BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039177
(453 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L6Y7|PP193_ARATH Pentatricopeptide repeat-containing protein At2g38420,
mitochondrial OS=Arabidopsis thaliana GN=At2g38420 PE=2
SV=2
Length = 453
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/460 (40%), Positives = 276/460 (60%), Gaps = 61/460 (13%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
M RSS+ R + +RK+RK P S +K KW++ L Q+ A + ++ +L T +
Sbjct: 1 MARSSSWHRMSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELRSNLLTDS--------EN 52
Query: 61 PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120
++ +LL SF ++NCEP P+AY FVIKTLA++SQ +ISSVL H+E E F+TPE IF
Sbjct: 53 ASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFR 112
Query: 121 DLIKTYADAHRFQDSVNLFYKIPKFR---------------------------------- 146
D+I Y + R ++++ +F+KIP FR
Sbjct: 113 DVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACR 172
Query: 147 -------------------INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
I V A E++ M D VD + S +LSSVC+ +D S
Sbjct: 173 MGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSC 232
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
+++G++++++K F G+ DYT V+R LV+ + + + +LNQMK D ++PD+VCYT+V
Sbjct: 233 FDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIV 292
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
L GVI EDY KA++LFDELL+LGL PDVYTYNVYINGLCKQN++E +KM++ M +LGS
Sbjct: 293 LQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGS 352
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+V+TYN L++AL K +L+R + L KEM+ G+ N T+ IMI +++ A G
Sbjct: 353 EPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHG 412
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
LLEEA N + +SS +E I LC++GL+ +A+ELL +
Sbjct: 413 LLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 144/281 (51%), Gaps = 21/281 (7%)
Query: 163 DGFCVDG--KTCSLILSSVCEQRDLSSDELL------GFVQ--EMKKLG------FCFGM 206
DGFC G + S + RD++ D L GF Q +M + G FC G+
Sbjct: 359 DGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 207 ----VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V +T +I K + DA + N M G P++V YT +++G+ + D A E
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
L E+ +GL P+++TYN +NGLCK N+E +K++ E G D +TY TL+ A C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K E+++ +E++KEM KG+ + T++++++G G + + LL L KG+ ++
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F+ + C R ++ A + K M + V P + +E L+
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 154/331 (46%), Gaps = 33/331 (9%)
Query: 94 SQFCDISSVLD-----HIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRIN 148
S FC I +++ H + E F +LI Y A +D+ FR++
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA---------FRVH 444
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL-SSDELLGFVQEMKKLGFCFGMV 207
N MI G + T + ++ +C++ DL S++ELL EM K+G +
Sbjct: 445 ---------NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL---HEMWKIGLQPNIF 492
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +++ L K + +A+ ++ + ++ G+ D V YT +++ + KA+E+ E+
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
L GL P + T+NV +NG C +E G K++ M G P+ T+N+L++ C L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ K+M +G+ + +TY ++ G ++ EA L +E KG S +
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 388 ICGLCQRGLVRKALELLKQM------ADKDV 412
I G +R +A E+ QM ADK++
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 145/313 (46%), Gaps = 6/313 (1%)
Query: 114 TPEFI-FIDL-IKTYADAHRFQDSVNLFYKI-PKFRINRVGFAIEILNCMINDGFCVDGK 170
T F+ F DL + TY D ++F+++ F + R A + M+N G +
Sbjct: 154 TDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLRE--ARRVFEKMLNYGLVLSVD 211
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
+C++ L+ + + ++ ++ F +E ++G C+ + Y VI + + ++ +A +L
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVF-REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M+ G PD++ Y+ V+NG + K +L + + GL P+ Y Y I LC+
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + + M G PD + Y TL+ CK ++ + EM + I ++ TY+
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I G GD++EA L E KGL S F E I G C+ G ++ A + M
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 411 DVSPGARVWEALL 423
SP + L+
Sbjct: 451 GCSPNVVTYTTLI 463
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 134/279 (48%), Gaps = 4/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ R+ A +L M G+ D + S +++ C +L D++ ++ MK+ G
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL--DKVWKLIEVMKRKGLKPN 315
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y ++I L + K+ +A ++M GI PD V YT +++G + D A + F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNN-VEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ + PDV TY I+G C+ + VEAG K+ M G +PD +T+ L+ CK
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ + M G N+ TY+ +IDGL +GD+ A LL E GL +
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + GLC+ G + +A++L+ + ++ + L+
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 184/421 (43%), Gaps = 39/421 (9%)
Query: 1 MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60
M + +++A L P + ++ ++NV+Q +++ I
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 61 PHILSSLLHSF-------SIYN---------CEPPPEAYHFVIKTLAENSQFCDISSVLD 104
P+ +++ YN C P Y +IKT +NS+F D VL
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 105 HIEKRENFETPE-FIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMIND 163
E +E P+ F + LI + A R ++ + F +E M+ +
Sbjct: 477 --EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS--------------FLVE----MVEN 516
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + T +S E + +S + +V+EM++ G V T +I KK KV
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASAD--KYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
+A M GI D YT+++NG+ + AEE+F E+ G+ PDV++Y V I
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
NG K N++ + M E G P+VI YN LL C+ E+ + +EL+ EM KG+
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
N TY +IDG GD+ EA L +E KGL S ++ + G C+ V +A+ +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 404 L 404
Sbjct: 755 F 755
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T ++ +C DL D V+EM G +V YT +I++ ++ + DA+ +L
Sbjct: 419 TYGTVVKGMCSSGDL--DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+MK GI PDI CY ++ G+ + +A E++ GL P+ +TY +I+G + +
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 291 NVEAGIKMIACMEELGSKP-----------------------------------DVITYN 315
+ K + M E G P D TY
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
L+ L K +++ E+ +EM+ KGI ++ +Y ++I+G + G++ +A + +E + +
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
GL +++ + G C+ G + KA ELL +M+ K + P A +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 140/306 (45%), Gaps = 20/306 (6%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
I+ LIKT+ RF D++ + ++ + G A +I FC + SLI+
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKE-----QGIAPDI--------FCYN----SLIIG 496
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+R DE F+ EM + G Y I ++ + A + +M+ G+
Sbjct: 497 LSKAKR---MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P+ V T ++N + ++A + ++ G++ D TY V +NGL K + V+ +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M G PDV +Y L+ K+ + + + EM +G+ N+ Y++++ G
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G+I +A LL+E KGL + + I G C+ G + +A L +M K + P +
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 418 VWEALL 423
V+ L+
Sbjct: 734 VYTTLV 739
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 128/305 (41%), Gaps = 40/305 (13%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ ++V A EI M G D + ++++ + ++ EM + G
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS--SIFDEMVEEGLTP 660
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++ Y ++ + ++ A +L++M G+ P+ V Y +++G D +A LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIA-----CMEELG------------- 306
DE+ + GLVPD + Y ++G C+ N+VE I + C
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 307 --------------------SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
KP+ +TYN ++ LCK L +EL +M+ ++ +
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +++G G E + +EA+ G+ M+ I + G+ KAL L+ Q
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Query: 407 MADKD 411
M K+
Sbjct: 901 MFAKN 905
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 147/322 (45%), Gaps = 21/322 (6%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD--LSSDELLGFVQE------ 196
R NR+ ++ M+ D KT +++ + C + L D L +E
Sbjct: 197 LRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL 256
Query: 197 -------MKKLGFCFGMV----DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
+K+ C G+V Y +I L K +++ DA +L +M S G+ D Y+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++++G++ + A+ L E++ G+ Y Y+ I + K+ +E + M
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G P Y +L++ C+ + + + EL+ EMK + IV++ TY ++ G+ S GD+ A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL-- 423
+++E + G ++ I Q A+ +LK+M ++ ++P + +L+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 424 LSSVSKLDFVNTSFIRLVDQIL 445
LS ++D + + +V+ L
Sbjct: 497 LSKAKRMDEARSFLVEMVENGL 518
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I R+ A +L M + G +D T SL++ + + R+ +D G V EM G
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN--ADAAKGLVHEMVSHGINIK 346
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
Y I + K+ + A + + M + G+ P Y ++ G +++ + EL
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +V YTY + G+C +++ ++ M G +P+V+ Y TL++ +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++KEMK +GI ++ Y+ +I GL+ + EA L E + GL + +
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSP 414
I G + A + +K+M + V P
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLP 555
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 116/299 (38%), Gaps = 47/299 (15%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A I + M+ +G + +++L C ++ + ELL EM G V Y
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL---DEMSVKGLHPNAVTYCT 702
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF------- 264
+I K + +A + ++MK G+ PD YT +++G D +A +F
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 265 -----------DELLVLGLV--------------------PDVYTYNVYINGLCKQNNVE 293
+ + G P+ TYN+ I+ LCK+ N+E
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
A ++ M+ P VITY +LL K+ + + E GI + YS++I
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC-----GLCQRGLVRKALELLKQM 407
+ +G +A L+++ K + C G + G + A ++++ M
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 56/244 (22%)
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G D V + ++ +G I + +A +F + L LVP + V ++ L + N ++
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELV--------------------- 334
+ M E DV TY+ L+ A C+ + ++++
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 335 KEMKWKGIV-----------------------------------LNLQTYSIMIDGLASK 359
+ M KG+V L+ TYS++IDGL
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
+ A GL+ E ++ G+ + M+D IC + + G++ KA L M + P A+ +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 420 EALL 423
+L+
Sbjct: 386 ASLI 389
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 166/324 (51%), Gaps = 5/324 (1%)
Query: 100 SSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNC 159
++++D K+ E + +F ++ K A+ +V L + K + + GF E+
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV-LINGLFKNGVKKQGF--EMYEK 258
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M DG + T + +++ +C +D + + EM++ G +V Y +I L ++
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLC--KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A +++QMKSDGI P+++ Y +++G KA L +L GL P + TY
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N+ ++G C++ + KM+ MEE G KP +TY L+ + + + +L M+
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G+V ++ TYS++I G KG + EA L + + K +++ I G C+ G +
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL+LLK+M +K+++P + ++
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMI 520
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 175/374 (46%), Gaps = 57/374 (15%)
Query: 93 NSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGF 152
+SQF SS+L ++ + E +T ++ +I +Y + S+NL
Sbjct: 71 HSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQ----SLNL-------------- 112
Query: 153 AIEILNCMINDGFCVDGKTC-----------------------------------SLILS 177
+I N M+++GF V G C +++
Sbjct: 113 SISYFNEMVDNGF-VPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIK 171
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
CE ++ ++ + E+ + GF +V YT +I KK ++ A + +M G+
Sbjct: 172 GCCEAGEI--EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL 229
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+ YT+++NG+ + E+++++ G+ P++YTYN +N LCK + +
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M E G +++TYNTL+ LC+ +LN ++V +MK GI NL TY+ +IDG
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
G + +A L + ++GL ++ + G C++G A +++K+M ++ + P ++
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP-SK 408
Query: 418 VWEALLLSSVSKLD 431
V +L+ + ++ D
Sbjct: 409 VTYTILIDTFARSD 422
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 115/231 (49%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
++M++ G + Y V+ L K + DA + ++M+ G+ +IV Y ++ G+ +
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+A ++ D++ G+ P++ TYN I+G C + + + ++ G P ++TY
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N L+ C+ + + ++VKEM+ +GI + TY+I+ID A ++ +A L
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
GL + I G C +G + +A L K M +K+ P ++ ++L
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 130/272 (47%), Gaps = 9/272 (3%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++S + +S LL ++ E + F + Y +I S V+ + + ++ N+M
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSKTKFRL--YEVIINSYVQSQSLNLSISYFNEMVD 122
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+G P C+ +L V+ + + F+E +V DVY++ + I G C+ +E
Sbjct: 123 NGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEK 181
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ + E G P+V+ Y TL+ CK E+ + ++L EM G+V N +TY+++I+
Sbjct: 182 SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL G + + E+ G+ ++ + LC+ G + A ++ +M ++ VS
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 415 GARVWEALL--LSSVSKLDFVNTSFIRLVDQI 444
+ L+ L KL+ N ++VDQ+
Sbjct: 302 NIVTYNTLIGGLCREMKLNEAN----KVVDQM 329
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 147 INRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
+ ++G A+ + + + G T ++++S C + D S + V+EM++ G
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM--VKEMEERGIKPSK 408
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I + + + + A+ + M+ G+ PD+ Y+++++G ++ +A LF
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 267 L--------------LVLG---------------------LVPDVYTYNVYINGLCKQNN 291
+ ++LG L P+V +Y I LCK+
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 292 VEAGIKMIACMEELGSKPDV 311
+ +++ M + G P
Sbjct: 529 SKEAERLVEKMIDSGIDPST 548
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 181/377 (48%), Gaps = 29/377 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + C P E ++ VI L + + + + +++ + R F + + L+
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFAPDDITYGYLMNGL 332
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK------------TCSL 174
R + +LFY+IPK I I N +I+ GF G+ T
Sbjct: 333 CKIGRVDAAKDLFYRIPKPEI-------VIFNTLIH-GFVTHGRLDDAKAVLSDMVTSYG 384
Query: 175 ILSSVCEQRDL----SSDELLGF----VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
I+ VC L + L+G + +M+ G + YT ++ K K+ +A
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
+LN+M +DG+KP+ V + +++ + +A E+F E+ G PDVYT+N I+GL
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C+ + ++ + ++ M G + +TYNTL+ A + E+ R+LV EM ++G L+
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +I GL G++ +A L E+ L G + + I GLC+ G+V +A+E K+
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 407 MADKDVSPGARVWEALL 423
M + +P + +L+
Sbjct: 625 MVLRGSTPDIVTFNSLI 641
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 187/429 (43%), Gaps = 81/429 (18%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENS-----------------------------QFC 97
+L ++Y+CEP ++Y+ V++ L + FC
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 98 ---DISSVLDHIE--KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK------IPKF- 145
+I S L + + I+ LI + + +R +++ L + +P
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 146 ----------RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCE--QRDLSSDELL-- 191
+ +R+ A +++N M+ GF D T +++ +C+ + D + D
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 192 -------------GFVQE---------MKKLGFCFGMV----DYTNVIRSLVKKEKVFDA 225
GFV + + +G+V Y ++I K+ V A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
L +L+ M++ G KP++ YT++++G +A + +E+ GL P+ +N I+
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
CK++ + +++ M G KPDV T+N+L+ LC+V E+ L+++M +G+V N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
TY+ +I+ +G+I EA L+ E + +G ++ I GLC+ G V KA L +
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 406 QMADKDVSP 414
+M +P
Sbjct: 589 KMLRDGHAP 597
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 140/297 (47%), Gaps = 7/297 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ ++ A +LN M DG + + ++S+ C++ + E + +EM + G
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP--EAVEIFREMPRKGCKPD 493
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ + ++I L + +++ AL +L M S+G+ + V Y ++N + + + +A +L +
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G D TYN I GLC+ V+ + M G P I+ N L+ LC+
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ E KEM +G ++ T++ +I+GL G I + + + +G+ + F+
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS-----SVSKLDFVNTSF 437
+ LC+ G V A LL + + P R W LL S ++ + F N +F
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYNAAF 730
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 178/416 (42%), Gaps = 58/416 (13%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFY 140
+ Y +I L N +F I +L + K E E +FI +++ Y A + L
Sbjct: 112 DVYQVLIGKLGANGEFKTIDRLLIQM-KDEGIVFKESLFISIMRDYDKAGFPGQTTRLML 170
Query: 141 KI-------PKFRINRVGFAIEIL---NC----------MINDGFCVDGKTCSLILSSVC 180
++ P F+ V +EIL NC M++ T +++ + C
Sbjct: 171 EMRNVYSCEPTFKSYNV--VLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 181 EQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD 240
++ D L +++M K G V Y +I SL K +V +AL +L +M G PD
Sbjct: 229 AVNEI--DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 241 IVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI- 299
+ V+ G+ + +A ++ + +L+ G PD TY +NGLCK V+A +
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY 346
Query: 300 ---------------------------ACMEEL----GSKPDVITYNTLLQALCKVRELN 328
A + ++ G PDV TYN+L+ K +
Sbjct: 347 RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
E++ +M+ KG N+ +Y+I++DG G I EA +L E GL + F+ I
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQI 444
C+ + +A+E+ ++M K P + + L+S + ++D + + L D I
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS-LISGLCEVDEIKHALWLLRDMI 521
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 148/273 (54%), Gaps = 4/273 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S+++ S+C +D S D+ L EM+ G +V Y+++I L K D +L +M
Sbjct: 249 SIVIDSLC--KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I PD+V ++ +++ + + ++A+EL++E++ G+ PD TYN I+G CK+N +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+M M G +PD++TY+ L+ + CK + ++ L +E+ KG++ N TY+ +
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
+ G G + A L +E +++G+ + + GLC G + KALE+ ++M +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 413 SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
+ G ++ ++ + + SK+D + F L D+
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 138/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + N M G D T S ++ +C D D+ ++EM +V ++ +
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCN--DGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I VK+ K+ +A + N+M + GI PD + Y +++G + +A ++FD ++ G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD+ TY++ IN CK V+ G+++ + G P+ ITYNTL+ C+ +LN +E
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L +EM +G+ ++ TY I++DGL G++ +A + E+ + +++ I G+C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
V A L ++DK V P + ++
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+ +++ M+ GF D T +L+ +C+ + S L ++M++ +V
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN--SALALDLFRKMEERNIKASVV 246
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ VI SL K DAL + N+M+ GIK D+V Y+ ++ G+ + ++ E+
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ ++PDV T++ I+ K+ + ++ M G PD ITYN+L+ CK L
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++ M KG ++ TYSI+I+ + + L E +KGL + ++
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G CQ G + A EL ++M + V P + LL
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +LGF + M+ G M T +I +K+K+ A +L + G +PD + ++ +
Sbjct: 87 DLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTL 146
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG ++ +A L D ++ + PD+ T + INGLC + V + +I M E G
Sbjct: 147 VNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF 206
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD +TY +L LCK +L ++M+ + I ++ YSI+ID L G +A
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E KG+ + I GLC G ++L++M +++ P + AL+
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 164/369 (44%), Gaps = 24/369 (6%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y +P Y V+ L ++ + +E+R N + + +I + F
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFD 262
Query: 134 DSVNLF--YKIPKFRINRVGFAIEILNCMINDGFCVDGKT-----------------CSL 174
D+++LF ++ + + V ++ ++ + NDG DG +L
Sbjct: 263 DALSLFNEMEMKGIKADVVTYS-SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I V E + L + EL EM G + Y ++I K+ + +A + + M S
Sbjct: 322 IDVFVKEGKLLEAKELY---NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +PDIV Y++++N + LF E+ GL+P+ TYN + G C+ + A
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
++ M G P V+TY LL LC ELN+ E+ ++M+ + L + Y+I+I
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G+ + + +A L +KG+ ++ I GLC++G + +A L ++M + +P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 415 GARVWEALL 423
+ L+
Sbjct: 559 DDFTYNILI 567
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 138/280 (49%), Gaps = 2/280 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ FA +L G+ D T S +++ C + +S E + V M ++
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS--EAVALVDRMVEMKQRPD 174
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + +I L K +V +AL ++++M G +PD V Y VLN + + A +LF
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + V Y++ I+ LCK + + + + ME G K DV+TY++L+ LC
Sbjct: 235 KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + ++++EM + I+ ++ T+S +ID +G ++EA L E + +G+ + ++
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYN 354
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
I G C+ + +A ++ M K P + L+ S
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 124/252 (49%), Gaps = 2/252 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ + M++ G D T S++++S C+ + + D+ + +E+ G + Y +
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV--DDGMRLFREISSKGLIPNTITYNTL 426
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K+ A + +M S G+ P +V Y ++L+G+ + KA E+F+++ +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+ YN+ I+G+C + V+ + + + G KPDV+TYN ++ LCK L+
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++MK G + TY+I+I +I + L+EE G SS I L
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Query: 393 QRGLVRKALELL 404
R L + L++L
Sbjct: 607 DRRLDKSFLDML 618
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 147/298 (49%), Gaps = 7/298 (2%)
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
+ D + F VN K V AIEI++ M+ +G+ D T + ++S +C+ ++
Sbjct: 292 FPDQYTFNTLVNGLCKA-----GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
E + + +M V Y +I +L K+ +V +A + + S GI PD+ +
Sbjct: 347 K--EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G+ + ++ A ELF+E+ G PD +TYN+ I+ LC + ++ + M+ ME
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G VITYNTL+ CK + E+ EM+ G+ N TY+ +IDGL + +A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L+++ + +G ++ + C+ G ++KA ++++ M P + L+
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 151/320 (47%), Gaps = 20/320 (6%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDG 164
LIK AH+ + ++ + +P + + + A+ I M+ G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK-KLGFCFGMVDYTNVIRSLVKKEKVF 223
+ ++I+ C++ + ++ L F+QEM + GF + ++ L K V
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRV--EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
A+ I++ M +G PD+ Y V++G+ + +A E+ D+++ P+ TYN I
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+ LCK+N VE ++ + G PDV T+N+L+Q LC R EL +EM+ KG
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 344 LNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALEL 403
+ TY+++ID L SKG + EA +L++ G ++ I G C+ R+A E+
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 404 LKQMADKDVSPGARVWEALL 423
+M VS + + L+
Sbjct: 493 FDEMEVHGVSRNSVTYNTLI 512
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 132/267 (49%), Gaps = 2/267 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N+V A E+ + + G D T + ++ +C R+ + +EM+ G
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN--HRVAMELFEEMRSKGCEPDEF 436
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I SL K K+ +AL +L QM+ G ++ Y +++G +AEE+FDE+
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
V G+ + TYN I+GLCK VE +++ M G KPD TYN+LL C+ ++
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++V+ M G ++ TY +I GL G + A LL KG+ ++
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSP 414
I GL ++ +A+ L ++M +++ +P
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 167/382 (43%), Gaps = 32/382 (8%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
N P P Y ++ L + F D+ +L+ + K E F+ LI++YA QD
Sbjct: 78 NFSPEPALYEEILLRLGRSGSFDDMKKILEDM-KSSRCEMGTSTFLILIESYAQ-FELQD 135
Query: 135 SVNLFYKIPKFRINRVG------FAIEILNCMIND----------------GFCVDGKTC 172
+ + + I+ G F +LN +++ G D T
Sbjct: 136 EI---LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTF 192
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ ++C L L+ +++M G +T V++ +++ + AL I QM
Sbjct: 193 NVLIKALCRAHQLRPAILM--LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL-GLVPDVYTYNVYINGLCKQNN 291
G V ++++G + A E+ G PD YT+N +NGLCK +
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 292 VEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI 351
V+ I+++ M + G PDV TYN+++ LCK+ E+ E++ +M + N TY+
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 352 MIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKD 411
+I L + + EA L +KG+ F+ I GLC R A+EL ++M K
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 412 VSPGARVWEALL--LSSVSKLD 431
P + L+ L S KLD
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLD 452
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 110/283 (38%), Gaps = 61/283 (21%)
