Citrus Sinensis ID: 039179

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-----
Protein Sequence
QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI
Secondary Structure (PSIPRED)
ccccEEccccEEEcccEEEEEEcccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHEEEcccccEEEEEEEcccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEccc
Coil and Loop (DISEMBL)
QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHkenealelnwtnnVNIAKCVAHALSYlhhhctpsiiyrdi
Flexible Loop (DISEMBL)
qhqnivklYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYlhhhctpsiiyrdi
Low Complexity Region (SEG)
QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI
Disordered region (IsUnstruct)
****IVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY***
Disordered Region (DISOPRED)
QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI
Disordered Region (DISEMBL)
QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI
Disordered Region (DISPRO)
*HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	75	2.2.26 [Sep-21-2011]
Q8VZG8	1045	Probable LRR receptor-lik	yes	no	1.0	0.071	0.533	6e-21
Q9LP24	1120	Probable leucine-rich rep	no	no	1.0	0.066	0.52	7e-19
Q9SHI2	1101	Leucine-rich repeat recep	no	no	1.0	0.068	0.453	3e-14
Q9LVP0	1102	Probable leucine-rich rep	no	no	0.973	0.066	0.453	5e-14
Q9M0G7	1013	Leucine-rich repeat recep	no	no	1.0	0.074	0.454	7e-14
P93194	1109	Receptor-like protein kin	N/A	no	1.0	0.067	0.453	1e-13
C0LGW6	966	LRR receptor-like serine/	no	no	1.0	0.077	0.453	2e-13
Q6XAT2	967	LRR receptor-like serine/	no	no	1.0	0.077	0.453	2e-13
Q9SSL9	1123	Leucine-rich repeat recep	no	no	0.96	0.064	0.468	3e-13
Q9FHG4	681	Probable L-type lectin-do	no	no	1.0	0.110	0.415	4e-13

>sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3

 Score = 99.4 bits (246), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 40/75 (53%), Positives = 59/75 (78%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+N+VKL+GFC H++  F +Y+YMERGSL  VL  ++EA +L+W   +N+ K VAHALS
Sbjct: 832 RHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALS 891

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH  +P+I++RDI
Sbjct: 892 YMHHDRSPAIVHRDI 906

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/75 (52%), Positives = 54/75 (72%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+N+VKL+GFC H++  F IY+YME+GSL  +L  + EA  L WT  +N+ K VAHALS
Sbjct: 908 RHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLANDEEAKRLTWTKRINVVKGVAHALS 967

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH     I++RDI
Sbjct: 968 YMHHDRITPIVHRDI 982

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 45/75 (60%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIVKLYGFC H+     +Y+YM +GSL   L +  +   L+W     IA   A  L 
Sbjct: 853 RHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRIALGAAEGLC 912

Query: 61  YLHHHCTPSIIYRDI 75
           YLHH C P I++RDI
Sbjct: 913 YLHHDCRPQIVHRDI 927

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LVP0|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=1 SV=1

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIVKL+GFC H+     +Y+YM +GSL  +LH  + +  L+W+    IA   A  L+
Sbjct: 861 RHRNIVKLHGFCNHQGSNLLLYEYMPKGSLGEILH--DPSCNLDWSKRFKIALGAAQGLA 918

Query: 61  YLHHHCTPSIIYRDI 75
           YLHH C P I +RDI
Sbjct: 919 YLHHDCKPRIFHRDI 933

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M0G7|PXL2_ARATH Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 2/77 (2%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEA--LELNWTNNVNIAKCVAHA 58
           +H+NIV+L GF  + K M  +Y++M  G+L   +H +N A  L ++W +  NIA  VAH 
Sbjct: 756 RHRNIVRLLGFLYNDKNMMIVYEFMLNGNLGDAIHGKNAAGRLLVDWVSRYNIALGVAHG 815

Query: 59  LSYLHHHCTPSIIYRDI 75
           L+YLHH C P +I+RDI
Sbjct: 816 LAYLHHDCHPPVIHRDI 832

Involved in the regulation of procambium maintenance and polarity during vascular-tissue development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P93194|RPK1_IPONI Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 48/75 (64%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+N++KL  F L K+    +Y YME GSL  +LH+ N    L+W+   NIA   AH L+
Sbjct: 869 RHRNLIKLEEFWLRKEYGLILYTYMENGSLHDILHETNPPKPLDWSTRHNIAVGTAHGLA 928

Query: 61  YLHHHCTPSIIYRDI 75
           YLH  C P+I++RDI
Sbjct: 929 YLHFDCDPAIVHRDI 943

Possible role in short-day photoperiod floral induction.

