300 ALLQQVLEGLVKESKIEEATELVE 323
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 74/168 (44%), Gaps = 7/168 (4%)
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL----GSKPDVITYN 315
A +LFDE L V ++N ++ + K+ +EL G PDV++YN
Sbjct: 72 AHKLFDEXPKLNCERTVVSFNALLSVCVXSKKFD---KIDGFFQELPGNLGVVPDVVSYN 128
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++ A C++ L+ ++ EM+ G+ +L T++ +++ G + + +
Sbjct: 129 IIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKN 188
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ + G+ + +A+EL+ +M + P +L+
Sbjct: 189 NVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLM 236
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLL 369
V+++N LL ++ +++ +E+ G+V ++ +Y+I+++ G + A +L
Sbjct: 88 VVSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSALSVL 147
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+E GL F+ + Q G ++ M +V+P R + A L +S+
Sbjct: 148 DEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGVISE 207
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 162/368 (44%), Gaps = 22/368 (5%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLI- 123
+SLLH+ + P HF+ ++ + C SS L +N+ IF ++
Sbjct: 123 NSLLHTLLLRESHPKCVFSHFL-----DSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVI 177
Query: 124 -------KTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+ +N K+ KF E+ + +N G D TCS ++
Sbjct: 178 VKLMFANNLLPEVRTLSALLNGLLKVRKFIT-----VWELFDESVNAGVRPDPYTCSAVV 232
Query: 177 SSVCEQRD-LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
S+CE +D L + E ++ M+ GF +V Y +I L K ++V +A+ + +
Sbjct: 233 RSMCELKDFLRAKEK---IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGK 289
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ D+V Y ++ G + + +L DE++ LG P + ++GL KQ ++
Sbjct: 290 GLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDA 349
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+++ + G P++ YN L+ +LCK +L++ L M + N TYSI+ID
Sbjct: 350 YELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDS 409
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G + A + + G+ ++ I G C+ G + A L +M +K V P
Sbjct: 410 FCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPT 469
Query: 416 ARVWEALL 423
A + +L+
Sbjct: 470 ATTFTSLI 477
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 20/298 (6%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFA--IEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
D R Q ++ Y++ ++ R GF + + N +IN S+C+ DL
Sbjct: 338 DGLRKQGKIDDAYELV-VKVGRFGFVPNLFVYNALIN---------------SLCKGGDL 381
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
ELL M + + Y+ +I S + ++ A+ ++M DGI + Y
Sbjct: 382 DKAELL--YSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYN 439
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++NG D AE LF E+ G+ P T+ I+G CK V+ K+ M +
Sbjct: 440 SLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDN 499
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P+V T+ L+ LC ++ EL E+ + I TY+++I+G G I +A
Sbjct: 500 GITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKA 559
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LLE+ KGL + + I GLC G V KA + + + ++V + ALL
Sbjct: 560 FELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALL 617
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 152/346 (43%), Gaps = 24/346 (6%)
Query: 80 PEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y F +I L ++ + S + D + +R+ + E + LI+ Y
Sbjct: 503 PNVYTFTALISGLCSTNKMAEASELFDELVERK-IKPTEVTYNVLIEGYC---------- 551
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
R ++ A E+L M G D T ++S +C +S + F+ ++
Sbjct: 552 --------RDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAK--DFIDDL 601
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K + Y+ ++ ++ ++ +AL +M GI D+VC+ ++++G + Q D
Sbjct: 602 HKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDR 661
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+L ++ GL PD Y I+ K+ + + + M P+V+TY L
Sbjct: 662 KTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTAL 721
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LCK E++R L K M+ + N TY +D L +G++ EA G L A+ KGL
Sbjct: 722 MNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIG-LHHAMLKGL 780
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + I G C+ G +A ++L +M + + P + L+
Sbjct: 781 LANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLI 826
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + I++++ M+ GF S ++ + +Q + D+ V ++ + GF
Sbjct: 307 RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKI--DDAYELVVKVGRFGFVPN 364
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I SL K + A + + M ++P+ + Y+++++ A FD
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFD 424
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ VY YN ING CK ++ A + M G +P T+ +L+ CK
Sbjct: 425 RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDL 484
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + +L +M GI N+ T++ +I GL S + EA L +E + + + ++
Sbjct: 485 QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYN 544
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ G + KA ELL+ M K + P + L+
Sbjct: 545 VLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLI 582
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 123/246 (50%), Gaps = 2/246 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
+G T S+++ S C L D + + M + G + Y ++I K + A
Sbjct: 399 NGITYSILIDSFCRSGRL--DVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAES 456
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ +M + G++P +T +++G KA +L+++++ G+ P+VYT+ I+GLC
Sbjct: 457 LFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLC 516
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
N + ++ + E KP +TYN L++ C+ ++++ EL+++M KG+V +
Sbjct: 517 STNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTY 576
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY +I GL S G + +A +++ + + + + G CQ G + +AL +M
Sbjct: 577 TYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEM 636
Query: 408 ADKDVS 413
+ ++
Sbjct: 637 IQRGIN 642
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 144/340 (42%), Gaps = 41/340 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ AI + MI DG + +++ C+ DLS+ E L F+ EM G
Sbjct: 412 RSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESL-FI-EMTNKGVEPT 469
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+T++I K +V A + N+M +GI P++ +T +++G+ +A ELFD
Sbjct: 470 ATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFD 529
Query: 266 ELL------------VL-----------------------GLVPDVYTYNVYINGLCKQN 290
EL+ VL GLVPD YTY I+GLC
Sbjct: 530 ELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTG 589
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
V I + + K + + Y+ LL C+ L EM +GI ++L ++
Sbjct: 590 RVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHA 649
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++IDG + D LL++ ++GL + ++ I + G +KA E M +
Sbjct: 650 VLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTE 709
Query: 411 DVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTP 448
+ P + AL+ L ++D F R+ Q N P
Sbjct: 710 ECFPNVVTYTALMNGLCKAGEMDRAGLLFKRM--QAANVP 747
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 112/233 (48%), Gaps = 1/233 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F+ K+ F + + ++++ V ++FDA+ I+ M ++ + P++ + +LNG++
Sbjct: 143 FLDSYKRCKFS-STLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLL 201
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
++ ELFDE + G+ PD YT + + +C+ + + I ME G ++
Sbjct: 202 KVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIV 261
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYN L+ LCK ++ E+ + + KG+ ++ TY ++ G L++E
Sbjct: 262 TYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEM 321
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G + + GL ++G + A EL+ ++ P V+ AL+ S
Sbjct: 322 VELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINS 374
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 144/338 (42%), Gaps = 24/338 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y +I L + +D + K +N + E + L+ Y R ++++
Sbjct: 573 PDTYTYRPLISGLCSTGRVSKAKDFIDDLHK-QNVKLNEMCYSALLHGYCQEGRLMEALS 631
Query: 138 LFYKIPKFRINRVGFAIEILNC-MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+C MI G +D ++++ +Q D + +++
Sbjct: 632 A-------------------SCEMIQRGINMDLVCHAVLIDGALKQPDRKT--FFDLLKD 670
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M G V YT++I + K+ A + M ++ P++V YT ++NG+ +
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGE 730
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A LF + + P+ TY +++ L K+ N++ I + M + G + +T+N
Sbjct: 731 MDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNI 789
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+++ CK+ + +++ EM GI + TYS +I G++ + L + LN+G
Sbjct: 790 IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRG 849
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L ++ I G C G + KA EL M + + P
Sbjct: 850 LEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 11/248 (4%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
F DL+K D D+V I + + A E + M+ + + T + +++
Sbjct: 664 FFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMN 723
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+C+ ++ LL + M+ + Y + +L K+ + +A+G+ + M G+
Sbjct: 724 GLCKAGEMDRAGLL--FKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GL 780
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+ V + +++ G + +A ++ E+ G+ PD TY+ I C+ NV A +K
Sbjct: 781 LANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVK 840
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M G +PD++ YN L+ C EL++ EL +M +GI+ + + L
Sbjct: 841 LWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKY-------LQ 893
Query: 358 SKGDIIEA 365
KG I EA
Sbjct: 894 KKGTIFEA 901
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 32/312 (10%)
Query: 72 SIYNCEPPPEAYHFVIKTLAENSQFC---DISSVLDHIEKRENFETPEFIFI--DLIKTY 126
S++ C P Y+ +I FC +IS + +EK EN P+ I ++
Sbjct: 238 SVHGCPPNTVTYNCLIDA------FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGL 291
Query: 127 ADAHRFQDSVNLFYK----IPK---------------FRINRVGFAIEILNCMINDGFCV 167
A R ++ F + P+ N VG A+E+ + +++G
Sbjct: 292 CRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSP 351
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D ++S + + L ++ MK+ GF Y +I +K+++ +A
Sbjct: 352 DAIMYFTMISGLTQAGRL--EDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYE 409
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +MK GI+PD+ Y +L+G D+ +EL +++ G P V T+ ++G C
Sbjct: 410 LLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYC 469
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K ++ ++++ M+E G P+ + YNTL+ LCK +++ EL EMK K + N+
Sbjct: 470 KVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVT 529
Query: 348 TYSIMIDGLASK 359
T++ ++ GL K
Sbjct: 530 TFNALLKGLRDK 541
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 135/281 (48%), Gaps = 6/281 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A E++ M N+G + T + I+ +C R + L F +E K+ + G
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLC--RAGRTGAALEFFRE-KRTVWPEG 314
Query: 206 ---MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V Y+ ++ +L+ V A+ + ++ S+G PD + Y +++G+ A
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ + G D YN+ I G C++ + +++ M+E+G +PDV TYNTLL C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K + + EL+ +M G ++ T+ ++ G G I EA +L G+ +
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+++ I LC+RG V A+EL +M +K V + ALL
Sbjct: 495 IYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L + ++ DA + + MK G K D Y +++ G ++ +A EL E+
Sbjct: 356 YFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK 415
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+G+ PDV TYN ++G CK + A +++ M + G +P VIT+ TL+ CKV +++
Sbjct: 416 EVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+++ M GI N Y+ +ID L +GD+ A L +E K + + F+ +
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
GL + + KA EL+ QM ++ P
Sbjct: 536 KGLRDKNMPEKAFELMDQMREERCFP 561
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 47/288 (16%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVI----VQEDYVK 259
+V Y ++ L K +V DAL +L+ M I+PD+V V++G+ VQE
Sbjct: 172 VVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAF 231
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG------------- 306
E+ V G P+ TYN I+ C+ N+ +++ ME G
Sbjct: 232 VEQRMSS--VHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 307 ------------------------SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
K + +TY+TL+ AL + EL E +G
Sbjct: 290 GLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH 349
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ Y MI GL G + +AC + G + ++ I G C++ + +A E
Sbjct: 350 SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYE 409
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
LL++M + + P + LL S DF L+ ++++ C+
Sbjct: 410 LLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVD--ELLGKMIDDGCQ 455
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACM--EELGSKPDVITYNTLLQALCKVRELNRLR 331
PDV TY + +NGLCK V ++++ M ++L +PDV+T NT++ LCK +
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 332 ELVKEM--KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
V++ G N TY+ +ID G+I A L+E+ N+G+ + +
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 390 GLCQRGLVRKALELLKQ 406
GLC+ G ALE ++
Sbjct: 290 GLCRAGRTGAALEFFRE 306
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 107 EKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK---------FRINRVGF---- 152
EK +P+ I + +I A R +D+ ++ + + + I GF
Sbjct: 343 EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402
Query: 153 ----AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-DELLGFVQEMKKLGFCFGMV 207
A E+L M G D T + +LS C+ D ++ DELLG +M G ++
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLG---KMIDDGCQPSVI 459
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ ++ K K+ +AL IL M GI P+ V Y +++ + + D A ELFDE+
Sbjct: 460 TFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ +V T+N + GL +N E +++ M E PD +T + L++ L + E
Sbjct: 520 KEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGET 579
Query: 328 NRLRELVKE 336
+RL+ +++
Sbjct: 580 DRLKRFMQQ 588
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV--------LGLVPDVYTYNVYINGLCK 288
++PD+V Y +++NG+ KA + D L V L + PDV T N ++GLCK
Sbjct: 168 VRPDVVTYGILVNGL------CKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCK 221
Query: 289 QNNVEAGIKMIA-CMEEL-GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
V+ + + M + G P+ +TYN L+ A C+V ++ ELV++M+ +G+ N+
Sbjct: 222 SGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNI 281
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEAL-----NKGLCTQSSMFDETICGLCQRGLVRKAL 401
T + ++ GL G A E KG + + + L V A+
Sbjct: 282 VTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG---NAVTYSTLVGALLHTNNVGMAM 338
Query: 402 ELLKQMADKDVSPGARVW 419
EL + + SP A ++
Sbjct: 339 ELFHEKMSEGHSPDAIMY 356
>gi|56783835|dbj|BAD81247.1| fertility restorer -like [Oryza sativa Japonica Group]
Length = 1090
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 136/258 (52%), Gaps = 4/258 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL--GFCFGMVDYT 210
A+++ + M G VD + CS+I+S + + + L F + +++ GF G++ T
Sbjct: 151 ALKVFDVMAAAGCQVDDRVCSVIISGFSKVG--KAGDGLEFYRRVRREFNGFEPGLITLT 208
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+ L + + +A ++ +M+ G+ D V Y +++G + +K +L
Sbjct: 209 AFVDVLGRVGRTTEAAQLVREMEGKGLVGDAVLYGSLVHGYMSSGLLMKGLREHRVMLDK 268
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ DV +Y I+GLC++ +VE + + M +KP++ITY +L+ CK L+
Sbjct: 269 GIAADVVSYTTVIDGLCRERSVEKVMGFLDEMNRRDAKPNLITYTSLIGGFCKRNRLDDA 328
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+V++++ G+V++ YSI+ID L KG + A LLEE KG+ ++ I G
Sbjct: 329 FSIVRKLEQTGVVVDEYVYSILIDNLCKKGYLDRAFSLLEEMDKKGIKIGIVTYNSVING 388
Query: 391 LCQRGLVRKALELLKQMA 408
LC+ G +KA+E+ + +A
Sbjct: 389 LCKVGHTKKAVEIYEGIA 406
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F++E ++ G+ + Y+ ++ L K + AL + MK +GI+P+IV + VLNG+
Sbjct: 708 FLKEAEQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLC 767
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
Q +A LFD L ++P + TY++ I LC++ ++ ++ M G KP
Sbjct: 768 QQGCLTEAFRLFDYLESSEVLPTLVTYSILIAALCREGFLDDAHELFQKMSTKGIKPTTR 827
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
YN L+ C + EL+ + + + T +I+G KGDI A G E
Sbjct: 828 VYNLLISGYCNYGLTEKALELISHFEEIFLFPDAITIGAIINGHCLKGDIESALGFFSEY 887
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+K + F + GL +G + ++ +L++M
Sbjct: 888 YHKEMVPDFVGFMSLVKGLYAKGRMEESRSILREM 922
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 136/294 (46%), Gaps = 32/294 (10%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D + + ++ +C +R S ++++GF+ EM + ++ YT++I K+
Sbjct: 265 MLDKGIAADVVSYTTVIDGLCRER--SVEKVMGFLDEMNRRDAKPNLITYTSLIGGFCKR 322
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ DA I+ +++ G+ D Y+++++ + + +A L +E+ G+ + TY
Sbjct: 323 NRLDDAFSIVRKLEQTGVVVDEYVYSILIDNLCKKGYLDRAFSLLEEMDKKGIKIGIVTY 382
Query: 280 NVYINGLCKQNNVEAGIKM---IAC---------------------------MEELGSKP 309
N INGLCK + + +++ IA +E G
Sbjct: 383 NSVINGLCKVGHTKKAVEIYEGIAADNFTYSTLLHGHIKVEDATGVMAIKGRLESSGVTI 442
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DV+T N L++AL +++++ L M + N+ TY +ID + G+ A L
Sbjct: 443 DVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIVTYHTVIDMMCKLGETDRALQLF 502
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ L + + + + I LC G V A ++ + +++ P + ++ L+
Sbjct: 503 DDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQIFNDLIQRNLRPDSCTYKKLI 556
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 10/217 (4%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIV---CYTMVLNGVIVQE-DYVKAEELFDE 266
N++ + K V +A+G N M + + ++ YT+ G I+ +++K E
Sbjct: 658 NMLSCHLSKNSVGEAIGFSNYMNNGRVPVSVLREAVYTLKREGRILDACNFLKEAEQN-- 715
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
G D+ Y++ + GLCK +E + + M+E G +P+++ +N++L LC+
Sbjct: 716 ----GYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLCQQGC 771
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L L ++ ++ L TYSI+I L +G + +A L ++ KG+ + +++
Sbjct: 772 LTEAFRLFDYLESSEVLPTLVTYSILIAALCREGFLDDAHELFQKMSTKGIKPTTRVYNL 831
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C GL KALEL+ + + P A A++
Sbjct: 832 LISGYCNYGLTEKALELISHFEEIFLFPDAITIGAII 868
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 98/203 (48%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+ +L ++ ++ DA L + + +G D+ Y++++ G+ KA +L + + G
Sbjct: 692 AVYTLKREGRILDACNFLKEAEQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEG 751
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P++ +N +NGLC+Q + ++ +E P ++TY+ L+ ALC+ L+
Sbjct: 752 IQPNIVIHNSVLNGLCQQGCLTEAFRLFDYLESSEVLPTLVTYSILIAALCREGFLDDAH 811
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL ++M KGI + Y+++I G + G +A L+ L + I G
Sbjct: 812 ELFQKMSTKGIKPTTRVYNLLISGYCNYGLTEKALELISHFEEIFLFPDAITIGAIINGH 871
Query: 392 CQRGLVRKALELLKQMADKDVSP 414
C +G + AL + K++ P
Sbjct: 872 CLKGDIESALGFFSEYYHKEMVP 894
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 131/308 (42%), Gaps = 28/308 (9%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFY 140
+Y VI L + LD + +R+ P I + LI + +R D+ ++
Sbjct: 276 SYTTVIDGLCRERSVEKVMGFLDEMNRRD--AKPNLITYTSLIGGFCKRNRLDDAFSIVR 333
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
K+ + G VD S+++ ++C++ L D ++EM K
Sbjct: 334 KLEQ------------------TGVVVDEYVYSILIDNLCKKGYL--DRAFSLLEEMDKK 373
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G G+V Y +VI L K A+ I +GI D Y+ +L+G I ED
Sbjct: 374 GIKIGIVTYNSVINGLCKVGHTKKAVEIY-----EGIAADNFTYSTLLHGHIKVEDATGV 428
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ L G+ DV T NV I L V+ + M E+ +P+++TY+T++
Sbjct: 429 MAIKGRLESSGVTIDVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIVTYHTVIDM 488
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
+CK+ E +R +L + K + + ++ +I L + G + A + + + + L
Sbjct: 489 MCKLGETDRALQLFDDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQIFNDLIQRNLRPD 548
Query: 381 SSMFDETI 388
S + + I
Sbjct: 549 SCTYKKLI 556
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 99/214 (46%), Gaps = 2/214 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSD--GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I K K D L +++ + G +P ++ T ++ + +A +L E+
Sbjct: 173 IISGFSKVGKAGDGLEFYRRVRREFNGFEPGLITLTAFVDVLGRVGRTTEAAQLVREMEG 232
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
GLV D Y ++G + G++ M + G DV++Y T++ LC+ R + +
Sbjct: 233 KGLVGDAVLYGSLVHGYMSSGLLMKGLREHRVMLDKGIAADVVSYTTVIDGLCRERSVEK 292
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ + EM + NL TY+ +I G + + +A ++ + G+ ++ I
Sbjct: 293 VMGFLDEMNRRDAKPNLITYTSLIGGFCKRNRLDDAFSIVRKLEQTGVVVDEYVYSILID 352
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC++G + +A LL++M K + G + +++
Sbjct: 353 NLCKKGYLDRAFSLLEEMDKKGIKIGIVTYNSVI 386
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+KE + G ++L YSI+++GL G + +A L E +G+ + + + GLC
Sbjct: 708 FLKEAEQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLC 767
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
Q+G + +A L + +V P V ++L++++ + F++ +
Sbjct: 768 QQGCLTEAFRLFDYLESSEVLP-TLVTYSILIAALCREGFLDDA 810
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 182/383 (47%), Gaps = 24/383 (6%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDIS---SVLDHIEKRENFETPE 116
P + +SL+ +F I+ + E H + K L D++ + +D + K E
Sbjct: 492 NPVVYTSLIRNFFIHGRK---EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 548
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE---ILNCMINDGFCVDGKTCS 173
IF D I++Y F V Y I + + G A E I + M GF +D + +
Sbjct: 549 MIFED-IRSYG----FLPDVR-SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYN 602
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ C+ + + ++EMK+ + Y ++ L K +++ +A + + K
Sbjct: 603 AVVDGFCKSGKVH--KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
S GI+ ++V Y+ +++G +A + +E++ GL P+VYT+N ++ L K +
Sbjct: 661 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 720
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ M+E+ P+ TY+ L+ LC+V++ N+ ++M+ +G+V N+ TY+ MI
Sbjct: 721 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 780
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GLA G+I +A L E G ++ F+ I G+ +A ++ ++ +
Sbjct: 781 SGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLR--- 837
Query: 414 PGARVWEALLLSSVSKLDFVNTS 436
G R+ + S +S LD +N S
Sbjct: 838 -GCRIN---IKSCISLLDALNKS 856
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 162/365 (44%), Gaps = 24/365 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQ 133
+ EP Y+ +I L + + +LD +E F P + ++ ++ A + +
Sbjct: 383 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF--PNLLTVNIMVDRLCKARKLE 440
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++ YKI + R + C + DG G+ DE
Sbjct: 441 EA----YKIFESASQRGCNPDCVTYCSLIDGLGKKGQV----------------DEAYRL 480
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++M G V YT++IR+ + D I ++ G KPD+ ++ V
Sbjct: 481 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFK 540
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ K +F+++ G +PDV +Y++ I+GL K + M++ G D
Sbjct: 541 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 600
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN ++ CK ++++ E+++EMK K + + TY ++DGLA + EA L EEA
Sbjct: 601 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
+KG+ ++ I G + G + +A +L++M K ++P W + LL ++ K + +
Sbjct: 661 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS-LLDALVKAEEI 719
Query: 434 NTSFI 438
N + +
Sbjct: 720 NEALV 724
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
I ++S G PD+ Y+++++G+ + +F + G D YN ++G C
Sbjct: 550 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 609
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K V +++ M+E +P V TY ++ L K+ L+ L +E K KGI LN+
Sbjct: 610 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
YS +IDG G I EA +LEE + KGL ++ + L + + +AL + M
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 729
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
+ P + ++L++ + ++ N +F+
Sbjct: 730 KEMKCPPNTYTY-SILINGLCRVQKYNKAFV 759
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 3/269 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++L M G+ + + C+ + +++ R L D+ + V M++L F YT +I
Sbjct: 130 KVLEEMAVLGYGLPNQACAHLAAALVRARRL--DDAVLAVAVMRRLKFRPAFSAYTVLIG 187
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L + + AL +L QM+ G + + +T ++ + + A L DE+ L P
Sbjct: 188 ALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEP 247
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D+ YNV I+ K NV+ K ++ G KPD ++Y +++ LCK L EL
Sbjct: 248 DIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF 307
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M+ + V Y+ MI G S G +A LLE +G F+ + L ++
Sbjct: 308 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK 367
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
V +AL L + M KD P + + ++
Sbjct: 368 RKVDEALSLFEVM-KKDAEPNSSTYNIII 395
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 153/374 (40%), Gaps = 20/374 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S S C P Y +I L + Q + + + + + P ++ LI+ +
Sbjct: 445 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP-VVYTSLIRNF 503
Query: 127 ADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDG 169
R +D +F ++ + F+ V I + + GF D
Sbjct: 504 FIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 563
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
++ S+++ + + + E MK+ GF Y V+ K KV A IL
Sbjct: 564 RSYSILIHGLTKAGQ--ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 621
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+MK ++P + Y +++G+ + +A LF+E G+ +V Y+ I+G K
Sbjct: 622 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 681
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
++ ++ M + G P+V T+N+LL AL K E+N + MK N TY
Sbjct: 682 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 741
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
SI+I+GL +A ++ +GL + I GL + G + A L ++
Sbjct: 742 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 801
Query: 410 KDVSPGARVWEALL 423
P A + AL+
Sbjct: 802 NGGIPDAASFNALI 815
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
++ +++ G +V + +++ L KK KV +AL + MK D +P+ Y ++++ +
Sbjct: 341 LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLC 399
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ +A + DE+ L P++ T N+ ++ LCK +E K+ + G PD +
Sbjct: 400 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 459
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY +L+ L K +++ L ++M G N Y+ +I G + + +E
Sbjct: 460 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 519
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +G ++ + + + + G V K + + + P R + L+
Sbjct: 520 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 570
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Query: 258 VKAEELFDELLVLGLV------PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
V+A L D +L + ++ P Y V I L + E ++++ M+E+G + V
Sbjct: 155 VRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGV 214
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+ TL++AL + ++ LV E+K + ++ Y++ ID G++ A E
Sbjct: 215 HLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHE 274
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+GL + I LC+ G + +A EL QM + P A + +++ S
Sbjct: 275 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 334
Query: 432 F 432
F
Sbjct: 335 F 335
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S++++ +C R ++ F Q+M+K G +V YT +I L K + DA +
Sbjct: 740 TYSILINGLC--RVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 797
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ K++G PD + ++ G+ ++A ++F+E + G ++ + ++ L K
Sbjct: 798 RFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSE 857
Query: 291 NVEAGIKMIACMEELG 306
+E + A + E+
Sbjct: 858 CLEQAAIVGAVLREIA 873
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 178/384 (46%), Gaps = 30/384 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENF-ETPEFIFIDLIK 124
LL + CEP +Y+ V+K L ++ D+ ++ + + E + PE ++
Sbjct: 200 LLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLR 259
Query: 125 TYA--------DAHRFQDSVNLFYKIPKFRI--NRVGF---------------AIEILNC 159
YA D H + + ++ ++P + + N V + A ++L
Sbjct: 260 MYATIIDGICKDGHH-EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 318
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M + +D T ++++ C+ + D ++ +++M + G ++ YT VI K+
Sbjct: 319 MFQEDCPLDDVTFNILVDFFCQNGLV--DRVIELLEQMLEHGCIPDVITYTTVINGFCKE 376
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
V +A+ +L M + G KP+ + YT+VL G+ E +V A+EL ++ G +P+ T+
Sbjct: 377 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 436
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N IN +CK+ E I+++ M G PD+I+Y+T++ L K + EL+ M
Sbjct: 437 NTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMIN 496
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KGI N YS M L+ +G + + + + + + +++++ I LC+R +
Sbjct: 497 KGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDR 556
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A++ M P + L+
Sbjct: 557 AIDFFAYMVSNGCMPNESTYTILI 580
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 149/348 (42%), Gaps = 68/348 (19%)
Query: 79 PPEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
PP AY + ++++L D +VLD + R TP + +++ F+ +V
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHV-ILEAACRGGGFRSAV 163
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
A+++L+ G +D C+L++S++CEQ
Sbjct: 164 R---------------ALQVLH---AKGCTLDSGNCNLVVSAICEQ-------------- 191
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
G VD + + +L ++ S G +PDIV Y VL G+ + +
Sbjct: 192 --------GCVD---------------EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKR 228
Query: 257 YVKAEELFDELLVL----------GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ EEL E++ + G PD+ Y I+G+CK + E +++ M G
Sbjct: 229 WDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYG 288
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KP+V+ YNT+L+ LC +L+ EM + L+ T++I++D G +
Sbjct: 289 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI 348
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
LLE+ L G + I G C+ GLV +A+ LLK M+ P
Sbjct: 349 ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 396
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 24/220 (10%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + S C+P +Y V+K L ++ D ++ H+ ++ P F LI
Sbjct: 385 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP-VTFNTLINFM 443
Query: 127 ADAHRFQDSVNLFYKI------PKF-----------RINRVGFAIEILNCMINDGFCVDG 169
+ ++ L ++ P + + A+E+LN MIN G +
Sbjct: 444 CKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN- 502
Query: 170 KTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
++I SS+ R+ +D+++ ++ Y VI SL K+ + A+
Sbjct: 503 ---TIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAID 559
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
M S+G P+ YT+++ G+ + +A++L EL
Sbjct: 560 FFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 3/153 (1%)
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G V YN I G C+ V A ++ + P+ TY ++++LC +
Sbjct: 71 GDAAGVVAYNAMIAGYCRAGQVAAARRL---AAAVPVPPNAYTYFPIVRSLCARGLIADA 127
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
++ EM +G ++++ G A L+ KG S + +
Sbjct: 128 LTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSA 187
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+C++G V + +ELL+++ P + A+L
Sbjct: 188 ICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 172/397 (43%), Gaps = 62/397 (15%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C +AY FV+++LA+ V + + K E+ + LI + +A F +
Sbjct: 6 CAIGGDAYDFVVQSLAKAGMLAQALEVFETM-KSESCVPSLVTYNVLINSRCNAGEFGKA 64
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
++LF + R RV N +I+ G C G T + +
Sbjct: 65 LDLFQSMK--REKRVEPDRWTYNTLIS-GLCSSGNT----------------EGARKLLS 105
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM+ + Y+++I+SLVK+ K ++ +L +M + G PD+ + V+ G
Sbjct: 106 EMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSN 165
Query: 256 DYVKAEELFDELL-------------------------------------VLGLVPDVYT 278
+ KA E++ ++ G VP+V T
Sbjct: 166 NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVIT 225
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
++ I+GLC+ +E +++ M E G KP+ TY TL+ LC+ ++ + REL ++M
Sbjct: 226 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMT 285
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM--FDETICGLCQRGL 396
I + Y+ +I G +G + EA L E ++ G Q ++ F+ I G C+ G
Sbjct: 286 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE-MSGGAGLQPTIVTFNTLIDGFCKLGK 344
Query: 397 VRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ +A EL+ +M K ++ + L+ LS +KLD
Sbjct: 345 LGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLD 381
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 6/291 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM--KKLGFC 203
R N + A E+ M+ G+ D + +++ + + L DE L + EM + G+
Sbjct: 163 RSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKL--DESLKILSEMAMRAAGYV 220
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
++ ++ +I L + ++ AL + M G KP+ YT ++ G+ E ++A EL
Sbjct: 221 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQAREL 280
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE-LGSKPDVITYNTLLQALC 322
F+++ + PD YN I G CK+ +++ K+ M G +P ++T+NTL+ C
Sbjct: 281 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 340
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L R ELV EM KG+ + TY I+I GL+ + EA + ++ K
Sbjct: 341 KLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 400
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
+ GLC+ G + +A + + P + +L S+ KL V
Sbjct: 401 SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFR-ILSESLIKLGRV 450
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M K G Y V++SL K + AL + MKS+ P +V Y +++N +
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 257 YVKAEELFDELLVLGLV-PDVYTYNVYINGLCKQNNVEAGIKMIACM------------- 302
+ KA +LF + V PD +TYN I+GLC N E K+++ M
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120
Query: 303 -------------------EEL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
EE+ G PDV +N ++Q + + + RE+ + M
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK--GLCTQSSMFDETICGLCQRGLVR 398
G + +Y I+I GLA G + E+ +L E + G F I GLC+ G +
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
KALE+ M + P + L+
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLI 265
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 148/340 (43%), Gaps = 10/340 (2%)
Query: 79 PPEAYHFVIKTLAE--NSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P E+Y + + +A N + V+ + N E ++ ++++ +
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 137 NLFYKIPKFRINRVGFAIEILN--CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
L + + K I ++ +++IL+ M G+ + T S ++ +C +L ++ L
Sbjct: 192 -LIHGLAK--IGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGEL--EKALEVF 246
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
M + G YT +I L + EKV A + +M I PD V Y ++ G +
Sbjct: 247 GSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 306
Query: 255 EDYVKAEELFDELLV-LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+AE+L+ E+ GL P + T+N I+G CK + +++A M G D T
Sbjct: 307 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCT 366
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y L+ L + +L+ E+ K+M+ K +L+ + + GL G+I +A + E
Sbjct: 367 YRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATR 426
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
G F L + G V A +L++ +D++
Sbjct: 427 KSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDIT 466
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 27/337 (8%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGF--------------- 152
+ P F L+ ++ A R Q++V F ++ F F
Sbjct: 136 RAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVI 195
Query: 153 --AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
A+ + N M++ G C+ T ++L +R ++ D L F EM + G + YT
Sbjct: 196 LLALALYNRMVSSG-CLPNSTTYIVLMDGLCKRGMAVDALKMF-DEMLERGIVPDVKIYT 253
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI----VQEDYVKAEELFDE 266
++ SL + ++ DA +L MK +G PD V YT+ L+G+ V E + + E L D
Sbjct: 254 VLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDG 313
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
LGL+ Y+ I+GL + + G+ M PD+ Y L++ +
Sbjct: 314 GFTLGLI----GYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGR 369
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
L+ EMK KG V + Y+ ++ L G+I A L+ E L + S+ +
Sbjct: 370 TKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNI 429
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
ICGLC++GL+ KA+++ +M + P + AL+
Sbjct: 430 MICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALI 466
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 13/249 (5%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE L + EM + YT +IR + + DA +L++MK G PD CY +
Sbjct: 336 DEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTL 395
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L + + +A+ L E+L +V D T+N+ I GLCK+ ++ +++ M E G
Sbjct: 396 LKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGC 455
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKW-------------KGIVLNLQTYSIMID 354
P V+TYN L+ L + L R L +M+ V + ++ ++D
Sbjct: 456 HPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVD 515
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G+ G +++A LL + G+ ++ I GLC+ + AL L K++ K +SP
Sbjct: 516 GMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISP 575
Query: 415 GARVWEALL 423
+ L+
Sbjct: 576 DEITYGTLI 584
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 33/299 (11%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
++ LI+ +A+A R +D A +L+ M + GF D + +L
Sbjct: 356 LYTILIRRFAEAGRTKD------------------AFLLLDEMKDKGFVPDTFCYNTLLK 397
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
++ + ++ D + EM + + +I L KK + A+ + ++M G
Sbjct: 398 ALFDVGNI--DRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGC 455
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDEL-----------LVLGL--VPDVYTYNVYIN 284
P ++ Y +++G+ +A LF ++ L LG V D + ++
Sbjct: 456 HPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVD 515
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G+C+ V K++ + E G PDV+TYNTL+ LCK + L+ L KE++ KGI
Sbjct: 516 GMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISP 575
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ TY +IDGL +A L + L G +++ + LC+ + +A+ L
Sbjct: 576 DEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINL 634
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 139/340 (40%), Gaps = 50/340 (14%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P Y +I+ AE + D +LD + K + F F + L+K
Sbjct: 351 SPDITLYTILIRRFAEAGRTKDAFLLLDEM-KDKGFVPDTFCYNTLLKAL---------- 399
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
F + + A +++ M+ + +D T ++++ +C++ + D+ + E
Sbjct: 400 --------FDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLI--DKAMQVFDE 449
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP--------------DIV 242
M + G ++ Y +I L + + +A + ++M+ G P D
Sbjct: 450 MGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEM-GNNPSLFLRLTLGANQVRDTE 508
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+++G+ +KA +L ++ G+VPDV TYN INGLCK N++ +++ +
Sbjct: 509 SLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKEL 568
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+ G PD ITY TL+ L + N L + + G +L Y+ M+ L +
Sbjct: 569 QLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKL 628
Query: 363 IEACGLLEEAL--------------NKGLCTQSSMFDETI 388
+A L + L N C + DET+
Sbjct: 629 SQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETV 668
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 40/227 (17%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +I L K + + AL + +++ GI PD + Y +++G+ A LF
Sbjct: 542 VVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQ 601
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM-----------------IA----CMEE 304
+L G P + YN + LC+ + I + IA C E+
Sbjct: 602 NILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFED 661
Query: 305 ----------------LGS-KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
GS P+ Y + LC+VR+++ + ++ GIV+
Sbjct: 662 GFLDETVKELIKIDQVYGSLNPN--PYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPA 719
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+++I+ L ++ A ++ L+K + + + LC R
Sbjct: 720 CCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIR 766
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L M +GF + + +L+ E RD ++ L F +K G Y +++
Sbjct: 258 LLAQMEEEGFQGNLGLYTTVLNGFAEIRD--EEKCLSFFHRLKACGLSPTAATYGCIVKL 315
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K + AL IL +M G+ P+ + Y M+++G D+ A +++++++ GL PD
Sbjct: 316 FTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPD 375
Query: 276 VYTYNVYINGLCKQ-----------------------------------NNVEAGIKMIA 300
+ TYN+ ++ CK +++ +++
Sbjct: 376 IVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFD 435
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
++ G +P V++YN+LL L K R++ R ++ EM G+V N ++Y+ + +G A G
Sbjct: 436 RIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAG 495
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
D+ +A G+ + + L + + C+ G +++A+E+ +Q+ D
Sbjct: 496 DVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITD 544
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 156/366 (42%), Gaps = 21/366 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
S H P Y ++K + +L+ ++K + I+ ++
Sbjct: 292 SFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKH-GVSPNKMIYAMIMDG 350
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
YA F A ++ M++ G D T ++++ + C+ +
Sbjct: 351 YARGGDFTA------------------AFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRM 392
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D+ LG ++ ++ + YT+++ VK + AL + +++K+ G++P +V Y
Sbjct: 393 --DKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYN 450
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+L+G+ A + DE+L G+VP+ +Y G + +VE M M++
Sbjct: 451 SLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE 510
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
D++ Y LL+A CK + R E+ +++ G+ N TY M+DG A KG++ +A
Sbjct: 511 NLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKA 570
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
LL++ G + + I + G + E L M +K + AR + L+
Sbjct: 571 RDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHG 630
Query: 426 SVSKLD 431
++ D
Sbjct: 631 WLAAAD 636
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G + Y +++++ + + +L QM+ +G + ++ YT VLNG D K F
Sbjct: 235 GGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFF 294
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
L GL P TY + K N+ + ++ M++ G P+ + Y ++ +
Sbjct: 295 HRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARG 354
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ ++ ++M G+ ++ TY+I++ G + +A G+LE L +
Sbjct: 355 GDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETY 414
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
+ G + G ++KALE+ ++ + PG + + LLS ++K + + + L + +
Sbjct: 415 TSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNS-LLSGLAKARQMENARLMLDEML 473
Query: 445 LN 446
N
Sbjct: 474 AN 475
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 35/250 (14%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT++I + + + A+ +M S GI+ + + +++G + AE F++
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 228
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE-- 326
LVP YN + C+ N+E ++A MEE G + ++ Y T+L ++R+
Sbjct: 229 AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEE 288
Query: 327 -----LNRLR----------------------------ELVKEMKWKGIVLNLQTYSIMI 353
+RL+ ++++EM G+ N Y++++
Sbjct: 289 KCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIM 348
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DG A GD A + E+ ++ GL ++ + C+ G + KAL +L+ + +
Sbjct: 349 DGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLL 408
Query: 414 PGARVWEALL 423
P + ++L
Sbjct: 409 PTIETYTSIL 418
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A M++ IKP++ YT +++ D A +E+L G+ + + I+
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 209
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G N EA + P I YN+++QA C+ + + L+ +M+ +G
Sbjct: 210 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 269
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
NL Y+ +++G A D + GL ++ + + + G + KAL++L
Sbjct: 270 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDIL 329
Query: 405 KQMADKDVSPGARVWEALLLSSVSKLDFV 433
++M VSP ++ ++ DF
Sbjct: 330 EEMDKHGVSPNKMIYAMIMDGYARGGDFT 358
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 89/203 (43%), Gaps = 2/203 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L+ M+ +G + ++ + + D+ ++ G Q MKK +V Y ++++
Sbjct: 468 MLDEMLANGVVPNERSYTALTEGYARAGDV--EKAFGMFQRMKKENLAIDIVAYGALLKA 525
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K + A+ + Q+ G+K + + Y +L+G + + KA +L ++ G D
Sbjct: 526 CCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLD 585
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
Y +I + + E + +A M E + + TY TL+ + ++ +
Sbjct: 586 TICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYE 645
Query: 336 EMKWKGIVLNLQTYSIMIDGLAS 358
+ K G+ L+ + ++ GL S
Sbjct: 646 QAKASGLQLDSALSNCLLSGLIS 668
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P + Y + ++ + + A M KP+V Y +L+ A + R++
Sbjct: 129 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 188
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+EM +GI LN + +I G AS G+ A E+ + L +++ + CQ
Sbjct: 189 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 248
Query: 394 RGLVRKALELLKQMADK 410
G + LL QM ++
Sbjct: 249 AGNMETVEALLAQMEEE 265
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 174/413 (42%), Gaps = 74/413 (17%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK---------------- 124
E Y + + LA + F + S+++ + R+ + +FI L++
Sbjct: 119 ETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMI 178
Query: 125 TYADAHRFQDSVNLFYKIPKFR-----------INRV----------GFAIEILNCMIND 163
TY D D++ F K R ++R+ GF +EIL+
Sbjct: 179 TYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDA---- 234
Query: 164 GFCVDGKTCSLILSSVCEQRDLSS---------------------------------DEL 190
GF ++ +++++ C++ ++S DE
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+M+K + Y+ +I +L K+ K+ A G+ ++M G+ P+ V +T +++G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ +E + ++L GL PD+ YN +NG CK ++ A ++ M G +PD
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
ITY TL+ C+ ++ E+ KEM GI L+ +S ++ G+ +G +I+A L
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E L G+ + + C++G + +LLK+M P + LL
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 147/341 (43%), Gaps = 21/341 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
++ ++ + D V D I KR + + F LI Y + L +++
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKR-SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
K R F T S +++++C++ + D G EM K G
Sbjct: 302 EKSRTRPDVF------------------TYSALINALCKENKM--DGAHGLFDEMCKRGL 341
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V +T +I + ++ +M S G++PDIV Y ++NG D V A
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ D ++ GL PD TY I+G C+ +VE +++ M++ G + D + ++ L+ +C
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K + ++EM GI + TY++M+D KGD LL+E + G
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + GLC+ G ++ A LL M + V P + LL
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D + +++ C+ DL + V M + G + YT +I +
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAAR--NIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
V AL I +M +GI+ D V ++ ++ G+ + + AE E+L G+ PD TY
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ++ CK+ + + G K++ M+ G P V+TYN LL LCK+ ++ L+ M
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 340 KGIVLNLQTYSIMIDG 355
G+V + TY+ +++G
Sbjct: 549 IGVVPDDITYNTLLEG 564
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 191/436 (43%), Gaps = 63/436 (14%)
Query: 43 KQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSV 102
+ T P + IP Q +S + S+ + ++ +I+ A + F + V
Sbjct: 32 RSKTTLSPYESDAPIPDQIFKSASQMGSY-----KSGDSTFYSLIENYANSGDFGTLFQV 86
Query: 103 LDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK-IPKFRINRVGFAI-EILNCM 160
D + KRE E FI + + Y AH + ++ LF + + +F+ R + +LN +
Sbjct: 87 FDRM-KRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVI 145
Query: 161 INDGF---------C-VDGKT--------CSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
I +G C V GKT +L++ ++C+ + D + +EM
Sbjct: 146 IQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLV--DRAIEVFREMAIQKC 203
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y ++ L K++++ +A+ +L++M+ +G P V + +++NG+ + D V+ +
Sbjct: 204 EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTK 263
Query: 263 LFDELLVLGLVPDVYTYNV-----------------------------------YINGLC 287
L D + + G VP+ TYN INGL
Sbjct: 264 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 323
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
KQ G+ +++ +EE G + Y+TL+ L K + L K+M KG N+
Sbjct: 324 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 383
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
YS +IDGL +G + EA +L E +NKG + + I G + G +KA+ + K+M
Sbjct: 384 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 443
Query: 408 ADKDVSPGARVWEALL 423
A + P + L+
Sbjct: 444 AKNNCVPNEICYSVLI 459
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 161/362 (44%), Gaps = 41/362 (11%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C P Y +I L + + D +L +E+R + E+ + LI
Sbjct: 298 SLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH-HANEYAYSTLISG 356
Query: 126 YADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+ ++++ L+ K+ + + N V ++ I DG C +GK
Sbjct: 357 LFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALI------DGLCREGKL------------ 398
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
DE + EM G Y+++I+ K A+ + +M + P+ +C
Sbjct: 399 ----DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEIC 454
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM- 302
Y+++++G+ +A ++ +L GL PDV Y+ I+GLC +VE G+K+ M
Sbjct: 455 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514
Query: 303 -EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
+E S+PDV+TYN LL+ALCK ++ +L+ M +G +L T +I ++ L
Sbjct: 515 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL----- 569
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
E LN DE + L +R + A ++++ M K + P A WE
Sbjct: 570 --------REKLNPPQ-DGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWER 620
Query: 422 LL 423
++
Sbjct: 621 II 622
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 121/245 (49%), Gaps = 4/245 (1%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y +I LVK+ + D + +L+ ++ G + Y+ +++G+ +E +A L+ +
Sbjct: 313 VTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKK 372
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G P++ Y+ I+GLC++ ++ +++ M G P+ TY++L++ K
Sbjct: 373 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 432
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + KEM V N YS++I GL G + EA + L +GL +
Sbjct: 433 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 492
Query: 387 TICGLCQRGLVRKALELLKQM--ADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
I GLC G V L+L +M + D P + +LL ++ K + ++ + I L++ +
Sbjct: 493 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN-ILLRALCKQNSISHA-IDLLNSM 550
Query: 445 LNTPC 449
L+ C
Sbjct: 551 LDRGC 555
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 146/286 (51%), Gaps = 5/286 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCF 204
+++RV A+++ + + C D KT ++++ +C + + ELLG M G
Sbjct: 183 KLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV---MSGFGCEP 239
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI-KPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y +I+ K ++ A + +KS + PD+V YT +++G +A L
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
D++L LG+ P T+NV ++G K + ++ M G PDV+T+ +L+ C+
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
V ++++ L +EM +G+ N TYSI+I+ L ++ +++A LL + +K + Q M
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++ I G C+ G V +A ++++M K P + L++ K
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 20/321 (6%)
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFR-----------------INRVGFAIEILNCMIND 163
L+ T R +D++ LF + +F+ + + A+E+L M
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKV 222
G D T + ++ C+ +L+ + +++K C +V YT++I K K+
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEM--FKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+A +L+ M GI P V + ++++G + + AEE+ +++ G PDV T+
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+G C+ V G ++ M G P+ TY+ L+ ALC L + REL+ ++ K I
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ Y+ +IDG G + EA ++EE K F I G C +G + +A+
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 403 LLKQMADKDVSPGARVWEALL 423
+ +M SP +LL
Sbjct: 474 IFHKMVAIGCSPDKITVSSLL 494
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 7/273 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ CM +DG + + ++SS E+ L L +Q + G C MV ++
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL-LLQSFEVEGCC--MV-VNSL 177
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +LVK ++V DA+ + ++ D + +++ G+ KA EL + G
Sbjct: 178 LNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS--KPDVITYNTLLQALCKVRELNRL 330
PD+ TYN I G CK N + +M ++ GS PDV+TY +++ CK ++
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ +M GI T+++++DG A G+++ A + + ++ G F I G
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G V + L ++M + + P A + L+
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 9/249 (3%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + ++S C+ + E + +M +LG V + ++ K ++ A
Sbjct: 276 DVVTYTSMISGYCKAGKMR--EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
I +M S G PD+V +T +++G + L++E+ G+ P+ +TY++ IN LC
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 288 KQNNVEAGIKMIACMEELGSK---PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
+N + +K + +L SK P YN ++ CK ++N +V+EM+ K
Sbjct: 394 NENRL---LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ T++I+I G KG + EA + + + G + L + G+ ++A L
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-L 509
Query: 405 KQMADKDVS 413
Q+A K S
Sbjct: 510 NQIARKGQS 518
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
L + +TYN+ LCK + +M CM+ G P+ L+ + + +L+
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 330 LRE-LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L++ + +G + + + +++ L + +A L +E L C + F+ I
Sbjct: 157 ATALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC G KALELL M+ P + L+
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 146/312 (46%), Gaps = 38/312 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF--GMVDYT 210
AI +L M G D T + ++ + + L DE + ++EM + +V +
Sbjct: 274 AIGVLKKMSEKGVAPDVVTYNTLIKGLSDV--LEMDEAMWLLEEMVRGKNIVKPNVVTFN 331
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+VI+ L ++ A + M+ G ++V Y +++ G++ KA EL DE+ L
Sbjct: 332 SVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL 391
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP--------------------- 309
GL PD +TY++ I G CK V+ +++ M + G +P
Sbjct: 392 GLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERA 451
Query: 310 -------------DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
DV+ Y+T++ CK +L +EL+K + +G+ + TYSI+I+
Sbjct: 452 RNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
A GD+ A G+L++ G ++FD I G +G + K LEL+++M K+++ +
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571
Query: 417 RVWEALLLSSVS 428
++ L S V+
Sbjct: 572 KIISTLSTSLVA 583
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 126/239 (52%), Gaps = 4/239 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ ++C R +D+ +G ++ M+ G +V Y +IR L +V A+ ++ +M
Sbjct: 119 TVLMRALCADR--LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
GI+P++V Y+ +L G + ++F E+ G+ PDV Y I+ LCK
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M G +P+V+TYN L+ +CK + ++K+M KG+ ++ TY+ +
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSM--FDETICGLCQRGLVRKALELLKQMAD 409
I GL+ ++ EA LLEE + + ++ F+ I GLC G +R+A ++ M +
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE 355
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 109/201 (54%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT ++R+L A+G+L M+S G++ D+V Y ++ G+ + KA EL E
Sbjct: 116 VSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGE 175
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ P+V Y+ + G CK E K+ M E G +PDV+ Y L+ +LCKV +
Sbjct: 176 MCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK 235
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ ++ M +G+ N+ TY+++I+ + +G + EA G+L++ KG+ ++
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295
Query: 387 TICGLCQRGLVRKALELLKQM 407
I GL + +A+ LL++M
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEM 316
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 118/230 (51%), Gaps = 5/230 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
V Y V+ +L ++ A +L M + +P+ V YT+++ + +A L
Sbjct: 78 VSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGL 137
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+ G+ DV TY I GLC V+ ++++ M E G +P+V+ Y++LLQ CK
Sbjct: 138 LRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK 197
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ ++ EM KGI ++ Y+ +ID L G +A G+++ + +GL
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
++ I +C+ G V++A+ +LK+M++K V+P + L+ LS V ++D
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 147/316 (46%), Gaps = 25/316 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
+L S P Y+ +IK L++ + + +L+ + + +N P + F +I+
Sbjct: 276 GVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQ 335
Query: 125 TYADAHRFQDS-------------VNLF-YKI---PKFRINRVGFAIEILNCMINDGFCV 167
D R + + VNL Y + R+++V A+E+++ M + G
Sbjct: 336 GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP 395
Query: 168 DGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
D T S+++ C+ Q D + D + M+ G + Y ++ ++ ++ + A
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAED----LLSTMRDRGIEPELFHYIPLLVAMCEQGMMERA 451
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ N+M ++ D+V Y+ +++G D A+EL ++ GL PD TY++ IN
Sbjct: 452 RNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINM 510
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
K ++EA ++ M G PDV +++L+Q E+N++ EL++EM K I L+
Sbjct: 511 FAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALD 570
Query: 346 LQTYSIMIDGLASKGD 361
+ S + L + +
Sbjct: 571 SKIISTLSTSLVASNE 586
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK---GIVLNLQTYSIMIDGLAS 358
++ L S D ++YNT+L ALC+ +R L++ M + N +Y++++ L +
Sbjct: 68 LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+A GLL + G+ + I GLC V KA+EL+ +M + + P V
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187
Query: 419 WEALL 423
+ +LL
Sbjct: 188 YSSLL 192
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 26/230 (11%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ + EP Y +IK + Q +L + R E F +I L+
Sbjct: 384 LMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR-GIEPELFHYIPLLVAM 442
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL- 185
+ + + NLF ++ ++ F +D S ++ C+ DL
Sbjct: 443 CEQGMMERARNLFNEM-------------------DNNFPLDVVAYSTMIHGACKAGDLK 483
Query: 186 SSDELL-GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
++ ELL V E G V Y+ VI K + A G+L QM + G PD+ +
Sbjct: 484 TAKELLKSIVDE----GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVF 539
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
++ G + + K EL E++ + D + L N +A
Sbjct: 540 DSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKA 589
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 32/312 (10%)
Query: 72 SIYNCEPPPEAYHFVIKTLAENSQFC---DISSVLDHIEKRENFETPEFIFI--DLIKTY 126
S++ C P Y+ +I FC +IS + +EK EN P+ I ++
Sbjct: 238 SVHGCPPNTVTYNCLIDA------FCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGL 291
Query: 127 ADAHRFQDSVNLFYK----IPK---------------FRINRVGFAIEILNCMINDGFCV 167
A R ++ F + P+ N VG A+E+ + +++G
Sbjct: 292 CRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSP 351
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D ++S + + L ++ MK+ GF Y +I +K+++ +A
Sbjct: 352 DAIMYFTMISGLTQAGRL--EDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYE 409
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L +MK GI+PD+ Y +L+G D+ +EL +++ G P V T+ ++G C
Sbjct: 410 LLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYC 469
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K ++ ++++ M+E G P+ + YNTL+ LCK +++ EL EMK K + N+
Sbjct: 470 KVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVT 529
Query: 348 TYSIMIDGLASK 359
T++ ++ GL K
Sbjct: 530 TFNALLKGLRDK 541
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 135/281 (48%), Gaps = 6/281 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A E++ M N+G + T + I+ +C R + L F +E K+ + G
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLC--RAGRTGAALEFFRE-KRTVWPEG 314
Query: 206 ---MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V Y+ ++ +L+ V A+ + ++ S+G PD + Y +++G+ A
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ + G D YN+ I G C++ + +++ M+E+G +PDV TYNTLL C
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSC 434
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K + + EL+ +M G ++ T+ ++ G G I EA +L G+ +
Sbjct: 435 KAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNV 494
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+++ I LC+RG V A+EL +M +K V + ALL
Sbjct: 495 IYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L + ++ DA + + MK G K D Y +++ G ++ +A EL E+
Sbjct: 356 YFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMK 415
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+G+ PDV TYN ++G CK + A +++ M + G +P VIT+ TL+ CKV +++
Sbjct: 416 EVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+++ M GI N Y+ +ID L +GD+ A L +E K + + F+ +
Sbjct: 476 EALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALL 535
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
GL + + KA EL+ QM ++ P
Sbjct: 536 KGLRDKNMPEKAFELMDQMREERCFP 561
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 47/288 (16%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDG--IKPDIVCYTMVLNGVI----VQEDYVK 259
+V Y ++ L K +V DAL +L+ M I+PD+V V++G+ VQE
Sbjct: 172 VVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAF 231
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG------------- 306
E+ V G P+ TYN I+ C+ N+ +++ ME G
Sbjct: 232 VEQRMSS--VHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 307 ------------------------SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
K + +TY+TL+ AL + EL E +G
Sbjct: 290 GLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH 349
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ Y MI GL G + +AC + G + ++ I G C++ + +A E
Sbjct: 350 SPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYE 409
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
LL++M + + P + LL S DF L+ ++++ C+
Sbjct: 410 LLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVD--ELLGKMIDDGCQ 455
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACM--EELGSKPDVITYNTLLQALCKVRELNRLR 331
PDV TY + +NGLCK V ++++ M ++L +PDV+T NT++ LCK +
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 332 ELVKEM--KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
V++ G N TY+ +ID G+I A L+E+ N+G+ + +
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 390 GLCQRGLVRKALELLKQ 406
GLC+ G ALE ++
Sbjct: 290 GLCRAGRTGAALEFFRE 306
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 22/249 (8%)
Query: 107 EKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKIPK---------FRINRVGF---- 152
EK +P+ I + +I A R +D+ ++ + + + I GF
Sbjct: 343 EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402
Query: 153 ----AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-DELLGFVQEMKKLGFCFGMV 207
A E+L M G D T + +LS C+ D ++ DELLG +M G ++
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLG---KMIDDGCQPSVI 459
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ ++ K K+ +AL IL M GI P+ V Y +++ + + D A ELFDE+
Sbjct: 460 TFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ +V T+N + GL +N E +++ M E PD +T + L++ L + E
Sbjct: 520 KEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGET 579
Query: 328 NRLRELVKE 336
+RL+ +++
Sbjct: 580 DRLKRFMQQ 588
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 24/198 (12%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV--------LGLVPDVYTYNVYINGLCK 288
++PD+V Y +++NG+ KA + D L V L + PDV T N ++GLCK
Sbjct: 168 VRPDVVTYGILVNGL------CKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCK 221
Query: 289 QNNVEAGIKMIA-CMEEL-GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
V+ + + M + G P+ +TYN L+ A C+V ++ ELV++M+ +G+ N+
Sbjct: 222 SGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNI 281
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEAL-----NKGLCTQSSMFDETICGLCQRGLVRKAL 401
T + ++ GL G A E KG + + + L V A+
Sbjct: 282 VTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG---NAVTYSTLVGALLHTNNVGMAM 338
Query: 402 ELLKQMADKDVSPGARVW 419
EL + + SP A ++
Sbjct: 339 ELFHEKMSEGHSPDAIMY 356
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 148/324 (45%), Gaps = 22/324 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y + TLA+ + I +L+H E+ T E + L+ Y A F + LF ++
Sbjct: 60 YEKAVLTLAKAKKLSFIEDILEHQEQYNEIST-EVFAVRLMTLYGTAGMFDHAHKLFDEL 118
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLG 201
PK R + N +++ CV+ K D++ GF QE+ LG
Sbjct: 119 PKLNCERTVMS---FNALLSA--CVNSKKF---------------DKIDGFFQELPGNLG 158
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V Y ++ + + + AL +L++M+ G++PD++ + +LN Y E
Sbjct: 159 IVPDVVSYNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGE 218
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+++D + + P+V +YN + G+ +N + +++I M+ G KPDV T N+L++
Sbjct: 219 KIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGF 278
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C L + E+ + TY +I L KGD A L +E ++ +
Sbjct: 279 CNAGNLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFEMATELCKEVCSRRWLIEP 338
Query: 382 SMFDETICGLCQRGLVRKALELLK 405
++ + + GL + + +A EL++
Sbjct: 339 ALLQQVLEGLVKESKIEEATELVE 362
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 9/182 (4%)
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
M L G D+ A +LFDEL L V ++N ++ + K+ +EL
Sbjct: 99 MTLYGTAGMFDH--AHKLFDELPKLNCERTVMSFNALLSACVNSKKFD---KIDGFFQEL 153
Query: 306 ----GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
G PDV++YN L+ A C++ L+ ++ EM+ G+ +L T++ +++ G
Sbjct: 154 PGNLGIVPDVVSYNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGS 213
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ + + + ++ + G+ + +A+EL+ +M + P +
Sbjct: 214 YADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNS 273
Query: 422 LL 423
L+
Sbjct: 274 LM 275
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDG 355
K+ + +L + V+++N LL A ++ +++ +E+ GIV ++ +Y+I+++
Sbjct: 113 KLFDELPKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNA 172
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G + A +L+E GL F+ + Q G ++ M +V+P
Sbjct: 173 FCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPN 232
Query: 416 ARVWEALLLSSVSK 429
R + A L +S+
Sbjct: 233 VRSYNAKLRGVISE 246
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 141/298 (47%), Gaps = 7/298 (2%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F +D + + H + +N F+K + R GF ++ M G + + ++
Sbjct: 216 FCKMDRLGLVPNPHTYSVLMNGFFKQ---GLQREGF--QMYENMKRSGIVPNAYAYNCLI 270
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
S C + D+ EM++ G G++ Y +I L + +K +A+ +++++ G
Sbjct: 271 SEYCNGGMV--DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVG 328
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P+IV Y +++NG A LF++L GL P + TYN I G K N+ +
Sbjct: 329 LSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGAL 388
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++ MEE P +TY L+ A ++ + E+ M+ G+V ++ TYS++I GL
Sbjct: 389 DLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGL 448
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G++ EA L + L S +++ I G C+ G +AL LL +M + P
Sbjct: 449 CVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVP 506
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ MK+ G Y +I V A + +M+ GI ++ Y +++ G+
Sbjct: 252 ENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRG 311
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ + +A +L ++ +GL P++ TYN+ ING C ++ +++ ++ G P ++TY
Sbjct: 312 KKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTY 371
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTL+ KV L +LVKEM+ + I + TY+I+ID A +AC +
Sbjct: 372 NTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEK 431
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + I GLC G +++A +L K + + + P + ++ ++
Sbjct: 432 SGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMI 480
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ M G T ++++ +C + E + V ++ K+G +V Y +
Sbjct: 282 AFKVFAEMREKGIACGVMTYNILIGGLCRGKKFG--EAVKLVHKVNKVGLSPNIVTYNIL 339
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+ A+ + NQ+KS G+ P +V Y ++ G E+ A +L E+ +
Sbjct: 340 INGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P TY + I+ + N E +M + ME+ G PDV TY+ L+ LC + +
Sbjct: 400 APSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASK 459
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K + + N Y+ MI G +G A LL E ++ G+ + F TI LC
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLC 519
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWE 420
+ ++A LL QM + + P +++
Sbjct: 520 RDEKWKEAELLLGQMINSGLKPSVSLYK 547
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 131/267 (49%), Gaps = 5/267 (1%)
Query: 167 VDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
+D + +++ CE LL ++E G +V YT +I K V A
Sbjct: 156 LDAYSFGIMIKGCCEAGYFVKGFRLLAMLEE---FGLSPNVVIYTTLIDGCCKYGNVMLA 212
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ +M G+ P+ Y++++NG Q + ++++ + G+VP+ Y YN I+
Sbjct: 213 KNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISE 272
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
C V+ K+ A M E G V+TYN L+ LC+ ++ +LV ++ G+ N
Sbjct: 273 YCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPN 332
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ TY+I+I+G G + A L + + GL ++ I G + + AL+L+K
Sbjct: 333 IVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392
Query: 406 QMADKDVSPGARVWEALLLSSVSKLDF 432
+M ++ ++P ++V +L+ + ++L++
Sbjct: 393 EMEERCIAP-SKVTYTILIDAFARLNY 418
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ + V AL L+ M +G P + ++ +I + KA +F+EL
Sbjct: 92 YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+V D Y++ + I G C+ G +++A +EE G P+V+ Y TL+ CK +
Sbjct: 152 S-KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ L +M G+V N TYS++++G +G E + E G+ + ++ I
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G+V KA ++ +M +K ++ G + L+
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 121/264 (45%), Gaps = 34/264 (12%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGK--------- 170
LI +F ++V L +K+ N+VG + I+ N +IN GFC GK
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKV-----NKVGLSPNIVTYNILIN-GFCDVGKMDTAVRLFN 357
Query: 171 ------------TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
T + +++ + +L+ L V+EM++ V YT +I + +
Sbjct: 358 QLKSSGLSPTLVTYNTLIAGYSKVENLAGA--LDLVKEMEERCIAPSKVTYTILIDAFAR 415
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
A + + M+ G+ PD+ Y+++++G+ V + +A +LF L + L P+
Sbjct: 416 LNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVI 475
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I+G CK+ + ++++ M G P+V ++ + + LC+ + L+ +M
Sbjct: 476 YNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMI 535
Query: 339 WKGIVLNLQTYSIMIDGLASKGDI 362
G+ ++ Y ++ KGD+
Sbjct: 536 NSGLKPSVSLYKMVHK---VKGDV 556
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI +G D TCS IL C L+ +L +EM ++G V Y +I SL K
Sbjct: 347 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL--FREMYEMGLDPNHVSYATIINSLFKS 404
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A + +QM GI DIV T V++G+ +AEE+F+ +L L L P+ TY
Sbjct: 405 GRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTY 464
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ++G CK +E ++ ME+ P+VIT+++++ K L++ ++++EM
Sbjct: 465 SALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQ 524
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ ++ N Y+I+IDG G+ A +E ++ L + +FD + L + G + +
Sbjct: 525 RNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDE 584
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L+ M K + P + +L+
Sbjct: 585 ARSLIIDMYSKGIDPDIVNYASLI 608
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 116/233 (49%), Gaps = 1/233 (0%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L VQEMK+ F +V Y +I+ L++ K +D + ++M G+ PD + Y ++N
Sbjct: 621 LSIVQEMKEKNIRFDVVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDCITYNTIINT 679
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
++ A ++ +E+ G++P+ TYN+ I GLCK VE + M + P
Sbjct: 680 YCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPT 739
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
IT+ L++A + + +++ ++ +++ G+ L+L Y+ +I G +A +L+
Sbjct: 740 PITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLD 799
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E + +G+ ++ I G C V KAL+ QM ++P + LL
Sbjct: 800 EMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLL 852
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 147/337 (43%), Gaps = 17/337 (5%)
Query: 102 VLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNC 159
VL +EK E+ F +I YA +V++ ++ + + N + +AI I
Sbjct: 483 VLQKMEK-EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGY 541
Query: 160 M------INDGFCVDGKTCSLILSSVC-------EQRDLSSDELLGFVQEMKKLGFCFGM 206
+ D FC + K+ L S+V +R DE + +M G +
Sbjct: 542 FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDI 601
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V+Y ++I K+ AL I+ +MK I+ D+V Y ++ G++ Y +
Sbjct: 602 VNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSR 660
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ LGL PD TYN IN C + E + ++ M+ G P+ +TYN L+ LCK
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 720
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ + + EM V T+ ++ + + + E+ + GL ++++
Sbjct: 721 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 780
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I C+ G+ RKA +L +M + +S + AL+
Sbjct: 781 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALI 817
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 111/233 (47%), Gaps = 4/233 (1%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
M +LG + Y +I + K K DAL ILN+MKS GI P+ V Y +++ G+
Sbjct: 659 SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKT 718
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
KAE DE+LV+ VP T+ + + + +++ + G + + Y
Sbjct: 719 GAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVY 778
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTL+ C++ + + ++ EM +GI +L TY+ +I G + + +A +
Sbjct: 779 NTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFV 838
Query: 375 KGLCTQSSMFDETICGLCQRGL----VRKALELLKQMADKDVSPGARVWEALL 423
G+ + ++ + GL GL + + +L+ +M ++ + P A ++ L+
Sbjct: 839 DGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILV 891
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 6/274 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++ILN M + G + T ++++ +C+ + E + EM + F + + +
Sbjct: 689 ALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAE--SALDEMLVMEFVPTPITHKFL 746
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+++ + EK L I ++ + G++ + Y ++ KA+ + DE++ G+
Sbjct: 747 VKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGI 806
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV----RELN 328
D+ TYN I G C ++VE +K + M G P++ TYNTLL L +
Sbjct: 807 SADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMME 866
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+LV EM +G+V N TY I++ G G+ + L E + KG ++ I
Sbjct: 867 ETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLI 926
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ G + +A ELL + K P + ++ L
Sbjct: 927 SDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 960
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 4/213 (1%)
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
R +D++L +++ G + Y +I + A +L++M GI D+
Sbjct: 751 SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADL 810
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN----NVEAGIK 297
V Y ++ G KA + + ++ V G+ P++ TYN + GL +E K
Sbjct: 811 VTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEK 870
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+++ M E G P+ TY+ L+ +V + L EM KG V L+TY+++I A
Sbjct: 871 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 930
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
G +IEA LL + L KG S +D CG
Sbjct: 931 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 963
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 187/477 (39%), Gaps = 100/477 (20%)
Query: 33 LDQQQAKQNVKQSLTTPPTKQQQQIPKQP--HILSSLLHSFSIYNCEPPPEAYHFV---- 86
L + + + N +PPT+ ++ P SS +H SI+ PP + + +V
Sbjct: 6 LKKIRVQTNTLIFFFSPPTRLRRFFYPTPITRTFSSQIHKDSIF--IPPTKTHLYVSFFC 63
Query: 87 --IKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK--- 141
I+ + +F S+ H+ R P F + + +A V L Y
Sbjct: 64 TLIRLYLTHDRFSTASATFSHM--RALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121
Query: 142 ----IPK-FRIN-------RVG---FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+P F +N +VG A+ L ND +D T + ++ C++ +
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLV- 178
Query: 187 SDELLGFVQEMKKLGFCF---------------GMVDYTN-VIRSLVKKEKVFDALG--- 227
D+ G + EM K G CF G+V Y V+ +LV D +G
Sbjct: 179 -DQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT 237
Query: 228 -----------------ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-- 268
I N +SD +K DIV Y +L D +AE LF+E+L
Sbjct: 238 LIDGYCEAGLMSQATELIENSWRSD-VKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGF 296
Query: 269 -----------------VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ L P + TY I CK VE + M G PDV
Sbjct: 297 WKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDV 356
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+T +++L C+ +L L +EM G+ N +Y+ +I+ L G ++EA L +
Sbjct: 357 VTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQ 416
Query: 372 ALNKGLCTQSSMFDETIC-----GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +G+ FD C GL + G ++A E+ + + +++P + ALL
Sbjct: 417 MVVRGIS-----FDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALL 468
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 17/274 (6%)
Query: 167 VDGKTCSLILSSVCEQRDLSS-----DELLGFVQEMKKL------------GFCFGMVDY 209
+D T + +L + C+ DL+ +E+LGF ++ +L +V Y
Sbjct: 265 IDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTY 324
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +I + K V ++ + +M +GI PD+V + +L G +A LF E+
Sbjct: 325 TTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE 384
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+GL P+ +Y IN L K V + + M G D++T T++ L KV +
Sbjct: 385 MGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKE 444
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
E+ + + + N TYS ++DG G + A +L++ + + F I
Sbjct: 445 AEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIIN 504
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G ++G++ KA+++L++M ++V P V+ L+
Sbjct: 505 GYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILI 538
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 117/235 (49%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +EM++ +V + ++ SL K K+ +A + + M G PD+ Y ++L
Sbjct: 307 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 366
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG + V +LFD +L G+ PD YT+NV I ++ + + M + G K
Sbjct: 367 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV+TY T++ ALC++ +++ E +M +G+ + Y+ +I G + G +++A L
Sbjct: 427 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 486
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E +N G+ F I LC+ G V A + + + P A V+ L+
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 541
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 134/275 (48%), Gaps = 6/275 (2%)
Query: 173 SLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILN 230
S++L S+C+Q + +D+LL + E + C +V Y VI K+ V A +
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEGGAV--CSPNVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M GI PD+V Y V++ + KAE +++ ++P+ +TYN I G
Sbjct: 244 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 303
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ +++ M PDV+T + L+ +LCK ++ R++ M KG ++ +Y+
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
IM++G A+KG +++ L + L G+ F+ I G++ KA+ + +M D
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 411 DVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
V P + ++ L + K+D F +++DQ
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 458
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 172/419 (41%), Gaps = 56/419 (13%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P +Y+ ++ A D++ + D + + + F LIK YA+ ++