Query: 113 ETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC 172
E EF + LI + + +++N+ + + ++ ++ N +I DGFC KT
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNM---LKQMELSGCARSVITYNTLI-DGFCKANKT- 486
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++E+ EM+ G V Y +I L K +V DA +++QM
Sbjct: 487 ------------REAEEIF---DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
+G KPD Y +L D KA ++ + G PD+ TY I+GLCK V
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 293 EAGIKMIACMEELG------------------------------------SKPDVITYNT 316
E K++ ++ G + PD ++Y
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 317 LLQALCKVRELNRLRELVK---EMKWKGIVLNLQTYSIMIDGL 356
+ + LC +RE V E+ KG V + ++ +GL
Sbjct: 652 VFRGLCNGG--GPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A +I+ M ++G D T ++S +C+ R + +LL +Q MK G Y
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ-MK--GINLTPHAYNP 615
Query: 212 VIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLV 269
VI+ L +K K +A+ + +M + + PD V Y +V G+ ++ A + ELL
Sbjct: 616 VIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
G VP+ + + GL + E +K++
Sbjct: 676 KGFVPEFSSLYMLAEGLLTLSMEETLVKLV 705
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 173/360 (48%), Gaps = 25/360 (6%)
Query: 86 VIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK-IPK 144
+I++ A + F + +L I + EN E FI + + Y AH +V+LF++ + +
Sbjct: 83 MIESYANSGDFDSVEKLLSRI-RLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDE 141
Query: 145 FRINR-VGFAIEILNCMINDGF--------------------CVDGKTCSLILSSVCEQR 183
FR R V +LN +IN+G +G + +L++ ++C+ R
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLR 201
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+ D + + M + Y ++ L K+E++ +A+ +L++M+S+G P V
Sbjct: 202 FV--DRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y ++++G+ + D + +L D + + G VP+ TYN I+GLC + ++ + ++ M
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
P+ +TY TL+ L K R L+ M+ +G LN YS++I GL +G
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EA L + KG ++ + GLC+ G +A E+L +M P A + +L+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 4/285 (1%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
R+ A+ +L+ M ++G ++++ +C++ DL+ + V M G V
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLT--RVTKLVDNMFLKGCVPNEVT 294
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K+ A+ +L +M S P+ V Y ++NG++ Q A L +
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G + + Y+V I+GL K+ E + + M E G KP+++ Y+ L+ LC+ + N
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+E++ M G + N TYS ++ G G EA + +E G + I
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
GLC G V++A+ + +M + P + +++ L + +D
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/430 (20%), Positives = 181/430 (42%), Gaps = 81/430 (18%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL C P P Y+ +I L + ++ ++D++ + E + LI
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN-EVTYNTLIHGL 302
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
+ +V+L ++ + C+ ND T +++ + +QR
Sbjct: 303 CLKGKLDKAVSLLERMVSSK------------CIPND------VTYGTLINGLVKQR--R 342
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ + + + M++ G+ Y+ +I L K+ K +A+ + +M G KP+IV Y++
Sbjct: 343 ATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV 402
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYT---------------------------- 278
+++G+ + +A+E+ + ++ G +P+ YT
Sbjct: 403 LVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Query: 279 -------YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
Y+V I+GLC V+ + + + M +G KPD + Y+++++ LC + ++
Sbjct: 463 CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAAL 522
Query: 332 ELVKEM---KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL----------- 377
+L EM + ++ TY+I++DGL + DI A LL L++G
Sbjct: 523 KLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582
Query: 378 ---------CTQS-SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
C + S +E + L +R V A +++ M K ++P W A+++ +
Sbjct: 583 NTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTW-AMIVREI 641
Query: 428 SKLDFVNTSF 437
K +N +
Sbjct: 642 CKPKKINAAI 651
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 157/363 (43%), Gaps = 49/363 (13%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SLL C P Y +I L + + D +L +E+R + + I+ LI
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER-GYHLNQHIYSVLISG 371
Query: 126 YADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDGFCVD 168
+ +++++L+ K+ + R + A EILN MI G +
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 169 GKTCSLIL-----SSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
T S ++ + +CE E + +EM K G Y+ +I L +V
Sbjct: 432 AYTYSSLMKGFFKTGLCE-------EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL---GLVPDVYTYN 280
+A+ + ++M + GIKPD V Y+ ++ G+ A +L+ E+L PDV TYN
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 281 VYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC-KVRELNRLRELVKEMKW 339
+ ++GLC Q ++ + ++ M + G PDVIT NT L L K ++ R ++E+
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ L + + AC ++E L K L ++S + + +C+ +
Sbjct: 605 R---------------LLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINA 649
Query: 400 ALE 402
A++
Sbjct: 650 AID 652
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 146/292 (50%), Gaps = 4/292 (1%)
Query: 138 LFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM 197
L + + KFR G A+E+ N M++ G D + ++ S+CE +DLS + + + M
Sbjct: 198 LLHGLVKFR--HFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM--IAHM 253
Query: 198 KKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDY 257
+ G +V Y +I L KK+KV++A+GI + +KPD+V Y ++ G+ +++
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 258 VKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTL 317
E+ DE+L L P + + GL K+ +E + ++ + + G P++ YN L
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 318 LQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGL 377
+ +LCK R+ + L M G+ N TYSI+ID +G + A L E ++ GL
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 378 CTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
++ I G C+ G + A + +M +K + P + +L+ SK
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 26/299 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSL 174
F++ LI + +F ++ LF ++ K R N V ++I I D FC GK
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI------DMFCRRGKL--- 418
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
D L F+ EM G + Y ++I K + A G + +M +
Sbjct: 419 -------------DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
++P +V YT ++ G + KA L+ E+ G+ P +YT+ ++GL + +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+K+ M E KP+ +TYN +++ C+ ++++ E +KEM KGIV + +Y +I
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSM-FDETICGLCQRGLVRKALELLKQMADKDV 412
GL G EA + + L+KG C + + + + G C+ G + +AL + ++M + V
Sbjct: 586 GLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 10/267 (3%)
Query: 158 NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
NC +N+ C G +L C + L +E L QEM + G +V Y +I +
Sbjct: 607 NCELNE-ICYTG-----LLHGFCREGKL--EEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K + G+L +M G+KPD V YT +++ D+ +A ++D ++ G VP+
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR-ELNRLRELVKE 336
TY INGLCK V + + M+ + S P+ +TY L L K ++ + EL
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 337 MKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGL 396
+ KG++ N TY+++I G +G I EA L+ + G+ + I LC+R
Sbjct: 779 I-LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 397 VRKALELLKQMADKDVSPGARVWEALL 423
V+KA+EL M +K + P + L+
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 119/233 (51%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
L + EM L F ++++ L K+ K+ +AL ++ ++ G+ P++ Y +++
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + +AE LFD + +GL P+ TY++ I+ C++ ++ + + M + G K
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
V YN+L+ CK +++ + EM K + + TY+ ++ G SKG I +A L
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E KG+ F + GL + GL+R A++L +MA+ +V P + ++
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 126/266 (47%), Gaps = 2/266 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCE--QRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLV 217
M+++ C+ +SS+ E ++ +E L V+ + G + Y +I SL
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 218 KKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVY 277
K K +A + ++M G++P+ V Y+++++ + A E++ GL VY
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 278 TYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEM 337
YN ING CK ++ A +A M +P V+TY +L+ C ++N+ L EM
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
KGI ++ T++ ++ GL G I +A L E + ++ I G C+ G +
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 398 RKALELLKQMADKDVSPGARVWEALL 423
KA E LK+M +K + P + L+
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 112/215 (52%), Gaps = 1/215 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I+ V+ +V D + + M + + P++ + +L+G++ + A ELF++++ +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ PDVY Y I LC+ ++ +MIA ME G +++ YN L+ LCK +++
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ K++ K + ++ TY ++ GL + +++E L + + G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
L +RG + +AL L+K++ D VSP V+ AL+ S
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 6/240 (2%)
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+ ++ LVK A+ + N M S GI+PD+ YT V+ + +D +A+E+ +
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 270 LGLVPDVYTYNVYINGLCKQNNV--EAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G ++ YNV I+GLCK+ V GIK ++L KPDV+TY TL+ LCKV+E
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL--KPDVVTYCTLVYGLCKVQEF 313
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
E++ EM + S +++GL +G I EA L++ ++ G+ +++
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL--LLSSVSKLDFVNTSFIRLVDQIL 445
I LC+ +A L +M + P + L + KLD + +VD L
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A I + MIN+G + T + +++ +C+ ++ E+L +M+ + V Y
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL--CSKMQPVSSVPNQVTYGCF 758
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K E L+ G+ + Y M++ G Q +A EL ++ G+
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD TY IN LC++N+V+ I++ M E G +PD + YNTL+ C E+ + E
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 333 LVKEMKWKGIVLNLQT 348
L EM +G++ N +T
Sbjct: 879 LRNEMLRQGLIPNNKT 894
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 141/272 (51%), Gaps = 2/272 (0%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+ +LN M D + I+ S+C+ R + D+ L +EM+ G +V Y++
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV--DDALNLFKEMETKGIRPNVVTYSS 300
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L + DA +L+ M I P++V + +++ + + +V+AE+L+D+++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ PD++TYN +NG C + ++ +M M PDV+TYNTL++ CK + +
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL +EM +G+V + TY+ +I GL GD A + ++ ++ G+ + + GL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
C G + KALE+ M ++ ++ ++
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++++ C + +S L + +M KLG+ +V ++++ +++ DA+ +++
Sbjct: 122 TYNILINCFCRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G +PD + +T +++G+ + +A L D ++ G P++ TY V +NGLCK+
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + + ++ ME + DV+ +NT++ +LCK R ++ L KEM+ KGI N+ TYS
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I L S G +A LL + + K + F+ I + G +A +L M +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 411 DVSPGARVWEALL 423
+ P + +L+
Sbjct: 360 SIDPDIFTYNSLV 372
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ T S +L+ C + +S + + V +M ++G+
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS--DAVALVDQMVEMGYRPD 189
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I L K +A+ ++++M G +P++V Y +V+NG+ + D A L +
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV +N I+ LCK +V+ + + ME G +P+V+TY++L+ LC
Sbjct: 250 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +L+ +M K I NL T++ +ID +G +EA L ++ + + + ++
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G C + KA ++ + M KD P + L+
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 27/334 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D IEK+ N P + F LI + +F +
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNALIDAFVKEGKFVE 348
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ L+ + K I+ F N ++N GFC+ R + ++ F+
Sbjct: 349 AEKLYDDMIKRSIDPDIFT---YNSLVN-GFCM-------------HDRLDKAKQMFEFM 391
Query: 195 QEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
CF +V Y +I+ K ++V D + +M G+ D V YT ++ G+
Sbjct: 392 VSKD----CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D A+++F +++ G+ PD+ TY++ ++GLC +E +++ M++ K D+
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y T+++ +CK +++ +L + KG+ N+ TY+ MI GL SK + EA LL++
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G S ++ I + G + EL+++M
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 126/259 (48%), Gaps = 2/259 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ + + D ++ ++M++L G+ Y +I ++ ++ AL +L +M
Sbjct: 91 LLSAIAKMKKF--DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +P IV + +LNG + A L D+++ +G PD T+ I+GL N
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ M + G +P+++TY ++ LCK + + L+ +M+ I ++ ++ +ID
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + +A L +E KG+ + I LC G A +LL M +K ++P
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 415 GARVWEALLLSSVSKLDFV 433
+ AL+ + V + FV
Sbjct: 329 NLVTFNALIDAFVKEGKFV 347
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 9/252 (3%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
F G DY ++R+ + K+ DA+G+ M P IV + +L+ + + +
Sbjct: 45 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 104
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L +++ L +V +YTYN+ IN C+++ + + ++ M +LG +P ++T ++LL
Sbjct: 105 ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C + ++ LV +M G + T++ +I GL EA L++ + +G
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRL 440
+ + GLC+RG AL LL +M + ++ ++ S+ K R
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT-IIDSLCKY--------RH 275
Query: 441 VDQILNTPCKME 452
VD LN +ME
Sbjct: 276 VDDALNLFKEME 287
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
D+ D+ +G M K +V++ ++ ++ K +K + + +M+ I +
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y +++N + A L +++ LG P + T + +NG C + + ++ M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E+G +PD IT+ TL+ L + + LV M +G NL TY ++++GL +GD
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A LL + + +F+ I LC+ V AL L K+M K + P + +L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 423 L 423
+
Sbjct: 302 I 302
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 54/234 (23%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDG 164
LIK + + R +D LF ++ F A ++ M++DG
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D T S++L +C L ++ L M+K + YT +I + K KV D
Sbjct: 466 VPPDIMTYSILLDGLCNNGKL--EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ + G+KP++V TYN I+
Sbjct: 524 GWDLFCSLSLKGVKPNVV-----------------------------------TYNTMIS 548
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
GLC + ++ ++ M+E G P+ TYNTL++A + + EL++EM+
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 157/350 (44%), Gaps = 13/350 (3%)
Query: 81 EAYHFVIKTLAENSQFC-DISSVLDHIEKRENFETPEFIFID---LIKTYADAHRFQDSV 136
E V K+L E C SSV D + K ID I A AH F V
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVK----SYSRLSLIDKALSIVHLAQAHGFMPGV 169
Query: 137 NLFYKI--PKFRINR-VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+ + R R + FA + M+ + T ++++ C ++ D L
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI--DVALTL 227
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+M+ G +V Y +I K K+ D +L M G++P+++ Y +V+NG+
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ + + E+ G D TYN I G CK+ N + M A M G P VIT
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y +L+ ++CK +NR E + +M+ +G+ N +TY+ ++DG + KG + EA +L E
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G ++ I G C G + A+ +L+ M +K +SP + +L
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ V F +L M G+ +D T + ++ C++ + + L EM + G
Sbjct: 290 RMKEVSF---VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH--QALVMHAEMLRHGLTPS 344
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV-KAEELF 264
++ YT++I S+ K + A+ L+QM+ G+ P+ YT +++G Q+ Y+ +A +
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG-FSQKGYMNEAYRVL 403
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
E+ G P V TYN ING C +E I ++ M+E G PDV++Y+T+L C+
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+++ + +EM KGI + TYS +I G + EAC L EE L GL +
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I C G + KAL+L +M +K V P + L+
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 166/357 (46%), Gaps = 21/357 (5%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S ++ EP +Y+ VI L + ++S VL + +R + E + LIK Y
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR-GYSLDEVTYNTLIKGY 320
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
F ++ + + M+ G T + ++ S+C+ ++
Sbjct: 321 CKEGNFHQALVMHAE------------------MLRHGLTPSVITYTSLIHSMCKAGNM- 361
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ + F+ +M+ G C YT ++ +K + +A +L +M +G P +V Y
Sbjct: 362 -NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
++NG V A + +++ GL PDV +Y+ ++G C+ +V+ +++ M E G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KPD ITY++L+Q C+ R +L +EM G+ + TY+ +I+ +GD+ +A
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E + KG+ + I GL ++ R+A LL ++ ++ P + L+
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 117/215 (54%), Gaps = 1/215 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDELLVL 270
V++S + + AL I++ ++ G P ++ Y VL+ I + + AE +F E+L
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
+ P+V+TYN+ I G C N++ + + ME G P+V+TYNTL+ CK+R+++
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+L++ M KG+ NL +Y+++I+GL +G + E +L E +G ++ I G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
C+ G +AL + +M ++P + +L+ S
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 152/325 (46%), Gaps = 6/325 (1%)
Query: 100 SSVLDH-IEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILN 158
++VLD I + N E +F +++++ + F + N+ + F N + A+ + +
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVF--TYNILIRGFCFAGN-IDVALTLFD 229
Query: 159 CMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVK 218
M G + T + ++ C+ R + D+ ++ M G ++ Y VI L +
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKI--DDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 219 KEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYT 278
+ ++ + +L +M G D V Y ++ G + ++ +A + E+L GL P V T
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 279 YNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMK 338
Y I+ +CK N+ ++ + M G P+ TY TL+ + +N +++EM
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 339 WKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVR 398
G ++ TY+ +I+G G + +A +LE+ KGL + + G C+ V
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 399 KALELLKQMADKDVSPGARVWEALL 423
+AL + ++M +K + P + +L+
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLI 492
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 52/262 (19%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
AI +L M G D + S +LS C D+ DE L +EM + G + Y+++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV--DEALRVKREMVEKGIKPDTITYSSL 491
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I+ ++ + +A + +M G+ PD YT ++N ++ D KA +L +E++ G+
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 273 VPDVYTYNVYINGLCKQN--------------------------------NVE------- 293
+PDV TY+V INGL KQ+ N+E
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 294 -AGIKMIACMEE--------LGS--KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGI 342
G M M E LG KPD YN ++ C+ ++ + L KEM G
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Query: 343 VLNLQTYSIMIDGLASKGDIIE 364
+L+ T ++ L +G + E
Sbjct: 672 LLHTVTVIALVKALHKEGKVNE 693
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 6/268 (2%)
Query: 119 FIDLIKTYADAHR--FQDSVNLFYKIPKF--RINRVGFAIEILNCMINDGFCVDGKTCSL 174
++D K AD R F SV F + F R +G AI+IL M G + + +
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+L C+++ + D + +++ M G +V Y ++ +L K KV DA+ ILNQ+ S
Sbjct: 385 LLHGFCKEKKM--DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P ++ Y V++G+ KA +L DE+ L PD TY+ + GL ++ V+
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
IK E +G +P+ +T+N+++ LCK R+ +R + + M +G N +Y+I+I+
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSS 382
GLA +G EA LL E NKGL +SS
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 149/281 (53%), Gaps = 4/281 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+L+ M+ D T ++++ + C RD + + EM+ G +V Y +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATC--RDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ + K+ ++ +A+ LN M S G +P+++ + ++L + ++ AE+L ++L G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P V T+N+ IN LC++ + I ++ M + G +P+ ++YN LL CK ++++R E
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++ M +G ++ TY+ M+ L G + +A +L + +KG ++ I GL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLD 431
+ G KA++LL +M KD+ P + +L+ LS K+D
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 178/361 (49%), Gaps = 26/361 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
S+L S+ P Y+ ++++L ++ + VLD + +R+ + P+ I + LI+
Sbjct: 193 SVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY--PDVITYTILIE 247
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
R + VG A+++L+ M + G D T +++++ +C++
Sbjct: 248 ATC------------------RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L DE + F+ +M G ++ + ++RS+ + DA +L M G P +V +
Sbjct: 290 L--DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++N + + +A ++ +++ G P+ +YN ++G CK+ ++ I+ + M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD++TYNT+L ALCK ++ E++ ++ KG L TY+ +IDGLA G +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A LL+E K L + + + GL + G V +A++ + + P A + +++L
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 425 S 425
Sbjct: 528 G 528
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 141/280 (50%), Gaps = 5/280 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R+ + A +IL + G D T ++++S C+ + E+ + + ++
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK-----AGEINNALSVLDRMSVSPD 203
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y ++RSL K+ A+ +L++M PD++ YT+++ A +L D
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ G PDV TYNV +NG+CK+ ++ IK + M G +P+VIT+N +L+++C
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L+ +M KG ++ T++I+I+ L KG + A +LE+ G S ++
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ G C+ + +A+E L++M + P + +L +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 166/350 (47%), Gaps = 23/350 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
+C P Y +I+ +S +LD E R+ TP+ + +++
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLD--EMRDRGCTPDVVTYNVL----------- 280
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQ-RDLSSDELLGF 193
VN K R+ AI+ LN M + G + T ++IL S+C R + +++LL
Sbjct: 281 -VNGICKE-----GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA- 333
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+M + GF +V + +I L +K + A+ IL +M G +P+ + Y +L+G
Sbjct: 334 --DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
++ +A E + ++ G PD+ TYN + LCK VE ++++ + G P +IT
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNT++ L K + + +L+ EM+ K + + TYS ++ GL+ +G + EA E
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + F+ + GLC+ +A++ L M ++ P + L+
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
F V+ N +R +V+ ++ + L M G PDI+ T ++ G KA
Sbjct: 98 FALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAA 157
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
++ + L G VPDV TYNV I+G CK + ++ ++ + PDV+TYNT+L++L
Sbjct: 158 KILEILEGSGAVPDVITYNVMISGYCKAGEIN---NALSVLDRMSVSPDVVTYNTILRSL 214
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C +L + E++ M + ++ TY+I+I+ + A LL+E ++G
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVS 428
++ + G+C+ G + +A++ L M P +L S S
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+ +N GF VD +T + +L +CE L DE +E+ G V Y +
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL--DEAFRIQKEILGRGCVMDRVSYNTL 559
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I K+K+ +A L++M G+KPD Y++++ G+ +A + +D+ G+
Sbjct: 560 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 619
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+PDVYTY+V I+G CK E G + M +P+ + YN L++A C+ L+ E
Sbjct: 620 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 679
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L ++MK KGI N TY+ +I G++ + EA L EE +GL + I G
Sbjct: 680 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 739
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G + K LL++M K+V P + ++
Sbjct: 740 KLGQMVKVECLLREMHSKNVHPNKITYTVMI 770
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 134/281 (47%), Gaps = 5/281 (1%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSD-ELLGFVQEMKKLGF 202
+F+ + A+++ + N G TC+++L+S+ + E V + G
Sbjct: 214 QFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GV 269
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ +T I + K KV +A+ + ++M+ G+ P++V + V++G+ + Y +A
Sbjct: 270 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 329
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
++++ G+ P + TY++ + GL + + ++ M + G P+VI YN L+ +
Sbjct: 330 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 389
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ LN+ E+ M KG+ L TY+ +I G G A LL+E L+ G
Sbjct: 390 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 449
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
F IC LC + AL + +M +++SPG + L+
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 490
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 23/348 (6%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
EP Y ++K L + D VL + K+ F ++ +LI ++ +A
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFIEAGSLNK-- 396
Query: 137 NLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
AIEI + M++ G + T + ++ C+ + E L ++E
Sbjct: 397 ----------------AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL--LKE 438
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
M +GF +T+VI L+ +FD AL + +M + P T +++G+
Sbjct: 439 MLSIGFNVNQGSFTSVI-CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 497
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+ KA EL+ + L G V D T N ++GLC+ ++ ++ + G D ++YN
Sbjct: 498 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 557
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
TL+ C ++L+ + EM +G+ + TYSI+I GL + + EA ++
Sbjct: 558 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 617
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G+ + I G C+ + E +M K+V P V+ L+