Ipomoea nil (taxid: 35883)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGW6|ERL1_ARATH LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 46/75 (61%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIV L+G+ L        Y YME GSL  +LH   + ++L+W   + IA   A  L+
Sbjct: 700 RHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLA 759

Query: 61  YLHHHCTPSIIYRDI 75
           YLHH CTP II+RDI
Sbjct: 760 YLHHDCTPRIIHRDI 774

Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ER and ERL2.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6XAT2|ERL2_ARATH LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/75 (45%), Positives = 46/75 (61%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIV L+G+ L        Y YME GSL  +LH   + ++L+W   + IA   A  L+
Sbjct: 703 RHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHGPGKKVKLDWETRLKIAVGAAQGLA 762

Query: 61  YLHHHCTPSIIYRDI 75
           YLHH CTP II+RDI
Sbjct: 763 YLHHDCTPRIIHRDI 777

Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ERL1 and ER.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SSL9|PEPR1_ARATH Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 7/79 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLH----KENEALELNWTNNVNIAKCVA 56
           +H+N++KL GF L K     +Y+YM +GSL  VLH    KEN    L+W+   N+A  VA
Sbjct: 880 RHRNLIKLEGFWLRKDDGLMLYRYMPKGSLYDVLHGVSPKENV---LDWSARYNVALGVA 936

Query: 57  HALSYLHHHCTPSIIYRDI 75
           H L+YLH+ C P I++RDI
Sbjct: 937 HGLAYLHYDCHPPIVHRDI 955

Acts as a receptor for PEP defense peptides. Unlike typical immune receptors, senses an endogenous elicitor that potentiates PAMP-inducible plant responses.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FHG4|LRKS7_ARATH Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana GN=LECRKS7 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/77 (41%), Positives = 55/77 (71%), Gaps = 2/77 (2%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE--ALELNWTNNVNIAKCVAHA 58
           +H+N+V+L G+C  K  +  +Y++M  GSL  +L++E++  A+ L+W++ +NIA  +A A
Sbjct: 418 RHKNLVQLQGWCNEKGELLLVYEFMPNGSLDKILYQESQTGAVALDWSHRLNIAIGLASA 477

Query: 59  LSYLHHHCTPSIIYRDI 75
           LSYLHH C   +++RDI
Sbjct: 478 LSYLHHECEQQVVHRDI 494

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
225452698	727	PREDICTED: probable LRR receptor-like se	1.0	0.103	0.626	2e-24
147834736	622	hypothetical protein VITISV_033634 [Viti	1.0	0.120	0.626	4e-24
225466223	736	PREDICTED: probable leucine-rich repeat	1.0	0.101	0.626	7e-24
296082878	1699	unnamed protein product [Vitis vinifera]	0.946	0.041	0.626	1e-23
359484068	868	PREDICTED: probable leucine-rich repeat	1.0	0.086	0.653	1e-23
359488981	757	PREDICTED: probable LRR receptor-like se	1.0	0.099	0.626	2e-23
359488983	758	PREDICTED: probable LRR receptor-like se	1.0	0.098	0.626	2e-23
147834735	513	hypothetical protein VITISV_033633 [Viti	1.0	0.146	0.653	3e-23
225452694	783	PREDICTED: probable LRR receptor-like se	1.0	0.095	0.653	3e-23
296085307	874	unnamed protein product [Vitis vinifera]	1.0	0.085	0.653	4e-23

>gi|225452698|ref|XP_002276923.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera]

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/75 (62%), Positives = 63/75 (84%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIVKL+GFCLH++ MF +Y++MERGSL C+L  E EALEL+WT  +N+ K +AHALS
Sbjct: 489 RHRNIVKLHGFCLHRRSMFLVYQFMERGSLFCMLSHEVEALELDWTKRLNVVKSIAHALS 548