Sbjct: 357 PDVFSYNIMLNGYATKGCLVDMTDLFD-LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 415
Query: 138 LFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+F ++ RI ++ A+E N MI+ G D + ++ C
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 475
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
L + L + E+ G +V ++++I +L K +V DA I + + G+ PD
Sbjct: 476 THGSLLKAKEL--ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 533
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
V Y+M+++G + KA +FD ++ G+ P+V Y +NG CK ++ G+ +
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFR 593
Query: 301 CMEELGSKP-----------------------------------DVITYNTLLQALCKVR 325
M + G KP D+ TYN +L+ L K R
Sbjct: 594 EMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNR 653
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L KE++ + +N+ T + MIDG+ + EA L L +
Sbjct: 654 CFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYS 713
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
I L + GLV +A ++ M + P +R+ ++ + K + V +++ +D+
Sbjct: 714 IMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 772
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 124/268 (46%), Gaps = 2/268 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A I + +N G D S+++ C + ++ L M G
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKM--EKALRVFDAMVSAGIEPN 568
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ K ++ + L + +M GIKP + Y+++++G+ V A+ F
Sbjct: 569 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFH 628
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G+ D+ TYN+ + GL K + I + + + K ++IT NT++ + + R
Sbjct: 629 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 688
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++L + +V ++ TYSIMI L +G + EA + N G S + +
Sbjct: 689 RVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLN 748
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVS 413
+ L ++ + +A L ++ +++ S
Sbjct: 749 HVVRELLKKNEIVRAGAYLSKIDERNFS 776
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM + G +V Y +V+ +L K + A L QM + + P+ Y ++ G
Sbjct: 243 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 302
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +F E+ ++PDV T ++ + LCK ++ + M G PDV +Y
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N +L L + +L M GI + T++++I A+ G + +A + E +
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 422
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + I LC+ G + A+E QM D+ V+P + L+
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 471
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G + Y V+R L K +A+ + ++++ +K +I+ +++G+
Sbjct: 628 HEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQT 687
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A++LF + LVP V TY++ I L K+ VE M + M+ G +P+
Sbjct: 688 RRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLL 747
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
N +++ L K E+ R + ++ + L T +++D +SKG
Sbjct: 748 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 124/278 (44%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R A + + M G V + +L + D + E L V M G
Sbjct: 161 RARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEAL--VTRMDAAGVPLD 218
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y VI KK ++A+ + ++M +GI+ D V + +++G+ +A +LF
Sbjct: 219 RFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFT 278
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ PD TY I+G C+ N+E +K+ ME G P V TYN +L+ LC+
Sbjct: 279 EMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDG 338
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + +L+ EM + + + T + +I+ +G + AC + ++ + GL +
Sbjct: 339 KMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYK 398
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ + +A E QM D SP V+ L+
Sbjct: 399 ALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLV 436
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 135/306 (44%), Gaps = 11/306 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + + M +G D T + ++ +C+ + E EM V YT +
Sbjct: 238 AMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVK--EAAQLFTEMAAAQATPDNVTYTTL 295
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + + +A+ + +M++ G+ P + Y +L + + +L +E+ +
Sbjct: 296 IDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKV 355
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D T N IN CK+ ++ + K+ M E G + + TY L+ CK +EL+ +E
Sbjct: 356 QADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKE 415
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+M G N +S ++DG K + + +E + +GL +++ I LC
Sbjct: 416 AFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLC 475
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL---------LSSVSKLDFVNTSFIRLVDQ 443
++GLV +A ++ QM K + + V+ L +++ + LD + + + + Q
Sbjct: 476 RKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQ 535
Query: 444 ILNTPC 449
I N C
Sbjct: 536 IYNCLC 541
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%)
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L + + DAL + +QM++ G+ PD T +L + A +FDE+ GL
Sbjct: 124 LAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVS 183
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ YN ++ K + ++ M+ G D +YNT++ CK +
Sbjct: 184 THVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRD 243
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M +GI + T++ +I GL G + EA L E + + I G C+ G
Sbjct: 244 RMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAG 303
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+ +A++L +M + PG + A+L
Sbjct: 304 NIEEAVKLRGEMEATGMLPGVATYNAIL 331
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 1/234 (0%)
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
V Q D L F Q M+ G T ++ +L + A + ++M G+
Sbjct: 123 VLAQSARPHDALRVFDQ-MRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLA 181
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
Y +L+ + D +AE L + G+ D ++YN I CK+ + +
Sbjct: 182 VSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCV 241
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M++ G + D +T+N+L+ LCK + +L EM + TY+ +IDG
Sbjct: 242 RDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCR 301
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G+I EA L E G+ + ++ + LC+ G +++ +LL +M ++ V
Sbjct: 302 AGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKV 355
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 127/300 (42%), Gaps = 2/300 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ RV A ++ M D T + ++ C ++ +E + EM+ G G
Sbjct: 266 KYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNI--EEAVKLRGEMEATGMLPG 323
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++R L + K+ + +LN+M ++ D V ++N + A ++
Sbjct: 324 VATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKK 383
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ GL + +TY I+G CK ++ + M + G P+ ++ L+ CK
Sbjct: 384 KMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKN 443
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + + E+ +G+ + Y +I L KG + +A + ++ +KGL S ++
Sbjct: 444 NADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYA 503
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
G A L MA + +++ L S + + +N ++R +++ L
Sbjct: 504 TLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIYNCLCTSYADEKETLNILWVRAIERGL 563
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 163/357 (45%), Gaps = 34/357 (9%)
Query: 100 SSVLDHIEKRENFETPEF-IFIDLIKTYADAHRFQDSVNLF-------YKIP-------- 143
S V + I + + + +F +F L+ Y ++ +D+V F ++P
Sbjct: 49 SDVFEAILETKGTQISDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVL 108
Query: 144 ----KFRINRV--GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL---GFV 194
+FR ++ F E+L C G SL ++ QR E+
Sbjct: 109 EHLMEFRYFKLVWDFYKEVLEC---------GYPASLYFFNILMQRFCKEGEMRLAQSVF 159
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ K G +V + +I +K + + + + M + G +PD+ Y++++NG+ +
Sbjct: 160 DAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKE 219
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A ELF+E+L GLVP+ T+ I+G CK V+ +++ M G PD+ITY
Sbjct: 220 GKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITY 279
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NTL+ LCK EL ++ +L+ EM G+ + +Y+ +IDG +GD+ A L + +
Sbjct: 280 NTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQ 339
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+ + + I LC+ G A ++L++M + P + ++ K D
Sbjct: 340 ESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRD 396
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ +A + N+M +G+ P+ V +T +++G E A E++ ++L
Sbjct: 209 YSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL PD+ TYN I GLCK+ ++ +I M G KPD I+Y TL+ CK +L
Sbjct: 269 SQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL +M + I L+ Y+ +I L +G +A +L E L+ GL + + I
Sbjct: 329 IALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPG 415
C++ + A +LL++M PG
Sbjct: 389 NEFCKKRDSKTASKLLREMQRDGPVPG 415
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ + M G D T S++++ +C++ L DE EM G V +T
Sbjct: 190 GFRLK--SAMHASGAQPDVYTYSILINGLCKEGKL--DEANELFNEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K EKV A+ I QM S G+ PD++ Y ++ G+ + + + +L DE+++
Sbjct: 246 TLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD +Y I+G CK+ ++E +++ M + + D + Y L+ LC+
Sbjct: 306 GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ K D A LL E G
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ N M+++G +G T + ++ C+ + D + ++M G ++ Y +
Sbjct: 225 ANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKV--DLAMEIYKQMLSQGLSPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK ++ ++++M +G+KPD + YT +++G + D A EL ++++ +
Sbjct: 283 IYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+ LC++ KM+ M +G KPD TY ++ CK R+ +
Sbjct: 343 RLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L++EM+ G V + T
Sbjct: 403 LLREMQRDGPVPGVVT 418
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 142/319 (44%), Gaps = 47/319 (14%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+NR+G A ++ M+ G+ + + ++ +C+ +L + L + EM+K G +
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGEL--NIALELLNEMEKKGLGADV 211
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y ++ L + DA +L M I PD+V +T +++ + Q + +A+EL+ E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ + P+ TYN INGLC + K M G P+V+TYNTL+ CK R
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG-------------------DIIEACG 367
++ +L + M +G ++ TY+ +I G G DII C
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 368 LLEEALNKGLCTQSSM------FDE---------------TICGLCQRGLVRKALELLKQ 406
LL GLC + FD+ I GLC+ V KA EL +
Sbjct: 392 LLH-----GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446
Query: 407 MADKDVSPGARVWEALLLS 425
+ + V P AR + ++L
Sbjct: 447 LPVEGVKPDARTYTIMILG 465
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 112/231 (48%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F Q+M+ G + +T +I + ++ AL +L +M G +P IV + +L+G
Sbjct: 93 FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ A L ++ G P+V YN I+GLCK + ++++ ME+ G DV+
Sbjct: 153 LVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVV 212
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYNTLL LC + ++++M + I ++ T++ +ID +G++ EA L +E
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + ++ I GLC G + A + MA K P + L+
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 107/218 (49%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L + +M KLG+ +V + +++ ++ DA ++ M G +P++V Y +++G
Sbjct: 126 LSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + A EL +E+ GL DV TYN + GLC +M+ M + PD
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V+T+ L+ K L+ +EL KEM + N TY+ +I+GL G + +A +
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
+KG ++ I G C+ +V + ++L ++M+
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 156/378 (41%), Gaps = 39/378 (10%)
Query: 53 QQQQIPKQPHILS--SLLHSFSIYN----------------CEPPPEAYHFVIKTLAENS 94
+ ++ +P I++ SLLH F + N EP Y+ +I L +N
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 95 QFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAI 154
+ +L+ +EK+ + L+ + R+ D+ + + K IN
Sbjct: 191 ELNIALELLNEMEKK-GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP----- 244
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
D T + ++ +Q +L DE +EM + V Y ++I
Sbjct: 245 -------------DVVTFTALIDVFVKQGNL--DEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
L +++DA + M S G P++V Y +++G + +LF + G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D++TYN I+G C+ + + + M PD+IT+ LL LC E+
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M+ + + Y+IMI GL + +A L +G+ + + I GLC+
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 395 GLVRKALELLKQMADKDV 412
G R+A EL+++M ++ +
Sbjct: 470 GPRREADELIRRMKEEGI 487
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 208 DYTNVIRS-LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
DY +R+ + + DA + +M P IV +T +L Y +
Sbjct: 37 DYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQK 96
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + G+ D+Y++ + I+ C+ + + + ++ M +LG +P ++T+ +LL C V
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ LV M G N+ Y+ +IDGL G++ A LL E KGL ++
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC G A +L+ M + ++P + AL+
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 175/365 (47%), Gaps = 26/365 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYA--DAH-RFQDSVNL 138
Y ++ L + +F + ++L H K E E +F++L++ ++ D H + + NL
Sbjct: 92 TYSVLLDNLVRHKKFLAVDAIL-HQMKYETCRFQESLFLNLMRHFSRFDLHDKVMEMFNL 150
Query: 139 FYKIPKFRINRVGFAIEILNCMINDG---------------FCVDGKTC--SLILSSVCE 181
I + + + + LN +I+ G + TC ++++ C+
Sbjct: 151 IQVIARVKPSLNAIST-CLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCK 209
Query: 182 QRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSD-GIKP 239
D+ D V+EMK+ G + + Y+ ++ L + + +A+ + M S GI P
Sbjct: 210 NGDI--DSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISP 267
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
D V + +++NG + +A+ + D + G P+VY Y+ +NG CK+ ++ ++
Sbjct: 268 DPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVF 327
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
+++ G K D + Y TL+ LC+ E++ +L+ EMK + TY++++ GL+S+
Sbjct: 328 DEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSE 387
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
G EA +L++ +G+ + + LC G + KA++ L M+ + + P W
Sbjct: 388 GRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATW 447
Query: 420 EALLL 424
L++
Sbjct: 448 NELVV 452
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 110/233 (47%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F + K G V + +I + +V A IL+ MK +G P++ Y+ ++NG
Sbjct: 256 FEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFC 315
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ +A+++FDE+ GL D Y +N LC+ ++ +K++ M+ + D +
Sbjct: 316 KEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADAL 375
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYN +L+ L +++ + +G+ LN +Y I+++ L G++ +A L
Sbjct: 376 TYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVM 435
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+G+ + ++E + LC+ G + +L + P + W A++ S
Sbjct: 436 SKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVES 488
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 147/337 (43%), Gaps = 29/337 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIE--KRENFETPEFI-FIDLIKTYADAHRFQ 133
+P ++ ++K +N DI S +E KR P I + L+ R +
Sbjct: 194 QPNTCIFNILVKHHCKNG---DIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSK 250
Query: 134 DSVNLFYKIPKFRINRVGFAIE--ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
++V LF + I++ G + + I N MIN GFC G+ E+ + +L
Sbjct: 251 EAVELFEDM----ISKRGISPDPVIFNVMIN-GFCRSGEV---------ERAKM----IL 292
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
F MKK G + +Y+ ++ K+ K+ +A + +++K G+K D V YT ++N +
Sbjct: 293 DF---MKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCL 349
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ +A +L E+ D TYNV + GL + E ++M+ G +
Sbjct: 350 CRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNK 409
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+Y +L ALC EL + + + M +GI + T++ ++ L G+ +L
Sbjct: 410 GSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIG 469
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
L GL + + +C+ + ELL +A
Sbjct: 470 FLGIGLIPAPKSWGAVVESICKERKLVHVFELLDSLA 506
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 117/235 (49%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +EM++ +V + ++ SL K K+ +A + + M G PD+ Y ++L
Sbjct: 320 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 379
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG + V +LFD +L G+ PD YT+NV I ++ + + M + G K
Sbjct: 380 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 439
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV+TY T++ ALC++ +++ E +M +G+ + Y+ +I G + G +++A L
Sbjct: 440 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 499
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E +N G+ F I LC+ G V A + + + P A V+ L+
Sbjct: 500 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 554
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 134/275 (48%), Gaps = 6/275 (2%)
Query: 173 SLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILN 230
S++L S+C+Q + +D+LL + E + C +V Y VI K+ V A +
Sbjct: 199 SILLKSLCDQGKSGQADDLLRMMAEGGAV--CSPNVVAYNTVIDGFFKEGDVNKACDLFK 256
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M GI PD+V Y V++ + KAE +++ ++P+ +TYN I G
Sbjct: 257 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 316
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ +++ M PDV+T + L+ +LCK ++ R++ M KG ++ +Y+
Sbjct: 317 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 376
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
IM++G A+KG +++ L + L G+ F+ I G++ KA+ + +M D
Sbjct: 377 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 436
Query: 411 DVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
V P + ++ L + K+D F +++DQ
Sbjct: 437 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 471
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 172/419 (41%), Gaps = 56/419 (13%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P +Y+ ++ A D++ + D + + + F LIK YA+ ++
Sbjct: 370 PDVFSYNIMLNGYATKGCLVDMTDLFD-LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 428
Query: 138 LFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+F ++ RI ++ A+E N MI+ G D + ++ C
Sbjct: 429 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 488
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
L + L + E+ G +V ++++I +L K +V DA I + + G+ PD
Sbjct: 489 THGSLLKAKEL--ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 546
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
V Y+M+++G + KA +FD ++ G+ P+V Y +NG CK ++ G+ +
Sbjct: 547 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFR 606
Query: 301 CMEELGSKP-----------------------------------DVITYNTLLQALCKVR 325
M + G KP D+ TYN +L+ L K R
Sbjct: 607 EMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNR 666
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L KE++ + +N+ T + MIDG+ + EA L L +
Sbjct: 667 CFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYS 726
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
I L + GLV +A ++ M + P +R+ ++ + K + V +++ +D+
Sbjct: 727 IMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 785
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 2/268 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A I + +N G D S+++ C + ++ L M G
Sbjct: 524 KLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKM--EKALRVFDAMVSAGIEPN 581
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ K ++ + L + +M GIKP + Y+++++G+ V A+ F
Sbjct: 582 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFH 641
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G+ D+ TYN+ + GL K + I + + + K ++IT NT++ + + R
Sbjct: 642 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 701
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++L + +V N+ TYSIMI L +G + EA + N G S + +
Sbjct: 702 RVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLN 761
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVS 413
+ L ++ + +A L ++ +++ S
Sbjct: 762 HVVRELLKKNEIVRAGAYLSKIDERNFS 789
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM + G +V Y +V+ +L K + A L QM + + P+ Y ++ G
Sbjct: 256 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 315
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +F E+ ++PDV T ++ + LCK ++ + M G PDV +Y
Sbjct: 316 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 375
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N +L L + +L M GI + T++++I A+ G + +A + E +
Sbjct: 376 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 435
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + I LC+ G + A+E QM D+ V+P + L+
Sbjct: 436 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 484
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 20/243 (8%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
++ L+ Y R + ++LF ++ + I IL +I DG G+T +
Sbjct: 584 VYCTLVNGYCKIGRIDEGLSLFREMLQRGIK----PSTILYSIIIDGLFQAGRTVPAKMK 639
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
EM + G + Y V+R L K +A+ + ++++ +
Sbjct: 640 ----------------FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 683
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
K +I+ +++G+ +A++LF + LVP+V TY++ I L K+ VE
Sbjct: 684 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAED 743
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M + M+ G +P+ N +++ L K E+ R + ++ + L T +++D +
Sbjct: 744 MFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFS 803
Query: 358 SKG 360
SKG
Sbjct: 804 SKG 806
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 117/232 (50%)
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
G +M K G C +V +T ++R + + A + ++M S G+KPD + YT + G
Sbjct: 403 GMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGE 462
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ + KA + +E+ G PD+ TYNV INGLCK N + +++ M G PD
Sbjct: 463 LKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDH 522
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TY +++ A L + E+ +M KGI ++ TY+++I A +G + A +E
Sbjct: 523 VTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDE 582
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+KG+ ++ I GLC+ ++ A L +M K VSP + L+
Sbjct: 583 MQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILI 634
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 39/328 (11%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++ M G V T + ++ C++ +E +EM G +V Y +
Sbjct: 261 AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMF--EEANDLRREMLGRGALPTVVTYNTI 318
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ SL + +V DA L+ M ++ + PD+V Y ++ G ++ +A LF EL L
Sbjct: 319 MYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNL 378
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VP V TYN I+G C+ N++ M M + G PDV+T+ L++ C++ L +E
Sbjct: 379 VPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKE 438
Query: 333 LV-----------------------------------KEMKWKGIVLNLQTYSIMIDGLA 357
L +EMK +G +L TY+++I+GL
Sbjct: 439 LFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLC 498
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G+ +A L+++ +G+ + I GL+RKA E+ M K + P
Sbjct: 499 KLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVV 558
Query: 418 VWEALLLSSV--SKLDFVNTSFIRLVDQ 443
+ L+ S +LDF F + D+
Sbjct: 559 TYTVLIHSYAVRGRLDFAKKYFDEMQDK 586
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 37/290 (12%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+N+G D + C+ +L + ++ ++ E + V M K +V + ++ S K+
Sbjct: 163 MVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSV--MIKCQIRPTIVTFNTMMDSRCKE 220
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V A+ +L+ M+ G P+ V Y +++NG+ + ++ +A+EL +++ +LGL +TY
Sbjct: 221 GEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTY 280
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE------- 332
N I G CK+ E + M G+ P V+TYNT++ +LC++ ++ R
Sbjct: 281 NPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVN 340
Query: 333 ----------------------------LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
L E++ K +V ++ TY+ +IDG G++
Sbjct: 341 EDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDI 400
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
A G+ ++ + GLC F + G CQ G + A EL +M + + P
Sbjct: 401 AKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKP 450
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 123/274 (44%), Gaps = 2/274 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
VG A+E+L+ M G + + +++++ + + + D +++M LG Y
Sbjct: 223 VGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEF--DRAKELIEQMSMLGLKVSAHTY 280
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+IR KKE +A + +M G P +V Y ++ + A D ++
Sbjct: 281 NPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVN 340
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
L+PD+ +YN I G + N + + + + P V+TYNTL+ C+ L+
Sbjct: 341 EDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDI 400
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ + +M G+ ++ T++I++ G G++ A L +E L++GL + I
Sbjct: 401 AKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIV 460
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + G KA + ++M + P + L+
Sbjct: 461 GELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 2/198 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M +GF D T +++++ +C+ + D+ VQ+M+ G V YT++I + +
Sbjct: 478 MKAEGFPPDLITYNVLINGLCKLGNF--DDANELVQKMRLEGIVPDHVTYTSIIHAHLIS 535
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ A + + M GI P +V YT++++ V+ A++ FDE+ G+ P+V TY
Sbjct: 536 GLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITY 595
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N I GLCK+N ++ + A ME G P+ TY L+ ++ +L K+M
Sbjct: 596 NALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLD 655
Query: 340 KGIVLNLQTYSIMIDGLA 357
+ I + T+S ++ L+
Sbjct: 656 REIKPDSCTHSALMKHLS 673
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
I+P IV + +++ + + +A E+ D + + G P+ +YNV +NGL + +
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAK 262
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++I M LG K TYN L++ CK +L +EM +G + + TY+ ++ L
Sbjct: 263 ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSL 322
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G + +A L+ +N+ L ++ I G + G +AL L ++ K++ P
Sbjct: 323 CRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSV 382
Query: 417 RVWEALL 423
+ L+
Sbjct: 383 VTYNTLI 389
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 87/163 (53%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+F +++ GL+PDV N + L ++ V ++ + M + +P ++T+NT++ + C
Sbjct: 159 VFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRC 218
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K E+ R E++ M+ G N +Y+++++GL+ KG+ A L+E+ GL +
Sbjct: 219 KEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAH 278
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++ I G C++ + +A +L ++M + P + ++ S
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS 321
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+M K G +V YT +I S + ++ A ++M+ G+ P+++ Y ++ G+ +
Sbjct: 546 SDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKE 605
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
A LF E+ G+ P+ YTY + IN + +K+ M + KPD T+
Sbjct: 606 NMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTH 665
Query: 315 NTLLQALCK------VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG-DIIEACG 367
+ L++ L K V L L + E+ I + + + E G
Sbjct: 666 SALMKHLSKDYKLLAVLRLENLPLAIVEINSTWIAEGFVKLEESKNNSHFRAIHVFEKGG 725
Query: 368 LLEEALNKGLCTQSSMFDETIC 389
LE L K LC +S + IC
Sbjct: 726 FLEPFLGK-LCAKSRVLKALIC 746
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 118/217 (54%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ VI +L K + A+ +LN+MK I P+I Y +++G+ + K + L E++
Sbjct: 206 YSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMV 265
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L + P+V+T+++ I+GLCK+ VE +++ M E G +PD+ITY+ ++ C +++
Sbjct: 266 NLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVD 325
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
R R + ++ KGI N+ +YSI+I+G K ++ +A L E KGL + + +
Sbjct: 326 RARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTIL 385
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GL + G + A ++ +M +P + LL
Sbjct: 386 HGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFG 422
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 119/231 (51%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ EM L + ++ +I L K+ KV DA ++ M G++PDI+ Y+ +++G
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
++ +A +F+ L G+ P++++Y++ ING CK+ N+ +++ + + G KPD +
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY+T+L L +V + +++ EM G ++ +S ++ G G + EA L +
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
T S + I GLC+ VR+A + +++ + P R + ++
Sbjct: 440 ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMI 490
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 125/240 (52%), Gaps = 2/240 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D +T S+++ ++C +D++ D + + EMK+ + Y ++I L K +
Sbjct: 202 DVRTYSIVIDALC--KDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKT 259
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L++M + I P++ ++++++G+ + A+E+ ++ G+ PD+ TY+ ++G C
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ V+ ++ + + G KP++ +Y+ L+ CK + L + +L E+ KG+ +
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TYS ++ GL G I +A + +E L G + + G + GLV +A+ L ++
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 162/375 (43%), Gaps = 20/375 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL N +P Y VI L ++ ++L+ + K++N F + LI
Sbjct: 189 SLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM-KQKNIPPNIFTYNSLIDG 247
Query: 126 YADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVD 168
+++ L ++ IN +V A E++ MI G D
Sbjct: 248 LCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPD 307
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S I+ C + + D ++ G + Y+ +I KK+ + A+ +
Sbjct: 308 IITYSAIMDGYCLRGQV--DRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQL 365
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
++ G+KPD V Y+ +L+G+I A+++FDE+L +G PD+ ++ + G K
Sbjct: 366 FGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFK 425
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
VE + + + +E ++ Y ++ LCK + + +++ G++ +++T
Sbjct: 426 YGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRT 485
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y++MI G +G E G+L + + G + ++ + G + + + + +K+MA
Sbjct: 486 YNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMA 545
Query: 409 DKDVSPGARVWEALL 423
+ S A L+
Sbjct: 546 GRGFSFDATTTGVLI 560
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 118/252 (46%), Gaps = 39/252 (15%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMV 207
+V A + N + + G + + S++++ C++++L+ + +L G E+ + G V
Sbjct: 323 QVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFG---EISQKGLKPDTV 379
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC------------------------ 243
Y+ ++ L++ ++ DA I ++M G PDI
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439
Query: 244 -----------YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
YT+V+NG+ + +A +F++L +GL+PDV TYNV I G C++
Sbjct: 440 ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLF 499
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ ME+ G + ITYN ++Q + +++ + +KEM +G + T ++
Sbjct: 500 DEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVL 559
Query: 353 IDGLASKGDIIE 364
I+ L I++
Sbjct: 560 INVLKENPSIVD 571
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DA+ + ++M P ++ ++ + +I + Y LF E+ +LG+ N+
Sbjct: 45 DAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVT 104
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR----LRELVKEMKW 339
N C ++ ++ ++ + G +V+T+NTLL L ++ ++LV+E
Sbjct: 105 NSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKIC 164
Query: 340 K------GIVLN--------------------------LQTYSIMIDGLASKGDIIEACG 367
+ G V+N ++TYSI+ID L ++ A
Sbjct: 165 EPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAIN 224
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL E K + ++ I GLC+ G K LL +M + +++P + L+
Sbjct: 225 LLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILI 280
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 1/222 (0%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
V+ M + G G + ++ S + K+ A+ +L+ M+ DG PDI M +N ++V
Sbjct: 150 VRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVV 209
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
KA E + + +G+ PDVYTYN I GLC V ++MI M + G PD I+
Sbjct: 210 AGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKIS 269
Query: 314 YNTLLQALCKVRELNRLRELVKEMKW-KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y T++ LCK + + +R L++ M+ G+ + TY+++I GLA G EA L E+
Sbjct: 270 YYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRES 329
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
K + + C G + +A E++ +M K P
Sbjct: 330 EGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQP 371
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 3/263 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK-LGFCFGMV 207
RV A+E++ M+ +G D + ++S +C+++ + +E+ G +Q M+ G V
Sbjct: 247 RVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV--EEVRGLLQRMRNDAGLFPDQV 304
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L K +AL L + + + D V Y+ +++ + +A+E+ E+
Sbjct: 305 TYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEM 364
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G PDV TY+ ++G C+ ++ KM+ M + KP+ +T+ LL LCKV +
Sbjct: 365 ISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKT 424
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ EL+ + + + + TYS+++ G +G + E+C ++ + L KG + +
Sbjct: 425 SEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLL 484
Query: 388 ICGLCQRGLVRKALELLKQMADK 410
I LC+ +A + ++Q K
Sbjct: 485 IHALCKDRKPAEAKDFMEQCQSK 507
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 129/270 (47%), Gaps = 3/270 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A+ +L+ M DG D C++ ++ + + D+ L F + M+++G
Sbjct: 174 RAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRV--DKALEFAERMRRVGVEPD 231
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I+ L +V DA+ ++ M +G PD + Y V++ + ++ + L
Sbjct: 232 VYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQ 291
Query: 266 ELLV-LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ GL PD TYNV I+GL K + + ++ + E + D + Y+ ++ + C
Sbjct: 292 RMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLN 351
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ +E+V EM KG ++ TYS ++DG G++ +A +++ +
Sbjct: 352 GRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTH 411
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSP 414
+ GLC+ G +A ELL + ++ +P
Sbjct: 412 TALLNGLCKVGKTSEAWELLNKSEEEWWTP 441
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 151/360 (41%), Gaps = 55/360 (15%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNL---------------FYKIPKF--RINRV 150
+R E + + LIK A R D++ + +Y + F + RV
Sbjct: 224 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV 283
Query: 151 GFAIEILNCMIND-GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+L M ND G D T ++++ + + +DE L F++E + F V Y
Sbjct: 284 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHG--HADEALEFLRESEGKRFRVDEVGY 341
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ ++ S ++ +A I+ +M S G +PD+V Y+ V++G + +A ++ +
Sbjct: 342 SAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYK 401
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY--------------- 314
P+ T+ +NGLCK +++ EE P ITY
Sbjct: 402 NDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKE 461
Query: 315 --------------------NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
N L+ ALCK R+ ++ +++ + KG +N+ ++ +I
Sbjct: 462 SCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIH 521
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G + +GD+ A L+++ + + L ++G +++A L+++M ++ V P
Sbjct: 522 GFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLP 581
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 146/359 (40%), Gaps = 61/359 (16%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P +Y+ V+ L + + ++ +L + + + LI A H D
Sbjct: 262 GCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAK-HGHAD 320
Query: 135 SVNLFYKIP---KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
F + +FR++ VG++ I FC++G+ + E++
Sbjct: 321 EALEFLRESEGKRFRVDEVGYSA------IVHSFCLNGRMAE-------------AKEIV 361
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
G EM G +V Y+ V+ + ++ A ++ M + KP+ V +T +LNG+
Sbjct: 362 G---EMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGL 418
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+A EL ++ P TY+V ++G ++ ++ ++ M + G P
Sbjct: 419 CKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTT 478
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI--------- 362
+ N L+ ALCK R+ ++ +++ + KG +N+ ++ +I G + +GD+
Sbjct: 479 VEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDD 538
Query: 363 --------------------------IEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EA GL+E+ LN+G+ + I C++G
Sbjct: 539 MYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKG 597
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 107/210 (50%), Gaps = 12/210 (5%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ GF +L++ ++C+ R + E F+++ + G +V++T VI ++
Sbjct: 469 MLQKGFFPTTVEINLLIHALCKDRKPA--EAKDFMEQCQSKGCTINVVNFTTVIHGFSRQ 526
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ AL +++ M PD+V YT+V++ + + +A L +++L G++P TY
Sbjct: 527 GDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTY 586
Query: 280 NVYINGLCKQNNVEAGI----KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
I+ C++ N+E + KM+A +E+ S YN +++ LC +LN L+
Sbjct: 587 RTVIHRYCEKGNLEDLLNLLEKMLA-RQEMKS-----AYNQVVEKLCAFGKLNEAYSLLY 640
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
++ V + QT I+++ ++G ++A
Sbjct: 641 KILRTASVRDAQTCHILMESFLNRGLGLQA 670
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 179/379 (47%), Gaps = 28/379 (7%)
Query: 64 LSSLLHSFSIYNCEPPPEAY--HFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID 121
LS+ + SF I PP+ Y + +I + ++ SVL I K + + F
Sbjct: 91 LSNQMDSFGI-----PPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGH-QPDTATFTT 144
Query: 122 LIKTYADAHRFQDSVNLFYKI--PKFRINRVGF---------------AIEILNCMINDG 164
LI+ + D+++LF K+ F+ N V + AI +L M
Sbjct: 145 LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 204
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D + I+ S+C+ R ++ E +M G + YT++I SL +
Sbjct: 205 CQPDVVVYTSIIDSLCKDRQVT--EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKH 262
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+LNQM + I PD+V ++ V++ + + +A ++ D +++ G+ P+V TYN ++
Sbjct: 263 VTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD 322
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G C Q+ ++ +K+ M G P+VI+YNTL+ CK++ +++ L +EM K ++
Sbjct: 323 GHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIP 382
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N TY+ ++ G + +A L E + G + + + LC++ + +A+ LL
Sbjct: 383 NTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 441
Query: 405 KQMADKDVSPGARVWEALL 423
K + ++ P +++ ++
Sbjct: 442 KTIEGSNMDPDIQIYTIVI 460
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 35/252 (13%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI------------------------- 241
VD+ ++ S+ K ++ + NQM S GI PD+
Sbjct: 70 VDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAK 129
Query: 242 ----------VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
+T ++ G+ V+ A LFD+++ G P+V TY INGLCK N
Sbjct: 130 ILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN 189
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
A I+++ ME+ +PDV+ Y +++ +LCK R++ L +M +GI ++ TY+
Sbjct: 190 TNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS 249
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I L + + LL + +N + +F + LC+ G + +A +++ M +
Sbjct: 250 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG 309
Query: 412 VSPGARVWEALL 423
V P + AL+
Sbjct: 310 VEPNVVTYNALM 321
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 156/356 (43%), Gaps = 22/356 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S NC+P Y +I +L ++ Q + ++ + + F + LI +
Sbjct: 196 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVG-QGISPDIFTYTSLIHSL 254
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ ++ L LN MIN D S ++ ++C++ ++
Sbjct: 255 CNLCEWKHVTTL------------------LNQMINSKIMPDVVIFSTVVDALCKEGKIT 296
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E V M G +V Y ++ + ++ +A+ + + M +G P+++ Y
Sbjct: 297 --EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 354
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG + KA LF+E+ L+P+ TYN ++ C ++ I + M G
Sbjct: 355 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHG 413
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD+ TY LL LCK L+ L+K ++ + ++Q Y+I+IDG+ G++ A
Sbjct: 414 QIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 473
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ +KGL + I GLC+RGL+ +A +L +M SP + +
Sbjct: 474 DIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTI 529
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
DAL N+M P V + +L + + Y L +++ G+ PDVYT N+ I
Sbjct: 52 DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
N C N + ++A + +LG +PD T+ TL++ LC ++ L +M +G
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 171
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFDETICGLCQRGLVRKALE 402
N+ TY +I+GL G+ A LL ++ +G C ++ I LC+ V +A
Sbjct: 172 PNVVTYGTLINGLCKVGNTNAAIRLL-RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFN 230
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
L +M + +SP + +L+ S + ++ + + L++Q++N+
Sbjct: 231 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT--TLLNQMINS 273
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 90/168 (53%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+ + EM G + Y ++ L KK + +A+ +L ++ + PDI YT+V+
Sbjct: 401 DAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVI 460
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G+ + A ++F L GL P+V TY + INGLC++ ++ K+ M+ G
Sbjct: 461 DGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCS 520
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
PD TYNT+ Q L + +E R +L++EM +G ++ T +++++ L
Sbjct: 521 PDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 568
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 120/254 (47%), Gaps = 3/254 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++ + M+++G+ + + + +++ C+ + + D+ +EM + V Y N
Sbjct: 333 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM--DKATYLFEEMCQKELIPNTVTY-NT 389
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ ++ DA+ + ++M + G PD+ Y ++L+ + + +A L + +
Sbjct: 390 LMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 449
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ Y + I+G+C+ +EA + + + G +P+V TY ++ LC+ L+ +
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 509
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM G + TY+ + GL + + A LL+E L +G S + LC
Sbjct: 510 LFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569
Query: 393 QRGLVRKALELLKQ 406
L + ++L +
Sbjct: 570 DDKLDQSVKQILSE 583
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 6/303 (1%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+I++ D D + + F + +RV A+E+L+ M + G + T + I+ +C
Sbjct: 417 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 476
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ D S + F K G + Y +I L + + A +L+ M PD
Sbjct: 477 KS-DRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPD 531
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+ +NG+ D +A ++++ +L L LVPD T+N+ I G CK N E +
Sbjct: 532 TYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFE 591
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M +PDV+T+ L+ LCK ++ R+++ M G+ N+ TY+ ++ GL G
Sbjct: 592 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 651
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
I EAC LEE ++ G S + + LC+ AL+L+ ++ P +
Sbjct: 652 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYN 711
Query: 421 ALL 423
L+
Sbjct: 712 ILV 714
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 103/189 (54%), Gaps = 13/189 (6%)
Query: 244 YTMVLNGVIVQEDYVKAEELF-DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +VL + + +A E+F E+ G+ P + TYN INGLCK N + AG+++ +
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E G PDV+TYNTL+ +LCK +L R L +M + V N+ TYS++I+GL G I
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302
Query: 363 IEACGLLEEALNKG------LCTQSSMFDETICGLCQRGLVRKALELLKQMADKD--VSP 414
EA L++E K + T +S D GLC++ + +A EL++ + D VSP
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLD----GLCKQSMTAEACELMRSLRDGSLRVSP 358
Query: 415 GARVWEALL 423
+ L+
Sbjct: 359 DTVTFSTLI 367
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 9/248 (3%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEM--KKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S++++ +C+ + DE +QEM K ++ Y + + L K+ +A +
Sbjct: 288 TYSVLINGLCKVGRI--DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345
Query: 229 LNQMKSDG---IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++ DG + PD V ++ +++G+ +A +FD+++ G VP+V TYN +NG
Sbjct: 346 MRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 404
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LCK + +E MI M + G PDVITY+ L+ A CK ++ EL+ M +G N
Sbjct: 405 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 464
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEE-ALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ T++ +IDGL EA + ++ AL GL + I GL + G +A LL
Sbjct: 465 VVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALL 524
Query: 405 KQMADKDV 412
M D D
Sbjct: 525 DAMPDPDT 532
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 9/248 (3%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEM--KKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S++++ +C+ + DE +QEM K ++ Y + + L K+ + +A +
Sbjct: 782 TYSVLINGLCKVGRI--DEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACEL 839
Query: 229 LNQMKSDG---IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++ DG + PD V ++ +++G+ +A +FD+++ G VP+V TYNV +NG
Sbjct: 840 MRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNG 898
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LCK + +E MI M + G PDVITY+ L+ A CK ++ EL+ M +G N
Sbjct: 899 LCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPN 958
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEE-ALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ T++ +IDGL EA + ++ L GL + I GL + G +A LL
Sbjct: 959 VVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLL 1018
Query: 405 KQMADKDV 412
M D D
Sbjct: 1019 DAMPDPDT 1026
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 140/283 (49%), Gaps = 7/283 (2%)
Query: 146 RINRVGFAIEILNC-MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
R A+EI M DG T + I++ +C+ +L + + +E+ + G
Sbjct: 192 RAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAG--MELFEELVERGHHP 249
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y +I SL K + +A + M S P++V Y++++NG+ +A EL
Sbjct: 250 DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELI 309
Query: 265 DELL--VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE--LGSKPDVITYNTLLQA 320
E+ ++P++ TYN +++GLCKQ+ +++ + + L PD +T++TL+
Sbjct: 310 QEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDG 369
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK +++ + +M G V N+ TY+ +++GL + A ++E ++KG+
Sbjct: 370 LCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPD 429
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + C+ V +ALELL MA + +P + +++
Sbjct: 430 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 472
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 148/344 (43%), Gaps = 24/344 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LLH + C P ++ +I L ++ + + + D + + + + LI
Sbjct: 452 LLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGL 511
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
FR R G A +L+ M + D + ++ + + D+S
Sbjct: 512 ------------------FRTGRAGQAEALLDAMPDP----DTYAFNCCINGLSKLGDVS 549
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
L M +L V + +I K A + +M + ++PD++ +
Sbjct: 550 --RALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ A ++ D + LG+ P+V TYN ++GLCK +E + + M G
Sbjct: 608 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD ITY +L+ ALC+ + +LV E+K G + TY+I++DGL G +A
Sbjct: 668 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+LEE + KG ++ I LC+ G + +A L M+ +
Sbjct: 728 TVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 771
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 44/318 (13%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A + L M++ G D T ++ ++C R +D+ L V E+K G+ V
Sbjct: 651 GRIEEACQFLEEMVSSGCVPDSITYGSLVYALC--RASRTDDALQLVSELKSFGWDPDTV 708
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ L K + A+ +L +M G PD+V Y +++ + D +A L ++
Sbjct: 709 TYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM 768
Query: 268 -----------------LVLGL-----------------------VPDVYTYNVYINGLC 287
L+ GL +P++ TYN +++GLC
Sbjct: 769 SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLC 828
Query: 288 KQNNVEAGIKMIACMEE--LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
KQ+ + +++ + + L PD +T++TL+ LCK + + + +M G V N
Sbjct: 829 KQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ TY+++++GL + A ++E ++KG+ + + C+ V +ALELL
Sbjct: 889 VVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLH 948
Query: 406 QMADKDVSPGARVWEALL 423
MA + +P + +++
Sbjct: 949 GMASRGCTPNVVTFNSII 966
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%)
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L K V AL + N+M + PD V + +++ G ++ +A LF+E++ L
Sbjct: 539 INGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 598
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV T+ I+GLCK VEA ++ M LG P+V+TYN L+ LCK + +
Sbjct: 599 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 658
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++EM G V + TY ++ L +A L+ E + G + ++ + GL
Sbjct: 659 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 718
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G +A+ +L++M K P + L+ S
Sbjct: 719 KSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDS 751
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 10/218 (4%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +++ A ++ M++ G D T S+++ + C+ + DE L + M G
Sbjct: 901 KTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHV--DEALELLHGMASRGCTPN 958
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMK-SDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V + ++I L K ++ +A + + M G+ PD + Y +++G+ +AE L
Sbjct: 959 VVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLL 1018
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
D + PD Y +N INGL K +V + M EL PD +T+N L+ CK
Sbjct: 1019 DAMPD----PDTYAFNCCINGLSKLGDVSRALHR---MLELELVPDKVTFNILIAGACKA 1071
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+ L +EM K + ++ T+ +IDGL G +
Sbjct: 1072 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 1109
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY---------------- 279
G K I + LN ++ KA +LF L P+ +TY
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165
Query: 280 ------------------NVYINGLCKQNNVEAGIKMI-ACMEELGSKPDVITYNTLLQA 320
N+ + LC+ +++ M G P ++TYNT++
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK EL EL +E+ +G ++ TY+ +ID L GD+ EA L + ++
Sbjct: 226 LCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADK--DVSPGARVWEALL 423
+ I GLC+ G + +A EL+++M K DV P + + L
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFL 330
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
K+ D L++M + PD V + +++ G ++ +A LF+E++ L PDV T+
Sbjct: 1038 KLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 1097
Query: 281 VYINGLCKQNNVEA 294
I+GLCK VEA
Sbjct: 1098 ALIDGLCKAGQVEA 1111
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 154/328 (46%), Gaps = 12/328 (3%)
Query: 98 DISSVLDHIEKRENFETPEFIF--IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
D S VL I K +N++ +F +++ D + + +N + +F I A+
Sbjct: 12 DFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVI-----ALS 66
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
++ M+ G+ D T S +++ C+ + + + V +M+++GF +V Y +I
Sbjct: 67 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVF--DAIDLVSKMEEMGFRPDVVIYNTIIDG 124
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K V DA+ + ++M+ DG++ D V Y ++ G+ + A L ++++ +VP+
Sbjct: 125 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 184
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V T+ I+ K+ +K+ M PDV TYN+L+ LC ++ ++++
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 244
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M KG + ++ TY+ +I+G + E L E +GL + ++ I G Q G
Sbjct: 245 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 304
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
A E+ +M D P R + LL
Sbjct: 305 RPDAAQEIFSRM---DSRPNIRTYSILL 329
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 171/405 (42%), Gaps = 52/405 (12%)
Query: 59 KQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI 118
K ++ SL H + +Y+ VI L S+F SV+ + K +E
Sbjct: 24 KNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKF-GYEPDVVT 82
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMI 161
LI + +R D+++L K+ + +I V A+E+ + M
Sbjct: 83 VSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME 142
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
DG D T + +++ +C S L +++M ++ +T VI VK+ K
Sbjct: 143 RDGVRADAVTYNSLVAGLCCSGRWSDAARL--MRDMVMRDIVPNVITFTAVIDVFVKEGK 200
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+A+ + +M + PD+ Y ++NG+ + +A+++ D ++ G +PDV TYN
Sbjct: 201 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 260
Query: 282 YINGLCKQNNVEAGIKMIACMEELG--------------------------------SKP 309
ING CK V+ G K+ M + G S+P
Sbjct: 261 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 320
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
++ TY+ LL LC + + L + M+ I L++ TY+I+I G+ G++ +A L
Sbjct: 321 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 380
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
KGL + I G C++ K+ L ++M + + P
Sbjct: 381 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 111/218 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+VD++ V+ + K + + + + M+ GI D+ Y +V+N + +V A +
Sbjct: 10 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 69
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ G PDV T + ING C+ N V I +++ MEE+G +PDV+ YNT++ CK+
Sbjct: 70 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 129
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N EL M+ G+ + TY+ ++ GL G +A L+ + + + + F
Sbjct: 130 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 189
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G +A++L ++M + V P + +L+
Sbjct: 190 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 227
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P IV ++ VL+ + ++Y LF + V G+ D+Y+YN+ IN LC+ + + +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M + G +PDV+T ++L+ C+ + +LV +M+ G ++ Y+ +IDG
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + +A L + G+ + ++ + GLC G A L++ M +D+ P
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 419 WEALL 423
+ A++
Sbjct: 188 FTAVI 192
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%)
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P + ++ ++ + K N + I + ME G D+ +YN ++ LC+
Sbjct: 7 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+V +M G ++ T S +I+G + +A L+ + G +++ I G C
Sbjct: 67 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLV A+EL +M V A + +L+
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLV 157
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 120/237 (50%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+DE L F++E ++ GF V Y+ ++ S + ++ A I+N+M + G PD+V YT
Sbjct: 328 ADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTA 387
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V+NG+ +A+++ ++ G P+ +Y +NGLC+ N +M+ EE
Sbjct: 388 VVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDW 447
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+ ITY+ ++ L + +L+ ++V+EM KG +++I L + + EA
Sbjct: 448 WTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAK 507
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+EE LN+G + F I G CQ + AL LL M + P A + A++
Sbjct: 508 KFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAII 564
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 156/357 (43%), Gaps = 20/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ C P +Y+ V+ L ++ + ++ ++++ + K +N P+ + + +
Sbjct: 263 LIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVK-DNKLFPDQVTYNTLVHM 321
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
H D A+E L GF VD S I++S C Q +
Sbjct: 322 LSKHGHADE-----------------ALEFLRETEERGFQVDKVGYSAIVNSFCMQGRM- 363
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
D V EM G +V YT V+ L K KV +A +L QM G KP+ V YT
Sbjct: 364 -DRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTA 422
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+LNG+ + ++A E+ + P+ TY+V ++GL ++ + ++ M G
Sbjct: 423 LLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKG 482
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P + N L+++LC +++N ++ ++E +G +N ++ +I G +I A
Sbjct: 483 FFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTAL 542
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL++ + F I L ++G + +A +M K + P + A++
Sbjct: 543 SLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVI 599
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 122/245 (49%), Gaps = 7/245 (2%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +V+ S + K+ +A+ +L M+ G++P+++ ++ +++ KA + +
Sbjct: 174 FAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQ 233
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
++G+ P+V TYN I G C VE +++IA M G PD ++Y T++ LC+ + +
Sbjct: 234 LVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIK 293
Query: 329 RLRELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+R L+++M K + + TY+ ++ L+ G EA L E +G +
Sbjct: 294 EVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAI 353
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
+ C +G + +A E++ +M K SP + A++ L V K++ +++ Q+
Sbjct: 354 VNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAK----KMLQQMY 409
Query: 446 NTPCK 450
CK
Sbjct: 410 KHGCK 414
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M+K G ++ I LV K+ AL L +M+ GI P++V Y ++ G
Sbjct: 197 MQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQ 256
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-EELGSKPDVITYN 315
A EL E+ G PD +Y + LC+ ++ ++ M ++ PD +TYN
Sbjct: 257 VEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYN 316
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ L K + E ++E + +G ++ YS +++ +G + A ++ E + K
Sbjct: 317 TLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITK 376
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + + GLC+ G V +A ++L+QM P + ALL
Sbjct: 377 GCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALL 424
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 112/287 (39%), Gaps = 54/287 (18%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+L + C+P +Y ++ L ++ + +++ E E++ TP I ++
Sbjct: 404 MLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSE--EDWWTPNAITYSVV--- 458
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
H + R ++ A +++ M+ GF +L++ S+C ++ +
Sbjct: 459 --MHGLR------------REGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKM- 503
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+E F++E G V++T VI + + + AL +L+ M + PD V +T
Sbjct: 504 -NEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTA 562
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY--------------------------- 279
+++ + + +A ++L GL P TY
Sbjct: 563 IIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS 622
Query: 280 ------NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
N I LC N EA K++ + S+ D T + L+++
Sbjct: 623 KCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMES 669
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +EM++ +V ++ SL K K+ +A + + M G PD+ YT++L
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG + V +LFD +L G+ PD+YT+NV I ++ + + M + G K
Sbjct: 369 NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P V+TY T++ ALC++ +++ E +M +G+V + Y +I G + G +++A L
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E +N G+ F I LC+ G V A + + + P A V+ L+
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 159/340 (46%), Gaps = 25/340 (7%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVN-LFYKIPKFRINRVGFAIEILNCMINDGFCV 167
R I L+K + +A R ++++ L ++ P+ L C + D F
Sbjct: 141 RTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPE------------LGC-VPDVF-- 185
Query: 168 DGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDA 225
+ +++L S+C Q + +D+LL + E + C +V Y VI K+ V A
Sbjct: 186 ---SYNILLKSLCNQGKSGQADDLLRMMAEGGTV--CSPDVVAYNTVIDGFFKEGDVNKA 240
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ +M GI PD+V Y+ V++ + KAE +++ G++PD +TYN I G
Sbjct: 241 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYG 300
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+ +++ M PDV+ NTL+ +LCK ++ R++ M KG +
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ +Y+IM++G A+KG +++ L + L G+ F+ I G++ KA+ +
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 420
Query: 406 QMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+M D V P + ++ L + K+D F +++DQ
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI ++ A+E N MI+ G D ++ C L + L + E+ G
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL--ISEIMNNGMRLD 500
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++I +L K +V DA I + + G+ PD V Y M+++G + KA +FD
Sbjct: 501 IVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFD 560
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+V Y +NG CK ++ G+ + M + G KP I YN ++ L +
Sbjct: 561 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ EM GI +N TYSI++ GL EA L +E + +
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G+ Q V +A +L ++ + P A + ++
Sbjct: 681 TMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 2/259 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++ + M+ DG D T ++++ + L D+ + EM+ G +V Y VI
Sbjct: 382 DLFDLMLGDGIAPDIYTFNVLIKAYANCGML--DKAMIIFNEMRDHGVKPHVVTYMTVIA 439
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L + K+ DA+ NQM G+ PD Y ++ G +KA+EL E++ G+
Sbjct: 440 ALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRL 499
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D+ + IN LCK V + +G PD + YN L+ C V ++ + +
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M GI N+ Y +++G G I E L E L KG+ + +++ I GL +
Sbjct: 560 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 619
Query: 395 GLVRKALELLKQMADKDVS 413
G A +M + ++
Sbjct: 620 GRTVPAKVKFHEMTESGIA 638
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 2/258 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM + G +V Y++V+ +L K + A L QM + G+ PD Y ++ G
Sbjct: 245 KEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 304
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +F E+ ++PDV N + LCK ++ + M G PDV +Y
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+L L + +L M GI ++ T++++I A+ G + +A + E +
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 424
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
G+ + I LC+ G + A+E QM D+ V P + L+ + +
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK 484
Query: 435 TSFIRLVDQILNTPCKME 452
L+ +I+N +++
Sbjct: 485 AK--ELISEIMNNGMRLD 500
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 137/336 (40%), Gaps = 21/336 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AYH +I+ + ++ I F +I R D+ N
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISEI-MNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+F +N ++ M+ DG+C+ GK ++ L M
Sbjct: 523 IF----DLTVNVGLHPDAVVYNMLMDGYCLVGKM----------------EKALRVFDAM 562
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
G +V Y ++ K ++ + L + +M GIKP + Y ++++G+
Sbjct: 563 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 622
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
V A+ F E+ G+ + TY++ + GL K + I + + + K D+IT NT+
Sbjct: 623 VPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 682
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ + + R + ++L + G+V TYSIMI L +G + EA + N G
Sbjct: 683 IAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGC 742
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
S + + + L ++ + +A L ++ +++ S
Sbjct: 743 EPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 778
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G Y+ V+R L K +A+ + ++++ +K DI+ ++ G+
Sbjct: 630 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 689
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A++LF + GLVP TY++ I L K+ VE M + M+ G +PD
Sbjct: 690 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLL 749
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
N +++ L K E+ R + ++ + L T +++D +SKG
Sbjct: 750 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 795
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 147/349 (42%), Gaps = 21/349 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
L H S P Y+ +I L EN + + V+ ++ R T + ++IK
Sbjct: 546 GLFHRMSRDGVFPNTVTYNALINILVENRRI-KYAFVVLNLMGRNGLFTNIVTYNEMIKG 604
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
Y PK A+ ++N M+ G + T + I+ C+ +
Sbjct: 605 YC-----------ILGDPKK-------AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 646
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+S L + M+ G YT +I K K+ A G+ N+M DG+ P+ V YT
Sbjct: 647 TS--ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYT 704
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++G E A L + + G P+V TYNV I+GL KQNN ++ M E
Sbjct: 705 ALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE 764
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P+V+TY ++ LCK + E+ +M +G + NL TYS +I L +G + EA
Sbjct: 765 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 824
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L E GL + + I G V A L +M P
Sbjct: 825 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 873
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 116/233 (49%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ F+ + + G G+ Y+ ++ L + + ++M S+G++P+++ Y V+N
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 394
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + AE + ++ + PD +TY I G C+++++++ +++ M + G +P+
Sbjct: 395 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 454
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+TY+TL+ LC +N +L++EM GI+ T + I L G +A L
Sbjct: 455 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 514
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ NKG + I GLC GL++ A+ L +M+ V P + AL+
Sbjct: 515 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 567
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+G M + G V Y +I LV+ ++ A +LN M +G+ +IV Y ++ G
Sbjct: 545 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKG 604
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ D KA + + +L G ++ TYN I G C N + ++++ M + G KPD
Sbjct: 605 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPD 664
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+Y L+ CK+ ++ L EM G+ N TY+ +IDG + A LLE
Sbjct: 665 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 724
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G ++ I GL ++ A EL K M ++ + P + A++
Sbjct: 725 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 777
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 142/341 (41%), Gaps = 21/341 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y+ VI L ++ D +++ + + E F + +I + H
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESE-MSPDTFTYTSMILGHCRKHDLDS-------- 438
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
A+++ N M +G + T S +++ +C+ + +E ++EM G
Sbjct: 439 ----------ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV--NEAFDLIREMILHGI 486
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
T I +L DA + MK+ G +P++ YT +++G+ V A
Sbjct: 487 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 546
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
LF + G+ P+ TYN IN L + ++ ++ M G +++TYN +++ C
Sbjct: 547 LFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYC 606
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ + + ++ M +G NL TY+ +I G G+ A +L+ + G
Sbjct: 607 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 666
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E ICG C+ + A L +M D + P + AL+
Sbjct: 667 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 707
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 32/326 (9%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I+++ A + N M++DG C + T + ++ C+ L D ++ MK+ G
Sbjct: 677 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL--DTATSLLEHMKRSGCRPN 734
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I L K+ A + M +GI P++V YT +++G+ A E+F+
Sbjct: 735 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 794
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ G +P++ TY+ I L ++ VE + A +E G PD ITY +++A
Sbjct: 795 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 854
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG-----------LASKGDIIEACGLLEEA-- 372
++ + M G L TY ++I G LA+ D++ C +
Sbjct: 855 KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 914
Query: 373 -------------LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
L+ GL Q + + L G +A ELL M + + P +
Sbjct: 915 QDAVSVMSAKLAELDPGLSVQVQ--NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAY 972
Query: 420 EALLLS--SVSKLDFVNTSFIRLVDQ 443
+LL S V +D F + Q
Sbjct: 973 NSLLCSLLRVRNVDLAMGVFKHMSTQ 998
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 133/351 (37%), Gaps = 77/351 (21%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+SLL C P + Y+ +I L K+ NF E +L K
Sbjct: 720 TSLLEHMKRSGCRPNVQTYNVLIHGLT----------------KQNNFSGAE----ELCK 759
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ F + V I DG C +G T SL L
Sbjct: 760 VMIEEGIFPNVVTYTAMI--------------------DGLCKNGST-SLALE------- 791
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+M + G ++ Y+++IR+L ++ KV +A + +++ G+ PD + Y
Sbjct: 792 --------MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ I+ A ++ G P ++TY V I GL + + +
Sbjct: 844 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE--------YLLADQR 895
Query: 305 LGSKPDVI-----TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
L + PDV+ Y T Q V +L EL L++Q + ++ L++
Sbjct: 896 LAALPDVVPNCSFGYQTTDQDAVSVMSA-KLAELDPG-------LSVQVQNALVSNLSTA 947
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
G EA LL +++GLC ++ +C L + V A+ + K M+ +
Sbjct: 948 GRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 998
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%)
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+E + D L GL ++ Y+ + L + A + M G +P+++
Sbjct: 328 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 387
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN ++ ALCK + ++K++ + + TY+ MI G K D+ A + +
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 447
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+G + + I GLC G V +A +L+++M + P A
Sbjct: 448 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ +A EL ++ GL PD YN + L + NV+ + + M G + + Y
Sbjct: 950 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 1009
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
L+ ALC++ R + M + + +++IDGL G
Sbjct: 1010 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 1053
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 146/286 (51%), Gaps = 5/286 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCF 204
+++RV A+++ + + C D KT ++++ +C + + ELLG M G
Sbjct: 183 KLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV---MSGFGCEP 239
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI-KPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y +I+ K ++ A + +KS + PD+V YT +++G +A L
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
D++L LG+ P T+NV ++G K + ++ M G PDV+T+ +L+ C+
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
V ++++ L +EM +G+ N TYSI+I+ L ++ +++A LL + +K + Q M
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++ I G C+ G V +A ++++M K P + L++ K
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 20/321 (6%)
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFR-----------------INRVGFAIEILNCMIND 163
L+ T R +D++ LF + +F+ + + A+E+L M
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKV 222
G D T + ++ C+ +L+ + +++K C +V YT++I K K+
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEM--FKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+A +L+ M GI P V + ++++G + + AEE+ +++ G PDV T+
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+G C+ V G ++ M G P+ TY+ L+ ALC L + REL+ ++ K I
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ Y+ +IDG G + EA ++EE K F I G C +G + +A+
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 403 LLKQMADKDVSPGARVWEALL 423
+ +M SP +LL
Sbjct: 474 IFHKMVAIGCSPDKITVSSLL 494
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 7/273 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ CM +DG + + ++SS E+ L L +Q + G C MV ++
Sbjct: 122 AGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL-LLQSFEVEGCC--MV-VNSL 177
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +LVK ++V DA+ + ++ D + +++ G+ KA EL + G
Sbjct: 178 LNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS--KPDVITYNTLLQALCKVRELNRL 330
PD+ TYN I G CK N + +M ++ GS PDV+TY +++ CK ++
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+ +M GI T+++++DG A G+++ A + + ++ G F I G
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G V + L ++M + + P A + L+
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 9/249 (3%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + ++S C+ + E + +M +LG V + ++ K ++ A
Sbjct: 276 DVVTYTSMISGYCKAGKMR--EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
I +M S G PD+V +T +++G + L++E+ G+ P+ +TY++ IN LC
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 288 KQNNVEAGIKMIACMEELGSK---PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
+N + +K + +L SK P YN ++ CK ++N +V+EM+ K
Sbjct: 394 NENRL---LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ T++I+I G KG + EA + + + G + L + G+ ++A L
Sbjct: 451 DKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-L 509
Query: 405 KQMADKDVS 413
Q+A K S
Sbjct: 510 NQIARKGQS 518
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
L + +TYN+ LCK + +M CM+ G P+ L+ + + +L+
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 330 LRE-LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L++ + +G + + + +++ L + +A L +E L C + F+ I
Sbjct: 157 ATALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC G KALELL M+ P + L+
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 1/222 (0%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
V+ M + G G + ++ S + K+ A+ +L+ M+ DG PDI M +N ++V
Sbjct: 150 VRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVV 209
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
KA E + + +G+ PDVYTYN I GLC V ++MI M + G PD I+
Sbjct: 210 AGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKIS 269
Query: 314 YNTLLQALCKVRELNRLRELVKEMKW-KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y T++ LCK + + +R L++ M+ G+ + TY+++I GLA G EA L E+
Sbjct: 270 YYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRES 329
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
K + + C G + +A E++ +M K P
Sbjct: 330 EGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQP 371
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 3/263 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK-LGFCFGMV 207
RV A+E++ M+ +G D + ++S +C+++ + +E+ G +Q M+ G V
Sbjct: 247 RVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV--EEVRGLLQRMRNDAGLFPDQV 304
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I L K +AL L + + + D V Y+ +++ + +A+E+ E+
Sbjct: 305 TYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEM 364
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G PDV TY+ ++G C+ ++ KM+ M + KP+ +T+ LL LCKV +
Sbjct: 365 ISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKT 424
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ EL+ + + + + TYS+++ G +G + E+C ++ + L KG + +
Sbjct: 425 SEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLL 484
Query: 388 ICGLCQRGLVRKALELLKQMADK 410
I LC+ +A + ++Q K
Sbjct: 485 IHALCKDRKPAEAKDFMEQCQSK 507
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 129/270 (47%), Gaps = 3/270 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A+ +L+ M DG D C++ ++ + + D+ L F + M+++G
Sbjct: 174 RAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRV--DKALEFAERMRRVGVEPD 231
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I+ L +V DA+ ++ M +G PD + Y V++ + ++ + L
Sbjct: 232 VYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQ 291
Query: 266 ELLV-LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ GL PD TYNV I+GL K + + ++ + E + D + Y+ ++ + C
Sbjct: 292 RMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLN 351
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ +E+V EM KG ++ TYS ++DG G++ +A +++ +
Sbjct: 352 GRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTH 411
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSP 414
+ GLC+ G +A ELL + ++ +P
Sbjct: 412 TALLNGLCKVGKTSEAWELLNKSEEEWWTP 441
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 151/360 (41%), Gaps = 55/360 (15%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNL---------------FYKIPKF--RINRV 150
+R E + + LIK A R D++ + +Y + F + RV
Sbjct: 224 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV 283
Query: 151 GFAIEILNCMIND-GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+L M ND G D T ++++ + + +DE L F++E + F V Y
Sbjct: 284 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHG--HADEALEFLRESEGKRFRVDEVGY 341
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ ++ S ++ +A I+ +M S G +PD+V Y+ V++G + +A ++ +
Sbjct: 342 SAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYK 401
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY--------------- 314
P+ T+ +NGLCK +++ EE P ITY
Sbjct: 402 NDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKE 461
Query: 315 --------------------NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
N L+ ALCK R+ ++ +++ + KG +N+ ++ +I
Sbjct: 462 SCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIH 521
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G + +GD+ A L+++ + + L ++G +++A L+++M ++ V P
Sbjct: 522 GFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLP 581
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 146/359 (40%), Gaps = 61/359 (16%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C P +Y+ V+ L + + ++ +L + + + LI A H D
Sbjct: 262 GCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAK-HGHAD 320
Query: 135 SVNLFYKIP---KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
F + +FR++ VG++ I FC++G+ + E++
Sbjct: 321 EALEFLRESEGKRFRVDEVGYSA------IVHSFCLNGRMAE-------------AKEIV 361
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
G EM G +V Y+ V+ + ++ A ++ M + KP+ V +T +LNG+
Sbjct: 362 G---EMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGL 418
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+A EL ++ P TY+V ++G ++ ++ ++ M + G P
Sbjct: 419 CKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTT 478
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI--------- 362
+ N L+ ALCK R+ ++ +++ + KG +N+ ++ +I G + +GD+
Sbjct: 479 VEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDD 538
Query: 363 --------------------------IEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EA GL+E+ LN+G+ + I C++G
Sbjct: 539 MYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKG 597
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 107/210 (50%), Gaps = 12/210 (5%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ GF +L++ ++C+ R + E F+++ + G +V++T VI ++
Sbjct: 469 MLQKGFFPTTVEINLLIHALCKDRKPA--EAKDFMEQCQSKGCTINVVNFTTVIHGFSRQ 526
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ AL +++ M PD+V YT+V++ + + +A L +++L G++P TY
Sbjct: 527 GDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTY 586
Query: 280 NVYINGLCKQNNVEAGI----KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
I+ C++ N+E + KM+A +E+ S YN +++ LC +LN L+
Sbjct: 587 RTVIHRYCEKGNLEDLLNLLEKMLA-RQEMKS-----AYNQVVEKLCAFGKLNEAYSLLY 640
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
++ V + QT I+++ ++G ++A
Sbjct: 641 KILRTASVRDAQTCHILMESFLNRGLGLQA 670
>gi|125569816|gb|EAZ11331.1| hypothetical protein OsJ_01195 [Oryza sativa Japonica Group]
Length = 943
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 136/258 (52%), Gaps = 4/258 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL--GFCFGMVDYT 210
A+++ + M G VD + CS+I+S + + + L F + +++ GF G++ T