Sbjct: 618 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 128/296 (43%), Gaps = 24/296 (8%)
Query: 117 FIFIDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSL 174
++F I + + +++V LF K+ + + N V F I DG + G+
Sbjct: 274 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVI------DGLGMCGRY--- 324
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
DE F ++M + G ++ Y+ +++ L + +++ DA +L +M
Sbjct: 325 -------------DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 371
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G P+++ Y +++ I KA E+ D ++ GL TYN I G CK +
Sbjct: 372 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 431
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+++ M +G + ++ +++ LC + V EM + + + +I
Sbjct: 432 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 491
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
GL G +A L + LNKG + + + GLC+ G + +A + K++ +
Sbjct: 492 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 547
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 166/350 (47%), Gaps = 21/350 (6%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
Y C+P Y V+ + ++ Q +L +E+R N + + +I
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLD 280
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
++ NLF ++ + + I N +I GFC G+ D+
Sbjct: 281 NAFNLFNEM---EMKGITTNIITYNILIG-GFCNAGRW----------------DDGAKL 320
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
+++M K +V ++ +I S VK+ K+ +A + +M GI PD + YT +++G
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ KA ++ D ++ G P++ T+N+ ING CK N ++ G+++ M G D +T
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNTL+Q C++ +LN +EL +EM + + N+ TY I++DGL G+ +A + E+
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ +++ I G+C V A +L + K V PG + + ++
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D +L ++M+ G + + +I + K+ A + ++ G +P+ + ++ +
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG+ ++ +A EL D ++ +G PD+ T N +NGLC + +I M E G
Sbjct: 165 INGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 224
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+ +TY +L +CK + EL+++M+ + I L+ YSI+IDGL G + A
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L E KG+ T ++ I G C G +LL+ M + ++P + L+ S V
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 428 SK 429
+
Sbjct: 345 KE 346
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 129/255 (50%), Gaps = 6/255 (2%)
Query: 171 TCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
T S++++ C R L L F + ++ KLG+ + ++ +I L + +V +AL +
Sbjct: 125 TLSIMINCFCRCRKLC----LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+++M G KPD++ ++NG+ + +A L D+++ G P+ TY +N +CK
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
++++ MEE K D + Y+ ++ LCK L+ L EM+ KGI N+ T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+I+I G + G + LL + + + + F I + G +R+A EL K+M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 409 DKDVSPGARVWEALL 423
+ ++P + +L+
Sbjct: 361 HRGIAPDTITYTSLI 375
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 145/298 (48%), Gaps = 4/298 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
RV A+E+++ M+ G D T + +++ +C + LL + +M + G V
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL--IDKMVEYGCQPNAV 229
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y V+ + K + A+ +L +M+ IK D V Y+++++G+ A LF+E+
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G+ ++ TYN+ I G C + G K++ M + P+V+T++ L+ + K +L
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL KEM +GI + TY+ +IDG + + +A +++ ++KG F+
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVDQ 443
I G C+ + LEL ++M+ + V + L+ + KL+ F +V +
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 125/257 (48%), Gaps = 2/257 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + A ++++ M++ G + +T +++++ C+ + D+ L ++M G V
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI--DDGLELFRKMSLRGVVADTV 439
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I+ + K+ A + +M S + P+IV Y ++L+G+ + KA E+F+++
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ D+ YN+ I+G+C + V+ + + G KP V TYN ++ LCK L
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ L ++M+ G + TY+I+I GD ++ L+EE G +S
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 388 ICGLCQRGLVRKALELL 404
I L L + L++L
Sbjct: 620 IDMLSDGRLKKSFLDML 636
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 112/231 (48%), Gaps = 1/231 (0%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y +RS + K DA+ + M P ++ ++ + + + + Y L +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ + G+ ++YT ++ IN C+ + + + +LG +P+ IT++TL+ LC
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ ELV M G +L T + +++GL G EA L+++ + G + +
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSF 437
+ +C+ G A+ELL++M ++++ A V ++++ + K ++ +F
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDA-VKYSIIIDGLCKHGSLDNAF 283
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 121/227 (53%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D+ + M+ F V Y +I SL + K+ AL +LNQ+ SD +P ++ YT++
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+ +++ +A +L DE+L GL PD++TYN I G+CK+ V+ +M+ +E G
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDVI+YN LL+AL + +L+ +M + N+ TYSI+I L G I EA
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
LL+ KGL + +D I C+ G + A+E L+ M P
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++NR+ A +L+ M + F D T ++++ S+C + L D L + ++
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL--DLALKVLNQLLSDNCQPT 227
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ YT +I + + + V +AL ++++M S G+KPD+ Y ++ G+ + +A E+
Sbjct: 228 VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L + G PDV +YN+ + L Q E G K++ M P+V+TY+ L+ LC+
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L+K MK KG+ + +Y +I +G + A LE ++ G ++
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ LC+ G +ALE+ ++ + SP + + +
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 174/406 (42%), Gaps = 61/406 (15%)
Query: 55 QQIPKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET 114
+ IPK ++ +L F +P AY+ +I + ++ D + VLD + ++ F
Sbjct: 138 RNIPKAVRVME-ILEKFG----QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD-FSP 191
Query: 115 PEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSL 174
+ +I + ++ A+++LN +++D T ++
Sbjct: 192 DTVTYNIMIGSLCSR------------------GKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ + + + DE L + EM G M Y +IR + K+ V A ++ ++
Sbjct: 234 LIEATMLEGGV--DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEEL----FDE------------------------ 266
G +PD++ Y ++L ++ Q + + E+L F E
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 267 ---LLVL----GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
LL L GL PD Y+Y+ I C++ ++ I+ + M G PD++ YNT+L
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
LCK + ++ E+ ++ G N +Y+ M L S GD I A ++ E ++ G+
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
++ I LC+ G+V +A ELL M + P + +LL
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 139/274 (50%), Gaps = 9/274 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD---Y 209
++ +L M+ G+ D C+ ++ R++ + + ++ ++K FG D Y
Sbjct: 108 SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIP--KAVRVMEILEK----FGQPDVFAY 161
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I K ++ DA +L++M+S PD V Y +++ + + A ++ ++LL
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
P V TY + I + V+ +K++ M G KPD+ TYNT+++ +CK ++R
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
E+V+ ++ KG ++ +Y+I++ L ++G E L+ + ++ + I
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ G + +A+ LLK M +K ++P A ++ L+
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T S++++++C RD +E + ++ MK+ G Y +I + ++ ++ A+ L
Sbjct: 335 TYSILITTLC--RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M SDG PDIV Y VL + +A E+F +L +G P+ +YN + L
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + MI M G PD ITYN+++ LC+ ++ EL+ +M+ ++ TY+
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ G I +A +LE + G + + I G+ G +A+EL +
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Query: 411 DV 412
D
Sbjct: 573 DA 574
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 36/203 (17%)
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+Y+++ L + ++ G PDV I G N+ ++++ +E+ G +PDV YN
Sbjct: 104 NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYN 162
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK---------------- 359
L+ CK+ ++ ++ M+ K + TY+IMI L S+
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 360 -------------------GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKA 400
G + EA L++E L++GL ++ I G+C+ G+V +A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 401 LELLKQMADKDVSPGARVWEALL 423
E+++ + K P + LL
Sbjct: 283 FEMVRNLELKGCEPDVISYNILL 305
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ ++ M+++G D T + ++S +C R+ DE + +M+ F +V Y V
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLC--REGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
+ K ++ DA+ +L M +G +P+ YT+++ G+ +A EL ++L+
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 23/371 (6%)
Query: 81 EAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF 139
+ YH ++ L+ F + S++ D + E +FIDL++ Y A R++ S+ +F
Sbjct: 84 DTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIF 143
Query: 140 YKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKK 199
+IP F + R ++ LN ++N + + L+ + F +
Sbjct: 144 LRIPDFGVKR---SVRSLNTLLN--VLIQNQRFDLVHAM--------------FKNSKES 184
Query: 200 LGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK 259
G + ++++L KK + A +L+++ S G+ P++V YT +L G + + D
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 260 AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQ 319
A+ + +E+L G PD TY V ++G CK ++ ME+ +P+ +TY +++
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 320 ALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCT 379
ALCK ++ R + EM + + + +ID L + EACGL + L
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 380 QSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIR 439
+++ I LC+ G V +A +L + +K P + L+ K + R
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAG--R 421
Query: 440 LVDQILNTPCK 450
L D + CK
Sbjct: 422 LWDDMYERKCK 432
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 141/279 (50%), Gaps = 5/279 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A+ ++N M+ G D + I+ S+C+ + + L +M+ G +V
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV--NYALSLFDQMENYGIRPDVV 213
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT+++ L + DA +L M IKPD++ + +++ + + ++ AEEL++E+
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + + P+++TY ING C + V+ +M ME G PDV+ Y +L+ CK +++
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ ++ EM KG+ N TY+ +I G G A + +++G+ ++
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 388 ICGLCQRGLVRKALELLKQMADKD---VSPGARVWEALL 423
+ LC G V+KAL + + M ++ V+P + LL
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 147/316 (46%), Gaps = 13/316 (4%)
Query: 132 FQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
F +N+ K+ KF + I + + + G D TC+L+++ C+ SS L
Sbjct: 75 FTKLLNVIAKMKKFDV-----VINLCDHLQIMGVSHDLYTCNLLMNCFCQ----SSQPYL 125
Query: 192 G--FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
F+ +M KLGF +V +T++I ++ +A+ ++NQM GIKPD+V YT +++
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
+ A LFD++ G+ PDV Y +NGLC ++ M + KP
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DVIT+N L+ A K + EL EM I N+ TY+ +I+G +G + EA +
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSV 427
KG + I G C+ V A+++ +M+ K ++ + L+ V
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 428 SKLDFVNTSFIRLVDQ 443
K + F +V +
Sbjct: 366 GKPNVAQEVFSHMVSR 381
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 164/353 (46%), Gaps = 28/353 (7%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIK 124
SL Y P Y ++ L + ++ D S+L + KR+ P+ I F LI
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK--IKPDVITFNALID 255
Query: 125 TYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ +F D+ L+ ++ + I F L IN GFC++G V E R
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL---IN-GFCMEG--------CVDEARQ 303
Query: 185 LSSDELLGFVQEMKKLGFCF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+ ++ E K CF +V YT++I K +KV DA+ I +M G+ + +
Sbjct: 304 MF------YLMETKG---CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
YT ++ G A+E+F ++ G+ P++ TYNV ++ LC V+ + + M+
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 304 EL---GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKG 360
+ G P++ TYN LL LC +L + + ++M+ + + + + TY+I+I G+ G
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG 474
Query: 361 DIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
+ A L +KG+ + I GL + GL +A L ++M + VS
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 4/235 (1%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
FC +Y ++R+ + + +AL + M P I+ +T +LN + + +
Sbjct: 36 AFC----NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVV 91
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L D L ++G+ D+YT N+ +N C+ + + M +LG +PD++T+ +L+
Sbjct: 92 INLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLING 151
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C + +V +M GI ++ Y+ +ID L G + A L ++ N G+
Sbjct: 152 FCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
M+ + GLC G R A LL+ M + + P + AL+ + V + F++
Sbjct: 212 VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++D+T ++ + K +K + + + ++ G+ D+ +++N A
Sbjct: 72 IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ LG PD+ T+ ING C N +E + M+ M E+G KPDV+ Y T++ +LCK
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N L +M+ GI ++ Y+ +++GL + G +A LL + + F+
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G A EL +M ++P + +L+
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 159/352 (45%), Gaps = 28/352 (7%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFET-PEFI-FIDLIKTYADAHRFQD 134
+P Y +I +L +N ++ L ++ EN+ P+ + + L+ ++ R++D
Sbjct: 174 KPDVVMYTTIIDSLCKNGH---VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ +L + K +I + N +I D F +GK L ++EL
Sbjct: 231 ADSLLRGMTKRKIKP---DVITFNALI-DAFVKEGKF-------------LDAEELY--- 270
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
EM ++ + YT++I + V +A + M++ G PD+V YT ++NG
Sbjct: 271 NEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ A ++F E+ GL + TY I G + ++ + M G P++ TY
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 315 NTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
N LL LC KV++ + E +++ + G+ N+ TY++++ GL G + +A + E+
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 372 ALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + + I G+C+ G V+ A+ L + K V P + ++
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 139/274 (50%), Gaps = 2/274 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
+ A +LN M D + I+ S+C+ R + D+ L +EM+ G +V Y
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV--DDALNLFKEMETKGIRPNVVTY 223
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+++I L + DA +L+ M I P++V + +++ + + +V+AE+L D+++
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD++TYN ING C + ++ +M M PD+ TYNTL++ CK + +
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL +EM +G+V + TY+ +I GL GD A + ++ ++ G+ + +
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC G + KALE+ M ++ ++ ++
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++++ C + +S L + +M KLG+ +V ++++ +++ DA+ +++
Sbjct: 47 TYNILINCFCRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 104
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G +PD + +T +++G+ + +A L D ++ G P++ TY V +NGLCK+
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+++ ++ ME + DV+ +NT++ +LCK R ++ L KEM+ KGI N+ TYS
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I L S G +A LL + + K + F+ I + G +A +L M +
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 411 DVSPGARVWEALL 423
+ P + +L+
Sbjct: 285 SIDPDIFTYNSLI 297
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ T S +L+ C + +S + + V +M ++G+
Sbjct: 57 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS--DAVALVDQMVEMGYRPD 114
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I L K +A+ ++++M G +P++V Y +V+NG+ + D A L +
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV +N I+ LCK +V+ + + ME G +P+V+TY++L+ LC
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +L+ +M K I NL T++ +ID +G +EA L ++ + + + ++
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + KA ++ + M KD P + L+
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 160/359 (44%), Gaps = 29/359 (8%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE--NFETPEFIFIDLIKTYADAHRF 132
C+P Y V+ L + DI + + K E E IF +I +
Sbjct: 145 GCQPNLVTYGVVVNGLCKRG---DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 133 QDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDEL 190
D++NLF ++ R N V ++ +++C+ + G D S +LS + E++
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYS-SLISCLCSYGRWSDA---SQLLSDMIEKK------- 250
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+V + +I + VK+ K +A + + M I PDI Y ++NG
Sbjct: 251 -----------INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ + KA+++F+ ++ PD+ TYN I G CK VE G ++ M G D
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
+TY TL+Q L + + +++ K+M G+ ++ TYSI++DGL + G + +A + +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ ++ I G+C+ G V +L ++ K V P + ++ SK
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 156/334 (46%), Gaps = 27/334 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D IEK+ N P + F LI + +F +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN---PNLVTFNALIDAFVKEGKFVE 273
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+ L + K I+ F N +IN GFC+ R + ++ F+
Sbjct: 274 AEKLHDDMIKRSIDPDIFT---YNSLIN-GFCM-------------HDRLDKAKQMFEFM 316
Query: 195 QEMKKLGFCFGMVD-YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
CF +D Y +I+ K ++V D + +M G+ D V YT ++ G+
Sbjct: 317 VSKD----CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
D A+++F +++ G+ PD+ TY++ ++GLC +E +++ M++ K D+
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
Y T+++ +CK +++ +L + KG+ N+ TY+ MI GL SK + EA LL++
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
G S ++ I + G + EL+++M
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 127/259 (49%), Gaps = 2/259 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ + + D ++ ++M++LG + Y +I ++ ++ AL +L +M
Sbjct: 16 LLSAIAKMKKF--DLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +P IV + +LNG + A L D+++ +G PD T+ I+GL N
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 133
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ M + G +P+++TY ++ LCK +++ L+ +M+ I ++ ++ +ID
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L + +A L +E KG+ + I LC G A +LL M +K ++P
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 415 GARVWEALLLSSVSKLDFV 433
+ AL+ + V + FV
Sbjct: 254 NLVTFNALIDAFVKEGKFV 272
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 211 NVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
N + S + K K FD + + +M+ GI ++ Y +++N + A L +++
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 73
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
LG P + T + +NG C + + ++ M E+G +PD IT+ TL+ L + +
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 133
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
LV M +G NL TY ++++GL +GDI A LL + + +F+ I
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ V AL L K+M K + P + +L+
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 9/214 (4%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P I + +L+ + + + L +++ LG+ ++YTYN+ IN C+++ + + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M +LG +P ++T ++LL C + ++ LV +M G + T++ +I GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
EA L++ + +G + + GLC+RG + A LL +M + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 419 WEALLLSSVSKLDFVNTSFIRLVDQILNTPCKME 452
+ ++ S+ K R VD LN +ME
Sbjct: 188 FNT-IIDSLCKY--------RHVDDALNLFKEME 212
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDG 164
LIK + + R +D LF ++ F A ++ M++DG
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D T S++L +C L ++ L M+K + YT +I + K KV D
Sbjct: 391 VPPDIMTYSILLDGLCNNGKL--EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ + G+KP++V Y +++G+ + +A L ++ G +PD TYN I
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Query: 285 GLCKQNNVEAGIKMIACMEE 304
+ + A ++I M
Sbjct: 509 AHLRDGDKAASAELIREMRS 528
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 65/142 (45%)
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
+P ++ +N ++ + K + I + M+ LG ++ TYN L+ C+ +++
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
L+ +M G ++ T S +++G I +A L+++ + G + F I GL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 393 QRGLVRKALELLKQMADKDVSP 414
+A+ L+ +M + P
Sbjct: 127 LHNKASEAVALVDRMVQRGCQP 148
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ D T S +L+ C + +S + + V +M ++G+
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS--DAVALVDQMVEMGYKPD 187
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+T +I L K +A+ +++QM G +PD+V Y V+NG+ + D A L +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + +V +N I+ LCK +VE + + ME G +P+V+TYN+L+ LC
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ M K I N+ T++ +ID +G ++EA L EE + + + + ++
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A ++ K M KD P + + L+
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 154/314 (49%), Gaps = 19/314 (6%)
Query: 127 ADAHRFQDSVNLFYKIPKFR-----------------INRVGFAIEILNCMINDGFCVDG 169
+D + D+V+LF + K R +N+ I + M G D
Sbjct: 59 SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T S+ ++ C + LS L + +M KLG+ +V ++++ +++ DA+ ++
Sbjct: 119 YTYSIFINCFCRRSQLSL--ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+QM G KPD +T +++G+ + +A L D+++ G PD+ TY +NGLCK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+++ + ++ ME K +V+ +NT++ +LCK R + +L EM+ KGI N+ TY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
+ +I+ L + G +A LL L K + F+ I + G + +A +L ++M
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 410 KDVSPGARVWEALL 423
+ + P + L+
Sbjct: 357 RSIDPDTITYNLLI 370
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I+ S+C+ R + + + EM+ G +V Y ++I L + DA +L+ M
Sbjct: 264 IIDSLCKYRHV--EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
I P++V + +++ + V+AE+L +E++ + PD TYN+ ING C N ++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+M M P++ TYNTL+ CK + + EL +EM +G+V N TY+ +I
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G GD A + ++ ++ + T + + GLC G + AL + K + ++
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 415 GARVWEALL 423
++ ++
Sbjct: 502 NIFIYNTMI 510
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 173/392 (44%), Gaps = 61/392 (15%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE--NFETPEFIFIDLIKTYADAHRFQ 133
C+P Y V+ L + DI L+ + K E + IF +I + +
Sbjct: 219 CQPDLVTYGTVVNGLCKRG---DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 134 DSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
+V+LF ++ R N V + ++NC+ N G D S +LS++ E++ +
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYN-SLINCLCNYGRWSDA---SRLLSNMLEKKINPN---- 327
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+V + +I + K+ K+ +A + +M I PD + Y +++NG
Sbjct: 328 --------------VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ +A+++F ++ +P++ TYN ING CK VE G+++ M + G +
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL-- 369
+TY T++Q + + + + + K+M + ++ TYSI++ GL S G + A +
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 370 ----EEALN--------KGLCTQSSM------------------FDETICGLCQRGLVRK 399
E LN +G+C + ++ I GLC + L+++
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQE 553
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
A +L ++M + P + + L+ +++ D
Sbjct: 554 ADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 208 DYTNVIRS-LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
DY ++R+ L KV DA+ + M P IV + +L+ V + L ++
Sbjct: 49 DYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQ 108
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ LG+ D+YTY+++IN C+++ + + ++A M +LG +PD++T ++LL C +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ LV +M G + T++ +I GL EA L+++ + +G +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ GLC+RG + AL LL +M + ++ ++ S
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 5/235 (2%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A ++ M++ + +T + +++ C+ + + ++ + +EM + G V
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV--EDGVELFREMSQRGLVGNTV 434
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I+ + A + QM S+ + DI+ Y+++L+G+ A +F L
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ +++ YN I G+CK V + L KPDV+TYNT++ LC R L
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLL 551
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+L ++MK G + N TY+ +I D + L++E + G +S
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAS 606
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I K ++V D + + +M G+ + V YT ++ G D A+ +F +++
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ D+ TY++ ++GLC ++ + + +++ + ++ YNT+++ +CK ++
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L + K V+ TY+ MI GL SK + EA L + G S ++ I
Sbjct: 521 EAWDLFCSLSIKPDVV---TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 389 CGLCQRGLVRKALELLKQM 407
+ + EL+K+M
Sbjct: 578 RANLRDCDRAASAELIKEM 596
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 177/381 (46%), Gaps = 62/381 (16%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
YH +++ L+E +S +++ I +E + E + + +IKTY ++++F ++
Sbjct: 46 YHHILRRLSETRMVNHVSRIVELIRSQE-CKCDEDVALSVIKTYGKNSMPDQALDVFKRM 104
Query: 143 PKFRINRVGFAIEILNCMIND--------------------GFCVDGKTCSLILSSVCEQ 182
+ I AI N ++N G + +T ++++ C++
Sbjct: 105 RE--IFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKK 162
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
++ ++ GF+ M K GF + Y+ VI L K K+ DAL + ++M G+ PD+
Sbjct: 163 KEF--EKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVT 220
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELL---------------VLGLV-------------- 273
CY ++++G + ++D+ A EL+D LL + GL
Sbjct: 221 CYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWER 280
Query: 274 -------PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
D+YTY+ I+GLC NV+ + ++E + DV+TYNT+L C+ +
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK 340
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ EL + M+ K V N+ +Y+I+I GL G I EA + KG + +
Sbjct: 341 IKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGI 399
Query: 387 TICGLCQRGLVRKALELLKQM 407
I GLC G V KAL +++++
Sbjct: 400 FIHGLCVNGYVNKALGVMQEV 420
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 131/280 (46%), Gaps = 2/280 (0%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A+ ++ + + G +D + I+ +C+++ L +E V+EM K G
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL--EEASNLVKEMSKHGVELNSHVC 467
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L++ ++ +A L +M +G +P +V Y +++ G+ + +A E+L
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