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH C+P II+RDI
Sbjct: 549 YMHHDCSPPIIHRDI 563

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147834736|emb|CAN59750.1| hypothetical protein VITISV_033634 [Vitis vinifera]

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/75 (62%), Positives = 63/75 (84%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIVKL+GFCLH++ MF +Y++MERGSL C+L  E EALEL+WT  +N+ K +AHALS
Sbjct: 510 RHRNIVKLHGFCLHRRSMFLVYQFMERGSLFCMLSHEVEALELDWTKRLNVVKSIAHALS 569

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH C+P II+RDI
Sbjct: 570 YMHHDCSPPIIHRDI 584

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466223|ref|XP_002267065.1| PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera] gi|147859823|emb|CAN79273.1| hypothetical protein VITISV_014885 [Vitis vinifera]

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 47/75 (62%), Positives = 61/75 (81%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIVKLYGFCLHK+CMF +Y+YMERGSL CVL  E EALE +W   VN+ K +A+ALS
Sbjct: 501 RHRNIVKLYGFCLHKRCMFLVYEYMERGSLHCVLSDEIEALEFDWIKRVNVVKSIANALS 560

Query: 61  YLHHHCTPSIIYRDI 75
           Y+H+ C P +++RDI
Sbjct: 561 YMHNDCIPPLLHRDI 575

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082878|emb|CBI22179.3| unnamed protein product [Vitis vinifera]

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/75 (62%), Positives = 61/75 (81%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIVKL+GFCLHK+CMF +YKYME+GSL C+L  E EA+EL+W   VN+ K +A+ALS
Sbjct: 821 RHRNIVKLHGFCLHKRCMFLVYKYMEKGSLYCMLRDEVEAVELDWIKRVNVVKSIANALS 880

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH C   II+RDI
Sbjct: 881 YMHHDCDLPIIHRDI 895

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359484068|ref|XP_002271708.2| PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Vitis vinifera]

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/75 (65%), Positives = 60/75 (80%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH+NI+KL+G+CLHK+CMF IYKYMERGSL CVL  E EALEL+W   VN+ K + HAL 
Sbjct: 633 QHRNIIKLHGYCLHKRCMFLIYKYMERGSLYCVLSNEVEALELDWIKRVNVIKSIVHALC 692

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH  TP II+RD+
Sbjct: 693 YMHHDSTPPIIHRDV 707

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488981|ref|XP_002275364.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera]

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/75 (62%), Positives = 61/75 (81%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIVKL+GFCLHK+CMF +YKYME+GSL C+L  E EA+EL+W   VN+ K +A+ALS
Sbjct: 522 RHRNIVKLHGFCLHKRCMFLVYKYMEKGSLYCMLRDEVEAVELDWIKRVNVVKSIANALS 581

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH C   II+RDI
Sbjct: 582 YMHHDCDLPIIHRDI 596

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488983|ref|XP_002277433.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera]

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/75 (62%), Positives = 61/75 (81%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIVKL+GFCLHK+CMF +YKYME+GSL C+L  E EA+EL+W   VN+ K +A+ALS
Sbjct: 523 RHRNIVKLHGFCLHKRCMFLVYKYMEKGSLYCMLRDEVEAVELDWIKRVNVVKSIANALS 582

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH C   II+RDI
Sbjct: 583 YMHHDCDLPIIHRDI 597

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147834735|emb|CAN59749.1| hypothetical protein VITISV_033633 [Vitis vinifera]

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/75 (65%), Positives = 60/75 (80%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIVKL+G+CLH +CMF IY YM RGSL C+L    EA+EL+W   VNI K +AHALS
Sbjct: 388 RHRNIVKLHGYCLHNRCMFLIYMYMGRGSLYCMLSDAVEAVELDWVKRVNIVKNMAHALS 447

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH CTPSII+RDI
Sbjct: 448 YMHHDCTPSIIHRDI 462

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452694|ref|XP_002276873.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera]