Sbjct: 4 ALKVFDVMAAAGCQVDDRVCSVIISGF--SKVGKAGDGLEFYRRVRREFNGFEPGLITLT 61
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+ L + + +A ++ +M+ G+ D V Y +++G + +K +L
Sbjct: 62 AFVDVLGRVGRTTEAAQLVREMEGKGLVGDAVLYGSLVHGYMSSGLLMKGLREHRVMLDK 121
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ DV +Y I+GLC++ +VE + + M +KP++ITY +L+ CK L+
Sbjct: 122 GIAADVVSYTTVIDGLCRERSVEKVMGFLDEMNRRDAKPNLITYTSLIGGFCKRNRLDDA 181
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+V++++ G+V++ YSI+ID L KG + A LLEE KG+ ++ I G
Sbjct: 182 FSIVRKLEQTGVVVDEYVYSILIDNLCKKGYLDRAFSLLEEMDKKGIKIGIVTYNSVING 241
Query: 391 LCQRGLVRKALELLKQMA 408
LC+ G +KA+E+ + +A
Sbjct: 242 LCKVGHTKKAVEIYEGIA 259
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F++E ++ G+ + Y+ ++ L K + AL + MK +GI+P+IV + VLNG+
Sbjct: 561 FLKEAEQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLC 620
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
Q +A LFD L ++P + TY++ I LC++ ++ ++ M G KP
Sbjct: 621 QQGCLTEAFRLFDYLESSEVLPTLVTYSILIAALCREGFLDDAHELFQKMSTKGIKPTTR 680
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
YN L+ C + EL+ + + + T +I+G KGDI A G E
Sbjct: 681 VYNLLISGYCNYGLTEKALELISHFEEIFLFPDAITIGAIINGHCLKGDIESALGFFSEY 740
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+K + F + GL +G + ++ +L++M
Sbjct: 741 YHKEMVPDFVGFMSLVKGLYAKGRMEESRSILREM 775
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 136/294 (46%), Gaps = 32/294 (10%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D + + ++ +C +R S ++++GF+ EM + ++ YT++I K+
Sbjct: 118 MLDKGIAADVVSYTTVIDGLCRER--SVEKVMGFLDEMNRRDAKPNLITYTSLIGGFCKR 175
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
++ DA I+ +++ G+ D Y+++++ + + +A L +E+ G+ + TY
Sbjct: 176 NRLDDAFSIVRKLEQTGVVVDEYVYSILIDNLCKKGYLDRAFSLLEEMDKKGIKIGIVTY 235
Query: 280 NVYINGLCKQNNVEAGIKM---IAC---------------------------MEELGSKP 309
N INGLCK + + +++ IA +E G
Sbjct: 236 NSVINGLCKVGHTKKAVEIYEGIAADNFTYSTLLHGHIKVEDATGVMAIKGRLESSGVTI 295
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DV+T N L++AL +++++ L M + N+ TY +ID + G+ A L
Sbjct: 296 DVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIVTYHTVIDMMCKLGETDRALQLF 355
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ L + + + + I LC G V A ++ + +++ P + ++ L+
Sbjct: 356 DDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQIFNDLIQRNLRPDSCTYKKLI 409
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 8/216 (3%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIV---CYTMVLNGVIVQEDYVKAEELFDEL 267
N++ + K V +A+G N M + + ++ YT+ G I+ A E
Sbjct: 511 NMLSCHLSKNSVGEAIGFSNYMNNGRVPVSVLREAVYTLKREGRILD-----ACNFLKEA 565
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G D+ Y++ + GLCK +E + + M+E G +P+++ +N++L LC+ L
Sbjct: 566 EQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLCQQGCL 625
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
L ++ ++ L TYSI+I L +G + +A L ++ KG+ + +++
Sbjct: 626 TEAFRLFDYLESSEVLPTLVTYSILIAALCREGFLDDAHELFQKMSTKGIKPTTRVYNLL 685
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C GL KALEL+ + + P A A++
Sbjct: 686 ISGYCNYGLTEKALELISHFEEIFLFPDAITIGAII 721
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 98/203 (48%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+ +L ++ ++ DA L + + +G D+ Y++++ G+ KA +L + + G
Sbjct: 545 AVYTLKREGRILDACNFLKEAEQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEG 604
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P++ +N +NGLC+Q + ++ +E P ++TY+ L+ ALC+ L+
Sbjct: 605 IQPNIVIHNSVLNGLCQQGCLTEAFRLFDYLESSEVLPTLVTYSILIAALCREGFLDDAH 664
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL ++M KGI + Y+++I G + G +A L+ L + I G
Sbjct: 665 ELFQKMSTKGIKPTTRVYNLLISGYCNYGLTEKALELISHFEEIFLFPDAITIGAIINGH 724
Query: 392 CQRGLVRKALELLKQMADKDVSP 414
C +G + AL + K++ P
Sbjct: 725 CLKGDIESALGFFSEYYHKEMVP 747
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 131/308 (42%), Gaps = 28/308 (9%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFY 140
+Y VI L + LD + +R+ P I + LI + +R D+ ++
Sbjct: 129 SYTTVIDGLCRERSVEKVMGFLDEMNRRD--AKPNLITYTSLIGGFCKRNRLDDAFSIVR 186
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
K+ + G VD S+++ ++C++ L D ++EM K
Sbjct: 187 KLEQ------------------TGVVVDEYVYSILIDNLCKKGYL--DRAFSLLEEMDKK 226
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G G+V Y +VI L K A+ I +GI D Y+ +L+G I ED
Sbjct: 227 GIKIGIVTYNSVINGLCKVGHTKKAVEIY-----EGIAADNFTYSTLLHGHIKVEDATGV 281
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ L G+ DV T NV I L V+ + M E+ +P+++TY+T++
Sbjct: 282 MAIKGRLESSGVTIDVVTCNVLIKALFMIKKVDDACSLFLRMPEMRLRPNIVTYHTVIDM 341
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
+CK+ E +R +L + K + + ++ +I L + G + A + + + + L
Sbjct: 342 MCKLGETDRALQLFDDYKEDILFSSTIVHNCLIIALCNGGKVNMAEQIFNDLIQRNLRPD 401
Query: 381 SSMFDETI 388
S + + I
Sbjct: 402 SCTYKKLI 409
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 99/214 (46%), Gaps = 2/214 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSD--GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I K K D L +++ + G +P ++ T ++ + +A +L E+
Sbjct: 26 IISGFSKVGKAGDGLEFYRRVRREFNGFEPGLITLTAFVDVLGRVGRTTEAAQLVREMEG 85
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
GLV D Y ++G + G++ M + G DV++Y T++ LC+ R + +
Sbjct: 86 KGLVGDAVLYGSLVHGYMSSGLLMKGLREHRVMLDKGIAADVVSYTTVIDGLCRERSVEK 145
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ + EM + NL TY+ +I G + + +A ++ + G+ ++ I
Sbjct: 146 VMGFLDEMNRRDAKPNLITYTSLIGGFCKRNRLDDAFSIVRKLEQTGVVVDEYVYSILID 205
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC++G + +A LL++M K + G + +++
Sbjct: 206 NLCKKGYLDRAFSLLEEMDKKGIKIGIVTYNSVI 239
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+KE + G ++L YSI+++GL G + +A L E +G+ + + + GLC
Sbjct: 561 FLKEAEQNGYSVDLAMYSILVEGLCKSGYLEKALDLCESMKEEGIQPNIVIHNSVLNGLC 620
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
Q+G + +A L + +V P V ++L++++ + F++ +
Sbjct: 621 QQGCLTEAFRLFDYLESSEVLP-TLVTYSILIAALCREGFLDDA 663
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 117/235 (49%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +EM++ +V + ++ SL K K+ +A + + M G PD+ Y ++L
Sbjct: 310 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 369
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG + V +LFD +L G+ PD YT+NV I ++ + + M + G K
Sbjct: 370 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 429
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV+TY T++ ALC++ +++ E +M +G+ + Y+ +I G + G +++A L
Sbjct: 430 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 489
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E +N G+ F I LC+ G V A + + + P A V+ L+
Sbjct: 490 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 544
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 134/275 (48%), Gaps = 6/275 (2%)
Query: 173 SLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILN 230
S++L S+C+Q + +D+LL + E + C +V Y VI K+ V A +
Sbjct: 189 SILLKSLCDQGKSGQADDLLRMMAEGGAV--CSPNVVAYNTVIDGFFKEGDVNKACDLFK 246
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M GI PD+V Y V++ + KAE +++ ++P+ +TYN I G
Sbjct: 247 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 306
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ +++ M PDV+T + L+ +LCK ++ R++ M KG ++ +Y+
Sbjct: 307 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 366
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
IM++G A+KG +++ L + L G+ F+ I G++ KA+ + +M D
Sbjct: 367 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 426
Query: 411 DVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
V P + ++ L + K+D F +++DQ
Sbjct: 427 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 461
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 171/419 (40%), Gaps = 56/419 (13%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P +Y+ ++ A D++ + D + + + F LIK YA+ ++
Sbjct: 360 PDVFSYNIMLNGYATKGCLVDMTDLFD-LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 418
Query: 138 LFYKIPKF-----------------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
+F ++ RI ++ A+E N MI+ G D + ++ C
Sbjct: 419 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 478
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
L + L + E+ G +V ++++I +L K +V DA I + + G+ PD
Sbjct: 479 THGSLLKAKEL--ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 536
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
V Y M+++G + KA +FD ++ G+ P+V Y +NG CK ++ G+ +
Sbjct: 537 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 596
Query: 301 CMEELGSKP-----------------------------------DVITYNTLLQALCKVR 325
M + G KP D+ TYN +L+ L K R
Sbjct: 597 EMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNR 656
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L KE++ + +N+ T + MIDG+ + EA L L +
Sbjct: 657 CFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYS 716
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT-SFIRLVDQ 443
I L + GLV +A ++ M + P +R+ ++ + K + V +++ +D+
Sbjct: 717 IMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 775
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 124/268 (46%), Gaps = 2/268 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ RV A I + +N G D ++++ C + ++ L M G
Sbjct: 514 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM--EKALRVFDAMVSAGIEPN 571
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++ K ++ + L + +M GIKP + Y+++++G+ V A+ F
Sbjct: 572 VVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFH 631
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G+ D+ TYN+ + GL K + I + + + K ++IT NT++ + + R
Sbjct: 632 EMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTR 691
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ ++L + +V ++ TYSIMI L +G + EA + N G S + +
Sbjct: 692 RVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLN 751
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVS 413
+ L ++ + +A L ++ +++ S
Sbjct: 752 HVVRELLKKNEIVRAGAYLSKIDERNFS 779
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM + G +V Y +V+ +L K + A L QM + + P+ Y ++ G
Sbjct: 246 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 305
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +F E+ ++PDV T ++ + LCK ++ + M G PDV +Y
Sbjct: 306 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 365
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N +L L + +L M GI + T++++I A+ G + +A + E +
Sbjct: 366 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 425
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + I LC+ G + A+E QM D+ V+P + L+
Sbjct: 426 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 474
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G + Y V+R L K +A+ + ++++ +K +I+ +++G+
Sbjct: 631 HEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQT 690
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A++LF + LVP V TY++ I L K+ VE M + M+ G +P+
Sbjct: 691 RRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLL 750
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
N +++ L K E+ R + ++ + L T +++D +SKG
Sbjct: 751 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 796
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 168/358 (46%), Gaps = 30/358 (8%)
Query: 65 SSLLHSFSIYNCEPPP-----EAYHFVIKTLAENSQFCDISSVLDHIEKREN--FETPEF 117
+L + F ++ + P E Y +IK L + QF + ++++ + +REN F +P +
Sbjct: 102 GNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEM-RRENPQFVSP-Y 159
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+F+ L++ +A A + ++ + ++PK+ + C++ D C +G
Sbjct: 160 VFVVLMRRFASARMVKKAIEVLDEMPKYGCEP---DEHVFGCLL-DALCKNG-------- 207
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
SV E L D + F +K +T+++ ++ K+ +A +L Q++ G
Sbjct: 208 SVKEAASLFEDMRIRFTPTLK---------HFTSLLYGWCREGKLMEAKYVLVQIREAGF 258
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+PDIV Y +L G V A +L E+ P+V ++ I LC + +E ++
Sbjct: 259 EPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMR 318
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M+ G D +TY TL+ CK ++++ EL+ M +G + N TY ++
Sbjct: 319 VFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHE 378
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
K ++ E L+EE G ++++ I C+ G +++ + + +M +SPG
Sbjct: 379 KKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPG 436
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 156/398 (39%), Gaps = 73/398 (18%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y CEP + ++ L +N + +S+ + + R F F L+ + +
Sbjct: 187 YGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIR--FTPTLKHFTSLLYGWCREGKLM 244
Query: 134 DSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGK--------------------- 170
++ K +I GF +I+ N ++ G+ GK
Sbjct: 245 EA-----KYVLVQIREAGFEPDIVVYNNLLT-GYAAAGKMVDAYDLLKEMRRKECEPNVM 298
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+ + ++ ++C ++ + +E + EM+ G V YT +I K K+ +L+
Sbjct: 299 SFTTLIQALCAKKKM--EEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLD 356
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M G P+ + Y ++ +E+ + EL +E+ +G PD+ YN+ I CK
Sbjct: 357 NMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLG 416
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV------- 343
++ G+++ ME G P + T+ ++ R L E KEM +G++
Sbjct: 417 EIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGT 476
Query: 344 ------------------------------LNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
LN+ ++I I L S G + EAC + +
Sbjct: 477 LKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMM 536
Query: 374 NKGLCTQSSMFDETICGLCQ---RGLVRKALELLKQMA 408
+ G+ Q F + + GL + R + + E +++MA
Sbjct: 537 DAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKVRKMA 574
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 111/217 (51%), Gaps = 8/217 (3%)
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
F D T + + C +D S L +++M + G Y +++ + ++
Sbjct: 206 FPPDAVTYNTLADGWCRVKDTS--RALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQH 263
Query: 225 ALGILNQMKSDG-----IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
A QMK G KPD+V YT VL+G+ V KA ++FDE+ G P + TY
Sbjct: 264 AWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATY 323
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N I CK+ NVE + + M G P+V+TY L++ LC +++R +L+ +MK
Sbjct: 324 NALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKR 383
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+G N+QTY+++I L +GDI +A L E ++KG
Sbjct: 384 EGCEPNVQTYNVLIGYLFEEGDIEKALHLF-ETMSKG 419
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 121/273 (44%), Gaps = 6/273 (2%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
IL G +T ++ + F+ + G + + +++ +
Sbjct: 126 ILALFPRHGLAFTPRTFPIMFERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDA 185
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
LVK A ++ ++ PD V Y + +G +D +A ++ +++ G+ P
Sbjct: 186 LVKSRHAGKAASLVRALERR-FPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPT 244
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGS-----KPDVITYNTLLQALCKVRELNRL 330
TYN+ + G + ++ M++ GS KPDV++Y T+L L +L++
Sbjct: 245 KTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKA 304
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
R++ EM +G ++ TY+ +I KG++ +A + ++ + KG + I G
Sbjct: 305 RKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRG 364
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC G + +A++LL +M + P + + L+
Sbjct: 365 LCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLI 397
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 5/207 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y + + + AL IL QM GI P Y ++L G A + F +
Sbjct: 211 VTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQ 270
Query: 267 LLVLG-----LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ G PDV +Y ++GL ++ K+ M G P + TYN L+Q
Sbjct: 271 MKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVT 330
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK + + +M KG + N+ TY+++I GL G I A LL++ +G
Sbjct: 331 CKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNV 390
Query: 382 SMFDETICGLCQRGLVRKALELLKQMA 408
++ I L + G + KAL L + M+
Sbjct: 391 QTYNVLIGYLFEEGDIEKALHLFETMS 417
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 169/382 (44%), Gaps = 17/382 (4%)
Query: 59 KQPHILSSLLHSFSIYNCEPPP----EAYHFVIKTLAENSQFCDISSVLDHIEKRENFET 114
++ H+LS L F+ E P E + ++ L +N +F +L + + +
Sbjct: 70 QKDHVLS--LEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDL 127
Query: 115 PEFIFIDLIKTY----ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK 170
P+ +F ++ +Y + F + KFR A + M GF +
Sbjct: 128 PDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRN-----ATDTFLQMKGYGFLPTVE 182
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+C+ LSS+ + + D L F +EM++ + V+R+ K K+ A+ +
Sbjct: 183 SCNAYLSSLLDLHRV--DIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFE 240
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M+S GI P+ Y ++ G + A +L + + G+ +V T+N I+G CK+
Sbjct: 241 EMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEG 300
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ K+ + M+ L P+ ITYNTL+ ++ R L +EM G+ ++ TY+
Sbjct: 301 KLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYN 360
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I GL +G +A +++E + L +S F I G C R +A +L K M
Sbjct: 361 ALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRI 420
Query: 411 DVSPGARVWEALLLSSVSKLDF 432
P + + L+ + DF
Sbjct: 421 GCHPNEQTFNMLVSAFCKNEDF 442
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 159/356 (44%), Gaps = 23/356 (6%)
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
+ ++L+S+ + C+ P + + KTLA +F + + ++ T E L
Sbjct: 131 LFEAILYSYRM--CDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYL 188
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
+ D HR D FYK + R R+ + N M+ FC GK
Sbjct: 189 -SSLLDLHRV-DIALAFYK--EMRRCRISPNVYTRN-MVMRAFCKSGKL----------- 232
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
++ + +EM+ +G Y +I +K + A+ + N M++ G++ ++V
Sbjct: 233 -----EKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVV 287
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+ +++G + +A ++F E+ VL + P+ TYN ING + N E G ++ M
Sbjct: 288 TFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEM 347
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G K D++TYN L+ LCK + + +VKE+ + +V N T+S +I G + +
Sbjct: 348 SRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNS 407
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
A L + + G F+ + C+ A +L +M ++ +PG+ V
Sbjct: 408 DRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDV 463
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/172 (18%), Positives = 79/172 (45%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM + G ++ Y +I L K+ K A ++ ++ + + P+ ++ +++G ++
Sbjct: 345 EEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIR 404
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +L+ ++ +G P+ T+N+ ++ CK + E ++ M E P
Sbjct: 405 NNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVL 464
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+ + LC + + +L E+K + ++ + I+ A + D C
Sbjct: 465 SEIYHGLCCCGKEHLAMKLSSELKARHMMTKGFEKAKPINAGAERDDKTSIC 516
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 178/414 (42%), Gaps = 51/414 (12%)
Query: 12 LHLRKHRKWPLSPYKAKWHQTLD-QQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHS 70
L +R H SP +A L Q + +SL +P I P +++++L
Sbjct: 14 LRIRHHSTTTTSPPEATTLAALILNSTNSQTLAESLHSP------SIQWTPQLVNTILKR 67
Query: 71 FSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAH 130
+ P+A HF K L+ + +C +S DH ID+
Sbjct: 68 LWNHG----PKALHF-FKILSHHPSYCHQASSFDHA-------------IDICA------ 103
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
R +D L++ + + R R+G + +I + + GK
Sbjct: 104 RLRDFRTLWFLVSRMRSCRLGPSPRTF-AIIAERYAAMGK----------------PHRA 146
Query: 191 LGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+ M + G CF + + ++ L K ++V A + +K K D V Y +++N
Sbjct: 147 VTVFMSMHEYG-CFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGK-FKADCVSYNIIVN 204
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G + + KA E+ E++ GL P++ TYN+ +NG + M++
Sbjct: 205 GWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDI 264
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DV+TY +++ L V E+ R R + +M G++ ++ T++ +I L K + A +
Sbjct: 265 DVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIF 324
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EE + +G S ++ I GLC G +++A+EL+++M D D P + + L+
Sbjct: 325 EEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILI 378
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 146/286 (51%), Gaps = 9/286 (3%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
++LN M+ +G D ++I ++ ++ + DE + +MK+ G +V+Y +I
Sbjct: 364 DLLNLMVENGLSPDHHIFNIIFTAYAKKAMI--DEAMHIFNKMKQQGLSPDVVNYGALID 421
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+L K +V DA+ NQM ++G+ P+I + ++ G+ + + KA+E + E+L G+ P
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP 481
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
DV +N + LC + V ++I ME +G++P VI+Y TL+ C V ++ + +
Sbjct: 482 DVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSL 541
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M G+ + TY+ ++ G G I +A G+ E L G+ + + GL
Sbjct: 542 DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTT 601
Query: 395 GLVRKALELLKQMADKDVSPGAR--VW-EALLLSSVSKLDFVNTSF 437
+A EL M ++ G + +W ++L+ +SK + V+ +F
Sbjct: 602 RRFSEAKELYLNM----ITSGKQWNIWIYNIILNGLSKNNCVDEAF 643
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 41/339 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ R+ ++ G+ V+ + +L +C+ + L + + V+ M +LG
Sbjct: 106 RMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLC-EAMDILVKRMPELGCTPD 164
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQM---KSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+V Y +++ +++ +AL +L+ M + P++V Y +V+NG + KA
Sbjct: 165 VVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYN 224
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCK-----------QNNVEAGIK-------------- 297
LF E++ G+ P+V TY I+GLCK Q ++ G+K
Sbjct: 225 LFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYL 284
Query: 298 ----------MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
M+ M G KPD TY +LL LC R L M KGI N+
Sbjct: 285 SIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVA 344
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y I+I G A+KG + E LL + GL +F+ ++ ++ +A+ + +M
Sbjct: 345 IYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM 404
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ +SP + A L+ ++ KL V+ + ++ +Q++N
Sbjct: 405 KQQGLSPDVVNYGA-LIDALCKLGRVDDAVLKF-NQMMN 441
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 35/368 (9%)
Query: 86 VIKTLAENSQFCDISSVLDHIEKR--ENFETPEFI-FIDLIKTYADAHRFQDSVNLFYKI 142
++K L + + C+ +D + KR E TP+ + + L+K + + R ++++ L + +
Sbjct: 135 LLKGLCDAKRLCE---AMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMM 191
Query: 143 PKFR-----INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+ N V +AI I +GF +G+ D+ EM
Sbjct: 192 ADSQGRSCPPNVVSYAIVI------NGFFTEGQV----------------DKAYNLFLEM 229
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
G +V YT VI L K + V A G+ QM G+KPD Y +++G + +
Sbjct: 230 MDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+ + +E+ GL PD YTY +N LC + M G KP+V Y L
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGIL 349
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ L+ + +L+ M G+ + ++I+ A K I EA + + +GL
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGL 409
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNT 435
+ I LC+ G V A+ QM ++ V+P V+ +L+ L +V K +
Sbjct: 410 SPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469
Query: 436 SFIRLVDQ 443
+ +++Q
Sbjct: 470 FYFEMLNQ 477
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 157/356 (44%), Gaps = 22/356 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT-YADAHRFQDS 135
+P Y +I A ++ +L+ + EN +P+ ++I T YA ++
Sbjct: 340 KPNVAIYGILIHGYATKGALSEMHDLLNLMV--ENGLSPDHHIFNIIFTAYAKKAMIDEA 397
Query: 136 VNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
+++F K+ + ++ RV A+ N M+N+G + + ++
Sbjct: 398 MHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C + F EM G +V + ++ +L K +V A +++ M+ G +
Sbjct: 458 LCTVDKWEKAKEFYF--EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTR 515
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P ++ YT ++ G + +A + D +L +GL PD +TYN ++G C+ ++ +
Sbjct: 516 PGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGV 575
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M G P V+TY+T+L L R + +EL M G N+ Y+I+++GL+
Sbjct: 576 FREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSK 635
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ EA L + +K + + F+ I L + G A+ L ++ + P
Sbjct: 636 NNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 111/235 (47%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E++ ++EM G Y +++ L + +A + + M GIKP++ Y +++
Sbjct: 291 EVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILI 350
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G + + +L + ++ GL PD + +N+ K+ ++ + + M++ G
Sbjct: 351 HGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLS 410
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV+ Y L+ ALCK+ ++ +M +G+ N+ ++ ++ GL + +A
Sbjct: 411 PDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEF 470
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E LN+G+ F+ +C LC +G V KA L+ M PG + L+
Sbjct: 471 YFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLI 525
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ + ++ DA G+ +M +GI P +V Y+ +L+G+ + +A+EL+ ++
Sbjct: 556 YNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G +++ YN+ +NGL K N V+ K+ + + ++ T+N ++ AL K
Sbjct: 616 TSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNE 675
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L + G+V ++ TY ++ + L +G + E L G S M + +
Sbjct: 676 DAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
L RG + +A L ++ +K+ S A A+L+S +S+ ++
Sbjct: 736 RRLLHRGDITRAGAYLCKLDEKNFSLEAST-TAMLISLLSRDEY 778
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 35/250 (14%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K + + +LN M +G+ PD + ++ + +A +F+++
Sbjct: 346 YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMK 405
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL PDV Y I+ LCK V+ + M G P++ +N+L+ LC V +
Sbjct: 406 QQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWE 465
Query: 329 RLRELVKEMKWKGI-------------------VLNLQ----------------TYSIMI 353
+ +E EM +GI V+ Q +Y+ +I
Sbjct: 466 KAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLI 525
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
G G I EA L+ L+ GL ++ + G C+ G + A + ++M ++
Sbjct: 526 GGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGIT 585
Query: 414 PGARVWEALL 423
PG + +L
Sbjct: 586 PGVVTYSTIL 595
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 2/223 (0%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ A + L+ M++ G D T + +L C + D+ G +EM + G G+
Sbjct: 531 VGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI--DDAYGVFREMLRNGITPGV 588
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ ++ L + +A + M + G + +I Y ++LNG+ +A +LF
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L ++ T+N+ I L K E + + A + G PDV TY + + L +
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
L +L M+ G N + + ++ L +GDI A L
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYL 751
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 42/208 (20%)
Query: 263 LFDELL---VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
LF+ ++ + + PD TY++ I C+ +E G + + G + + I N LL+
Sbjct: 78 LFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLK 137
Query: 320 ALCKVRELNRLRE-LVKEMKWKGIV----------------------------------- 343
LC + L + LVK M G
Sbjct: 138 GLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197
Query: 344 ---LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
N+ +Y+I+I+G ++G + +A L E +++G+ + I GLC+ +V +A
Sbjct: 198 SCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257
Query: 401 LELLKQMADKDVSPGARVWEALLLSSVS 428
+ +QM DK V P + L+ +S
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLS 285
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 137/287 (47%), Gaps = 3/287 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A+++L M+ G T ++ L S+C+ S E + + +MKK G +
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG--CSSEAVELLGKMKKRGCVPNIQ 343
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+T +I L + K A+G+ ++M +DG+ P V Y ++N + V+ + A +F +
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G +P TYN I C +++ + + M + GS P+VITYNTL+ CK L
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
N L++ MK G+ + TY+ +I G + G + A L + G+ +
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
I G V AL L +M + P ++ + +++S SK + ++
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYN-VMISGFSKTNSIS 569
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 5/287 (1%)
Query: 140 YKIPKFRINRVGF---AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
Y IP + G A+E+L M G + +T + ++S + RD + +G +
Sbjct: 310 YTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL--SRDGKFEIAIGLYHK 367
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M G V Y +I L + + A I M S G P Y ++ + D
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA +FD++L G P+V TYN I G CKQ N+ ++++ M+ G KPD TY
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ + +L L M GI N TY+ +IDG + + +A L + + G
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
S ++ I G + + +A +M + + P + + +
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 126/277 (45%), Gaps = 4/277 (1%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ RV + +N + G+ + T LI + DL+ D + +M G +
Sbjct: 147 VKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYI----KMLNSGIRPSL 202
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ + +I L KK +V +A I++ + P+ YT ++ G + A +FD
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G P+ TY+ INGLC + +E + M+ M + G +P V TY L +LC
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ EL+ +MK +G V N+QT++ +I GL+ G A GL + L GL + ++
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC G A + K M P + + ++
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 149/368 (40%), Gaps = 30/368 (8%)
Query: 80 PEAYHFVIKTLAENSQFCDISSV--LDHIEKR---ENFETPEFIFIDLIKTYADAHRFQD 134
P Y + I ++ C +V L ++KR N +T F LI + +F+
Sbjct: 305 PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT----FTALISGLSRDGKFEI 360
Query: 135 SVNLFYK------IP-----KFRIN------RVGFAIEILNCMINDGFCVDGKTCSLILS 177
++ L++K +P IN R A I M++ G +T + I+
Sbjct: 361 AIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIK 420
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
C D+ ++ +M K G ++ Y +I K+ + +A+ +L MK +G+
Sbjct: 421 CFCLMGDIQKAMVI--FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL 478
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
KPD YT +++G A LF ++ G+ P+ TY I+G V+ +
Sbjct: 479 KPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALA 538
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M E G+ P TYN ++ K ++ +M +G++ N+ TY+ IDGL
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA--LELLKQMADKDVSPG 415
G A + E + + I GLCQ G A LL ++ P
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658
Query: 416 ARVWEALL 423
+ L+
Sbjct: 659 VDTYTTLV 666
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 103/215 (47%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT++I + + A + ++M DG P+ V Y+ ++NG+ + +A ++ +E++
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P VYTY + + LC ++++ M++ G P++ T+ L+ L + +
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L +M G+V TY+ +I+ L +G A + + L+ G + ++E I
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G ++KA+ + +M SP + L+
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLI 454
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 146/346 (42%), Gaps = 24/346 (6%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRIN 148
I K + + + +LI ++ + + + +LFY + + F +
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+ + M+ G +T ++++S + +S E F +M K G ++
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE--NFCGKMVKQGLLPNVIT 589
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT+ I L + + A I ++M+ P++ Y+ ++ G + QE + E+++ L
Sbjct: 590 YTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYG-LCQEGRAEDAEMYNLLA 648
Query: 269 VL---GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L G P+V TY + GLC + +++ M++ G +P Y LL CK
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + M G L+L Y +I L + I EA + + L K + +
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWT 768
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+ GL + G L+LL M ++ + + + +L +S LD
Sbjct: 769 VLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY-VMLARELSALD 813
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 173/408 (42%), Gaps = 68/408 (16%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKREN--FETPEFIFIDLIKTYADAHRFQDSVNL 138
+++ +++ L + L IEKR N + + F LI++Y +A FQ+SVNL
Sbjct: 104 QSFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNL 163
Query: 139 FYKIPKFRIN-----------------RVGFAIEILNCMIND-GFCVDGKTCSLILSSVC 180
F + K I+ R G A ++ + M G D T + ++S C
Sbjct: 164 FQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFC 223
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM--KSDGIK 238
+ + D+ +EM+ +V Y +I L + KV A +LN M K+ +
Sbjct: 224 KNSMV--DQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVH 281
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL------------ 286
P+IV YT +L G ++++ +A +F E+L GL P+ TYN I GL
Sbjct: 282 PNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGF 341
Query: 287 ------------------------CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
C +++A +K+ M + PD +Y+ L++ LC
Sbjct: 342 LIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 401
Query: 323 KVRELNRLRELVKEMKWKGIVLN-------LQTYSIMIDGLASKGDIIEACGLLEEALNK 375
E ++ L E+ K ++L Y++M + L + G +A + + + +
Sbjct: 402 LRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKR 461
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G SS + I GLC+ G + A ELL M ++ P +E L+
Sbjct: 462 GAQDPSS-YRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLI 508
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 6/246 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD--YT 210
+ + + N GF ++ L+L + R+L++ F E + G C + D +
Sbjct: 87 GLRFFDWVYNKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNG-CVKLQDRYFN 145
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-V 269
++IRS +++ + MK GI P ++ + +L+ ++ + A ++FDE+
Sbjct: 146 SLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRT 205
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ PD YT+N I+G CK + V+ + ME PDV+TYNT++ LC+ ++
Sbjct: 206 YGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKI 265
Query: 330 LRELVKEMKWKGIVL--NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
L+ M K + N+ +Y+ ++ G K +I EA + E L +GL + ++
Sbjct: 266 AHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTL 325
Query: 388 ICGLCQ 393
I GL +
Sbjct: 326 IKGLSE 331
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 149/356 (41%), Gaps = 30/356 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
++ +Y+C P Y+ +I L + ++L+ + K+ P + + L++
Sbjct: 233 TIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLR 292
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
Y +++ +F++ M+ G + T + ++ + E
Sbjct: 293 GYCMKQEIDEALLVFHE------------------MLTRGLKPNAVTYNTLIKGLSEAHR 334
Query: 185 LSSDELLGFVQEMKKLG-FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
DE+ GF+ F + +I++ + A+ + +M + + PD
Sbjct: 335 Y--DEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSAS 392
Query: 244 YTMVLNGVIVQEDYVKAEELFDEL----LVLG---LVPDVYTYNVYINGLCKQNNVEAGI 296
Y++++ + ++ ++ KAE LF+EL ++LG P YN+ LC +
Sbjct: 393 YSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAE 452
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K+ + + G++ D +Y TL+ LC+ + EL+ M + V + +TY ++IDGL
Sbjct: 453 KVFRQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGL 511
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G+ + A L+ L ++ F + L +R + LL M +K +
Sbjct: 512 LKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRI 567
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI+++ MI G D + + ++SS+C + ++ + V +M++ G+ Y ++
Sbjct: 116 AIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYA--MQLVDKMEEYGYPTNTATYNSL 173
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+R L + +L +L+++ G+ P+ Y+ +L + +A +L DE++ G
Sbjct: 174 VRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG 233
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ +YNV + GLCK+ E +++ + G P+V++YN LL++LC
Sbjct: 234 KPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANV 293
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ EM + TY+I+I L G A +LEE + +S ++ I LC
Sbjct: 294 LLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLC 353
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ V ++ L QM + +P + A+
Sbjct: 354 KDRKVDLVVKCLDQMMYRHCNPNEGTYNAI 383
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 11/311 (3%)
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
K + R+N F +E M+ G D + +L +C+ + + + ++ M
Sbjct: 72 KSKELRLNDAFFHLEF---MVEKGQKPDVFQATQLLYDLCKTCKMR--KAIKVMEMMIGS 126
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G YT ++ SL +K V A+ ++++M+ G + Y ++ G+ + + ++
Sbjct: 127 GIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQS 186
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+L D L+ GLVP+ YTY+ + K+ + K++ + G KP++++YN LL
Sbjct: 187 LQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTG 246
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK +L +E+ KG N+ +Y+I++ L ++G EA LL E
Sbjct: 247 LCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPS 306
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFI 438
+ ++ I L G ALE+L++M P A + ++ L K+D V +
Sbjct: 307 TVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLV----V 362
Query: 439 RLVDQILNTPC 449
+ +DQ++ C
Sbjct: 363 KCLDQMMYRHC 373
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 119/257 (46%), Gaps = 3/257 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L+ +I G + + +++L+ +C ++ +++ + +E+ GF +V Y +
Sbjct: 221 ASKLLDEIIAKGGKPNLVSYNVLLTGLC--KEGRTEDAMQLFRELPSKGFSPNVVSYNIL 278
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+RSL + + +A +L +M D P V Y +++ + + A E+ +E++
Sbjct: 279 LRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARF 338
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P +YN I LCK V+ +K + M P+ TYN + LC+ +
Sbjct: 339 KPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFS 397
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+++ + K + Y I+I L KG+ A LL E G S + I GLC
Sbjct: 398 IIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLC 457
Query: 393 QRGLVRKALELLKQMAD 409
G++ +A+E+ M +
Sbjct: 458 MEGMLNEAIEIFSVMEE 474
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 112/235 (47%), Gaps = 4/235 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R A+E+L MI F + + I++ +C+ R + D ++ + +M C
Sbjct: 322 RTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKV--DLVVKCLDQMM-YRHCNPNEG 378
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
N I +L ++ V +A I+ + + Y +V+ + + + A +L E+
Sbjct: 379 TYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMT 438
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD +TY+ I GLC + + I++ + MEE K D YN+L+ CK R +
Sbjct: 439 KYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTD 497
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
++ + M KG + N TY+I+++G+ + ++ A +L E + + QS++
Sbjct: 498 LALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTV 552
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 148/358 (41%), Gaps = 34/358 (9%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT-YADAHRFQDSV 136
P Y F+++ + + S +LD I + P + +++ T R +D++
Sbjct: 200 PNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG--KPNLVSYNVLLTGLCKEGRTEDAM 257
Query: 137 NLFYKIPK--FRINRVGFAIEILNCMINDGFC---------VDGKTCS--------LILS 177
LF ++P F N V + I +L + N+G +DG S LI S
Sbjct: 258 QLFRELPSKGFSPNVVSYNI-LLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 316
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
R ++ L ++EM + F Y +I L K KV + L+QM
Sbjct: 317 LTLHGR---TEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHC 373
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT---YNVYINGLCKQNNVEA 294
P+ Y + + +E V +E F + LG T Y + I LC++ N
Sbjct: 374 NPNEGTYNAI--ATLCEEGMV--QEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYP 429
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+++ M + G PD TY++L++ LC LN E+ M+ + I L+ + Y+ +I
Sbjct: 430 AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENIKLDTENYNSLIL 488
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G A + E + KG + + + G+ + A E+L+++ +DV
Sbjct: 489 GCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV 546
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI+++ MI G D + + ++SS+C + ++ + V +M++ G+ Y ++
Sbjct: 116 AIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYA--MQLVDKMEEYGYPTNTATYNSL 173
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+R L + +L +L+++ G+ P+ Y+ +L + +A +L DE++ G
Sbjct: 174 VRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG 233
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ +YNV + GLCK+ E +++ + G P+V++YN LL++LC
Sbjct: 234 KPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANV 293
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ EM + TY+I+I L G A +LEE + +S ++ I LC
Sbjct: 294 LLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLC 353
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ V ++ L QM + +P + A+
Sbjct: 354 KDRKVDLVVKCLDQMMYRHCNPNEGTYNAI 383
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 11/311 (3%)
Query: 141 KIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
K + R+N F +E M+ G D + +L +C+ + + + ++ M
Sbjct: 72 KSKELRLNDAFFHLEF---MVEKGQKPDVFQATQLLYDLCKTCKMR--KAIKVMEMMIGS 126
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G YT ++ SL +K V A+ ++++M+ G + Y ++ G+ + + ++
Sbjct: 127 GIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQS 186
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+L D L+ GLVP+ YTY+ + K+ + K++ + G KP++++YN LL
Sbjct: 187 LQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTG 246
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK +L +E+ KG N+ +Y+I++ L ++G EA LL E
Sbjct: 247 LCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPS 306
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFI 438
+ ++ I L G ALE+L++M P A + ++ L K+D V +
Sbjct: 307 TVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLV----V 362
Query: 439 RLVDQILNTPC 449
+ +DQ++ C
Sbjct: 363 KCLDQMMYRHC 373
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 119/257 (46%), Gaps = 3/257 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L+ +I G + + +++L+ +C ++ +++ + +E+ GF +V Y +
Sbjct: 221 ASKLLDEIIAKGGKPNLVSYNVLLTGLC--KEGRTEDAMQLFRELPSKGFSPNVVSYNIL 278
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+RSL + + +A +L +M D P V Y +++ + + A E+ +E++
Sbjct: 279 LRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARF 338
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P +YN I LCK V+ +K + M P+ TYN + LC+ +
Sbjct: 339 KPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFS 397
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+++ + K + Y I+I L KG+ A LL E G S + I GLC
Sbjct: 398 IIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLC 457
Query: 393 QRGLVRKALELLKQMAD 409
G++ +A+E+ M +
Sbjct: 458 MEGMLNEAIEIFSVMEE 474
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 112/235 (47%), Gaps = 4/235 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R A+E+L MI F + + I++ +C+ R + D ++ + +M C
Sbjct: 322 RTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKV--DLVVKCLDQMM-YRHCNPNEG 378
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
N I +L ++ V +A I+ + + Y +V+ + + + A +L E+
Sbjct: 379 TYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMT 438
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PD +TY+ I GLC + + I++ + MEE K D YN+L+ CK R +
Sbjct: 439 KYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTD 497
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
++ + M KG + N TY+I+++G+ + ++ A +L E + + QS++
Sbjct: 498 LALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTV 552
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 148/358 (41%), Gaps = 34/358 (9%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT-YADAHRFQDSV 136
P Y F+++ + + S +LD I + P + +++ T R +D++
Sbjct: 200 PNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG--KPNLVSYNVLLTGLCKEGRTEDAM 257
Query: 137 NLFYKIPK--FRINRVGFAIEILNCMINDGFC---------VDGKTCS--------LILS 177
LF ++P F N V + I +L + N+G +DG S LI S
Sbjct: 258 QLFRELPSKGFSPNVVSYNI-LLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 316
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
R ++ L ++EM + F Y +I L K KV + L+QM
Sbjct: 317 LTLHGR---TEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHC 373
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT---YNVYINGLCKQNNVEA 294
P+ Y + + +E V +E F + LG T Y + I LC++ N
Sbjct: 374 NPNEGTYNAI--ATLCEEGMV--QEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYP 429
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+++ M + G PD TY++L++ LC LN E+ M+ + I L+ + Y+ +I
Sbjct: 430 AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENIKLDTENYNSLIL 488
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G A + E + KG + + + G+ + A E+L+++ +DV
Sbjct: 489 GCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQLRDV 546
>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
Length = 1295
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 135/266 (50%), Gaps = 3/266 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ +V A++I + + GF D S+IL C+ DL + L F +M
Sbjct: 1019 KTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDLWF--DMIHHNIAPD 1076
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +YT++I +L + + DALG+ M +G+ P+IV T++++ Q +A D
Sbjct: 1077 VYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSFSKQGLVGEAFLFLD 1136
Query: 266 ELL-VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ LG+VP++ Y V INGLCK N + A M + G PDV+ Y+ +++ K
Sbjct: 1137 RMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRGYVPDVVLYSIIIEGFVKA 1196
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L L +M +G+ N+ TYS +I+GL + + EA GL+ + + + L + ++
Sbjct: 1197 LKLQEALRLYHKMLDEGVKPNIFTYSSLINGLCNDDRLPEAMGLIRDMIGEDLLLDNVLY 1256
Query: 385 DETICGLCQRGLVRKALELLKQMADK 410
I C+R ++ A+E+ ++ K
Sbjct: 1257 TSIIACYCRRLNMKAAMEMAQRDGKK 1282
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 7/279 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFCFG 205
+V AIE+ + M G+ D + S+++ +C+Q DL L G+ ++EM + G C
Sbjct: 951 GQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDL----LKGYDMLEEMARNGICPN 1006
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y++++ L K +V AL I ++ G + D + Y+++L+G D +L+
Sbjct: 1007 QVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDLWF 1066
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ + PDVY Y I LC+ N++ + + M E G P+++T L+ + K
Sbjct: 1067 DMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSFSKQG 1126
Query: 326 ELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ + M GIV NL Y +MI+GL + + + +G ++
Sbjct: 1127 LVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRGYVPDVVLY 1186
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + +++AL L +M D+ V P + +L+
Sbjct: 1187 SIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLI 1225
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 148/338 (43%), Gaps = 16/338 (4%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINR--VGFAIEIL----NCMINDGFCVDGKT 171
++ +I+ + ++ F+D++ + + ++R F ++ L M D K+
Sbjct: 799 VYAAVIRIFVESSMFEDALLTYIQAKNIGVDRRLCNFLLKCLVEGNQIMYARSLFDDMKS 858
Query: 172 C---------SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
C S+++S +E + EM+ G Y + L + +V
Sbjct: 859 CGPSPNVCSYSILMSMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQV 918
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
A L + G C+ V++G + KA E+F + G VPDV++Y++
Sbjct: 919 TSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSIL 978
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
++GLCKQ ++ G M+ M G P+ ++Y++LL LCK ++ ++ K ++ G
Sbjct: 979 VDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGF 1038
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ YSI++ G D+ L + ++ + + I LC+ ++ AL
Sbjct: 1039 EHDQINYSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALG 1098
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
+ + M + +SP V +L+ S SK V +F+ L
Sbjct: 1099 VFELMLENGLSPNI-VTCTILVDSFSKQGLVGEAFLFL 1135
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 122/255 (47%), Gaps = 2/255 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M ++G + T L +C R ++S F+Q + + G + V
Sbjct: 886 AFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTS--AWDFLQTLSQSGGPCSNYCFNAV 943
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + +V A+ + + MK G PD+ Y+++++G+ Q D +K ++ +E+ G+
Sbjct: 944 IHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGI 1003
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +Y+ ++GLCK V +K+ +++ G + D I Y+ +L C+ +L + +
Sbjct: 1004 CPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISD 1063
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +M I ++ Y+ +I L ++ +A G+ E L GL +
Sbjct: 1064 LWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSFS 1123
Query: 393 QRGLVRKALELLKQM 407
++GLV +A L +M
Sbjct: 1124 KQGLVGEAFLFLDRM 1138
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 145/287 (50%), Gaps = 6/287 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ--EMKKLGFCFG 205
VG A + + + G+ + T I++ +C+ D + + +++ E + GF
Sbjct: 91 GNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGA--ISYLEKIEGRNRGFDL- 147
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y+ ++ SL K + AL + M GI+PD+V Y +++G+ + +A L
Sbjct: 148 LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLG 207
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G++P+V T+NV ++ CK+ + ++ M +G +PDV+TYN+++ C +
Sbjct: 208 NMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLS 267
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++N ++ + M KG++ N+ TYS +I G +I +A +L+E +N GL +
Sbjct: 268 QMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWS 327
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
I G C+ G A+EL M + P + A++L + K F
Sbjct: 328 TLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTC-AIILDGLFKCQF 373
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 137/280 (48%), Gaps = 4/280 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A +L M+ G + +T ++++ + C++ +S + ++ F M +G +V Y +
Sbjct: 202 ATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCF---MVHVGVEPDVVTYNS 258
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI ++ DA+ + M G+ P++V Y+ +++G + KA + DE++ G
Sbjct: 259 VISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNG 318
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
L DV T++ I G CK EA I++ M E P++ T +L L K + +
Sbjct: 319 LNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAI 378
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L ++M+ + LN+ TY+I++DG+ S G +A L +KG+ + I GL
Sbjct: 379 SLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGL 438
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
C+ GL+ A +LL +M + P + L+ + + D
Sbjct: 439 CKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYD 478
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
D+ + +VK + A+ ++ S G+KPD+ T+V+N + + V + +
Sbjct: 9 DFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAM 68
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+G+ P V T+ INGLC + NV A + +E++G + + T+ T++ LCKV +
Sbjct: 69 FKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDT 128
Query: 328 NRLRELVKEMKWKGIVLNLQ-TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+++++ + +L YS ++D L G + A KG+ ++
Sbjct: 129 AGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNS 188
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC G +A LL M K + P + + L+
Sbjct: 189 LIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLV 225
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+TC++IL + + + S E + ++M+K+ +V Y V+ + K DA +
Sbjct: 359 QTCAIILDGLFKCQFHS--EAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELF 416
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+ + S GI+ D+V YT ++ G+ + AE+L ++ G P+ +TYNV + GL ++
Sbjct: 417 SCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQR 476
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
++ K + M+ G D T L+ +E + L+ +++
Sbjct: 477 YDISRSTKYLMLMKGKGLSADATTTELLISYFSANKENSALQVFLQK 523
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 4/240 (1%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+S++ LG + EMK G + Y +I+ L K+ +A +L +M G++P+ + YT
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++ +A + ++L G P+V TY I+GLCK +++ I M +L
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P+V Y L+ LCK LN +L EM KG+ L+ Y+ ++DG +G++ +A
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 366 CGLLEEALNKGLCTQSSMFDET--ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + ++ GL Q +F T I G C ++ +A E+ +M ++P V+ L+
Sbjct: 593 FALKAKMIDSGL--QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 145/316 (45%), Gaps = 20/316 (6%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCV 167
KRE F + + ++++ LF ++ R+ + C+I DG C
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM---RVRGMALNEFTYTCLI-DGTCK 340
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
G+ D+ + + EM + G +V YT ++ L K+ KV +A
Sbjct: 341 AGRL----------------DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAED 384
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L M+ G++ + + YT +++G + ++ KA L E+ GL D+ Y I GLC
Sbjct: 385 VLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLC 444
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ ++ ++ M+E G +P+ I Y T++ A K ++ +++++ G N+
Sbjct: 445 NVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVI 504
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY +IDGL G I EA + + GL + + GLC+ G + +A++L +M
Sbjct: 505 TYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEM 564
Query: 408 ADKDVSPGARVWEALL 423
K +S V+ ALL
Sbjct: 565 VHKGMSLDKVVYTALL 580
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 137/297 (46%), Gaps = 7/297 (2%)
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
AD + +N F K + FA M +G + T S + + C++ +
Sbjct: 256 ADVVTYNALINCFCKFGRMETAYGYFA-----AMKREGVMANVVTFSTFVDAFCKEGLVR 310
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E + +M+ G YT +I K ++ DA+ +L++M G+ ++V YT+
Sbjct: 311 --EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ + +AE++ + G+ + Y I+G N E + +++ M+ G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+ D+ Y L+Q LC V +L+ + L+ +M G+ N Y+ M+D G + EA
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L++ L+ G + I GLC+ G + +A+ +M D + P + + AL+
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 132/264 (50%), Gaps = 2/264 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+ AI +L+ M+ G ++ T ++++ +C++R ++ E ++ M+K G
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE--DVLRMMEKAGVRAN 397
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ YT +I + ALG+L++MK+ G++ DI Y ++ G+ +A+ L
Sbjct: 398 ELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLT 457
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ GL P+ Y ++ K V I M+ + + G +P+VITY L+ LCK
Sbjct: 458 KMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAG 517
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +M+ G+ N+Q Y+ ++DGL G + EA L E ++KG+ ++
Sbjct: 518 SIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYT 577
Query: 386 ETICGLCQRGLVRKALELLKQMAD 409
+ G ++G + A L +M D
Sbjct: 578 ALLDGYLKQGNLHDAFALKAKMID 601
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 118/236 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE+ V+EM++ G +V Y +I K ++ A G MK +G+ ++V ++
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ + +A +LF ++ V G+ + +TY I+G CK ++ I ++ M G
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+V+TY L+ LCK R++ ++++ M+ G+ N Y+ +I G + +A G
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL E NKGL S++ I GLC + +A LL +M + + P ++ ++
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 108/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI L K+ ++ +A + ++MK G PD+V + +++G + + E+L +E+ G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
DV TYN IN CK +E A M+ G +V+T++T + A CK +
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L +M+ +G+ LN TY+ +IDG G + +A LL+E + +G+ + + GL
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ V +A ++L+ M V ++ L+
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLI 405
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P++ + +V++ + + + +A LF + +G +PDV T+N I+G K ++ ++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M G K DV+TYN L+ CK + MK +G++ N+ T+S +D
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+G + EA L + +G+ + I G C+ G + A+ LL +M + V
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 118/255 (46%), Gaps = 2/255 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ +L+ M N G +D ++ +C L DE + +M + G + YT +
Sbjct: 417 ALGLLSEMKNKGLELDISLYGALIQGLCNVHKL--DEAKSLLTKMDESGLEPNYIIYTTM 474
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K KV +A+ +L ++ G +P+++ Y +++G+ +A F+++ LGL
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V Y ++GLCK + +++ M G D + Y LL K L+
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +M G+ L+L Y+ I G + + EA + E + G+ ++++ I
Sbjct: 595 LKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQ 654
Query: 393 QRGLVRKALELLKQM 407
+ G + +A+ L +M
Sbjct: 655 KLGNLEEAISLQDEM 669
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 19/248 (7%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRV 150
K + E ++ LI+ + H+ ++ +L K+ + F+ +V
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
AI +L +++ GF + T ++ +C+ S DE + +M+ LG + YT
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAG--SIDEAISHFNKMRDLGLDPNVQAYT 542
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ L K + +A+ + N+M G+ D V YT +L+G + Q + A L +++
Sbjct: 543 ALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL D++ Y +I+G C N + ++ + M G PD YN L+ K+ L
Sbjct: 603 GLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662
Query: 331 RELVKEMK 338
L EM+
Sbjct: 663 ISLQDEME 670
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 30/245 (12%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y +I+ L + + S+L +++ E I+ ++ + + +++ + KI
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLTKMDE-SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI 494
Query: 143 --PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD------------ 188
F+ N + + C + DG C G I S + RDL D
Sbjct: 495 LDSGFQPNVITY------CALIDGLCKAGSIDEAI-SHFNKMRDLGLDPNVQAYTALVDG 547
Query: 189 --------ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
E + EM G V YT ++ +K+ + DA + +M G++ D
Sbjct: 548 LCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+ CYT ++G +A E+F E++ G+ PD YN I+ K N+E I +
Sbjct: 608 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQD 667
Query: 301 CMEEL 305
ME +
Sbjct: 668 EMERV 672
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 145/308 (47%), Gaps = 21/308 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F + L+ YA F D + LF N M ++G + ++++
Sbjct: 406 FSYCTLLHGYASEGCFADMIGLF------------------NSMKSNGIAANCHVFTILI 447
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+ +R + D +L F EM++ G +V Y+ VI + + ++ DA+ NQM + G
Sbjct: 448 HAY-AKRGMVDDAMLIFT-EMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG 505
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV-PDVYTYNVYINGLCKQNNVEAG 295
I+P+ Y+ ++ G + VKA+EL E++ G+ PD+ ++ IN LCK V
Sbjct: 506 IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDA 565
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ ++G +P VIT+N+L+ C V ++++ +++ M+ G+ ++ TY+ ++DG
Sbjct: 566 HDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDG 625
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
G I + L E KG+ + + + GL + G A + +M + +
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT 685
Query: 416 ARVWEALL 423
++ +L
Sbjct: 686 VSIYGIIL 693
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 159/391 (40%), Gaps = 51/391 (13%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LLH S C P +Y V+K L +NS +L + K+ +P D++
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSP-----DVVAYS 269
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
H F F G A + + M G D T +LI+ ++C+ R +
Sbjct: 270 TVIHGF------------FNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317
Query: 187 SDELL---------------------GFV------------QEMKKLGFCFGMVDYTNVI 213
EL+ G+ +EMKK G +V + +
Sbjct: 318 KAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFL 377
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
SL K + +A + M + G KPDI Y +L+G + + LF+ + G+
Sbjct: 378 ASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIA 437
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
+ + + + I+ K+ V+ + + M++ G PDV+TY+T++ ++ L E
Sbjct: 438 ANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEK 497
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFDETICGLC 392
+M +GI N YS +I G G +++A L+ E +NKG+ F I LC
Sbjct: 498 FNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLC 557
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V A ++ D PG + +L+
Sbjct: 558 KDGRVMDAHDIFDLATDIGERPGVITFNSLI 588
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 6/286 (2%)
Query: 148 NRVGFAIEILNCMINDGFCV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG- 205
NR A+ +L +++ CV + + S++L ++C+ S L +Q M K G
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNS--MSQRALDLLQMMAKQGGACSP 263
Query: 206 -MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y+ VI + + A + ++M G+KPD+V Y ++++ + KAE +
Sbjct: 264 DVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVL 323
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G PD TY+ I+G ++ KM M++ G P+++T N+ L +LCK
Sbjct: 324 RQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKH 383
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
E M KG ++ +Y ++ G AS+G + GL + G+ +F
Sbjct: 384 GRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVF 443
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
I +RG+V A+ + +M + VSP V + ++S+ S++
Sbjct: 444 TILIHAYAKRGMVDDAMLIFTEMQQQGVSPDV-VTYSTVISTFSRM 488
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 16/250 (6%)
Query: 163 DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
DG+C+ GK D+ + M+ +G +V Y ++ K ++
Sbjct: 589 DGYCLVGKM----------------DKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRI 632
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
D L + +M+ G+KP+ V Y ++L G+ V A + F E++ G V Y +
Sbjct: 633 NDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGII 692
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
+ GLC+ N + I + + + K + NT++ A+ KV+ +EL + G+
Sbjct: 693 LGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGL 752
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ N TY +MI L G + +A + G+ S + + I L ++G + KA
Sbjct: 753 LPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGN 812
Query: 403 LLKQMADKDV 412
L ++ K +
Sbjct: 813 YLSKVDGKRI 822
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
VP TYN+ ++ C+ + G+ + C+ G K D IT NTLL+ LC NR E
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYA---NRTEE 210
Query: 333 ----LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE-EALNKGLCTQSSM-FDE 386
L+ M G V N +YSI++ L A LL+ A G C+ + +
Sbjct: 211 AVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYST 270
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSP 414
I G G KA L +M + V P
Sbjct: 271 VIHGFFNEGETGKACSLFHEMTRQGVKP 298
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G + Y ++ L + +A+ + ++ + +K I ++N +
Sbjct: 675 HEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKV 734
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A+ELF + GL+P+ TY V I L K VE M + ME+ G P
Sbjct: 735 QRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLL 794
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
N +++ L + E+ + + ++ K I+L T S+M+ + KG E LL
Sbjct: 795 NRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 118/219 (53%), Gaps = 4/219 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +++R+ + +++ + MKS G+ P +V + +L ++ + A++++DE+L
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211
Query: 269 -VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ PD +T+N+ I G C V+ G ++ + G +PDV+TYNTL+ LC+ ++
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271
Query: 328 NRLRELVKEMKWKGIVL--NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+VK M K + L N+ TY+ +I G +K +I +A + EE +N+GL + ++
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331
Query: 386 ETICGLCQRGLVRKALELLKQMA-DKDVSPGARVWEALL 423
I GLC+ K ++L+ A D SP + L+
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLM 370
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 164/408 (40%), Gaps = 68/408 (16%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKREN--FETPEFIFIDLIKTYADAHRFQDSVNL 138
++Y +++ L N + L IEKR + F L++ + A FQ+S+ +
Sbjct: 112 QSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKV 171
Query: 139 FYKIPKFRIN-----------------RVGFAIEILNCMIND-GFCVDGKTCSLILSSVC 180
F + ++ R A ++ + M++ G D T ++++ C
Sbjct: 172 FTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFC 231
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM--KSDGIK 238
+ D+ ++ + G +V Y ++ L + KV A ++ M KS +
Sbjct: 232 MNGMV--DDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLN 289
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ--------- 289
P++V YT ++ G + + KA +F+E++ GL + TYN I GLC+
Sbjct: 290 PNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDI 349
Query: 290 ---------------------------NNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
N++ +K+ M EL +PD TY+ L+++LC
Sbjct: 350 LEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLC 409
Query: 323 KVRELNRLRELVKEMKWKGIVLN-------LQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+ + +L+ ++ + I+L+ + Y+ + L G +A + + +
Sbjct: 410 QGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRR 469
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G S + I G C+ G ELL M KD P +E+L+
Sbjct: 470 GTQDPPS-YKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLI 516
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 141/356 (39%), Gaps = 32/356 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
+ + S + CEP Y+ ++ L + +V+ + K+ P + + LI+
Sbjct: 242 IFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRG 301
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
Y + ++ +F + M+N G + T + ++ +CE R
Sbjct: 302 YCAKREIEKALAVFEE------------------MVNQGLKANNITYNTLIKGLCEARKF 343
Query: 186 SS--DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D L G + F + ++ + DAL + +M I+PD
Sbjct: 344 EKIKDILEGTAGDGT---FSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSAT 400
Query: 244 YTMVLNGVIVQEDYVKAEELFDELL---VL----GLVPDVYTYNVYINGLCKQNNVEAGI 296
Y+ ++ + Y KAE+L D+LL +L G P V YN LC+ +
Sbjct: 401 YSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAE 460
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K + G++ D +Y TL+ CK EL+ M K + +TY +I+GL
Sbjct: 461 KAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGL 519
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ A LE+ L SS F + L ++G ++ L++ M DK++
Sbjct: 520 LHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNI 575
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 104/270 (38%), Gaps = 24/270 (8%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y+ +IK L E +F I +L+ F F L+ + A D++ +F +
Sbjct: 329 TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKL 200
+ + +I D T S ++ S+C+ +++LL + E K L
Sbjct: 389 MSELKIQ------------------PDSATYSALVRSLCQGGHYEKAEDLLDKLLERKIL 430
Query: 201 GFCFG----MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
G + Y + + L + K A Q+ G + D Y ++ G +
Sbjct: 431 LSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGT 489
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ EL +L PD TY INGL + ++ + M +P+ T+++
Sbjct: 490 FESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHS 549
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNL 346
+L L + + L++ M K I NL
Sbjct: 550 ILAKLLEQGRASESASLIQLMLDKNIRQNL 579
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 152/301 (50%), Gaps = 4/301 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+L M+ G+ + T + ++ +C ++ + F++ ++ ++ YT +
Sbjct: 294 AFEMLEEMVGKGWKPNVYTHTSLIDGLC-KKGWTEKAFRLFLKLVRSENHKPNVLTYTAM 352
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I +++K+ A +L++MK G+ P+ YT +++G ++ +A +L + + G
Sbjct: 353 ISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGF 412
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ TYN +NGLCK+ V+ KM+ + G KPD TYN L+ CK + +
Sbjct: 413 SPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALA 472
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +M GI ++ +Y+ +I + + E+ EEA+ G+ + + ICG C
Sbjct: 473 LFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYC 532
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILNTPCK 450
+ G + A++ +++D +P + + A++ L SK D + + ++++ L PC+
Sbjct: 533 REGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGL-VPCE 591
Query: 451 M 451
+
Sbjct: 592 V 592
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 38/313 (12%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ R+ A+E++ M N G + +T + I+ E + ELL +EM G
Sbjct: 148 VGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELL--FEEMCVRGVQPDS 205
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y ++ K + +A L+ M G D +T++++ + +A F
Sbjct: 206 ISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRR 265
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK--- 323
L+ +GL P++ + I GLCK+ +++ +M+ M G KP+V T+ +L+ LCK
Sbjct: 266 LVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGW 325
Query: 324 -----------VR----------------------ELNRLRELVKEMKWKGIVLNLQTYS 350
VR +LNR L+ MK +G+V N TY+
Sbjct: 326 TEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYT 385
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+IDG G+ A L+ ++G ++ + GLC+RG V++A ++L+
Sbjct: 386 TLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQN 445
Query: 411 DVSPGARVWEALL 423
+ P + L+
Sbjct: 446 GLKPDKFTYNILM 458
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 53/214 (24%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL---GFCFGM--- 206
A +++N M ++GF + T + I++ +C++ G VQE K+ GF G+
Sbjct: 400 AYDLMNLMSSEGFSPNLCTYNAIVNGLCKR---------GRVQEAYKMLEDGFQNGLKPD 450
Query: 207 -VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF- 264
Y ++ K+E + AL + N+M GI+PDI YT ++ V +E+ +K E+F
Sbjct: 451 KFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLI-AVFCRENRMKESEMFF 509
Query: 265 DELLVLGLVP-----------------------------------DVYTYNVYINGLCKQ 289
+E + +G++P D TY I+GLCKQ
Sbjct: 510 EEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQ 569
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+ + + M E G P +T TL CK
Sbjct: 570 SKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 158/327 (48%), Gaps = 25/327 (7%)
Query: 122 LIKTYADAHRFQDSVN-LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
L+K + +A R ++++ L ++ P+ L C + D F + S++L S+C
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPE------------LGC-VPDVF-----SYSILLKSLC 193
Query: 181 EQ-RDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+Q + +D+LL + E + C +V Y VI K+ V A + +M GI
Sbjct: 194 DQGKSGQADDLLRMMAEGGAV--CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 251
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD V Y+ V++ + KAE +++ G++P+ +TYN I G + +++
Sbjct: 252 PDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRV 311
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M PDV+T+N L+ +LCK ++ R++ M KG ++ +Y+IM++G A+
Sbjct: 312 FKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 371
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
KG +++ L + L G+ F+ I G++ KA+ + +M D V P
Sbjct: 372 KGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLT 431
Query: 419 WEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ ++ L + K+D F +++DQ
Sbjct: 432 YTTVIAALCRIGKMDDAMEKFNQMIDQ 458
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 116/235 (49%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +EM++ +V + ++ SL K K+ +A + + M G PD+ Y ++L
Sbjct: 307 EAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 366
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG + V +LFD +L G+ P + T+NV I ++ + + M + G K
Sbjct: 367 NGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+V+TY T++ ALC++ +++ E +M +G+ + Y +I G + G +++A L
Sbjct: 427 PNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E +N G+ +F I LC+ G V A + + + P A V+ L+
Sbjct: 487 ISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI ++ A+E N MI+ G D ++ C L + L + E+ G
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL--ISEIMNNGMHLD 498
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++++I +L K +V DA I + + G+ P V Y+M+++G + KA +FD
Sbjct: 499 IVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+ Y +NG CK ++ G+ + M + G KP I YN ++ L +
Sbjct: 559 AMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ EM GI +N TYSI++ GL EA L +E + +
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 678
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I G+ Q V +A +L ++ + P
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSGLVP 707
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM + G V Y++V+ +L K + A L QM + G+ P+ Y ++ G
Sbjct: 243 KEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSST 302
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +F E+ ++PDV T+N+ + LCK ++ + M G PDV +Y
Sbjct: 303 GQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N +L L + +L M GI + T++++I A+ G + +A + E +
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRD 422
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + I LC+ G + A+E QM D+ V+P + L+
Sbjct: 423 HGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ + EM+ G ++ YT VI +L + K+ DA+ NQM G+ PD Y +
Sbjct: 411 DKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G +KA+EL E++ G+ D+ ++ IN LCK V + +G
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P + Y+ L+ C V ++ + + M GI N Y +++G G I E
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L E L KG+ + +++ I GL + G A +M + ++
Sbjct: 591 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 138/336 (41%), Gaps = 21/336 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AYH +I+ + ++ I +F +I R D+ N
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEI-MNNGMHLDIVLFSSIINNLCKLGRVMDAQN 520
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+F +N ++ M+ DG+C+ GK ++ L M
Sbjct: 521 IF----DLTVNVGLHPTAVVYSMLMDGYCLVGKM----------------EKALRVFDAM 560
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
G V Y ++ K ++ + L + +M GIKP + Y ++++G+
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 620
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
V A+ F E+ G+ + TY++ + GL K + I + + + K D+IT NT+
Sbjct: 621 VPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 680
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ + + R + ++L + G+V + TYSIMI L +G + EA + N G
Sbjct: 681 IAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 740
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
S + + + L ++ + +A L ++ +++ S
Sbjct: 741 EPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 776
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G Y+ V+R L K +A+ + ++++ +K DI+ ++ G+
Sbjct: 628 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 687
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A++LF + GLVP V TY++ I L K+ VE M + M+ G +PD
Sbjct: 688 RRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 747
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
N +++ L K E+ R + ++ + L T +++D +SKG
Sbjct: 748 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 38/190 (20%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE----- 326
L P +TY + ++ + + E + + G + D+I N LL+ C+ +
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166
Query: 327 ---LNRLRE----------------------------LVKEMKWKGIVL--NLQTYSIMI 353
L+R E L++ M G V ++ Y+ +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DG +GD+ +AC L +E + +G+ + + LC+ + KA L+QM +K V
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286
Query: 414 PGARVWEALL 423
P + L+
Sbjct: 287 PNNWTYNNLI 296
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 123/271 (45%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++N M+ G + T + I+ C+ + +S L + M+ G YT +
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS--ALRILDLMRDGGCKPDEWSYTEL 501
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K K+ A G+ N+M DG+ P+ V YT +++G E A L + + G
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V TYNV I+GL KQNN ++ M E G P+V+TY ++ LCK + E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M +G + NL TYS +I L +G + EA L E GL + + I
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G V A L +M P + L+
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+G M + G V Y +I LV+ ++ A +LN M +G P+IV Y ++ G
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ D KA + + +L G ++ TYN I G C N + ++++ M + G KPD
Sbjct: 435 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPD 494
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+Y L+ CK+ ++ L EM G+ N TY+ +IDG + A LLE
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G ++ I GL ++ A EL K M ++ + P + A++
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 116/233 (49%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ F+ + + G G+ Y+ ++ L + + ++M S+G++P+++ Y V+N
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + AE + ++ + PD +TY I G C+++++++ +++ M + G +P+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+TY+TL+ LC +N +L++EM GI+ T + I L G +A L
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ NKG + I GLC G+++ A+ L +M+ V P + AL+
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALI 397
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 143/341 (41%), Gaps = 21/341 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y+ VI L ++ D +++ + + E F + +I + H
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESE-MSPDTFTYTSMILGHCRKHDLDS-------- 268
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
A+++ N M +G + T S +++ +C+ + +E ++EM G
Sbjct: 269 ----------ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV--NEAFDLIREMILHGI 316
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
T I +L DA + MK+ G +P++ YT +++G+ V A
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIG 376
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
LF + G+ P+ TYN IN L + ++ ++ M G P+++TYN +++ C
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC 436
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ + + ++ M +G NL TY+ +I G G+ A +L+ + G
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E ICG C+ + A L +M D + P + AL+
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 32/326 (9%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I+++ A + N M++DG C + T + ++ C+ L D ++ MK+ G
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL--DTATSLLEHMKRSGCRPN 564
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I L K+ A + M +GI P++V YT +++G+ A E+F+
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ G +P++ TY+ I L ++ VE + A +E G PD ITY +++A
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG-----------LASKGDIIEACGLLEEA-- 372
++ + M G L TY ++I G LA+ D++ C +
Sbjct: 685 KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744
Query: 373 -------------LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
L+ GL Q + + L G +A ELL M + + P +
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQ--NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAY 802
Query: 420 EALLLS--SVSKLDFVNTSFIRLVDQ 443
+LL S V +D F + Q
Sbjct: 803 NSLLCSLLRVRNVDLAMGVFKHMSTQ 828
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 133/351 (37%), Gaps = 77/351 (21%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+SLL C P + Y+ +I L K+ NF E +L K
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLT----------------KQNNFSGAE----ELCK 589
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ F + V I DG C +G T SL L
Sbjct: 590 VMIEEGIFPNVVTYTAMI--------------------DGLCKNGST-SLALE------- 621
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+M + G ++ Y+++IR+L ++ KV +A + +++ G+ PD + Y
Sbjct: 622 --------MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ I+ A ++ G P ++TY V I GL + + +
Sbjct: 674 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE--------YLLADQR 725
Query: 305 LGSKPDVIT-----YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
L + PDV+ Y T Q V +L EL L++Q + ++ L++
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSA-KLAELDPG-------LSVQVQNALVSNLSTA 777
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
G EA LL +++GLC ++ +C L + V A+ + K M+ +
Sbjct: 778 GRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%)
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+E + D L GL ++ Y+ + L + A + M G +P+++
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN ++ ALCK + ++K++ + + TY+ MI G K D+ A + +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+G + + I GLC G V +A +L+++M + P A
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ +A EL ++ GL PD YN + L + NV+ + + M G + + Y
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
L+ ALC++ R + M + + +++IDGL G