G PD+ TY++ + GLC+ ++ +++ + G + DV+ +N L+ LC V +L+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
++ M+ + NL TY+ +++G GD A + GL ++ +
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
GLC V A+E + + P W L+ + V++
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 167/418 (39%), Gaps = 55/418 (13%)
Query: 58 PKQPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEF 117
KQ + SL F P + Y+ +IK + +F LD + K E F+ F
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK-EGFKPDVF 185
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPK---------FRINRVGF--------AIEILNCM 160
+ +I A A + D++ LF ++ + + I GF A+E+ + +
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 161 INDGFCV-DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
+ D + KT ++++S + + + D+ L + MK+ + Y+++I L
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRV--DDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF--------------- 264
V A + N++ D+V Y +L G ++ EL+
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 265 ------------DELLVL-------GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
DE ++ G D TY ++I+GLC V + ++ +E
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G DV Y +++ LCK + L LVKEM G+ LN + +I GL + EA
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E G ++ ICGLC+ G +A +K+M + P + + LL
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 159/375 (42%), Gaps = 26/375 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S+Y P + ++ +I L++ + D + + +++ E E + + LI
Sbjct: 245 LLEDSSVY---PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER-EKDLYTYSSLIHGL 300
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTC-SLILSSVCEQRDL 185
DA + ++F ++ + + + N M+ GFC GK SL L + E ++
Sbjct: 301 CDAGNVDKAESVFNELDE---RKASIDVVTYNTMLG-GFCRCGKIKESLELWRIMEHKNS 356
Query: 186 SS-----------------DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGI 228
+ DE + M G+ Y I L V ALG+
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
+ +++S G D+ Y +++ + ++ +A L E+ G+ + + N I GL +
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
+ + + M + G +P V++YN L+ LCK + VKEM G +L+T
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
YSI++ GL I A L + L GL T M + I GLC G + A+ ++ M
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 409 DKDVSPGARVWEALL 423
++ + + L+
Sbjct: 597 HRNCTANLVTYNTLM 611
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 130/260 (50%), Gaps = 2/260 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+ A+E+L M +D S+I+ +C +D S D EM+ GF ++
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLC--KDGSLDNAFNLFNEMEIKGFKADII 299
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + D +L M I P++V ++++++ + + +A++L E+
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ G+ P+ TYN I+G CK+N +E I+M+ M G PD++T+N L+ CK +
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ EL +EM +G++ N TY+ ++ G G + A L +E +++ + +
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 388 ICGLCQRGLVRKALELLKQM 407
+ GLC G + KALE+ ++
Sbjct: 480 LDGLCDNGELEKALEIFGKI 499
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 6/256 (2%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+L ++M+ G + + +I + K+ A + ++ G +PD V + +LN
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ ++ +A EL D ++ +G P + T N +NGLC V + +I M E G +P
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
+ +TY +L +CK + EL+++M+ + I L+ YSI+IDGL G + A L
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
E KG ++ I G C G +LL+ M + +SP + L+ S
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS---- 342
Query: 430 LDFVNTSFIRLVDQIL 445
FV +R DQ+L
Sbjct: 343 --FVKEGKLREADQLL 356
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 168/374 (44%), Gaps = 25/374 (6%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIF 119
Q + LL N + Y +I L ++ + ++ + +E + F+ +
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIITY 301
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGKTCSLILS 177
LI + +A R+ D L + K +I N V F++ I D F +GK
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI------DSFVKEGKL------ 349
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
+D+LL +EM + G + Y ++I K+ ++ +A+ +++ M S G
Sbjct: 350 -------READQLL---KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
PDI+ + +++NG ELF E+ + G++ + TYN + G C+ +E K
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M +PD+++Y LL LC EL + E+ +++ + L++ Y I+I G+
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+ + +A L KG+ + ++ I LC++ + KA L ++M ++ +P
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 418 VWEALLLSSVSKLD 431
+ L+ + + D
Sbjct: 580 TYNILIRAHLGDDD 593
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R ++ +A + ++ G+ D + +L+ +C + +S E L V M ++G
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS--EALELVDRMVEMGHKPT 192
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ ++ L KV DA+ ++++M G +P+ V Y VLN + A EL
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + D Y++ I+GLCK +++ + ME G K D+ITYNTL+ C
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ +L+++M + I N+ T+S++ID +G + EA LL+E + +G+ + ++
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ + +A++++ M K P + L+
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 136/275 (49%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A+E+++ M+ G T + +++ +C +S +L + M + GF V
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL--IDRMVETGFQPNEVT 230
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y V+ + K + A+ +L +M+ IK D V Y+++++G+ A LF+E+
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ G D+ TYN I G C + G K++ M + P+V+T++ L+ + K +L
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
+L+KEM +GI N TY+ +IDG + + EA +++ ++KG F+ I
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G C+ + LEL ++M+ + V + L+
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 2/257 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ AI++++ MI+ G D T +++++ C+ + D+ L +EM G V
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI--DDGLELFREMSLRGVIANTV 439
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +++ + K+ A + +M S ++PDIV Y ++L+G+ + KA E+F ++
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ D+ Y + I+G+C + V+ + + G K D YN ++ LC+ L
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
++ L ++M +G + TY+I+I D A L+EE + G S
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 388 ICGLCQRGLVRKALELL 404
I L L + L++L
Sbjct: 620 INMLSSGELDKSFLDML 636
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 95/210 (45%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
+ Y + + S + K DA+ + M P ++ + + + + + Y L +
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G+ +YT ++ IN C+ + + + +LG +PD + +NTLL LC
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ ELV M G L T + +++GL G + +A L++ + G +
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGA 416
+ +C+ G A+ELL++M ++++ A
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDA 263
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 148/306 (48%), Gaps = 6/306 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R R+ L +I GF VD + +L +C + +SD + ++ M +LG
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR-TSDAMDIVLRRMTELGCIPN 157
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSD---GIKPDIVCYTMVLNGVIVQEDYVKAEE 262
+ Y +++ L + + +AL +L+ M D G PD+V YT V+NG + D KA
Sbjct: 158 VFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ E+L G++PDV TYN I LCK ++ ++++ M + G PD +TYN++L C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ +K+M+ G+ ++ TYS+++D L G +EA + + +GL + +
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV--SKLDFVNTSFIRL 440
+ + G +G + + LL M + P V+ L+ + K+D F ++
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 441 VDQILN 446
Q LN
Sbjct: 398 RQQGLN 403
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+E+LN M+ +G D T + IL C E +GF+++M+ G +V Y+ +
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSG--QPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
+ L K + +A I + M G+KP+I Y +L G + V+ L D ++ G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PD Y +++ I KQ V+ + + + M + G P+ +TY ++ LCK +
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
++M +G+ Y+ +I GL + A L+ E L++G+C + F+ I C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ G V ++ +L + M V P + L+
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 137/307 (44%), Gaps = 20/307 (6%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ S + +P Y +++ A ++ +LD + R ++F LI Y
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD-LMVRNGIHPDHYVFSILICAY 381
Query: 127 ADAHRFQDSVNLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDG 169
A + ++ +F K+ + +N RV A+ MI++G
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
+ ++ +C E L + EM G C + + ++I S K+ +V ++ +
Sbjct: 442 IVYNSLIHGLCTCNKWERAEEL--ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
M G+KP+++ Y ++NG + +A +L ++ +GL P+ TY+ ING CK
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+ +E + + ME G PD+ITYN +LQ L + R +EL + G + L TY
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Query: 350 SIMIDGL 356
+I++ GL
Sbjct: 620 NIILHGL 626
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 19/267 (7%)
Query: 149 RVGFAIEIL--NCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGM 206
R+G ++ N +IN G+C+ GK DE + + M +G
Sbjct: 504 RIGVKPNVITYNTLIN-GYCLAGKM----------------DEAMKLLSGMVSVGLKPNT 546
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V Y+ +I K ++ DAL + +M+S G+ PDI+ Y ++L G+ A+EL+
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ G ++ TYN+ ++GLCK + ++M + + K + T+N ++ AL KV
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
+ ++L G+V N TY +M + + +G + E L + G S M +
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Query: 387 TICGLCQRGLVRKALELLKQMADKDVS 413
+ L QRG + +A L + +K S
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFS 753
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D T + I++++C+ + + D+ + + M K G + Y +++
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAM--DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +A+G L +M+SDG++PD+V Y+++++ + ++A ++FD + GL P++ TY
Sbjct: 280 GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTY 339
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ G + + ++ M G PD ++ L+ A K ++++ + +M+
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+G+ N TY +I L G + +A E+ +++GL + +++ I GLC +
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 400 ALELLKQMADKDV 412
A EL+ +M D+ +
Sbjct: 460 AEELILEMLDRGI 472
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 39/191 (20%)
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIA---------------------C--------- 301
+ PD+ TY + I C+ ++ G + C
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 302 ------MEELGSKPDVITYNTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
M ELG P+V +YN LL+ LC + +E L ++ + + G ++ +Y+ +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G +GD +A E L++G+ ++ I LC+ + KA+E+L M V
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 413 SPGARVWEALL 423
P + ++L
Sbjct: 263 MPDCMTYNSIL 273
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+I+R+ A+ + M + G D T ++IL + + R ++ + L +V+ + + G
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL-YVR-ITESGTQIE 615
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y ++ L K + DAL + + +K + + ++++ ++ +A++LF
Sbjct: 616 LSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV 675
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
GLVP+ +TY + + Q +E ++ ME+ G D N +++ L +
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
E+ R + + K L T S+ ID L+
Sbjct: 736 EITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 131/249 (52%), Gaps = 2/249 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
I+ +C+ + + D+ L +EM+ G +V Y+++I L + DA +L+ M
Sbjct: 262 IIDGLCKYKHM--DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
I PD+ ++ +++ + + V+AE+L+DE++ + P + TY+ ING C + ++
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+M M PDV+TYNTL++ CK + + E+ +EM +G+V N TY+I+I
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
GL GD A + +E ++ G+ ++ + GLC+ G + KA+ + + + + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 415 GARVWEALL 423
+ ++
Sbjct: 500 TIYTYNIMI 508
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 142/278 (51%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N G + T S++++ C + L L + +M KLG+
Sbjct: 93 KMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPL--ALAVLGKMMKLGYEPN 150
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++++ +++ +A+ +++QM G +P+ V + +++G+ + +A L D
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 210
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G PD+ TY V +NGLCK+ + + ++ ME+ +P V+ YNT++ LCK +
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L KEM+ KGI N+ TYS +I L + G +A LL + + + + F
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 330
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G + +A +L +M + + P + +L+
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 139/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ + T S +L+ C + +S E + V +M G+
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS--EAVALVDQMFVTGYQPN 185
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V + +I L K +A+ ++++M + G +PD+V Y +V+NG+ + D A L +
Sbjct: 186 TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ L P V YN I+GLCK +++ + + ME G +P+V+TY++L+ LC
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I ++ T+S +ID +G ++EA L +E + + + +
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A ++ + M K P + L+
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 39/335 (11%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P Y +I L ++ D S +L D IE++ N + F F LI + + ++
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV--FTFSALIDAFVKEGKLVEA 345
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCV---------------------DGKTCSL 174
L+ ++ K I+ +I + +IN GFC+ D T +
Sbjct: 346 EKLYDEMVKRSIDP---SIVTYSSLIN-GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ C+ + + +E + +EM + G V Y +I+ L + A I +M S
Sbjct: 402 LIKGFCKYKRV--EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
DG+ P+I+ Y +L+G+ KA +F+ L + P +YTYN+ I G+CK VE
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
G + + G KPDV+ YNT++ C+ L KEMK G + N Y+ +I
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 355 GLASKGDI---------IEACGLLEEALNKGLCTQ 380
GD + +CG +A GL T
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 170/394 (43%), Gaps = 60/394 (15%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C+P Y V+ L + ++L+ +E+ + E I+ +I D
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDD 274
Query: 135 SVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLG 192
++NLF ++ R N V ++ +++C+ N G D S +LS + E R ++ D
Sbjct: 275 ALNLFKEMETKGIRPNVVTYS-SLISCLCNYGRWSDA---SRLLSDMIE-RKINPD---- 325
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
+ ++ +I + VK+ K+ +A + ++M I P IV Y+ ++NG
Sbjct: 326 -------------VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG------ 306
+ + +A+++F+ ++ PDV TYN I G CK VE G+++ M + G
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 307 -----------------------------SKPDVITYNTLLQALCKVRELNRLRELVKEM 337
P+++TYNTLL LCK +L + + + +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 338 KWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLV 397
+ + + TY+IMI+G+ G + + L KG+ ++ I G C++G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 398 RKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
+A L K+M + P + + L+ + + D
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 115/240 (47%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
+L D+ + EM K +++++ ++ ++ K K + + QM++ GI +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y++++N + A + +++ LG P++ T + +NG C + + ++ M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
G +P+ +T+NTL+ L + + L+ M KG +L TY ++++GL +GD
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL + L +++ I GLC+ + AL L K+M K + P + +L+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 104/210 (49%)
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R+ + + K+ DA+ + +M P I+ ++ +L+ + + L +++ LG+
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
+ YTY++ IN C+++ + + ++ M +LG +P+++T ++LL C + ++ L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V +M G N T++ +I GL EA L++ + KG + + GLC+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
RG A LL +M + PG ++ ++
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 130/251 (51%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S ++ S+C+ R D+ L EM+ G ++ Y+++I L E+ DA +L+ M
Sbjct: 264 STVIDSLCKYR--HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I P++V + +++ + + V+AE+L+DE++ + PD++TY+ ING C + +
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ M M P+V+TYNTL+ CK + ++ EL +EM +G+V N TY+ +
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G D A + ++ ++ G+ ++ + GLC+ G + KA+ + + + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 413 SPGARVWEALL 423
P + ++
Sbjct: 502 EPTIYTYNIMI 512
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ T S +L+ C + +S + + V +M ++G+
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS--DAVALVDQMVEMGYRPD 189
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ +T +I L K +A+ ++++M G +P++V Y +V+NG+ + D A L +
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + +V Y+ I+ LCK + + + + ME G +P+VITY++L+ LC
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I N+ T++ +ID +G ++EA L +E + + + +
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A + + M KD P + L+
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 133/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++++ C + +S L + +M KLG+ +V ++++ +++ DA+ +++
Sbjct: 122 TYNILINCFCRRSQISL--ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G +PD + +T +++G+ + +A L D ++ G P++ TY V +NGLCK+
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+++ ++ ME + +V+ Y+T++ +LCK R + L EM+ KG+ N+ TYS
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I L + +A LL + + + + F+ I + G + +A +L +M +
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 411 DVSPGARVWEALL 423
+ P + +L+
Sbjct: 360 SIDPDIFTYSSLI 372
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 129/271 (47%), Gaps = 4/271 (1%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
+LS++ + + D ++ ++M++LG + Y +I ++ ++ AL +L +M
Sbjct: 91 LLSAIAKMKKF--DLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
G +P IV + +LNG + A L D+++ +G PD T+ I+GL N
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ ++ M + G +P+++TY ++ LCK +++ L+ +M+ I N+ YS +ID
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
L +A L E NKG+ + I LC A LL M ++ ++P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 415 GARVWEALLLSSVSKLDFVNTSFIRLVDQIL 445
+ AL+ + V + V +L D+++
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAE--KLYDEMI 357
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 153/359 (42%), Gaps = 20/359 (5%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y+ +I SQ ++L + K +E L+ Y R D+V L +
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 142 IPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + F N+ A+ +++ M+ G + T ++++ +C++ D
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ D + +M+ +V Y+ VI SL K DAL + +M++ G++P+++ Y
Sbjct: 241 I--DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+ +++ + E + A L +++ + P+V T+N I+ K+ + K+ M +
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
PD+ TY++L+ C L+ + + + M K N+ TY+ +I+G I E
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L E +GL + + I G Q A + KQM V P + LL
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 32/288 (11%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D IE++ N P + F LI + + +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN---PNVVTFNALIDAFVKEGKLVE 348
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCS 173
+ L+ ++ K I+ F L IN GFC+ + T +
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSL---IN-GFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
+++ C+ + + DE + +EM + G V YT +I + +A + QM
Sbjct: 405 TLINGFCKAKRI--DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
SDG+ P+I+ Y +L+G+ KA +F+ L + P +YTYN+ I G+CK VE
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
G + + G KPDVI YNT++ C+ L ++M+ G
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 108/225 (48%)
Query: 201 GFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKA 260
F G DY ++R+ + K+ DA+G+ M P I + +L+ + + +
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 261 EELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQA 320
L +++ LG+ ++YTYN+ IN C+++ + + ++ M +LG +P ++T ++LL
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 321 LCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
C + ++ LV +M G + T++ +I GL EA L++ + +G
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ + GLC+RG + A LL +M + ++ ++ S
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 1/214 (0%)
Query: 211 NVIRSLVKKEKVFD-ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
N + S + K K FD + + +M+ GI ++ Y +++N + A L +++
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
LG P + T + +NG C + + ++ M E+G +PD IT+ TL+ L + +
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
LV M +G NL TY ++++GL +GDI A LL + + ++ I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+ AL L +M +K V P + +L+
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 181/399 (45%), Gaps = 24/399 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIK 124
++ Y+CEP +Y+ ++ L ++ F V ++ R+ TP+ + F +K
Sbjct: 97 NVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKV--YMRMRDRGITPDVYSFTIRMK 154
Query: 125 TYADAHRFQDSVNLFYKIPK--FRINRVGF---------------AIEILNCMINDGFCV 167
++ R ++ L + +N V + E+ M+ G +
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
T + +L +C++ D+ E L + ++ K G + Y I+ L ++ ++ A+
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKL--LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++ + G KPD++ Y ++ G+ + +AE +++ GL PD YTYN I G C
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K V+ +++ G PD TY +L+ LC E NR L E KGI N+
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
Y+ +I GL+++G I+EA L E KGL + F+ + GLC+ G V A L+K M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 408 ADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
K P + L+ ++L N + ++D +L+
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENA--LEILDVMLD 489
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 167/374 (44%), Gaps = 26/374 (6%)
Query: 78 PPPE--AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
P P+ Y+ +I L +NS+F + L + E E + + LI Y Q
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKM-VNEGLEPDSYTYNTLIAGYCKGGMVQ-- 338
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
A I+ + +GF D T ++ +C + + ++ L
Sbjct: 339 ----------------LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE--TNRALALFN 380
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
E G ++ Y +I+ L + + +A + N+M G+ P++ + +++NG+
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
A+ L ++ G PD++T+N+ I+G Q +E ++++ M + G PDV TYN
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
+LL LCK + + E K M KG NL T++I+++ L + EA GLLEE NK
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADK-DVSPGARVWEALLLSSVSKLDFVN 434
+ + F I G C+ G + A L ++M + VS + ++ + KL+
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620
Query: 435 TS--FIRLVDQILN 446
F +VD+ L
Sbjct: 621 AEKLFQEMVDRCLG 634
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 174/415 (41%), Gaps = 96/415 (23%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETP--EFIFIDLIKTYADAHRFQDSVNLF 139
Y VI+ L +F + VL ++ REN E +++ +K Y + Q++VN+F
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVL--VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 99
Query: 140 YKIPKFRINRVGFAIE-ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
++ + F+ I++ +++ G+ D+ M+
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLVDSGY---------------------FDQAHKVYMRMR 138
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE--- 255
G + +T ++S K + AL +LN M S G + ++V Y V+ G +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 256 --------------------------------DYVKAEELFDELLVLGLVPDVYTYNVYI 283
D + E+L D+++ G++P+++TYN++I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR-------------- 329
GLC++ ++ ++M+ C+ E G KPDVITYN L+ LCK +
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 330 ---------------------LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGL 368
+V + + G V + TY +IDGL +G+ A L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 369 LEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
EAL KG+ +++ I GL +G++ +A +L +M++K + P + + L+
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 130/300 (43%), Gaps = 38/300 (12%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A ++ N M G + +T +++++ +C+ +S + G V+ M G+ + + +
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD--GLVKVMISKGYFPDIFTFNIL 467
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + K+ +AL IL+ M +G+ PD+ Y +LNG+ + E + ++ G
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
P+++T+N+ + LC+ ++ + ++ M+ PD +T+ TL+ CK +L+
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 333 LVKEMK-----------WKGIV------LNLQ-------------------TYSIMIDGL 356
L ++M+ + I+ LN+ TY +M+DG
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 357 ASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGA 416
G++ L E + G + I LC V +A ++ +M K + P A
Sbjct: 648 CKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+EIL+ M+++G D T + +L+ +C+ ++++ + M + G + + +
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF--EDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL-VLG 271
+ SL + K+ +ALG+L +MK+ + PD V + +++G D A LF ++
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ TYN+ I+ ++ NV K+ M + PD TY ++ CK +N
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
+ + EM G + +L T +I+ L + + EA G++ + KGL ++ TIC
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV---NTIC 712
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 136/264 (51%), Gaps = 3/264 (1%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
FR ++ A L MI GF D TC+LIL+++CE + + + + ++M LGF
Sbjct: 228 FRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV--NRAIWYFRKMIDLGFKP 285
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
++++T++I L KK + A +L +M +G KP++ +T +++G+ + KA LF
Sbjct: 286 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 265 DELLVLGLV-PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
+L+ P+V+TY I G CK++ + + + M+E G P+V TY TL+ CK
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
R EL+ M +G + N+ TY+ ID L K EA LL +A + GL
Sbjct: 406 AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 465
Query: 384 FDETICGLCQRGLVRKALELLKQM 407
+ I C++ + +AL +M
Sbjct: 466 YTILIQEQCKQNDINQALAFFCRM 489
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 8/247 (3%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T + ++ C++ L+ E+L MK+ G + YT +I K A ++N
Sbjct: 360 TYTSMIGGYCKEDKLNRAEML--FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
M +G P+I Y ++ + + +A EL ++ GL D TY + I CKQN
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQ 347
++ + M + G + D+ N L+ A C K++E RL +LV + G++ +