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/75 (65%), Positives = 60/75 (80%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIVKL+G+CLH +CMF I  YMERGSL C+L  E EA+EL+W   VNI K +AHALS
Sbjct: 547 RHRNIVKLHGYCLHNRCMFLICMYMERGSLNCMLSNEVEAVELDWVKRVNIVKNMAHALS 606

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH CTP II+RDI
Sbjct: 607 YMHHDCTPPIIHRDI 621

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085307|emb|CBI29039.3| unnamed protein product [Vitis vinifera]

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 60/75 (80%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH+NI+KL+G+CLHK+CMF IYKYMERGSL CVL  E EALEL+W   VN+ K + HAL 
Sbjct: 639 QHRNIIKLHGYCLHKRCMFLIYKYMERGSLYCVLSNEVEALELDWIKRVNVIKSIVHALC 698

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH  TP II+RD+
Sbjct: 699 YMHHDSTPPIIHRDV 713

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
TAIR|locus:2138268	1045	AT4G08850 [Arabidopsis thalian	1.0	0.071	0.533	1.2e-18
TAIR|locus:2011339	1120	AT1G35710 [Arabidopsis thalian	1.0	0.066	0.52	5.4e-17
TAIR|locus:2020417	1101	AT1G17230 [Arabidopsis thalian	1.0	0.068	0.453	1.2e-12
TAIR|locus:2139885	1013	AT4G28650 [Arabidopsis thalian	1.0	0.074	0.454	1.4e-12
UNIPROTKB|P93194	1109	INRPK1 "Receptor-like protein	1.0	0.067	0.453	1.6e-12
TAIR|locus:2160791	1102	AT5G63930 [Arabidopsis thalian	0.973	0.066	0.453	2e-12
TAIR|locus:2162212	681	AT5G55830 [Arabidopsis thalian	1.0	0.110	0.415	2.2e-12
TAIR|locus:2198998	427	AT1G80640 [Arabidopsis thalian	1.0	0.175	0.4	2.5e-12
TAIR|locus:2167948	966	ERL1 "ERECTA-like 1" [Arabidop	1.0	0.077	0.453	4.6e-12
TAIR|locus:2182855	967	ERL2 "ERECTA-like 2" [Arabidop	1.0	0.077	0.453	4.6e-12

TAIR|locus:2138268 AT4G08850 [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 40/75 (53%), Positives = 59/75 (78%)

Query:     1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
             +H+N+VKL+GFC H++  F +Y+YMERGSL  VL  ++EA +L+W   +N+ K VAHALS
Sbjct:   832 RHRNVVKLFGFCSHRRNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALS 891

Query:    61 YLHHHCTPSIIYRDI 75
             Y+HH  +P+I++RDI
Sbjct:   892 YMHHDRSPAIVHRDI 906

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

TAIR|locus:2011339 AT1G35710 [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 5.4e-17, P = 5.4e-17
 Identities = 39/75 (52%), Positives = 54/75 (72%)

Query:     1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
             +H+N+VKL+GFC H++  F IY+YME+GSL  +L  + EA  L WT  +N+ K VAHALS
Sbjct:   908 RHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLANDEEAKRLTWTKRINVVKGVAHALS 967

Query:    61 YLHHHCTPSIIYRDI 75
             Y+HH     I++RDI
Sbjct:   968 YMHHDRITPIVHRDI 982

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

TAIR|locus:2020417 AT1G17230 [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 34/75 (45%), Positives = 45/75 (60%)

Query:     1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
             +H+NIVKLYGFC H+     +Y+YM +GSL   L +  +   L+W     IA   A  L 
Sbjct:   853 RHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRIALGAAEGLC 912

Query:    61 YLHHHCTPSIIYRDI 75
             YLHH C P I++RDI
Sbjct:   913 YLHHDCRPQIVHRDI 927

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2139885 AT4G28650 [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 1.4e-12, P = 1.4e-12
 Identities = 35/77 (45%), Positives = 51/77 (66%)

Query:     1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEA--LELNWTNNVNIAKCVAHA 58
             +H+NIV+L GF  + K M  +Y++M  G+L   +H +N A  L ++W +  NIA  VAH 
Sbjct:   756 RHRNIVRLLGFLYNDKNMMIVYEFMLNGNLGDAIHGKNAAGRLLVDWVSRYNIALGVAHG 815