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 123/271 (45%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++N M+ G + T + I+ C+ + +S L + M+ G YT +
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA--LRILDLMRDGGCKPDEWSYTEL 501
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K K+ A G+ N+M DG+ P+ V YT +++G E A L + + G
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V TYNV I+GL KQNN ++ M E G P+V+TY ++ LCK + E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M +G + NL TYS +I L +G + EA L E GL + + I
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G V A L +M P + L+
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 116/233 (49%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ F+ + + G G+ Y+ ++ L + + ++M S+G++P+++ Y V+N
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + AE + ++ + PD +TY I G C+++++++ +++ M + G +P+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+TY+TL+ LC +N +L++EM GI+ T + I L G +A L
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ NKG + I GLC GL++ A+ L +M+ V P + AL+
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+G M + G V Y +I LV+ ++ A +LN M +G P+IV Y ++ G
Sbjct: 375 IGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKG 434
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ D KA + + +L G ++ TYN I G C N + ++++ M + G KPD
Sbjct: 435 YCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPD 494
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+Y L+ CK+ ++ L EM G+ N TY+ +IDG + A LLE
Sbjct: 495 EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLE 554
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G ++ I GL ++ A EL K M ++ + P + A++
Sbjct: 555 HMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 143/341 (41%), Gaps = 21/341 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y+ VI L ++ D +++ + + E F + +I + H
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESE-MSPDTFTYTSMILGHCRKHDLDS-------- 268
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
A+++ N M +G + T S +++ +C+ + +E ++EM G
Sbjct: 269 ----------ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV--NEAFDLIREMILHGI 316
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
T I +L DA + MK+ G +P++ YT +++G+ V A
Sbjct: 317 LPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIG 376
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
LF + G+ P+ TYN IN L + ++ ++ M G P+++TYN +++ C
Sbjct: 377 LFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYC 436
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ + + ++ M +G NL TY+ +I G G+ A +L+ + G
Sbjct: 437 ILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E ICG C+ + A L +M D + P + AL+
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 537
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 32/326 (9%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I+++ A + N M++DG C + T + ++ C+ L D ++ MK+ G
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL--DTATSLLEHMKRSGCRPN 564
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I L K+ A + M +GI P++V YT +++G+ A E+F+
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ G +P++ TY+ I L ++ VE + A +E G PD ITY +++A
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG-----------LASKGDIIEACGLLEEA-- 372
++ + M G L TY ++I G LA+ D++ C +
Sbjct: 685 KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744
Query: 373 -------------LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
L+ GL Q + + L G +A ELL M + + P +
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQ--NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAY 802
Query: 420 EALLLS--SVSKLDFVNTSFIRLVDQ 443
+LL S V +D F + Q
Sbjct: 803 NSLLCSLLRVRNVDLAMGVFKHMSTQ 828
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 133/351 (37%), Gaps = 77/351 (21%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+SLL C P + Y+ +I L K+ NF E +L K
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLT----------------KQNNFSGAE----ELCK 589
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ F + V I DG C +G T SL L
Sbjct: 590 VMIEEGIFPNVVTYTAMI--------------------DGLCKNGST-SLALE------- 621
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+M + G ++ Y+++IR+L ++ KV +A + +++ G+ PD + Y
Sbjct: 622 --------MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ I+ A ++ G P ++TY V I GL + + +
Sbjct: 674 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE--------YLLADQR 725
Query: 305 LGSKPDVIT-----YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
L + PDV+ Y T Q V +L EL L++Q + ++ L++
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMS-AKLAELDPG-------LSVQVQNALVSNLSTA 777
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
G EA LL +++GLC ++ +C L + V A+ + K M+ +
Sbjct: 778 GRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%)
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+E + D L GL ++ Y+ + L + A + M G +P+++
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN ++ ALCK + ++K++ + + TY+ MI G K D+ A + +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+G + + I GLC G V +A +L+++M + P A
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 3/156 (1%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
R ++ELLG M G C Y +++ SL++ V A+G+ M + G + +
Sbjct: 779 RWFEANELLG---SMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLN 835
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y ++ + +A F+ +L+ PD V I+GL + + ++ + M
Sbjct: 836 GYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM 895
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
E P Y L + K R + + ++K
Sbjct: 896 ETRRYMPSFHIYTILAREASKKRSWKHVAGCITKVK 931
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 137/287 (47%), Gaps = 3/287 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A+++L M+ G T ++ L S+C+ S E + + +MKK G +
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG--CSSEAVELLGKMKKRGCVPNIQ 343
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+T +I L + K A+G+ ++M +DG+ P V Y ++N + V+ + A +F +
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L G +P TYN I C +++ + + M + GS P+VITYNTL+ CK L
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
N L++ MK G+ + TY+ +I G + G + A L + G+ +
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
I G V AL L +M + P ++ + +++S SK + ++
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYN-VMISGFSKTNSIS 569
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 122/287 (42%), Gaps = 5/287 (1%)
Query: 140 YKIPKFRINRVGF---AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
Y IP + G A+E+L M G + +T + ++S + RD + +G +
Sbjct: 310 YTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGL--SRDGKFEIAIGLYHK 367
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M G V Y +I L + + A I M S G P Y ++ + D
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA +FD++L G P+V TYN I G CKQ N+ ++++ M+ G KPD TY
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ + +L L M GI N TY+ +IDG + + +A L + + G
Sbjct: 488 LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
S ++ I G + + +A +M + + P + + +
Sbjct: 548 NLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 126/277 (45%), Gaps = 4/277 (1%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ RV + +N + G+ + T LI + DL+ D + +M G +
Sbjct: 147 VKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYI----KMLNSGIRPSL 202
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ + +I L KK +V +A I++ + P+ YT ++ G + A +FD
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
++ G P+ TY+ INGLC + +E + M+ M + G +P V TY L +LC
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ EL+ +MK +G V N+QT++ +I GL+ G A GL + L GL + ++
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNA 382
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC G A + K M P + + ++
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 149/368 (40%), Gaps = 30/368 (8%)
Query: 80 PEAYHFVIKTLAENSQFCDISSV--LDHIEKR---ENFETPEFIFIDLIKTYADAHRFQD 134
P Y + I ++ C +V L ++KR N +T F LI + +F+
Sbjct: 305 PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT----FTALISGLSRDGKFEI 360
Query: 135 SVNLFYK------IP-----KFRIN------RVGFAIEILNCMINDGFCVDGKTCSLILS 177
++ L++K +P IN R A I M++ G +T + I+
Sbjct: 361 AIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIK 420
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
C D+ ++ +M K G ++ Y +I K+ + +A+ +L MK +G+
Sbjct: 421 CFCLMGDIQKAMVI--FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL 478
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
KPD YT +++G A LF ++ G+ P+ TY I+G V+ +
Sbjct: 479 KPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALA 538
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M E G+ P TYN ++ K ++ +M +G++ N+ TY+ IDGL
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA--LELLKQMADKDVSPG 415
G A + E + + I GLCQ G A LL ++ P
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658
Query: 416 ARVWEALL 423
+ L+
Sbjct: 659 VDTYTTLV 666
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 103/215 (47%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT++I + + A + ++M DG P+ V Y+ ++NG+ + +A ++ +E++
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P VYTY + + LC ++++ M++ G P++ T+ L+ L + +
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L +M G+V TY+ +I+ L +G A + + L+ G + ++E I
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G ++KA+ + +M SP + L+
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLI 454
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 147/346 (42%), Gaps = 24/346 (6%)
Query: 106 IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRIN 148
I K + + + +LI ++ + + + +LFY + + F +
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+ + M+ G +T ++++S + +S E F +M K G ++
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE--NFCGKMVKQGLLPNVIT 589
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT+ I L + + A I ++M+ P++ Y+ ++ G + QE + E+++ L
Sbjct: 590 YTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYG-LCQEGRAEDAEMYNLLA 648
Query: 269 VL---GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L G P+V TY + GLC + +++ M++ G +P Y LL CK
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + M G L+L Y +I L + I EA + + L K + ++
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWT 768
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+ GL + G L+LL M ++ + + + +L +S LD
Sbjct: 769 VLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY-VMLARELSALD 813
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 123/271 (45%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++N M+ G + T + I+ C+ + +S L + M+ G YT +
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS--ALRILDLMRDGGCKPDEWSYTEL 501
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K K+ A G+ N+M DG+ P+ V YT +++G E A L + + G
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V TYNV I+GL KQNN ++ M E G P+V+TY ++ LCK + E
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +M +G + NL TYS +I L +G + EA L E GL + + I
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
G V A L +M P + L+
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 116/233 (49%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ F+ + + G G+ Y+ ++ L + + ++M S+G++P+++ Y V+N
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + AE + ++ + PD +TY I G C+++++++ +++ M + G +P+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+TY+TL+ LC +N +L++EM GI+ T + I L G +A L
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ NKG + I GLC GL++ A+ L +M+ V P + AL+
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 397
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 154/391 (39%), Gaps = 51/391 (13%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y+ VI L ++ D +++ + + E F + +I + H ++ +F ++
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESE-MSPDTFTYTSMILGHCRKHDLDSALQVFNQM 276
Query: 143 PK-----------FRIN------RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ--- 182
K IN RV A +++ MI G TC+ + ++C+
Sbjct: 277 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 336
Query: 183 --------------------------RDLSSDELL----GFVQEMKKLGFCFGMVDYTNV 212
L LL G M + G V Y +
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I LV+ ++ A +LN M +G P+IV Y ++ G + D KA + + +L G
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
++ TYN I G C N + ++++ M + G KPD +Y L+ CK+ ++
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM G+ N TY+ +IDG + A LLE G ++ I GL
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ A EL K M ++ + P + A++
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 32/326 (9%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I+++ A + N M++DG C + T + ++ C+ L D ++ MK+ G
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL--DTATSLLEHMKRSGCRPN 564
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y +I L K+ A + M +GI P++V YT +++G+ A E+F+
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 624
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ G +P++ TY+ I L ++ VE + A +E G PD ITY +++A
Sbjct: 625 KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 684
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDG-----------LASKGDIIEACGLLEEA-- 372
++ + M G L TY ++I G LA+ D++ C +
Sbjct: 685 KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTD 744
Query: 373 -------------LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
L+ GL Q + + L G +A ELL M + + P +
Sbjct: 745 QDAVSVMSAKLAELDPGLSVQVQ--NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAY 802
Query: 420 EALLLS--SVSKLDFVNTSFIRLVDQ 443
+LL S V +D F + Q
Sbjct: 803 NSLLCSLLRVRNVDLAMGVFKHMSTQ 828
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 133/351 (37%), Gaps = 77/351 (21%)
Query: 65 SSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK 124
+SLL C P + Y+ +I L K+ NF E +L K
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLT----------------KQNNFSGAE----ELCK 589
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ F + V I DG C +G T SL L
Sbjct: 590 VMIEEGIFPNVVTYTAMI--------------------DGLCKNGST-SLALE------- 621
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+M + G ++ Y+++IR+L ++ KV +A + +++ G+ PD + Y
Sbjct: 622 --------MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ I+ A ++ G P ++TY V I GL + + +
Sbjct: 674 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE--------YLLADQR 725
Query: 305 LGSKPDVIT-----YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
L + PDV+ Y T Q V +L EL L++Q + ++ L++
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSA-KLAELDPG-------LSVQVQNALVSNLSTA 777
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
G EA LL +++GLC ++ +C L + V A+ + K M+ +
Sbjct: 778 GRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%)
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+E + D L GL ++ Y+ + L + A + M G +P+++
Sbjct: 158 KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLI 217
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN ++ ALCK + ++K++ + + TY+ MI G K D+ A + +
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+G + + I GLC G V +A +L+++M + P A
Sbjct: 278 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ +A EL ++ GL PD YN + L + NV+ + + M G + + Y
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
L+ ALC++ R + M + + +++IDGL G
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 7/254 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +C++ D+ + G +EMK G V Y ++I K ++ D +
Sbjct: 135 TYNIMIDCMCKEGDIEAAS--GLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFE 192
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MKS +PD++ Y ++N K E F E+ GL P+V +Y+ ++ CK++
Sbjct: 193 EMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKED 252
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ +K M LG P+ TY +L+ A CK+ L+ L EM G+ N+ TY+
Sbjct: 253 MMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYT 312
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+IDGL I EA L + + G+ + + I G + + +ALELL +M +
Sbjct: 313 ALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGR 372
Query: 411 DVSP-----GARVW 419
+ P G +W
Sbjct: 373 GIKPDLLLYGTFIW 386
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 117/236 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ + F +EMK + ++ Y +I K K+ L +MK G+KP++V Y+ +
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTL 244
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ ++ +A + + ++ LGLVP+ +TY ++ CK N+ ++ M ++G
Sbjct: 245 VDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ +V+TY L+ LC V + EL +M G++ NL +Y+ +I G ++ A
Sbjct: 305 EWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALE 364
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL+E +G+ ++ I LC + A ++ +M +K + ++ L+
Sbjct: 365 LLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLM 420
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 154/337 (45%), Gaps = 46/337 (13%)
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
F K+PK +E M G + + S ++ + C++ + + L F +M+
Sbjct: 216 FGKLPK--------GLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQ--QALKFYVDMR 265
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
+LG YT+++ + K + DA + ++M G++ ++V YT +++G+ E
Sbjct: 266 RLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIK 325
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+AEELF +++ G++P++ +Y I+G K N++ ++++ M+ G KPD++ Y T +
Sbjct: 326 EAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFI 385
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYS---------------------------- 350
+LC + ++ + ++ EM+ KGI N Y+
Sbjct: 386 WSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIE 445
Query: 351 -------IMIDGLASKGDIIEACGLLEEALNK-GLCTQSSMFDETICGLCQRGLVRKALE 402
++IDGL + +A N GL ++++ I GLC+ V A
Sbjct: 446 VTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATT 505
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIR 439
L +QMA K + P + +L+ + + + V +R
Sbjct: 506 LFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALR 542
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + T + ++ + C+ +LS + EM ++G + +V YT +I L E++
Sbjct: 268 GLVPNEHTYTSLVDAYCKIGNLS--DAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIK 325
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A + +M + G+ P++ YT +++G + ++ +A EL DE+ G+ PD+ Y +I
Sbjct: 326 EAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFI 385
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA----------------------- 320
LC +EA ++ M+E G K + Y TL+ A
Sbjct: 386 WSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIE 445
Query: 321 ------------LCKVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACG 367
LCK + +++ + + G+ N Y+ MIDGL + + A
Sbjct: 446 VTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATT 505
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
L E+ KGL + + I G ++G V +AL L +MA+ V GAR +
Sbjct: 506 LFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGARFGD 558
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
M G KP + Y ++++ + + D A LF+E+ GL+PD TYN I+G
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYG 179
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K ++ + M+ + +PDVITYNTL+ CK +L + E +EMK G+ N+
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVV 239
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+YS ++D + + +A + GL + + C+ G + A L +M
Sbjct: 240 SYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEM 299
Query: 408 ADKDVSPGARVWEALL 423
+ V + AL+
Sbjct: 300 SQVGVEWNVVTYTALI 315
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 118/219 (53%), Gaps = 4/219 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ +++R+ + +++ + MKS G+ P +V + +L ++ + A++++DE+L
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211
Query: 269 -VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ PD +T+N+ I G C V+ G ++ + G +PDV+TYNTL+ LC+ ++
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271
Query: 328 NRLRELVKEMKWKGIVL--NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+VK M K + L N+ TY+ +I G +K +I +A + EE +N+GL + ++
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331
Query: 386 ETICGLCQRGLVRKALELLKQMA-DKDVSPGARVWEALL 423
I GLC+ K ++L+ A D SP + L+
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLM 370
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 164/408 (40%), Gaps = 68/408 (16%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKREN--FETPEFIFIDLIKTYADAHRFQDSVNL 138
++Y +++ L N + L IEKR + F L++ + A FQ+S+ +
Sbjct: 112 QSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKV 171
Query: 139 FYKIPKFRIN-----------------RVGFAIEILNCMIND-GFCVDGKTCSLILSSVC 180
F + ++ R A ++ + M++ G D T ++++ C
Sbjct: 172 FTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFC 231
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM--KSDGIK 238
+ D+ ++ + G +V Y ++ L + KV A ++ M KS +
Sbjct: 232 MNGMV--DDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLN 289
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ--------- 289
P++V YT ++ G + + KA +F+E++ GL + TYN I GLC+
Sbjct: 290 PNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDI 349
Query: 290 ---------------------------NNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
N++ +K+ M EL +PD TY+ L+++LC
Sbjct: 350 LEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLC 409
Query: 323 KVRELNRLRELVKEMKWKGIVLN-------LQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+ + +L+ ++ + I+L+ + Y+ + L G +A + + +
Sbjct: 410 QGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRR 469
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G S + I G C+ G ELL M KD P +E+L+
Sbjct: 470 GTQDPPS-YKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLI 516
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 142/356 (39%), Gaps = 32/356 (8%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKT 125
+ + S + CEP Y+ ++ L + +V+ + K+ P + + LI+
Sbjct: 242 IFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRG 301
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
Y + ++ +F + M+N G + T + ++ +CE R
Sbjct: 302 YCAKREIEKALAVFEE------------------MVNQGLKANNITYNTLIKGLCEARKF 343
Query: 186 SS--DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D L G + F + ++ + DAL + +M I+PD
Sbjct: 344 EKIKDILEGTAGDGT---FSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSAT 400
Query: 244 YTMVLNGVIVQEDYVKAEELFDELL---VL----GLVPDVYTYNVYINGLCKQNNVEAGI 296
Y+ ++ + Y KAE+L D+LL +L G P V YN LC+ +
Sbjct: 401 YSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAE 460
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K + G++ D +Y TL+ CK EL+ M K + + +TY +I+GL
Sbjct: 461 KAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGL 519
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ A LE+ L SS F + L ++G ++ L++ M DK++
Sbjct: 520 LHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNI 575
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 24/270 (8%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y+ +IK L E +F I +L+ F F L+ + A D++ +F +
Sbjct: 329 TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKL 200
+ + +I D T S ++ S+C+ +++LL + E K L
Sbjct: 389 MSELKIQ------------------PDSATYSALVRSLCQGGHYEKAEDLLDKLLERKIL 430
Query: 201 GFCFG----MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
G + Y + + L + K A Q+ G + D Y ++ G +
Sbjct: 431 LSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGT 489
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ EL +L +PD TY INGL + ++ + M +P+ T+++
Sbjct: 490 FESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHS 549
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNL 346
+L L + + L++ M K I NL
Sbjct: 550 ILAKLLEQGRTSESASLIQLMLDKNIRQNL 579
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 137/278 (49%), Gaps = 5/278 (1%)
Query: 149 RVGFAIEILNCMINDGFCV-DGKTCSLILSSVCEQRDLSSDELLGFVQEM-KKLGFCF-G 205
R A+++L ++D CV + + + ++ S+C D S E L VQ M K+ G C
Sbjct: 206 RTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCG--DSRSQEALDMVQRMAKEGGRCSPD 263
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + VI K+ +V A ++N+M G++PD+V Y +++ + KAE +
Sbjct: 264 VVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLR 323
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ G+ PD TY I+G + + KM M G P ++T+N+ + +LCK
Sbjct: 324 QMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHG 383
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+ + M KG + +L +YSI++ G A++G + L +KG+ F+
Sbjct: 384 RSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFN 443
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I +RG++ +A+ + +M + V P + L+
Sbjct: 444 ILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLI 481
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 163/372 (43%), Gaps = 51/372 (13%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LLH S C P +Y+ VIK+L +S+ + ++ + K +P+ + + +
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV--- 270
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
H F F+ V A ++N M+ G D T + I+ ++C+ R +
Sbjct: 271 --IHGF------------FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMD 316
Query: 187 SDELL--------------------------GFVQEMKKL-------GFCFGMVDYTNVI 213
EL+ G +E K+ G G+V + + +
Sbjct: 317 KAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFM 376
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
SL K + DA I M + G PD+V Y+++L+G + + LF + G+V
Sbjct: 377 SSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIV 436
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
+ + +N+ I+ K+ ++ + + M+ G +PDV+TY+TL+ A C++ L E
Sbjct: 437 ANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEK 496
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC-GLC 392
+M G+ N Y +I G GD+++A L+ E ++KG+ + +F +I LC
Sbjct: 497 FSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLC 556
Query: 393 QRGLVRKALELL 404
G V A ++
Sbjct: 557 NEGRVMDAHDVF 568
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 154/332 (46%), Gaps = 23/332 (6%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
L+ YA RF D NLF+ + I + NC C IL S
Sbjct: 410 LLHGYATEGRFADMNNLFHSMADKGI--------VANCH-----------CFNILISAHA 450
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
+R + + +L F EM+ G +V Y+ +I + + ++ DA+ +QM S G++P+
Sbjct: 451 KRGMMDEAMLVFT-EMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLV-PDVYTYNVYINGLCKQNNVEAGIKMIA 300
V Y +++G + D VKA+EL E++ G+ P++ ++ I+ LC + V +
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFN 569
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ +G +P ++T+N+L+ C V ++ + ++ M GI ++ TY+ ++ G G
Sbjct: 570 LVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSG 629
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
I + L E L+K + + + + GL G A ++ +M D + ++
Sbjct: 630 KIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYK 689
Query: 421 ALLLSSVSKLDFVNTSFIRLVDQILNTPCKME 452
+LL + + D + + I L ++ CK +
Sbjct: 690 -ILLKGLCRNDLTDEA-ITLFHKLGAMDCKFD 719
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ EM + G +V Y +++ +L K + A +L QM G++PD + YT +++G
Sbjct: 286 LINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYS 345
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ ++ ++F ++ GL+P + T+N +++ LCK + ++ M G PD++
Sbjct: 346 CSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLV 405
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
+Y+ LL + L M KGIV N ++I+I A +G + EA + E
Sbjct: 406 SYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM 465
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+G+ + I C+ G + A+E QM + P V+ +L+
Sbjct: 466 QGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLI 516
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 138/325 (42%), Gaps = 22/325 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQDS 135
EP YH +I + ++ + + P +F +I + + R D+
Sbjct: 506 EPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSK-GIPRPNIVFFSSIIHSLCNEGRVMDA 564
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
++F + I N +I DG+C+ GK ++ G +
Sbjct: 565 HDVFNLVIHIGDRPT---IVTFNSLI-DGYCLVGKM----------------EKAFGVLD 604
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
M +G +V Y ++ K K+ D L + +M +KP V Y++VL+G+
Sbjct: 605 AMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAG 664
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A+++F E++ G D+ TY + + GLC+ + + I + + + K D+ N
Sbjct: 665 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 724
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
T++ AL KVR +L + G+V N+ TY +MI L +G + EA +
Sbjct: 725 TVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKS 784
Query: 376 GLCTQSSMFDETICGLCQRGLVRKA 400
G S + ++ I L Q+G + KA
Sbjct: 785 GCAPSSRLLNDIIRMLLQKGDIVKA 809
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 259 KAEELFDELLV----LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK--PDVI 312
+ +E D LL LG VP+ +YN I LC + + + M+ M + G + PDV+
Sbjct: 206 RTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVV 265
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
++NT++ K E+++ L+ EM KG+ ++ TY+ ++D L + +A +L +
Sbjct: 266 SFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQM 325
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++KG+ + I G G +++ ++ ++M K + PG + + + S
Sbjct: 326 VDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSS 378
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM G + Y +++ L + + +A+ + +++ + K DI V+N +
Sbjct: 674 HEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKV 733
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A +LF + GLVP+V TY V I+ L K+ +VE M + ME+ G P
Sbjct: 734 RRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLL 793
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
N +++ L + ++ + + ++ I L T S+++ +SKG
Sbjct: 794 NDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG 839
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 38/186 (20%)
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE--------L 327
V+TY + ++ C+ + G A + G + I NT L+ LC + L
Sbjct: 156 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLL 215
Query: 328 NRLREL----------------------------VKEMKWKG--IVLNLQTYSIMIDGLA 357
+R+ +L V+ M +G ++ +++ +I G
Sbjct: 216 HRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 275
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+G++ +AC L+ E + KG+ ++ + LC+ + KA +L+QM DK V P
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335
Query: 418 VWEALL 423
+ A++
Sbjct: 336 TYTAII 341
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 146/335 (43%), Gaps = 57/335 (17%)
Query: 115 PEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCS 173
P+ + + L+ YA F D + LF N M ++G D + +
Sbjct: 403 PDIVSYCTLLHGYASEGWFADMIGLF------------------NSMKSNGIAADCRVFN 444
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+++ + +R + D +L F EM++ G +V Y+ VI + + ++ DA+ NQM
Sbjct: 445 ILIHAY-AKRGMVDDAMLIFT-EMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV-PDVYTYNVYINGLCKQNNV 292
+ GI+P+ Y ++ G + VKA+EL E++ G+ PD+ +N IN LCK V
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562
Query: 293 -----------------------------------EAGIKMIACMEELGSKPDVITYNTL 317
+ K++ ME +G + D++TY+TL
Sbjct: 563 MDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTL 622
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L K +N L +EM+ KG+ N TY IM+ GL G + A E + G
Sbjct: 623 LDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGT 682
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
S++ + GLC+ +A+ L +++ +V
Sbjct: 683 TVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNV 717
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 4/285 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGK-TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-G 205
NR A+ +L +++ CV + S+IL +C+ +S L F K+ G C
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDN-SMSQRALDLFQMMAKEGGACSPN 264
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y VI K+ + A + ++M G+KPD+V Y ++++ + KAE +
Sbjct: 265 VVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLR 324
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G PD TYN I+G ++ KM M+ G P+++ N+ L +LCK
Sbjct: 325 QMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHG 384
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
E+ M KG ++ +Y ++ G AS+G + GL + G+ +F+
Sbjct: 385 RSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFN 444
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
I +RG+V A+ + +M + VSP V + ++S+ S++
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDV-VTYSTVISAFSRM 488
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 160/391 (40%), Gaps = 51/391 (13%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LLH S C P +Y ++K L +NS + + K +P + + +
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTV--- 271
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
H F F+ G A + + M G D T +LI+ ++C+ R +
Sbjct: 272 --IHGF------------FKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMD 317
Query: 187 SDEL--------------------------LGFVQE-------MKKLGFCFGMVDYTNVI 213
EL LG ++E MK G +V + +
Sbjct: 318 KAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFL 377
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
SL K + +A I + M + G KPDIV Y +L+G + + LF+ + G+
Sbjct: 378 ASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIA 437
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
D +N+ I+ K+ V+ + + M++ G PDV+TY+T++ A ++ L E
Sbjct: 438 ADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEK 497
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFDETICGLC 392
+M +GI N Y +I G G +++A L+ E +NKG+ F+ I LC
Sbjct: 498 FNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLC 557
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V A ++ + D P + +L+
Sbjct: 558 KDGRVMDAHDIFDLVTDIGERPDVITFTSLI 588
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 143/339 (42%), Gaps = 26/339 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQDS 135
+P YH +I+ + ++ + + P+ +F + +I + R D+
Sbjct: 507 QPNTAVYHSIIQGFCMHGGLVKAKELVSEMINK-GIPRPDIVFFNSVINSLCKDGRVMDA 565
Query: 136 VNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++F + R + + F I DG+C+ GK D+
Sbjct: 566 HDIFDLVTDIGERPDVITFTSLI------DGYCLVGKM----------------DKAFKI 603
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ M+ +G +V Y+ ++ K ++ D L + +M+ G+KP+ V Y ++L G+
Sbjct: 604 LDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFR 663
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
V A + F E++ G V Y + + GLC+ N + I + + + K +
Sbjct: 664 AGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITI 723
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
NT++ A+ KV+ +EL + G++ N TY +MI L G + +A +
Sbjct: 724 LNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSME 783
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G+ S + + I L ++G + KA L ++ K +
Sbjct: 784 KSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRI 822
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 80/180 (44%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G + Y ++ L + +A+ + ++ + +K I ++N +
Sbjct: 675 HEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKV 734
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A+ELF + GL+P+ TY V I L K VE M + ME+ G P
Sbjct: 735 QRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLL 794
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N +++ L + E+ + + ++ K I+L T S+M+ + KG E LL N
Sbjct: 795 NRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLLPAKYN 854
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 272 LVP-DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
+VP V+TY++ ++ C+ + G+ + C+ G K IT +TLL+ LC NR
Sbjct: 152 VVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYA---NRT 208
Query: 331 RE----LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE-EALNKGLCTQSSM-F 384
E L+ M G V N+ +YSI++ GL A L + A G C+ + + +
Sbjct: 209 EEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAY 268
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSP 414
+ I G + G KA L +M + V P
Sbjct: 269 NTVIHGFFKEGETGKACSLFHEMTRQGVKP 298
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 7/282 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR--DLSSDELLGFVQEMKKLGF 202
FR +V A+EI N MI G D K C+ ++ +C R DL+ + + +E+K
Sbjct: 160 FRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV---AEEIKSARV 216
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+V Y +I K ++ A + + M G +PD+V Y ++LN +AE
Sbjct: 217 KLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEG 276
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK-MIACMEELGSKPDVITYNTLLQAL 321
+ E++ G+ D Y+YN + C+ ++ + M+ ME G DV++Y+TL++
Sbjct: 277 VMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGF-CDVVSYSTLIETF 335
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ + +L +EM+ KGIV N+ T++ +I +G+ A LL++ GL
Sbjct: 336 CRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + LC+ G V KA + M + +++P A + +L+
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLI 437
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 1/237 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D + EM+ + DY I LVK+ + A I M G Y+
Sbjct: 26 DNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTYSRF 85
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G+ + + + L ++ LG +PD++ +N+Y++ LC++N V ++ CM + G
Sbjct: 86 ISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGR 145
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDV++Y L+ L + ++ E+ M G+ + + + ++ GL + A
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 368 LLEEALNKGLCTQS-SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ E + S +++ I G C+ G + KA L M+ P + LL
Sbjct: 206 MVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLL 262
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 98/199 (49%), Gaps = 2/199 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDEL 267
Y + I +LVK + +A+ + ++M+ + Y + GV+V+E + AE ++ ++
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFI-GVLVKESRFELAEAIYRDM 70
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ +G +TY+ +I+GLCK E ++ ME LG PD+ +N L LC+ ++
Sbjct: 71 MPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKV 130
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ M +G ++ +Y+I+I+GL G + +A + + G+ +
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 388 ICGLCQRGLVRKALELLKQ 406
+ GLC V A E++ +
Sbjct: 191 VVGLCHARKVDLAYEMVAE 209
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 42/248 (16%)
Query: 79 PPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNL 138
P Y F++K + E FCD+ S + LI+T+ A + + L
Sbjct: 306 PDRCYSFMLKEM-EPRGFCDVVS-----------------YSTLIETFCRASNTKKAYKL 347
Query: 139 FYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
F ++ + I N V F SLI + + E + +LL +
Sbjct: 348 FEEMRQKGIVTNVVTFT-------------------SLIKAFLREGNSSVAKKLL---DQ 385
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M +LG + YT ++ L K V A GI N M I PD + Y +++G+
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A +LF+++ PD T+ I GL ++ + A K+ M + G D +T
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDT 505
Query: 317 LLQALCKV 324
L++A C +
Sbjct: 506 LIKASCSM 513
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 167/364 (45%), Gaps = 26/364 (7%)
Query: 57 IPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE 116
I ++ SLLHS+++ C P + + KT A ++ + + +++ F T E
Sbjct: 129 ITTNSNLFESLLHSYTL--CNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVE 186
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+ F S+ L+ K P+ + M + + T ++++
Sbjct: 187 -----------SCNAFLSSM-LYLKRPEL-------VVSFYRQMRRNRISPNVYTINMVV 227
Query: 177 SSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN-QMKS 234
S+ C+ +L+ + E+L ++MK +G C +V + ++I K + AL + + M
Sbjct: 228 SAYCKLGELNKASEVL---EKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGK 284
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+G+ P++V + ++NG + +A +F E+ + + P+V TYN ING + N E
Sbjct: 285 NGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEM 344
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
GI + ME K D++TYN L+ LCK + + +VKE+ +V N T+S +I
Sbjct: 345 GIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIA 404
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G + + A + + G + F C+ A+++L+ M ++ ++P
Sbjct: 405 GQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTP 464
Query: 415 GARV 418
+ +
Sbjct: 465 DSSI 468
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 118/230 (51%), Gaps = 3/230 (1%)
Query: 196 EMKKLGFCFGMVDYTNV-IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+MK+ GF F V+ N + S++ ++ + QM+ + I P++ MV++
Sbjct: 175 KMKEYGF-FPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKL 233
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI-ACMEELGSKPDVIT 313
+ KA E+ +++ +GL P+V T+N I+G C + + +K+ M + G P+V+T
Sbjct: 234 GELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVT 293
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
+NTL+ CK +L+ + EMK + N+ TY+ +I+G G+ GL EE
Sbjct: 294 FNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEME 353
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I GLC+ G +KA ++K++ ++ P A + AL+
Sbjct: 354 RNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALI 403
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 161/359 (44%), Gaps = 16/359 (4%)
Query: 87 IKTLAENSQFCDISSVLDHI-EKRENFETPEFIFIDLIKTYAD-------AHRFQDSVNL 138
++T NS S L HI K NF+T + IF +I T ++ ++ +S L
Sbjct: 92 VQTHNPNSHTLHTHSFLLHILTKNRNFKTAQSIFSKIITTNSNLFESLLHSYTLCNSSPL 151
Query: 139 FYK--IPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL-GFV 194
+ F +N++ A + M GF ++C+ LSS+ L EL+ F
Sbjct: 152 VFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLY---LKRPELVVSFY 208
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M++ + V+ + K ++ A +L +MK G+ P++V + +++G +
Sbjct: 209 RQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDK 268
Query: 255 EDYVKAEELFDELLVL-GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
A ++ D ++ G+ P+V T+N ING CK+ + ++ + M+ P+V+T
Sbjct: 269 GLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVT 328
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNTL+ + L +EM+ + ++ TY+ +I GL +G +A +++E
Sbjct: 329 YNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELD 388
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
L +S F I G C R +A + + M SP + L + DF
Sbjct: 389 KGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDF 447
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 3/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG-FCFGMVDYTN 211
A IL + G + T +L++ C +D +E V+EMK+ G V Y
Sbjct: 272 ARRILESLQRKGLSPNVVTYTLLVKGYC--KDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I ++ ++ DA + N+M+ GI ++ Y ++NG+ + +++ E+ +G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD Y+YN I+G C++ ++ +M M G +TYNTLL+ C + ++
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L M +G+ N + S ++DGL G +A L +E L +GL F+ I GL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G + +A ELL +M + P + + L
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLF 541
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ M+ +G T + +L C + L F+ M K G + + +
Sbjct: 413 AFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL--MLKRGVAPNEISCSTL 470
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K K AL + + + G+ +++ + V+NG+ +AEEL D + L
Sbjct: 471 LDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRC 530
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY +G CK + ++ ME LG P V +N+ + ++ +++ +
Sbjct: 531 PPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVND 590
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM +G+ NL TY +I G +G++ EAC L E +N G+ + +
Sbjct: 591 IHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFY 650
Query: 393 QRGLVRKALELLKQMADKDVSPGARV 418
+ G V +A +L+++ + D+ PG +
Sbjct: 651 KEGKVDEANLVLQKLVNIDMIPGCSI 676
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V + +I L K ++ DA + +++ PD Y+ +++G +A L D
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L GL P++ TYN I GLCK + + + ++ G P+ ITYNTL+ CK +
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+L ++M +GI + TYSI+I GL ++G + EA LL++ + + +
Sbjct: 821 TTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSP 414
I G + G + + +L +M + + P
Sbjct: 881 LIHGYIKSGNMEEISKLYDEMHIRGLLP 908
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 149/346 (43%), Gaps = 28/346 (8%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS---VNL 138
AYH V+ D +L+ ++ R+ + L+K Y R +++ V
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQ-RKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
+ ++ V + + MIN G+C G+ D+ EM+
Sbjct: 314 MKETGDIVVDEVAYGM-----MIN-GYCQRGRM----------------DDATRVRNEMR 351
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
G + Y +I L K ++ + +L +M+ G++PD Y +++G +
Sbjct: 352 DAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMR 411
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
KA E+ ++ GL TYN + G C + ++ +++ M + G P+ I+ +TLL
Sbjct: 412 KAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLL 471
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
L K + + L KE +G+ N+ T++ +I+GL G + EA LL+ + + C
Sbjct: 472 DGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR-MKELRC 530
Query: 379 TQSSMFDETIC-GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
S+ T+ G C+ G + A L+ +M +P ++ + +
Sbjct: 531 PPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 8/303 (2%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
L+ A A RF D+ L +P E+ F + L+L + +
Sbjct: 106 LLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYR-----DFTFSAVSFDLLLRAHAD 160
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
LSS L M K+G + ++ LV+ A + QM+ G+ PD
Sbjct: 161 AGQLSS--ALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDE 218
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
++ +A E +E+ +GL ++ Y+ ++ C E +++
Sbjct: 219 FTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES 278
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG-IVLNLQTYSIMIDGLASKG 360
++ G P+V+TY L++ CK + +VKEMK G IV++ Y +MI+G +G
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG 338
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+ +A + E + G+ +++ I GLC+ G + + ++L++M D + P +
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398
Query: 421 ALL 423
L+
Sbjct: 399 TLI 401
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 147/394 (37%), Gaps = 82/394 (20%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVG 151
R + L+K + H D++ L++ + K F+ +
Sbjct: 422 RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTE 481
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
A+ + + G + T + +++ +C+ R ++ELL MK+L + Y
Sbjct: 482 QALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL---DRMKELRCPPDSLTYR 538
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+ K ++ A ++N+M+ G P + + + G + + + K ++ E+
Sbjct: 539 TLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT----------------Y 314
GL P++ TY I G CK+ N+ + M G P+V
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA 658
Query: 315 NTLLQALCKVR----------ELNRLRELVKEMK----------WKGIVLNL-------- 346
N +LQ L + E++++ +V + W I+ L
Sbjct: 659 NLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIAD 718
Query: 347 -----------------QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
TYS +I G A+ G I EA L + L+ GL ++ I
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIY 778
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G + +A+ L ++ K +SP + L+
Sbjct: 779 GLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 136/332 (40%), Gaps = 67/332 (20%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSS--VCEQRDLSSDELLGFVQEMKKLGFC 203
++ ++G A ++N M + GF + + ++ + +Q +D EM G
Sbjct: 546 KLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVND----IHSEMSARGLS 601
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+V Y +I K+ + +A + +M ++G+ P++ + +++ + +A +
Sbjct: 602 PNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLV 661
Query: 264 FDELLVLGLVPDV--------------------------YTYNVYINGLCK--------- 288
+L+ + ++P +NV I GLCK
Sbjct: 662 LQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKS 721
Query: 289 --------------------------QNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+++ + M G P++ITYN+L+ LC
Sbjct: 722 LFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLC 781
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K +L+R L +++ KGI N TY+ +ID +G EA L ++ + +G+
Sbjct: 782 KSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVI 841
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ I GLC +G + +A++LL QM + +V P
Sbjct: 842 TYSILIYGLCTQGYMEEAIKLLDQMIENNVDP 873
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 127/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + DG D + I+++ C ++ D + V++M+K + + +
Sbjct: 503 AFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNM--DRAICMVKQMQKERYRPTTRTFLPI 560
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + ++ AL I + M+ G P + Y ++ G++ + KA + D++ V G+
Sbjct: 561 IHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGV 620
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +TY + G + E + + + G + DV TY LL++ CK +
Sbjct: 621 GPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALA 680
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ KEM K I N Y+I+IDG A +GD+ EA L+++ +G+ + + C
Sbjct: 681 VTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACC 740
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++KA E++++M + P + + L+
Sbjct: 741 KAGDMQKATEIIQEMEAFGIKPNLKTYTTLI 771
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
+K+ GF ++ Y +I K KV AL I MK GIK ++ Y+M++NG + +D
Sbjct: 440 LKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKD 499
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+ A +F++ GL PDV YN I C +N++ I M+ M++ +P T+
Sbjct: 500 WANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLP 559
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ + E+ R E+ M+ G + + TY+ +I GL K + +A +L++ G
Sbjct: 560 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAG 619
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + + G G KA + + ++ + +EALL S
Sbjct: 620 VGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKS 668
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 112/239 (46%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M++ G + Y +I LV+K K+ A+ IL+QM G+ P+ YT ++ G D
Sbjct: 580 MRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGD 639
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA + F L GL DVYTY + CK +++ + + M + YN
Sbjct: 640 TEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNI 699
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ + ++ +L+++M+ +G++ ++ TY+ ++ GD+ +A +++E G
Sbjct: 700 LIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFG 759
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
+ + I G + + KAL ++M ++ P + L+ S +S+ F +
Sbjct: 760 IKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQS 818
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 2/267 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M G S ++ + RD+ +E L V++MK+ G +V Y+ +
Sbjct: 293 ARQTFESMQARGIEPSSHVYSSLIHAYAVGRDM--EEALHCVRKMKEEGIEMTIVTYSII 350
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ K K A + K + V Y ++ + +AE L E+ V G+
Sbjct: 351 VGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGI 410
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ Y+ ++G N E + + ++E G P VI+Y L+ K+ ++++ +
Sbjct: 411 DAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQ 470
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ K MK GI N++TYS++I+G D A + E+ GL +++ I C
Sbjct: 471 ISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFC 530
Query: 393 QRGLVRKALELLKQMADKDVSPGARVW 419
+ +A+ ++KQM + P R +
Sbjct: 531 GMSNMDRAICMVKQMQKERYRPTTRTF 557
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 130/301 (43%), Gaps = 27/301 (8%)
Query: 94 SQFCDISSVLDHI-----EKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK------I 142
+ FC +S++ I ++E + F+ +I +A A + ++ +F I
Sbjct: 527 TAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCI 586
Query: 143 PKFRI-----------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
P ++ A+ IL+ M G + T + ++ D +++
Sbjct: 587 PTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGD--TEKAF 644
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+ ++ G + Y +++S K ++ AL + +M + I + Y ++++G
Sbjct: 645 QYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGW 704
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ D +A +L ++ G++PD++TY ++N CK +++ ++I ME G KP++
Sbjct: 705 ARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNL 764
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA---CGL 368
TY TL+ + + +EMK + + Y ++ L S+ ++ GL
Sbjct: 765 KTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQSYVYSGL 824
Query: 369 L 369
L
Sbjct: 825 L 825
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 98/237 (41%), Gaps = 18/237 (7%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+Y +++ ++ + A M++ GI+P Y+ +++ V D +A ++
Sbjct: 276 EYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKM 335
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ + TY++ + G K +A +E + +TY +++ A C+ +
Sbjct: 336 KEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNM 395
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG---------DIIEACGLLEEALNKGLC 378
+R LV+EM+ +GI + Y M+DG G D ++ CG ++ G
Sbjct: 396 DRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCL 455
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
I + G V KAL++ K M + + + L+ + D+ N
Sbjct: 456 ---------INLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANA 503
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 74/177 (41%)
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
KP Y +++ + D A + F+ + G+ P + Y+ I+ ++E +
Sbjct: 271 KPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALH 330
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M+E G + ++TY+ ++ K+ + + KE K K LN TY +I
Sbjct: 331 CVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHC 390
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
++ A L+ E +G+ ++ + G G K L + ++ + SP
Sbjct: 391 QTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSP 447
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 155/363 (42%), Gaps = 60/363 (16%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKF-----------------RINRVGFAIEILNCMI 161
+ LIK HR + LF ++ K R + A+++ M+
Sbjct: 169 YTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEML 228
Query: 162 NDG--FCVDGK----TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
ND + ++ K + S+I+ ++C+ R DE +EMK G ++ YT++I
Sbjct: 229 NDSSLYGINFKPVVISYSIIIDALCKDR--REDEARDLFEEMKVQGMTPTVISYTSLIHG 286
Query: 216 -----------------------------------LVKKEKVFDALGILNQMKSDGIKPD 240
L K+ KV +A +L M GI P+
Sbjct: 287 FCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPN 346
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
++ Y ++ G + D A ELF + G PDV Y V ING CK + VE +K+
Sbjct: 347 LLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYN 406
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
M ++G +PDV TY LL L + ++ ++L MK GI +L Y I ++GL G
Sbjct: 407 GMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNG 466
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+ EA L + + + F+ I GLC+ G + A EL +++ +++ P +
Sbjct: 467 CLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYN 526
Query: 421 ALL 423
++
Sbjct: 527 IMI 529
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ L +V + L ++ + G PDIV YT ++ G+ ++ KA LF + LG
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMI------ACMEELGSKPDVITYNTLLQALCKVR 325
P+ TY + GLC+ N+ +K+ + + + KP VI+Y+ ++ ALCK R
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ R+L +EMK +G+ + +Y+ +I G G EA L E +N+G+ F+
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFN 316
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC+ G V +A +LL+ M + + P + +L+
Sbjct: 317 VLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 354
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 129/262 (49%), Gaps = 4/262 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++L MI G + T + ++ C DL+S L FV M G ++ YT +
Sbjct: 331 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL-FV-SMPSKGCEPDVICYTVL 388
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K KV +A+ + N M G +PD+ Y +L G+ A++LF + V G+
Sbjct: 389 INGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGI 448
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D+Y Y +++NGLCK + +++ ++ K D+ +N L+ LCK +L E
Sbjct: 449 PGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWE 508
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGL 391
L +++ + + ++ TY+IMI G +++A +L + + K CT + + I G
Sbjct: 509 LFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA-NILFQKMEKNGCTPDKITYATLIRGF 567
Query: 392 CQRGLVRKALELLKQMADKDVS 413
+ + K +ELL M +DVS
Sbjct: 568 FESKKLEKVVELLHMMVQRDVS 589
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A + M P + +T +L+G+ + Y + L++++ + G+ PD T N+ +N
Sbjct: 80 AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
LC N V G+ ++A + G PD++TY TL++ LC +++ L M+ G
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNK----GLCTQSSMFDETIC--GLCQRGLVR 398
N TY ++ GL G+I A L +E LN G+ + + +I LC+
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRED 259
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+A +L ++M + ++P + +L+
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLI 284
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 4/203 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCF 204
+ ++V A+++ N M+ G D KT +L+ + + + + +L G MK G
Sbjct: 394 KTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV---MKVYGIPG 450
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+ Y + L K +F+A+ + N++KS IK DI C+ +++G+ A ELF
Sbjct: 451 DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELF 510
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++L L PDV TYN+ I+ C+ V + ME+ G PD ITY TL++ +
Sbjct: 511 EKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFES 570
Query: 325 RELNRLRELVKEMKWKGIVLNLQ 347
++L ++ EL+ M + + L++
Sbjct: 571 KKLEKVVELLHMMVQRDVSLDVN 593
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A + F ++ P + ++ ++GL K + + M G PD T N L
Sbjct: 78 TQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNIL 137
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
L LC V + ++ + +G + ++ TY+ +I GL + I +A LL + K
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA-ALLFTRMQKLG 196
Query: 378 CTQSSMFDETIC-GLCQRGLVRKALELLKQMAD 409
CT +++ T+ GLC+ G + AL+L ++M +
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLN 229
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 21/348 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S +P ++ ++K + + D S+ + +E+ F + LI Y
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE-SGFSPDCVTYNTLINGY 428
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A +G A ++ M +D T + IL ++C ++ L
Sbjct: 429 CKA------------------GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL- 469
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+E + +K G+ V Y +I K V AL + ++MK I P V Y
Sbjct: 470 -EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ G+ +A +ELL GL+PD TYN ++G C++ +VE + M E
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KPDV T N LL+ LC L + +L KG ++ TY+ +I L +G + +A
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
LL E K L ++ I L G +R+A E + +M +K P
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V F+ E N I G + T ++++ C + + + F+ M K V Y
Sbjct: 189 VSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFK--DAVEFLNVMGKYNCSPDNVTY 246
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++ +L KK ++ DA +L MKS G+ P+ Y +++ G +A + + +
Sbjct: 247 NTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
L+PDV+TYN+ INGLC + +E K+ ME L PDV++YNTL+ + +++
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+L++EM KG+ N T++IM+ +G + +A + + G ++ I
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426
Query: 390 GLCQRGLVRKALELLKQMADKDV 412
G C+ G + +A + +M K++
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNM 449
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 121/245 (49%), Gaps = 11/245 (4%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTN--------VIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
LLGF+ ++ ++ T+ I + V+ + A I +MK ++P++
Sbjct: 111 LLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNL 170
Query: 242 VCYTMVLNGVI---VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
+ +LN ++ + E F++ + LG+VP+V T+N+ I G C +N + ++
Sbjct: 171 LTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEF 230
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M + PD +TYNT+L ALCK L R+L+ +MK +G++ N TY+I++ G
Sbjct: 231 LNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCK 290
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + EA ++E L ++ I GLC G + +A +L +M + + P
Sbjct: 291 MGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVS 350
Query: 419 WEALL 423
+ L+
Sbjct: 351 YNTLI 355
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 151/357 (42%), Gaps = 21/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ YNC P Y+ ++ L + + D +L ++ R I L+ Y
Sbjct: 230 FLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNI-LVYGY 288
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+++ N ++ M + D T +++++ +C + +
Sbjct: 289 CKMGWLKEAAN------------------VIELMTQNNLLPDVWTYNMLINGLCNEGRI- 329
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+E EM+ L +V Y +I ++ K+ +A +L +M G+KP+ V + +
Sbjct: 330 -EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ + A ++ G PD TYN ING CK N+ + + M
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
K D +T NT+L+ LC+ ++L +L+ + +G ++ +Y +I G G++ A
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E K + + ++ I GLCQ G +A+ L ++ + + P + +L
Sbjct: 509 KLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 2/257 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N+ A+E LN M D T + IL ++C++ L L + +MK G
Sbjct: 222 NKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDL--LMDMKSRGLLPNRN 279
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ K + +A ++ M + + PD+ Y M++NG+ + +A +L DE+
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L L+PDV +YN ING + + + K++ M E G KP+ +T+N +++ CK ++
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKM 399
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + +M+ G + TY+ +I+G G++ EA ++E K + S +
Sbjct: 400 DDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459
Query: 388 ICGLCQRGLVRKALELL 404
+ LC+ + +A +LL
Sbjct: 460 LRTLCREKKLEEAYKLL 476
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 127/266 (47%), Gaps = 2/266 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M GF D T + +++ C+ ++ E + EM + V ++R+L ++
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMG--EAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+K+ +A +L+ + G D V Y ++ G + +A +L+DE+ ++P TY
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N I GLC+ E I + + E G PD TYNT+L C+ ++ + + +M
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
++ T +I++ GL +G + +A L ++KG + ++ I LC+ G +
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646
Query: 400 ALELLKQMADKDVSPGARVWEALLLS 425
A LL +M +K++ P + A++ +
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITA 672
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 7/257 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN----VIRSLVKKEKVFDAL 226
TC+ +L+S+ S + F +E G+V N VI + K DA+
Sbjct: 172 TCNTLLNSLVR---YPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAV 228
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
LN M PD V Y +L+ + + A +L ++ GL+P+ TYN+ + G
Sbjct: 229 EFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGY 288
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK ++ +I M + PDV TYN L+ LC + +L EM+ ++ ++
Sbjct: 289 CKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV 348
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+Y+ +I+G I EA LLEE KG+ + + + C+ G + A + +
Sbjct: 349 VSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITK 408
Query: 407 MADKDVSPGARVWEALL 423
M + SP + L+
Sbjct: 409 MEESGFSPDCVTYNTLI 425
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 40/260 (15%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
NC+I G C GKT ++ + + E+ + G Y ++
Sbjct: 527 NCIIG-GLCQCGKT----------------EQAISKLNELLESGLLPDETTYNTILHGYC 569
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
++ V A N+M + KPD+ ++L G+ ++ KA +LF+ + G D
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTV 629
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYN I LCK+ ++ +++ MEE PD TYN ++ AL + E + +M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 338 KWKGI----VLNLQ-------------------TYSIMIDGLASKGDIIEACGLLEEALN 374
KG VL L YS I L ++G +A + E+
Sbjct: 690 LEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQ 749
Query: 375 KGLCTQSSMFDETICGLCQR 394
KG+ S + + GL +R
Sbjct: 750 KGITVDKSTYINLMDGLIKR 769
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 88/230 (38%), Gaps = 25/230 (10%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI LN ++ G D T + IL C + D+ ++ F +M + F + +
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDV--EKAFQFHNKMVENSFKPDVFTCNIL 599
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+R L + + AL + N S G D V Y ++ + + A L E+ L
Sbjct: 600 LRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD---------------------- 310
PD YTYN I L + + ++ M E G P
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDS 719
Query: 311 -VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
+ Y+ ++ LC + + E K KGI ++ TY ++DGL +
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 3/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG-FCFGMVDYTN 211
A IL + G + T +L++ C +D +E V+EMK+ G V Y
Sbjct: 272 ARRILESLQRKGLSPNVVTYTLLVKGYC--KDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I ++ ++ DA + N+M+ GI ++ Y ++NG+ + +++ E+ +G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD Y+YN I+G C++ ++ +M M G +TYNTLL+ C + ++
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L M +G+ N + S ++DGL G +A L +E L +GL F+ I GL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ G + +A ELL +M + P + + L
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLF 541
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ M+ +G T + +L C + L F+ M K G + + +
Sbjct: 413 AFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL--MLKRGVAPNEISCSTL 470
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K K AL + + + G+ +++ + V+NG+ +AEEL D + L
Sbjct: 471 LDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRC 530
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY +G CK + ++ ME LG P V +N+ + ++ +++ +
Sbjct: 531 PPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVND 590
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM +G+ NL TY +I G +G++ EAC L E +N G+ + +
Sbjct: 591 IHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFY 650
Query: 393 QRGLVRKALELLKQMADKDVSPGARV 418
+ G V +A +L+++ + D+ PG +
Sbjct: 651 KEGKVDEANLVLQKLVNIDMIPGCSI 676
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 149/346 (43%), Gaps = 28/346 (8%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS---VNL 138
AYH V+ D +L+ ++ R+ + L+K Y R +++ V
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQ-RKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
+ ++ V + + MIN G+C G+ D+ EM+
Sbjct: 314 MKETGDIVVDEVAYGM-----MIN-GYCQRGRM----------------DDATRVRNEMR 351
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
G + Y +I L K ++ + +L +M+ G++PD Y +++G +
Sbjct: 352 DAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMR 411
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
KA E+ ++ GL TYN + G C + ++ +++ M + G P+ I+ +TLL
Sbjct: 412 KAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLL 471
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
L K + + L KE +G+ N+ T++ +I+GL G + EA LL+ + + C
Sbjct: 472 DGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR-MKELRC 530
Query: 379 TQSSMFDETIC-GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
S+ T+ G C+ G + A L+ +M +P ++ + +
Sbjct: 531 PPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 8/303 (2%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
L+ A A RF D+ L +P E+ F + L+L + +
Sbjct: 106 LLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYR-----DFTFSAVSFDLLLRAHAD 160
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
LSS L M K+G + ++ LV+ A + QM+ G+ PD
Sbjct: 161 AGQLSS--ALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDE 218
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
++ +A E +E+ +GL ++ Y+ ++ C E +++
Sbjct: 219 FTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES 278
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG-IVLNLQTYSIMIDGLASKG 360
++ G P+V+TY L++ CK + +VKEMK G IV++ Y +MI+G +G
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG 338
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWE 420
+ +A + E + G+ +++ I GLC+ G + + ++L++M D + P +
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398
Query: 421 ALL 423
L+
Sbjct: 399 TLI 401
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 147/394 (37%), Gaps = 82/394 (20%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVG 151
R + L+K + H D++ L++ + K F+ +
Sbjct: 422 RNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTE 481
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
A+ + + G + T + +++ +C+ R ++ELL MK+L + Y
Sbjct: 482 QALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL---DRMKELRCPPDSLTYR 538
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+ K ++ A ++N+M+ G P + + + G + + + K ++ E+
Sbjct: 539 TLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT----------------Y 314
GL P++ TY I G CK+ N+ + M G P+V
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA 658
Query: 315 NTLLQALCKVR----------ELNRLRELVKEMK----------WKGIVLNL-------- 346
N +LQ L + E++++ +V + W I+ L
Sbjct: 659 NLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIAD 718
Query: 347 -----------------QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
TYS +I G A+ G I EA L + L+ GL ++ I
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIY 778
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G + +A+ L ++ K +SP + L+
Sbjct: 779 GLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
V + +++ G+ A+ LF+ L +PD +TY+ I+G +++ +
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M G P++ITYN+L+ LCK +L+R L +++ KGI N TY+ +ID +G
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
EA L ++ + + G + +A++LL QM + +V P
Sbjct: 821 TTEAFKLKQK-------------------MVEEGYMEEAIKLLDQMIENNVDP 854
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 16/187 (8%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V + +I L K ++ DA + +++ PD Y+ +++G +A L D
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK--- 323
+L GL P++ TYN I GLCK + + + ++ G P+ ITYNTL+ CK
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820
Query: 324 VRELNRLRE-------------LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
E +L++ L+ +M + N TY +I G G++ E L +
Sbjct: 821 TTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYD 880
Query: 371 EALNKGL 377
E +GL
Sbjct: 881 EMHIRGL 887
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+++I + +A + + M S G+ P+I+ Y ++ G+ +A LF++L
Sbjct: 738 YSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQ 797
Query: 269 VLGLVPDVYTYNVYINGLCKQNN----------------VEAGIKMIACMEELGSKPDVI 312
G+ P+ TYN I+ CK+ +E IK++ M E P+ I
Sbjct: 798 SKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYI 857
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
TY TL+ K + + +L EM +G++
Sbjct: 858 TYCTLIHGYIKSGNMEEISKLYDEMHIRGLL 888
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 23/191 (12%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRI---NRVGFAIEILNCMINDGFCVDGKTCSLILSS 178
++ T AD + S N+ + + F + R+ A + + N F D T S ++
Sbjct: 687 VVDTIADGN--PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHG 744
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
S DE M G ++ Y ++I L K K+ A+ + N+++S GI
Sbjct: 745 CAASG--SIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS 802
Query: 239 PDIVCYTMVLNGV---------------IVQEDYVK-AEELFDELLVLGLVPDVYTYNVY 282
P+ + Y +++ +V+E Y++ A +L D+++ + P+ TY
Sbjct: 803 PNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTL 862
Query: 283 INGLCKQNNVE 293
I+G K N+E
Sbjct: 863 IHGYIKSGNME 873
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 8/269 (2%)
Query: 140 YKIPKFRINRVGFA---IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
Y I + + GFA E+ M G +D + + C+ ++ L ++E
Sbjct: 585 YSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQL--LEE 642
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
MK G +V Y +VI L K +++ +A + + KS+G++ ++V Y+ +++G
Sbjct: 643 MKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGR 702
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A + +EL+ GL P+VYT+N ++ L K + + M+ L P+ ITY+
Sbjct: 703 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSI 762
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ LC+VR+ N+ +EM+ +G+ N TY+ MI GLA G+I EA L E G
Sbjct: 763 LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLK 405
S+ ++ I GL R+A+E K
Sbjct: 823 GVPDSASYNAIIEGL---SYSRRAMEAYK 848
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 1/232 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT++I+S K + D I +M G PD+ ++ V + K LF+E
Sbjct: 513 VVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEE 572
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G +PDV +Y++ I+GL K ++ M+E G D YNT + CK +
Sbjct: 573 IKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGK 632
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+N+ +L++EMK KG + TY +IDGLA + EA L EEA + GL ++
Sbjct: 633 VNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSS 692
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
I G + G + +A +++++ K ++P W LL ++ K + +N + +
Sbjct: 693 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC-LLDALVKAEEINEALV 743
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 111/212 (52%), Gaps = 1/212 (0%)
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ ++KS G PD++ Y+++++G++ + ELF + G V D + YN +I+G
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGF 627
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK V +++ M+ G +P V+TY +++ L K+ L+ L +E K G+ LN+
Sbjct: 628 CKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNV 687
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
YS +IDG G I EA ++EE + KGL ++ + L + + +AL +
Sbjct: 688 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQN 747
Query: 407 MADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
M + +P + ++L++ + ++ N +F+
Sbjct: 748 MKNLKGTPN-HITYSILINGLCRVRKFNKAFV 778
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 160/384 (41%), Gaps = 23/384 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
H + P Y +I L + ++ + + + +E+ N + + +I Y
Sbjct: 290 FFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA-YAYNTMIMGY 348
Query: 127 ADAHRFQDSVNLFYK------IPKF-----------RINRVGFAIEILNCMINDGFCVDG 169
A +F ++ +L + IP + R+G A+ M D +
Sbjct: 349 GSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNL 407
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T ++++ +C+ ++ + MK+ G ++ +I L K +K+ +A I
Sbjct: 408 STYNVLIDMLCKAGEVEA--AFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIF 465
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M PD V + +++G+ Q A L++++L +P+ Y I K
Sbjct: 466 EGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKC 525
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
E G K+ M G PD+ N + + K E + R L +E+K +G + ++ +Y
Sbjct: 526 GRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSY 585
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
SI+I GL G E L +G + ++ I G C+ G V KA +LL++M
Sbjct: 586 SILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKT 645
Query: 410 KDVSPGARVWEALL--LSSVSKLD 431
K P + +++ L+ + +LD
Sbjct: 646 KGRQPTVVTYGSVIDGLAKIDRLD 669
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 152/368 (41%), Gaps = 26/368 (7%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C P + +I L + + D + + + + ++ LIK++ R +D
Sbjct: 473 CSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNA-VVYTSLIKSFFKCGRKEDG 531
Query: 136 VNLFYKI------PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDE 189
+F ++ P R+ ++C+ G G+ + S D+ S
Sbjct: 532 HKIFKEMIHRGCSPDLRLLNA-----YMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYS 586
Query: 190 LL-------GFVQE-------MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+L GF +E MK+ G Y I K KV A +L +MK+
Sbjct: 587 ILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTK 646
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G +P +V Y V++G+ + +A LF+E GL +V Y+ I+G K ++
Sbjct: 647 GRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEA 706
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ + + G P+V T+N LL AL K E+N + MK N TYSI+I+G
Sbjct: 707 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILING 766
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L +A +E +GL + + I GL + G + +A L ++ P
Sbjct: 767 LCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPD 826
Query: 416 ARVWEALL 423
+ + A++
Sbjct: 827 SASYNAII 834
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 5/270 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
+IL M GF KTC ++ S + L E +Q M+K F YT +I
Sbjct: 149 QILGEMSIAGFGPSTKTCIELILSCIKSNKLR--EGFDLIQCMRKFKFRPAFSAYTTLIG 206
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-ELFDELLVLGLV 273
+L ++ L + +QM+ G + + +T V+ V +E + A L DE+ L
Sbjct: 207 ALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIR-VFAREGRLDAALSLLDEMKSNCLH 265
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
D+ YNV I+ K V+ K ++ G PD +TY +++ LCK L+ E+
Sbjct: 266 ADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEI 325
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
++M+ V Y+ MI G S G EA LLE +G ++ + L +
Sbjct: 326 FEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGK 385
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
+G + +AL ++M KD +P + L+
Sbjct: 386 KGRLGEALRTFEEM-KKDAAPNLSTYNVLI 414
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 82/169 (48%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++E+ + G + + ++ +LVK E++ +AL MK+ P+ + Y+++
Sbjct: 704 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSIL 763
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ + KA + E+ GL P+ TY I GL K N+ + + G
Sbjct: 764 INGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGG 823
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
PD +YN +++ L R ++ +E + KG ++ +T ++D L
Sbjct: 824 VPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDAL 872
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
V+ DY E++ E+ + G P T I K N + G +I CM + +P
Sbjct: 142 VKFDYF--EQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFS 199
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
Y TL+ AL V+E + + L +M+ G +++ ++ +I A +G + A LL+E
Sbjct: 200 AYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEM 259
Query: 373 LNKGLCTQSSMFDETICGLC--QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVS 428
K C + + +C C + G V A + ++ + P + +++ L +
Sbjct: 260 --KSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGN 317
Query: 429 KLDFVNTSFIRLVDQILNTPC 449
+LD F ++ +Q N PC
Sbjct: 318 RLDEAVEIFEQM-EQNRNVPC 337
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S++++ +C R ++ F QEM+K G + YT +I L K + +A +
Sbjct: 759 TYSILINGLCRVRKF--NKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFE 816
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ K++G PD Y ++ G+ ++A ++F+E + G T ++ L K
Sbjct: 817 RFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDE 876
Query: 291 NVEAGIKMIACMEELG 306
+E + A + E+
Sbjct: 877 CLEQAAIVGAVLREIA 892
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 4/240 (1%)
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+S++ LG + EMK G + Y +I+ L K+ +A +L +M G++P+ + YT
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++ +A + ++L G P+V TY I+GLCK +++ I M +L
Sbjct: 473 TMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDL 532
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P+V Y L+ LCK LN +L EM KG+ L+ Y+ ++DG +G++ +A
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 366 CGLLEEALNKGLCTQSSMFDET--ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L + ++ GL Q +F T I G C ++ +A E+ +M ++P V+ L+
Sbjct: 593 FALKAKMIDSGL--QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 20/316 (6%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCV 167
KRE F + + ++++ LF + R+ + C+I DG C
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLF---AQMRVRGMALNEFTYTCLI-DGTCK 340
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
G+ D+ + + EM + G +V YT ++ L K+ KV +A
Sbjct: 341 AGRL----------------DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAED 384
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L M+ G++ + + YT +++G + ++ KA L E+ GL D+ Y I GLC
Sbjct: 385 VLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLC 444
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ ++ ++ M+E G +P+ I Y T++ A K ++ +++++ G N+
Sbjct: 445 NVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVI 504
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY +IDGL G I EA + + GL + + GLC+ G + +A++L +M
Sbjct: 505 TYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEM 564
Query: 408 ADKDVSPGARVWEALL 423
K +S V+ ALL
Sbjct: 565 VHKGMSLDKVVYTALL 580
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 137/297 (46%), Gaps = 7/297 (2%)
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
AD + +N F K + FA M +G + T S + + C++ +
Sbjct: 256 ADVVTYNALINCFCKFGRMETAYGYFA-----AMKREGVMANVVTFSTFVDAFCKEGLVR 310
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
E + +M+ G YT +I K ++ DA+ +L++M G+ ++V YT+
Sbjct: 311 --EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ + +AE++ + G+ + Y I+G N E + +++ M+ G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+ D+ Y L+Q LC V +L+ + L+ +M G+ N Y+ M+D G + EA