Sbjct: 478 DINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL---GLIPTKE 534
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ MI +GDI A G S + I GLC++ +V +A +L + M
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Query: 408 ADKDVSP 414
D+ +SP
Sbjct: 595 IDRGLSP 601
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++R+ + ++ +A+G++ M++ G+ P + VL + AE +FDE+ V G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+VPD +Y + + G + ++ + + M + G PD T +L ALC+ +NR
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
++M G NL ++ +IDGL KG I +A +LEE + G I GL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 392 CQRGLVRKALELLKQMADKDV-SPGARVWEALL--LSSVSKLDFVNTSFIRLVDQIL 445
C+RG KA L ++ D P + +++ KL+ F R+ +Q L
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 13/253 (5%)
Query: 180 CEQRDLSS----DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
C R+ S +E +G V +M+ G + V+ V+ + A + ++M
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ PD Y +++ G +A+ ++ G +PD T + + LC+ V
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
I M +LG KP++I + +L+ LCK + + E+++EM G N+ T++ +IDG
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 356 LASKGDIIEACGLL-----EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
L +G +A L + + T +SM I G C+ + +A L +M ++
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSM----IGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 411 DVSPGARVWEALL 423
+ P + L+
Sbjct: 388 GLFPNVNTYTTLI 400
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
+R A E+LN + G DG T ++++ C+Q D+ ++ L F M K GF M
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI--NQALAFFCRMNKTGFEADMR 499
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+I + +++K+ ++ + + S G+ P YT +++ + D A + F +
Sbjct: 500 LNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM 559
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
G VPD +TY I+GLCK++ V+ K+ M + G P +T TL CK
Sbjct: 560 KRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 201/484 (41%), Gaps = 74/484 (15%)
Query: 21 PLSPY----KAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQPHILSSLLHSFSIYNC 76
PL P+ + L + +K+ +Q+ +P H S+ +S +++
Sbjct: 16 PLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANS-NLF-- 72
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+ P + +I+ LA + Q + +L + K + F E +FI +I Y + +V
Sbjct: 73 KHTPLTFEVMIRKLAMDGQVDSVQYLLQQM-KLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 137 NLFYKIPKFRI-----------------NRVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
+FY+I +F NR+ + M DGF + T +++L ++
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK--SDGI 237
C+ + + L + EM G C V YT VI S+ + +G++ + + ++
Sbjct: 192 CKNNKVDGAKKL--LVEMSNKGCCPDAVSYTTVISSMCE-------VGLVKEGRELAERF 242
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
+P + Y ++NG+ + DY A EL E++ G+ P+V +Y+ IN LC +E
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 298 MIACM------------------------------------EELGSKPDVITYNTLLQAL 321
+ M G +P+V+ YNTL+Q
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C + + + M+ G N++TY +I+G A +G + A + + L G C
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIR 439
++ + LC+ ++A L++ M+ ++ +P + A + L +LD+ F +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 440 LVDQ 443
+ Q
Sbjct: 483 MEQQ 486
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 162/385 (42%), Gaps = 63/385 (16%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL S C P +Y VI S C++ V + E E FE ++ LI
Sbjct: 203 LLVEMSNKGCCPDAVSYTTVI------SSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
H ++ A E++ M+ G + + S +++ +C +
Sbjct: 257 CKEHDYKG------------------AFELMREMVEKGISPNVISYSTLINVLCNSGQI- 297
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM-KSDGIKPDIVCYT 245
+ F+ +M K G + +++++ + FDAL + NQM + G++P++V Y
Sbjct: 298 -ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++ G + VKA +F + +G P++ TY ING K+ +++ + + M
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 306 GSKPDVITYNTLLQALC---KVRELNRLRELVKE----------------------MKWK 340
G P+V+ Y +++ALC K +E L E++ + + W
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 341 GIVL-----------NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
V N+ TY+ ++DGLA I EA GL E +G+ SS ++ +
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536
Query: 390 GLCQRGLVRKALELLKQMADKDVSP 414
G C GL AL+L+ +M SP
Sbjct: 537 GSCNAGLPGIALQLVGKMMVDGKSP 561
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 6/232 (2%)
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
M+++G + Y ++I K+ + A+ I N+M + G P++V YT ++ +
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS-KPDVIT 313
+ +AE L + + P V T+N +I GLC ++ K+ ME+ P+++T
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVT 495
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN LL L K + L +E+ +G+ + TY+ ++ G + G A L+ + +
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
G + I C++G +A ++L VS G R W ++S
Sbjct: 556 VDGKSPDEITMNMIILAYCKQGKAERAAQMLDL-----VSCGRRKWRPDVIS 602
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 128/310 (41%), Gaps = 30/310 (9%)
Query: 74 YNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQ 133
+ +P AY+ +++ + SV H+E E +P I+TY
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHME--EIGCSPN------IRTYGSL---- 393
Query: 134 DSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF 193
+N F K R + G A+ I N M+ G C + + ++ ++C E L
Sbjct: 394 --INGFAK----RGSLDG-AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL-- 444
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDG-IKPDIVCYTMVLNGVI 252
++ M K + + I+ L ++ A + QM+ P+IV Y +L+G+
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLA 504
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A L E+ + G+ TYN ++G C ++++ M G PD I
Sbjct: 505 KANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEI 564
Query: 313 TYNTLLQALCKVRELNRLRELVK-----EMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
T N ++ A CK + R +++ KW+ V+ +Y+ +I GL +
Sbjct: 565 TMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI---SYTNVIWGLCRSNCREDGVI 621
Query: 368 LLEEALNKGL 377
LLE ++ G+
Sbjct: 622 LLERMISAGI 631
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SL+ S NC P ++ IK L + + V +E++ + +L+
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 126 YADAHRFQDSVNLFYKI-----------------PKFRINRVGFAIEILNCMINDGFCVD 168
A A+R +++ L +I G A++++ M+ DG D
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 169 GKTCSLILSSVCEQ-RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALG 227
T ++I+ + C+Q + + ++L V ++ + ++ YTNVI L + D +
Sbjct: 563 EITMNMIILAYCKQGKAERAAQMLDLVSCGRR-KWRPDVISYTNVIWGLCRSNCREDGVI 621
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+L +M S GI P I +++++N I+ +D V+A + F
Sbjct: 622 LLERMISAGIVPSIATWSVLINCFIL-DDIVRAHDQF 657
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 24/249 (9%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS 135
C P Y +++ L +S+F + S+++ I +EN F IK DA R +
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIE-IMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 136 VNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ 195
+F ++ + +R I N ++ DG + +E G +
Sbjct: 477 EKVFRQMEQ--QHRCPPNIVTYNELL-DGLAKANRI----------------EEAYGLTR 517
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
E+ G + Y ++ AL ++ +M DG PD + M++ Q
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577
Query: 256 DYVKAEELFDELLVLG---LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+A ++ D L+ G PDV +Y I GLC+ N E G+ ++ M G P +
Sbjct: 578 KAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIA 636
Query: 313 TYNTLLQAL 321
T++ L+
Sbjct: 637 TWSVLINCF 645
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 151/313 (48%), Gaps = 37/313 (11%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R NRV A+ +++ M+ G+ D + I+ S+C+ + + ++ F +E+++ G
Sbjct: 167 RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV--NDAFDFFKEIERKGIRPN 224
Query: 206 MVDYTNVIRSL-----------------------------------VKKEKVFDALGILN 230
+V YT ++ L VK KV +A +
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
+M I PDIV Y+ ++NG+ + + +A ++FD ++ G + DV +YN ING CK
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
VE G+K+ M + G + +TYNTL+Q + ++++ +E +M + GI ++ TY+
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
I++ GL G++ +A + E+ + + + I G+C+ G V +A L ++ K
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 411 DVSPGARVWEALL 423
+ P + ++
Sbjct: 465 GLKPDIVTYTTMM 477
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
+V A+ IL M+ G+ D T +++ C + +S + + V +M ++G+ +V
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVS--DAVSLVDKMVEIGYKPDIVA 192
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I SL K ++V DA +++ GI+P++V YT ++NG+ + A L +++
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ P+V TY+ ++ K V ++ M + PD++TY++L+ LC ++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++ M KG + ++ +Y+ +I+G + + L E +GL + + ++ I
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G Q G V KA E QM +SP + LL
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 158/360 (43%), Gaps = 38/360 (10%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSV 136
+P AY+ +I +L + + D IE R+ + L+ ++ R+ D+
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 137 NLFYKIPKFRI--NRVGFAIEILNCMINDGFCVDGK----------------TCSLILSS 178
L + K +I N + ++ +L+ + +G ++ K T S +++
Sbjct: 246 RLLSDMIKKKITPNVITYS-ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 179 VCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIK 238
+C + DE M G +V Y +I K ++V D + + +M G+
Sbjct: 305 LCLHDRI--DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
+ V Y ++ G D KA+E F ++ G+ PD++TYN+ + GLC +E + +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
M++ D++TY T+++ +CK ++ L + KG+ ++ TY+ M+ GL +
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 359 KGDIIEACGLL----EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
KG + E L +E L K CT S G + + EL+K+M +P
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSD------------GDITLSAELIKKMLSCGYAP 530
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 4/228 (1%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ ++M+ LG + + VI +V AL IL +M G +PD V +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 161
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG + A L D+++ +G PD+ YN I+ LCK V +E G
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+P+V+TY L+ LC + L+ +M K I N+ TYS ++D G ++EA
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPG 415
L EE + + + I GLC + +A QM D VS G
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA----NQMFDLMVSKG 325
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 35/238 (14%)
Query: 221 KVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYN 280
K+ DA+ + + M P IV + +L+ ++ + Y L ++ VLG+ D+YT+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 281 VYI-----------------------------------NGLCKQNNVEAGIKMIACMEEL 305
+ I NG C++N V + ++ M E+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 306 GSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEA 365
G KPD++ YN ++ +LCK + +N + KE++ KGI N+ TY+ +++GL + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 366 CGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LL + + K + + + + G V +A EL ++M + P + +L+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 131/251 (52%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
+ I+ ++C +++ ++ L EM G +V Y ++IR L + DA +L+ M
Sbjct: 259 TTIIDALCNYKNV--NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I P++V ++ +++ + + V+AE+L+DE++ + PD++TY+ ING C + +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ M M P+V+TYNTL++ CK + + EL +EM +G+V N TY+ +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I GL GD A + ++ ++ G+ + + GLC+ G + KAL + + + +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 413 SPGARVWEALL 423
P + ++
Sbjct: 497 EPDIYTYNIMI 507
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 169/360 (46%), Gaps = 25/360 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+L+ C+P Y V+ L + S+L +EK + E I+ +I
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYTTIIDA 264
Query: 126 YADAHRFQDSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR 183
+ D++NLF ++ R N V + ++ C+ N G D S +LS + E R
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYN-SLIRCLCNYGRWSDA---SRLLSDMIE-R 319
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
++ + +V ++ +I + VK+ K+ +A + ++M I PDI
Sbjct: 320 KINPN-----------------VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y+ ++NG + + +A+ +F+ ++ P+V TYN I G CK VE G+++ M
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ G + +TYNTL+Q L + + + +++ K+M G+ ++ TYSI++DGL G +
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+A + E + ++ I G+C+ G V +L ++ K V P ++ ++
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ D T S +L+ C + +S E + V +M + +
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS--EAVALVDQMFVMEYQPN 184
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V + +I L K +A+ ++++M + G +PD+ Y V+NG+ + D A L
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV Y I+ LC NV + + M+ G +P+V+TYN+L++ LC
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I N+ T+S +ID +G ++EA L +E + + + +
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A + + M KD P + L+
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 32/351 (9%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y+ +I+ L ++ D S +L D IE++ N P + F LI + + +
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN---PNVVTFSALIDAFVKEGKLVE 343
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCS 173
+ L+ ++ K I+ F + +IN GFC+ + T +
Sbjct: 344 AEKLYDEMIKRSIDPDIFT---YSSLIN-GFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ C+ + + +E + +EM + G V Y +I+ L + A I +M
Sbjct: 400 TLIKGFCKAKRV--EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
SDG+ PDI+ Y+++L+G+ KA +F+ L + PD+YTYN+ I G+CK VE
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G + + G KP+VI Y T++ C+ L +EMK G + N TY+ +I
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
GD + L++E + G +S I L L + LE+L
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 127/258 (49%), Gaps = 2/258 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ + M+ L + + Y +I ++ ++ AL +L +M G +PDIV + +
Sbjct: 97 DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSL 156
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG + +A L D++ V+ P+ T+N I+GL N + +I M G
Sbjct: 157 LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC 216
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PD+ TY T++ LCK +++ L+K+M+ I ++ Y+ +ID L + ++ +A
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 427
L E NKG+ ++ I LC G A LL M ++ ++P + AL+ + V
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 428 SKLDFVNTSFIRLVDQIL 445
+ V +L D+++
Sbjct: 337 KEGKLVEAE--KLYDEMI 352
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 139/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N D + +++++ C + L L + +M KLG+
Sbjct: 92 KMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPL--ALAVLGKMMKLGYEPD 149
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V ++++ +++ +A+ +++QM +P+ V + +++G+ + +A L D
Sbjct: 150 IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALID 209
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ G PD++TY +NGLCK+ +++ + ++ ME+ + DV+ Y T++ ALC +
Sbjct: 210 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N L EM KGI N+ TY+ +I L + G +A LL + + + + F
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G + +A +L +M + + P + +L+
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+ E + + M G + Y V+ L K+ + AL +L +M+ I+ D+V YT
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ + ++ A LF E+ G+ P+V TYN I LC ++++ M E
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
P+V+T++ L+ A K +L +L EM + I ++ TYS +I+G + EA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ E ++K ++ I G C+ V + +EL ++M+ + + + L+
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 102/210 (48%)
Query: 214 RSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLV 273
R+++ K+ DA+ + +M P IV + +L+ + + L + + L +
Sbjct: 53 RNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 112
Query: 274 PDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLREL 333
D+Y+YN+ IN C+++ + + ++ M +LG +PD++T ++LL C + ++ L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 334 VKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQ 393
V +M N T++ +I GL EA L++ + +G + + GLC+
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 394 RGLVRKALELLKQMADKDVSPGARVWEALL 423
RG + AL LLK+M + ++ ++
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 111/240 (46%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
DL D+ + EM + +V++ ++ ++ K K + + +M++ I D+
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
Y +++N + A + +++ LG PD+ T + +NG C + + ++ M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
+ +P+ +T+NTL+ L + + L+ M +G +L TY +++GL +GDI
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL++ + ++ I LC V AL L +M +K + P + +L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
>sp|Q84J71|PP161_ARATH Pentatricopeptide repeat-containing protein At2g17670
OS=Arabidopsis thaliana GN=At2g17670 PE=2 SV=1
Length = 463
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 151/328 (46%), Gaps = 24/328 (7%)
Query: 122 LIKTYADAHRFQDSVNLFYKI----PKFRINRVGFAI-----------------EILNCM 160
++++Y D+V LF I P FR R F I +LN M
Sbjct: 91 VLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLM 150
Query: 161 INDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKE 220
+N+G D T + + S+CE + DE ++E+ + Y +++ L K +
Sbjct: 151 VNNGLEPDQVTTDIAVRSLCETGRV--DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 221 KVFDALGILNQMKSD-GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+ +++M+ D +KPD+V +T++++ V ++ +A L +L G PD + Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
N + G C + + + M+E G +PD ITYNTL+ L K + R +K M
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
G + TY+ +++G+ KG+ + A LLEE +G ++ + GLC+ L+ K
Sbjct: 329 AGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDK 388
Query: 400 ALELLKQMADKDVSPGARVWEALLLSSV 427
+EL + M V + + L+ S V
Sbjct: 389 GMELYEMMKSSGVKLESNGYATLVRSLV 416
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++++ +VC ++L E + V ++ GF Y +++ K +A+G+ +M
Sbjct: 234 TILIDNVCNSKNLR--EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
K +G++PD + Y ++ G+ +A ++ G PD TY +NG+C++
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ ME G P+ TYNTLL LCK R +++ EL + MK G+ L Y+ +
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL 411
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ L G + EA + + A++ + +S +
Sbjct: 412 VRSLVKSGKVAEAYEVFDYAVDSKSLSDASAY 443
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R A+++L M D T S I+ S+C RD D + +EM+ G
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC--RDGCIDAAISLFKEMETKGIKSS 262
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V Y +++R L K K D +L M S I P+++ + ++L+ + + +A EL+
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G+ P++ TYN ++G C QN + M+ M PD++T+ +L++ C V+
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ ++ + + +G+V N TYSI++ G G I A L +E ++ G+ +
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC G + KALE+ + + + G ++ ++
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 141/280 (50%), Gaps = 17/280 (6%)
Query: 144 KFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFC 203
+ +N + I LN MIN FC KTC + +LG V KLG+
Sbjct: 113 QLELNGIAHNIYTLNIMIN-CFCRCCKTCF-------------AYSVLGKVM---KLGYE 155
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
+ +I+ L + KV +A+ ++++M +G +PD+V Y ++NG+ D A +L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCK 323
++ + DV+TY+ I+ LC+ ++A I + ME G K V+TYN+L++ LCK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 324 VRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM 383
+ N L+K+M + IV N+ T+++++D +G + EA L +E + +G+
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 384 FDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + G C + + +A +L M SP + +L+
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 118/240 (49%)
Query: 184 DLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVC 243
D+ D+ + QEM + +VD++ ++ + ++ L Q++ +GI +I
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 244 YTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACME 303
+++N A + +++ LG PD T+N I GL + V + ++ M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 304 ELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDII 363
E G +PDV+TYN+++ +C+ + + +L+++M+ + + ++ TYS +ID L G I
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 364 EACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A L +E KG+ + ++ + GLC+ G LLK M +++ P + LL
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 118/234 (50%)
Query: 190 LLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLN 249
+L F ++++ G + +I + K A +L ++ G +PD + ++
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
Query: 250 GVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
G+ ++ +A L D ++ G PDV TYN +NG+C+ + + ++ MEE K
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
DV TY+T++ +LC+ ++ L KEM+ KGI ++ TY+ ++ GL G + LL
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ +++ + F+ + + G +++A EL K+M + +SP + L+
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +T++I+ ++V D + + + G+ + V Y++++ G AEELF
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E++ G++PDV TY + ++GLC +E +++ +++ ++ Y T+++ +CK
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ L + KG+ N+ TY++MI GL KG + EA LL + G ++
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGA 416
I + G + + +L+++M S A
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADA 578
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 2/235 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A +L+ M+ + D T + ++ C + + D+ + + + K G V
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV--DDGMKVFRNISKRGLVANAV 404
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y+ +++ + K+ A + +M S G+ PD++ Y ++L+G+ KA E+F++L
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + Y I G+CK VE + + G KP+V+TY ++ LCK L
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
+ L+++M+ G N TY+ +I GD+ + L+EE + G +S
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 579
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 100/219 (45%)
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
G V + +RS + K DA+ + +M P +V ++ + + + + +
Sbjct: 52 GNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFC 111
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+L + G+ ++YT N+ IN C+ ++ + +LG +PD T+NTL++ L
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+++ LV M G ++ TY+ +++G+ GD A LL + + + +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I LC+ G + A+ L K+M K + + +L+
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
>sp|Q9LK58|PP225_ARATH Pentatricopeptide repeat-containing protein At3g13150
OS=Arabidopsis thaliana GN=At3g13150 PE=2 SV=1
Length = 551
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 164/328 (50%), Gaps = 28/328 (8%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
Y I+ L E +F I VL + +K ++ ++ +F+ I ++ Y + + + LF ++
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFV-IRIMLLYGYSGMAEHAHKLFDEM 148
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEM-KKLG 201
P+ LNC K+ + +LS+ + L DE + +E+ +KLG
Sbjct: 149 PE------------LNCERT------VKSFNALLSAYVNSKKL--DEAMKTFKELPEKLG 188
Query: 202 FCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
+V Y +I++L +K + D L I +++ +G +PD++ + +L +E +V+ +
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
++D + L P++ +YN + GL + + +I M+ G PDV TYN L+ A
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Query: 322 CKVRELNRLRELVK---EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLC 378
R N L E++K EMK KG+ + TY ++I L KGD+ A + EEA+ L
Sbjct: 309 ---RVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Query: 379 TQSSMFDETICGLCQRGLVRKALELLKQ 406
++ +M+ + L G + +A +L+K
Sbjct: 366 SRPNMYKPVVERLMGAGKIDEATQLVKN 393
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 106/220 (48%), Gaps = 5/220 (2%)
Query: 209 YTNVIRSLVKKEKVFDALGILN-QMKSDGIKP-DIVCYTMVLNGVIVQEDYVKAEELFDE 266
Y+ IR L + +K +L Q K D IK D V M+L G ++ A +LFDE
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEH--AHKLFDE 147
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM-EELGSKPDVITYNTLLQALCKVR 325
+ L V ++N ++ ++ +K + E+LG PD++TYNT+++ALC+
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ + + +E++ G +L +++ +++ + +E + + +K L ++
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYN 267
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLS 425
+ GL + AL L+ M + +SP + AL+ +
Sbjct: 268 SRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 118 bits (295), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 152/314 (48%), Gaps = 19/314 (6%)
Query: 127 ADAHRFQDSVNLFYKIPKFR-----------------INRVGFAIEILNCMINDGFCVDG 169
+D + D+V+LF + K R +N+ I + M G D
Sbjct: 59 SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 170 KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGIL 229
T S+ ++ C + LS L + +M KLG+ +V ++++ +++ DA+ ++
Sbjct: 119 YTYSIFINCFCRRSQLSL--ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 230 NQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQ 289
+QM G KPD +T +++G+ + +A L D+++ G PD+ TY +NGLCK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 290 NNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTY 349
+++ + ++ ME+ + DV+ YNT++ LCK + ++ L EM KGI ++ TY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 350 SIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMAD 409
S +I L + G +A LL + + + + F I + G + +A +L +M
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 410 KDVSPGARVWEALL 423
+ + P + +L+
Sbjct: 357 RSIDPDIFTYSSLI 370
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ +L M+ G+ D T S +L+ C + +S + + V +M ++G+
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS--DAVALVDQMVEMGYKPD 187
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+T +I L K +A+ +++QM G +PD+V Y V+NG+ + D A L
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV YN I+GLCK +++ + + M+ G +PDV TY++L+ LC
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I N+ T+S +ID +G ++EA L +E + + + +
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A + + M KD P + L+
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 170/394 (43%), Gaps = 55/394 (13%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLF-- 139
Y I SQ +VL + K +E L+ Y + R D+V L
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 140 -----YKIPKFRI----------NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
YK F N+ A+ +++ M+ G D T +++ +C++ D
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDI--- 241
+ D L +++M+K +V Y +I L K + + DAL + +M + GI+PD+
Sbjct: 239 I--DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 242 --------------------------------VCYTMVLNGVIVQEDYVKAEELFDELLV 269
V ++ +++ + + V+AE+L+DE++
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD++TY+ ING C + ++ M M P+V+TY+TL++ CK + +