Query:    59 LSYLHHHCTPSIIYRDI 75
             L+YLHH C P +I+RDI
Sbjct:   816 LAYLHHDCHPPVIHRDI 832

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010067 "procambium histogenesis" evidence=ISS

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

UNIPROTKB|P93194 INRPK1 "Receptor-like protein kinase" [Ipomoea nil (taxid:35883)]

 Score = 180 (68.4 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 34/75 (45%), Positives = 48/75 (64%)

Query:     1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
             +H+N++KL  F L K+    +Y YME GSL  +LH+ N    L+W+   NIA   AH L+
Sbjct:   869 RHRNLIKLEEFWLRKEYGLILYTYMENGSLHDILHETNPPKPLDWSTRHNIAVGTAHGLA 928

Query:    61 YLHHHCTPSIIYRDI 75
             YLH  C P+I++RDI
Sbjct:   929 YLHFDCDPAIVHRDI 943

GO:0005524 "ATP binding" evidence=NAS

GO:0005576 "extracellular region" evidence=NAS

GO:0005886 "plasma membrane" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0019199 "transmembrane receptor protein kinase activity" evidence=NAS

TAIR|locus:2160791 AT5G63930 [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 2.0e-12, P = 2.0e-12
 Identities = 34/75 (45%), Positives = 48/75 (64%)

Query:     1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
             +H+NIVKL+GFC H+     +Y+YM +GSL  +LH  + +  L+W+    IA   A  L+
Sbjct:   861 RHRNIVKLHGFCNHQGSNLLLYEYMPKGSLGEILH--DPSCNLDWSKRFKIALGAAQGLA 918

Query:    61 YLHHHCTPSIIYRDI 75
             YLHH C P I +RDI
Sbjct:   919 YLHHDCKPRIFHRDI 933

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2162212 AT5G55830 [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 32/77 (41%), Positives = 55/77 (71%)

Query:     1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE--ALELNWTNNVNIAKCVAHA 58
             +H+N+V+L G+C  K  +  +Y++M  GSL  +L++E++  A+ L+W++ +NIA  +A A
Sbjct:   418 RHKNLVQLQGWCNEKGELLLVYEFMPNGSLDKILYQESQTGAVALDWSHRLNIAIGLASA 477

Query:    59 LSYLHHHCTPSIIYRDI 75
             LSYLHH C   +++RDI
Sbjct:   478 LSYLHHECEQQVVHRDI 494

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

TAIR|locus:2198998 AT1G80640 [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 30/75 (40%), Positives = 46/75 (61%)

Query:     1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
             +HQNIV L GFC++++    +Y+ M+ GSL   LH  ++   L W   + IA  +A  L 
Sbjct:   202 RHQNIVSLLGFCVYRQTSCIVYELMQNGSLESQLHGPSQGSGLTWQLRMKIAVDIARGLE 261

Query:    61 YLHHHCTPSIIYRDI 75
             YLH HC P +++RD+
Sbjct:   262 YLHEHCHPPVVHRDL 276

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2167948 ERL1 "ERECTA-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 4.6e-12, P = 4.6e-12
 Identities = 34/75 (45%), Positives = 46/75 (61%)

Query:     1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
             +H+NIV L+G+ L        Y YME GSL  +LH   + ++L+W   + IA   A  L+
Sbjct:   700 RHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLA 759

Query:    61 YLHHHCTPSIIYRDI 75
             YLHH CTP II+RDI
Sbjct:   760 YLHHDCTPRIIHRDI 774

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010103 "stomatal complex morphogenesis" evidence=IGI;RCA

GO:0009553 "embryo sac development" evidence=IGI

GO:0048481 "ovule development" evidence=IGI;RCA

GO:0016020 "membrane" evidence=IDA

GO:0001708 "cell fate specification" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0009886 "post-embryonic morphogenesis" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0048441 "petal development" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

GO:0048507 "meristem development" evidence=RCA

TAIR|locus:2182855 ERL2 "ERECTA-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 4.6e-12, P = 4.6e-12
 Identities = 34/75 (45%), Positives = 46/75 (61%)