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L++ L+ G + I GLC+ G + +A+ +M D + P + + AL+
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 132/264 (50%), Gaps = 2/264 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ R+ AI +L+ M+ G ++ T ++++ +C++R ++ E ++ M+K G
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAE--DVLRMMEKAGVRAN 397
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ YT +I + ALG+L++MK+ G++ DI Y ++ G+ +A+ L
Sbjct: 398 ELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLT 457
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ GL P+ Y ++ K V I M+ + + G +P+VITY L+ LCK
Sbjct: 458 KMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAG 517
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +M+ G+ N+Q Y+ ++DGL G + EA L E ++KG+ ++
Sbjct: 518 SIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYT 577
Query: 386 ETICGLCQRGLVRKALELLKQMAD 409
+ G ++G + A L +M D
Sbjct: 578 ALLDGYLKQGNLHDAFALKAKMID 601
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 118/236 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE+ V+EM++ G +V Y +I K ++ A G MK +G+ ++V ++
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++ + +A +LF ++ V G+ + +TY I+G CK ++ I ++ M G
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+V+TY L+ LCK R++ ++++ M+ G+ N Y+ +I G + +A G
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL E NKGL S++ I GLC + +A LL +M + + P ++ ++
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 108/212 (50%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
VI L K+ ++ +A + ++MK G PD+V + +++G + + E+L +E+ G
Sbjct: 194 VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
DV TYN IN CK +E A M+ G +V+T++T + A CK +
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L +M+ +G+ LN TY+ +IDG G + +A LL+E + +G+ + + GL
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ V +A ++L+ M V ++ L+
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANELLYTTLI 405
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P++ + +V++ + + + +A LF + +G +PDV T+N I+G K ++ ++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M G K DV+TYN L+ CK + MK +G++ N+ T+S +D
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+G + EA L + +G+ + I G C+ G + A+ LL +M + V
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 118/255 (46%), Gaps = 2/255 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ +L+ M N G +D ++ +C L DE + +M + G + YT +
Sbjct: 417 ALGLLSEMKNKGLELDISLYGALIQGLCNVHKL--DEAKSLLTKMDESGLEPNYIIYTTM 474
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K KV +A+ +L ++ G +P+++ Y +++G+ +A F+++ LGL
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V Y ++GLCK + +++ M G D + Y LL K L+
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 594
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +M G+ L+L Y+ I G + + EA + E + G+ ++++ I
Sbjct: 595 LKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQ 654
Query: 393 QRGLVRKALELLKQM 407
+ G + +A+ L +M
Sbjct: 655 KLGNLEEAISLQDEM 669
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 19/248 (7%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRV 150
K + E ++ LI+ + H+ ++ +L K+ + F+ +V
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
AI +L +++ GF + T ++ +C+ S DE + +M+ LG + YT
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAG--SIDEAISHFNKMRDLGLDPNVQAYT 542
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++ L K + +A+ + N+M G+ D V YT +L+G + Q + A L +++
Sbjct: 543 ALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL D++ Y +I+G C N + ++ + M G PD YN L+ K+ L
Sbjct: 603 GLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEA 662
Query: 331 RELVKEMK 338
L EM+
Sbjct: 663 ISLQDEME 670
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 22/176 (12%)
Query: 151 GFAIEILN-CMINDGFCVDGKTCSLILSSVCEQRDLSSD--------------------E 189
GF ++ C + DG C G I S + RDL D E
Sbjct: 498 GFQPNVITYCALIDGLCKAGSIDEAI-SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNE 556
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+ EM G V YT ++ +K+ + DA + +M G++ D+ CYT ++
Sbjct: 557 AVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFIS 616
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
G +A E+F E++ G+ PD YN I+ K N+E I + ME +
Sbjct: 617 GFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERV 672
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 5/306 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + GFA +L M+ GF + +++L +C R+L + + ++EM++
Sbjct: 119 QMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC--RNLECGKAVSLLREMRRNSLMPD 176
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y VIR + +++ AL + N+MK G +V + ++++ +A
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +GL D+ Y I G C ++ G + + E G P ITYNTL++ CK+
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L E+ + M +G+ N+ TY+ +IDGL G EA L + K + ++
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYN 356
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS---FIRLVD 442
I LC+ GLV A+E+++ M + P + LL +K D S ++ L D
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 443 QILNTP 448
P
Sbjct: 417 SSYTDP 422
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 112/231 (48%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F ++M + V + ++ V+ K A G+L M G ++ + ++L G+
Sbjct: 94 FYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC 153
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ KA L E+ L+PDV++YN I G C+ +E +++ M+ G ++
Sbjct: 154 RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+ L+ A CK +++ +KEMK+ G+ +L Y+ +I G G++ L +E
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +G + ++ I G C+ G +++A E+ + M ++ V P + L+
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A+EI+ M D T +++L +C + DL L ++ ++ Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L K+ ++ AL I + + D V ++LN + D KA EL+ ++
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+V + TY I+G CK + ++ M +P V YN LL +LCK L++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L +EM+ ++ +++IMIDG GDI A LL GL + + I
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ G + +A+ +M D P A + +++L +S+
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
DY ++ SL K+ + A + +M+ D PD+V + ++++G + D AE L +
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GL PD++TY+ IN K ++ I M + G +PD +++L+ E
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMID 354
++L ELVK++ K IVL+ + ++D
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMD 677
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 114/265 (43%), Gaps = 37/265 (13%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A++I + ++ D T +++L+S + D+ ++ + +++
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV--NKAMELWKQISDSKIVRNSD 495
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K + A G+L +M+ ++P + Y +L+ + + +A LF+E+
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PDV ++N+ I+G K ++++ ++ M G PD+ TY+ L +
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL---------I 606
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
NR +L G + EA ++ ++ G + + D
Sbjct: 607 NRFLKL--------------------------GYLDEAISFFDKMVDSGFEPDAHICDSV 640
Query: 388 ICGLCQRGLVRKALELLKQMADKDV 412
+ +G K EL+K++ DKD+
Sbjct: 641 LKYCISQGETDKLTELVKKLVDKDI 665
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 57/138 (41%)
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
L + N E M E + + ++ + LL+ ++R+ ++ M +G N
Sbjct: 82 LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFN 141
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ ++I++ GL + +A LL E L ++ I G C+ + KALEL
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 406 QMADKDVSPGARVWEALL 423
+M S W L+
Sbjct: 202 EMKGSGCSWSLVTWGILI 219
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI +G D TCS IL C L+ +L +EM ++G V Y +I SL K
Sbjct: 1 MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVL--FREMYEMGLDPNHVSYATIINSLFKS 58
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A + +QM GI DIV T V++G+ +AEE+F+ +L L L P+ TY
Sbjct: 59 GRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTY 118
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ++G CK +E ++ ME+ P+VIT+++++ K L++ ++++EM
Sbjct: 119 SALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQ 178
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ ++ N Y+I+IDG G+ A +E ++ L + +FD + L + G + +
Sbjct: 179 RNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDE 238
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A L+ M K + P + +L+
Sbjct: 239 ARSLIIDMYSKGIDPDIVNYASLI 262
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 24/257 (9%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK--------------------VFDALGILN 230
L VQEMK+ F +V Y +I+ L++ K DAL ILN
Sbjct: 275 LSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILN 334
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MKS GI P+ V Y +++ G+ KAE DE+LV+ VP T+ + +
Sbjct: 335 EMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSE 394
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ +++ + G + + YNTL+ C++ + + ++ EM +GI +L TY+
Sbjct: 395 KADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYN 454
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL----VRKALELLKQ 406
+I G + + +A + G+ + ++ + GL GL + + +L+ +
Sbjct: 455 ALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSE 514
Query: 407 MADKDVSPGARVWEALL 423
M ++ + P A ++ L+
Sbjct: 515 MNERGLVPNAATYDILV 531
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 6/274 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++ILN M + G + T ++++ +C+ + E + EM + F + + +
Sbjct: 329 ALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAE--SALDEMLVMEFVPTPITHKFL 386
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+++ + EK L I ++ + G++ + Y ++ KA+ + DE++ G+
Sbjct: 387 VKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGI 446
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV----RELN 328
D+ TYN I G C ++VE +K + M G P++ TYNTLL L +
Sbjct: 447 SADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMME 506
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+LV EM +G+V N TY I++ G G+ + L E + KG ++ I
Sbjct: 507 ETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLI 566
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ G + +A ELL + K P + ++ L
Sbjct: 567 SDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 600
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 36/357 (10%)
Query: 102 VLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNC 159
VL +EK E+ F +I YA +V++ ++ + + N + +AI I
Sbjct: 137 VLQKMEK-EHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGY 195
Query: 160 M------INDGFCVDGKTCSLILSSVC-------EQRDLSSDELLGFVQEMKKLGFCFGM 206
+ D FC + K+ L S+V +R DE + +M G +
Sbjct: 196 FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDI 255
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY--------- 257
V+Y ++I K+ AL I+ +MK I+ D+V Y ++ G++ Y
Sbjct: 256 VNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRM 315
Query: 258 --------VKAEELFD---ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
K E+ D E+ G++P+ TYN+ I GLCK VE + M +
Sbjct: 316 IELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME 375
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P IT+ L++A + + +++ ++ +++ G+ L+L Y+ +I G +A
Sbjct: 376 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK 435
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L+E + +G+ ++ I G C V KAL+ QM ++P + LL
Sbjct: 436 VVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLL 492
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 4/213 (1%)
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
R +D++L +++ G + Y +I + A +L++M GI D+
Sbjct: 391 SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADL 450
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN----NVEAGIK 297
V Y ++ G KA + + ++ V G+ P++ TYN + GL +E K
Sbjct: 451 VTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEK 510
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+++ M E G P+ TY+ L+ +V + L EM KG V L+TY+++I A
Sbjct: 511 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 570
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
G +IEA LL + L KG S +D CG
Sbjct: 571 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 603
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT++I++ K + D I +M G PD++ ++ V + K LF+
Sbjct: 517 VVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFE 576
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GLVPDV +Y++ I+GL K K+ M+E G DV+ YNT++ CK
Sbjct: 577 EIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSG 636
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++++ +L++EMK KG+ + TY ++DGLA + EA L EEA + G+ ++
Sbjct: 637 KVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYS 696
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G + +A +L+++ K ++P + W LL
Sbjct: 697 SLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLL 734
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 116/223 (52%), Gaps = 1/223 (0%)
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+ K +V + ++K+ G+ PD+ Y+++++G++ + +LF E+ GL D
Sbjct: 562 VFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLD 621
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V YN I+G CK V+ +++ M+ G +P V+TY +++ L K+ L+ L +
Sbjct: 622 VLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFE 681
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
E K G+ LN+ YS +IDG G I EA +LEE + KGL S ++ + L +
Sbjct: 682 EAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAE 741
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
+ +A + M + SP A + +++++ + + N +F+
Sbjct: 742 EIDEAQVCFQNMKNLKCSPNAMTY-SIMINGLCMIRKFNKAFV 783
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 138/301 (45%), Gaps = 16/301 (5%)
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ---R 183
A+ H F V +F R R+ A+ +L+ M ++ F D L+L +VC +
Sbjct: 236 ANVHLFTTLVRVFA-----REGRIDAALSLLDEMKSNSFTAD-----LVLYNVCIDCFGK 285
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D F EMK G V YT +I L K ++ +A+ + ++ + P +
Sbjct: 286 VGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYA 345
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y ++ G + +A L + G +P V YN + L ++ VE +++ M
Sbjct: 346 YNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR 405
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ + P++ TYN L+ LCK EL ++ MK G+ N+ T +IMID L +
Sbjct: 406 Q-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLD 464
Query: 364 EACGLLEEALNKGLCT-QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
EAC + L+ +C+ S F I GL +RG V A L ++M D D P V+ +L
Sbjct: 465 EACSIF-LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSL 523
Query: 423 L 423
+
Sbjct: 524 I 524
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 2/245 (0%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S E EMK+ G ++ Y VI K KV A +L +MK+ G++P +V Y
Sbjct: 603 SRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGS 662
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
V++G+ + +A LF+E +G+ +V Y+ I+G K ++ ++ + + G
Sbjct: 663 VVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 722
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+ T+N LL AL K E++ + + MK N TYSIMI+GL +A
Sbjct: 723 LTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAF 782
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--L 424
+E +GL + + I GL + G V +A L + P + + A++ L
Sbjct: 783 VFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGL 842
Query: 425 SSVSK 429
SS +K
Sbjct: 843 SSANK 847
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 5/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + + +IL M GF + +++S + L E G ++ M+K F
Sbjct: 145 RTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLK--EAFGVIEMMRKFKFRPA 202
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE-ELF 264
YT +I +L + L + +QM+ G + ++ +T ++ V +E + A L
Sbjct: 203 FSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVR-VFAREGRIDAALSLL 261
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
DE+ D+ YNV I+ K V+ K M+ G PD +TY TL+ LCK
Sbjct: 262 DEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKA 321
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R L+ EL +E+ V + Y+ MI G S G EA LLE KG +
Sbjct: 322 RRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAY 381
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + L ++G V +AL + +M +D +P + L+
Sbjct: 382 NCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILI 419
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 22/334 (6%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYK------IPKF-----------RINRVGFAIEILNC 159
+ + +I Y A +F ++ +L + IP R +V A+ I +
Sbjct: 344 YAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDE 403
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M D + T ++++ +C+ +L + L MK+ G ++ +I L K
Sbjct: 404 MRQDA-APNLTTYNILIDMLCKAGELEA--ALKVQDTMKEAGLFPNIMTVNIMIDRLCKA 460
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+K+ +A I + PD + +++G+ + A L++++L +P+V Y
Sbjct: 461 QKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVY 520
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I K E G K+ M G PD++ N+ + + K E+ + R L +E+K
Sbjct: 521 TSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKA 580
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+V ++++YSI+I GL G E L E +GL ++ I G C+ G V K
Sbjct: 581 QGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDK 640
Query: 400 ALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
A +LL++M K + P + +++ L+ + +LD
Sbjct: 641 AYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLD 674
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 153/358 (42%), Gaps = 21/358 (5%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
+ P AY +I L+ ++ D L H + +E +F L++ +A R
Sbjct: 197 FKFRPAFSAYTTLIGALSAANR-PDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255
Query: 134 DSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
+++L ++ ++ +V A + + M G D T + ++
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI 315
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+C+ R L DE + +E+ + Y +I K +A +L + K G
Sbjct: 316 GVLCKARRL--DEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
P ++ Y +L + + +A + DE+ P++ TYN+ I+ LCK +EA +
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAPNLTTYNILIDMLCKAGELEAAL 432
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
K+ M+E G P+++T N ++ LCK ++L+ + + K + +T+ +IDGL
Sbjct: 433 KVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGL 492
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+G + +A L E+ L+ ++ I + G ++ K+M + SP
Sbjct: 493 GRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP 550
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE +E K +G +V Y+++I K ++ +A IL ++ G+ P+ + +
Sbjct: 674 DEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCL 733
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+ ++ E+ +A+ F + L P+ TY++ INGLC M++ G
Sbjct: 734 LDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGL 793
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
KP+ ITY T++ L K + R L K G V + Y+ MI+GL+S ++A
Sbjct: 794 KPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYI 853
Query: 368 LLEEALNKG 376
+ EE KG
Sbjct: 854 VFEETRLKG 862
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+E+K G + Y+ +I LVK + + +MK G+ D++ Y V++G
Sbjct: 576 EEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKS 635
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
KA +L +E+ GL P V TY ++GL K + ++ + + +G +V+ Y
Sbjct: 636 GKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIY 695
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
++L+ KV ++ +++E+ KG+ N T++ ++D L +I EA + N
Sbjct: 696 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKN 755
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + I GLC KA ++M + + P + ++
Sbjct: 756 LKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMI 804
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 1/195 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE ++E+ + G + ++ +LVK E++ +A MK+ P+ + Y+++
Sbjct: 709 DEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIM 768
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ + + KA + E+ GL P+ TY I GL K NV + + G
Sbjct: 769 INGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGG 828
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD YN +++ L + + +E + KG +N +T +++D L K D +E
Sbjct: 829 VPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL-HKADCLEQAA 887
Query: 368 LLEEALNKGLCTQSS 382
++ L + +Q +
Sbjct: 888 IVGAVLREMAKSQHA 902
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S++++ +C R ++ F QEM+K G + YT +I L K V +A G+ +
Sbjct: 764 TYSIMINGLCMIRKF--NKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFD 821
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ K+ G PD CY ++ G+ + A +F+E + G + T V ++ L K +
Sbjct: 822 RFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKAD 881
Query: 291 NVEAGIKMIACMEELG 306
+E + A + E+
Sbjct: 882 CLEQAAIVGAVLREMA 897
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 157/346 (45%), Gaps = 25/346 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHI--EKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
++ +I A F + VLD + EKR E F+ + K Y AH + +V LF
Sbjct: 62 TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEK---CFVVIFKAYGKAHLPEKAVGLF 118
Query: 140 YKIP-KFRINRVGFAI-EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
++ +F R + +LN +I +G R L E V
Sbjct: 119 DRMAYEFECKRTVKSFNSVLNVIIQEGLFY---------------RAL---EFYNHVIGA 160
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
K + ++ + VI+++ K V DA+ + M +PD+ Y +++G+ +
Sbjct: 161 KGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRI 220
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A L DE+ + G P T+NV INGLCK+ ++ K++ M G P+ +TYNTL
Sbjct: 221 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTL 280
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ LC +L + L+ M V N+ TY +I+GL +G ++ +L +G
Sbjct: 281 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGY 340
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GL + G ++A++L K+M K+ V+ A++
Sbjct: 341 HVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVI 386
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 145/352 (41%), Gaps = 22/352 (6%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHI--EKRENFETPEFIFIDLIKTYADAHR 131
+ C+ ++++ V+ + + F +H+ K N F +IKT
Sbjct: 125 FECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGL 184
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
D+V +F +P + + C + DG C + DE +
Sbjct: 185 VDDAVQMFRDMPVSKCQPDVYTY----CTLMDGLCKADRI----------------DEAV 224
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+ EM+ G V + +I L KK + +++ M G P+ V Y +++G+
Sbjct: 225 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGL 284
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
++ KA L D ++ VP+V TY INGL KQ G +++A MEE G +
Sbjct: 285 CLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNE 344
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
Y+ L+ L K + +L KEM K LN YS +IDGL G EA +L E
Sbjct: 345 YVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSE 404
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
N + + + G + G KA+E+ K MA + + + L+
Sbjct: 405 MTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLI 456
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 30/279 (10%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C P Y +I L + + D + VL +E+R + E+++ LI
Sbjct: 295 SLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEER-GYHVNEYVYSALISG 353
Query: 126 YADAHRFQDSVNLFYK--IPKFRINRVGFAIEILNCMINDGFCVDGK------TCSLILS 177
+ Q+++ LF + + + +N + ++ I DG C DGK S + +
Sbjct: 354 LFKEGKSQEAMQLFKEMTVKECELNTIVYSAVI------DGLCRDGKPDEALEVLSEMTN 407
Query: 178 SVCEQRDLSSDELL-GFVQ------------EMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
+ C+ + L+ GF + +M K F V Y+ +I L K KV +
Sbjct: 408 NRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKE 467
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL--GLVPDVYTYNVY 282
A+ + QM G KPD+V Y ++NG+ A +L++E+L PDV TYN+
Sbjct: 468 AMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNIL 527
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+N LCKQ+++ I ++ M + G PD++T L+ L
Sbjct: 528 LNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL 566
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 156/390 (40%), Gaps = 64/390 (16%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL I C P P ++ +I L + ++ ++D
Sbjct: 225 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVD--------------------- 263
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
N+F K N V + N +I+ G C+ GK
Sbjct: 264 -----------NMFLK--GCAPNEVTY-----NTLIH-GLCLKGKL-------------- 290
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
++ + + M +V Y +I LVK+ + D +L M+ G + Y+
Sbjct: 291 --EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYS 348
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+++G+ + +A +LF E+ V + Y+ I+GLC+ + +++++ M
Sbjct: 349 ALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNN 408
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
KP+ TY++L++ + ++ E+ K+M N YS++I GL G + EA
Sbjct: 409 RCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 468
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM--ADKDVSPGARVWEALL 423
+ + L KG + I GL GLV AL+L +M + D P + LL
Sbjct: 469 MMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILL 528
Query: 424 -----LSSVSK-LDFVNTSFIRLVDQILNT 447
SS+S+ +D +N+ R D L T
Sbjct: 529 NALCKQSSISRAIDLLNSMLDRGCDPDLVT 558
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 129/259 (49%), Gaps = 3/259 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
++++ +I + T +L++ + C + L+ + L + M+ G V Y +
Sbjct: 192 SLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA--DALATLSTMQGFGLSPDAVTYNTL 249
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + +K + +A +L +MK DGI P Y +++ +A ++ + + G
Sbjct: 250 LNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGF 309
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK-PDVITYNTLLQALCKVRELNRLR 331
PD+ TYNV GLC+ V+ ++ ME L + PDV+TYNTL+ A K R +
Sbjct: 310 EPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDAL 369
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L++EM+ KG+ L T++I++ L +G + EA G LE+ +GL ++ I
Sbjct: 370 RLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAY 429
Query: 392 CQRGLVRKALELLKQMADK 410
C+ G V KA L+ +M K
Sbjct: 430 CKAGNVAKAFTLMDEMVGK 448
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 132/265 (49%), Gaps = 4/265 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKLGFCF 204
+ V A +++ M+ G +D T + +L ++C+ +R ++ELL + GF
Sbjct: 431 KAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELL---HSPPQRGFVP 487
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
V Y V+ + K+ AL + +QM + P I Y ++ G+ E +A +
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+EL+ GLVPD TYN+ I+ CK+ ++E + M E KPDV+T NTL+ LC
Sbjct: 548 NELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+L++ +L + KG +++ TY+ +I + GD+ A ++ KGL + +
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667
Query: 385 DETICGLCQRGLVRKALELLKQMAD 409
+ + L + G +A +L ++AD
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLAD 692
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 140/295 (47%), Gaps = 11/295 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF- 204
R+ + A +++ M GF D +T +++ +C+ + DE EM++L
Sbjct: 290 RLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKV--DEAFRLKDEMERLSTALP 347
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI----VQEDYVKA 260
+V Y ++ + K DAL +L +M+ G+KP +V + +V+ + ++E K
Sbjct: 348 DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKL 407
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
E++ +E GL PDV TYN I+ CK NV ++ M G K D T NT+L
Sbjct: 408 EKIAEE----GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LCK++ EL+ +G V + +Y ++ + + A L ++ + + L
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
S ++ I GLC+ +++A++ L ++ +K + P + ++ + + D N
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 145/316 (45%), Gaps = 20/316 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF--- 139
++ V+K+L + + + L+ I + E + LI Y A + L
Sbjct: 387 HNIVVKSLCKEGKLEEALGKLEKIAE-EGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
Query: 140 ----YKIPKFRINRVGF----------AIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
K+ F +N V + A E+L+ GF D + ++++ ++
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYF--KEY 503
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+ + L +M + + Y +I+ L + E++ +A+ LN++ G+ PD Y
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYN 563
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++++ + D A ++++ PDV T N +NGLC ++ +K+ E
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEK 623
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G K DVITYNTL+Q++CKV +++ +M+ KG+ + TY++++ L+ G EA
Sbjct: 624 GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683
Query: 366 CGLLEEALNKGLCTQS 381
+L + + G +QS
Sbjct: 684 HNMLHKLADSGKLSQS 699
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S + L ++EM+ G +V + V++SL K+ K+ +ALG L ++ +G+ PD++ Y
Sbjct: 365 SSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNT 424
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ + KA L DE++ GL D +T N + LCK E +++ + G
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD ++Y T++ A K L +M + ++ ++ TY+ +I GL + EA
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAI 544
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L E + KGL + ++ I C+ G + A +M + P
Sbjct: 545 DKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKP 592
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 127/293 (43%), Gaps = 4/293 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ L + +G D T + ++ + C+ +++ + + EM G V
Sbjct: 403 ALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVA--KAFTLMDEMVGKGLKMDTFTLNTV 460
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +L K ++ DA +L+ G PD V Y V+ + + A L+D+++ L
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P + TYN I GLC+ ++ I + + E G PD TYN ++ A CK +L
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+M ++ T + +++GL G + +A L E + KG ++ I +C
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ G V AL M K + P A + +L LS + + + +L D
Sbjct: 641 KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADS 693
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEEL--FDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G++P + VL+ + + L F L+ L L P+ YT+N+ ++ C + +
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ ++ M+ G PD +TYNTLL A C+ L R L+ MK GI TY+ ++
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
A G I +A ++E G ++ GLCQ G V +A L +M
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM 339
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 20/298 (6%)
Query: 131 RFQDSVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCVDGKTCS 173
R++D+ L + P+ F + V + A+ + + MI T +
Sbjct: 469 RYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYN 528
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ +C L E + + E+ + G Y +I + K+ + +A N+M
Sbjct: 529 TLIKGLCRMERLK--EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
+ KPD+V ++NG+ + KA +LF+ + G DV TYN I +CK +V+
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVD 646
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ ME G +PD TYN +L AL + ++ ++ G + ++
Sbjct: 647 TALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLK 706
Query: 354 DGLASKGDIIEACGLLE-EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
A + D+ E G E E+ K + E + GLC G +++A +L +M K
Sbjct: 707 PSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQK 764
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 2/154 (1%)
Query: 271 GLVPDVYTYNVYINGLCKQNNV--EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P + N ++ L + + +A + + + EL P+ T+N L+ C L
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ M+ G+ + TY+ +++ KG + EA LL G+ ++ +
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ G +++A ++++ M P R + L
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVL 319
>gi|147788269|emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 142/309 (45%), Gaps = 26/309 (8%)
Query: 122 LIKTYADAHRFQDSVNLFYKI----PKFRINRVGFAI-----------------EILNCM 160
L+++Y+ DS++ + P F R + I + LN M
Sbjct: 100 LLQSYSSISTVNDSISFLRHMIKSQPSFSPERSTYHILLSQSCKSPNSDLSAVHQTLNLM 159
Query: 161 INDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
+ GF D T + + S+C R+ + EL V+E+ Y +IR L K
Sbjct: 160 VTHGFPPDRVTTDIAVRSLCSAGREEHAIEL---VKELSLKHSPPDSFTYNFIIRHLCKT 216
Query: 220 EKVFDALGILNQMK-SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ +++++ S +KPD+V YT++++ V ++ +A L + L G PD Y
Sbjct: 217 RALSTVYNFIDELQNSFQLKPDLVTYTILIDNVCNGKNLREATRLLEVLGEAGFKPDCYV 276
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN + G C + I + M+E G +PD++TYNTL+ L K + R+ + M
Sbjct: 277 YNTIMKGYCILDKGSEAIGVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMA 336
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G + TY+ +++GL +G+ + A LLEE KG S ++ + GLC+ ++
Sbjct: 337 EMGHFPDAVTYTSLMNGLCREGNALGALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLE 396
Query: 399 KALELLKQM 407
+ +EL M
Sbjct: 397 RGIELYGVM 405
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 2/195 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +VC ++L E ++ + + GF Y +++ +K +A+G+
Sbjct: 241 TYTILIDNVCNGKNLR--EATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYK 298
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK +G++PD+V Y ++ G+ +A + D + +G PD TY +NGLC++
Sbjct: 299 KMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREG 358
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
N + ++ ME G P+ TYNTLL LCK+R L R EL MK G+ L +Y+
Sbjct: 359 NALGALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYA 418
Query: 351 IMIDGLASKGDIIEA 365
+ L +G + EA
Sbjct: 419 TFVRALCKEGRVAEA 433
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 14/357 (3%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-------FIFIDLIKTYADA 129
E P + +HF K + + + ++ + F +P F I T
Sbjct: 34 ETPQKPHHFPKKRPQPSGKTKKTRTPIEDPKSPVIFNSPNLLDAKKLFASITTTSTTPLD 93
Query: 130 HRFQDSVNLFYKIPKFRINRVGFAIEILNCMIND--GFCVDGKTCSLILSSVCEQRDLSS 187
RF +++ Y I+ V +I L MI F + T ++LS C+ +
Sbjct: 94 LRFHNALLQSYS----SISTVNDSISFLRHMIKSQPSFSPERSTYHILLSQSCKSPNSDL 149
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+ + M GF V +RSL + A+ ++ ++ PD Y +
Sbjct: 150 SAVHQTLNLMVTHGFPPDRVTTDIAVRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFI 209
Query: 248 LNGVIVQEDYVKAEELFDELL-VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+ + DEL L PD+ TY + I+ +C N+ +++ + E G
Sbjct: 210 IRHLCKTRALSTVYNFIDELQNSFQLKPDLVTYTILIDNVCNGKNLREATRLLEVLGEAG 269
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KPD YNT+++ C + + + + K+MK +G+ +L TY+ +I GL+ G + EA
Sbjct: 270 FKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEAR 329
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+ G + + + GLC+ G AL LL++M K SP + + LL
Sbjct: 330 KFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALALLEEMEAKGCSPNSCTYNTLL 386
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 134/364 (36%), Gaps = 82/364 (22%)
Query: 22 LSPYKAKWHQTLDQQQAKQN-----VKQSLTT------PPTKQQQQIP--------KQPH 62
SP ++ +H L Q N V Q+L PP + I ++ H
Sbjct: 127 FSPERSTYHILLSQSCKSPNSDLSAVHQTLNLMVTHGFPPDRVTTDIAVRSLCSAGREEH 186
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
+ L+ S+ + P Y+F+I+ L + + + +D ++ + + L
Sbjct: 187 AIE-LVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDLVTYTIL 245
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE--ILNCMINDGFCVDGKTCSLILSSVC 180
I + +++ L + GF + + N ++ G+C+ K
Sbjct: 246 IDNVCNGKNLREATRLLEVL-----GEAGFKPDCYVYNTIMK-GYCILDK---------- 289
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
E +G ++MK+ G +V Y +I L K +V +A L+ M G PD
Sbjct: 290 ------GSEAIGVYKKMKEEGVEPDLVTYNTLIFGLSKSGRVKEARKFLDIMAEMGHFPD 343
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV------------------- 281
V YT ++NG+ + + + A L +E+ G P+ TYN
Sbjct: 344 AVTYTSLMNGLCREGNALGALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLERGIELYG 403
Query: 282 ----------------YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL---LQALC 322
++ LCK+ V + + E S DV Y+TL L+ L
Sbjct: 404 VMKSGGMKLEKASYATFVRALCKEGRVAEAYEAFDYVVESKSFDDVTAYSTLENSLKWLR 463
Query: 323 KVRE 326
K RE
Sbjct: 464 KARE 467
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 120/244 (49%), Gaps = 2/244 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++ C + S LL EM G +V Y +I L + K+ DA +
Sbjct: 110 TYNCLVGEWCRTGEFKSARLL--FDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFE 167
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M+ +GI P +V + ++++G A F+++ GL P V TYN I G C+
Sbjct: 168 AMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRAR 227
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ I+ + M+E P +TY L+ A K E++R E++ EM+ G+ +++Q+Y
Sbjct: 228 DIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYG 287
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+++ L +G ++ A L + +KG+ + ++D I G + G KAL L+ +M
Sbjct: 288 VLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKS 347
Query: 411 DVSP 414
+ P
Sbjct: 348 GLIP 351
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 2/237 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+++++ +C L L + M++ G MV + +I K K+ +AL NQM
Sbjct: 147 NILIAGLCRHGKLKDAAQL--FEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQM 204
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K+ G++P +V Y ++ G D A F ++ L P TY + I K+N +
Sbjct: 205 KAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEM 264
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ +M++ ME+ G + DV +Y LL ALC ++ R+L + M KG+ N Y +M
Sbjct: 265 DRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMM 324
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
I G +G +A L+ E GL + + TI LC G ++A L+ M D
Sbjct: 325 IYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMED 381
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 1/212 (0%)
Query: 213 IRSLVKKEKVFDALGILNQ-MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+R L +V AL +L + KS D+ T +++G D +A +FD + LG
Sbjct: 9 VRRLCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLG 68
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P+ TY I+G + E G ++ M G +P++ TYN L+ C+ E R
Sbjct: 69 VTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSAR 128
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L EM KG+V N+ +Y+I+I GL G + +A L E +G+ F+ I G
Sbjct: 129 LLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGY 188
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + AL QM + P + L+
Sbjct: 189 GKAGKMSNALHFFNQMKAAGLQPSVVTYNELI 220
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 120/292 (41%), Gaps = 37/292 (12%)
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
+D C+ ++ C+ D++ E M +LG V YT +I + +
Sbjct: 36 LDVAACTALVHGCCQSGDVA--EARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGF 93
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
++ +M+ G++P++ Y ++ ++ A LFDE+ + G+V +V +YN+ I GL
Sbjct: 94 ALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGL 153
Query: 287 CKQNNVEAGIKMIACMEE-----------------------------------LGSKPDV 311
C+ ++ ++ M G +P V
Sbjct: 154 CRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSV 213
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TYN L+ C+ R++ +MK + + TY+I+I A + ++ A +L E
Sbjct: 214 VTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSE 273
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL + + LC G + A +L + M K V P +++ ++
Sbjct: 274 MEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMI 325
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 121/276 (43%), Gaps = 21/276 (7%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
+Y+ +I L + + D + + + + +RE F LI Y A + ++++ F
Sbjct: 145 SYNILIAGLCRHGKLKDAAQLFEAM-RREGIHPSMVTFNLLIDGYGKAGKMSNALHFF-- 201
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
N M G T + ++ C RD++ + +MK+
Sbjct: 202 ----------------NQMKAAGLQPSVVTYNELIGGFCRARDIA--HAIRAFSDMKERR 243
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
V YT +I + K+ ++ A +L++M+ G++ D+ Y ++L+ + ++ + A
Sbjct: 244 LAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHAR 303
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+LF + G+ P+ Y++ I G ++ + +++I M + G P+V +Y ++ L
Sbjct: 304 KLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLL 363
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
C + L+ +M+ G+ + ++ D A
Sbjct: 364 CNEGKCQEAEALIGDMEDAGLQTSESICRVLFDAKA 399
>gi|357451329|ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 176/421 (41%), Gaps = 68/421 (16%)
Query: 33 LDQQQAKQNVKQSLTTPPT-KQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKT-- 89
+ Q++++ KQ PP+ + P H SSL+ S P+ +HF KT
Sbjct: 5 FNPQKSERRRKQYGKIPPSFRSALSNPNLIHRSSSLIPS--------SPKPHHFPNKTRK 56
Query: 90 -------------------LAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAH 130
+ ++ + S+ + N L+++YA
Sbjct: 57 PHQKQQQSQSQSQSPKPVSVFKSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYASIS 116
Query: 131 RFQDSVNLFYKI----PKFRINRVGFAI--------------------EILNCMINDGFC 166
DS+ + P F ++ + I + LN M++DG
Sbjct: 117 TINDSIAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGIS 176
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
D T L + S+C + D+ + ++E+ + Y ++++L K +
Sbjct: 177 PDKGTVDLAVRSLCTADRV--DDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTL---- 230
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ P++V YT++++ V ++ +A L D L G PD + YN + G
Sbjct: 231 --------SLVYPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGY 282
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C + I++ M+E G +PD+ITYNTL+ L K ++ ++L++ M KG +
Sbjct: 283 CMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDE 342
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +++G+ KG+ + A LLEE KG + ++ + GLC+ + KA+EL
Sbjct: 343 VTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGA 402
Query: 407 M 407
M
Sbjct: 403 M 403
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 2/203 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +VC ++L E V +++ GF Y +++ + +A+ + N
Sbjct: 239 TYTILIDNVCNTKNLR--EATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYN 296
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK G++PD++ Y ++ G+ +A++L + G PD TY +NG+C++
Sbjct: 297 RMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKG 356
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
A + ++ ME G P+ TYNTLL LCK R ++ EL MK G+ L++ +Y+
Sbjct: 357 ETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYA 416
Query: 351 IMIDGLASKGDIIEACGLLEEAL 373
+ L S G + +A + + A+
Sbjct: 417 TFVRALCSVGRVADAYEVFDYAV 439
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 16/264 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDI-------SSVLDHIEKRENFETPEFIF 119
L+ S +C P +Y+F++K L ++ + + ++D++ +N +
Sbjct: 201 LIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYPNLVTYTILIDNVCNTKNLREATRL- 259
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFR--INRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+D++ + F+ L+ I K ++R AIE+ N M G D T + ++
Sbjct: 260 VDIL----EEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIF 315
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+ + +S E ++ M + G V YT+++ + +K + AL +L +M+ G
Sbjct: 316 GLSKSGRVS--EAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGC 373
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P+ Y +L+G+ + KA EL+ + GL D+ +Y ++ LC V +
Sbjct: 374 SPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYE 433
Query: 298 MIACMEELGSKPDVITYNTLLQAL 321
+ E S DV Y+TL L
Sbjct: 434 VFDYAVESKSLSDVAAYSTLESTL 457
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 158/368 (42%), Gaps = 23/368 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AY +I + D +LD + R +T FI LI Y ++
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEM-LRLGLKTNLFICNSLINGYCKRGEIHEAEG 388
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+ ++ + + ++ L DG+C +G T E +M
Sbjct: 389 VITRMVDWNLKPDSYSYNTLL----DGYCREGHT----------------SEAFNLCDKM 428
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
+ G ++ Y +++ L + DAL I + M G+ PD V Y+ +L+G+ E++
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENF 488
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
A L+ ++L G T+N I+GLCK + ++ M++LG PD ITY TL
Sbjct: 489 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTL 548
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ CK + + ++ M+ + I +++ Y+ +I GL ++E LL E +GL
Sbjct: 549 IDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGL 608
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNT 435
+ I G C+ G++ KA +M + +S + ++ L + ++D N
Sbjct: 609 TPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANL 668
Query: 436 SFIRLVDQ 443
++VD
Sbjct: 669 LMQKMVDH 676
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 91/169 (53%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y I L K KV DA + + G PD Y +++G + +A L DE+L
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GLVP++ TYN INGLCK NV+ ++ + + G P+V+TYNTL+ CK+ ++
Sbjct: 777 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 836
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+L +M +GI ++ TYS +I+GL GDI + LL + + G+
Sbjct: 837 AAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 3/265 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI G D S+++++ C +D DE GFV++M+ LG +V Y ++I V
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFC--KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV-LGLVPDVYT 278
V A G+L M G+ ++V YT+++ G Q +AE++ + LVPD
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 334
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y V I+G C+ ++ ++++ M LG K ++ N+L+ CK E++ ++ M
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
+ + +Y+ ++DG +G EA L ++ L +G+ ++ + GLC+ G
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
AL++ M V+P + LL
Sbjct: 455 DALQIWHLMMKXGVAPDEVGYSTLL 479
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 44/287 (15%)
Query: 176 LSSVCEQRDLSS---DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
L +C+ +D + DEL+G +E F F + +++ V+K +AL + + M
Sbjct: 128 LVDLCKFKDRGNVIWDELVGVYRE-----FAFSPTVFDMILKVYVEKGLTKNALYVFDNM 182
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G P + +LN ++ + A ++ +++ +G+VPDV+ ++ +N CK V
Sbjct: 183 GKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKV 242
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS-- 350
+ + ME LG +P+++TY++L+ + ++ + ++K M KG+ N+ TY+
Sbjct: 243 DEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 302
Query: 351 ----------------------------------IMIDGLASKGDIIEACGLLEEALNKG 376
++IDG G I +A LL+E L G
Sbjct: 303 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 362
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L T + + I G C+RG + +A ++ +M D ++ P + + LL
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLL 409
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M +G + CS ++S + + LL +Q+M GF D+ ++S ++
Sbjct: 638 MTENGLSANIIICSTMVSGLYRLGRIDEANLL--MQKMVDHGF---FPDHECFLKSDIRY 692
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ L++ + P+ + Y + + G+ A F L + G VPD +TY
Sbjct: 693 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTY 752
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
I+G NV+ ++ M G P+++TYN L+ LCK ++R + L ++
Sbjct: 753 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ 812
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG+ N+ TY+ +IDG G++ A L ++ + +G+ + I GLC+ G + +
Sbjct: 813 KGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIER 872
Query: 400 ALELLKQMADKDV 412
+++LL QM V
Sbjct: 873 SMKLLNQMIKAGV 885
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ F + GF Y +I V +A + ++M G+ P+IV Y +
Sbjct: 731 DDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 790
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ E+ +A+ LF +L GL P+V TYN I+G CK N++A K+ M E G
Sbjct: 791 INGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 850
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
P V+TY+ L+ LCK ++ R +L+ +M G+ L Y ++ G
Sbjct: 851 SPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 3/228 (1%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM + G ++ + ++ L + ++ +A ++ +M G PD C+ L I
Sbjct: 637 EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF---LKSDIRYA 693
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
K + DE L+P+ YN+ I GLCK V+ + + + G PD TY
Sbjct: 694 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC 753
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ ++ L EM +G+V N+ TY+ +I+GL ++ A L + K
Sbjct: 754 TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL ++ I G C+ G + A +L +M ++ +SP + AL+
Sbjct: 814 GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALI 861
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 164 GFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
GF D T C+LI + DE EM + G +V Y +I L K E V
Sbjct: 744 GFVPDNFTYCTLIHGYSAAG---NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
A + +++ G+ P++V Y +++G + A +L D+++ G+ P V TY+
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
INGLCK ++E +K++ M + G +I Y TL+Q K N +
Sbjct: 861 INGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEM 908
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 9/206 (4%)
Query: 244 YTMVLNGVIVQEDYVK-AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+ M+L V V++ K A +FD + G +P + + N +N L K + M
Sbjct: 159 FDMILK-VYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
+G PDV + ++ A CK +++ VK+M+ G+ N+ TY +I+G S GD+
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK-DVSPGARVWEA 421
A G+L+ KG+ + I G C++ + +A ++L+ M ++ + P R +
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337
Query: 422 LL--LSSVSKLDFVNTSFIRLVDQIL 445
L+ K+D +RL+D++L
Sbjct: 338 LIDGYCRTGKID----DAVRLLDEML 359
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 97/161 (60%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+FD+++ GL+PDV N + L +N + + ME+ G KP V+TYNT+L + C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K +++ EL+ EM+ +G N TY+++++GL+ KG++ +A GL+EE LN GL +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G CQ+GL +A +L+++M ++ P + L+
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLM 327
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 177/395 (44%), Gaps = 34/395 (8%)
Query: 51 TKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE 110
+ Q + PH+ +LHS I P A F +A+
Sbjct: 75 SDQFGAVITDPHLFIRVLHSMRI----RPRVALRFFRWVMAQ-----------------P 113
Query: 111 NFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVG--------FAIEILNCMIN 162
+F+ EF+F ++ + + ++ F ++ V + + + MI
Sbjct: 114 DFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIR 173
Query: 163 DGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
+G D K C+ IL + ++ LS + + G M++ G +V Y ++ S K+ +
Sbjct: 174 NGLLPDVKNCNRILRVLRDENLLSKAKNVYGM---MEQFGIKPTVVTYNTMLDSYCKEGR 230
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V AL +L++M+ G P+ V Y +++NG+ + + +A+ L +E+L GL YTYN
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
ING C++ ++ M + P + TYNTL+ LCK ++ +R +M
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
++ +++ ++ G G I EA L +E + L ++ I GLC G + AL
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410
Query: 402 ELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
L K+M D+ + P + +L++ KL +V+ +
Sbjct: 411 RLKKEMTDQGLFPDIFTY-TILVNGCFKLGYVSMA 444
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 111/236 (47%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D L +EM G + YT ++ K V A G N+M S G+KPD Y
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G + D A + +E+L G PDV TYNV+++ LC+Q N E ++ M G
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD +TY +++ K L + RE+ EM KG+ ++ TY+++I A+K + A
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ L K + ++ I GLC + +A + +M +K + P + L+
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 118/251 (47%), Gaps = 2/251 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+M K F +V + +++ + + +A + +++K + P ++ Y +++G+ +
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
A L E+ GL PD++TY + +NG K V M G KPD Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NT + K+ + + + +EM G ++ TY++ + L +G+ EAC LLE ++
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK--LDF 432
GL + I G + G +RKA E+ +M K V+P + L+ + +K LD
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDL 583
Query: 433 VNTSFIRLVDQ 443
F +++++
Sbjct: 584 AFMYFSKMLEK 594
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F++ V A N M++ G D + + V E + + +EM GF
Sbjct: 436 FKLGYVSMARGFFNEMLSKGLKPDRFAYNTRI--VGEMKIADTSVAFSMQEEMLAAGFPP 493
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ Y + +L ++ +A +L M SDG+ PD V YT ++NG + KA E+F
Sbjct: 494 DVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVF 553
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+E+L G+ P V TY V I+ + ++ + M E +VITYN ++ LC
Sbjct: 554 NEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMT 613
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
R ++ + EM+ KGI+ N +Y+I+I+ + G EA L E L++
Sbjct: 614 RRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR 664
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ F D + + +L C +S LL E+K ++ Y +I L
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL--FDELKCRDLVPTVITYNTLIHGLCMW 403
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ AL + +M G+ PDI YT+++NG A F+E+L GL PD + Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N I G K + M M G PDVITYN + ALC+ +L++ M
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G++ + TY+ +I+G G + +A + E L+KG+ + I + ++
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDL 583
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A +M +K V + A++
Sbjct: 584 AFMYFSKMLEKSVPANVITYNAII 607
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%)
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
GF EM G Y I +K A + +M + G PD++ Y + ++ +
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
Q ++ +A +L + ++ GL+PD TY ING K ++ ++ M G P V
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TY L+ A + L+ +M K + N+ TY+ +I+GL + EA +E
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KG+ + I C G +AL L ++M D+ + P +
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ + +I A + M+ GF D T ++ + ++C+Q + +E ++ M G
Sbjct: 468 VGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNF--EEACDLLENMVSDG 525
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
V YT++I VK + A + N+M S G+ P +V YT++++ ++ A
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF 585
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
F ++L + +V TYN INGLC ++ K MEE G P+ +Y L+
Sbjct: 586 MYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINES 645
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
C + L +EM + I + T+S+ + L
Sbjct: 646 CNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ N M++ G T ++++ + ++ L D + +M + ++ Y +
Sbjct: 549 AREVFNEMLSKGVAPSVVTYTVLIHAHAAKQML--DLAFMYFSKMLEKSVPANVITYNAI 606
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L ++ +A ++M+ GI P+ YT+++N + +A L+ E+L +
Sbjct: 607 INGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKI 666
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
PD +T++V++ L + V A + C+E L
Sbjct: 667 QPDSFTHSVFLKNLHRDYQVHA----VQCVESL 695
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 131/269 (48%), Gaps = 2/269 (0%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
E+L M N G T ++++ S+ D+S E + V EMK + YT VI
Sbjct: 188 ELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAV--VDEMKAKNVAGDVYLYTAVIN 245
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+ + V A + ++ +GI+P+ Y +++NG AE L ++ G+
Sbjct: 246 AYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGH 305
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
+ +N I+G C+Q V+ +K+ A ME++G + DV TYNTL LC+V + + L+
Sbjct: 306 NQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLL 365
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
M KG+ N TY+ +I +GD++EA L E KG ++ + G ++
Sbjct: 366 HIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKK 425
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALL 423
G +R+A K+M K + P + +L+
Sbjct: 426 GSIREAERFRKEMEKKGLVPDVYTYASLV 454
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 156/333 (46%), Gaps = 34/333 (10%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y ++ +L+ + +V+D + K +N +++ +I Y A + + +F +
Sbjct: 205 YTILVDSLSTAGDISKVEAVVDEM-KAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDEC 263
Query: 143 PKFRINRVGFAIE----ILNCMINDGFCVDGK--TCSLILSSVCEQRDLSSDELL----- 191
VG IE +IN GFC G+ ++L+ + + R + ++++
Sbjct: 264 -------VGNGIEPNERTYGVLIN-GFCKIGQMEAAEMLLADM-QGRGVGHNQIIFNTMI 314
Query: 192 -GFVQE------------MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
G+ ++ M+K+G + Y + L + ++ +A +L+ M G+
Sbjct: 315 DGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVP 374
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P+ V YT +++ + D V+A LF E+ G +P V TYNV ++G K+ ++ +
Sbjct: 375 PNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERF 434
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
ME+ G PDV TY +L+ C +++ +L +EMK +G N+ Y+ +I GLA
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAK 494
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+G EA L ++ L GL S++ + L
Sbjct: 495 EGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 16/264 (6%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
++ DGFC G+ D+ + EM + G + Y +++ V++
Sbjct: 137 VVVDGFCKSGRV----------------DDARALLDEMPRHGVRLNALCYNSLLDCYVRR 180
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +L M++ GI+ + YT++++ + D K E + DE+ + DVY Y
Sbjct: 181 KDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLY 240
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
IN C+ NV ++ G +P+ TY L+ CK+ ++ L+ +M+
Sbjct: 241 TAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQG 300
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ N ++ MIDG +G + A + G+ ++ CGLC+ + +
Sbjct: 301 RGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAE 360
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A LL M +K V P + L+
Sbjct: 361 AKTLLHIMIEKGVPPNYVTYTTLI 384
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 75/144 (52%)
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+V ++G CK V+ ++ M G + + + YN+LL + ++ R++EL++ M+
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
GI + TY+I++D L++ GDI + +++E K + ++ I C+ G VR+
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A E+ + + P R + L+
Sbjct: 256 ASEVFDECVGNGIEPNERTYGVLI 279
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 38/219 (17%)
Query: 198 KKLGFCFGMVD---YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ LG C G V + V+ K +V DA +L++M G++ + +CY +L+ + +
Sbjct: 121 RALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRR 180
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+D + +EL + ME G + V TY
Sbjct: 181 KDDARVQELLE-----------------------------------IMENGGIEATVGTY 205
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
L+ +L +++++ +V EMK K + ++ Y+ +I+ G++ A + +E +
Sbjct: 206 TILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVG 265
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
G+ + I G C+ G + A LL M + V
Sbjct: 266 NGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVG 304
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 33/178 (18%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-------------------- 185
R+NR+ A +L+ MI G + T + ++S C++ D+
Sbjct: 354 RVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVV 413
Query: 186 -------------SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S E F +EM+K G + Y +++ KV AL + +M
Sbjct: 414 TYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEM 473
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
K G +P++V YT +++G+ + +A +L+D++L GL PD Y+ + L N
Sbjct: 474 KHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDN 531
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 18/254 (7%)
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
C++ DG C +G+ +E + + EMK+ G +V Y+ +I
Sbjct: 49 CILMDGLCKEGRV----------------EEAMRLLGEMKRKGLEVDVVVYSTLISGFCS 92
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
K + + ++M GI P++V Y+ ++NG + + +A + + G+ PDVYT
Sbjct: 93 KGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYT 152
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y I GLCK + + M E G +P +TYN L+ LCK + ++ + M
Sbjct: 153 YTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETML 212
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM--FDETICGLCQRGL 396
KG L + +Y+ +I GL + G + EA L L G + + F+ I GLC+ G
Sbjct: 213 EKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGR 272
Query: 397 VRKALELLKQMADK 410
+ KA+E+ M ++
Sbjct: 273 LDKAVEIYDTMIER 286
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 100/192 (52%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
MK I PDIV Y ++NG+ ++ KA +L E+ P+ +TY + ++GLCK+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
VE ++++ M+ G + DV+ Y+TL+ C L+R + L EM KGI N+ YS
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I+G KG EA +L +G+ + I GLC+ G RKAL+L M +K
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 412 VSPGARVWEALL 423
P + L+
Sbjct: 181 EEPSTVTYNVLI 192
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y ++ L K+ +V +A+ +L +MK G++ D+V Y+ +++G + + + LFDE+L
Sbjct: 48 YCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEML 107
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P+V Y+ ING CK+ ++ M E G +PDV TY ++ LCK
Sbjct: 108 EKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRAR 167
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ +L M KG + TY+++I+GL +G I +A + E L KG + ++ I
Sbjct: 168 KALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLI 227
Query: 389 CGLCQRGLVRKALELLKQM 407
GLC G + +A++L +
Sbjct: 228 MGLCNNGKLDEAMKLFSSL 246
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 132/315 (41%), Gaps = 39/315 (12%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+ +L M G VD S ++S C + L + L EM + G +V
Sbjct: 59 GRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKAL--FDEMLEKGISPNVV 116
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +I KK +A +L+ M GI+PD+ YT ++ G+ KA +LFD +
Sbjct: 117 VYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM 176
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK------------------- 308
G P TYNV INGLCK+ + K+ M E G +
Sbjct: 177 TEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKL 236
Query: 309 ------------------PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
PDVIT+NT++Q LCK L++ E+ M +G NL T
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I+I G I +A L + GL S+ + I G C+ ++ A L +M
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKIS 356
Query: 411 DVSPGARVWEALLLS 425
+SP + L+ S
Sbjct: 357 GLSPTLFDYNTLMAS 371
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
MK++ +V Y +I L K++++ A+ +L +M+ +P+ Y ++++G+ +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
+A L E+ GL DV Y+ I+G C + ++ G + M E G P+V+ Y+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ CK ++ M +GI ++ TY+ MI GL G +A L + KG
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+ ++ I GLC+ G + A ++ + M +K
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEK 214
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 133/263 (50%), Gaps = 6/263 (2%)
Query: 153 AIEILNCMINDGFCV--DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
A+++ + ++ DG V D T + ++ +C++ L D+ + M + G FG +
Sbjct: 239 AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRL--DKAVEIYDTMIERG-SFGNLFTC 295
Query: 211 NVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+++ K + D A+ + ++ G+ P Y+++++G A+ LF + +
Sbjct: 296 HILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKI 355
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
GL P ++ YN + LCK++++E ++ M+E +PD I++N ++ K +++
Sbjct: 356 SGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHS 415
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+EL+ +M+ G+ + TYS I+ L+ G + EA G + + G+ + ++D I
Sbjct: 416 AKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIK 475
Query: 390 GLCQRGLVRKALELLKQMADKDV 412
G + + + LL+QMAD V
Sbjct: 476 GFGLNDEIEEVINLLRQMADMGV 498
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 3/284 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R+ A+EI + MI G + TC +++ + + D+ + + + KLG
Sbjct: 271 GRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGII--DKAMELWKRVHKLGLVPSST 328
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +I K + A G+ ++MK G+ P + Y ++ + + +A LF E+
Sbjct: 329 TYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEM 388
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PD ++N+ I+G K ++ + +++ M+++G PD TY++ + L K+ ++
Sbjct: 389 KESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQM 448
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ M GI + Y +I G +I E LL + + G+ + +
Sbjct: 449 EEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSI 508
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+ LC +ELL + + S G + LL + K +
Sbjct: 509 LTFLCNSAEHLHVMELLPNFSSES-SGGTSISCDKLLMKIQKFN 551
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
+++L+ MI G D + ++ +C R+ D F++ + G+ ++ Y+ ++
Sbjct: 45 MKLLDEMIESGLRPDMFIFNAVVGGMC--REGLVDRAFEFIRYISAKGYAPDVISYSILL 102
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R L+ + K D +++ M S G +P++V Y+++++ + +A L + GL
Sbjct: 103 RGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLT 162
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PD Y+Y+ I CK++ V+ I+ + M G PD++ YNT+L LCK + + ++
Sbjct: 163 PDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKI 222
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+++ G N+ +Y+ + L S G I A G++ E L+K + ++ I LC+
Sbjct: 223 FEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLISCLCR 282
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLL 424
+V +A+ELL M P + +LL
Sbjct: 283 DAMVDQAIELLVDMESSVYQPSVISYNIVLL 313
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 116/236 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+++ + EM + G M + V+ + ++ V A + + + G PD++ Y+++
Sbjct: 42 DDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKGYAPDVISYSIL 101
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L G++ Q + E+L ++L G P+V TY++ I+ LC+ VE + ++ M+E G
Sbjct: 102 LRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGL 161
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD +Y+ L+ A CK ++ E ++ M G + ++ Y+ ++ L G EA
Sbjct: 162 TPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALK 221
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E+ G S ++ L G +AL ++ +M KD+ P + +L+
Sbjct: 222 IFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLI 277
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 109/218 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT +I + + K V D + +L++M G++PD+ + V+ G+ + +A E
Sbjct: 25 LVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIR 84
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G PDV +Y++ + GL Q E G K+++ M G +P+V+TY+ L+ +LC+
Sbjct: 85 YISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDG 144
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L+K MK +G+ + +Y +I + + A LE ++ G ++
Sbjct: 145 KVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYN 204
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ LC+ G +AL++ +++ + P + L
Sbjct: 205 TILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLF 242
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 2/195 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S+++SS+C RD +E + ++ MK+ G Y +I + K+ +V A+ L
Sbjct: 132 TYSILISSLC--RDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLE 189
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M SDG PDIV Y +L+ + +A ++F++L +G P+V +YN + L
Sbjct: 190 SMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSG 249
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + MI M PD ITYN+L+ LC+ +++ EL+ +M+ ++ +Y+
Sbjct: 250 HKIRALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYN 309
Query: 351 IMIDGLASKGDIIEA 365
I++ GL+ I +A
Sbjct: 310 IVLLGLSKVHRISDA 324
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
CEP Y +I +L + + + S+L + +E TP DA+ +
Sbjct: 125 GCEPNVVTYSILISSLCRDGKVEEAVSLLKVM--KEQGLTP------------DAYSYDP 170
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ F K +RV AIE L MI+DG D + ILS++C ++ +DE L
Sbjct: 171 LIAAFCKE-----SRVDLAIEFLESMISDGCLPDIVNYNTILSTLC--KNGKADEALKIF 223
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+++ ++G + Y + +L ALG++ +M S I PD + Y +++ +
Sbjct: 224 EKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLISCLCRD 283
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+A EL ++ P V +YN+ + GL K + + I+
Sbjct: 284 AMVDQAIELLVDMESSVYQPSVISYNIVLLGLSKVHRISDAIE 326
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
++L TY+I+I+ KG + + LL+E + GL +F+ + G+C+ GLV +A E
Sbjct: 23 ISLVTYTILIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEF 82
Query: 404 LKQMADKDVSPGARVWEALL 423
++ ++ K +P + LL
Sbjct: 83 IRYISAKGYAPDVISYSILL 102
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 143/284 (50%), Gaps = 5/284 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R G A+ +L M G D T ++ +C+ +L D L + EM G +V
Sbjct: 138 RTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASEL--DAALELLDEMCGSGVQPNVVV 195
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ ++R + + D + M GIKPD++ +T +++ + + KA ++ D ++
Sbjct: 196 YSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMV 255
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
GL P+V TYNV IN LCK+ +V + + M++ G PDV+TYNTL+ L V E++
Sbjct: 256 QRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMD 315
Query: 329 RLRELVKEMKWKGIVL--NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++EM V+ ++ T++ +I GL G + +A + E +G ++
Sbjct: 316 EAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNY 375
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
I G + V+ A+ L+ ++A + P + + ++L++ SK+
Sbjct: 376 LIGGFLRVHKVKMAMNLMDELAISGLEPDSFTY-SILINGFSKM 418
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 127/240 (52%), Gaps = 4/240 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ ++ +C R + E + ++ M+ G +V Y +IR L ++ AL +L++M
Sbjct: 127 TTVMRGLCASR--RTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM 184
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G++P++V Y+ +L G + ++F+++ G+ PDV + I+ LCK+
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKT 244
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
K+ M + G +P+V+TYN L+ +LCK + L KEM KG+ ++ TY+ +
Sbjct: 245 GKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTL 304
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSM--FDETICGLCQRGLVRKALELLKQMADK 410
I GL+ ++ EA LEE + + + F+ I GLC+ G + +A+++ + MA++
Sbjct: 305 IAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAER 364
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT V+R L + +A+ +L M++ G++ D+V Y ++ G+ + A EL DE
Sbjct: 124 VSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDE 183
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ P+V Y+ + G C+ + K+ M G KPDVI + L+ LCK +
Sbjct: 184 MCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGK 243
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ ++ M +G+ N+ TY+++I+ L +G + EA L +E +KG+ ++
Sbjct: 244 TGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNT 303
Query: 387 TICGLCQRGLVRKALELLKQMADKD 411
I GL + +A+ L++M D
Sbjct: 304 LIAGLSGVLEMDEAMSFLEEMIQGD 328
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 165/362 (45%), Gaps = 28/362 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+LL S Y +I+ L + S+ +LD + + ++ L++
Sbjct: 144 ALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCG-SGVQPNVVVYSCLLRG 202
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQR 183
Y + R+QD +F + +R G +++ +I+D C +GKT + +
Sbjct: 203 YCRSGRWQDVGKVFEDM-----SRRGIKPDVIMFTGLIDD-LCKEGKT-----GKAAKVK 251
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D+ M + G +V Y +I SL K+ V +AL + +M G+ PD+V
Sbjct: 252 DM-----------MVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLV--PDVYTYNVYINGLCKQNNVEAGIKMIAC 301
Y ++ G+ + +A +E++ V PDV T+N I+GLCK + +K+
Sbjct: 301 YNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREM 360
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M E G +++TYN L+ +V ++ L+ E+ G+ + TYSI+I+G + +
Sbjct: 361 MAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWE 420
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ A L +G+ + + + +CQ+G++ +A+ L +M DK+ A +
Sbjct: 421 VDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYST 479
Query: 422 LL 423
++
Sbjct: 480 MI 481
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 118/232 (50%), Gaps = 7/232 (3%)
Query: 207 VDYTNVIRSLVKK--EKVFDALGILNQMKSDG---IKPDIVCYTMVLNGVIVQEDYVKAE 261
V Y V+ +L ++ + + A +L M + +P+ V YT V+ G+ +A
Sbjct: 84 VSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAV 143
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
L + G+ DV TY I GLC + ++A ++++ M G +P+V+ Y+ LL+
Sbjct: 144 ALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGY 203
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ + ++ ++M +GI ++ ++ +ID L +G +A + + + +GL
Sbjct: 204 CRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNV 263
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
++ I LC+ G VR+AL L K+M DK V+P + L+ LS V ++D
Sbjct: 264 VTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMD 315
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 136 VNLFYKIPKF-RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
V Y I F R+++V A+ +++ + G D T S++++ + ++ E F+
Sbjct: 371 VTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAE--KFL 428
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYTMVLNGVIV 253
M++ G + Y ++ ++ ++ + A+G+ N+M K+ G+ D + Y+ +++G
Sbjct: 429 CTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL--DAIAYSTMIHGACK 486
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D ++L ++L GL PD TY++ IN K ++E +++ M G PDV
Sbjct: 487 SGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAV 546
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++L++ + +++ +L+ EM+ K + + + S +I
Sbjct: 547 FDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 305 LGSKPDV---ITYNTLLQALCKVR--ELNRLRELVKEMKWK---GIVLNLQTYSIMIDGL 356
L + PDV ++YNT+L ALC+ L + R L+ +M + N +Y+ ++ GL
Sbjct: 74 LSALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGL 133
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ EA LL G+ + I GLC + ALELL +M V P
Sbjct: 134 CASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNV 193
Query: 417 RVWEALL 423
V+ LL
Sbjct: 194 VVYSCLL 200
>gi|414876958|tpg|DAA54089.1| TPA: hypothetical protein ZEAMMB73_851506 [Zea mays]
gi|414876959|tpg|DAA54090.1| TPA: hypothetical protein ZEAMMB73_851506 [Zea mays]
Length = 1090
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 150/302 (49%), Gaps = 11/302 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK--LGFCFGMVDYT 210
A+ + + M N G VD + CS I+S R + L F ++K+ GF G+V T
Sbjct: 152 ALRVFDIMTNRGCQVDDRICSSIVSGF--SRTGKAGAGLHFYDKVKRQFSGFDPGLVTLT 209
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+V+ +L + + + ++ +M+ G+ D V Y +++G + + ++ +L
Sbjct: 210 SVVHALGLEGRTGEMAELMREMECKGMNADAVFYGSMVHGYMSRGFLMEGLREHRSMLGK 269
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ DV Y I+GLC++ +VE + M + +KP++ITY +L+ CK
Sbjct: 270 GITADVINYTTVIDGLCREGSVEKVTGFLDEMVRVDAKPNLITYTSLVGGFCKRDRWEDA 329
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+V++++ G+V++ YSI+ID L D+ A LL E NKG+ ++ I G
Sbjct: 330 FSIVRKLEQTGMVVDEYVYSILIDSLCKMDDLDRAFSLLTEMENKGIKASIITYNAIING 389
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCK 450
LC+ G KA+E+ + +A + + + LL +++ D T + + D++ +
Sbjct: 390 LCKAGHCEKAVEISEGVAADNFT-----YSTLLHGYINRGDI--TGVMAMKDRLEGSGIS 442
Query: 451 ME 452
M+
Sbjct: 443 MD 444
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 16/298 (5%)
Query: 151 GFAIEILN---CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
GF +E L M+ G D + ++ +C R+ S +++ GF+ EM ++ ++
Sbjct: 254 GFLMEGLREHRSMLGKGITADVINYTTVIDGLC--REGSVEKVTGFLDEMVRVDAKPNLI 311
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT+++ K+++ DA I+ +++ G+ D Y+++++ + +D +A L E+
Sbjct: 312 TYTSLVGGFCKRDRWEDAFSIVRKLEQTGMVVDEYVYSILIDSLCKMDDLDRAFSLLTEM 371
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ + TYN INGLCK + E +++ G D TY+TLL ++
Sbjct: 372 ENKGIKASIITYNAIINGLCKAGHCEKAVEI-----SEGVAADNFTYSTLLHGYINRGDI 426
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + ++ GI +++ T +++I L + +A L + GL + +
Sbjct: 427 TGVMAMKDRLEGSGISMDVVTCNVLIKALFMINKVNDAWSLFHKMPEIGLRPNTITYHTI 486
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
I LC+ V KALEL + A V E L+ + N + + DQI
Sbjct: 487 IDKLCKAEQVDKALELFDEYKKDAGFSSAVVHECLIRA------LCNGGKVNMADQIF 538
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F++ ++ GF + Y+ V+ L K + AL + MK +G +P+IV + VL+G+
Sbjct: 709 FLKVAEQSGFSVDLTMYSIVVDGLCKGGYLEKALDLCEGMKKEGFQPNIVIHNSVLSGLC 768
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
Q +A LFD L ++P + TY + I LC++ ++ ++ M G KP
Sbjct: 769 HQGCLTEAFRLFDYLENSKMLPTIITYTILIGALCREGLLDDADQLFQKMSTKGIKPTTR 828
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
YN L+ C + EL+ M+ I+ + T +I+GL KG+ A E
Sbjct: 829 VYNLLISGHCNFGLTGKALELMSHMEELFILPDCFTLGAIINGLCLKGETEAALRFFNEY 888
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
++ + F I GL +G + ++ +L++M
Sbjct: 889 RHRNIDPDFVGFMSLIKGLYAKGRMEESRGILREM 923
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 28/281 (9%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYK 141
Y VI L ++ LD + + + P I + L+ + R++D+ ++ K
Sbjct: 278 YTTVIDGLCREGSVEKVTGFLDEMVRVD--AKPNLITYTSLVGGFCKRDRWEDAFSIVRK 335
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ + G VD S+++ S+C+ DL D + EM+ G
Sbjct: 336 LEQ------------------TGMVVDEYVYSILIDSLCKMDDL--DRAFSLLTEMENKG 375
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
++ Y +I L K A+ I S+G+ D Y+ +L+G I + D
Sbjct: 376 IKASIITYNAIINGLCKAGHCEKAVEI-----SEGVAADNFTYSTLLHGYINRGDITGVM 430
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+ D L G+ DV T NV I L N V + M E+G +P+ ITY+T++ L
Sbjct: 431 AMKDRLEGSGISMDVVTCNVLIKALFMINKVNDAWSLFHKMPEIGLRPNTITYHTIIDKL 490
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
CK ++++ EL E K + + +I L + G +
Sbjct: 491 CKAEQVDKALELFDEYKKDAGFSSAVVHECLIRALCNGGKV 531
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF VD S+++ +C+ L ++ L + MKK GF +V + +V+ L + +
Sbjct: 717 GFSVDLTMYSIVVDGLCKGGYL--EKALDLCEGMKKEGFQPNIVIHNSVLSGLCHQGCLT 774
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A + + +++ + P I+ YT+++ + + A++LF ++ G+ P YN+ I
Sbjct: 775 EAFRLFDYLENSKMLPTIITYTILIGALCREGLLDDADQLFQKMSTKGIKPTTRVYNLLI 834
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G C +++++ MEEL PD T ++ LC E E + + I
Sbjct: 835 SGHCNFGLTGKALELMSHMEELFILPDCFTLGAIINGLCLKGETEAALRFFNEYRHRNID 894
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEE 371
+ + +I GL +KG + E+ G+L E
Sbjct: 895 PDFVGFMSLIKGLYAKGRMEESRGILRE 922
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+ +L K+ +V DA L + G D+ Y++V++G+ KA +L + +
Sbjct: 692 GAVFALKKQGEVLDACNFLKVAEQSGFSVDLTMYSIVVDGLCKGGYLEKALDLCEGMKKE 751
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G P++ +N ++GLC Q + ++ +E P +ITY L+ ALC+ L+
Sbjct: 752 GFQPNIVIHNSVLSGLCHQGCLTEAFRLFDYLENSKMLPTIITYTILIGALCREGLLDDA 811
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L ++M KGI + Y+++I G + G +A L+ + I G
Sbjct: 812 DQLFQKMSTKGIKPTTRVYNLLISGHCNFGLTGKALELMSHMEELFILPDCFTLGAIING 871
Query: 391 LCQRGLVRKALELLKQMADKDVSP 414
LC +G AL + +++ P
Sbjct: 872 LCLKGETEAALRFFNEYRHRNIDP 895
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 152/379 (40%), Gaps = 31/379 (8%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SL H P YH +I L + Q + D +K F + + LI+
Sbjct: 466 SLFHKMPEIGLRPNTITYHTIIDKLCKAEQVDKALELFDEYKKDAGFSSA-VVHECLIRA 524
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC--MINDGFCVDGKTCSLILSSVCEQR 183
+ + + +FY + + +I R F NC +I+ F G+ +L +C+
Sbjct: 525 LCNGGKVNMADQIFYDLVQKKI-RPNF----FNCRKLIHAHFKGHGEHS--VLDFICKVG 577
Query: 184 DLSSD---ELLGFVQE-MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG--- 236
+L D + + + K C +D ++R +L + +G
Sbjct: 578 ELDIDLFSSVCNYASAFLSKRNCCQAAMDAYKLLRIQAIAVSSKTCCKLLKSLHRNGNEE 637
Query: 237 -IKPDIVCYTMVLNGVI-----------VQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
I+P ++C + ++G++ + E + F + G VP V +
Sbjct: 638 VIQP-LLCDFIKIHGLLDLTMINMLSCYLSEKDISKTIWFSNYMDKGSVP-VSVLRGAVF 695
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
L KQ V + E+ G D+ Y+ ++ LCK L + +L + MK +G
Sbjct: 696 ALKKQGEVLDACNFLKVAEQSGFSVDLTMYSIVVDGLCKGGYLEKALDLCEGMKKEGFQP 755
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ ++ ++ GL +G + EA L + N + + I LC+ GL+ A +L
Sbjct: 756 NIVIHNSVLSGLCHQGCLTEAFRLFDYLENSKMLPTIITYTILIGALCREGLLDDADQLF 815
Query: 405 KQMADKDVSPGARVWEALL 423
++M+ K + P RV+ L+
Sbjct: 816 QKMSTKGIKPTTRVYNLLI 834
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L+ C + SSD L ++EM++ G +V + VI+ L K ++ ALG LN+M D
Sbjct: 351 LADACFKCRCSSDALR-LLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADD 409
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ PD++ Y +++ + KA L DE++ GL D +T N + LCK+ E
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ + G PD ++Y T++ A K L EM K + ++ TY+ +I G
Sbjct: 470 QGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKG 529
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L+ G + EA L E + KGL + ++ I C+ G + A + +M + P
Sbjct: 530 LSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKP 588