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL +EM +G+V N TY+ +I G D A + ++ ++ G+ ++ +
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC+ G + KA+ + + + + P + ++
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 21/349 (6%)
Query: 75 NCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQD 134
C+P Y V+ L + S+L +EK + E I+ +I D
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHMDD 276
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
++NLF + M N G D T S ++S +C S L +
Sbjct: 277 ALNLFTE------------------MDNKGIRPDVFTYSSLISCLCNYGRWSDASRL--L 316
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+M + +V ++ +I + VK+ K+ +A + ++M I PDI Y+ ++NG +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ +A+ +F+ ++ P+V TY+ I G CK VE G+++ M + G + +TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
TL+ + R+ + + + K+M G+ N+ TY+I++DGL G + +A + E
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ ++ I G+C+ G V EL ++ K VSP + ++
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 147/336 (43%), Gaps = 41/336 (12%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D IE++ N P + F LI + + +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN---PNVVTFSALIDAFVKEGKLVE 346
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCS 173
+ L+ ++ K I+ F + +IN GFC+ + T S
Sbjct: 347 AEKLYDEMIKRSIDPDIFT---YSSLIN-GFCMHDRLDEAKHMFELMISKDCFPNVVTYS 402
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ C+ + + +E + +EM + G V YT +I + +A + QM
Sbjct: 403 TLIKGFCKAKRV--EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
S G+ P+I+ Y ++L+G+ KA +F+ L + PD+YTYN+ I G+CK VE
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G ++ + G P+VI YNT++ C+ L+K+MK G + N TY+ +I
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 354 DGLASKGDI---------IEACGLLEEALNKGLCTQ 380
GD + +CG +A GL T
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Query: 203 CF-GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAE 261
CF +V Y+ +I+ K ++V + + + +M G+ + V YT +++G D A+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+F +++ +G+ P++ TYN+ ++GLCK + + + ++ +PD+ TYN +++ +
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
CK ++ EL + KG+ N+ Y+ MI G KG EA LL++ G S
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 382 SMFDETICGLCQRGLVRKALELLKQM 407
++ I + G + EL+K+M
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEM 599
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 110/217 (50%), Gaps = 1/217 (0%)
Query: 208 DYTNVIRS-LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
DY ++R+ L KV DA+ + M P IV + +L+ V + L ++
Sbjct: 49 DYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQ 108
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+ LG+ D+YTY+++IN C+++ + + ++A M +LG +PD++T ++LL C +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 327 LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDE 386
++ LV +M G + T++ +I GL EA L+++ + +G +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 387 TICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+RG + AL LLK+M + ++ ++
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 102/211 (48%), Gaps = 2/211 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
+ RV +E+ M G + T + ++ + RD + +++ ++M +G
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV--FKQMVSVGVHPN 467
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
++ Y ++ L K K+ A+ + ++ ++PDI Y +++ G+ ELF
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
L + G+ P+V YN I+G C++ + E ++ M+E G P+ TYNTL++A +
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
+ EL+KEM+ G + T ++ + L
Sbjct: 588 DREASAELIKEMRSCGFAGDASTIGLVTNML 618
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 148/310 (47%), Gaps = 19/310 (6%)
Query: 131 RFQDSVNLFYKIPKFR-----------------INRVGFAIEILNCMINDGFCVDGKTCS 173
+ D+VNLF + K R +N+ I + M N G + T S
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++++ C + LS L + +M KLG+ +V +++ ++ DA+ ++ QM
Sbjct: 121 ILINCFCRRSQLSL--ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
G +PD + +++G+ +A L D ++V G PD+ TY + +NGLCK+ +++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
+ ++ ME+ +P V+ YNT++ ALC + +N L EM KGI N+ TY+ +I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 354 DGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVS 413
L + G +A LL + + + + F I + G + +A +L +M + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 414 PGARVWEALL 423
P + +L+
Sbjct: 359 PDIFTYSSLI 368
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 174/394 (44%), Gaps = 55/394 (13%)
Query: 82 AYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYK 141
Y +I SQ +VL + K +E L+ + +R D+V+L +
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 142 IPK-----------------FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+ + FR NR A+ +++ M+ G D T ++++ +C++ D
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
+ D L +++M++ G+V Y +I +L + V DAL + +M + GI+P++V Y
Sbjct: 237 I--DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 245 -----------------------------------TMVLNGVIVQEDYVKAEELFDELLV 269
+ +++ + + V+AE+L+DE++
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+ PD++TY+ ING C + ++ M M P+V+TYNTL++ CK + ++
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
EL +EM +G+V N TY+ +I G + A + ++ ++ G+ + +
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GLC G V AL + + + + P + ++
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 32/318 (10%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y+ +I+ L ++ D S +L D IE++ N P + F LI + + +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN---PNVVTFSALIDAFVKEGKLVE 344
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK---------------------TCS 173
+ L+ ++ K I+ F L IN GFC+ + T +
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSL---IN-GFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 174 LILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMK 233
++ C+ + + DE + +EM + G V YT +I + + +A + QM
Sbjct: 401 TLIKGFCKAKRV--DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 234 SDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVE 293
SDG+ PDI+ Y+++L+G+ A +F+ L + PD+YTYN+ I G+CK VE
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 294 AGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMI 353
G + + G KP+V+TY T++ C+ L +EMK +G + + TY+ +I
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 354 DGLASKGDIIEACGLLEE 371
GD + L+ E
Sbjct: 579 RAHLRDGDKAASAELIRE 596
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%)
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
S+ DL D+ + +M K +V+++ ++ ++ K K + + QM++ GI
Sbjct: 53 SINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 112
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
++ Y++++N + A + +++ LG PD+ T N +NG C N + +
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
++ M E+G +PD T+NTL+ L + + LV M KG +L TY I+++GL
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGAR 417
+GDI A LL++ + +++ I LC V AL L +M +K + P
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 418 VWEALL 423
+ +L+
Sbjct: 293 TYNSLI 298
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
DY + + + K+ DA+ + M P IV ++ +L+ + + L +++
Sbjct: 48 DYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 107
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
LG+ ++YTY++ IN C+++ + + ++A M +LG +PD++T N+LL C +
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ LV +M G + T++ +I GL EA L++ + KG +
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+RG + AL LLK+M + PG ++ ++
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPK-----------------FRINRVGFAIEILNCMINDG 164
LIK + A R + + LF ++ + F+ A + M++DG
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
D T S++L +C + + L + +++ + Y +I + K KV D
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVET--ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
+ + G+KP++V YT +++G + +A+ LF E+ G +PD TYN I
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 285 GLCKQNNVEAGIKMIACMEE 304
+ + A ++I M
Sbjct: 580 AHLRDGDKAASAELIREMRS 599
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 116/227 (51%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y I++ VK V L + N+MK D I P + Y ++++G+ + AE+LFDE+L
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
L+P + TYN I+G CK N E K+ M+ +P +IT+NTLL+ L K +
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
++KEMK G V + T+SI+ DG +S A G+ E A++ G+ + +
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNT 435
LC+ G + KA E+L + K + P ++ ++ K D V
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 146/272 (53%), Gaps = 4/272 (1%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS-SDELLGFVQEMKKLGFCFGMVDYTN 211
A+ + ++ G ++ TCS++L+++C++ + ++E+LG +EM K G V Y
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG--REMAK-GLVPNEVIYNT 394
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I +K + A + M+ G+KPD + Y ++ + AE+ +++ + G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P V TYN+ I G ++ + ++ ME+ G+ P+V++Y TL+ LCK +L +
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
+ ++M+ +G+ ++ Y+++IDG SKG I +A +E L KG+ ++ I GL
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + +A +LL +++ K + P + +L+
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
++EMK LGF ++ + EK ALG+ G+K + +++LN +
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
+ KAEE+ + GLVP+ YN I+G C++ ++ I ME+ G KPD +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YN L++ C++ E+ + V +MK KG+ +++TY+I+I G K + + +L+E
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 374 NKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ G + I LC+ + +A + + M D+ VSP R++ L+ SK
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSK 542
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 179/416 (43%), Gaps = 43/416 (10%)
Query: 53 QQQQIPKQPHILSSLLHS-----------FSIYNCEPPPEAYHF---VIKTLAENSQFCD 98
QQ +I +LSSLL S FS ++ P + F ++ L S+
Sbjct: 67 QQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMIS 126
Query: 99 --------------------ISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNL 138
++ +LDH+ K + F +F++++++ F+ S +
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES-----DFRPSKFM 181
Query: 139 FYKI--PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQE 196
+ K +++ VG +E+ N M +D ++++ +C+ + ++ E L E
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL--FDE 239
Query: 197 MKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQED 256
M ++ Y +I K + + +MK+D I+P ++ + +L G+
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 257 YVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNT 316
AE + E+ LG VPD +T+++ +G EA + + + G K + T +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 317 LLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKG 376
LL ALCK ++ + E++ KG+V N Y+ MIDG KGD++ A +E +G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 377 LCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
+ ++ I C+ G + A + + +M K VSP + L+ K +F
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 31/319 (9%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFI-FIDLIKTYADAHRFQDSV 136
P E Y+ +I +F +L +E +N P + + LI + ++
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEME--DNGTMPNVVSYGTLINCLCKGSKLLEA- 513
Query: 137 NLFYKIPKFRINRVGFA--IEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFV 194
+I K + G + + I N +I DG C GK ++ F
Sbjct: 514 ----QIVKRDMEDRGVSPKVRIYNMLI-DGCCSKGKI----------------EDAFRFS 552
Query: 195 QEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
+EM K G +V Y +I L K+ +A +L ++ G+KPD+ Y +++G
Sbjct: 553 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ + L++E+ G+ P + TY++ I+ LC + +E ++ E+ KPD++ Y
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFG---EMSLKPDLLVY 668
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
N +L ++ + L K+M K I L+ TY+ +I G G + E L++E
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNA 728
Query: 375 KGLCTQSSMFDETICGLCQ 393
+ + ++ ++ + G C+
Sbjct: 729 REMEPEADTYNIIVKGHCE 747
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 31/265 (11%)
Query: 194 VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIV 253
V +MK G + Y +I +K + IL +M+ +G P++V Y ++N +
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 254 QEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVIT 313
++A+ + ++ G+ P V YN+ I+G C + +E + M + G + +++T
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 314 YNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEAL 373
YNTL+ L +L+ +L+ E+ KG+ ++ TY+ +I G G++ L EE
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 374 NKG-------------LCTQSSM-FDETICG-----------------LCQRGLVRKALE 402
G LCT+ + E + G G + KA
Sbjct: 627 RSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 403 LLKQMADKDVSPGARVWEALLLSSV 427
L KQM +K + + +L+L +
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQL 711
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+ +EMK+ G + Y +++ SL KE + + +M +KPD++ Y VL+
Sbjct: 619 IALYEEMKRSGIKPTLKTY-HLLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHC 674
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
V D KA L +++ + D TYN I G K + +I M +P+
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGL 356
TYN +++ C+V++ +EM+ KG +L++ + ++ GL
Sbjct: 735 ADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 138/277 (49%), Gaps = 2/277 (0%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+++LN M DG D T + ++S +C S + V M K + + +
Sbjct: 205 ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM--VSCMTKREIYPDVFTFNAL 262
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGL 272
I + VK+ +V +A +M + PDIV Y++++ G+ + +AEE+F ++ G
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 273 VPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRE 332
PDV TY++ ING CK VE G+K+ M + G + +TY L+Q C+ +LN E
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEE 382
Query: 333 LVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLC 392
+ + M + G+ N+ TY++++ GL G I +A +L + G+ ++ I G+C
Sbjct: 383 IFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMC 442
Query: 393 QRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ G V A ++ + + + P + ++L K
Sbjct: 443 KAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 134/273 (49%), Gaps = 4/273 (1%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
TC+++L+ C LS L F+ +M KLG +V + +++ + ++V+DAL + +
Sbjct: 118 TCNILLNCFCRCSQLSL--ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G KP++V Y +++G+ + A +L + + G+ PDV TYN I+GLC
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+M++CM + PDV T+N L+ A K ++ E +EM + + ++ TYS
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
++I GL + EA + ++KG + I G C+ V ++L +M+ +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 411 DVSPGARVWEALL--LSSVSKLDFVNTSFIRLV 441
V + L+ KL+ F R+V
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 140/297 (47%), Gaps = 37/297 (12%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ L MI G T +L+ C + D D L F Q M +G+
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC-RGDRVYDALYMFDQ-MVGMGYKPN 185
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV-------------- 251
+V Y +I L K ++V +AL +LN+M+ DGI PD+V Y +++G+
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 252 --------------------IVQEDYV-KAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
V+E V +AEE ++E++ L PD+ TY++ I GLC +
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
++ +M M G PDV+TY+ L+ CK +++ +L EM +G+V N TY+
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
I+I G G + A + + G+ ++ + GLC G + KAL +L M
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +LS++ + + D ++ ++M+ LG + ++ + ++ AL L +M
Sbjct: 85 SRLLSAISKMKKY--DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G +P IV + +LNG + A +FD+++ +G P+V YN I+GLCK V
Sbjct: 143 IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ + ++ ME+ G PDV+TYN+L+ LC + +V M + I ++ T++ +
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
ID +G + EA EE + + L + I GLC + +A E+ M K
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 413 SPGARVWEALL 423
P + L+
Sbjct: 323 FPDVVTYSILI 333
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 109/235 (46%), Gaps = 6/235 (2%)
Query: 201 GFCFGMVDYTN------VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ 254
GFCF Y+N ++R+ ++ K+ D+L + M P I ++ +L+ +
Sbjct: 35 GFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM 94
Query: 255 EDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITY 314
+ Y L++++ +LG+ ++ T N+ +N C+ + + + + M +LG +P ++T+
Sbjct: 95 KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTF 154
Query: 315 NTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALN 374
+LL C+ + + +M G N+ Y+ +IDGL + A LL
Sbjct: 155 GSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK 214
Query: 375 KGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
G+ ++ I GLC G A ++ M +++ P + AL+ + V +
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 22/286 (7%)
Query: 78 PPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPE-FIFIDLIKTYADAHRFQDSV 136
P Y+ +I L + ++ D + ++ + KRE + P+ F F LI R ++
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY--PDVFTFNALIDACVKEGRVSEAE 276
Query: 137 NLFYKIPKFRIN-----------------RVGFAIEILNCMINDGFCVDGKTCSLILSSV 179
+ ++ + ++ R+ A E+ M++ G D T S++++
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 180 CEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKP 239
C+ + + + + EM + G V YT +I+ + K+ A I +M G+ P
Sbjct: 337 CKSKKV--EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 240 DIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
+I+ Y ++L+G+ KA + ++ G+ D+ TYN+ I G+CK V +
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 300 ACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+ G PD+ TY T++ L K L ++MK GI+ N
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 23/366 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
SL+ S + P Y+ VI L +N + V +EK+ + LI
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK-GIRADAVTYNTLISG 228
Query: 126 YADAHRFQDSVNLFYKIPKFRIN-RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRD 184
+++ R+ D+ L + K +I+ V F +++ + +G ++ E R+
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG-------------NLLEARN 275
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L +EM + + Y ++I + DA + + M S G PD+V Y
Sbjct: 276 L--------YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
++ G + +LF E+ GLV D +TYN I+G C+ + K+ M +
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
G PD++TYN LL LC ++ + +V++++ + +++ TY+I+I GL + E
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLL 424
A L KG+ + + I GLC++GL R+A +L ++M + P R+++ L
Sbjct: 448 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Query: 425 SSVSKL 430
+ L
Sbjct: 508 DHYTSL 513
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 112/236 (47%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D ++ +M+ LG + +T +I + ++ AL +L +M G +P IV +
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
LNG + +A L D + G VP+V YN INGLCK ++ +++ CME+ G
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 215
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+ D +TYNTL+ L L+++M + I N+ ++ +ID +G+++EA
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275
Query: 368 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +E + + + ++ I G C G + A + M K P + L+
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 134/299 (44%), Gaps = 4/299 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + + M N G D + ++++ C R L + +M KLGF
Sbjct: 91 KMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFC--RCSRLSLALALLGKMMKLGFRPS 148
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +++ + + +A+ +++ M G P++V Y V+NG+ D A E+F
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+ G+ D TYN I+GL +++ M + P+VI + L+ K
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
L R L KEM + +V N+ TY+ +I+G G + +A + + ++KG ++
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRLVD 442
I G C+ V ++L +M + + A + L+ KL+ F R+VD
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 133/322 (41%), Gaps = 19/322 (5%)
Query: 119 FIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEIL-NC----------------MI 161
F ++ A ++F + L++K+ I+ ++ IL +C M+
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 162 NDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
GF T +L+ C+ E + V M GF +V Y VI L K
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQ--EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+ +AL + M+ GI+ D V Y +++G+ + A L +++ + P+V +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I+ K+ N+ + M P+V TYN+L+ C L + + M KG
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKAL 401
++ TY+ +I G + + L E +GL + ++ I G CQ G + A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 402 ELLKQMADKDVSPGARVWEALL 423
++ +M D VSP + LL
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILL 401
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +R+ + K DA + +M P IV +T VL + + L+ ++
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
LG+ D+Y++ + I+ C+ + + + ++ M +LG +P ++T +LL C+
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
LV M G V N+ Y+ +I+GL D+ A + KG+ + ++ I
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL G A LL+ M + + P + AL+
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 139/278 (50%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ FA+ IL M+ G+ T + +L+ C +S E + V +M ++G+
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS--EAVALVDQMVEMGYQPD 169
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T ++ L + K +A+ ++ +M G +PD+V Y V+NG+ + + A L +
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV Y+ I+ LCK +V+ + + M+ G +PDV TY++L+ LC
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ L+ +M + I N+ T++ +ID A +G +IEA L +E + + + ++
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C + +A ++ M KD P + L+
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 131/263 (49%), Gaps = 2/263 (0%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTN 211
A+ +LN M D S ++ S+C+ R + D+ L EM G + Y++
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV--DDALNLFTEMDNKGIRPDVFTYSS 280
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
+I L + DA +L+ M I P++V + +++ + ++AE+LFDE++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
+ P++ TYN ING C + ++ ++ M PDV+TYNTL+ CK +++
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
EL ++M +G+V N TY+ +I G D A + ++ ++ G+ ++ + GL
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 392 CQRGLVRKALELLKQMADKDVSP 414
C+ G + KA+ + + + + P
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEP 483
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 132/253 (52%), Gaps = 2/253 (0%)
Query: 171 TCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILN 230
T +++++ +C + LS L + +M KLG+ +V +++ ++ +A+ +++
Sbjct: 102 TYNIMINCLCRRSQLSF--ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 231 QMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQN 290
QM G +PD V +T +++G+ +A L + ++V G PD+ TY INGLCK+
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 291 NVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYS 350
+ + ++ ME+ + DV+ Y+T++ +LCK R ++ L EM KGI ++ TYS
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 351 IMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADK 410
+I L + G +A LL + L + + F+ I + G + +A +L +M +
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 411 DVSPGARVWEALL 423
+ P + +L+
Sbjct: 340 SIDPNIVTYNSLI 352
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +LS++ + + D ++ F ++M+ LG + Y +I L ++ ++ AL IL +M
Sbjct: 69 SKLLSAIAKMKKF--DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM 126
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G P IV +LNG +A L D+++ +G PD T+ ++GL + N
Sbjct: 127 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 186
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M G +PD++TY ++ LCK E + L+ +M+ I ++ YS +
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
ID L + +A L E NKG+ + I LC G A LL M ++ +
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 413 SPGARVWEALL 423
+P + +L+
Sbjct: 307 NPNVVTFNSLI 317
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 143/316 (45%), Gaps = 28/316 (8%)
Query: 77 EPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFI-FIDLIKTYADAHRFQD 134
P Y +I L ++ D S +L D +E++ N P + F LI +A + +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN---PNVVTFNSLIDAFAKEGKLIE 328
Query: 135 SVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGK------TCSLILSSVCEQRDLSSD 188
+ LF ++ + I+ I N +IN GFC+ + +L++S C ++ +
Sbjct: 329 AEKLFDEMIQRSIDP---NIVTYNSLIN-GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 189 ELL-GF------------VQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L+ GF ++M + G V YT +I + +A + QM SD
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G+ P+I+ Y +L+G+ KA +F+ L + PD+YTYN+ G+CK VE G
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
+ + G KPDVI YNT++ CK L +MK G + + TY+ +I
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 356 LASKGDIIEACGLLEE 371
GD + L++E
Sbjct: 565 HLRDGDKAASAELIKE 580
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 2/279 (0%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCF 204
F+ N+ A+ ++ M+ G D T +++ +C++ + D L + +M+K
Sbjct: 181 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE--PDLALNLLNKMEKGKIEA 238
Query: 205 GMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELF 264
+V Y+ VI SL K V DAL + +M + GI+PD+ Y+ +++ + + A L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
++L + P+V T+N I+ K+ + K+ M + P+++TYN+L+ C
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
L+ +++ M K + ++ TY+ +I+G +++ L + +GL + +
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G Q A + KQM V P + LL
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 168/401 (41%), Gaps = 56/401 (13%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+L+ + C+P Y VI L + + ++L+ +EK + E I+ +I +
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYSTVIDS 249
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDL 185
D++NLF + M N G D T S ++S +C
Sbjct: 250 LCKYRHVDDALNLFTE------------------MDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 186 SSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYT 245
S L + +M + +V + ++I + K+ K+ +A + ++M I P+IV Y
Sbjct: 292 SDASRL--LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 246 MVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEEL 305
++NG + + +A+++F ++ +PDV TYN ING CK V G+++ M
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 306 G-----------------------------------SKPDVITYNTLLQALCKVRELNRL 330
G P+++TYNTLL LCK +L +
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
+ + ++ + ++ TY+IM +G+ G + + L KG+ ++ I G
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLD 431
C++GL +A L +M + P + + L+ + + D
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A+ +++ M+ G+ D T + ++ + + S E + V+ M G +V
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS--EAVALVERMVVKGCQPDLV 206
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y VI L K+ + AL +LN+M+ I+ D+V Y+ V++ + A LF E+
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ PDV+TY+ I+ LC ++++ M E P+V+T+N+L+ A K +L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+L EM + I N+ TY+ +I+G + EA + ++K ++
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ V +EL + M+ + + + L+
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 114/239 (47%)
Query: 185 LSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCY 244
L DE + EM K +V+++ ++ ++ K +K + +M+ G+ ++ Y
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 245 TMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEE 304
+++N + + A + +++ LG P + T N +NG C N + + ++ M E
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 305 LGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIE 364
+G +PD +T+ TL+ L + + + LV+ M KG +L TY +I+GL +G+
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 365 ACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
A LL + + ++ I LC+ V AL L +M +K + P + +L+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 20/290 (6%)
Query: 149 RVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVD 208
RV A E+ + F VD T ++IL+ C + + + L ++EM + G +
Sbjct: 176 RVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIK--RTPKALEVLKEMVERGINPNLTT 232
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +++ + ++ A +MK + D+V YT V++G V + +A +FDE++
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
G++P V TYN I LCK++NVE + M M G +P+V TYN L++ L E +
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS-SMFDET 387
R EL++ M+ +G N QTY++MI + ++ +A GL E+ + G C + ++
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK-MGSGDCLPNLDTYNIL 411
Query: 388 ICGLCQRGLVRK-------ALELLKQMADKDVSPGA----RVWEALLLSS 426
I G+ VRK A +LL +M ++ P RV LLL+
Sbjct: 412 ISGM----FVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTG 457
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 1/196 (0%)
Query: 228 ILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLC 287
++++M+S I P + +V KA +LF + G D+ ++N ++ LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 288 KQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
K VE ++ + S D +TYN +L C ++ + E++KEM +GI NL
Sbjct: 173 KSKRVEKAYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+ M+ G G I A E + + + G G +++A + +M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 408 ADKDVSPGARVWEALL 423
+ V P + A++
Sbjct: 292 IREGVLPSVATYNAMI 307
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 153 AIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNV 212
A+ + M+ G+ + T ++++ + + S E L +Q M+ G Y +
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEEL--MQRMENEGCEPNFQTYNMM 376
Query: 213 IRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQ---EDYVKAEELFDELLV 269
IR + +V ALG+ +M S P++ Y ++++G+ V+ ED V A +L E++
Sbjct: 377 IRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVE 436
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSK 308
G +P +T+N +NGL N +++ + GS+
Sbjct: 437 RGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSGSR 475
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 201/479 (41%), Gaps = 69/479 (14%)
Query: 2 VRSSALKRANLHLRKHRKWPLSPYKAK-WHQTLDQQQAKQNVK----------QSLTTPP 50
+ S A K NL L + + P+ ++ W +T +++ N++ QS P
Sbjct: 9 IASKANKFLNLCLLQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPS 68
Query: 51 ----TKQQQQIPKQPH--ILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLD 104
+K +I K + ++ SL H + +Y+ VI L S+F SV+
Sbjct: 69 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 128
Query: 105 HIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKF-----------------RI 147
+ K +E LI + +R D+++L K+ + +I
Sbjct: 129 KMMKF-GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
V A+E+ + M DG D T + +++ +C S L +++M ++
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL--MRDMVMRDIVPNVI 245
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+T VI VK+ K +A+ + +M + PD+ Y ++NG+ + +A+++ D +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG--------------------- 306
+ G +PDV TYN ING CK V+ G K+ M + G
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 307 -----------SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
S+P++ TY+ LL LC + + L + M+ I L++ TY+I+I G
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 356 LASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+ G++ +A L KGL + I G C++ K+ L ++M + + P
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 154/328 (46%), Gaps = 12/328 (3%)
Query: 98 DISSVLDHIEKRENFETPEFIF--IDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE 155
D S VL I K +N++ +F +++ D + + +N + +F I A+
Sbjct: 71 DFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVI-----ALS 125
Query: 156 ILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRS 215
++ M+ G+ D T S +++ C+ + + + V +M+++GF +V Y +I
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVF--DAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 216 LVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPD 275
K V DA+ + ++M+ DG++ D V Y ++ G+ + A L ++++ +VP+
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
V T+ I+ K+ +K+ M PDV TYN+L+ LC ++ ++++
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M KG + ++ TY+ +I+G + E L E +GL + ++ I G Q G
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
A E+ +M D P R + LL
Sbjct: 364 RPDAAQEIFSRM---DSRPNIRTYSILL 388
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 111/218 (50%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+VD++ V+ + K + + + + M+ GI D+ Y +V+N + +V A +
Sbjct: 69 IVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 128
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
+++ G PDV T + ING C+ N V I +++ MEE+G +PDV+ YNT++ CK+
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+N EL M+ G+ + TY+ ++ GL G +A L+ + + + + F
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + G +A++L ++M + V P + +L+
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%)
Query: 239 PDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKM 298
P IV ++ VL+ + ++Y LF + V G+ D+Y+YN+ IN LC+ + + +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 299 IACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLAS 358
+ M + G +PDV+T ++L+ C+ + +LV +M+ G ++ Y+ +IDG
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 359 KGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARV 418
G + +A L + G+ + ++ + GLC G A L++ M +D+ P
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 419 WEALL 423
+ A++
Sbjct: 247 FTAVI 251
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%)
Query: 262 ELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQAL 321
+LF +++ +P + ++ ++ + K N + I + ME G D+ +YN ++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ +V +M G ++ T S +I+G + +A L+ + G
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+++ I G C+ GLV A+EL +M V A + +L+
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 30/306 (9%)
Query: 152 FAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQ----EMKKLGFCFGMV 207
+A ++L M+ G ++++ S+C +D + +LL + EM G +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
+ ++ R L K A ++ +M G PD Y+ VLN + A LF+E+
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GLV DVYTY + ++ CK +E K M E+G P+V+TY L+ A K +++
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK------------ 375
+ EL + M +G + N+ TYS +IDG G + +AC + E
Sbjct: 570 SYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 376 --------GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL--LS 425
+ T ++ D G C+ V +A +LL M+ + P V++AL+ L
Sbjct: 630 YDDNSERPNVVTYGALLD----GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 426 SVSKLD 431
V KLD
Sbjct: 686 KVGKLD 691
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 6/248 (2%)
Query: 163 DGFCVDG---KTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
DG C G K C I +C +D+ ++ + ++ +V Y ++ K
Sbjct: 596 DGHCKAGQVEKACQ-IFERMCGSKDVPDVDM--YFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
+V +A +L+ M +G +P+ + Y +++G+ +A+E+ E+ G +YTY
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+ K + K+++ M E P+V+ Y ++ LCKV + + +L++ M+
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
KG N+ TY+ MIDG G I LLE +KG+ + I C+ G +
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Query: 400 ALELLKQM 407
A LL++M
Sbjct: 833 AHNLLEEM 840
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +I L K K+ +A + +M G + Y+ +++ + A ++ ++L
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
P+V Y I+GLCK + K++ MEE G +P+V+TY ++ + ++
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL++ M KG+ N TY ++ID G + A LLEE T ++ + + I
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
G + + ++L LL ++ D +P V+ L+
Sbjct: 857 EGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLI 889
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%)
Query: 229 LNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCK 288
Q + +P++V Y +L+G +A +L D + + G P+ Y+ I+GLCK
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 289 QNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQT 348
++ ++ M E G + TY++L+ KV+ + +++ +M N+
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 349 YSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMA 408
Y+ MIDGL G EA L++ KG + I G G + LELL++M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 409 DKDVSPGARVWEALL 423
K V+P + L+
Sbjct: 807 SKGVAPNYVTYRVLI 821
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 95/207 (45%), Gaps = 6/207 (2%)
Query: 207 VDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDE 266
V YT +I L + +A+ LN+M++ P++V Y+ +L G + ++ + + + +
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM 362
Query: 267 LLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRE 326
+++ G P +N ++ C + K++ M + G P + YN L+ ++C ++
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 327 ------LNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQ 380
L+ + EM G+VLN S L S G +A ++ E + +G
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 381 SSMFDETICGLCQRGLVRKALELLKQM 407
+S + + + LC + A L ++M
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEM 509
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 3/219 (1%)
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYIN 284
AL L ++K +P Y ++ + + A + E+ + L D +T +
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 285 GLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL 344
LCK + ++ E PD + Y L+ LC+ + + M+ +
Sbjct: 279 SLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 345 NLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
N+ TYS ++ G +K + +L + +G +F+ + C G A +LL
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 405 KQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQ 443
K+M PG V+ L+ S D +N + L ++
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 133/343 (38%), Gaps = 31/343 (9%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
LL + S+ CEP Y +I L + + + V + + F + + LI Y
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH-GFPATLYTYSSLIDRY 719
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
R QD + + K N + I MI DG C GKT
Sbjct: 720 FKVKR-QDLASKV--LSKMLENSCAPNVVIYTEMI-DGLCKVGKT--------------- 760
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE +Q M++ G +V YT +I K+ L +L +M S G+ P+ V Y +
Sbjct: 761 -DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++ A L +E+ Y I G K+ I+ + ++E+G
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEF-----IESLGLLDEIG 874
Query: 307 ---SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVL--NLQTYSIMIDGLASKGD 361
+ P + Y L+ L K + L L++E+ L TY+ +I+ L
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 362 IIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELL 404
+ A L E KG+ + F I GL + + +AL LL
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 160/373 (42%), Gaps = 38/373 (10%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHI------------------EKRENFETPEFIFIDL 122
E + V+ TL +N +F S+L + RE TP +F L
Sbjct: 116 ETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPR-VFDSL 174
Query: 123 IKTYADAHRFQDSVNLFYKIPKFRI-----------------NRVGFAIEILNCMINDGF 165
KT+A +F+++ + F ++ + RV A+ M
Sbjct: 175 FKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKI 234
Query: 166 CVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA 225
+ T ++++S C L D+ + +Q+M++LGF V Y +I +K + A
Sbjct: 235 SPNPYTLNMVMSGYCRSGKL--DKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
L + N M G++P++V + +++G +A ++F E+ + + P+ TYN ING
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+Q + E + M G + D++TYN L+ LCK + + + VKE+ + +V N
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
T+S +I G + + L + + G F+ + C+ A ++L+
Sbjct: 413 SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Query: 406 QMADKDVSPGARV 418
+M + + +R
Sbjct: 473 EMVRRSIPLDSRT 485
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 5/306 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++ + GFA +L M+ GF + +++L +C R+L + + ++EM++
Sbjct: 119 QMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC--RNLECGKAVSLLREMRRNSLMPD 176
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+ Y VIR + +++ AL + N+MK G +V + ++++ +A
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ +GL D+ Y I G C ++ G + + E G P ITYNTL++ CK+
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+L E+ + M +G+ N+ TY+ +IDGL G EA LL + K + ++
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTS---FIRLVD 442
I LC+ GLV A+E+++ M + P + LL +K D S ++ L D
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 443 QILNTP 448
P
Sbjct: 417 SSYTDP 422
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 112/231 (48%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F ++M + V + ++ V+ K A G+L M G ++ + ++L G+
Sbjct: 94 FYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC 153
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
+ KA L E+ L+PDV++YN I G C+ +E +++ M+ G ++
Sbjct: 154 RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+ L+ A CK +++ +KEMK+ G+ +L Y+ +I G G++ L +E
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
L +G + ++ I G C+ G +++A E+ + M ++ V P + L+
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%)
Query: 150 VGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDY 209
V A+EI+ M D T +++L +C + DL L ++ ++ Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 210 TNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+I L K+ ++ AL I + + D V ++LN + D KA EL+ ++
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNR 329
+V + TY I+G CK + ++ M +P V YN LL +LCK L++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 330 LRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETIC 389
L +EM+ ++ +++IMIDG GDI A LL GL + + I
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 390 GLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+ G + +A+ +M D P A + +++L +S+
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
DY ++ SL K+ + A + +M+ D PD+V + ++++G + D AE L +
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
GL PD++TY+ IN K ++ I M + G +PD +++L+ E
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMID 354
++L ELVK++ K IVL+ + ++D
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMD 677
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 114/265 (43%), Gaps = 37/265 (13%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A++I + ++ D T +++L+S + D+ ++ + +++
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV--NKAMELWKQISDSKIVRNSD 495
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
YT +I K + A G+L +M+ ++P + Y +L+ + + +A LF+E+
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
PDV ++N+ I+G K ++++ ++ M G PD+ TY+ L +
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL---------I 606
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
NR +L G + EA ++ ++ G + + D
Sbjct: 607 NRFLKL--------------------------GYLDEAISFFDKMVDSGFEPDAHICDSV 640
Query: 388 ICGLCQRGLVRKALELLKQMADKDV 412
+ +G K EL+K++ DKD+
Sbjct: 641 LKYCISQGETDKLTELVKKLVDKDI 665
Score = 38.9 bits (89), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 60/148 (40%)
Query: 276 VYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVK 335
+ N + L + N E M E + + ++ + LL+ ++R+ ++
Sbjct: 72 AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131
Query: 336 EMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRG 395
M +G N+ ++I++ GL + +A LL E L ++ I G C+
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 396 LVRKALELLKQMADKDVSPGARVWEALL 423
+ KALEL +M S W L+
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILI 219
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 132/251 (52%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S ++ S+C+ R D+ L EM+ G ++ Y+++I L + DA +L+ M
Sbjct: 257 STVIDSLCKYR--HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
I P++V ++ +++ + + VKAE+L++E++ + P+++TY+ ING C + +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+M+ M P+V+TYNTL+ CK + +++ EL +EM +G+V N TY+ +
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G D A + ++ ++ G+ ++ + GLC+ G + KA+ + + + +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 413 SPGARVWEALL 423
P + ++
Sbjct: 495 EPDIYTYNIMI 505
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 120/228 (52%)
Query: 196 EMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQE 255
+M KLG+ +V +++ ++ DA+ +++QM G KPD V +T +++G+ +
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 256 DYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN 315
+A L D ++ G PD+ TY +NGLCK+ + + + ++ ME + +V+ Y+
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 316 TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNK 375
T++ +LCK R + L EM+ KG+ N+ TYS +I L + G +A LL + + +
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 376 GLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ F I ++G + KA +L ++M + + P + +L+
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 131/264 (49%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M+ G+ D T + +L+ C +S + + V +M ++G+ V +T +I L
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRIS--DAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K +A+ ++++M G +PD+V Y V+NG+ + D A L +++ + +V Y
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ I+ LCK + + + + ME G +P+VITY++L+ LC + L+ +M
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ I NL T+S +ID KG +++A L EE + + + + I G C + +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
A ++L+ M KD P + L+
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLI 400
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 152/324 (46%), Gaps = 29/324 (8%)
Query: 76 CEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRE--NFETPEFIFIDLIKTYADAHRFQ 133
C+P Y V+ L + D L+ + K E E I+ +I +
Sbjct: 214 CQPDLVTYGAVVNGLCKRG---DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 134 DSVNLFYKIPK--FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELL 191
D++NLF ++ R N + ++ +++C+ N G D S +LS + E R ++ +
Sbjct: 271 DALNLFTEMENKGVRPNVITYS-SLISCLCNYGRWSDA---SRLLSDMIE-RKINPN--- 322
Query: 192 GFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGV 251
+V ++ +I + VKK K+ A + +M I P+I Y+ ++NG
Sbjct: 323 --------------LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 252 IVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDV 311
+ + +A+++ + ++ +P+V TYN ING CK V+ G+++ M + G +
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 312 ITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEE 371
+TY TL+ + R+ + + + K+M G+ N+ TY+I++DGL G + +A + E
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 372 ALNKGLCTQSSMFDETICGLCQRG 395
+ ++ I G+C+ G
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 2/257 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +LS++ + D ++ F ++M+ LG + Y +I + ++ AL +L +M
Sbjct: 82 SKLLSAIAKMNKF--DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM 139
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G +PDIV +LNG A L D+++ +G PD T+ I+GL N
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 199
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ +I M + G +PD++TY ++ LCK + + L+ +M+ I N+ YS +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
ID L +A L E NKG+ + I LC G A LL M ++ +
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 413 SPGARVWEALLLSSVSK 429
+P + AL+ + V K
Sbjct: 320 NPNLVTFSALIDAFVKK 336
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 134/276 (48%), Gaps = 2/276 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
NR+ A+ +++ M+ G+ D T + ++ + S E + + M + G +V
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS--EAVALIDRMVQRGCQPDLV 219
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y V+ L K+ AL +LN+M++ I+ ++V Y+ V++ + A LF E+
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
G+ P+V TY+ I+ LC ++++ M E P+++T++ L+ A K +L
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ +L +EM + I N+ TYS +I+G + EA +LE + K ++
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I G C+ V K +EL ++M+ + + + L+
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 105/216 (48%)
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
DY V+R+ + ++ DA+G+ M P I+ ++ +L+ + + +++
Sbjct: 45 DYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM 104
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+LG+ ++YTYN+ IN C+ + + + ++ M +LG +PD++T N+LL C +
Sbjct: 105 EILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRI 164
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ LV +M G + T++ +I GL EA L++ + +G +
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 388 ICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ GLC+RG AL LL +M + ++ ++
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 93 NSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDS--VNLFYKIPKFRINRV 150
N S+++D K+ E ++ ++IK D + F S +N F ++R+
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF-----CMLDRL 374
Query: 151 GFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYT 210
G A ++L MI + T + +++ C+ + + D+ + +EM + G V YT
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV--DKGMELFREMSQRGLVGNTVTYT 432
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
+I + +A + QM S G+ P+I+ Y ++L+G+ KA +F+ L
Sbjct: 433 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 492
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAG 295
+ PD+YTYN+ I G+CK + G
Sbjct: 493 TMEPDIYTYNIMIEGMCKAGKWKMG 517
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 149/354 (42%), Gaps = 54/354 (15%)
Query: 122 LIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIE-ILNCMINDG---------------- 164
LI+ Y QDS+ +F + + N + IL ++ G
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188
Query: 165 FCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFD 224
C D T +++++ +C + L +Q+M+K G+ +V Y V+ KK +
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYL--MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246
Query: 225 ALGILNQMKSDGIKPDIVCYTMVLN----------GVIVQEDYVK--------------- 259
A+ +L+ MKS G+ D+ Y M+++ G ++ D K
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 306
Query: 260 ----------AEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKP 309
A +L +E+L GL P+ T+N I+G + N + +KM ME G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 310 DVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLL 369
++Y LL LCK E + R MK G+ + TY+ MIDGL G + EA LL
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 370 EEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E G+ + I G C+ G + A E++ ++ +SP ++ L+
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
++L +C+ + D GF MK+ G C G + YT +I L K + +A+ +LN+M
Sbjct: 372 GVLLDGLCKNAEF--DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
DGI PDIV Y+ ++NG + A+E+ + +GL P+ Y+ I C+ +
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ I++ M G D T+N L+ +LCK ++ E ++ M GI+ N ++ +
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I+G + G+ ++A + +E G + + GLC+ G +R+A + LK +
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 413 SPGARVWEALL 423
+ ++ LL
Sbjct: 610 AVDTVMYNTLL 620
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 150/355 (42%), Gaps = 44/355 (12%)
Query: 128 DAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSS 187
D + +N F K+ +F+ A EI+ + G +G S ++ + C L
Sbjct: 437 DIVTYSALINGFCKVGRFKT-----AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK- 490
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
E + + M G + ++ SL K KV +A + M SDGI P+ V + +
Sbjct: 491 -EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
+NG + +KA +FDE+ +G P +TY + GLCK ++ K + + + +
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
D + YNTLL A+CK L + L EM + I+ + TY+ +I GL KG + A
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 368 LLEEALNKG---------LCTQSSMF---------------------------DETICGL 391
+EA +G C MF + I G
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDFVNTSFIRLVDQILN 446
+ G + K +LL +M +++ P + +LL SK V+TSF+ ILN
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYN-ILLHGYSKRKDVSTSFLLYRSIILN 783
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 116/231 (50%), Gaps = 2/231 (0%)
Query: 212 VIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLG 271
++ S+VK + L +M I PD+ + +++N + + + K+ L ++ G
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG 223
Query: 272 LVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLR 331
P + TYN ++ CK+ +A I+++ M+ G DV TYN L+ LC+ + +
Sbjct: 224 YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283
Query: 332 ELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGL 391
L+++M+ + I N TY+ +I+G +++G ++ A LL E L+ GL F+ I G
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 392 CQRGLVRKALELLKQMADKDVSPGARVWEALL--LSSVSKLDFVNTSFIRL 440
G ++AL++ M K ++P + LL L ++ D ++R+
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 38/343 (11%)
Query: 116 EFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLI 175
F+F L+ TY + ++ ++ R + ++EI M GF TC+ I
Sbjct: 106 SFVFGALMTTYRLCNSNPSVYDILIRV-YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAI 164
Query: 176 LSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSD 235
L SV + + S + F++EM K C + + +I L + + ++ +M+
Sbjct: 165 LGSVVKSGEDVS--VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 222
Query: 236 GIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAG 295
G P IV Y VL+ + + A EL D + G+ DV TYN+ I+ LC+ N + G
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG 282
Query: 296 IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDG 355
++ M + P+ +TYNTL+ ++ +L+ EM G+ N T++ +IDG
Sbjct: 283 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG 342
Query: 356 LASKGDIIEAC------------------GLLEEALNK-----------------GLCTQ 380
S+G+ EA G+L + L K G+C
Sbjct: 343 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 402
Query: 381 SSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I GLC+ G + +A+ LL +M+ + P + AL+
Sbjct: 403 RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELL 268
Y +IR +++ + D+L I M G P + +L V+ + V E+L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 269 VLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELN 328
+ PDV T+N+ IN LC + + E ++ ME+ G P ++TYNT+L CK
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 329 RLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETI 388
EL+ MK KG+ ++ TY+++I L I + LL + + + ++ I
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 389 CGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSKLDF 432