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 130/264 (49%), Gaps = 2/264 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ + A +++ M+ G +D T + +L ++C+++ +E G +Q + GF
Sbjct: 427 KAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRY--EEAQGLLQSPPQRGFMPD 484
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V Y V+ + K+ AL + ++M + P I Y ++ G+ +A + +
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
EL+ GLVPD TYN+ I+ CK+ ++E + M E KPDV+T NTL+ LC
Sbjct: 545 ELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNG 604
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L++ +L + KG +++ TY+ +I + GD+ A + +GL + ++
Sbjct: 605 KLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYN 664
Query: 386 ETICGLCQRGLVRKALELLKQMAD 409
+ L + G +A +L ++A+
Sbjct: 665 VVLSALSEAGRTEEAQNMLHKLAE 688
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 137/290 (47%), Gaps = 3/290 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF- 204
R+ + A +++ M +GF D T +++ + +C+ + DE EM++LG
Sbjct: 286 RLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKV--DEAFRLKDEMERLGTLLP 343
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y + + K DAL +L +M+ G+K +V + +V+ G+ + A
Sbjct: 344 DVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCL 403
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+++ GL PDV TYN I+ CK N+ ++ M G K D T NT+L LCK
Sbjct: 404 NKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKE 463
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ + L++ +G + + +Y ++ + + A L +E + K L S +
Sbjct: 464 KRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTY 523
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
+ I GL + G +++A++ L ++ +K + P + ++ + + D N
Sbjct: 524 NTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLEN 573
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 3/277 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ LN M +DG D T + ++ + C+ +++ L + EM + G V
Sbjct: 399 ALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTL--MDEMVRRGLKLDTFTLNTV 456
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +L K+++ +A G+L G PD V Y V+ + + A L+DE++ L
Sbjct: 457 LYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKL 516
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P + TYN I GL + ++ I + + E G PD TYN ++ A CK +L +
Sbjct: 517 TPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQ 576
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+M ++ T + +++GL G + +A L E + KG ++ I +C
Sbjct: 577 FHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMC 636
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ G V AL M + + P A + ++LS++S+
Sbjct: 637 KDGDVDTALHFFADMEARGLQPDAFTYN-VVLSALSE 672
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 1/255 (0%)
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+ + +LS++ S L + + L + ++ + K + DAL L
Sbjct: 168 QAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTL 227
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+ M+ G+ PD V Y +LN + +A L + G+ P TYN ++ +
Sbjct: 228 STMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARL 287
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL-NLQT 348
++ K++ M G +PD+ TYN L LC+ +++ L EM+ G +L ++ T
Sbjct: 288 GWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVT 347
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ + D +A LLEE KG+ + I GLC+ G + AL L +MA
Sbjct: 348 YNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMA 407
Query: 409 DKDVSPGARVWEALL 423
D ++P + L+
Sbjct: 408 DDGLAPDVITYNTLI 422
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 72/284 (25%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ R+ AI+ LN ++ G D T ++I+ + C++ DL
Sbjct: 532 RMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLE------------------- 572
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+A N+M + KPD+V ++NG+ + KA +LF+
Sbjct: 573 ------------------NAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFE 614
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G DV TYN I +CK +V+ + A ME G +PD TYN +L AL +
Sbjct: 615 SWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 674
Query: 326 ELNRLRELVKEMKWKGI------------------------------VLNLQ-----TYS 350
+ ++ ++ G V N Q Y+
Sbjct: 675 RTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYT 734
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+++GL + G EA +L+E + KG+ SS + + GL +R
Sbjct: 735 KLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKR 778
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A I M+ G D +L++ + C+ ++ D + +++M+K + +
Sbjct: 506 AFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNM--DRAIRILEKMQKERMQPSNRAFRPI 563
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + AL IL+ M+ G P ++ Y +++G+I + +A + +++ + G+
Sbjct: 564 IEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGI 623
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ +TY + + G ++ + ++E G K DV Y TLL+A CK +
Sbjct: 624 TPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALA 683
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ +EM + I N Y+I+IDG A +GD+ EA L+++ G+ + I C
Sbjct: 684 VTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACC 743
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G +++A ++ +M+D + P + + L+
Sbjct: 744 KAGDMQRAQTVIDEMSDVGLKPNLKTYTTLI 774
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 123/264 (46%), Gaps = 35/264 (13%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+ +K+ F ++ Y +I VK KV A+ I +M+S GIK + Y+M+++G I
Sbjct: 441 ERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHL 500
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE---------- 304
D+ A +F+E+L GL PD YN+ I CK N++ I+++ M++
Sbjct: 501 HDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAF 560
Query: 305 -------------------------LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
G P V+TYN L+ L + ++ R ++ +M
Sbjct: 561 RPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSI 620
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
GI N TY+I++ G A+ GDI +A + GL +++ + C+ G ++
Sbjct: 621 AGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQS 680
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL + ++M+ + ++ V+ L+
Sbjct: 681 ALAVTREMSSQKIARNTFVYNILI 704
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M++ G ++ Y +I L++K +V A+ +LN+M GI P+ YT+++ G D
Sbjct: 583 MRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGD 642
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA E F ++ GL DVY Y + CK +++ + + M + YN
Sbjct: 643 IAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNI 702
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ + ++ +L+K+MK G+ N+ TY+ I+ GD+ A +++E + G
Sbjct: 703 LIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVG 762
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
L + I G + L +AL+ ++M + P + L+ S +S+ + S
Sbjct: 763 LKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGS 822
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R N+V A+ +LN M G + T ++I+ D++ + + ++K+ G
Sbjct: 604 RKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIA--KAFEYFTKIKEGGLKLD 661
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++R+ K ++ AL + +M S I + Y ++++G + D +A +L
Sbjct: 662 VYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMK 721
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+++TY YIN CK +++ +I M ++G KP++ TY TL++ +
Sbjct: 722 QMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARAS 781
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
+R + +EMK G+ + Y ++ L S+ ++E
Sbjct: 782 LPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEG 821
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 145/353 (41%), Gaps = 21/353 (5%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P + +I A+ + +++ R E F+F L+ YA A +
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRAR-GIEPNAFVFTSLVHAYAVARDMRG-- 330
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
A+ M +G + T S+++S + D S + L F +
Sbjct: 331 ----------------ALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNL-FKEA 373
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
LG G++ Y+N+I + + + A ++++M+ DGI I Y +++G + +D
Sbjct: 374 KTNLGDLNGII-YSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQD 432
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
K +F+ L P + +Y IN K V I + ME G K + TY+
Sbjct: 433 EKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSM 492
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
L+ + + + +EM G+ + Y+++I+ G++ A +LE+ +
Sbjct: 493 LISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKER 552
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + F I G G +++AL++L M +P + AL+ + K
Sbjct: 553 MQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRK 605
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 4/232 (1%)
Query: 217 VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDV 276
K+ A M++ GI+P+ +T +++ V D A +E+ G+ +
Sbjct: 288 AKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTI 347
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
TY++ I+G K N+ ++ + + + I Y+ ++ A C+ ++R ELV E
Sbjct: 348 VTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHE 407
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR-G 395
M+ GI + Y M+ G D + C ++ E L + T S + + L + G
Sbjct: 408 MEEDGIDAPIDAYHSMMHGYTIIQD-EKKCLIVFERLKECCFTPSIISYGCLINLYVKIG 466
Query: 396 LVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
V KA+ + K+M + + + L+ + DF N R+ +++L +
Sbjct: 467 KVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNA--FRIFEEMLKS 516
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 171/372 (45%), Gaps = 25/372 (6%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
PPP+A Y+ VI L + + D V D E + P +I + T D H
Sbjct: 190 PPPDAFSYNVVIAGLWRSGKGSDALKVFD--EMVDMGVVPNWITYN---TMIDGHVKGGD 244
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+ GF + + M++DG + T +++LS +C + DE +
Sbjct: 245 L------------EAGFRLR--DQMLHDGPKPNIVTYNVLLSGLCRAGRM--DETRVLMD 288
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM Y+ + L + + L + + G+ +++LNG+
Sbjct: 289 EMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 348
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
KAE++ + L+ GLVP YN ING C+ ++ + M+ +PD ITYN
Sbjct: 349 KVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 408
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ LCK+ + + +LV EM+ G+ +++T++ +ID + G + + +L + K
Sbjct: 409 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
G+ + F + C+ G + +A+ +L M KDV+P A+V+ +++ + + D
Sbjct: 469 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD-TEQ 527
Query: 436 SFIRLVDQILNT 447
+F+ LV+++ N+
Sbjct: 528 AFL-LVEKMKNS 538
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + TCS++L+ +C+ ++ E + ++ + G V Y +I + +
Sbjct: 329 GVMLGAYTCSILLNGLCKDGKVAKAEQV--LEMLVHTGLVPTTVIYNTLINGYCQVRDLR 386
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A I QMKS I+PD + Y ++NG+ E KAE+L E+ G+ P V T+N I
Sbjct: 387 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 446
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ +E +++ M++ G K DVI++ ++++A CK ++ ++ +M +K +
Sbjct: 447 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 506
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N Q Y+ +ID GD +A L+E+ N G+ ++ + GLC+ + +A EL
Sbjct: 507 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 566
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLD 431
+ + ++ + P + ++ + +K D
Sbjct: 567 IYTLRNQGLRPDVVSYNTIISACCNKGD 594
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 120/225 (53%), Gaps = 10/225 (4%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ +M++ G ++ + +V+++ K K+ +A+ IL+ M + P+ Y +++ I
Sbjct: 462 LSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIE 521
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D +A L +++ G+ + TYN+ + GLC+ + ++ ++I + G +PDV++
Sbjct: 522 SGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 581
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNT++ A C + ++ EL++EM GI L+TY ++ LAS G + + L ++ L
Sbjct: 582 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQML 641
Query: 374 NKGLCTQSSMFDETICGLCQRGLVR-----KALELLKQMADKDVS 413
+K + SS++ G+ VR K L K+M++K ++
Sbjct: 642 HKNVEPSSSIY-----GIMVDAYVRCENDSKVASLKKEMSEKGIA 681
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 119/252 (47%), Gaps = 2/252 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + +++ +C+ ++ E L V EM+K G + + +I + ++
Sbjct: 403 DHITYNALINGLCKLEMVTKAEDL--VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 460
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L+ M+ GIK D++ + V+ +A + D+++ + P+ YN I+
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ + E ++ M+ G ++TYN LL+ LC+ +++ EL+ ++ +G+ ++
Sbjct: 521 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+Y+ +I +KGD +A LL+E G+ + + L G V L +QM
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640
Query: 408 ADKDVSPGARVW 419
K+V P + ++
Sbjct: 641 LHKNVEPSSSIY 652
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ IL+ MI + + + I+ + E D LL V++MK G +V Y +
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL--VEKMKNSGVSASIVTYNLL 550
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
++ L + ++ +A ++ +++ G++PD+V Y +++ + D KA EL E+ G+
Sbjct: 551 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 610
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P + TY+ ++ L V + M +P Y ++ A + +++
Sbjct: 611 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 670
Query: 333 LVKEMKWKGIVLN 345
L KEM KGI +
Sbjct: 671 LKKEMSEKGIAFD 683
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 172/385 (44%), Gaps = 30/385 (7%)
Query: 55 QQIPKQPHILSSLLHSFSIY-----NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKR 109
+Q+ K+ L H F ++ E E+YH ++ L + QF I L + +
Sbjct: 84 EQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMRET 143
Query: 110 ENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINR-VGFAIEILNCM-------- 160
E IF + + Y A+ D++ F+++ F + VG ++L +
Sbjct: 144 RCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQ 203
Query: 161 -------INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
+N + KT S+++ + D S E +EM++ G +V Y +++
Sbjct: 204 AQEFFDKVNVEVMPNAKTYSILMRGWGDVGD--SSEARKLFEEMRERGCAVDVVAYNSLL 261
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
+L K V +A + +M S+G+ PD Y++ + D A ++ D + LV
Sbjct: 262 EALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLV 321
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P+V+TYN + LCK V+ +++ M E G PD+ +YN + C E+N+ L
Sbjct: 322 PNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRL 381
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKG---DIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ M+ + + + TY++++ L G + + G +EE +G +S + + G
Sbjct: 382 ISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEE---RGFYPAASTYAVMVHG 438
Query: 391 LC-QRGLVRKALELLKQMADKDVSP 414
C ++G + +A + + M D + P
Sbjct: 439 FCKKKGKLEEACKYFEMMIDDGIPP 463
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 5/263 (1%)
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
LI + C + +L D + F Q M G G+ D ++ L K++ V A +++
Sbjct: 155 LIFRAYC-RANLPGDAIRAFHQ-MGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVN 212
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
+ + P+ Y++++ G D +A +LF+E+ G DV YN + LCK NV+
Sbjct: 213 VE-VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVD 271
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
K+ M G PD +Y+ ++A C+V +++ +++ M+ +V N+ TY+ ++
Sbjct: 272 EAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIV 331
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L + EA LL+E + +G+ ++ C V KAL L+ +M ++
Sbjct: 332 KKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCM 391
Query: 414 PGARVWEALL--LSSVSKLDFVN 434
P + +L L V + D V
Sbjct: 392 PDRHTYNMVLKMLLRVGRFDRVT 414
>gi|356574119|ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Glycine max]
Length = 942
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 162/361 (44%), Gaps = 27/361 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P ++ VI L +N Q D++ L + K+ I+ +LI + D++R ++S
Sbjct: 430 PNGASFSIVINGLLKNDQL-DLALSLFNDMKQFVDRPSVLIYNNLINSLCDSNRLEESRE 488
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
L ++ + + F T + I +C+++D+ LG + +
Sbjct: 489 LLREMKESGVEPTHF------------------TYNSIYGCLCKRKDV-----LGAIDML 525
Query: 198 KKLGFCFG---MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
K + C + + T +++ L +A L+ M G PDIV Y+ + G+I
Sbjct: 526 KGMRACGHEPWIKNSTLLVKELCDHGMAIEACNFLDSMVQQGFLPDIVSYSAAIGGLIQI 585
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
++ +A +LF +L G PDV N+ + GLCK V K++ + G P V+TY
Sbjct: 586 QELNRALQLFSDLYSRGHCPDVVASNILMRGLCKAYRVREAEKLLDEIVVKGFFPSVVTY 645
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N L+ + CK +++ L+ M + N+ TYS ++DG +A + E
Sbjct: 646 NLLIDSWCKNGSVDKAMALLSRMSGEDREPNVITYSTLVDGFCRAERPDDALLVWNEMER 705
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
KG F I GLC+ AL L++M KD+ P + ++ AL+ S +S +D +
Sbjct: 706 KGCFPNQIAFMALIYGLCKCCRPTTALHYLREMEQKDMKPDSFIYIALISSFLSDMDLAS 765
Query: 435 T 435
Sbjct: 766 A 766
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 259 KAEELFDELLVLGL-VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
+A LFDE+ + GL VP+ Y YN + L K V+ + M+ G + D T L
Sbjct: 155 EAHHLFDEMRLKGLCVPNDYCYNCLLEALSKSGEVDLIEARLEEMKGFGWEFDKFTLTPL 214
Query: 318 LQALCKVR----------------------------------ELNRLRELVKEMKWKGIV 343
LQA C R ++++ ELV+ M+ G+
Sbjct: 215 LQAYCNARRFDEALRVYNVMREKGWVDGHVCSMLALSFSKWGDVDKAFELVERMEGHGMR 274
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
LN +T+ ++I G +G + A L + G S+FD I GLC+ G +AL L
Sbjct: 275 LNEKTFCVLIHGFVKEGRVDRALQLFDIMCRVGFTPPVSLFDVLIGGLCRNGDSHRALSL 334
Query: 404 LKQMADKDVSPGARVWEALL 423
L +M + V+P ++ L+
Sbjct: 335 LSEMKEFGVTPDVGIFTKLI 354
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G+ D T + +L + C R DE L M++ G+ G V + + S K V
Sbjct: 203 GWEFDKFTLTPLLQAYCNARRF--DEALRVYNVMREKGWVDGHV-CSMLALSFSKWGDVD 259
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A ++ +M+ G++ + + ++++G + + +A +LFD + +G P V ++V I
Sbjct: 260 KAFELVERMEGHGMRLNEKTFCVLIHGFVKEGRVDRALQLFDIMCRVGFTPPVSLFDVLI 319
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
GLC+ + + +++ M+E G PDV + L+ A + +L E V + + +
Sbjct: 320 GGLCRNGDSHRALSLLSEMKEFGVTPDVGIFTKLISAFPDRGVIAKLLEEVPGGEEERTL 379
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLL 369
+ + Y+ ++ + G + EAC L
Sbjct: 380 VLI--YNAVLTCYVNDGLMDEACRFL 403
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 39/240 (16%)
Query: 164 GFCVDGKTC-SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
G CV C + +L ++ + ++ D + ++EMK G+ F T ++++ +
Sbjct: 167 GLCVPNDYCYNCLLEALSKSGEV--DLIEARLEEMKGFGWEFDKFTLTPLLQAYCNARRF 224
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
+AL + N M+ G VC + L+ D KA EL + + G+ + T+ V
Sbjct: 225 DEALRVYNVMREKGWVDGHVCSMLALS-FSKWGDVDKAFELVERMEGHGMRLNEKTFCVL 283
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
I+G K+ V+ +++ M +G P V
Sbjct: 284 IHGFVKEGRVDRALQLFDIMCRVGFTPPV------------------------------- 312
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
+ ++I GL GD A LL E G+ +F + I RG++ K LE
Sbjct: 313 ----SLFDVLIGGLCRNGDSHRALSLLSEMKEFGVTPDVGIFTKLISAFPDRGVIAKLLE 368
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGIL 229
T S ++ C R D+ L EM++ G CF + + +I L K + AL L
Sbjct: 679 TYSTLVDGFC--RAERPDDALLVWNEMERKG-CFPNQIAFMALIYGLCKCCRPTTALHYL 735
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV-----YIN 284
+M+ +KPD Y +++ + D A E+F E++ G P+ + N I+
Sbjct: 736 REMEQKDMKPDSFIYIALISSFLSDMDLASAFEIFKEMVYSGYFPESHDKNYSIVMDAID 795
Query: 285 GLCKQNNVEAGIKMIACMEE 304
K + +GI+++ MEE
Sbjct: 796 KFSKDHRTSSGIQVL--MEE 813
>gi|8778500|gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
Length = 554
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 141/319 (44%), Gaps = 20/319 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
N YH ++K AE ++ + ++D + K + + T F LI T +A +D
Sbjct: 224 NFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLLICTCGEAGLARD 282
Query: 135 SVNLFYKIPKFR-----------------INRVGFAIEILNCMINDGFCVDGKTCSLILS 177
V F K F + + + M+ DGF D T ++++
Sbjct: 283 VVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM- 341
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
R +D L + EM K GF + Y ++ L K AL +LN M+ G+
Sbjct: 342 -FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGV 400
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P ++ +T +++G+ + DE + +G PDV Y V I G +E +
Sbjct: 401 EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEE 460
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M M E G P+V TYN++++ C + L+KEM+ +G N YS +++ L
Sbjct: 461 MFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLK 520
Query: 358 SKGDIIEACGLLEEALNKG 376
+ G ++EA ++++ + KG
Sbjct: 521 NAGKVLEAHEVVKDMVEKG 539
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 132/270 (48%), Gaps = 6/270 (2%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+++ MI DG+ T +L++ + C + L+ D + F++ K + Y ++ S
Sbjct: 251 LIDEMIKDGYPTTACTFNLLICT-CGEAGLARDVVEQFIKS-KTFNYRPYKHSYNAILHS 308
Query: 216 L--VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
L VK+ K+ D + QM DG PD++ Y +V+ + L DE++ G
Sbjct: 309 LLGVKQYKLIDW--VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFS 366
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PD+YTYN+ ++ L N A + ++ M E+G +P VI + TL+ L + +L +
Sbjct: 367 PDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYF 426
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ E G ++ Y++MI G S G++ +A + +E KG ++ I G C
Sbjct: 427 MDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCM 486
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
G ++A LLK+M + +P V+ L+
Sbjct: 487 AGKFKEACALLKEMESRGCNPNFVVYSTLV 516
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 131/274 (47%), Gaps = 23/274 (8%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
+N P +Y+ ++ +L Q+ I V + + E+ TP+ + +++
Sbjct: 293 FNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM--LEDGFTPDVLTYNIVM--------- 341
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLG 192
FR+ + +L+ M+ DGF D T +++L + + L++ L
Sbjct: 342 --------FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAA---LN 390
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ M+++G G++ +T +I L + K+ +++ G PD+VCYT+++ G I
Sbjct: 391 LLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYI 450
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ KAEE+F E+ G +P+V+TYN I G C + ++ ME G P+ +
Sbjct: 451 SGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFV 510
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
Y+TL+ L ++ E+VK+M KG ++L
Sbjct: 511 VYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHL 544
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 116/209 (55%), Gaps = 10/209 (4%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT VI K +V A +L++MK G+K D++ ++ ++ G+ + + +E ++
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKG---RIDEALEQFK 58
Query: 269 VLG--LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL-----GSKPDVITYNTLLQAL 321
+G P+V TYN +NGLCK N ++ G+++ ME+ G +PDVI+Y+T++ AL
Sbjct: 59 SMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK + +++ E K M+ G N+ TYS +IDGL + EA LL + + + ++
Sbjct: 119 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRA 178
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADK 410
++ + G ++G + LELL M +K
Sbjct: 179 MYYNAVVNGFKRQGKPSECLELLLHMKEK 207
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 155/350 (44%), Gaps = 20/350 (5%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK--TYADAHRFQ 133
C P Y+ V+ L + ++ + + D +EKR +E D+I T DA
Sbjct: 64 CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKR--YEASHGCEPDVISYSTVIDALCKA 121
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
V+ Y+ K R+ VG A ++ T S ++ +C+ + DE
Sbjct: 122 QRVDKAYEYFK-RMRAVGCAPNVV-------------TYSSLIDGLCKVDRV--DEAYSL 165
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ ++K + Y V+ ++ K + L +L MK G +I+ + +L+ +
Sbjct: 166 LMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWK 225
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
++ KA + F+ LL G P+V TYNV ++GLCK V+ +++ M E PDVIT
Sbjct: 226 NDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVIT 285
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y++++ CK +++ ++ M + + T+ ++ G + EA + E+ +
Sbjct: 286 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 345
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
N G ++ + +C V ALE+ +M K P A + L+
Sbjct: 346 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLI 395
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 52/280 (18%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F + + K G +V Y + L K KV +A IL +M + PD++ Y+ +++G
Sbjct: 235 FFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294
Query: 253 VQEDYVKAEELFDELLV-----------------------------------LGLVPDVY 277
KA+++F ++V G +P +
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQ 354
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYNV ++ +C ++VE+ +++ M+ +PD TY L+Q LC+ R ++ +E + M
Sbjct: 355 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVM 414
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ +V N +++ L +G++ EAC +L+ + +C+ G
Sbjct: 415 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKAGEP 458
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+A+E+++QM K V P + A +L S+ LD V+++
Sbjct: 459 DEAVEVIEQMVLKGVRPDEATYVA-VLRSLCGLDRVDSAI 497
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT V+NG +A EL DE+ G+ DV ++ I GLC++ ++ ++ M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK-----GIVLNLQTYSIMIDGLAS 358
E S P+VITYNT++ LCK ++ EL +M+ + G ++ +YS +ID L
Sbjct: 62 EECS-PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+ +A + G + I GLC+ V +A LL Q+ +D+ P A
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180
Query: 419 WEALL 423
+ A++
Sbjct: 181 YNAVV 185
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y ING CK V+ +++ M+E G K DV+ ++TL+Q LC+ ++ E K M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE-----ALNKGLCTQSSMFDETICGLCQ 393
+ N+ TY+ +++GL I E L ++ + G + I LC+
Sbjct: 62 EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
V KA E K+M +P + + L+ + K+D V+ ++
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSS-LIDGLCKVDRVDEAY 163
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S E ++M GF G+ Y ++ + + V AL I ++MK +PD Y
Sbjct: 334 SREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAP 393
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE------------- 293
++ + +A+E D + +VP+ + + LCKQ V+
Sbjct: 394 LIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEIC 453
Query: 294 -AG-----IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
AG +++I M G +PD TY +L++LC + ++ ++M +G L
Sbjct: 454 KAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLV 513
Query: 348 TYSIMIDGLASKGDII-EACGLLEEALNKGLCTQS 381
TY+++I G A D+ +A + E + G Q+
Sbjct: 514 TYTLLI-GEACSADMADDAFRIFEAMVAAGFTPQA 547
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 125/240 (52%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ L + +K+ G V YT +I+ +K + A+ + N+M G D+V Y +
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L+G+ ++ +A++LF+E+ L PD YT + I+G CK N++ +++ M+E
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ DV+TYNTLL KV +++ +E+ +M K I+ +YSI+++ L SKG + EA
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
+ +E ++K + + + I G C+ G L++M + P + L+ V
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 150/323 (46%), Gaps = 19/323 (5%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCM 160
+F LI+TY A + +++ F + RI V A + +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
G ++ T +++++++C +D +++ F+ ++++ G +V Y +I + K
Sbjct: 227 SRSGVGINVYTLNIMVNALC--KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
+ +A ++N M G P + Y V+NG+ Y +A+E+F E+L GL PD TY
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+ CK+ +V K+ + M PD++ +++++ + L++ +K
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G++ + Y+I+I G KG I A L E L +G ++ + GLC+R ++ +A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 401 LELLKQMADKDVSPGARVWEALL 423
+L +M ++ + P + L+
Sbjct: 465 DKLFNEMTERALFPDSYTLTILI 487
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ M+ G D T +L C++ D+ E + +M+ +V ++++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV--FSDMRSRDVVPDLVCFSSM 381
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + + AL N +K G+ PD V YT+++ G + A L +E+L G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
DV TYN ++GLCK+ + K+ M E PD T L+ CK+ L E
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++MK K I L++ TY+ ++DG GDI A + + ++K + + + LC
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+G + +A + +M K++ P + +++
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E++N M GF T + +++ +C+ + + EM + G Y ++
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV--FAEMLRSGLSPDSTTYRSL 346
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ KK V + + + M+S + PD+VC++ +++ + KA F+ + GL
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PD Y + I G C++ + + + M + G DV+TYNT+L LCK + L +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L EM + + + T +I+IDG G++ A L ++ K + ++ + G
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ G + A E+ M K++ P + L+ + SK
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y+ ++ +L K + +A + ++M S IKP ++ ++ G + E ++
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE--LGSKPDVITYNTLLQALCKV 324
++ G VPD +YN I G ++ N+ ++ MEE G PDV TYN++L C+
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
++ ++++M +G+ + TY+ MI+G S+ ++ EA + +E L +G
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 147/302 (48%), Gaps = 6/302 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R + A+ + N M+ G +D T + IL +C+++ L + L EM +
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL--FNEMTERALFPD 479
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
T +I K + +A+ + +MK I+ D+V Y +L+G D A+E++
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ ++P +Y++ +N LC + ++ ++ M KP V+ N++++ C+
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE--EALNKGLCTQSSM 383
+ +++M +G V + +Y+ +I G + ++ +A GL++ E GL
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQ 443
++ + G C++ +++A +L++M ++ V+P + ++ VS+ + T R+ D+
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL--TEAFRIHDE 717
Query: 444 IL 445
+L
Sbjct: 718 ML 719
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 4/267 (1%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+G A ++ N M D T ++++ C+ +L + + Q+MK+ +V Y
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN--AMELFQKMKEKRIRLDVVTY 518
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++ K + A I M S I P + Y++++N + + +A ++DE++
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ P V N I G C+ N G + M G PD I+YNTL+ + +++
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 330 LRELVKEMKWK--GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
LVK+M+ + G+V ++ TY+ ++ G + + EA +L + + +G+ S +
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I G + + +A + +M + SP
Sbjct: 699 INGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A E F L G + N I L + VE + + G +V T N ++
Sbjct: 183 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 242
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
ALCK ++ ++ + +++ KG+ ++ TY+ +I +SKG + EA L+ KG
Sbjct: 243 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 302
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
++ I GLC+ G +A E+ +M +SP + + +LL+ + K D V T
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 2/258 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ N + G D ++++ C + +S + EM + G +V Y +
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV--AMNLRNEMLQQGCAMDVVTYNTI 451
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K++ + +A + N+M + PD T++++G + A ELF ++ +
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
DV TYN ++G K +++ ++ A M P I+Y+ L+ ALC L
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ EM K I + + MI G G+ + LE+ +++G ++ I G
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 393 QRGLVRKALELLKQMADK 410
+ + KA L+K+M ++
Sbjct: 632 REENMSKAFGLVKKMEEE 649
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
C+ ++ C + S E F+++M GF + Y +I V++E + A G++ +
Sbjct: 588 CNSMIKGYCRSGNASDGE--SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 232 MKSD--GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M+ + G+ PD+ Y +L+G Q +AE + +++ G+ PD TY ING Q
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Query: 290 NNVEAGIKMIACMEELGSKPD 310
+N+ ++ M + G PD
Sbjct: 706 DNLTEAFRIHDEMLQRGFSPD 726
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 86/200 (43%), Gaps = 23/200 (11%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P P +Y ++ L + V D + + N + I +IK Y + D +
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
K MI++GF D + + ++ + ++S + G V++M
Sbjct: 607 FLEK------------------MISEGFVPDCISYNTLIYGFVREENMS--KAFGLVKKM 646
Query: 198 K--KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+ + G + Y +++ ++ ++ +A +L +M G+ PD YT ++NG + Q+
Sbjct: 647 EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD 706
Query: 256 DYVKAEELFDELLVLGLVPD 275
+ +A + DE+L G PD
Sbjct: 707 NLTEAFRIHDEMLQRGFSPD 726
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 5/261 (1%)
Query: 149 RVGFA---IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ GFA E+ M G +D + ++++ C+ ++ L ++EMK GF
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL--LEEMKTKGFEPT 621
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +VI L K +++ +A + + KS I+ ++V Y+ +++G +A + +
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
EL+ GL P+VYT+N ++ L K + + M+EL P+ +TY L+ LCKVR
Sbjct: 682 ELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ N+ +EM+ +G+ + +Y+ MI GLA G+I EA L + G S+ ++
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 386 ETICGLCQRGLVRKALELLKQ 406
I GL A L ++
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEE 822
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 1/230 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT++I++ + D I M + PD+ ++ + + K +F+E+
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
VPD +Y++ I+GL K ++ M+E G D YN ++ CK ++N
Sbjct: 545 SRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ +L++EMK KG + TY +IDGLA + EA L EEA +K + ++ I
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
G + G + +A +L+++ K ++P W + LL ++ K + +N + +
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNVYTWNS-LLDALVKAEEINEALV 713
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 1/212 (0%)
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+ ++KS PD Y+++++G+I + ELF + G V D YN+ I+G
Sbjct: 538 AMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK V +++ M+ G +P V+TY +++ L K+ L+ L +E K K I LN+
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
YS +IDG G I EA +LEE + KGL ++ + L + + +AL +
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 717
Query: 407 MADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
M + +P +V +L++ + K+ N +F+
Sbjct: 718 MKELKCTPN-QVTYGILINGLCKVRKFNKAFV 748
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 119/279 (42%), Gaps = 5/279 (1%)
Query: 155 EILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIR 214
+IL M GF TC ++ S + L E VQ M+K F YT +I
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLSCVKANKLR--EGFDVVQNMRKFKFRPAFSAYTTLIG 176
Query: 215 SLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVP 274
+ L + QM+ G +P + +T ++ G + A L DE+ L
Sbjct: 177 AFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA 236
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D+ YNV I+ K V+ K +E G KPD +TY +++ LCK L+ E+
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+ ++ V Y+ MI G S G EA LLE KG ++ + L +
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356
Query: 395 GLVRKALELLKQMADKDVSPGARVWEAL--LLSSVSKLD 431
G V +AL + ++M KD +P + L +L KLD
Sbjct: 357 GKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLD 394
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 139/308 (45%), Gaps = 73/308 (23%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS------------ 234
SD +L Q+M++LG+ + +T +IR K+ +V AL +L++MKS
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 235 -----------------------DGIKPDIVCYTMVLNGVIVQEDYV-KAEELFDELLVL 270
+G+KPD V YT ++ GV+ + + + +A E+F+ L
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI-GVLCKANRLDEAVEMFEHLEKN 302
Query: 271 GLVPDVYTYNVYING------------LCKQNNVEAGIK-------MIACMEELG----- 306
VP Y YN I G L ++ + I ++ C+ ++G
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 307 ----------SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ P++ TYN L+ LC+ +L+ EL M+ G+ N++T +IM+D L
Sbjct: 363 LRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPG 415
+ EAC + E+ ++ +CT + F I GL + G V A ++ ++M D D
Sbjct: 423 CKSQKLDEACAIFEQ-MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTN 481
Query: 416 ARVWEALL 423
+ V+ +L+
Sbjct: 482 SIVYTSLI 489
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 142/331 (42%), Gaps = 27/331 (8%)
Query: 114 TPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINR-VGFAIEILN----CMINDG---- 164
T ++ LIK + + R +D +KI K +N+ +++LN CM G
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDG----HKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 165 ------------FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
F D ++ S+++ + + ++E MK+ G Y V
Sbjct: 536 GRAMFEEIKSRRFVPDARSYSILIHGLIKAG--FANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K KV A +L +MK+ G +P +V Y V++G+ + +A LF+E +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+V Y+ I+G K ++ ++ + + G P+V T+N+LL AL K E+N
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALV 713
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ MK N TY I+I+GL +A +E +G+ + + I GL
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + +A L + P + + A++
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 129/291 (44%), Gaps = 10/291 (3%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A E+ + M G + +T ++++ +C+ + L DE ++M
Sbjct: 389 RAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL--DEACAIFEQMDYKVCTPD 446
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ + ++I L K +V DA I +M + + + YT ++ +++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK---PDVITYNTLLQALC 322
+++ PD+ N Y++ + K E G M EE+ S+ PD +Y+ L+ L
Sbjct: 507 DMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF---EEIKSRRFVPDARSYSILIHGLI 563
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K N EL MK +G VL+ + Y+I+IDG G + +A LLEE KG
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ I GL + + +A L ++ K + ++ +L+ V ++D
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 141/321 (43%), Gaps = 20/321 (6%)
Query: 111 NFETPEFIFIDLIKTYADAHRFQDSVNLFYK----------------IPKF-RINRVGFA 153
+E +F LI+ +A R +++L + I F ++ +V A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
+ + + +G D T + ++ +C+ L DE + + ++K Y +I
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRL--DEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
K +A +L + ++ G P ++ Y +L + +A +F+E+
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK-DAA 374
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P++ TYN+ I+ LC+ ++ ++ M++ G P+V T N ++ LCK ++L+ +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAI 434
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
++M +K + T+ +IDGL G + +A + E+ L+ T S ++ I
Sbjct: 435 FEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 394 RGLVRKALELLKQMADKDVSP 414
G ++ K M +++ SP
Sbjct: 495 HGRKEDGHKIYKDMVNQNCSP 515
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 22/309 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L +S C AY+ VI + + +L+ + K + FE + +I
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGL 632
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A R ++ LF + + R+ + I + +I DGF G+
Sbjct: 633 AKIDRLDEAYMLF---EEAKSKRIELNVVIYSSLI-DGFGKVGRI--------------- 673
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE ++E+ + G + + +++ +LVK E++ +AL MK P+ V Y +
Sbjct: 674 -DEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGI 732
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG+ + KA + E+ G+ P +Y I+GL K N+ + + G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
PD YN +++ L L +E + +G+ ++ +T +++D L K D +E
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL-HKNDCLEQA 851
Query: 367 GLLEEALNK 375
++ L +
Sbjct: 852 AIVGAVLRE 860
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++++ +C+ R ++ F QEM+K G + YT +I L K + +A + +
Sbjct: 729 TYGILINGLCKVRKF--NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+ K++G PD CY ++ G+ + A LF+E GL T V ++ L K +
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKND 846
Query: 291 NVEAGIKMIACMEELG 306
+E + A + E G
Sbjct: 847 CLEQAAIVGAVLRETG 862
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 143/280 (51%), Gaps = 10/280 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD--YT 210
A++ N GF + ++ L+L + R+L+ F + + G + D +
Sbjct: 102 ALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNG-TVKLEDRFFN 160
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-V 269
++IRS K +++ + N MKS G+ P +V + +L ++ + A+ +FDE+L
Sbjct: 161 SLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLST 220
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G+ PD YT+N+ I G CK + V+ G + M PD++TYNTL+ LC+ ++N
Sbjct: 221 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNI 280
Query: 330 LRELVKEMKWKGIVLN--LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+V M K LN + TY+ ++ G K +I EA + EE ++KGL ++
Sbjct: 281 AHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTL 340
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
I GLC+ V+K ++ +KQ+ + + G + + L+++
Sbjct: 341 IKGLCE---VQK-IDKIKQIFEGALGGGGFIPDTCTLNTL 376
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 168/409 (41%), Gaps = 70/409 (17%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKREN--FETPEFIFIDLIKTYADAHRFQDSVNL 138
++Y +++ L + L I++R N + + F LI++Y A FQ+SV +
Sbjct: 119 QSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQV 178
Query: 139 FYKIPKFRIN-----------------RVGFAIEILNCMIND-GFCVDGKTCSLILSSVC 180
F + ++ R A + + M++ G D T ++++ C
Sbjct: 179 FNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFC 238
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM--KSDGIK 238
++ DE F +EM + +V Y ++ L + KV A ++N M KS +
Sbjct: 239 --KNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLN 296
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK---------- 288
PD+V YT ++ G ++ + +A +F+E++ GL P+ TYN I GLC+
Sbjct: 297 PDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQI 356
Query: 289 --------------------------QNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
N+ +++ M L +PD TY+ L++ LC
Sbjct: 357 FEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLC 416
Query: 323 KVRELNRLRELVKEMKWKGIVLN-------LQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+ R +L E+ K I+L + Y M + L G +A + + + +
Sbjct: 417 QRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKR 476
Query: 376 GLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G TQ + F I G C+ G ELL M +D P +++L+
Sbjct: 477 G--TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLI 523
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 150/349 (42%), Gaps = 28/349 (8%)
Query: 72 SIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAH 130
S + C+P Y+ ++ L + +V++ + K+ P+ + + L++ Y H
Sbjct: 254 SRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKH 313
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
+++ +F + M++ G + T + ++ +CE + + +
Sbjct: 314 EIDEALVVFEE------------------MVSKGLKPNEITYNTLIKGLCEVQKIDKIKQ 355
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ F + GF ++ + + DAL + +M ++PD Y++++
Sbjct: 356 I-FEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRN 414
Query: 251 VIVQEDYVKAEELFDEL----LVL---GLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+ + ++ +AE+LFDEL ++L G P V Y LC+ ++ +
Sbjct: 415 LCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLM 474
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ G++ D +++ L++ C+ EL+ M + V +L+TY +IDGL KG+ +
Sbjct: 475 KRGTQ-DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPL 533
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
A LE+ + ++S F + L +G ++ + M + +
Sbjct: 534 VAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKI 582
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 145/322 (45%), Gaps = 24/322 (7%)
Query: 122 LIKTYADAHRFQDSVNLFYKIP--------------------KFRINRVGFAIEILNCMI 161
LIK Y D HR +D++ L ++P + RI V +E + +
Sbjct: 308 LIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKM--LK 365
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
+ D T + + + + DE L F++E ++ F V Y+ ++ S ++ +
Sbjct: 366 DSNLLPDQVTYNTFVHMLSKHG--HGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 423
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ A I+N+M S G PD+V YT V+NG+ + +A+++ ++ G P+ +Y
Sbjct: 424 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 483
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
+NGLCK N +M+ EE P+ ITY+ L+ + + + +LV+EM KG
Sbjct: 484 LLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 543
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
+++I L + + EA +E+ LN G F I G CQ+ + AL
Sbjct: 544 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 603
Query: 402 ELLKQMADKDVSPGARVWEALL 423
LL M + P + ++
Sbjct: 604 SLLDDMYLSNKHPDVVTYTTII 625
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 161/363 (44%), Gaps = 23/363 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ C P +Y+ V+ L + + ++ +++ + K N P+ + +
Sbjct: 324 LIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNL-LPDQVTYNTFVHM 382
Query: 127 ADAHRFQDSVNLFYKIP---KFRINRVGF---------------AIEILNCMINDGFCVD 168
H D F + +FR+++VG+ A EI+N M + G D
Sbjct: 383 LSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPD 442
Query: 169 GKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T + +++ +C++R + D+ +++M K G V YT ++ L K +A +
Sbjct: 443 VVTYTSVINGLCQERKV--DQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREM 500
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+N + D P+ + Y+++++G + +A +L E++ G P N+ I LC+
Sbjct: 501 MNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQ 560
Query: 289 QNNV-EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ V EA M C+ G +V+ + T++ C+ +L L+ +M ++
Sbjct: 561 EEKVDEAKRFMEQCLNN-GCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVV 619
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ +ID L KG I EA L + L GL + I C+ G V L+LL++M
Sbjct: 620 TYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM 679
Query: 408 ADK 410
+
Sbjct: 680 LSR 682
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 134/280 (47%), Gaps = 5/280 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A+ +L M G D C+ + + L D+ + F++ M+ +
Sbjct: 244 RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRL--DKAVRFLERMQIVEIEPN 301
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y +I+ ++ DA+ ++ +M G PD + Y V+ G + +E +K L
Sbjct: 302 VITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVM-GFLCKEKRIKEVRLLM 360
Query: 266 ELLV--LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
E ++ L+PD TYN +++ L K + + ++ + EE + D + Y+ ++ + C+
Sbjct: 361 EKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCR 420
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+++ +E+V EM KG + ++ TY+ +I+GL + + +A +L + G +
Sbjct: 421 EGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVS 480
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + GLC+ G +A E++ + P A + L+
Sbjct: 481 YTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLM 520
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 8/224 (3%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
F + MV Y+ + K+ +A+ +L M+ GI+PD+ ++ +++ KA
Sbjct: 234 AFGYVMVSYS-------RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKA 286
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ + ++ + P+V TYN I G C + +E +++IA M G PD I+Y T++
Sbjct: 287 VRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGF 346
Query: 321 LCKVRELNRLRELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK + + +R L+++M K ++ + TY+ + L+ G EA L EA +
Sbjct: 347 LCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 406
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + C+ G + KA E++ +M K P + +++
Sbjct: 407 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVI 450
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 134/294 (45%), Gaps = 23/294 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+L + C+P +Y ++ L +N + +++ E E++ P I ++
Sbjct: 465 MLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSE--EDWWIPNAITYSVL--- 519
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
H F+ R + A +++ MI GF +L++ S+C++ +
Sbjct: 520 --MHGFR------------REGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV- 564
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE F+++ G +V++T VI +K+ + AL +L+ M PD+V YT
Sbjct: 565 -DEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTT 623
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ + + +A +L ++L +GL+P TY I+ C+ VE +K++ M L
Sbjct: 624 IIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM--LS 681
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ YN +++ LC L + +L+ ++ ++ T ++I+ SKG
Sbjct: 682 RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKG 735
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 157/336 (46%), Gaps = 31/336 (9%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL--NCMIND------------ 163
+F L+K Y R ++ + F R+ RVGF ++ N ++N
Sbjct: 235 VFDMLVKAYLRMGRVREGLRSFR-----RMLRVGFVPTVITSNYLLNGLLKLNYTDRCWE 289
Query: 164 --------GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
G + T +++ +C+ D + ++ F+++M++ GF +V Y +I S
Sbjct: 290 VYEEMERFGIAPNLYTFNILTHVLCKDGD--TGKVNKFLEKMEEEGFDPDIVTYNTLINS 347
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+K ++ DA + M G+ PD+V YT ++NG+ + +A +LF ++ GL PD
Sbjct: 348 YCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPD 407
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ TYN I+G CK+ ++ ++ M G PD T L++ K + LV
Sbjct: 408 IVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVV 467
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
E++ G+ ++ YS +I L + A LLE G + +++E I CQ
Sbjct: 468 ELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCD 527
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL--LSSVSK 429
+ +AL L +M DK++ P + A+J LS +S+
Sbjct: 528 CIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSR 563
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 126/243 (51%), Gaps = 6/243 (2%)
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFC-----FGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+CE +L D+L G K L C + V + ++++ ++ +V + L +M
Sbjct: 202 LCELVELVKDDLPG-EDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRML 260
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G P ++ +LNG++ + E+++E+ G+ P++YT+N+ + LCK +
Sbjct: 261 RVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTG 320
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
K + MEE G PD++TYNTL+ + C+ L+ L K M +G+V +L +Y+ ++
Sbjct: 321 KVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALM 380
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+GL +G + EA L +++GL ++ I G C+ G ++++ LL M +S
Sbjct: 381 NGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGIS 440
Query: 414 PGA 416
P +
Sbjct: 441 PDS 443
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 143/351 (40%), Gaps = 41/351 (11%)
Query: 124 KTYADAHRFQDSVNLF-YKIPKFRINR---VGFAIEILNCMINDGFCVDGKTCSLILSSV 179
+ Y + RF + NL+ + I + + G + L M +GF D T + +++S
Sbjct: 289 EVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSY 348
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C + L D+ + M + G +V YT ++ L K+ +V +A + ++M G+ P
Sbjct: 349 CRKGRL--DDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSP 406
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT--------------------- 278
DIV Y +++G + ++ L +++ G+ PD +T
Sbjct: 407 DIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLV 466
Query: 279 --------------YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
Y+ I LC++N A ++ M + G K ++ YN L+++ C+
Sbjct: 467 VELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQC 526
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ L EM K I NL TY +J L+ +E L+ E + G +
Sbjct: 527 DCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEIC 586
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
G C+ + KA LL A + + AL+ + +K D +
Sbjct: 587 RALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARS 637
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 101/222 (45%), Gaps = 2/222 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L+ MI +G D TC +++ ++ S L V E+++ G Y+ +I +
Sbjct: 430 LLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSA--LNLVVELQRFGVSISQDIYSYLIVA 487
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L ++ + F A +L +M DG K ++ Y ++ + +A L E++ + P+
Sbjct: 488 LCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPN 547
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ TY J L + + G ++ M G PD+ L C+ ++++ L+
Sbjct: 548 LATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLS 607
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ + + ++++ +I ++KGDI + + + L GL
Sbjct: 608 FXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGL 649
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 103/236 (43%), Gaps = 22/236 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC- 180
L++ Y +F ++NL ++ +F G + S ++ ++C
Sbjct: 449 LVEGYGKEGKFLSALNLVVELQRF------------------GVSISQDIYSYLIVALCR 490
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
E R ++ LL + M + G + Y +I+S + + + +AL + +M IKP+
Sbjct: 491 ENRPFAAKNLL---ERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPN 547
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA 300
+ Y VJ + ++ E L E++ G +PD+ G C++N+++ +++
Sbjct: 548 LATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLS 607
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ D ++N L++ ++ R E+ M G++ N T +IDGL
Sbjct: 608 FXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGL 663
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 52/237 (21%)
Query: 223 FDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
F AL N +K+D G++P Y ++++ + ++ +A + EL+ L + D+ +V
Sbjct: 160 FTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVEL-VKDDLPGEDV 218
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA---LCKVRE------------ 326
+ N +I C E+ P + ++ L++A + +VRE
Sbjct: 219 FKN-------------LILCTEDCNWDP--VVFDMLVKAYLRMGRVREGLRSFRRMLRVG 263
Query: 327 --------------------LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
+R E+ +EM+ GI NL T++I+ L GD +
Sbjct: 264 FVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVN 323
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LE+ +G ++ I C++G + A L K M + V P + AL+
Sbjct: 324 KFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALM 380
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 132/289 (45%), Gaps = 37/289 (12%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L M +GF + + +L+ E RD ++ L F +K G Y +++
Sbjct: 144 LLAQMEEEGFQGNLGLYTTVLNGFAEIRD--EEKCLSFFHRLKACGLSPTAATYGCIVKL 201
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K + AL IL +M G+ P+ + Y M+++G D+ A +++++++ GL PD
Sbjct: 202 FTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPD 261
Query: 276 VYTYNVYINGLCKQ-----------------------------------NNVEAGIKMIA 300
+ YN+ ++ CK N++ +++
Sbjct: 262 IVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFD 321
Query: 301 CMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
++ G +P V++YN+LL L K R++ R ++ EM G+V N ++Y+ + +G A G
Sbjct: 322 RIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAG 381
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
D+ +A G+ + + L + + C+ G +++A E+ +Q+ D
Sbjct: 382 DVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITD 430
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 154/366 (42%), Gaps = 21/366 (5%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
S H P Y ++K + +L+ ++K + I+ ++
Sbjct: 178 SFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKH-GVSPNKMIYAMIMDG 236
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
YA F A ++ M++ G D ++++ + C+ +
Sbjct: 237 YARGGDFTA------------------AFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRM 278
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
D+ LG ++ ++ + YT+++ VK + AL + +++K+ G++P +V Y
Sbjct: 279 --DKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYN 336
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
+L+G+ A + +E+L G+VP+ +Y G + +VE M M++
Sbjct: 337 SLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE 396
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
D++ Y LL+A CK + R E+ +++ G+ N TY M+DG A KG++ +A
Sbjct: 397 NLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKA 456
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
LL + G + + I + G + E L M +K + AR + L+
Sbjct: 457 RDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHG 516
Query: 426 SVSKLD 431
++ D
Sbjct: 517 WLAAAD 522
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 139/364 (38%), Gaps = 67/364 (18%)
Query: 104 DHIEKRENFETPE--------FIFIDLIKTYADAHRFQDSVNLFYKI--PKFRINRVGFA 153
D + R FE I+ LI YA+A + +V ++ ++N F
Sbjct: 32 DKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVF- 90
Query: 154 IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
C I G+ G +++ + ++ K G + Y +++
Sbjct: 91 -----CSIISGYASAG----------------NNEAAEHWFEKFKAENLVPGGIVYNSIV 129
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
++ + + +L QM+ +G + ++ YT VLNG D K F L GL
Sbjct: 130 QAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLS 189
Query: 274 PDVYTYN--------------------------------VY---INGLCKQNNVEAGIKM 298
P TY +Y ++G + + A K+
Sbjct: 190 PTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKV 249
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M G KPD++ YN L+ A CK +++ +++ ++ ++ ++TY+ ++DG
Sbjct: 250 WEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVK 309
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G+I +A + + GL ++ + GL + + A +L +M V P R
Sbjct: 310 GGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERS 369
Query: 419 WEAL 422
+ AL
Sbjct: 370 YTAL 373
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 109/250 (43%), Gaps = 35/250 (14%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT++I + + + A+ +M S GI+ + + +++G + AE F++
Sbjct: 55 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 114
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE-- 326
LVP YN + C+ N+E ++A MEE G + ++ Y T+L ++R+
Sbjct: 115 AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEE 174
Query: 327 -----LNRLR----------------------------ELVKEMKWKGIVLNLQTYSIMI 353
+RL+ ++++EM G+ N Y++++
Sbjct: 175 KCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIM 234
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
DG A GD A + E+ ++ GL +++ + C+ G + KAL +L+ + +
Sbjct: 235 DGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLL 294
Query: 414 PGARVWEALL 423
P + ++L
Sbjct: 295 PTIETYTSIL 304
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A M++ IKP++ YT +++ D A +E+L G+ + + I+
Sbjct: 36 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 95
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G N EA + P I YN+++QA C+ + + L+ +M+ +G
Sbjct: 96 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 155
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
NL Y+ +++G A D + GL ++ + + + G + KAL++L
Sbjct: 156 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDIL 215
Query: 405 KQMADKDVSPGARVWEALLLSSVSKLDFV 433
++M VSP ++ ++ DF
Sbjct: 216 EEMDKHGVSPNKMIYAMIMDGYARGGDFT 244
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 5/259 (1%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC 159
+S+LD K N + +F D IKT +L + K R ++ A +LN
Sbjct: 301 TSILDGYVKGGNIQKALEVF-DRIKTAGLRPGVVSYNSLLSGLAKAR--QMENARLMLNE 357
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ +G + ++ + + D+ ++ G Q MKK +V Y ++++ K
Sbjct: 358 MLANGVVPNERSYTALTEGYARAGDV--EKAFGMFQRMKKENLAIDIVAYGALLKACCKS 415
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ A + Q+ G+K + + Y +L+G + + KA +L +++ G D Y
Sbjct: 416 GAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICY 475
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+I + + E + +A M E + + TY TL+ + ++ ++ K
Sbjct: 476 TSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKA 535
Query: 340 KGIVLNLQTYSIMIDGLAS 358
G+ L+ + ++ GL S
Sbjct: 536 SGLQLDSALSNCLLSGLIS 554
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P + Y + ++ + + A M KP+V Y +L+ A + R++
Sbjct: 15 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 74
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+EM +GI LN + +I G AS G+ A E+ + L +++ + CQ
Sbjct: 75 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 134
Query: 394 RGLVRKALELLKQMADK 410
G + LL QM ++
Sbjct: 135 AGNMETVEALLAQMEEE 151
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 38/259 (14%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI---LNQMKSDGIKPDIVCYTMVLNG 250
+++K G + Y ++I KK + + L +M GI P V + +++NG
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ A +F+E+ G+ V TYN I+GLC + VE G+K++ ME+LG P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 311 VITYNTLLQALCK--------------------------------VRELNRLREL--VKE 336
IT+ +L+ CK R L ++ + VKE
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393
Query: 337 -MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M KGI N+ TY+ +I G + GD A GLL+E KG+ ++ I LC +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 396 LVRKALELLKQMADKDVSP 414
VRKA++LL +M++ + P
Sbjct: 454 EVRKAVKLLDEMSEVGLEP 472
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 123/252 (48%), Gaps = 2/252 (0%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L M+ G T ++++ C+ + ++ + +EMK+ G +V Y ++I
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAA--AVRVFEEMKQQGIAASVVTYNSLISG 308
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L + KV + + ++ +M+ G+ P+ + + VL G + A + D + + PD
Sbjct: 309 LCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPD 368
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V Y + I+G + +E + + M + G P+V TYN L+ + + L+
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EMK KGI ++ TY+++I L KG++ +A LL+E GL ++ I G C +G
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Query: 396 LVRKALELLKQM 407
++ A E+ +M
Sbjct: 489 NIKSAYEIRTRM 500
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V YT +I + K+ DA+ + M GI P++ Y ++ G D+ A L D
Sbjct: 369 VVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLD 428
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G+ DV TYNV I LC + V +K++ M E+G +P+ +TYNT++Q C
Sbjct: 429 EMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKG 488
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ E+ M+ N+ TY++ I G + EA LL E L+K L ++
Sbjct: 489 NIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYE 548
Query: 386 ETICGLCQRG 395
G+ ++G
Sbjct: 549 TIKEGMMEKG 558
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 3/190 (1%)
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ---NNVE 293
+ PDI + V++G+ KA ++ ++ GL P V TYN I+G CK+ N+
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
++ M E G P +T+ L+ CK + +EMK +GI ++ TY+ +I
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
GL S+G + E L+EE + GL F + G C++G++ A + + M +++V
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366
Query: 414 PGARVWEALL 423
P ++ L+
Sbjct: 367 PDVVIYTILI 376
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 93/173 (53%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
++ + + M K G + Y +I + A G+L++MK GI+ D+V Y ++
Sbjct: 386 EDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVL 445
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ + + + KA +L DE+ +GL P+ TYN I G C + N+++ ++ ME+
Sbjct: 446 IGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ +V+TYN ++ C++ +++ +L+ EM K +V N TY + +G+ KG
Sbjct: 506 RANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 3/180 (1%)
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P +L G++ + AE+ F L + PD+YT+N I+GLC+ +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 298 MIACMEELGSKPDVITYNTLLQALCK---VRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ G P V TYN+L+ CK + + L+KEM GI T+ ++I+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G + A + EE +G+ ++ I GLC G V + ++L+++M D +SP
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P + N + GL V+ K PD+ T+NT++ LC++ +L + ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASK---GDIIEACGLLEEALNKGLCTQSSMFDETICG 390
K++K G+ ++ TY+ +IDG K G++ LL+E + G+ + F I G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C+ A+ + ++M + ++ + +L+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 118/219 (53%), Gaps = 4/219 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ ++IRS + +++ + MKS + P +V + +++ ++ + A+E++DE+L
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210
Query: 269 -VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ PD TYNV I G CK + V+ G + ME DV+TYNTL+ LC+ ++
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKV 270
Query: 328 NRLRELVKEM--KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
R LV M K +G+ N+ TY+ +I G K ++ EA +LEE ++GL ++
Sbjct: 271 RIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYN 330
Query: 386 ETICGLCQRGLVRKALELLKQM-ADKDVSPGARVWEALL 423
+ GLC+ + K ++L++M +D SP + ++
Sbjct: 331 TLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTII 369
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 176/409 (43%), Gaps = 68/409 (16%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEK--RENFETPEFIFIDLIKTYADAHRFQDSVN 137
PE+Y +++ L + L IEK + + + F LI++YA+A F++S+
Sbjct: 110 PESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMK 169
Query: 138 LFYKIPKFRIN-----------------RVGFAIEILNCMIND-GFCVDGKTCSLILSSV 179
LF + ++ R A E+ + M+ G D T ++++
Sbjct: 170 LFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGF 229
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM--KSDGI 237
C ++ DE F +EM+ +V Y ++ L + KV A ++N M K +G+
Sbjct: 230 C--KNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGL 287
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN------- 290
P++V YT ++ G ++++ +A + +E+ GL P++ TYN + GLC+ +
Sbjct: 288 NPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKD 347
Query: 291 -----------------------------NVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
N++ +K+ M++ D +Y+TL+++L
Sbjct: 348 VLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSL 407
Query: 322 CKVRELNRLRELVKEMKWKGIVLN-------LQTYSIMIDGLASKGDIIEACGLLEEALN 374
C+ + + +L E+ K I+L+ +Y+ + + L G +A ++ + +
Sbjct: 408 CQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMK 467
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+G S + I G C+ G ELL M +D P +++ L+
Sbjct: 468 RGTQDPQS-YTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLI 515
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 130/288 (45%), Gaps = 13/288 (4%)
Query: 146 RINRVGFAIEILNCMIN--DGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
R +V A ++N M +G + T + ++ C ++++ +E L ++EM G
Sbjct: 266 RAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEV--EEALVVLEEMTSRGLK 323
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEE 262
M+ Y +++ L + K+ +L +MKSD G PD + +++ + +A +
Sbjct: 324 PNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALK 383
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI-------ACMEELGSKPDVITYN 315
+F+ + + D +Y+ I LC++ + + ++ + + GSKP +YN
Sbjct: 384 VFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYN 443
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+ ++LC+ + + +++++ +G + Q+Y+ +I G +G LL L +
Sbjct: 444 PIFESLCEHGKTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYESGYELLMWMLRR 502
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++D I G Q+ A E L++M P W ++L
Sbjct: 503 DFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVL 550
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 11/268 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK-LGFCFGMVDYTN 211
A+ +L M + G + T + ++ +CE L D++ ++ MK GF +
Sbjct: 310 ALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKL--DKMKDVLERMKSDGGFSPDTFTFNT 367
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL--- 268
+I + +AL + MK I D Y+ ++ + + DY AE+LFDEL
Sbjct: 368 IIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKE 427
Query: 269 ----VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
G P +YN LC+ + ++I + + G++ D +Y T++ CK
Sbjct: 428 ILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGHCKE 486
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
EL+ M + + +++ Y +IDG K + A LE+ L ++S +
Sbjct: 487 GAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTW 546
Query: 385 DETICGLCQRGLVRKALELLKQMADKDV 412
+ L ++G ++ ++ M +K+V
Sbjct: 547 HSVLAKLLEKGCAHESSCVIVMMLEKNV 574
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y+ ++K L E + + VL+ ++ F F F +I + A +++
Sbjct: 323 KPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEAL 382
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG---F 193
+F + KFRI D + S ++ S+C++ D E L F
Sbjct: 383 KVFESMKKFRIP------------------ADSASYSTLIRSLCQKGDYDMAEQLFDELF 424
Query: 194 VQE--MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+E + K G Y + SL + K A ++ Q+ G + D YT V+ G
Sbjct: 425 EKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTVIMGH 483
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ Y EL +L +PD+ Y+ I+G +++ + + M + +P
Sbjct: 484 CKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKT 543
Query: 312 ITYNTLLQAL 321
T++++L L
Sbjct: 544 STWHSVLAKL 553
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 11/258 (4%)
Query: 155 EILNCMINDG-FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVI 213
++L M +DG F D T + I+ C +L DE L + MKK Y+ +I
Sbjct: 347 DVLERMKSDGGFSPDTFTFNTIIHLHCCAGNL--DEALKVFESMKKFRIPADSASYSTLI 404
Query: 214 RSLVKK------EKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
RSL +K E++FD L + S G KP Y + + KAE + +
Sbjct: 405 RSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQ 464
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
L+ G D +Y I G CK+ E+G +++ M PD+ Y+ L+ + +
Sbjct: 465 LMKRG-TQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDK 523
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+E +++M T+ ++ L KG E+ ++ L K + ++ E
Sbjct: 524 PLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTE 583
Query: 387 TICGLCQRGLVRKALELL 404
++ L R +A E++
Sbjct: 584 SLQLLFGREQHERAFEII 601
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 97/161 (60%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+FD+++ GL+PDV N + L +N + + ME+ G KP V+TYNT+L + C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K +++ EL+ EM+ +G N TY+++++GL+ KG++ +A GL+EE LN GL +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I G CQ+GL +A +L+++M ++ P + L+
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLM 327
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 177/395 (44%), Gaps = 34/395 (8%)
Query: 51 TKQQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE 110
+ Q + PH+ +LHS I P A F +A+
Sbjct: 75 SDQFGAVITDPHLFIRVLHSMRI----RPRVALRFFRWVMAQ-----------------P 113
Query: 111 NFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVG--------FAIEILNCMIN 162
+F+ EF+F ++ + + ++ F ++ V + + + MI
Sbjct: 114 DFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIR 173
Query: 163 DGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
+G D K C+ IL + ++ LS + + G M++ G +V Y ++ S K+ +
Sbjct: 174 NGLLPDVKNCNRILRVLRDENLLSKAKNVYGM---MEQFGIKPTVVTYNTMLDSYCKEGR 230
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V AL +L++M+ G P+ V Y +++NG+ + + +A+ L +E+L GL YTYN
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
ING C++ ++ M + P + TYNTL+ LCK ++ +R +M
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
++ +++ ++ G G I EA L +E + L ++ I GLC G + AL
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410
Query: 402 ELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS 436
L K+M D+ + P + +L++ KL +V+ +
Sbjct: 411 RLKKEMTDQGLFPDIFTY-TILVNGCFKLGYVSMA 444
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D L +EM G + YT ++ K V A G N+M S G+KPD Y
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G + D A + +E+L G PDV TYNV+++ LC+Q N E ++ M G
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD +TY +++ K L + RE+ EM KG+ ++ TY+++I A+K + A
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS 426
+ L K + ++ I GLC + +A + +M +K + P + L+ S
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINES 645
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 118/251 (47%), Gaps = 2/251 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+M K F +V + +++ + + +A + +++K + P ++ Y +++G+ +
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
A L E+ GL PD++TY + +NG K V M G KPD Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
NT + K+ + + + +EM G ++ TY++ + L +G+ EAC LLE ++
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK--LDF 432
GL + I G + G +RKA E+ +M K V+P + L+ + +K LD
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDL 583
Query: 433 VNTSFIRLVDQ 443
F +++++
Sbjct: 584 AFMYFSKMLEK 594
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F++ V A N M++ G D + + V E + + +EM GF
Sbjct: 436 FKLGYVSMARGFFNEMLSKGLKPDRFAYNTRI--VGEMKIADTSVAFSMQEEMLAAGFPP 493
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ Y + +L ++ +A +L M SDG+ PD V YT ++NG + KA E+F
Sbjct: 494 DVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVF 553
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+E+L G+ P V TY V I+ + ++ + M E +VITYN ++ LC
Sbjct: 554 NEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMT 613
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
R ++ + EM+ KGI+ N +Y+I+I+ + G EA L E L++
Sbjct: 614 RRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR 664
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ F D + + +L C +S LL E+K ++ Y +I L
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLL--FDELKCRDLVPTVITYNTLIHGLCMW 403
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ AL + +M G+ PDI YT+++NG A F+E+L GL PD + Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N I G K + M M G PDVITYN + ALC+ +L++ M
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G++ + TY+ +I+G G + +A + E L+KG+ + I + ++
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDL 583
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A +M +K V + A++
Sbjct: 584 AFMYFSKMLEKSVPANVITYNAII 607
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%)
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
GF EM G Y I +K A + +M + G PD++ Y + ++ +
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
Q ++ +A +L + ++ GL+PD TY ING K ++ ++ M G P V
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TY L+ A + L+ +M K + N+ TY+ +I+GL + EA +E
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
KG+ + I C G +AL L ++M D+ + P +
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLG 201
+ + +I A + M+ GF D T ++ + ++C+Q + +E ++ M G
Sbjct: 468 VGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNF--EEACDLLENMVSDG 525
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
V YT++I VK + A + N+M S G+ P +V YT++++ ++ A
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF 585
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
F ++L + +V TYN INGLC ++ K MEE G P+ +Y L+
Sbjct: 586 MYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINES 645
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
C + L +EM + I + T+S+ + L
Sbjct: 646 CNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ N M++ G T ++++ + ++ L D + +M + ++ Y +
Sbjct: 549 AREVFNEMLSKGVAPSVVTYTVLIHAHAAKQML--DLAFMYFSKMLEKSVPANVITYNAI 606
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L ++ +A ++M+ GI P+ YT+++N + +A L+ E+L +
Sbjct: 607 INGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKI 666
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
PD +T++V++ L + V A + C+E L
Sbjct: 667 QPDSFTHSVFLKNLHRDYQVHA----VQCVESL 695
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 146/312 (46%), Gaps = 38/312 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF--GMVDYT 210
AI +L M G D T + ++ + + L DE + ++EM + +V +
Sbjct: 274 AIGVLKKMSEKGVAPDVVTYNTLIKGLSDV--LEMDEAMWLLEEMVRGKNIVKPNVVTFN 331
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+VI+ L ++ A + M+ G ++V Y +++ G++ KA EL DE+ L
Sbjct: 332 SVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL 391
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP--------------------- 309
GL PD +TY++ I G CK V+ +++ M + G +P
Sbjct: 392 GLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERA 451
Query: 310 -------------DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
DV+ Y+T++ CK +L +EL+K + +G+ + TYSI+I+
Sbjct: 452 RNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMF 511
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
A GD+ A G+L++ G ++FD I G +G + K LEL+++M K+++ +
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571
Query: 417 RVWEALLLSSVS 428
++ L S V+
Sbjct: 572 KIISTLSTSLVA 583
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 126/239 (52%), Gaps = 4/239 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ ++C R +D+ +G ++ M+ G +V Y +IR L +V A+ ++ +M
Sbjct: 119 TVLMRALCADR--LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM 176
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
GI+P++V Y+ +L G + ++F E+ G+ PDV Y I+ LCK
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M G +P+V+TYN L+ +CK + ++K+M KG+ ++ TY+ +
Sbjct: 237 KKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTL 296
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSM--FDETICGLCQRGLVRKALELLKQMAD 409
I GL+ ++ EA LLEE + + ++ F+ I GLC G +R+A ++ M +
Sbjct: 297 IKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE 355
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 109/201 (54%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT ++R+L A+G+L M+S G++ D+V Y ++ G+ + KA EL E
Sbjct: 116 VSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGE 175
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ P+V Y+ + G CK E K+ M E G +PDV+ Y L+ +LCKV +
Sbjct: 176 MCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK 235
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ ++ M +G+ N+ TY+++I+ + +G + EA G+L++ KG+ ++
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295
Query: 387 TICGLCQRGLVRKALELLKQM 407
I GL + +A+ LL++M
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEM 316
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 118/230 (51%), Gaps = 5/230 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
V Y V+ +L ++ A +L M + +P+ V YT+++ + +A L
Sbjct: 78 VSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGL 137
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+ G+ DV TY I GLC V+ ++++ M E G +P+V+ Y++LLQ CK
Sbjct: 138 LRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK 197
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ ++ EM KGI ++ Y+ +ID L G +A G+++ + +GL
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
++ I +C+ G V++A+ +LK+M++K V+P + L+ LS V ++D
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 147/316 (46%), Gaps = 25/316 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
+L S P Y+ +IK L++ + + +L+ + + +N P + F +I+
Sbjct: 276 GVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQ 335
Query: 125 TYADAHRFQDS-------------VNLF-YKI---PKFRINRVGFAIEILNCMINDGFCV 167
D R + + VNL Y + R+++V A+E+++ M + G
Sbjct: 336 GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP 395
Query: 168 DGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
D T S+++ C+ Q D + D + M+ G + Y ++ ++ ++ + A
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAED----LLSTMRDRGIEPELFHYIPLLVAMCEQGMMERA 451
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ N+M ++ D+V Y+ +++G D A+EL ++ GL PD TY++ IN
Sbjct: 452 RNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINM 510
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
K ++EA ++ M G PDV +++L+Q E+N++ EL++EM K I L+
Sbjct: 511 FAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALD 570
Query: 346 LQTYSIMIDGLASKGD 361
+ S + L + +
Sbjct: 571 SKIISTLSTSLVASNE 586
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK---GIVLNLQTYSIMIDGLAS 358
++ L S D ++YNT+L ALC+ +R L++ M + N +Y++++ L +
Sbjct: 68 LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+A GLL + G+ + I GLC V KA+EL+ +M + + P V
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187
Query: 419 WEALL 423
+ +LL
Sbjct: 188 YSSLL 192
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 26/230 (11%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ + EP Y +IK + Q +L + R E F +I L+
Sbjct: 384 LMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR-GIEPELFHYIPLLVAM 442
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL- 185
+ + + NLF ++ ++ F +D S ++ C+ DL
Sbjct: 443 CEQGMMERARNLFNEM-------------------DNNFPLDVVAYSTMIHGACKAGDLK 483
Query: 186 SSDELL-GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
++ ELL V E G V Y+ VI K + A G+L QM + G PD+ +
Sbjct: 484 TAKELLKSIVDE----GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVF 539
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
++ G + + K EL E++ + D + L N +A
Sbjct: 540 DSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKA 589
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 140/281 (49%), Gaps = 6/281 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTC---SLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
R VG A + ++ G +DG + ++ C+ +D+++ L V+ M G
Sbjct: 162 RTGLVGEAAALAEMLVR-GRGIDGLDVVGWNALIDGYCKVQDMAA--ALAVVERMTTQGV 218
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+V Y +++ AL ++ +MK+DG++P++V YT ++ + +A