G G V A +LL +M +SP + AL+ +S+ +F
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 37/311 (11%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
R AIE+L+ M + G D T ++++ +C ++ LL +++M+K V
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL--LRDMRKRMIHPNEV 299
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
Y +I + KV A +LN+M S G+ P+ V + +++G I + ++ +A ++F +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 268 LVLGLVPDVYTYNVYINGLCK---------------QNNVEAG----------------- 295
GL P +Y V ++GLCK +N V G
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 296 ---IKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M + G PD++TY+ L+ CKV +E+V + G+ N YS +
Sbjct: 420 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 479
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
I G + EA + E + +G F+ + LC+ G V +A E ++ M +
Sbjct: 480 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 413 SPGARVWEALL 423
P ++ L+
Sbjct: 540 LPNTVSFDCLI 550
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%), Gaps = 1/237 (0%)
Query: 193 FVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVI 252
F ++M LG +V +I + K+ +L +M + P++ Y ++L+G
Sbjct: 706 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 765
Query: 253 VQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVI 312
++D + L+ +++ G++PD T + + G+C+ N +E G+K++ G + D
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 825
Query: 313 TYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEA 372
T+N L+ C E+N +LVK M GI L+ T M+ L E+ +L E
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885
Query: 373 LNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSVSK 429
+G+ +S + I GLC+ G ++ A + ++M + P V E+ ++ +++K
Sbjct: 886 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP-PNVAESAMVRALAK 941
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 42/305 (13%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGF--VQEMKKLGFC 203
+ +V A E + CM +DG + + +++ S + L F EM K+G
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN----SGEGLKAFSVFDEMTKVGHH 575
Query: 204 FGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEEL 263
Y ++++ L K + +A L + + D V Y +L + + KA L
Sbjct: 576 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 635
Query: 264 FDELLVLGLVPDVYTYNVYINGLCKQNNV------------------------------- 292
F E++ ++PD YTY I+GLC++
Sbjct: 636 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695
Query: 293 -----EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQ 347
+AGI M+ LG PD++T N ++ ++ ++ + +L+ EM + NL
Sbjct: 696 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 755
Query: 348 TYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQM 407
TY+I++ G + + D+ + L + G+ + G+C+ ++ L++LK
Sbjct: 756 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 815
Query: 408 ADKDV 412
+ V
Sbjct: 816 ICRGV 820
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 148 NRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMV 207
N + ++IL I G VD T ++++S C ++ + V+ M LG
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI--NWAFDLVKVMTSLGISLDKD 860
Query: 208 DYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDEL 267
++ L + + ++ +L++M GI P+ Y ++NG+ D A + +E+
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 920
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+ + P + + L K + ++ M ++ P + ++ TL+ CK +
Sbjct: 921 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 980
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
EL M G+ L+L +Y+++I GL +KGD+ A L EE G ++ +
Sbjct: 981 IEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040
Query: 388 ICGLCQR 394
I GL R
Sbjct: 1041 IRGLLAR 1047
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 110/248 (44%), Gaps = 3/248 (1%)
Query: 167 VDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDAL 226
VD + +L+++C+ +L+ + + EM + YT++I L +K K A+
Sbjct: 611 VDTVMYNTLLTAMCKSGNLA--KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 227 GILNQMKSDG-IKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ ++ G + P+ V YT ++G+ + +++ LG PD+ T N I+G
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
+ +E ++ M P++ TYN LL K ++++ L + + GI+ +
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
T ++ G+ + +L+ + +G+ F+ I C G + A +L+K
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 406 QMADKDVS 413
M +S
Sbjct: 849 VMTSLGIS 856
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 2/219 (0%)
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPD-IVCYTMVLNGVIVQEDYVKAEELF 264
+ Y ++ K++ V + + + +GI PD + C+++VL G+ ++
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVL-GICESNMLEIGLKIL 812
Query: 265 DELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKV 324
+ G+ D YT+N+ I+ C + ++ M LG D T + ++ L +
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 325 RELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
R ++ EM +GI + Y +I+GL GDI A + EE + +C +
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ L + G +A LL+ M + P + L+
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
+DE ++ M K+ + +T ++ K V +AL + M + G+K D+V Y +
Sbjct: 945 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMI 299
++ G+ + D A EL++E+ G + + TY I GL + +G +I
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1057
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 123/232 (53%), Gaps = 2/232 (0%)
Query: 175 ILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKS 234
++ C+ R+L + L FV M K G + Y +I K + +A+G+L++M+S
Sbjct: 310 LVDGFCKARELVTARSL-FVH-MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 235 DGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEA 294
+ PD+ YT+++NG+ +++ +A LF ++ + P TYN I+G CK+ N+E
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 295 GIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
+ + + M G +P++IT++TL+ C VR++ L EM KGIV ++ TY+ +ID
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
+ ++ EA L + L G+ F + G + G + A++ ++
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 115/249 (46%), Gaps = 37/249 (14%)
Query: 211 NVIRSLVKKEKVFDALGILNQ-MKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLV 269
+++ LV++ + FD++ + Q M S G+ PD+ Y ++ Q Y K E+L DE+
Sbjct: 169 SILNGLVRRRR-FDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS 227
Query: 270 LGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYN-------------- 315
LG+ P+VY Y +YI LC+ N +E KM M++ G P++ TY+
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 316 ---------------------TLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMID 354
TL+ CK REL R L M G+ NL Y+ +I
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 355 GLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
G G+++EA GLL E + L + I GLC V +A L ++M ++ + P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 415 GARVWEALL 423
+ + +L+
Sbjct: 408 SSATYNSLI 416
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
RD +E + MKK G + Y+ +I K V A G+ ++ + P++V
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
+ +++G + V A LF ++ G+ P++Y YN I+G CK N+ + +++ M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 303 EELGSKPDVITYNTLLQALC---KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASK 359
E L PDV TY L+ LC +V E NR L ++MK + I + TY+ +I G +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANR---LFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
++ +A L E G+ F I G C ++ A+ L +M K + P +
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 420 EALL 423
AL+
Sbjct: 483 TALI 486
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 20/297 (6%)
Query: 118 IFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILS 177
+F L+ + A + +LF + KF ++ + + NC+I+ G C G
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDP---NLYVYNCLIH-GHCKSGNML----- 356
Query: 178 SVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGI 237
E +G + EM+ L + YT +I L +++V +A + +MK++ I
Sbjct: 357 -----------EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 238 KPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK 297
P Y +++G + + +A +L E+ G+ P++ T++ I+G C +++A +
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 298 MIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLA 357
+ M G PDV+TY L+ A K + L +M GI N T++ ++DG
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525
Query: 358 SKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSP 414
+G + A +E + C F I GLCQ G + +A M ++P
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
MI+ G D ++ +Q S E L + EM LG + YT I L +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL--LDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
K+ +A + MK G+ P++ Y+ +++G + +A L+ E+LV L+P+V +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
++G CK + + M + G P++ YN L+ CK + L+ EM+
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 340 KGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRK 399
+ ++ TY+I+I+GL + + EA L ++ N+ + S+ ++ I G C+ + +
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 400 ALELLKQMADKDVSPGARVWEALL 423
AL+L +M V P + L+
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLI 451
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 2/278 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R N++ A ++ M G + T S ++ C+ ++ + G +E+
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVR--QAYGLYKEILVAELLPN 303
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V + ++ K ++ A + M G+ P++ Y +++G + ++A L
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
E+ L L PDV+TY + INGLC ++ V ++ M+ P TYN+L+ CK
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
+ + +L EM G+ N+ T+S +IDG + DI A GL E KG+ +
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 386 ETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
I + +++AL L M + + P + L+
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 5/237 (2%)
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
S L +++++ F G+ ++ +I ++ +AL + +MK PD
Sbjct: 115 SHRLFNALEDIQSPKFSIGV--FSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLS 169
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+LNG++ + + + ++ GLVPDV+ Y V KQ K++ M LG
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEAC 366
KP+V Y + LC+ ++ ++ + MK G++ NL TYS MIDG G++ +A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 367 GLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
GL +E L L +F + G C+ + A L M V P V+ L+
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLI 346
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 168/362 (46%), Gaps = 25/362 (6%)
Query: 66 SLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKT 125
+L+ + C+P Y VI L + + ++L+ +EK + E I+ +I
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYNTIIDG 259
Query: 126 YADAHRFQDSVNLFYKIPKFRINRVGFAIE-ILNCMINDGFCVDGKTCSLILSSVCEQRD 184
D+ +LF K+ I F +++C+ N G D S +LS + E ++
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA---SRLLSDMLE-KN 315
Query: 185 LSSDELL------GFVQE------------MKKLGFCF-GMVDYTNVIRSLVKKEKVFDA 225
++ D + FV+E M K CF +V Y +I+ K ++V +
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 226 LGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYING 285
+ + +M G+ + V YT +++G D A+ +F +++ G+ PD+ TYN+ ++G
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 286 LCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLN 345
LC NVE + + M++ K D++TY T+++ALCK ++ +L + KG+ N
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 346 LQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLK 405
+ TY+ M+ G KG EA L E G S ++ I + G + EL+K
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIK 555
Query: 406 QM 407
+M
Sbjct: 556 EM 557
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 3/279 (1%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
R +++ A+ IL M+ G+ T + +L+ C +S E + V +M ++G+
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS--EAVALVDQMVEMGYQPD 179
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
V +T ++ L + K +A+ ++ +M G +PD+V Y V+NG+ + + A L +
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 239
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++ + DV YN I+GLCK +++ + ME G KPDV TYN L+ LC
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSM-F 384
+ L+ +M K I +L ++ +ID +G ++EA L +E + C + +
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 385 DETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ I G C+ V + +E+ ++M+ + + + L+
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 134/262 (51%), Gaps = 2/262 (0%)
Query: 146 RINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFG 205
++N+ I + M N G + T S+ ++ C + LS L + +M KLG+
Sbjct: 87 KMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSL--ALAILGKMMKLGYGPS 144
Query: 206 MVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFD 265
+V +++ ++ +A+ +++QM G +PD V +T +++G+ +A L +
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 266 ELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVR 325
++V G PD+ TY INGLCK+ + + ++ ME+ + DV+ YNT++ LCK +
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 326 ELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFD 385
++ +L +M+ KGI ++ TY+ +I L + G +A LL + L K + F+
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 386 ETICGLCQRGLVRKALELLKQM 407
I + G + +A +L +M
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEM 346
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 173 SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQM 232
S +LS++ + D ++ ++M+ LG + Y+ I ++ ++ AL IL +M
Sbjct: 79 SKLLSAIAKMNKF--DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKM 136
Query: 233 KSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNV 292
G P IV +LNG +A L D+++ +G PD T+ ++GL + N
Sbjct: 137 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 293 EAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIM 352
+ ++ M G +PD++TY ++ LCK E + L+ +M+ I ++ Y+ +
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 353 IDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDV 412
IDGL + +A L + KG+ ++ I LC G A LL M +K++
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 413 SPGARVWEALLLSSVSKLDFVNTSFIRLVDQILNT 447
+P + AL+ + V + V +L D+++ +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAE--KLYDEMVKS 349
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 117/241 (48%)
Query: 183 RDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIV 242
+DL D+ +G +M K +V+++ ++ ++ K K + + QM++ GI ++
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 243 CYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACM 302
Y++ +N + A + +++ LG P + T N +NG C N + + ++ M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 303 EELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDI 362
E+G +PD +T+ TL+ L + + + LV+ M KG +L TY +I+GL +G+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 363 IEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEAL 422
A LL + + +++ I GLC+ + A +L +M K + P + L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 423 L 423
+
Sbjct: 292 I 292
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 145/343 (42%), Gaps = 21/343 (6%)
Query: 60 QPHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIF 119
+P + +LL+ E Y+ +I L + D + + +E + + F +
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTY 288
Query: 120 IDLIKTYADAHRFQDSVNLFYKIPKFRIN-RVGFAIEILNCMINDGFCVDG--------- 169
LI + R+ D+ L + + IN + F +++ + +G V+
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 170 -KTC-------SLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEK 221
K C + ++ C+ + + +E + +EM + G V YT +I +
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRV--EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 222 VFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNV 281
+A + QM SDG+ PDI+ Y ++L+G+ + A +F+ + + D+ TY
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 282 YINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKG 341
I LCK VE G + + G KP+V+TY T++ C+ L EMK G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 342 IVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMF 384
+ N TY+ +I GD + L++E + G +S F
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%)
Query: 211 NVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVL 270
N+ R +++ K+ DA+G+ M P IV ++ +L+ + + L +++ L
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 271 GLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRL 330
G+ ++YTY+++IN C+++ + + ++ M +LG P ++T N+LL C ++
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 331 RELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICG 390
LV +M G + T++ ++ GL EA L+E + KG + I G
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 391 LCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
LC+RG AL LL +M + ++ ++
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 134/313 (42%), Gaps = 31/313 (9%)
Query: 70 SFSIYN------CEPPPEAYHFVIKTLAENSQFCDISSVL-DHIEKRENFETPEFIFID- 121
+F ++N +P Y+ +I L ++ D S +L D +EK N P+ +F +
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN---PDLVFFNA 325
Query: 122 LIKTYA-----------------DAHRFQDSVNLFYKIPKF-RINRVGFAIEILNCMIND 163
LI + H F D V I F + RV +E+ M
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 164 GFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVF 223
G + T + ++ + RD + +++ ++M G ++ Y ++ L V
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMV--FKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 224 DALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYI 283
AL + M+ +K DIV YT ++ + +LF L + G+ P+V TY +
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 284 NGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIV 343
+G C++ E + M+E G P+ TYNTL++A + + EL+KEM+ G
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA 563
Query: 344 LNLQTYSIMIDGL 356
+ T+ ++ + L
Sbjct: 564 GDASTFGLVTNML 576
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 21/313 (6%)
Query: 108 KRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCV 167
K EN E I + + + Y HR DS+ +F+K+ F +
Sbjct: 78 KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDP------------------ 119
Query: 168 DGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDA-L 226
K +L+ + E+ L + F + M+++G + +I++L + + DA L
Sbjct: 120 SQKAYVTVLAILVEENQL--NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 227 GILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGL 286
I +M G PD Y +++G+ +A++LF E++ P V TY INGL
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 287 CKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNL 346
C NV+ ++ + M+ G +P+V TY++L+ LCK + EL + M +G N+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 347 QTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQ 406
TY+ +I GL + I EA LL+ +GL + ++ + I G C R+A L +
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 407 MADKDVSPGARVW 419
M ++P W
Sbjct: 358 MILGGITPNRLTW 370
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 162/370 (43%), Gaps = 28/370 (7%)
Query: 67 LLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTY 126
+ H ++C+P +AY V+ L E +Q ++ + I L T
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMRE-----------IGLPPTV 156
Query: 127 ADAHRFQDSVNLFYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLS 186
A S+N+ K V ++I M G D T ++S +C R
Sbjct: 157 A-------SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLC--RFGR 207
Query: 187 SDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTM 246
DE EM + +V YT++I L + V +A+ L +MKS GI+P++ Y+
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 247 VLNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELG 306
+++G+ ++A ELF+ ++ G P++ TY I GLCK+ ++ ++++ M G
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG 327
Query: 307 SKPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSI-------MIDGLASK 359
KPD Y ++ C + + + EM GI N T++I ++ GL +
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN 387
Query: 360 GDIIEACGLLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVW 419
A L ++G+ + + + LC++G +KA++L+ ++ P W
Sbjct: 388 YP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTW 446
Query: 420 EALLLSSVSK 429
+ L+ ++ K
Sbjct: 447 KLLIGHTLDK 456
>sp|Q9SAD9|PPR40_ARATH Pentatricopeptide repeat-containing protein At1g13040,
mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2
SV=1
Length = 517
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 138/282 (48%), Gaps = 7/282 (2%)
Query: 145 FRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQR--DLSSDELLGFVQEMKKLGF 202
FR +V A+EI N MI G D K C+ ++ +C R DL+ + + +E+K
Sbjct: 160 FRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV---AEEIKSARV 216
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V Y +I K ++ A + + M G +PD+V Y ++LN +AE
Sbjct: 217 KLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEG 276
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIK-MIACMEELGSKPDVITYNTLLQAL 321
+ E++ G+ D Y+YN + C+ ++ + M+ ME G DV++Y+TL++
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETF 335
Query: 322 CKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQS 381
C+ + L +EM+ KG+V+N+ TY+ +I +G+ A LL++ GL
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 382 SMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
+ + LC+ G V KA + M + +++P A + +L+
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 1/237 (0%)
Query: 188 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 247
D + EM+ + DY I LV++ + A I MK G Y+
Sbjct: 26 DNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRF 85
Query: 248 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 307
++G+ + + + L ++ LG +PD++ +NVY++ LC++N V ++ CM + G
Sbjct: 86 ISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGR 145
Query: 308 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 367
+PDV++Y L+ L + ++ E+ M G+ + + + ++ GL + A
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 368 LLEEALNKGLCTQSS-MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ E + S+ +++ I G C+ G + KA L M+ P + LL
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 106/217 (48%), Gaps = 3/217 (1%)
Query: 209 YTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVK-AEELFDEL 267
Y + I +LVK + +A+ + ++M+ + Y + GV+V+E + AE ++ ++
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFI-GVLVRESRFELAEAIYWDM 70
Query: 268 LVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVREL 327
+G +TY+ +I+GLCK + +++ ME LG PD+ +N L LC+ ++
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 328 NRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSSMFDET 387
+ M +G ++ +Y+I+I+GL G + +A + + G+ +
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 388 ICGLCQRGLVRKALELL-KQMADKDVSPGARVWEALL 423
+ GLC V A E++ +++ V V+ AL+
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALI 227
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 38/246 (15%)
Query: 79 PPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNL 138
P + Y+F++K + E FCD+ S + LI+T+ A + + L
Sbjct: 306 PDKCYNFMVKEM-EPRGFCDVVS-----------------YSTLIETFCRASNTRKAYRL 347
Query: 139 FYKIPKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMK 198
F ++ + G + ++ SLI + + E + +LL +M
Sbjct: 348 FEEM-----RQKGMVMNVVT------------YTSLIKAFLREGNSSVAKKLL---DQMT 387
Query: 199 KLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYV 258
+LG + YT ++ L K V A G+ N M I PD + Y +++G+
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVT 447
Query: 259 KAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLL 318
+A +LF+++ PD T+ I GL + + A K+ M + G D +TL+
Sbjct: 448 EAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Query: 319 QALCKV 324
+A C +
Sbjct: 508 KASCSM 513
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 174/413 (42%), Gaps = 74/413 (17%)
Query: 81 EAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIK---------------- 124
E Y + + LA + F + S+++ + R+ + +FI L++
Sbjct: 119 ETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMI 178
Query: 125 TYADAHRFQDSVNLFYKIPKFR-----------INRV----------GFAIEILNCMIND 163
TY D D++ F K R ++R+ GF +EIL+
Sbjct: 179 TYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDA---- 234
Query: 164 GFCVDGKTCSLILSSVCEQRDLSS---------------------------------DEL 190
GF ++ +++++ C++ ++S DE
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 191 LGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNG 250
+M+K + Y+ +I +L K+ K+ A G+ ++M G+ P+ V +T +++G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 251 VIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPD 310
+ +E + ++L GL PD+ YN +NG CK ++ A ++ M G +PD
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 311 VITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLE 370
ITY TL+ C+ ++ E+ KEM GI L+ +S ++ G+ +G +I+A L
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 371 EALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
E L G+ + + C++G + +LLK+M P + LL
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 147/341 (43%), Gaps = 21/341 (6%)
Query: 83 YHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFIDLIKTYADAHRFQDSVNLFYKI 142
++ ++ + D V D I KR + + F LI Y + L +++
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKR-SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 143 PKFRINRVGFAIEILNCMINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGF 202
K R F T S +++++C++ + D G EM K G
Sbjct: 302 EKSRTRPDVF------------------TYSALINALCKENKM--DGAHGLFDEMCKRGL 341
Query: 203 CFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEE 262
V +T +I + ++ +M S G++PDIV Y ++NG D V A
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 263 LFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALC 322
+ D ++ GL PD TY I+G C+ +VE +++ M++ G + D + ++ L+ +C
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 323 KVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACGLLEEALNKGLCTQSS 382
K + ++EM GI + TY++M+D KGD LL+E + G
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 383 MFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALL 423
++ + GLC+ G ++ A LL M + V P + LL
Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query: 160 MINDGFCVDGKTCSLILSSVCEQRDLSSDELLGFVQEMKKLGFCFGMVDYTNVIRSLVKK 219
M++ G D + +++ C+ DL + V M + G + YT +I +
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAAR--NIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 220 EKVFDALGILNQMKSDGIKPDIVCYTMVLNGVIVQEDYVKAEELFDELLVLGLVPDVYTY 279
V AL I +M +GI+ D V ++ ++ G+ + + AE E+L G+ PD TY
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 280 NVYINGLCKQNNVEAGIKMIACMEELGSKPDVITYNTLLQALCKVRELNRLRELVKEMKW 339
+ ++ CK+ + + G K++ M+ G P V+TYN LL LCK+ ++ L+ M
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 340 KGIVLNLQTYSIMIDG 355
G+V + TY+ +++G
Sbjct: 549 IGVVPDDITYNTLLEG 564
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,876,261
Number of Sequences: 539616
Number of extensions: 6921598
Number of successful extensions: 26830
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 21747
Number of HSP's gapped (non-prelim): 2498
length of query: 453
length of database: 191,569,459
effective HSP length: 121
effective length of query: 332
effective length of database: 126,275,923
effective search space: 41923606436
effective search space used: 41923606436
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)