Sbjct: 219 ALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFS 278
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
L++ ++ G++PDV T + ++GLC+ + M+++G P+ +TY TL+ +L
Sbjct: 279 LYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLA 338
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K R + L+ EM +G+V++L Y+ ++D L +G I EA +L A + +
Sbjct: 339 KARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFV 398
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + C+ G + A ++L QM +K V P + +++
Sbjct: 399 TYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSII 439
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 128/260 (49%), Gaps = 2/260 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + M+ G D T S ++ +C RD E +EM K+G V Y +
Sbjct: 276 AFSLYEGMVRSGVLPDVVTLSALVDGLC--RDGQFSEAYALFREMDKIGVAPNHVTYCTL 333
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I SL K + ++LG+L +M S G+ D+V YT +++ + + +A+++ +
Sbjct: 334 IDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNI 393
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TY V ++ C+ N++ +++ MEE P+V+T+++++ L K L + +
Sbjct: 394 TPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAAD 453
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+++MK GI N+ TY +IDG A + + L++G+ + + D + GL
Sbjct: 454 YMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLR 513
Query: 393 QRGLVRKALELLKQMADKDV 412
+ G + A L K M ++ +
Sbjct: 514 KNGNIEGAEALFKDMDERGL 533
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 197/470 (41%), Gaps = 51/470 (10%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
+V+ L +A ++RK + ++P + +D Q + +L + +
Sbjct: 442 LVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEAN 501
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCD---ISSVLDHIEKRENFETPEF 117
++ SL++ EA + K + E D ++++D + K N
Sbjct: 502 NFVVDSLVNGLRKNGNIEGAEA---LFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFK 558
Query: 118 IFIDLIKT--YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
+ +L++ DA + +N + KF A L M N G D T + +
Sbjct: 559 VGQELMEKNLSPDAVVYNVFINCLCTLGKFS-----EAKSFLKEMRNTGLEPDQATYNTM 613
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
+++ C R+ + + L ++EMK+ ++ YT ++ L++ V A +LN+M S
Sbjct: 614 IAARC--REGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASA 671
Query: 236 GIKP-----------------------------------DIVCYTMVLNGVIVQEDYVKA 260
G P DI Y +++ + A
Sbjct: 672 GFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNA 731
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
+ DE+L G+ PD T+N I G CK ++++ + A M G P++ T+NTLL
Sbjct: 732 TVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGG 791
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L + ++ +MK G+ N TY I++ G A K + +EA L E ++KG +
Sbjct: 792 LESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPK 851
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
+S ++ + + G++ +A EL +M + V + ++ +LL+ SKL
Sbjct: 852 ASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYD-ILLNGWSKL 900
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 158/351 (45%), Gaps = 33/351 (9%)
Query: 98 DISSVLDHIE--KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
D + L+ +E K + E + LI Y ++ +L+ + R G +
Sbjct: 237 DADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMV-----RSGVLPD 291
Query: 156 ILN-CMINDGFCVDGK----------------------TCSLILSSVCEQRDLSSDELLG 192
++ + DG C DG+ C+LI S +R E LG
Sbjct: 292 VVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARR---GSESLG 348
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ EM G +V YT ++ L K+ K+ +A +L +SD I P+ V YT++++
Sbjct: 349 LLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHC 408
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ AE++ ++ ++P+V T++ INGL K+ + + M++ G P+V+
Sbjct: 409 RAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVV 468
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY TL+ K + ++ ++M +G+ N +++GL G+I A L ++
Sbjct: 469 TYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDM 528
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+GL + + GL + G + A ++ +++ +K++SP A V+ +
Sbjct: 529 DERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFI 579
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 160/357 (44%), Gaps = 20/357 (5%)
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF------ 139
++ L + QF + ++ ++K + LI + A A R +S+ L
Sbjct: 298 LVDGLCRDGQFSEAYALFREMDKI-GVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSR 356
Query: 140 --------YKIPKFRINRVGF---AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD 188
Y R+ + G A ++L +D + T ++++ + C ++
Sbjct: 357 GVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGA 416
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + + +M++ +V ++++I LVK+ + A + +MK GI P++V Y ++
Sbjct: 417 EQV--LLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLI 474
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
+G + A +++ ++L G+ + + + +NGL K N+E + M+E G
Sbjct: 475 DGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLL 534
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
D + Y TL+ L K + ++ +E+ K + + Y++ I+ L + G EA
Sbjct: 535 LDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSF 594
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L+E N GL + ++ I C+ G KAL+LLK+M + P + L++
Sbjct: 595 LKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVG 651
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ EM G + + +I K + +A I QM G+ P+I + +L G+
Sbjct: 735 LDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLES 794
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+A+ + ++ +GL P+ TY++ + G K++N +++ M G P T
Sbjct: 795 AGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAST 854
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN+L+ K +N+ +EL EMK +G++ TY I+++G + + IE LL++
Sbjct: 855 YNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMK 914
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G + G+ +A LLK +
Sbjct: 915 ELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 8/262 (3%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+LN M + GF T +L + R D +L + M G + Y ++
Sbjct: 664 LLNEMASAGFAPTSLTHQRVLQACSGSR--RPDVILEIHELMMGAGLHADITVYNTLVHV 721
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L +A +L++M + GI PD + + ++ G A ++ ++L GL P+
Sbjct: 722 LCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPN 781
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ T+N + GL + +++ M+++G +P+ +TY+ L+ K L
Sbjct: 782 IATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYC 841
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG + TY+ ++ A G + +A L E +G+ SS +D + G +
Sbjct: 842 EMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSK-- 899
Query: 396 LVRKALE---LLKQMADKDVSP 414
+R +E LLK M + P
Sbjct: 900 -LRNGIEVRILLKDMKELGFKP 920
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 2/218 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +L+ M+ G D T + ++ C+ L D +M G + + +
Sbjct: 731 ATVVLDEMLTRGIAPDTITFNALILGHCKSSHL--DNAFAIYAQMLHQGLSPNIATFNTL 788
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L ++ +A +L+ MK G++P+ + Y +++ G + + V+A L+ E++ G
Sbjct: 789 LGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGF 848
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P TYN ++ K + ++ + M+ G TY+ LL K+R +R
Sbjct: 849 IPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRI 908
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
L+K+MK G + T S M + G EA LL+
Sbjct: 909 LLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLK 946
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 171/372 (45%), Gaps = 25/372 (6%)
Query: 78 PPPEA--YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
PPP+A Y+ VI L + + D V D E + P +I + T D H
Sbjct: 12 PPPDAFSYNVVIAGLWRSGKGSDALKVFD--EMVDMGVVPNWITYN---TMIDGHVKGGD 66
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+ GF + + M++DG + T +++LS +C R DE +
Sbjct: 67 L------------EAGFRLR--DQMLHDGPKPNIVTYNVLLSGLC--RAGRMDETRVLMD 110
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM Y+ + L + + L + + G+ +++LNG+
Sbjct: 111 EMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 170
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
KAE++ + L+ GLVP YN ING C+ ++ + M+ +PD ITYN
Sbjct: 171 KVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 230
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ LCK+ + + +LV EM+ G+ +++T++ +ID + G + + +L + K
Sbjct: 231 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 290
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
G+ + F + C+ G + +A+ +L M KDV+P A+V+ +++ + + D
Sbjct: 291 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD-TEQ 349
Query: 436 SFIRLVDQILNT 447
+F+ LV+++ N+
Sbjct: 350 AFL-LVEKMKNS 360
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + TCS++L+ +C+ ++ E + ++ + G V Y +I + +
Sbjct: 151 GVMLGAYTCSILLNGLCKDGKVAKAEQV--LEMLVHTGLVPTTVIYNTLINGYCQVRDLR 208
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A I QMKS I+PD + Y ++NG+ E KAE+L E+ G+ P V T+N I
Sbjct: 209 GAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLI 268
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ +E +++ M++ G K DVI++ ++++A CK ++ ++ +M +K +
Sbjct: 269 DAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVA 328
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N Q Y+ +ID GD +A L+E+ N G+ ++ + GLC+ + +A EL
Sbjct: 329 PNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEEL 388
Query: 404 LKQMADKDVSPGARVWEALLLSSVSKLD 431
+ + ++ + P + ++ + +K D
Sbjct: 389 IYTLRNQGLRPDVVSYNTIISACCNKGD 416
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 120/225 (53%), Gaps = 10/225 (4%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+ +M++ G ++ + +V+++ K K+ +A+ IL+ M + P+ Y +++ I
Sbjct: 284 LSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIE 343
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D +A L +++ G+ + TYN+ + GLC+ + ++ ++I + G +PDV++
Sbjct: 344 SGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 403
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNT++ A C + ++ EL++EM GI L+TY ++ LAS G + + L ++ L
Sbjct: 404 YNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQML 463
Query: 374 NKGLCTQSSMFDETICGLCQRGLVR-----KALELLKQMADKDVS 413
+K + SS++ G+ VR K L K+M++K ++
Sbjct: 464 HKNVEPSSSIY-----GIMVDAYVRCENDSKVASLKKEMSEKGIA 503
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 119/252 (47%), Gaps = 2/252 (0%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + +++ +C+ ++ E L V EM+K G + + +I + ++
Sbjct: 225 DHITYNALINGLCKLEMVTKAEDL--VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 282
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+L+ M+ GIK D++ + V+ +A + D+++ + P+ YN I+
Sbjct: 283 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 342
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+ + E ++ M+ G ++TYN LL+ LC+ +++ EL+ ++ +G+ ++
Sbjct: 343 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 402
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+Y+ +I +KGD +A LL+E G+ + + L G V L +QM
Sbjct: 403 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462
Query: 408 ADKDVSPGARVW 419
K+V P + ++
Sbjct: 463 LHKNVEPSSSIY 474
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ IL+ MI + + + I+ + E D LL V++MK G +V Y +
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL--VEKMKNSGVSASIVTYNLL 372
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
++ L + ++ +A ++ +++ G++PD+V Y +++ + D KA EL E+ G+
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 432
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P + TY+ ++ L V + M +P Y ++ A + +++
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVAS 492
Query: 333 LVKEMKWKGIVLN 345
L KEM KGI +
Sbjct: 493 LKKEMSEKGIAFD 505
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 172/401 (42%), Gaps = 55/401 (13%)
Query: 33 LDQQQAKQNVKQSLTTPPTKQQQQIP-KQPHILSSLLHSFSIYNCEPPP----EAYHFVI 87
++ AK N + TP + + K+ H+LS F+ + P E Y ++
Sbjct: 141 INSDWAKLNSMSTGLTPYRMKHIMLKIKKDHVLS--FEFFNWVKAQNPNCQTLETYSIIL 198
Query: 88 KTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY----ADAHRFQDSVNLFYKIP 143
L +N +F SVL I + + P +F ++ +Y + F + ++
Sbjct: 199 HILTKNHKFKSAESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMK 258
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILS-SVCEQRDLSSDELLGFVQEMKKLGF 202
K R AI++ M + GF ++C+ +S S+ QR D L F +EM++
Sbjct: 259 KLRN-----AIDVFCQMKDYGFLPRVESCNAYISASISLQR---GDIALTFYREMQRYR- 309
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
I P++ MV+ KA E
Sbjct: 310 ----------------------------------ISPNVYTLNMVMCAFCKWGKLEKAIE 335
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+F + +G P + +YN I G C + + +G+K+ ME+ G +PD +T+NTL+ C
Sbjct: 336 VFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFC 395
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ +L+ ++ EMK +V N TY+ +I+G + G+ L +E L G+
Sbjct: 396 RGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADIL 455
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ I GLC G +KA L+K++ +++ P + + AL+
Sbjct: 456 TYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALI 496
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 2/262 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AIE+ M GF + + +++ C + L+S L + M+K G V + +
Sbjct: 333 AIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKIL--MEKNGVRPDDVTFNTL 390
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K+ +A I ++MK++ + P+ + Y ++NG + L DE+L G+
Sbjct: 391 INGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGI 450
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D+ TYN I GLC + + ++ ++ P+ T++ L+ C + R +
Sbjct: 451 KADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQ 510
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L K M G N T+ ++I D A ++ E + + S E GL
Sbjct: 511 LYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLW 570
Query: 393 QRGLVRKALELLKQMADKDVSP 414
G AL+L K+M K + P
Sbjct: 571 LSGKEELALKLCKEMEMKHLMP 592
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 4/210 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
G ++IL M +G D T + +++ C L E EMK + Y
Sbjct: 368 GMKLKIL--MEKNGVRPDDVTFNTLINGFCRGGKL--HEANKIFSEMKANDVVPNTITYN 423
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I + + ++M +GIK DI+ Y ++ G+ ++ KA L EL
Sbjct: 424 TLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRE 483
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
LVP+ T++ I G C + N E ++ M G P+ T+ L+ CK + +
Sbjct: 484 NLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGA 543
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
E+V+EM + I + T S + GL G
Sbjct: 544 VEVVREMSERSIAPDSDTLSELCRGLWLSG 573
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N V A + N M G + + + ++ +CE + DE + ++M++ C+ V
Sbjct: 18 NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRV--DEGINIFKKMRE-DDCYPTV 74
Query: 208 -DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
YT ++ +L + + +A+ + ++M+ G +P+I YT+++N + + + + DE
Sbjct: 75 RTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDE 134
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAG------------------------------- 295
++ GLVP V TYN I+G CK+ VEA
Sbjct: 135 MVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKN 194
Query: 296 ----IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
+ +++ M E P V+TYN+L+ CK+ L+ L+ M G+V + TYS+
Sbjct: 195 VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV 254
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
ID L KG I EA L KG+ ++ I G C+ G + A LL +M +D
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314
Query: 412 VSPGARVWEALL 423
P + + AL+
Sbjct: 315 CLPNSSTYNALI 326
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 162/349 (46%), Gaps = 21/349 (6%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILN 158
E + +LI + R + +N+F K+ + F R AI + +
Sbjct: 39 EVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFS 98
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M G + T +++++++C++ L +E + EM + G + Y +I K
Sbjct: 99 EMRERGCEPNIHTYTVMINAMCKETKL--EEGRRILDEMVEKGLVPSVPTYNALIDGYCK 156
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ V A IL+ M S+ P+ Y ++ G +++ +A L ++L L P V T
Sbjct: 157 EGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVT 216
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
YN I+G CK +++ +++ M E G PD TY+ + LCK + L +K
Sbjct: 217 YNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK 276
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
KGI N Y+ +IDG G + +A LL+ L + SS ++ I GLC+ V+
Sbjct: 277 EKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQ 336
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
+AL L++ M K + + L+++ + + DF R++DQ++++
Sbjct: 337 EALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH--RILDQMVSS 383
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 175/391 (44%), Gaps = 20/391 (5%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKR---ENFETPEFIFIDLIK--TYADA 129
+C P Y ++ L E+ + + ++ + +R N T + + K +
Sbjct: 69 DCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEG 128
Query: 130 HRFQDSV---NLFYKIPKFRINRVGF--------AIEILNCMINDGFCVDGKTCSLILSS 178
R D + L +P + G+ A EIL+ M ++ + +T + ++
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICG 188
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
C ++++ + + +M + +V Y ++I K + A +LN M +G+
Sbjct: 189 FCRKKNVH--RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVV 246
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
PD Y++ ++ + + +A LF+ L G+ + Y I+G CK ++ +
Sbjct: 247 PDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSL 306
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M P+ TYN L+ LCK R++ L++ M KG+ + TY+I+I +
Sbjct: 307 LDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLK 366
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
+GD A +L++ ++ G ++ I C RG +++A +++ M ++ V P A
Sbjct: 367 EGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALT 426
Query: 419 WEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
+ L++ + L +N +F ++ ++ +T C
Sbjct: 427 Y-TLVIDAYGGLGLLNPAF-DVLKRMFDTGC 455
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ I +L KK ++ +A + N +K GIK + V YT +++G A L D +L
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+P+ TYN I+GLCK+ V+ + ++ M + G K V TY L+ A+ K + +
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ +M G ++ Y+ I ++G+I EA ++ +G+ + + I
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL+ A ++LK+M D P + L+
Sbjct: 432 DAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 29/244 (11%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K+ KV +AL ++ M G+K + YT+++ ++ + D+ A + D+++
Sbjct: 322 YNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PDVY Y +I+ C + N++ M++ M E G PD +TY ++ A + LN
Sbjct: 382 SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLN 441
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGL-----------------------ASKGDIIE- 364
+++K M G + TYS +I L A D+ +
Sbjct: 442 PAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKM 501
Query: 365 -----ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
A L E+ L G + + + I GLC+ G + A +L M ++ VSP ++
Sbjct: 502 MKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIY 561
Query: 420 EALL 423
+LL
Sbjct: 562 NSLL 565
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%)
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ D A +F+ + G + +Y I+GLC+ V+ GI + M E P V
Sbjct: 16 LNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVR 75
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY ++ AL + L EM+ +G N+ TY++MI+ + + + E +L+E
Sbjct: 76 TYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM 135
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ KGL ++ I G C+ G+V A E+L M +P R + L+
Sbjct: 136 VEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELI 186
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 150/392 (38%), Gaps = 49/392 (12%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P Y I TL + + + ++VL + K + + E I+ LI Y A + D+ +
Sbjct: 247 PDQWTYSVFIDTLCKKGRI-EEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANS 305
Query: 138 LFYK------IPKFRI-----------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
L + +P +V A+ ++ MI G T ++++ ++
Sbjct: 306 LLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAML 365
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
++ D D + +M G+ + YT I + + + +A +++ M G+ PD
Sbjct: 366 KEGDF--DYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPD 423
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN---------- 290
+ YT+V++ A ++ + G P +TY+ I L K+
Sbjct: 424 ALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVAL 483
Query: 291 -----NV--------------EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
NV E +++ M E G P++ TY L+ LCKV L +
Sbjct: 484 CDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQ 543
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+L M +G+ + Y+ +++ G +A L+ + G + CGL
Sbjct: 544 KLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGL 603
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G KA + + + W+ L+
Sbjct: 604 YEEGSKEKAKVVFSNLLQCGYNDDEVAWKILI 635
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 116/301 (38%), Gaps = 31/301 (10%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
+A IL+ M++ G+ D + + + C + ++ E + M + G + YT
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE--DMMSMMFERGVMPDALTYTL 429
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE---------------- 255
VI + + A +L +M G P Y+ ++ ++ +E
Sbjct: 430 VIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPN 489
Query: 256 -------------DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+ A ELF+++L G P++ TY I GLCK + K+ M
Sbjct: 490 VFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHM 549
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E G P YN+LL C++ LV M G + L++ +++ GL +G
Sbjct: 550 NERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSK 609
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+A + L G + I GL + GL ELL M + + + L
Sbjct: 610 EKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRML 669
Query: 423 L 423
+
Sbjct: 670 I 670
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K ++ A + + M G+ P Y +LN Y A L ++
Sbjct: 526 YAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMM 585
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G +P + + NV GL ++ + E + + + + G D + + L+ L K +
Sbjct: 586 EHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSD 645
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGL 356
EL+ M+ +G ++ QTY ++I+GL
Sbjct: 646 GCSELLGVMEARGCQIHPQTYRMLIEGL 673
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 153/352 (43%), Gaps = 23/352 (6%)
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDL 122
+ SLL+S+ + C+ P + + KT A +F + S ++ ++ F+
Sbjct: 153 LFESLLYSYRL--CDSSPHVFDLLFKTFAHLKKFRNASDTFCRMK--------DYGFLPT 202
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ 182
+ +S N Y +R A+ M + T +L++ + C+
Sbjct: 203 V----------ESCNA-YLSSLLNFSRGDIALAFYREMRRSRIYPNSYTLNLVICACCKL 251
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
L ++ +EM +GF + Y +I K + A+ + + M+ +G+ PD+V
Sbjct: 252 GRLDKANVV--FEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVV 309
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+ ++NG +A +LF E+ + L P TYN+ ING K N E G ++ M
Sbjct: 310 TFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEM 369
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
K D++TYN L+ LCK + + LV+E+ KG+V N T+S +I G +
Sbjct: 370 SRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQS 429
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
A + + + F + C+ A++LL++M ++ +P
Sbjct: 430 ERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAP 481
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 149/348 (42%), Gaps = 48/348 (13%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY----ADAHRFQDSV 136
E + ++ L + +F S+L I + + + P +F L+ +Y + H F
Sbjct: 116 ETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLF 175
Query: 137 NLFYKIPKFRINRVGFAIEILNCMIND-GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
F + KFR F C + D GF ++C+ LSS+
Sbjct: 176 KTFAHLKKFRNASDTF------CRMKDYGFLPTVESCNAYLSSL---------------- 213
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
L F G + AL +M+ I P+ +V+
Sbjct: 214 ----LNFSRGDI-----------------ALAFYREMRRSRIYPNSYTLNLVICACCKLG 252
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
KA +F+E+ +G P+V +YN I G C + + + +K+ + ME+ G PDV+T+N
Sbjct: 253 RLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFN 312
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ CKV +L +L EMK + TY+I+I+G + G+ L EE
Sbjct: 313 TLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRF 372
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I GLC+ G +KA L++++ +K + P A + AL+
Sbjct: 373 QVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 21/348 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S +P ++ ++K + + D S+ + +E+ F + LI Y
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE-SGFSPDCVTYNTLINGY 428
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A +G A ++ M +D T + IL ++C ++ L
Sbjct: 429 CKA------------------GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKL- 469
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+E + +K G+ V Y +I K V AL + ++MK I P V Y
Sbjct: 470 -EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ G+ +A +ELL GL+PD TYN ++G C++ +VE + M E
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KPDV T N LL+ LC L + +L KG ++ TY+ +I L +G + +A
Sbjct: 589 FKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
LL E K L ++ I L G +R+A E + +M +K P
Sbjct: 649 NLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLP 696
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V F+ E N I G + T ++++ C + + + F+ M K V Y
Sbjct: 189 VSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFK--DAVEFLNVMGKYNCSPDNVTY 246
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++ +L KK ++ DA +L MKS G+ P+ Y +++ G +A + + +
Sbjct: 247 NTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
L+PDV+TYN+ INGLC + +E K+ ME L PDV++YNTL+ + +++
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+L++EM KG+ N T++IM+ +G + +A + + G ++ I
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLIN 426
Query: 390 GLCQRGLVRKALELLKQMADKDV 412
G C+ G + +A + +M K++
Sbjct: 427 GYCKAGNMGEAFRTMDEMGRKNM 449
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 152/357 (42%), Gaps = 21/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
L+ YNC P Y+ ++ TL + + D +L ++ R I L+ Y
Sbjct: 230 FLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNI-LVYGY 288
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+++ N ++ M + D T +++++ +C + +
Sbjct: 289 CKMGWLKEAAN------------------VIELMTQNNLLPDVWTYNMLINGLCNEGRI- 329
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+E EM+ L +V Y +I ++ K+ +A +L +M G+KP+ V + +
Sbjct: 330 -EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++ + A ++ G PD TYN ING CK N+ + + M
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
K D +T NT+L+ LC+ ++L +L+ + +G ++ +Y +I G G++ A
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E K + + ++ I GLCQ G +A+ L ++ + + P + +L
Sbjct: 509 KLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 120/245 (48%), Gaps = 11/245 (4%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTN--------VIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
LLGF+ ++ ++ T+ I + V+ + A I +MK ++P++
Sbjct: 111 LLGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNL 170
Query: 242 VCYTMVLNGVI---VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
+ +LN ++ + E F++ + LG+VP+V T+N+ I G C +N + ++
Sbjct: 171 LTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEF 230
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M + PD +TYNT+L LCK L R+L+ +MK +G++ N TY+I++ G
Sbjct: 231 LNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCK 290
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + EA ++E L ++ I GLC G + +A +L +M + + P
Sbjct: 291 MGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVS 350
Query: 419 WEALL 423
+ L+
Sbjct: 351 YNTLI 355
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 2/257 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N+ A+E LN M D T + IL ++C++ L L + +MK G
Sbjct: 222 NKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDL--LMDMKSRGLLPNRN 279
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y ++ K + +A ++ M + + PD+ Y M++NG+ + +A +L DE+
Sbjct: 280 TYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM 339
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L L+PDV +YN ING + + + K++ M E G KP+ +T+N +++ CK ++
Sbjct: 340 ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKM 399
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ + +M+ G + TY+ +I+G G++ EA ++E K + S +
Sbjct: 400 DDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459
Query: 388 ICGLCQRGLVRKALELL 404
+ LC+ + +A +LL
Sbjct: 460 LRTLCREKKLEEAYKLL 476
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 127/266 (47%), Gaps = 2/266 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M GF D T + +++ C+ ++ E + EM + V ++R+L ++
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMG--EAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+K+ +A +L+ + G D V Y ++ G + +A +L+DE+ ++P TY
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N I GLC+ E I + + E G PD TYNT+L C+ ++ + + +M
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
++ T +I++ GL +G + +A L ++KG + ++ I LC+ G +
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646
Query: 400 ALELLKQMADKDVSPGARVWEALLLS 425
A LL +M +K++ P + A++ +
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITA 672
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 7/257 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN----VIRSLVKKEKVFDAL 226
TC+ +L+S+ S + F +E G+V N VI + K DA+
Sbjct: 172 TCNTLLNSLVR---YPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAV 228
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
LN M PD V Y +L+ + + A +L ++ GL+P+ TYN+ + G
Sbjct: 229 EFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGY 288
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
CK ++ +I M + PDV TYN L+ LC + +L EM+ ++ ++
Sbjct: 289 CKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV 348
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+Y+ +I+G I EA LLEE KG+ + + + C+ G + A + +
Sbjct: 349 VSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITK 408
Query: 407 MADKDVSPGARVWEALL 423
M + SP + L+
Sbjct: 409 MEESGFSPDCVTYNTLI 425
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 40/260 (15%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
NC+I G C GKT ++ + + E+ + G Y ++
Sbjct: 527 NCIIG-GLCQCGKT----------------EQAISKLNELLESGLLPDETTYNTILHGYC 569
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
++ V A N+M + KPD+ ++L G+ ++ KA +LF+ + G D
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTV 629
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYN I LCK+ ++ +++ MEE PD TYN ++ AL + E + +M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 338 KWKG----IVLNLQ-------------------TYSIMIDGLASKGDIIEACGLLEEALN 374
KG VL L YS I L ++G +A + E+
Sbjct: 690 LEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQ 749
Query: 375 KGLCTQSSMFDETICGLCQR 394
KG+ S + + GL +R
Sbjct: 750 KGITVDKSTYINLMDGLIKR 769
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 25/230 (10%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI LN ++ G D T + IL C + D+ ++ F +M + F + +
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDV--EKAFQFHNKMVENSFKPDVFTCNIL 599
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+R L + + AL + N S G D V Y ++ + + A L E+ L
Sbjct: 600 LRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD---------------------- 310
PD YTYN I L + + ++ M E G+ PD
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDS 719
Query: 311 -VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
+ Y+ ++ LC + + E K KGI ++ TY ++DGL +
Sbjct: 720 SSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 173/369 (46%), Gaps = 33/369 (8%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
AY VI+ + + S+L +EK + F +++ LI Y
Sbjct: 291 AYTVVIRGFCSEMKLKEAESILREMEK-QGFAPDVYVYCALISGYC-------------- 335
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE---QRDLSSDELLGFVQEMK 198
+ + A+ + + M++ G KT +ILSS+ + Q ++S E+ +E K
Sbjct: 336 ----MVGNLLKALALHDEMVSKGV----KTNCVILSSILQGLSQMGMAS-EVANQFKEFK 386
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
K+G F Y V+ +L K KV +A+ +L +MK + PDI+ YT V++G ++ V
Sbjct: 387 KMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVV 446
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
A ++ E+ +G PD+ TYNV G + + + ++ ME G KPD +T+N ++
Sbjct: 447 DALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMII 506
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
+ LC +++ + ++ K L+ YS M++G + +A LL +G
Sbjct: 507 EGLCIGGKVDDAQAFFDNLEEKC----LENYSAMVNGYCEANHVNKAFALLIRLSKQGRI 562
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTS 436
+ + F + + LC G KAL LL+ M +++P ++ ++ L +++
Sbjct: 563 LKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYV 622
Query: 437 FIRLVDQIL 445
F LVD+ L
Sbjct: 623 FNMLVDRGL 631
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 34/295 (11%)
Query: 160 MINDGFCVDGKT-------------C----SLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
MI +G C+ GK C S +++ CE + ++ + + K G
Sbjct: 504 MIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHV--NKAFALLIRLSKQGR 561
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ ++ +L + AL +L M + I P ++ Y+ V+ + + KA+
Sbjct: 562 ILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQY 621
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+F+ L+ GL PDV TY + ING C+ N ++ ++ M+ G +PDVITY LL
Sbjct: 622 VFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCS 681
Query: 323 KV------RELNRLRE---------LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
K+ L+ ++ L EMK I ++ Y+++ID +I +A
Sbjct: 682 KIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAIN 741
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
L E +++GL + + + G C G ++KA+ L +M +K + P A L
Sbjct: 742 LFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 2/251 (0%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
GF +C+ +++ + E R + D + +++K G YT I+ +K +
Sbjct: 179 GFAPQILSCNFLMNRLVESRKV--DMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLA 236
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A+ + M+ G+ P+ YT + G+ + ++ +++ + DV+ Y V I
Sbjct: 237 EAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVI 296
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
G C + ++ ++ ME+ G PDV Y L+ C V L + L EM KG+
Sbjct: 297 RGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVK 356
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N S ++ GL+ G E +E G+ + ++ + LC+ G V +A+EL
Sbjct: 357 TNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVEL 416
Query: 404 LKQMADKDVSP 414
L +M K + P
Sbjct: 417 LVEMKGKKMVP 427
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 107/219 (48%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ + + K GF ++ ++ LV+ KV A+ I Q+K+ G+ P+ YT+
Sbjct: 166 DQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIA 225
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G + + +A ++F ++ G+ P+ ++Y +I GLC + G K++ +
Sbjct: 226 IKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKI 285
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
DV Y +++ C +L +++EM+ +G ++ Y +I G G++++A
Sbjct: 286 PMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALA 345
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
L +E ++KG+ T + + GL Q G+ + K+
Sbjct: 346 LHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKE 384
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 6/264 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFCFGMVDYT 210
AI++ M G + + + + +C L LGF +Q++ + YT
Sbjct: 238 AIDVFRDMEESGVTPNSFSYTTFIEGLC----LHGRSDLGFKVLQDVINAKIPMDVFAYT 293
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
VIR + K+ +A IL +M+ G PD+ Y +++G + + +KA L DE++
Sbjct: 294 VVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSK 353
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ + + + GL + +++G D YN ++ ALCK+ ++
Sbjct: 354 GVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEA 413
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
EL+ EMK K +V ++ Y+ +I G KG +++A + E + G ++ G
Sbjct: 414 VELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGG 473
Query: 391 LCQRGLVRKALELLKQMADKDVSP 414
+ GL ++AL LL M + V P
Sbjct: 474 FSRNGLTQEALSLLNYMETQGVKP 497
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 1/203 (0%)
Query: 222 VFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
+FD A +L Q K G P I+ ++N ++ A ++ +L GL P+ YTY
Sbjct: 164 MFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYT 223
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+ I G C++ N+ I + MEE G P+ +Y T ++ LC + ++++++
Sbjct: 224 IAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINA 283
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
I +++ Y+++I G S+ + EA +L E +G ++ I G C G + KA
Sbjct: 284 KIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKA 343
Query: 401 LELLKQMADKDVSPGARVWEALL 423
L L +M K V + ++L
Sbjct: 344 LALHDEMVSKGVKTNCVILSSIL 366
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 2/274 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V AI I + G + T ++ + C + +L+ E + ++M++ G
Sbjct: 199 KVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLA--EAIDVFRDMEESGVTPNSFS 256
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT I L + +L + + I D+ YT+V+ G + +AE + E+
Sbjct: 257 YTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREME 316
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G PDVY Y I+G C N+ + + M G K + + +++LQ L ++ +
Sbjct: 317 KQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMAS 376
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ KE K GI + Y++++D L G + EA LL E K + + I
Sbjct: 377 EVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVI 436
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
G +G V AL + ++M D P + L
Sbjct: 437 SGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVL 470
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKS--DGIKPDIVCYTMVLNGVIVQEDYVKA--EELFDE 266
+++ ++KK+ D GI+N ++ DGI + + ++ +++ ++ FD
Sbjct: 113 SILMEIIKKDGNLD-FGIVNLFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDV 171
Query: 267 LLVL---GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
LL G P + + N +N L + V+ I + ++ G P+ TY ++ C+
Sbjct: 172 LLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCR 231
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
L ++ ++M+ G+ N +Y+ I+GL G +L++ +N +
Sbjct: 232 KGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFA 291
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G C +++A +L++M + +P V+ AL+
Sbjct: 292 YTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALI 331
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 6/280 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFC 203
R R A+EI M+ GF D K C ++ +C + DL+ + +G ++ K
Sbjct: 161 RAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIK---- 216
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
F Y ++I + + A I++ M+ +G +PD+V Y ++LN + +AE L
Sbjct: 217 FSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENL 276
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++ G+ PDVY+YN + GLCK N ++ M+ E DV++YNT+++ALC
Sbjct: 277 MKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCT 336
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
R +L +EM KGI ++ T++I+I +G A LL++ GL +
Sbjct: 337 ASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVL 396
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + LC+ G + A + M + ++P + AL+
Sbjct: 397 YTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALI 436
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ L EM K +DY I LV++ + A ++M G + Y+
Sbjct: 26 DQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRF 85
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G+ +++V E+L +++ LG VPD++ YN+Y+N LC +N ++ + ++ M E G
Sbjct: 86 ISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGR 145
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD++TY ++ LC+ + E+ + M KG + + ++ GL G + A
Sbjct: 146 EPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYE 205
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L A+ + S+++ I G CQ G + KA ++ M P + LL
Sbjct: 206 LTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLL 261
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 143/314 (45%), Gaps = 39/314 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +R A + + MI GF ++ T S +S +C+ ++ E L +++M +LG+
Sbjct: 56 RQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKL--LEDMDRLGYVPD 113
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y + L + ++ ALG++ M G +PDIV YT+V+NG+ + A E++
Sbjct: 114 IWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWR 173
Query: 266 ELLVLGLVPD-------------------VY----------------TYNVYINGLCKQN 290
++ G PD Y YN ING C+
Sbjct: 174 NMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAG 233
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ +I+ M G +PD++TYN LL C L L+K+M+ G+ ++ +Y+
Sbjct: 234 WIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYN 293
Query: 351 IMIDGLASKGDIIEACGLLEEALN-KGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
++ GL + +A ++ + KGLC S ++ I LC ++A +L ++M
Sbjct: 294 ELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVS-YNTIIKALCTASHTKRAYKLFEEMGG 352
Query: 410 KDVSPGARVWEALL 423
K ++P + L+
Sbjct: 353 KGITPDVVTFTILI 366
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L +C+ L ++ V +M+ G C +V Y +I++L A + +M
Sbjct: 295 LLKGLCKANRLDKAYMM-MVNKMEAKGLC-DVVSYNTIIKALCTASHTKRAYKLFEEMGG 352
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
GI PD+V +T+++ + + A++L D++ LGL+PD Y ++ LCK +
Sbjct: 353 KGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGM 412
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ M E G PDV++YN L+ LC+ ++ L ++M G + T+ ++I
Sbjct: 413 AHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIG 472
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
GL + + AC + ++ + KG T ET+
Sbjct: 473 GLIWEKKLSVACRVWDQMMEKGF-TLDGAVSETL 505
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 148 NRVGFAIEILNCMINDGFCVDG------KTCSLILSSVCEQRDLSSDELLGF-------- 193
R+ F+ I N +IN GFC G S + + CE ++ + LL +
Sbjct: 213 GRIKFSKSIYNSLIN-GFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLE 271
Query: 194 -----VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA-LGILNQMKSDGIKPDIVCYTMV 247
+++M++ G + Y +++ L K ++ A + ++N+M++ G+ D+V Y +
Sbjct: 272 EAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGL-CDVVSYNTI 330
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ + +A +LF+E+ G+ PDV T+ + I ++ + K++ M LG
Sbjct: 331 IKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGL 390
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD + Y T++ LCK ++ + +M GI ++ +Y+ +I+GL + EA
Sbjct: 391 LPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMH 450
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E+ G C F I GL + A + QM +K + V E L+
Sbjct: 451 LYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLV 506
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y I S VK + AL ++M + + Y + ++ Q + AE+ +D ++
Sbjct: 12 YRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMI 71
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G + +TY+ +I+GLCK N K++ M+ LG PD+ YN L LC +L+
Sbjct: 72 PQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLD 131
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+V+ M KG ++ TY+I+I+GL G A + + KG +
Sbjct: 132 VALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALV 191
Query: 389 CGLCQRGLVRKALEL 403
GLC G V A EL
Sbjct: 192 LGLCHDGKVDLAYEL 206
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 132/306 (43%), Gaps = 25/306 (8%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
Q I K I+S + + CEP Y+ ++ + + +++ +E R
Sbjct: 231 QAGWIDKAQSIISFMRRN----GCEPDLVTYNVLLNYCCDELLLEEAENLMKKME-RSGV 285
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
E + + +L+K A+R + + ++N M G C D +
Sbjct: 286 EPDVYSYNELLKGLCKANRLDKAYMM-----------------MVNKMEAKGLC-DVVSY 327
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ I+ ++C + +EM G +V +T +I++ +++ A +L+QM
Sbjct: 328 NTIIKALCTAS--HTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQM 385
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G+ PD V YT +++ + A +F +++ G+ PDV +YN INGLC+ + V
Sbjct: 386 TGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRV 445
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + M G PD +T+ ++ L ++L+ + +M KG L+ +
Sbjct: 446 SEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETL 505
Query: 353 IDGLAS 358
++ + S
Sbjct: 506 VNAIHS 511
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 1/252 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ M GF Y+ I L K + +L M G PDI Y + LN +
Sbjct: 66 YYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLC 125
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ A + ++ G PD+ TY + INGLC+ ++ +++ M G PD
Sbjct: 126 CENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEK 185
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
L+ LC +++ EL I + Y+ +I+G G I +A ++
Sbjct: 186 ACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFM 245
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
G ++ + C L+ +A L+K+M V P + LL + K +
Sbjct: 246 RRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNE-LLKGLCKANR 304
Query: 433 VNTSFIRLVDQI 444
++ +++ +V+++
Sbjct: 305 LDKAYMMMVNKM 316
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A + FDE+ YN +I L +Q+ + + M G + TY+ +
Sbjct: 27 QALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFI 86
Query: 319 QALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
LCKV+ + +L+++M G V ++ Y+I ++ L + + A G+++ + KG
Sbjct: 87 SGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGRE 146
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ I GLC+ G A+E+ + M K SP + AL+L
Sbjct: 147 PDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLG 193
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 181/391 (46%), Gaps = 36/391 (9%)
Query: 64 LSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI----- 118
+++LL + +P + +I L +F + L+ EK E+ F+
Sbjct: 324 MNTLLAEMKEMDIQPNVVTFGILINHLC---KFRRVDEALEVFEKMNGGESNGFLVEPDV 380
Query: 119 --FIDLIKTYADAHRFQDSVNLFYKI---PKFRINRVGFAIEILNCMINDGFCVDGKTCS 173
+ LI R ++ + L ++ P+ N V + NC+I DG+C S
Sbjct: 381 ITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTY-----NCLI-DGYC----KAS 430
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+I ++ R+L +M K G +V ++ + K ++ A+ N+M+
Sbjct: 431 MIEAA----REL--------FDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G+K + V YT ++ + KA ELFDE+L G PD Y I+GL + ++
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD 538
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++ M+E G PD++++N L+ C+ +L+ E++KEM+ GI + TY+ +I
Sbjct: 539 RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ GD A L+++ + +GL + I C G + +A+++ + M+
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658
Query: 414 PGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
P V +L++S+ + + V+ + + L+D +
Sbjct: 659 PPNTVIYNILINSLCRKNQVDLA-LSLMDDM 688
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 135/298 (45%), Gaps = 38/298 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A E+ + M DG + T + ++ +C+ ++ + F EM+ G V YT +
Sbjct: 435 ARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRING--AVEFFNEMQGKGLKGNAVTYTAL 492
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
IR+ + A+ + ++M G PD + Y +++G+ +A + ++ G
Sbjct: 493 IRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGF 552
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ ++NV ING C++N ++ +M+ ME G KPD +TYNTL+ K + +
Sbjct: 553 SPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHR 612
Query: 333 LVKEMKWKGIVLNLQTY------------------------------------SIMIDGL 356
L+K+M +G+V + TY +I+I+ L
Sbjct: 613 LMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSL 672
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
K + A L+++ KG+ ++ F+ GL ++ + KA EL+ +M + +P
Sbjct: 673 CRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNP 730
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 113/225 (50%), Gaps = 3/225 (1%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+N + A+E+ + M+ G D ++S + + L D + +MK+ GF +
Sbjct: 499 VNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKL--DRASFVLSKMKEAGFSPDI 556
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V + +I +K K+ +A +L +M++ GIKPD V Y +++ D+ A L +
Sbjct: 557 VSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKK 616
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVITYNTLLQALCKVR 325
++ GLVP V TY I+ C N++ +K+ M P+ + YN L+ +LC+
Sbjct: 617 MVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKN 676
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+++ L+ +MK KG+ N T++ M GL K + +A L++
Sbjct: 677 QVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMD 721
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 26/323 (8%)
Query: 145 FRINRVGFAIEILNCMINDG--FCVDGKTCSLILSSVCEQ----RDLSSDELLGFVQEMK 198
FR RV A+ +L+ M+ F + T ++ S++ ++ R + +E++G V +
Sbjct: 203 FRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFA 262
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ-MKSDGIKPDIVCYTMVLNGVIVQEDY 257
+ + T +I L + + A +L+ MK G+ C + L + ++
Sbjct: 263 EHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNAL-LTALGRAREF 321
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-----KPDVI 312
+ L E+ + + P+V T+ + IN LCK V+ +++ M S +PDVI
Sbjct: 322 KRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVI 381
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVL-NLQTYSIMIDGLASKGDIIEACGLLEE 371
TYNTL+ LCKV LV+ M+ + + N TY+ +IDG K +IEA L +
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYC-KASMIEAARELFD 440
Query: 372 ALNK-GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
+NK G+ + + G+C+ G + A+E +M K + A + AL+ +
Sbjct: 441 QMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRA----- 495
Query: 431 DFVNTSFI----RLVDQILNTPC 449
F N + I L D++L C
Sbjct: 496 -FCNVNNIEKAMELFDEMLEAGC 517
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 22/261 (8%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C P Y+ +I L++ + S VL + +E +P+ + +++
Sbjct: 517 CSPDAIVYYTLISGLSQAGKLDRASFVLSKM--KEAGFSPDIVSFNVL------------ 562
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+N F R N++ A E+L M N G DG T + ++S + D S+ L ++
Sbjct: 563 INGFC-----RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRL--MK 615
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG-IKPDIVCYTMVLNGVIVQ 254
+M K G +V Y +I + + +A+ I M S + P+ V Y +++N + +
Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRK 675
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
A L D++ V G+ P+ T+N GL ++N + +++ M E PD IT
Sbjct: 676 NQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITM 735
Query: 315 NTLLQALCKVRELNRLRELVK 335
L + L V E +L+ V+
Sbjct: 736 EILTEWLSAVGETAKLKSFVQ 756
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL---FDELL 268
+I L +K +V DAL +L++M ++P G IV K +++ DE
Sbjct: 198 LIDVLFRKGRVDDALHLLDEM----LQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEE 253
Query: 269 VLGLVPDVYTYNVYING---------LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
++GLV + V+ N LC+ + ++ + +LG + + N LL
Sbjct: 254 IVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLT 313
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE---ALNKG 376
AL + RE R+ L+ EMK I N+ T+ I+I+ L + EA + E+ + G
Sbjct: 314 ALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNG 373
Query: 377 LCTQSSM--FDETICGLCQRGLVRKALELLKQM 407
+ + ++ I GLC+ G + L L+++M
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLGLVERM 406
>gi|297853270|ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340358|gb|EFH70775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 133/270 (49%), Gaps = 6/270 (2%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+++ MI DG+ T +L++ + C + L+ D + F++ K + Y ++ S
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICT-CGEAGLARDVVEQFIKS-KTFNYRPYKHSYNAILHS 231
Query: 216 L--VKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
L VK+ K+ D + QM DG PD++ Y +V+ + L DE++ G
Sbjct: 232 LLGVKQYKLIDW--VYEQMLEDGFSPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFS 289
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
PD+YTYN+ ++ L N A + ++ M E+G +P VI + TL+ L + +L +
Sbjct: 290 PDLYTYNILLHHLATGNKPLAALNLLTHMREVGVEPGVIHFTTLVDGLSRAGKLEACKYF 349
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
+ EM G ++ Y++MI G S G++ +A + +E KG ++ I G C
Sbjct: 350 MDEMVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCM 409
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
G ++A LLK+M + +P V+ L+
Sbjct: 410 AGKFKEACSLLKEMESRGCNPNFVVYSTLV 439
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 142/319 (44%), Gaps = 20/319 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
N YH ++K AE ++ + ++D + K + + T F LI T +A +D
Sbjct: 147 NFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLLICTCGEAGLARD 205
Query: 135 SVNLFYKIPKFR-----------------INRVGFAIEILNCMINDGFCVDGKTCSLILS 177
V F K F + + + M+ DGF D T ++++
Sbjct: 206 VVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFSPDVLTYNIVMF 265
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+ R +D L + EM K GF + Y ++ L K AL +L M+ G+
Sbjct: 266 A--NFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLTHMREVGV 323
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P ++ +T +++G+ + DE++ +G PDV Y V I G +E +
Sbjct: 324 EPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVCYTVMITGYISGGELEKAEE 383
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
M M E G P+V TYN++++ C + L+KEM+ +G N YS +++ L
Sbjct: 384 MFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNLR 443
Query: 358 SKGDIIEACGLLEEALNKG 376
+ G ++EA ++++ + KG
Sbjct: 444 NAGKVLEAHEIVKDMVEKG 462
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 107/206 (51%), Gaps = 4/206 (1%)
Query: 142 IPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE-QRDLSSDELLGFVQEMKKL 200
FR+ + +L+ M+ DGF D T +++L + + L++ L + M+++
Sbjct: 265 FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAA---LNLLTHMREV 321
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G G++ +T ++ L + K+ +++M G PD+VCYT+++ G I + KA
Sbjct: 322 GVEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
EE+F E+ G +P+V+TYN I G C + ++ ME G P+ + Y+TL+
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNN 441
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNL 346
L ++ E+VK+M KG ++L
Sbjct: 442 LRNAGKVLEAHEIVKDMVEKGHYVHL 467
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%)
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
M E G PDV+TYN ++ A ++ + +RL L+ EM G +L TY+I++ LA+
Sbjct: 248 MLEDGFSPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
+ A LL G+ F + GL + G + + +M +P +
Sbjct: 308 PLAALNLLTHMREVGVEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVCYTV 367
Query: 422 LLLSSVS 428
++ +S
Sbjct: 368 MITGYIS 374
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 149/338 (44%), Gaps = 42/338 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG-FVQEMKKLGFCF 204
R +R A+ ++ G VD S +L CE + +DE L + +LG
Sbjct: 89 RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAK--RTDEALDILLHRTPELGCVP 146
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI--KPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y +++SL + K A +L M G PD+V Y V++G + D KA +
Sbjct: 147 DVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 206
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQ-------------------------NNVEAG-- 295
LF E++ G+ PD+ TYN ++ LCK NN+ G
Sbjct: 207 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 266
Query: 296 --------IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+++ M PDV+T + L+ +LCK ++ R++ M KG ++
Sbjct: 267 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 326
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+Y+IM++G A+KG +++ L + L G+ F+ I G++ KA+ + +M
Sbjct: 327 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEM 386
Query: 408 ADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
D V P + ++ L + K+D F +++DQ
Sbjct: 387 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ 424
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 94/180 (52%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +EM++ +V + ++ SL K K+ +A + + M G PD+ Y ++L
Sbjct: 273 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 332
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG + V +LFD +L G+ PD YT+NV I ++ + + M + G K
Sbjct: 333 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVK 392
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PDV+TY T++ ALC++ +++ E +M +G+ + Y+ +I G + G +++ G+
Sbjct: 393 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQGI 452
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 8/254 (3%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM + G +V Y +V+ +L K + A L QM + + P+ Y ++ G
Sbjct: 209 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 268
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +F E+ ++PDV T ++ + LCK ++ + M G PDV +Y
Sbjct: 269 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 328
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N +L L + +L M GI + T+++ I A+ G + +A + E +
Sbjct: 329 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRD 388
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL--------LLSS 426
G+ + I LC+ G + A+E QM D+ V+P + L +L
Sbjct: 389 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLK 448
Query: 427 VSKLDFVNTSFIRL 440
+DF N + L
Sbjct: 449 TQGIDFGNNEIMAL 462
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 141/294 (47%), Gaps = 24/294 (8%)
Query: 131 RFQDSVNLFYKIPKFRINRVGFAIEILN-CMINDGFCVDGK-TCSLILSSVCEQRDLSSD 188
R ++++ LF FR+ ++G + L C + D FC K T L L + ++ +S+D
Sbjct: 546 RLEEALFLF-----FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
+ C VI L K ++ DA N + ++PDIV Y ++
Sbjct: 601 -----------IAVC------NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G +AE +F+ L V P+ T + I+ LCK N+++ I+M + M E GSK
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P+ +TY L+ K ++ +L +EM+ KGI ++ +YSI+IDGL +G + EA +
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+A++ L + I G C+ G + +A L + M V P + AL
Sbjct: 764 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 159 CMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
C + +GFC G+ + L V EQR + D ++ Y+ +I
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPD-----------------LIAYSTLIDGYF 332
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K + + +Q G+K D+V ++ ++ + D A ++ +L G+ P+V
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TY + I GLC+ + M + + G +P ++TY++L+ CK L L ++M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
G ++ Y +++DGL+ +G ++ A + L + + +F+ I G C+
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSV 427
+AL++ + M + P + ++ S+
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 123/269 (45%), Gaps = 2/269 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ +G ++ + ++ G +D S + + DL++ ++ + M G
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV--YKRMLCQGISP 389
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V YT +I+ L + ++++A G+ Q+ G++P IV Y+ +++G + L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++++ +G PDV Y V ++GL KQ + ++ M + +V+ +N+L+ C++
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ ++ + M GI ++ T++ ++ +G + EA L GL + +
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVS 413
I C+ L+L M +S
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKIS 598
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 106/238 (44%), Gaps = 5/238 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S ++ C+ +L S ++M K+G+ +V Y ++ L K+ + A+
Sbjct: 428 TYSSLIDGFCKCGNLRSG--FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M I+ ++V + +++G + +A ++F + + G+ PDV T+ + +
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+E + + M ++G +PD + Y TL+ A CK + +L M+ I ++ +
Sbjct: 546 RLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 605
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ-RGL--VRKALELLK 405
++I L I +A + + ++ ICG C R L + ELLK
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 177/396 (44%), Gaps = 33/396 (8%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y ++ LA++ +F I +VL H E + E IF++L+K ++ + V +F
Sbjct: 165 TYATILHKLAKSKKFQAIDAVL-HQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDA 223
Query: 142 I-------PKFR---------INRVGFAIEILNCMINDGFCVDGK------------TCS 173
I P + + +I N I+ F V + T S
Sbjct: 224 IXPIVREKPSLKAISTCLNLLVESNQSSITAKNGDIDSAFEVVEEMKKSHVSYPNLITYS 283
Query: 174 LILSSVCEQRDLSSDELLGFVQEM-KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+++ +C L E + +EM K + Y +I KV AL I+ M
Sbjct: 284 TLINGLCGSGRLK--EAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFM 341
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K +G P++ Y+ ++NG + +A+E+FDE+ LGL PD Y IN C+ V
Sbjct: 342 KKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRV 401
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++++ M E + D +T+N +L LC+ +++ + ++G+ LN +Y I+
Sbjct: 402 DEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRIV 461
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
++ L +G++ +A L+ L +G+ + +E + LC+ G V A+ L + +
Sbjct: 462 LNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGF 521
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTP 448
P W ALL+ + + + +F L D ++ P
Sbjct: 522 KPEPNSW-ALLVELICRERKLLPAFELLDDLVIQEP 556
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 129/306 (42%), Gaps = 58/306 (18%)
Query: 98 DISSVLDHIE--KRENFETPEFI-FIDLIKTYADAHRFQDSVNLFYK-IPKFRI------ 147
DI S + +E K+ + P I + LI + R ++++ LF + + K +I
Sbjct: 258 DIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALT 317
Query: 148 -----------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+V A++I+ M +G + S +++ C++ L +E E
Sbjct: 318 YNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRL--EEAKEVFDE 375
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
MK LG V YT +I + +V +A+ +L M + + D V + ++L G+ +
Sbjct: 376 MKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGR 435
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME------------- 303
+ +A + + L G+ + +Y + +N LC++ ++ +++ M
Sbjct: 436 FEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNE 495
Query: 304 ----------------------ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
ELG KP+ ++ L++ +C+ R+L EL+ ++ +
Sbjct: 496 LLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLVIQE 555
Query: 342 IVLNLQ 347
+L+ Q
Sbjct: 556 PILSNQ 561
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 14/247 (5%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E+ V E + GF Y ++ L K +K +L+QM + K + ++
Sbjct: 148 EIFNRVAEQR--GFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLM 205
Query: 249 NGVIVQEDYVKAEELFDELL-VLGLVPDVYTYNVYINGLCKQN---------NVEAGIKM 298
+ + E+FD + ++ P + + +N L + N ++++ ++
Sbjct: 206 KHFSKLSLHERVVEMFDAIXPIVREKPSLKAISTCLNLLVESNQSSITAKNGDIDSAFEV 265
Query: 299 IACMEELG-SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL-NLQTYSIMIDGL 356
+ M++ S P++ITY+TL+ LC L EL +EM K +L + TY+ +I+G
Sbjct: 266 VEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGF 325
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ A ++E G + + G C+ G + +A E+ +M + P
Sbjct: 326 CHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDT 385
Query: 417 RVWEALL 423
+ L+
Sbjct: 386 VGYTTLI 392
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 162/380 (42%), Gaps = 53/380 (13%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
PEA+ V+ + + Q D VL + +R E I I + A+R + ++
Sbjct: 245 PEAFLRVMVSYSRAGQLRDALKVLT-LMQRAGVEPNLLICNTTIDVFVRANRLEKALRFL 303
Query: 140 YKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVC-- 180
++ I +RV AIE+L+ M + G D + I+ +C
Sbjct: 304 ERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKE 363
Query: 181 ----EQRDL----------------------------SSDELLGFVQEMKKLGFCFGMVD 208
E RDL +DE L F+++ ++ GF V
Sbjct: 364 KRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVG 423
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDG-IKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ ++ +L K+ ++ +A ++N+M S G PD+V YT V+NG + KA++L +
Sbjct: 424 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIM 483
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G P+ +Y +NGLC+ +M+ EE P+ ITY+ L+ L K +L
Sbjct: 484 HTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKL 543
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++V+EM KG ++++ L G EA +EE LNKG F
Sbjct: 544 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 603
Query: 388 ICGLCQRGLVRKALELLKQM 407
I G CQ + AL +L M
Sbjct: 604 IHGFCQNDELDAALSVLDDM 623
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 127/252 (50%), Gaps = 3/252 (1%)
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
MK+ G + V+ S + ++ DAL +L M+ G++P+++ ++ +
Sbjct: 236 MKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 295
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
KA + + V+G+VP+V TYN I G C + VE I+++ M G PD ++Y T
Sbjct: 296 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYT 355
Query: 317 LLQALCKVRELNRLRELVKEM-KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
++ LCK + + +R+L+K+M K G+V + TY+ +I L EA L++A K
Sbjct: 356 IMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEK 415
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
G + + LC+ G + +A +L+ +M K P V +++ +L V+
Sbjct: 416 GFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 475
Query: 436 SFIRLVDQILNT 447
+ + + QI++T
Sbjct: 476 A--KKLLQIMHT 485
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 159/361 (44%), Gaps = 24/361 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL C P +Y+ ++ L + + ++ ++ + K + + LI
Sbjct: 337 LLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHML 396
Query: 127 ADAHRFQDSVNLFYKIPK---FRINRVGF---------------AIEILNCMINDGFCV- 167
H D F K + FRI++VG+ A +++N M++ G C
Sbjct: 397 T-KHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 455
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + +++ C ++ D+ +Q M G+ V YT ++ L + K +A
Sbjct: 456 DVVTYTAVVNGFCRLGEV--DKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEARE 513
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++N + P+ + Y+++++G+ + +A ++ E+++ G P N+ + LC
Sbjct: 514 MMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 573
Query: 288 KQNNVEAGIK-MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
+ K M C+ + G +V+ + T++ C+ EL+ ++ +M ++
Sbjct: 574 RDGRTHEARKFMEECLNK-GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADV 632
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ ++D L KG I EA L+++ L+KG+ + I CQ V + +L++
Sbjct: 633 FTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEK 692
Query: 407 M 407
M
Sbjct: 693 M 693
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 178/409 (43%), Gaps = 60/409 (14%)
Query: 80 PEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
P Y+ +++ L++ VL +++R + TPE F+ ++ +Y+ A + +D
Sbjct: 210 PMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPE-AFLRVMVSYSRAGQLRD----- 263
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
A+++L M G + C+ + L ++ L F++ M+
Sbjct: 264 -------------ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRL--EKALRFLERMQV 308
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
+G +V Y +IR +V +A+ +L+ M S G PD V Y ++ + ++ V+
Sbjct: 309 VGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVE 368
Query: 260 AEELFDELLV-LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK---------- 308
+L ++ GLV D TYN I+ L K ++ + + + EE G +
Sbjct: 369 VRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIV 428
Query: 309 --------------------------PDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
PDV+TY ++ C++ E+++ ++L++ M G
Sbjct: 429 HALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGY 488
Query: 343 VLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALE 402
N +Y+ +++GL G +EA ++ + + S + + GL + G + +A +
Sbjct: 489 KPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACD 548
Query: 403 LLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPCKM 451
++++M K PG V LLL S+ + D + +++ LN C +
Sbjct: 549 VVREMVLKGFFPGP-VEINLLLQSLCR-DGRTHEARKFMEECLNKGCAI 595
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 81/205 (39%), Gaps = 35/205 (17%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A +++ M+ GF +L+L S+C RD + E F++E G +V++T V
Sbjct: 546 ACDVVREMVLKGFFPGPVEINLLLQSLC--RDGRTHEARKFMEECLNKGCAINVVNFTTV 603
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + +++ AL +L+ M D+ YT +++ + + +A EL ++L G+
Sbjct: 604 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGI 663
Query: 273 VPDVYTY---------------------------------NVYINGLCKQNNVEAGIKMI 299
P TY N I LC +E K++
Sbjct: 664 DPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADKLL 723
Query: 300 ACMEELGSKPDVITYNTLLQALCKV 324
+ S+ D T L++ K+
Sbjct: 724 GKVLRTASRSDAKTCYALMEGYLKI 748
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 145/306 (47%), Gaps = 4/306 (1%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
F ++ I + L Y + K N++ A ++ I G D + + ++
Sbjct: 82 FFHLEFIVRKGHKPDVAQATQLLYDLCK--SNKMKKATRVMEMTIESGIIPDAASYTFLV 139
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+++C++ ++ + V++M++ G V Y +++R L K + +L +L+++ G
Sbjct: 140 NNLCKRGNIGY--AMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKG 197
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P+ ++ +L + +A +L D ++ G P++ +YNV + GLCK+ E I
Sbjct: 198 LVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAI 257
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ + G P+V++ N +L++LC ELV EM + +L TY+I+I L
Sbjct: 258 QFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSL 317
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
AS G I A +L+E + ++ F+ I LC+ G ++ L QM +P
Sbjct: 318 ASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPND 377
Query: 417 RVWEAL 422
+ A+
Sbjct: 378 GTFNAI 383
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 101/194 (52%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
++ DA L + G KPD+ T +L + KA + + + G++PD +Y
Sbjct: 77 RLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYT 136
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK 340
+N LCK+ N+ ++++ MEE G + +TYN+L++ LCK LN+ +L+ ++ K
Sbjct: 137 FLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRK 196
Query: 341 GIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G+V N T+S +++ + + EA LL+ + KG ++ + GLC+ G +A
Sbjct: 197 GLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 256
Query: 401 LELLKQMADKDVSP 414
++ + + K +P
Sbjct: 257 IQFFRDLPSKGFNP 270
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 143/307 (46%), Gaps = 13/307 (4%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLGFCF 204
R+N F +E + + G D + +L +C+ + V EM + G
Sbjct: 77 RLNDAFFHLEFI---VRKGHKPDVAQATQLLYDLCKSNKMKKATR---VMEMTIESGIIP 130
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
YT ++ +L K+ + A+ ++ +M+ +G + V Y ++ G+ + ++ +L
Sbjct: 131 DAASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLL 190
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
D+L+ GLVP+ +T++ + K+ V+ +K++ + G KP++++YN LL LCK
Sbjct: 191 DKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKE 250
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ +++ KG N+ + +I++ L +G EA L+ E ++ +
Sbjct: 251 GRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTY 310
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
+ I L G ++ A ++L +M P A + ++ L K D V ++ +D
Sbjct: 311 NILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLV----VKCLD 366
Query: 443 QILNTPC 449
Q+++ C
Sbjct: 367 QMIHHCC 373
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 129/273 (47%), Gaps = 3/273 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++L+ +I G + + +++L+ +C ++ ++E + F +++ GF +V +
Sbjct: 221 AMKLLDGIIAKGGKPNLVSYNVLLTGLC--KEGRTEEAIQFFRDLPSKGFNPNVVSCNII 278
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+RSL + + +A ++ +M S+ P +V Y +++ + A ++ DE++
Sbjct: 279 LRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASF 338
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P T+N I+ LCK+ + +K + M P+ T+N + LC+ + R
Sbjct: 339 QPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAI-AVLCEGGRVQRAFS 397
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+++ + K Y +I L KG+ A LL E + G + I GLC
Sbjct: 398 IIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLC 457
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
G++ +ALE+ + + + D P + AL+L
Sbjct: 458 VEGMLDEALEIFRLLEENDYRPILGNFNALILG 490
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 115/247 (46%)
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI 241
RD+ ++ ++ + + G + T ++ L K K+ A ++ GI PD
Sbjct: 73 NRDIRLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDA 132
Query: 242 VCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIAC 301
YT ++N + + + A +L +++ G + TYN + GLCK N+ ++++
Sbjct: 133 ASYTFLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDK 192
Query: 302 MEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGD 361
+ G P+ T++ LL+A K R ++ +L+ + KG NL +Y++++ GL +G
Sbjct: 193 LMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGR 252
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEA 421
EA + +KG + + LC G +A EL+ +M ++ SP +
Sbjct: 253 TEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNI 312
Query: 422 LLLSSVS 428
L+ S S
Sbjct: 313 LIGSLAS 319
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 5/224 (2%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A ++L+ M+ F T + I+S +C ++ +D ++ + +M + C D
Sbjct: 322 RIQHAFQVLDEMMRASFQPSAATFNPIISHLC--KEGKADLVVKCLDQM--IHHCCNPND 377
Query: 209 YT-NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
T N I L + +V A I+ + + Y V++ + + + A +L E+
Sbjct: 378 GTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEM 437
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G VPD YTY+ I GLC + ++ +++ +EE +P + +N L+ CK
Sbjct: 438 IQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGRT 497
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+ E+ + M KG N TY+I+++G+A + + A +L+E
Sbjct: 498 DLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKE 541
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 176 LSSVCE----QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
++ +CE QR S + LG Q F Y VI SL +K + A +L +
Sbjct: 383 IAVLCEGGRVQRAFSIIQSLGNKQNSSTHDF------YRGVISSLCRKGNTYPAFQLLYE 436
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M G PD Y+ ++ G+ V+ +A E+F L P + +N I G CK
Sbjct: 437 MIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGR 496
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
+ +++ M G P+ TY L++ + E E++KE+
Sbjct: 497 TDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKEL 542
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 120/299 (40%), Gaps = 38/299 (12%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQEMKKLGFCFGMV 207
R AI+ + + GF + +C++IL S+C E R ++EL V EM +V
Sbjct: 252 RTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANEL---VAEMDSEERSPSLV 308
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL------------------- 248
Y +I SL ++ A +L++M +P + ++
Sbjct: 309 TYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQM 368
Query: 249 ------------NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY---INGLCKQNNVE 293
N + V + + + F + LG + T++ Y I+ LC++ N
Sbjct: 369 IHHCCNPNDGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTY 428
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+++ M + G PD TY++L++ LC L+ E+ + ++ L ++ +I
Sbjct: 429 PAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALI 488
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
G G + + E + KG + + + G+ A E+LK++ + V
Sbjct: 489 LGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELYIRQV 547
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 134/303 (44%), Gaps = 23/303 (7%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ----EMKKLGFCFGMV 207
+A ++L M+ G ++++ S+C +D S LL + EM G +
Sbjct: 390 YAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKI 449
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ ++ R L K A ++ +M G PD Y+ VL + A LF+E+
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEM 509
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GLV DVYTY + ++ CK +E K M E+G P+V+TY L+ A K +++
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM---- 383
+ EL + M +G + N+ TYS +IDG G + +AC + E M
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 384 -------------FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVS 428
+ + G C+ V +A +LL M+ + P V++AL+ L V
Sbjct: 630 YDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 689
Query: 429 KLD 431
KLD
Sbjct: 690 KLD 692
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 5/248 (2%)
Query: 163 DGFCVDG---KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
DG C G K C I +C +D+ ++ F Q +V Y ++ K
Sbjct: 596 DGHCKAGQMEKACQ-IFERMCGSKDVPDVDMY-FKQYDDDNSERPNVVIYGALLDGFCKL 653
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A +L+ M +G +P+ + Y +++G+ +A+E+ E+ G +YTY
Sbjct: 654 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTY 713
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+ K + K+++ M E P+V+ Y ++ LCKV + + +L++ M+
Sbjct: 714 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 773
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG N+ TY+ MIDG G I LLE +KG+ + I C+ G +
Sbjct: 774 KGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 833
Query: 400 ALELLKQM 407
A LL++M
Sbjct: 834 AHNLLEEM 841
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K+ +A + +M G + Y+ +++ + A ++ ++L
Sbjct: 678 YDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 737
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
P+V Y I+GLCK + K++ MEE G +P+V+TY ++ ++ ++
Sbjct: 738 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIE 797
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL++ M KG+ N TY ++ID G + A LLEE T ++ + + I
Sbjct: 798 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVI 857
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + + ++L LL ++ D +P ++ L+
Sbjct: 858 EGFNKEFI--ESLGLLDEIGQDDTAPFLSLYRLLV 890
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%)
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P++V Y +L+G +A +L D + + G P+ Y+ I+GLCK ++ +
Sbjct: 637 RPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 696
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ A M E G + TY++L+ KV+ + +++ +M N+ Y+ MIDGL
Sbjct: 697 VKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 756
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G EA L++ KG + I G + G + LELL++M K V+P
Sbjct: 757 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYV 816
Query: 418 VWEALL 423
+ L+
Sbjct: 817 TYRVLI 822
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 141/340 (41%), Gaps = 60/340 (17%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+++RV A ++L+ M +G + ++ +C+ L DE EM + GF
Sbjct: 652 KLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL--DEAQEVKAEMSEHGFPAT 709
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y+++I K ++ A +L++M + P++V YT +++G+ +A +L
Sbjct: 710 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 769
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G P+V TY I+G + +E ++++ M G P+ +TY L+ CK
Sbjct: 770 MMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 829
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE-------------- 371
L+ L++EMK + Y +I+G + IE+ GLL+E
Sbjct: 830 ALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYR 887
Query: 372 -----------------------ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
+ L SS ++ I LC V KA L +M+
Sbjct: 888 LLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMS 947
Query: 409 DKDVSP--------------GARVWEALLLSSVSKLDFVN 434
K V P +++ EALLL LDF++
Sbjct: 948 KKGVIPEMQTFCSLIKGLFRNSKISEALLL-----LDFIS 982
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 138/334 (41%), Gaps = 15/334 (4%)
Query: 117 FIFIDLIKTYADAHRFQDSVNL-----FYKIPKFRINRVGFAIEILNCMINDGFCVDGKT 171
F+ D + + + HR NL + + + +VG E L M + F D
Sbjct: 245 FLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVPDTVF 304
Query: 172 CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQ 231
+ ++S +CE +E + F+ M+ +V Y+ ++ + K+++ +LN
Sbjct: 305 YTKLISGLCEASLF--EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M +G P + +++ D+ A +L +++ G P YN+ I +C +
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKD 422
Query: 292 ------VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+E K + M G + I ++ + LC + + +++EM +G + +
Sbjct: 423 SLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
TYS ++ L + + A L EE GL + + C+ GL+ +A +
Sbjct: 483 TSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 406 QMADKDVSPGARVWEALLLS--SVSKLDFVNTSF 437
+M + +P + AL+ + K+ + N F
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 6/241 (2%)
Query: 204 FGMVDYTNV-IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
FG ++ NV +R + AL L ++K +P Y ++ + + A
Sbjct: 199 FG--EFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASL 256
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ E+ + L D +T Y LCK + + ME PD + Y L+ LC
Sbjct: 257 VHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLC 313
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ + + M+ + N+ TYS ++ G +K + +L + +G
Sbjct: 314 EASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 373
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVD 442
+F+ + C G A +LLK+M +PG V+ L+ S D ++ + L +
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAE 433
Query: 443 Q 443
+
Sbjct: 434 K 434
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 135/343 (39%), Gaps = 31/343 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + S+ CEP Y +I L + + + V + + F + + LI Y
Sbjct: 662 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEH-GFPATLYTYSSLIDRY 720
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R QD + + K N + I MI DG C GKT
Sbjct: 721 FKVKR-QDLASKV--LSKMLENSCAPNVVIYTEMI-DGLCKVGKT--------------- 761
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE +Q M++ G +V YT +I + K+ L +L +M S G+ P+ V Y +
Sbjct: 762 -DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRV 820
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ A L +E+ Y I G K+ I+ + ++E+G
Sbjct: 821 LIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEF-----IESLGLLDEIG 875
Query: 307 ---SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL--NLQTYSIMIDGLASKGD 361
+ P + Y L+ L K + L L++E+ L TY+ +I+ L
Sbjct: 876 QDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 935
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ +A L E KG+ + F I GL + + +AL LL
Sbjct: 936 VDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 159/340 (46%), Gaps = 25/340 (7%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVN-LFYKIPKFRINRVGFAIEILNCMINDGFCV 167
R I L+K + +A R ++++ L ++ P+ L C + D F
Sbjct: 141 RTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPE------------LGC-VPDVF-- 185
Query: 168 DGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDA 225
+ +++L S+C Q + +D+LL + E + C +V Y VI K+ V A
Sbjct: 186 ---SYNILLKSLCNQGKSGQADDLLRMMAEGGTV--CSPDVVAYNTVIDGFFKEGDVNKA 240
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ +M GI PD+V Y+ V++ + KAE +++ G++PD +TYN I G
Sbjct: 241 CDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYG 300
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+ +++ M PDV+ NTL+ +LCK ++ R++ M KG +
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ +Y+IM++G A+KG +++ L + L G+ F+ I G++ KA+ +
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 420
Query: 406 QMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+M D V P + ++ L + K+D F +++DQ
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ 460
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 115/235 (48%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +EM++ +V ++ SL K K+ +A + + M G PD+ YT++L
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
NG + V +LFD +L G+ P + T+NV I ++ + + M + G K
Sbjct: 369 NGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 428
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
P V+TY T++ ALC++ +++ E +M +G+V + Y +I G + G +++A L
Sbjct: 429 PHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL 488
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E +N G+ F I LC+ G V A + + + P A V+ L+
Sbjct: 489 ISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
RI ++ A+E N MI+ G D ++ C L + L + E+ G
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKEL--ISEIMNNGMRLD 500
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++I +L K +V DA I + + G+ PD V Y M+++G + KA +FD
Sbjct: 501 IVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFD 560
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G+ P+V Y +NG CK ++ G+ + M + G KP I YN ++ L +
Sbjct: 561 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ EM GI +N TYSI++ GL EA L +E + +
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G+ Q V +A +L ++ + P A + ++
Sbjct: 681 TMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMI 718
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ + EM+ G +V Y VI +L + K+ DA+ NQM G+ PD Y +
Sbjct: 413 DKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL 472
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G +KA+EL E++ G+ D+ + IN LCK V + +G
Sbjct: 473 IQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGL 532
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
PD + YN L+ C V ++ + + M GI N+ Y +++G G I E
Sbjct: 533 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 592
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L E L KG+ + +++ I GL + G A +M + ++
Sbjct: 593 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 2/258 (0%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM + G +V Y++V+ +L K + A L QM + G+ PD Y ++ G
Sbjct: 245 KEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 304
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A +F E+ ++PDV N + LCK ++ + M G PDV +Y
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+L L + +L M GI + T++++I A+ G + +A + E +
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRD 424
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVN 434
G+ + I LC+ G + A+E QM D+ V P + L+ + +
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK 484
Query: 435 TSFIRLVDQILNTPCKME 452
L+ +I+N +++
Sbjct: 485 AK--ELISEIMNNGMRLD 500
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 137/336 (40%), Gaps = 21/336 (6%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P AYH +I+ + ++ I F +I R D+ N
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISEI-MNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
+F +N ++ M+ DG+C+ GK ++ L M
Sbjct: 523 IF----DLTVNVGLHPDAVVYNMLMDGYCLVGKM----------------EKALRVFDAM 562
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
G +V Y ++ K ++ + L + +M GIKP + Y ++++G+
Sbjct: 563 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 622
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
V A+ F E+ G+ + TY++ + GL K + I + + + K D+IT NT+
Sbjct: 623 VPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 682
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ + + R + ++L + G+V TYSIMI L +G + EA + N G
Sbjct: 683 IAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 742
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
S + + + L ++ + +A L ++ +++ S
Sbjct: 743 EPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFS 778
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM + G Y+ V+R L K +A+ + ++++ +K DI+ ++ G+
Sbjct: 630 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 689
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A++LF + GLVP TY++ I L K+ VE M + M+ G +PD
Sbjct: 690 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 749
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
N +++ L K E+ R + ++ + L T +++D +SKG
Sbjct: 750 NHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKG 795
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 166/394 (42%), Gaps = 40/394 (10%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
P ++ ++K ++ D +++ ++K NF++ E I L+ + + +
Sbjct: 290 RPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARL 349
Query: 137 NLFYKIPKF----------------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC 180
L + K R + + A +++ M+ +G D S +L C
Sbjct: 350 VLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYC 409
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+ + E + EM + G ++ SL K+ + +A +L +M +PD
Sbjct: 410 SRGKVF--EAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPD 467
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLG----------------------LVPDVYT 278
V +V+NG+ + KA E+ E+ G +PD T
Sbjct: 468 TVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGIT 527
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y INGLCK +E K M +PD +TY+T + + CK +++ ++K+M+
Sbjct: 528 YTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDME 587
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G LQTY+ +I GL S I E GL +E KG+ ++ I LC+ G +
Sbjct: 588 RNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAK 647
Query: 399 KALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
A+ LL +M DK +SP ++ L+ + DF
Sbjct: 648 DAISLLHEMLDKGISPNVSSFKILIKAFSKSSDF 681
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 142/289 (49%), Gaps = 7/289 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
R +R GF + + M+ T +L++ S+CE R D L ++M + G C
Sbjct: 126 LRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAF--DHALQLFEKMPQKGCCP 183
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++R L + V AL ++N S I +V Y +++ +E +AE L
Sbjct: 184 NEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVV-YNTLVSRFCREEMNNEAERLV 242
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME---ELG-SKPDVITYNTLLQA 320
+ + LG++PDV T+N I+ LC+ V ++ M+ ELG +P+V+T+N +L+
Sbjct: 243 ERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKG 302
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
CK + R LV+ MK G +L+ Y+I + GL G+++EA +L+E + KG+
Sbjct: 303 FCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPN 362
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ ++ + GLC+ ++ A L+ M V P + LL S+
Sbjct: 363 AYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSR 411
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
RD+ D LG + +V + +++ K + DA G++ MK G +
Sbjct: 278 RDMQMDAELGLPRP--------NVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLE 329
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
CY + L G++ + ++A + DE++ G+ P+ YTYN+ ++GLC+ + + ++ M
Sbjct: 330 CYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLM 389
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
G PD + Y+TLL C ++ + ++ EM G N T + ++ L +G
Sbjct: 390 MRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRT 449
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+EA +L++ K + + + GLC+ G + KA E++ +M
Sbjct: 450 LEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEM 494
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 45/352 (12%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y+ ++ L N D ++D + + ++ D + H +
Sbjct: 360 EPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNG-------VYPDTVAYSTLLHGYCSRG 412
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVC-EQRDLSSDELLGFVQ 195
+F A +L+ MI +G + TC+ +L S+ E R L ++E+L Q
Sbjct: 413 KVFE------------AKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEML---Q 457
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK----------------- 238
+M + + V V+ L + ++ A I+++M ++G
Sbjct: 458 KMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHN 517
Query: 239 -----PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
PD + YT ++NG+ +A++ F E+L L PD TY+ +I CKQ +
Sbjct: 518 VSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKIS 577
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ +++ ME G + TYN L+ L ++ + L EMK KGI ++ TY+ +I
Sbjct: 578 SAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNII 637
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
L G +A LL E L+KG+ S F I + + A EL +
Sbjct: 638 TCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFE 689
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 3/242 (1%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
D T + S C+Q +SS +++M++ G + Y +I L ++F+ G
Sbjct: 559 DSVTYDTFIWSFCKQGKISS--AFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYG 616
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
+ ++MK GI PDI Y ++ + A L E+L G+ P+V ++ + I
Sbjct: 617 LKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFS 676
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K ++ + ++ + + + + Y+ + L +L+ +EL + + + L
Sbjct: 677 KSSDFKVACELFEVALNICGRKEAL-YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNF 735
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y +I L + +A LL + ++KG + F I GL +RG R+A EL K+M
Sbjct: 736 MYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRM 795
Query: 408 AD 409
+
Sbjct: 796 ME 797
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 86/199 (43%), Gaps = 3/199 (1%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSD--GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+++R L + V DA+ +++ + P + Y ++L + L+ ++L
Sbjct: 83 SMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDML 142
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ P YT+N+ I+ LC+ + +++ M + G P+ T L++ LC+ +
Sbjct: 143 AARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVK 202
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+ ELV I N Y+ ++ + EA L+E G+ F+ I
Sbjct: 203 QALELVNNNNSCRIA-NRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRI 261
Query: 389 CGLCQRGLVRKALELLKQM 407
LC+ G V +A + + M
Sbjct: 262 SALCRAGKVMEASRIFRDM 280
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 145/308 (47%), Gaps = 20/308 (6%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGK-TCSL 174
+F LI + +RF +++ +F + + I + F + ++ D FC K T L
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
L + ++ +S+D + C VI L K ++ DA N +
Sbjct: 558 QLFDLMQRNKISAD-----------IAVC------NVVIHLLFKCHRIEDASKFFNNLIE 600
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
++PDIV Y ++ G +AE +F+ L V P+ T + I+ LCK N+++
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 660
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
I+M + M E GSKP+ +TY L+ K ++ +L +EM+ KGI ++ +YSI+ID
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL +G + EA + +A++ L + I G C+ G + +A L + M V P
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Query: 415 GARVWEAL 422
+ AL
Sbjct: 781 DDLLQRAL 788
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 159 CMINDGFCVDGKT-CSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
C + +GFC G+ + L V EQR + D ++ Y+ +I
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPD-----------------LIAYSTLIDGYF 332
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K + + +Q G+K D+V ++ ++ + D A ++ +L G+ P+V
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TY + I GLC+ + M + + G +P ++TY++L+ CK L L ++M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
G ++ Y +++DGL+ +G ++ A + L + + +F+ I G C+
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSV 427
+AL++ + M + P + ++ S+
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 127/255 (49%), Gaps = 4/255 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++ + M GF T + ++ + C ++D + + + EM+K +V YT +
Sbjct: 1568 ALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQT--VYALLDEMRKRRCPPNVVTYTIL 1625
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +L K + +AL +++K DG+ PD Y ++ + A + +E+ G+
Sbjct: 1626 MHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGI 1685
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V T+N I+ C + E +K++ MEE PD+ TY LL+ CK + + L
Sbjct: 1686 APNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLF 1745
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LV M K I + TY++++ L G + ++C LEE ++KG + FD + L
Sbjct: 1746 LVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLE 1805
Query: 393 QRGL--VRKALELLK 405
+R L V K +++L+
Sbjct: 1806 KRNLQSVYKKIQVLR 1820
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 134/302 (44%), Gaps = 39/302 (12%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
+++ A A R+ ++++ F+K+ +F G D K +++L ++C+
Sbjct: 1486 VMRRLAGASRWTEAIDAFHKMDRF------------------GVVKDTKAMNVLLDTLCK 1527
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMV-----DYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+R S G QE++ G + + ++ K + +AL + +MK G
Sbjct: 1528 ER--SVKRARGVFQELR------GTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHG 1579
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
P +V YT ++ +++D+ L DE+ P+V TY + ++ L K +
Sbjct: 1580 FSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREAL 1639
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++E G PD YN+L+ L + L +V+EM+ GI N+ T++ +I
Sbjct: 1640 DTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAA 1699
Query: 357 ASKGDIIEACGLL----EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
A LL E++ N + T + + +C C+R V+ L L+ M KD+
Sbjct: 1700 CDHSQAENALKLLVKMEEQSCNPDIKTYTPLL--KLC--CKRQWVKILLFLVCHMFRKDI 1755
Query: 413 SP 414
SP
Sbjct: 1756 SP 1757
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 7/226 (3%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDAL-GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G+C D +++ ++ K K FD + G++NQM G ++ T V+ + + +
Sbjct: 1440 GYCH-CADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTE 1498
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK--PDVITYNTL 317
A + F ++ G+V D NV ++ LCK+ +V+ + +EL PD ++NTL
Sbjct: 1499 AIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVK---RARGVFQELRGTIPPDENSFNTL 1555
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ CK R L + ++EMK G ++ TY+ +++ + D LL+E +
Sbjct: 1556 VHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRC 1615
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + L + G R+AL+ ++ + V+P A + +L+
Sbjct: 1616 PPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLI 1661
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D Y V I G KQ ++ G +I M E+G ++T +++ L +
Sbjct: 1446 DSYDLMVDILGKFKQFDLMWG--LINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAF 1503
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M G+V + + ++++D L + + A G+ +E L + + F+ + G C+
Sbjct: 1504 HKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQE-LRGTIPPDENSFNTLVHGWCKA 1562
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
++++AL+ +++M SP + +L+ + + DF + L+D++ C
Sbjct: 1563 RMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDF--QTVYALLDEMRKRRC 1615
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 183/387 (47%), Gaps = 22/387 (5%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI-----------DLIKTYADA 129
EA+H +I+ L + QF I ++++ +++R+ + F + + IKT+
Sbjct: 121 EAFHALIEALGKIRQFKMIWTLVNDMKQRKLLTSDTFSLVARRYARARKAKEAIKTFEKM 180
Query: 130 HRF--QDSVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ + V+ F K+ + V A E+ + M D K+ +++L +Q++L
Sbjct: 181 EHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQNL 240
Query: 186 -SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+E+ +EM+ GF +V Y ++ + K +K +A+G+ ++MK+ G++P Y
Sbjct: 241 IKVNEV---CREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVY 297
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++NG+ + +A E F+ G VP+ TYN + C ++ +M+ M++
Sbjct: 298 CTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKK 357
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWK--GIVLNLQTYSIMIDGLASKGDI 362
G P+ T++ +L L K R + + + M G ++ TY IM+ ++ +
Sbjct: 358 CGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELL 417
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A + +E KG+ MF +C LC + +A + ++M D + P A+++ L
Sbjct: 418 DMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTL 477
Query: 423 LLSSV-SKLDFVNTSFIRLVDQILNTP 448
+ V + ++ V F +D++ +P
Sbjct: 478 KEALVDAGMEHVAMHFTLKIDKLRKSP 504
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 150/319 (47%), Gaps = 27/319 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLF-------YKIPKFRINRV--------------GFAIE 155
++F LI Y ++ +D++ + +++P +V GF E
Sbjct: 67 YVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEE 126
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
L C G+ ++++ + C+ ++ + + K G +V + ++
Sbjct: 127 SLEC----GYPASLYFFNILMHNFCKGGEIXLAQ--SVFDSITKWGLRPSVVSFNTLMNG 180
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
+K + + + + M++ G++PD+ Y++++NG+ + A LFDE+L GLVP+
Sbjct: 181 YIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPN 240
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
T+ I+G CK V+ +++ M PD+ITYNTL+ LCK +L + ++L+
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLID 300
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EM KG+ + TY+ +IDG +GD+ A + + + + + I LCQ G
Sbjct: 301 EMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEG 360
Query: 396 LVRKALELLKQMADKDVSP 414
A ++L++M + P
Sbjct: 361 RSVDAEKMLREMLSVGLKP 379
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y+ +I L K+ K+ DA + ++M +G+ P+ V +T +++G A E++ ++L
Sbjct: 209 YSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQML 268
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L+PD+ TYN I GLCK+ +++ +I M G KPD ITY TL+ CK +L
Sbjct: 269 SQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E K M + I L+ Y+ +I L +G ++A +L E L+ GL + + I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388
Query: 389 CGLCQRGLVRKALELLKQMADKDVSP 414
C++G V +LLK+M P
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYLP 414
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
GF ++ + M G D T S++++ +C++ + D+ EM G V +T
Sbjct: 190 GFRLK--SVMQASGVQPDVYTYSVLINGLCKESKM--DDANALFDEMLDNGLVPNGVTFT 245
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I K +V A+ I QM S + PD++ Y ++ G+ + D +A++L DE+ +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
GL PD TY I+G CK+ ++E + M + + D + Y L+ LC+
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDA 365
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++++EM G+ + TY+++I+ KGD+ LL+E G
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%)
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++E L G +Y +N+ ++ CK + + + + G +P V+++NTL+
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K+ +L+ L M+ G+ ++ TYS++I+GL + + +A L +E L+ GL
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGV 242
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
F I G C+ G V A+E+ +QM + + P + L+ K D
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDL 292
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A + + M+++G +G T + ++ C+ + D + ++M ++ Y +
Sbjct: 225 ANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRV--DLAMEIYRQMLSQSLLPDLITYNTL 282
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I L KK + A ++++M G+KPD + YT +++G + D A E ++ +
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
D Y I+ LC++ KM+ M +G KP++ TY ++ CK ++ +
Sbjct: 343 RLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 333 LVKEMKWKGIVLNLQT 348
L+KEM+ G + N+ T
Sbjct: 403 LLKEMQRDGYLPNVVT 418
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 141/311 (45%), Gaps = 21/311 (6%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
TP + + L+K + + F + L + + + N V N +IN G CV G+ C
Sbjct: 453 TPNVVTYTTLMKGHINKAAFDKAYAL---LAEMKQNGVSCNDYTYNTLIN-GLCVVGRVC 508
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
E+ ++ + GF + Y ++I +K + A + QM
Sbjct: 509 ----------------EVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+ GI P+IV YT ++G A ++ +++ GL PD+ YN I G C++ N+
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
++++ M + G P++ YN+ + ++ + L ++M +GI L+ TY+ +
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTL 672
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDG + G++ A L E + KG F GLC+ G + A +LL +M D+
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732
Query: 413 SPGARVWEALL 423
P ++ L+
Sbjct: 733 RPNVLMYNMLI 743
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 136/296 (45%), Gaps = 5/296 (1%)
Query: 130 HRFQDSVNLFYKIPKFRINRVGF--AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
H S N F + K +N + A+ + M + G D T ++++ +C++R +
Sbjct: 346 HGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIR- 403
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
E L ++M + G +V Y +++ + +A+ + +M G P++V YT +
Sbjct: 404 -EALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ G I + + KA L E+ G+ + YTYN INGLC V +M+ E G
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P +TYN+++ K + + ++M KGI N+ TY+ IDG A
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L + KGL + ++ I G CQ G + AL++L M + P V+ + +
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
DE + EM GF +V YT +++ + K A +L +MK +G+ + Y +
Sbjct: 438 DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTL 497
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ V + E+ G VP TYN ING K + + + M G
Sbjct: 498 INGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
P+++TY + + CK + +++ +++ KG+ ++ Y+ +I G +G++ A
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQ 617
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+L L GL S+++ I G ++ +AL L ++M + + + L+
Sbjct: 618 VLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLI 673
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 6/295 (2%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ RV E+L +GF T + I++ + + S Q+M G +
Sbjct: 504 VGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS--AFAVYQQMCAKGIPPNI 561
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT+ I K AL +LN ++ G++PDI Y ++ G + + A ++
Sbjct: 562 VTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVL 621
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+L GL+P++ YN +I G +E +++ M + G D TY TL+ K
Sbjct: 622 MLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGN 681
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ +L EM KG + + T++ + GL GDI +A LL+E + M++
Sbjct: 682 VTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNM 741
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL----LSSVSKLDFVNTSF 437
I G + G +++A L +M ++ + P ++ L+ L S S +D N +
Sbjct: 742 LINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKSLGSDSPIDAENPNL 796
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 56/293 (19%)
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
+ D+V LF ++P I D + CS+ ++S+C+ RD ++ L
Sbjct: 193 YDDAVRLFDEMPASEIEP------------------DQRVCSVAIASLCKLRD--ANRAL 232
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+++M+ GF + +V+ LVK ++ +AL I +++ + G K +V T +++G
Sbjct: 233 LVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGY 292
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+Q + KA ++F+E L GLVP TY V I G C EE P+
Sbjct: 293 CLQREVRKALDIFEETLRDGLVPTDVTYTVLIRG---------------CTEE--GMPE- 334
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+ EL ++M+ G++ + ++++I GL + +A L +E
Sbjct: 335 -----------------KAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE 377
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
+ G+ + ++ I LCQR +R+AL L ++M + V P + +LLL
Sbjct: 378 MADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 1/228 (0%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
EM+ G + V+R+ K+ DA+ + ++M + I+PD ++ + +
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
D +A + ++ G VP +T+N ++ L K +E + + + G K V+
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ C RE+ + ++ +E G+V TY+++I G +G +A L + +
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL ++ F+ I GL L + A+ L K+MAD + P A + L+
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILI 393
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%)
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M++ G+ PD T +L A L E+ G D + ++V + K+
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ +++ M +PD + + +LCK+R+ NR ++++M+ G V T++
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++D L G + EA + +E L G + + G C + VRKAL++ ++
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311
Query: 411 DVSPGARVWEALL 423
+ P + L+
Sbjct: 312 GLVPTDVTYTVLI 324
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 158/350 (45%), Gaps = 18/350 (5%)
Query: 80 PEAYHF--VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVN 137
P+AY F +I +Q + D + R F + LI+ +A R ++V
Sbjct: 8 PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLR-GFAQDVVSYATLIEGLCEAGRIDEAVE 66
Query: 138 LFYKIPKFRINRVGFAIE-------------ILNCMINDGFCVDGKTCSLILSSVCEQRD 184
LF ++ + ++ ++ +L M G+ + + ++ C +R
Sbjct: 67 LFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERK 126
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
E + +QEM + G +V T VI + K+ ++ DAL +L MK G KP++ Y
Sbjct: 127 AKEAEEM--LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 184
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ G + KA L +++ G+ PD TYN+ I G C ++E+ +++ ME
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 244
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G D TYN L+ ALCK ++ L ++ +GI N T++ +I+GL G
Sbjct: 245 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 304
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
A LE+ ++ G + + I LC+ ++ L + +M KDV P
Sbjct: 305 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 354
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 149/337 (44%), Gaps = 33/337 (9%)
Query: 109 RENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILN-CMINDGFCV 167
R + + F LI Y ++ + +LF K+P R GFA ++++ + +G C
Sbjct: 3 RSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP-LR----GFAQDVVSYATLIEGLCE 57
Query: 168 DGKTCSLI-LSSVCEQRDLS--------------SDELLGFVQEMKKLGFCFGMVDYTNV 212
G+ + L +Q D+ +E L ++ MK+LG+ Y V
Sbjct: 58 AGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 117
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL-- 270
+ ++ K +A +L +M G+ P +V T V+N Y K + D L VL
Sbjct: 118 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINA------YCKEGRMSDALRVLEL 171
Query: 271 ----GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
G P+V+TYN + G C + V + ++ M G PD +TYN L++ C
Sbjct: 172 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH 231
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ L++ M+ G++ + TY+ +I+ L G +AC L + +G+ + F+
Sbjct: 232 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 291
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G A + L++M +P + + +
Sbjct: 292 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 328
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 11/298 (3%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+V A+ +LN M G D T +L++ C + S ++ M+ G
Sbjct: 195 GKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES--AFRLLRLMEGDGLIADQY 252
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I +L K + A + + +++ GIKP+ V + ++NG+ A + +++
Sbjct: 253 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKM 312
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G PD YTY+ +I LCK + G+ I M + KP + Y ++ L K R
Sbjct: 313 VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNY 372
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ EM G ++ TY+ + +G + EA +L E G+ + ++
Sbjct: 373 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTL 432
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ G G A+ +LKQM P + LL V +RLV+ +L
Sbjct: 433 MDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVR---------MRLVEDVL 481
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 125/334 (37%), Gaps = 54/334 (16%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ A + L M++ G D T S + +C+ + S E L F+ EM + V
Sbjct: 300 GKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK--GSQEGLSFIGEMLQKDVKPSTV 357
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+YT VI L+K+ +M S G PD+V YT + ++ +AE + E+
Sbjct: 358 NYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 417
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ D YN ++G + + ++ M + S P+ TY LL+ L ++R +
Sbjct: 418 SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLV 477
Query: 328 NRLRELVKEMKWKGIVL-----------------NLQTYSIMIDGLASKGDIIEACGLLE 370
+ L WK I L N TYS +++G + G EA L+
Sbjct: 478 EDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVS 537
Query: 371 --------------EALNKGLCTQSSMFDE--TICGLCQRGLV----------------- 397
AL C D +C + Q G +
Sbjct: 538 LMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEG 597
Query: 398 --RKALELLKQMADKDVSPGARVWEALLLSSVSK 429
KA E+ KD SP VW+ ++ + K
Sbjct: 598 QTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 631
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 31/223 (13%)
Query: 232 MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNN 291
M G +PD + ++ G A +LFD++ + G DV +Y I GLC+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 292 V-------------------------------EAGIKMIACMEELGSKPDVITYNTLLQA 320
+ E G+ M+ M+ELG +P Y ++
Sbjct: 61 IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C+ R+ E+++EM KG+ + T + +I+ +G + +A +LE +G
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + G C G V KA+ LL +M V+P A + L+
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLI 223
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 112/292 (38%), Gaps = 25/292 (8%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
G M++ G D T + + + C + L+ E + EM K G + Y
Sbjct: 373 GLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE--NVLMEMSKNGVTVDTMAYN 430
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI---VQEDYV--------K 259
++ + A+ IL QM S P+ Y ++L ++ + ED + K
Sbjct: 431 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 490
Query: 260 AEELFDELLVLGL---------VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
A EL D V GL +P+ TY+ + G + E +++ M+E +
Sbjct: 491 AIELTD---VFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLN 547
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
Y L+ CK + LV M G + L +Y ++ GL +G +A +
Sbjct: 548 EDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFM 607
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
+ K ++ I GL ++G + E++ + + P + + L
Sbjct: 608 NSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 659
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 37/204 (18%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+ + M + F + T S IL E D ++E V MK+ YT ++
Sbjct: 500 LFDVMKKNEFLPNSGTYSSILEGFSE--DGRTEEATSLVSLMKEDSISLNEDIYTALVTC 557
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K ++ DA ++ M G P ++ Y +L+G+I + KA+E+F PD
Sbjct: 558 FCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPD 617
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ V I+GL K+ + + +MI +E + +P
Sbjct: 618 EIVWKVIIDGLIKKGHSDISREMIIMLERMNCRP-------------------------- 651
Query: 336 EMKWKGIVLNLQTYSIMIDGLASK 359
+ QTY+++ + L +
Sbjct: 652 ---------SHQTYAMLTEELPDR 666
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 133/277 (48%), Gaps = 12/277 (4%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A +L+ M +G D T + ++S + L S + QEM + G V Y
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF--YFQEMVECGLNPNPVSY 516
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
T +I K KV AL +L +M+ G P++ Y V+NG+ + + +AE++ D+++
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC---KVRE 326
GL+P+V TY I+GLC+ + K+ ME+ P++ TY++L+ LC K E
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
R+ E+ G L TYS ++ GL KG EA L+++ +G C ++
Sbjct: 637 AERMSEI-------GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 689
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ C+ V AL++ + K ++ AL+
Sbjct: 690 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M G ++ + +I L KK KV +A IL+Q+ + PD+ YT ++ G
Sbjct: 187 KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ A +FD ++ G P+ TY+ INGLC + V+ + M+ M E G +P V TY
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+ ALC + ELV MK +G N+QTY+ +I GL+ G + A GL + L
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+GL + ++ I LC G AL++ M
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
SLIL C R+L D G M K G V Y+ +I L + +V +AL +L +M
Sbjct: 238 SLILGH-CRNRNL--DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
GI+P + YT+ + + E +A EL + G P+V TY I+GL + +
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
E I + M + G P+ +TYN L+ LC + ++ M+ G + N QTY+ +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I GL GDI +A L E+ L G ++ I G +G V A LL M +
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC 474
Query: 413 SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQILN 446
P + L+ S KL+ + F +V+ LN
Sbjct: 475 EPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 129/275 (46%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A+++L MI G T +L ++++C L V MKK G +
Sbjct: 283 RVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL--VARMKKRGCRPNVQT 340
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT +I L + K+ A+G+ ++M +G+ P+ V Y ++N + V + A ++F +
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G + + TYN I GLC ++E + + M ++G P V+TYNTL+ +N
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L+ MK G + TY+ ++ G + G + A +E + GL + I
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + G V AL LLK+M + +P + A++
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 122/242 (50%), Gaps = 2/242 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
YT++I + + A G+ ++M +G P+ V Y+ ++NG+ + +A ++ +E++
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 295
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G+ P VYTY + I LC + E I+++A M++ G +P+V TY L+ L ++ +L
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 355
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
L +M +G+V N TY+ +I+ L G A + G + ++E I
Sbjct: 356 VAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTP 448
GLC G + KA+ L ++M P + L+ ++K + N + RL+D +
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA--RLLDLMKENG 473
Query: 449 CK 450
C+
Sbjct: 474 CE 475
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+G +M K G V Y +I L + AL I + M+ G + Y ++ G
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + D KA LF+++L +G +P V TYN ING + NV +++ M+E G +PD
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
TYN L+ K +L +EM G+ N +Y+ +IDG + G + A LL+
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLK 537
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G ++ I GL + +A ++ +M ++ + P + L+
Sbjct: 538 RMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ ++ AI + + M+ +G + T + +++ +C S+ L M+ G
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA--LKIFHWMEGHGSLAN 407
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y +I+ L + A+ + +M G P +V Y ++NG + + + A L D
Sbjct: 408 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 467
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G PD +TYN ++G K +E+ M E G P+ ++Y L+ K
Sbjct: 468 LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDG 527
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+++ L+K M+ G N+++Y+ +I+GL+ + EA + ++ + +GL +
Sbjct: 528 KVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYT 587
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I GLC+ G + A ++ M + P + +L+
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 119/270 (44%), Gaps = 31/270 (11%)
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
+D D L ++ M+++G + Y VI L K+ + +A I ++M G+ P+
Sbjct: 523 HSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDEL--------------LVLGLV------------- 273
++ YT +++G+ A ++F ++ L+ GL
Sbjct: 583 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSE 642
Query: 274 ----PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
P + TY+ ++GLC++ +++ M+E G PD Y +LL A CK E++
Sbjct: 643 IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDH 702
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
++ ++ KG L+L Y +I L G + EA L + L K ++ +
Sbjct: 703 ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 762
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVW 419
GL + G + ++LL M K+ +P + +
Sbjct: 763 GLLKEGELDLCMKLLHIMESKNFTPNIQTY 792
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 30/282 (10%)
Query: 63 ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FID 121
I SLL C P E+Y+ VI L++ ++F + + D + E P I +
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM--VEQGLLPNVITYTT 588
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGK--------- 170
LI R Q + +F+ + K + N ++ I G C +GK
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY------GLCQEGKADEAERMSE 642
Query: 171 --------TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKV 222
T S ++S +C + E L V++MK+ GFC Y +++ + K +V
Sbjct: 643 IGCEPTLDTYSTLVSGLCRKGRFYEAEQL--VKDMKERGFCPDREIYYSLLIAHCKNLEV 700
Query: 223 FDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVY 282
AL I + +++ G + + Y ++ + +A+ LFD +L D + V
Sbjct: 701 DHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVL 760
Query: 283 INGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++GL K+ ++ +K++ ME P++ TY L + L ++
Sbjct: 761 VDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRI 802
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
+++A E+ R+ + + E+ G +L + + ++ LA + A L ++ LN G
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV--SKLDFVN 434
+ F+ I L ++G VR+A +L Q+ D+SP + +L+L LD
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253
Query: 435 TSFIRLVDQ 443
F R+V +
Sbjct: 254 GVFDRMVKE 262
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 141/310 (45%), Gaps = 39/310 (12%)
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK---KEKVFD 224
D T ++++S +C+ L ++M+ G +V Y +I K K++
Sbjct: 187 DKFTFNIVISGLCKTGQLRKAG--DVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYH 244
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+L +M GI P++V + +++NG + + A ++F+E+ G+ ++ TY ++
Sbjct: 245 VDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVS 304
Query: 285 GLCKQNNVEAGIKMIACMEELG----------------------------------SKPD 310
GLC++ VE +K++ MEELG KP+
Sbjct: 305 GLCREGKVEDSMKLVEEMEELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPN 364
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V+TYNTL+ ++ ++ M KGI +++TY+ +I G + D GLL+
Sbjct: 365 VVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLD 424
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKL 430
E G+ ++ I LC +G VRKA++LL +M + + P R + A++ K
Sbjct: 425 EMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKG 484
Query: 431 DFVNTSFIRL 440
D IR+
Sbjct: 485 DAKGAHDIRI 494
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 129/252 (51%), Gaps = 3/252 (1%)
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
+L M G + T +++++ C++ ++++ + +EM++ G MV YT+++
Sbjct: 248 LLKEMNQAGISPNVVTFNVLINGYCKESNITA--AIKVFEEMRQHGIPANMVTYTSLVSG 305
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
L ++ KV D++ ++ +M+ G+ + VLNG + V+AE D + G+ P+
Sbjct: 306 LCREGKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPN 364
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V TYN I+G + ++ M G PDV TYN L+ + + L+
Sbjct: 365 VVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLD 424
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
EMK G+ +L TY+++I L KG++ +A LL+E + GL + ++ I G C++G
Sbjct: 425 EMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKG 484
Query: 396 LVRKALELLKQM 407
+ A ++ +M
Sbjct: 485 DAKGAHDIRIRM 496
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 78/134 (58%)
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
G+L++MK G+K D+V Y +++ + + + KA +L DE++ +GL P TYN ING
Sbjct: 421 GLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGF 480
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C++ + + + ME+ + +V+T N L+ CK+ +++ ++ EM KG+V N
Sbjct: 481 CEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNR 540
Query: 347 QTYSIMIDGLASKG 360
TY I+ G+ KG
Sbjct: 541 ITYEIINSGMIEKG 554
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE- 332
PD +T+N+ I+GLCK + + M G P V+TYNTL+ K ++
Sbjct: 186 PDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHV 245
Query: 333 --LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
L+KEM GI N+ T++++I+G + +I A + EE G+ + + G
Sbjct: 246 DMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSG 305
Query: 391 LCQRGLVRKALELLKQM 407
LC+ G V +++L+++M
Sbjct: 306 LCREGKVEDSMKLVEEM 322
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 81/174 (46%), Gaps = 5/174 (2%)
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
P ++ N + L + + V+ + PD T+N ++ LCK +L + ++
Sbjct: 151 PSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDV 210
Query: 334 VKEMKWKGIVLNLQTYSIMIDGL---ASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
K+M+ G++ ++ TY+ +IDG G + LL+E G+ F+ I G
Sbjct: 211 AKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLING 270
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
C+ + A+++ ++M + P V L+S + + V S ++LV+++
Sbjct: 271 YCKESNITAAIKVFEEMRQHGI-PANMVTYTSLVSGLCREGKVEDS-MKLVEEM 322
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 5/306 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + GFA +L M+ GF + +++L +C R+L + + ++EM++
Sbjct: 119 QMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLC--RNLEFGKAVSLLREMRQNSLMPD 176
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y VIR + +++ AL + N+M+ G +V + ++++ +A L
Sbjct: 177 VVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLK 236
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ GL D+ Y I G C ++ G + + E G P ITYNTL++ CK+
Sbjct: 237 EMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L E+ + M +G+ N+ TY+ +IDGL G EA LL L K ++
Sbjct: 297 RLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYN 356
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS---FIRLVD 442
I LC+ LV ALE+++ M + P + +LL +K D S ++ L D
Sbjct: 357 IIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKD 416
Query: 443 QILNTP 448
P
Sbjct: 417 SSYTDP 422
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 153/334 (45%), Gaps = 41/334 (12%)
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
G A+ +L M + D + + ++ CE ++L ++ L EM+ G + +V +
Sbjct: 159 GKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKEL--EKALQLANEMQGSGCSWSLVTWG 216
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I + K K+ +A+G+L +MK G++ D++ YT ++ G + + + LFDE+L
Sbjct: 217 ILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G P TYN I G CK ++ ++ M E G +P+V TY L+ LC V +
Sbjct: 277 GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 331 RELVKEMKWKGIVLNLQTYSIMID-----------------------------------G 355
+L+ M K N+ TY+I+I+ G
Sbjct: 337 LQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGG 396
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSM--FDETICGLCQRGLVRKALELLKQMADKDVS 413
L +KGD+ EA LL L T + F+ I GLC+ + +AL++ + +K +
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEK-LG 455
Query: 414 PGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
G V +LL+S K VN + + L QI N+
Sbjct: 456 AGDIVTTNILLNSTLKSGDVNKA-MELWKQISNS 488
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 113/231 (48%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F ++M + V + ++ V+ K A G+L M G ++ Y ++L G+
Sbjct: 94 FYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLC 153
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
++ KA L E+ L+PDV +YN I G C+ +E +++ M+ G ++
Sbjct: 154 RNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLV 213
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+ L+ A CK +++ L+KEMK KG+ +L Y+ +I G G++ L +E
Sbjct: 214 TWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +G + ++ I G C+ G +++A E+ + M ++ V P + L+
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLI 324
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A+EI+ M D T + +L +C + DL L ++ ++ +
Sbjct: 368 VADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISF 427
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L K ++ AL I + + DIV ++LN + D KA EL+ ++
Sbjct: 428 NALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISN 487
Query: 270 LGLVPDVYTYNVYINGLCKQN--NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+VP+ TY I+G CK NV G+ + EL P V YN LL +LCK L
Sbjct: 488 SKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSEL--PPSVFDYNCLLSSLCKKGTL 545
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++ L +EM+ ++ +++IMIDG GDI A LL + GL + +
Sbjct: 546 DQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKL 605
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
I + G + +A+ +M D P A + +++L +S+
Sbjct: 606 INRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQ 647
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
DY ++ SL KK + A + +M+ D PD++ + ++++G + D AE L +
Sbjct: 531 DYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GL PD++TY+ IN K ++ I M + G +PD +++L+ E
Sbjct: 591 SHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGET 650
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGL-ASKGDIIEACGLLEEALNK 375
++L E VK++ K +VL+ + ++D + +S G++ A LL A +K
Sbjct: 651 DKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVADDK 699
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 118/272 (43%), Gaps = 24/272 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDS 135
EP Y+ +I L ++S D +++ ++KR P+ I + L+ ++
Sbjct: 349 EPNVVTYNIIINKLCKDSLVADALEIVELMKKRRT--RPDNITYNSLLGGLCAKGDLDEA 406
Query: 136 VNLFYKIPK-------------------FRINRVGFAIEILNCMINDGFCVDGKTCSLIL 176
L Y + K + NR+ A++I + ++ D T +++L
Sbjct: 407 SKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILL 466
Query: 177 SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+S + D+ ++ + +++ YT +I K + A G+L +M+
Sbjct: 467 NSTLKSGDV--NKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSE 524
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
+ P + Y +L+ + + +A LF+E+ PDV ++N+ I+G K ++++
Sbjct: 525 LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAE 584
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELN 328
++ M G PD+ TY+ L+ K+ L+
Sbjct: 585 SLLVGMSHAGLSPDLFTYSKLINRFLKLGYLD 616
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 60/147 (40%)
Query: 277 YTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKE 336
+ N + L + N E M E + + ++ + LL+ ++R+ ++
Sbjct: 73 FAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLAL 132
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
M +G N+ Y+I++ GL + +A LL E L ++ I G C+
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
+ KAL+L +M S W L+
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILI 219
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 9/266 (3%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
C++ND T ++++S + + L + L + K F Y +I +L+
Sbjct: 275 GCLLND------VTYNVVISFLAREGHLENAAKLVDSMRLSKKASSF---TYNPLITALL 325
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
++ V + +M+++GI P +V Y +++G++ E A+ F E+ +GL+PD+
Sbjct: 326 ERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLI 385
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TYN +NG CK N++ + ++ + G P V+TYNTL+ C++ L R L +EM
Sbjct: 386 TYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEM 445
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+G ++ TY+I+++G ++ A +E L+KGL ++ IC G
Sbjct: 446 VEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDT 505
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
KA +L + M K + P + ++
Sbjct: 506 HKAFQLREVMMLKGIYPDTVTYNVII 531
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 113/239 (47%), Gaps = 7/239 (2%)
Query: 192 GFVQ-------EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
GFVQ EM+ G +V Y +I L+K E+V A +M++ G+ PD++ Y
Sbjct: 328 GFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITY 387
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+LNG + +A L +L GL P V TYN I+G C+ +E ++ M E
Sbjct: 388 NSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVE 447
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PDV TY L+ KVR L RE EM KG+ + Y+ I GD +
Sbjct: 448 QGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHK 507
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A L E + KG+ + ++ I GLC+ G ++ A +L +M + P + L+
Sbjct: 508 AFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLI 566
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 159/350 (45%), Gaps = 29/350 (8%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSV 136
P Y+ +I L ++ Q ++ L E R P+ I + ++ Y A ++++
Sbjct: 347 PTLVTYNAIIHGLLKSEQV--EAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEAL 404
Query: 137 NLFYKIPKFRINRVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
L + R G A +L N +I DG+C L + E R L
Sbjct: 405 WLLGDL-----RRAGLAPTVLTYNTLI-DGYCR--------LGGLEEARRLK-------- 442
Query: 195 QEMKKLGFCFGMV-DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+EM + G CF V YT ++ K + A ++M S G++PD Y + ++
Sbjct: 443 EEMVEQG-CFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELI 501
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D KA +L + +++ G+ PD TYNV I+GLCK N++ + M G +PD IT
Sbjct: 502 LGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCIT 561
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y L+ A C+ L+ R+L+ M G+ ++ TY+I+I +G++ A G + L
Sbjct: 562 YTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKML 621
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+ ++ I LC+ G A +M ++ ++P + L+
Sbjct: 622 DVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLI 671
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 138/302 (45%), Gaps = 12/302 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS-DELLGFVQEMKKLGFCFGMVDYTN 211
A ++ C G D + C+ +L + RD + D++ +EM +L +V Y
Sbjct: 195 AFRVVAC---HGVAPDVRDCNCVLRVL---RDAARWDDVRAVYREMLQLEIEPTIVTYNT 248
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIK--PDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
++ S +K+ + +A +L +M++ G + V Y +V++ + + A +L D +
Sbjct: 249 LLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR- 307
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
L +TYN I L ++ V+ + ME G P ++TYN ++ L K ++
Sbjct: 308 LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEA 367
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ EM+ G++ +L TY+ M++G G++ EA LL + GL ++ I
Sbjct: 368 AQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 427
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSS--VSKLDFVNTSFIRLVDQILNT 447
G C+ G + +A L ++M ++ P + L+ S V L F ++ + L
Sbjct: 428 GYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQP 487
Query: 448 PC 449
C
Sbjct: 488 DC 489
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 3/218 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ M+ G D T ++I+ +C+ +L + L +M G + YT +
Sbjct: 508 AFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKM--KMVSDGLQPDCITYTCL 565
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + ++ + +A +LN M SDG++P +V YT++++ + + A F ++L +G+
Sbjct: 566 IHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGI 625
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+ TYNV I+ LC+ M E G P+ TY L+ C+
Sbjct: 626 EPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIR 685
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
L EM GI + T++ + G KG + A LE
Sbjct: 686 LYFEMHQNGIPPDYCTHNALFKGF-DKGHMYHAIEYLE 722
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 124/241 (51%), Gaps = 2/241 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y VI + +V A + M GI P++V YT+V++G+ + +AE +F
Sbjct: 204 LVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQ 263
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ G+ P++ TY I+G + ++M+ M G +PD TY LL LCK
Sbjct: 264 QMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKG 323
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ R+L M KGI ++ Y I++ G A+KG + E L+ + G+ +F+
Sbjct: 324 KCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFN 383
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
C ++ ++ +A+++ +M + +SP V A L+ ++ KL V+ + ++ +Q++
Sbjct: 384 IVFCAFAKKAMIGEAMDIFNKMRQQGLSPNV-VNYATLIDALCKLGRVDDAELKF-NQMI 441
Query: 446 N 446
N
Sbjct: 442 N 442
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%)
Query: 189 ELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVL 248
E + +M++ G +V+Y +I +L K +V DA NQM ++G+ P+IV +T ++
Sbjct: 397 EAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLV 456
Query: 249 NGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G+ + + KA ELF E++ G+ P+V +N + LC + V ++I ME +G++
Sbjct: 457 YGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTR 516
Query: 309 PDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
PD+I+YN L++ C V + + +L+ M G+ N TY+ ++ G G I +A +
Sbjct: 517 PDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSV 576
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
+E L+ G+ ++ + GL + +A EL M
Sbjct: 577 FQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 20/333 (6%)
Query: 114 TPEFI-FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
TP + + L+K + D +R ++++ L + + ++ + N +IN GF +G+
Sbjct: 163 TPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN-GFFTEGQV- 220
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
D+ +M G +V YT VI L K + V A G+ QM
Sbjct: 221 ---------------DKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQM 265
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G++P+IV YT +++G + + + + E+ GL PD +TY + ++ LCK+
Sbjct: 266 IDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKC 325
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
K+ M G KPDV Y +L L+ + + M GI N ++I+
Sbjct: 326 TEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIV 385
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
A K I EA + + +GL + I LC+ G V A QM ++ V
Sbjct: 386 FCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445
Query: 413 SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+P V+ +L+ L ++ K + F +V+Q
Sbjct: 446 APNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ 478
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 20/285 (7%)
Query: 147 INRVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
+ RVG +I+ N +I G C+ GKT DE + M +G
Sbjct: 510 MERVGTRPDIISYNALIR-GHCLVGKT----------------DEASKLLDIMLSVGLKP 552
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
Y ++ + ++ DA + +M S+GI P +V Y +L+G+ + +A+EL+
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELY 612
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ G +YTYN+ +NGL K N V+ +KM + + D+IT+N ++ AL K
Sbjct: 613 LNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKD 672
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L + G+V ++ TY ++ + L +G + E G+ E G S M
Sbjct: 673 GRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLML 732
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ + L RG + +A L ++ +K+ S A ++L+S S+
Sbjct: 733 NFLVRRLLLRGDISRAGAYLSKIDEKNFSLEAST-TSMLISLFSR 776
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 153/361 (42%), Gaps = 20/361 (5%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P Y ++ A ++ S LD + +IF + +A +++
Sbjct: 341 KPDVSIYGIILHGYATKGALSEMHSFLD-LMVGNGISPNHYIFNIVFCAFAKKAMIGEAM 399
Query: 137 NLFYKIPK--FRINRVGFAIEI---------------LNCMINDGFCVDGKTCSLILSSV 179
++F K+ + N V +A I N MIN+G + + ++ +
Sbjct: 400 DIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGL 459
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C L F EM G +V + ++ +L + +V A +++ M+ G +P
Sbjct: 460 CTIDKWEKAGELFF--EMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRP 517
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
DI+ Y ++ G + +A +L D +L +GL P+ TYN ++G C+ ++ +
Sbjct: 518 DIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVF 577
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
M G P V+TYNT+L L K R + +EL M G ++ TY+I+++GL+
Sbjct: 578 QEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKN 637
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ EA + + +K L F+ I L + G A+ L ++ + P +
Sbjct: 638 NCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTY 697
Query: 420 E 420
Sbjct: 698 R 698
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 111/238 (46%), Gaps = 6/238 (2%)
Query: 189 ELLGFVQEMKKLGF---CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
E++ ++EM G CF Y ++ L KK K +A + + M GIKPD+ Y
Sbjct: 292 EVVRMLKEMSAHGLEPDCF---TYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYG 348
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++L+G + + D ++ G+ P+ Y +N+ K+ + + + M +
Sbjct: 349 IILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQ 408
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P+V+ Y TL+ ALCK+ ++ +M +G+ N+ ++ ++ GL + +A
Sbjct: 409 GLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKA 468
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E +N+G+ F+ +C LC G V KA L+ M P + AL+
Sbjct: 469 GELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALI 526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 124/271 (45%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + MI G D +IL + LS E+ F+ M G + V
Sbjct: 328 ARKLFDSMIRKGIKPDVSIYGIILHGYATKGALS--EMHSFLDLMVGNGISPNHYIFNIV 385
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ KK + +A+ I N+M+ G+ P++V Y +++ + AE F++++ G+
Sbjct: 386 FCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P++ + + GLC + E ++ M G P+V+ +NT++ LC + + +
Sbjct: 446 APNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQR 505
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ M+ G ++ +Y+ +I G G EA LL+ L+ GL ++ + G C
Sbjct: 506 LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + A + ++M ++P + +L
Sbjct: 566 RDGRIDDAYSVFQEMLSNGITPVVVTYNTIL 596
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIAC------------------------------ 301
+ PDV+TY++ + C+ +E G
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149
Query: 302 -------MEELGSKPDVITYNTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQTYSI 351
M ELG P+V++YNTLL+ C + E L ++ + + + NL +Y+
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I+G ++G + +A L + ++G+ + I GLC+ +V +A + +QM DK
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269
Query: 412 VSPGARVWEALLLSSVS 428
V P + L+ +S
Sbjct: 270 VRPNIVTYTCLIHGYLS 286
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 162/365 (44%), Gaps = 24/365 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFID-LIKTYADAHRFQ 133
+ EP Y+ +I L + + +LD +E F P + ++ ++ A + +
Sbjct: 117 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF--PNLLTVNIMVDRLCKARKLE 174
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++ YKI + R + C + DG G+ DE
Sbjct: 175 EA----YKIFESASQRGCNPDCVTYCSLIDGLGKKGQV----------------DEAYRL 214
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++M G V YT++IR+ + D I ++ G KPD+ ++ V
Sbjct: 215 FEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFK 274
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ K +F+++ G +PDV +Y++ I+GL K + M++ G D
Sbjct: 275 AGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARA 334
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN ++ CK ++++ E+++EMK K + + TY ++DGLA + EA L EEA
Sbjct: 335 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 394
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFV 433
+KG+ ++ I G + G + +A +L++M K ++P W + LL ++ K + +
Sbjct: 395 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS-LLDALVKAEEI 453
Query: 434 NTSFI 438
N + +
Sbjct: 454 NEALV 458
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 164/339 (48%), Gaps = 19/339 (5%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDIS---SVLDHIEKRENFETPE 116
P + +SL+ +F I+ E H + K L D++ + +D + K E
Sbjct: 226 NPVVYTSLIRNFFIHG---RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGR 282
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE---ILNCMINDGFCVDGKTCS 173
IF D I++Y F V Y I + + G A E I + M GF +D + +
Sbjct: 283 MIFED-IRSYG----FLPDVRS-YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYN 336
Query: 174 LILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++ C+ + + E+L +EMK+ + Y ++ L K +++ +A + +
Sbjct: 337 AVVDGFCKSGKVHKAYEIL---EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 393
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
KS GI+ ++V Y+ +++G +A + +E++ GL P+VYT+N ++ L K +
Sbjct: 394 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 453
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ M+E+ P+ TY+ L+ LC+V++ N+ ++M+ +G+V N+ TY+ M
Sbjct: 454 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 513
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
I GLA G+I +A L E G ++ F+ I G+
Sbjct: 514 ISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 552
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
I ++S G PD+ Y+++++G+ + +F + G D YN ++G C
Sbjct: 284 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 343
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K V +++ M+E +P V TY ++ L K+ L+ L +E K KGI LN+
Sbjct: 344 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
YS +IDG G I EA +LEE + KGL ++ + L + + +AL + M
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 463
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNTSFI 438
+ P + ++L++ + ++ N +F+
Sbjct: 464 KEMKCPPNTYTY-SILINGLCRVQKYNKAFV 493
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 153/374 (40%), Gaps = 20/374 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S S C P Y +I L + Q + + + + + P ++ LI+ +
Sbjct: 179 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP-VVYTSLIRNF 237
Query: 127 ADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVDG 169
R +D +F ++ + F+ V I + + GF D
Sbjct: 238 FIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 297
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
++ S+++ + + + E MK+ GF Y V+ K KV A IL
Sbjct: 298 RSYSILIHGLTKAG--QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 355
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+MK ++P + Y +++G+ + +A LF+E G+ +V Y+ I+G K
Sbjct: 356 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 415
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
++ ++ M + G P+V T+N+LL AL K E+N + MK N TY
Sbjct: 416 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 475
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
SI+I+GL +A ++ +GL + I GL + G + A L ++
Sbjct: 476 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 535
Query: 410 KDVSPGARVWEALL 423
P A + AL+
Sbjct: 536 NGGIPDAASFNALI 549
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F E+K G V YT++I L K ++ +A + QM+++ P Y ++ G
Sbjct: 5 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ A +L + L G +P V ++N + L K+ V+ + + M++ ++P+
Sbjct: 65 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSS 123
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TYN ++ LC + ++ EM+ + NL T +IM+D L + EA + E A
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+G + I GL ++G V +A L ++M D + V+ +L+
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI 234
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
A +++K+ G+KPD V YT ++ + +AEELF ++ VP Y YN I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
G E K++ + E G P V+++N++L L K R+++ L + MK K
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 120
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEE----ALNKGLCTQSSMFDETICGLCQRGLVRKA 400
N TY+I+ID L G + EA +L+E +L L T + M D LC+ + +A
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDR----LCKARKLEEA 176
Query: 401 LELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
++ + + + +P + + L+ + K V+ ++ RL +++L+
Sbjct: 177 YKIFESASQRGCNPDCVTYCS-LIDGLGKKGQVDEAY-RLFEKMLDA 221
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
++ +++ G +V + +++ L KK KV +AL + MK D +P+ Y ++++ +
Sbjct: 75 LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLC 133
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ +A + DE+ L P++ T N+ ++ LCK +E K+ + G PD +
Sbjct: 134 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 193
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
TY +L+ L K +++ L ++M G N Y+ +I G + + +E
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +G ++ + + + + G V K + + + P R + L+
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 304
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 148/295 (50%), Gaps = 7/295 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
A +++N M F + + I++ +C+ Q + + L ++E + + Y
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR---YSMSCTSYN 594
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
++I VK A+ +M +G P++V +T ++NG A E+ E+ +
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
L D+ Y I+G CK+N+++ + + + ELG P+V YN+L+ + +++
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L K+M GI +L TY+ MIDGL G+I A L E L+ G+ + + G
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
L ++G KA ++L++M KDV+P ++ + +++ + +N +F RL D++L
Sbjct: 775 LSKKGQFLKASKMLEEMKKKDVTPNVLLY-STVIAGHHREGNLNEAF-RLHDEML 827
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 155/353 (43%), Gaps = 20/353 (5%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y +I +N + V++ + NFE E I+ +I + +
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNA-SNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+ + K + R + N +I DGF G T D + +E
Sbjct: 575 EMLQNLIKEK--RYSMSCTSYNSII-DGFVKVGDT----------------DSAVETYRE 615
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M + G +V +T++I K ++ AL + ++MKS +K D+ Y +++G + D
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
A LF EL LGL+P+V YN I+G ++A I + M G D+ TY T
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
++ L K +N +L E+ GIV + + ++++GL+ KG ++A +LEE K
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ ++ I G + G + +A L +M +K + V+ L+ V K
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 34/254 (13%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+E + + EM G ++ T+++ K ++ AL + N+M+ +G+ PD V ++++
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVM 386
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING---------------------- 285
+ + KA E + + + + P + I G
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI 446
Query: 286 ------------LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
CKQ V+A + ME+ G +P+V+ YN ++ A C+++ ++ R +
Sbjct: 447 AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSI 506
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
EM KG+ N TYSI+IDG D A ++ + +++ I GLC+
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK 566
Query: 394 RGLVRKALELLKQM 407
G KA E+L+ +
Sbjct: 567 VGQTSKAKEMLQNL 580
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K+ KV A L M+ GI+P++V Y ++ ++ A +F E+L GL P+ +
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
TY++ I+G K + + +I M + + + YNT++ LCKV + ++ +E+++ +
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 338 -KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
K K ++ +Y+ +IDG GD A E G F I G C+
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
+ ALE+ +M ++ + AL+
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALI 667
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 116/232 (50%), Gaps = 1/232 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
V K+ GF + ++ + ++ +++ A+ M + P + VL+ ++
Sbjct: 156 LVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLV 215
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A+E++++++++G+ D T + + ++ E +K+ + G++PD +
Sbjct: 216 RSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGL 275
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWK-GIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
++ +QA CK +L +L++EM+ K G+ + +TY+ +I +G++ EA +++E
Sbjct: 276 LFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDE 335
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G+ + G C+ + KAL+L +M ++ ++P ++ ++
Sbjct: 336 MVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 125/278 (44%), Gaps = 6/278 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N +G A+++ N M +G D S+++ C +++ ++ + F MK + V
Sbjct: 359 NELGKALDLFNRMEEEGLAPDKVMFSVMVEWFC--KNMEMEKAIEFYMRMKSVRIAPSSV 416
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+I+ +K E AL I N I +C + L + ++ V A F ++
Sbjct: 417 LVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL--LFCKQGKVDAATSFLKM 474
Query: 268 LVL-GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ P+V YN + C+ N++ + + M E G +P+ TY+ L+ K ++
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFD 385
+++ +M N Y+ +I+GL G +A +L+ + + + S + ++
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G + G A+E ++M++ SP + +L+
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 81/165 (49%), Gaps = 7/165 (4%)
Query: 142 IPKFR-INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD--LSSDELLGFVQEMK 198
I FR + ++ AI++ M+NDG D T + ++ + + + L+SD E+
Sbjct: 702 ISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD----LYSELL 757
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
LG + + ++ L KK + A +L +MK + P+++ Y+ V+ G + +
Sbjct: 758 DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLN 817
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+A L DE+L G+V D +N+ ++G ++ + I +A E
Sbjct: 818 EAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLASPE 862
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 37/311 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ A+E+L M +D S+I+ +C +D S D EM+ GF ++
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLC--KDGSLDNAFNLFNEMEIKGFKADII 283
Query: 208 DYTNVIRSL-----------------------------------VKKEKVFDALGILNQM 232
YT +IR VK+ K+ +A + +M
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
GI PD V YT +++G + KA + D ++ G P++ T+N+ ING CK N +
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ G+++ M G D +TYNTL+Q C++ +L +EL +EM + + ++ +Y I+
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+DGL G+ +A + E+ + +++ I G+C V A +L + K V
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 413 SPGARVWEALL 423
P + + ++
Sbjct: 524 KPDVKTYNIMI 534
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 116/236 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +L ++M+ G + + +I + K+ A + ++ G +PD V ++ +
Sbjct: 89 DLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL 148
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ ++ +A EL D ++ +G P + T N +NGLC V + +I M E G
Sbjct: 149 INGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+ +TY +L+ +CK + EL+++M+ + I L+ YSI+IDGL G + A
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E KG ++ I G C G +LL+ M + ++P + AL+
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 170/364 (46%), Gaps = 27/364 (7%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y +I L ++ + ++ + +E + F+ I+ LI+ + A R+ D L +
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 143 PKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKL 200
K +I + V F+ +++C + +G + E +L +EM +
Sbjct: 309 IKRKITPDVVAFS-ALIDCFVKEG-------------KLREAEELH--------KEMIQR 346
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
G V YT++I K+ ++ A +L+ M S G P+I + +++NG
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
ELF ++ + G+V D TYN I G C+ +E ++ M +PD+++Y LL
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
LC E + E+ ++++ + L++ Y+I+I G+ + + +A L KG+
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
++ I GLC++G + +A L ++M + SP + L+ + + + D ++ +L
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA--KL 584
Query: 441 VDQI 444
+++I
Sbjct: 585 IEEI 588
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ A + +I G+ D T S +++ +C + +S E L V M ++G
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVS--EALELVDRMVEMGHKPT 176
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ ++ L KV DA+ ++++M G +P+ V Y VL + A EL
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + D Y++ I+GLCK +++ + ME G K D+I Y TL++ C
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +L+++M + I ++ +S +ID +G + EA L +E + +G+ + +
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ + KA +L M K P R + L+
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 6/255 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S++++ C R LS L F + ++ KLG+ V ++ +I L + +V +AL +
Sbjct: 109 TLSIMINCCCRCRKLS----LAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALEL 164
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+++M G KP ++ ++NG+ + A L D ++ G P+ TY + +CK
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
++++ MEE K D + Y+ ++ LCK L+ L EM+ KG ++
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ +I G G + LL + + + + F I + G +R+A EL K+M
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 409 DKDVSPGARVWEALL 423
+ +SP + +L+
Sbjct: 345 QRGISPDTVTYTSLI 359
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 15/276 (5%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N++ A +L+ M++ G + +T +++++ C+ + D+ L ++M G V
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI--DDGLELFRKMSLRGVVADTV 423
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I+ + K+ A + +M S ++PDIV Y ++L+G+ + KA E+F+++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ D+ YN+ I+G+C + V+ + + G KPDV TYN ++ LCK L
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L ++M+ G N TY+I+I +GD ++ L+EE G +S
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST---- 599
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+R AL L +M P + LL
Sbjct: 600 ---------LRFALSTLARMLKAGHEPDVFTFTTLL 626
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 170/393 (43%), Gaps = 53/393 (13%)
Query: 53 QQQQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENF 112
++ Q+ K H+L ++ C P ++ +I + +C + + D +E
Sbjct: 364 KENQLDKANHMLDLMVSK----GCGPNIRTFNILI------NGYCKANLIDDGLEL---- 409
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
F + L AD + + F ++ K + A E+ M++ D +
Sbjct: 410 ----FRKMSLRGVVADTVTYNTLIQGFCELGKLEV-----AKELFQEMVSRRVRPDIVSY 460
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++L +C+ + ++ L ++++K + Y +I + KV DA + +
Sbjct: 461 KILLDGLCDNGE--PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G+KPD+ Y +++ G+ + +A+ LF ++ G P+ TYN+ I + +
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 293 EAGIKMI----------------------ACMEELGSKPDVITYNTLLQALC--KVRELN 328
K+I A M + G +PDV T+ TLL+ C + +
Sbjct: 579 TKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVY 638
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET- 387
L K MK G N+ TY+ +I GL + I + G+L++ +G C +++ T
Sbjct: 639 DAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERG-CQPNAVTKSTF 697
Query: 388 ICGLCQRGLVRKALELLKQMA--DKDVSPGARV 418
I GLC++ L A+ LL++M ++DV+ ++
Sbjct: 698 ISGLCKQDLHGSAILLLRKMENDNEDVTTKKKI 730
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G V Y +RS + K DA+ + +M +P ++ ++ + + V + Y +L
Sbjct: 36 GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++ + G+ ++YT ++ IN C+ + + + +LG +PD +T++TL+ LC
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
++ ELV M G L T + +++GL G + +A L++ + G +
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+ +C+ G A+ELL++M ++ + A V ++++ + K ++ +F
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDA-VKYSIIIDGLCKDGSLDNAF 267
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE--K 221
GF VD T LS++ M K G + +T ++R +E
Sbjct: 592 GFSVDASTLRFALSTL---------------ARMLKAGHEPDVFTFTTLLRPFCLEENAS 636
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
V+DA + MK+ G KP++V Y V+ G++ + + D++ G P+ T +
Sbjct: 637 VYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKST 696
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+I+GLCKQ+ + I ++ ME DV T +L
Sbjct: 697 FISGLCKQDLHGSAILLLRKMEN--DNEDVTTKKKIL 731
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 127/255 (49%), Gaps = 4/255 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A++ + M GF T + ++ + C ++D + + + EM+K +V YT +
Sbjct: 1609 ALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQT--VYALLDEMRKRRCPPNVVTYTIL 1666
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ +L K + +AL +++K DG+ PD Y ++ + A + +E+ G+
Sbjct: 1667 MHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGI 1726
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+V T+N I+ C + E +K++ MEE PD+ TY LL+ CK + + L
Sbjct: 1727 APNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLF 1786
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
LV M K I + TY++++ L G + ++C LEE ++KG + FD + L
Sbjct: 1787 LVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLE 1846
Query: 393 QRGL--VRKALELLK 405
+R L V K +++L+
Sbjct: 1847 KRNLQSVYKKIQVLR 1861
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 134/302 (44%), Gaps = 39/302 (12%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE 181
+++ A A R+ ++++ F+K+ +F G D K +++L ++C+
Sbjct: 1527 VMRRLAGASRWTEAIDAFHKMDRF------------------GVVKDTKAMNVLLDTLCK 1568
Query: 182 QRDLSSDELLGFVQEMKKLGFCFGMV-----DYTNVIRSLVKKEKVFDALGILNQMKSDG 236
+R S G QE++ G + + ++ K + +AL + +MK G
Sbjct: 1569 ER--SVKRARGVFQELR------GTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHG 1620
Query: 237 IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGI 296
P +V YT ++ +++D+ L DE+ P+V TY + ++ L K +
Sbjct: 1621 FSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREAL 1680
Query: 297 KMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
++E G PD YN+L+ L + L +V+EM+ GI N+ T++ +I
Sbjct: 1681 DTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAA 1740
Query: 357 ASKGDIIEACGLL----EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
A LL E++ N + T + + +C C+R V+ L L+ M KD+
Sbjct: 1741 CDHSQAENALKLLVKMEEQSCNPDIKTYTPLL--KLC--CKRQWVKILLFLVCHMFRKDI 1796
Query: 413 SP 414
SP
Sbjct: 1797 SP 1798
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 7/226 (3%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDAL-GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G+C D +++ ++ K K FD + G++NQM G ++ T V+ + + +
Sbjct: 1481 GYCH-CADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTE 1539
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK--PDVITYNTL 317
A + F ++ G+V D NV ++ LCK+ +V+ + +EL PD ++NTL
Sbjct: 1540 AIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVK---RARGVFQELRGTIPPDENSFNTL 1596
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ CK R L + ++EMK G ++ TY+ +++ + D LL+E +
Sbjct: 1597 VHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRC 1656
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + L + G R+AL+ ++ + V+P A + +L+
Sbjct: 1657 PPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLI 1702
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 275 DVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV 334
D Y V I G KQ ++ G +I M E+G ++T +++ L +
Sbjct: 1487 DSYDLMVDILGKFKQFDLMWG--LINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAF 1544
Query: 335 KEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQR 394
+M G+V + + ++++D L + + A G+ +E L + + F+ + G C+
Sbjct: 1545 HKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQE-LRGTIPPDENSFNTLVHGWCKA 1603
Query: 395 GLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNTPC 449
++++AL+ +++M SP + +L+ + + DF + L+D++ C
Sbjct: 1604 RMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDF--QTVYALLDEMRKRRC 1656
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,823,856,568
Number of Sequences: 23463169
Number of extensions: 278116272
Number of successful extensions: 927037
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5933
Number of HSP's successfully gapped in prelim test: 3709
Number of HSP's that attempted gapping in prelim test: 825984
Number of HSP's gapped (non-prelim): 53544
length of query: 453
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 307
effective length of database: 8,933,572,693
effective search space: 2742606816751
effective search space used: 2742606816751
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)