Query:     1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
             +H+NIV L+G+ L        Y YME GSL  +LH   + ++L+W   + IA   A  L+
Sbjct:   703 RHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHGPGKKVKLDWETRLKIAVGAAQGLA 762

Query:    61 YLHHHCTPSIIYRDI 75
             YLHH CTP II+RDI
Sbjct:   763 YLHHDCTPRIIHRDI 777

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010103 "stomatal complex morphogenesis" evidence=IGI;RCA

GO:0009553 "embryo sac development" evidence=IGI

GO:0048481 "ovule development" evidence=IGI;RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0009886 "post-embryonic morphogenesis" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

GO:0048507 "meristem development" evidence=RCA

GO:0048608 "reproductive structure development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	75
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	1e-12
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-12
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	9e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-10
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-09
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-09
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-08
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-07
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	7e-06
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-05
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-05
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	4e-05
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-05
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	8e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	9e-05
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	4e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	6e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	9e-04
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.001
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	0.001
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.001
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	0.002
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	0.002
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	0.002
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.002
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	0.002
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.002
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	0.002
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	0.003
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	0.003
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.003
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	0.004

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 60.2 bits (146), Expect = 1e-12
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH NIVKL G C  +K  + I++Y+E  +L  VL        L+W     IA  +A AL 
Sbjct: 741 QHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL------RNLSWERRRKIAIGIAKALR 794

Query: 61  YLHHHCTPSII 71
           +LH  C+P+++
Sbjct: 795 FLHCRCSPAVV 805

Length = 968

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 58.7 bits (143), Expect = 3e-12
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NIV+L G C   + ++ + +YM  G L   L K  E L L     + +A  +A  + 
Sbjct: 59  SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDL--LQMALQIAKGME 116

Query: 61  YLHHHCTPSIIYRDI 75
           YL      + ++RD+
Sbjct: 117 YLESK---NFVHRDL 128

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 54.6 bits (132), Expect = 9e-11
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NIVKLYG    +  ++ + +Y E GSL  +L +    L  +    + I   +   L 
Sbjct: 49  NHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEI--LRILLQILEGLE 106

Query: 61  YLHHHCTPSIIYRDI 75
           YLH +    II+RD+
Sbjct: 107 YLHSN---GIIHRDL 118

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 52.2 bits (126), Expect = 7e-10
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NIVKL G C  ++ +  + +YM  G L   L ++N   EL+ ++ ++ A  +A  + 
Sbjct: 59  DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYL-RKNRPKELSLSDLLSFALQIARGME 117

Query: 61  YLHHHCTPSIIYRDI 75
           YL        I+RD+
Sbjct: 118 YLESKN---FIHRDL 129

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H N+VKL G C  ++ ++ + +YME G L   L K     +L+ ++ ++ A  +A  + 
Sbjct: 59  DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRP--KLSLSDLLSFALQIARGME 116

Query: 61  YLHHHCTPSIIYRDI 75
           YL        I+RD+
Sbjct: 117 YLESKN---FIHRDL 128

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 50.6 bits (122), Expect = 3e-09
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNN------VNIAKC 54
            H N+V+L G C  ++ ++ + +YME G L   L K          +       ++ A  
Sbjct: 54  GHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQ 113

Query: 55  VAHALSYLHHHCTPSIIYRDI 75
           +A  + YL        ++RD+
Sbjct: 114 IAKGMEYLASK---KFVHRDL 131

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NIV+LY     +  ++ + +Y E G L  +L K    L  +        + +  AL 
Sbjct: 55  KHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKK-RGRLSEDEA--RFYLRQILSALE 111

Query: 61  YLHHHCTPSIIYRDI 75
           YLH      I++RD+
Sbjct: 112 YLHSKG---IVHRDL 123

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 46.5 bits (111), Expect = 1e-07
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NIV+L      K  ++ + +Y E G L   L +      L+      IA  +   L 
Sbjct: 56  SHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGG---PLSEDEAKKIALQILRGLE 112

Query: 61  YLHHHCTPSIIYRDI 75
           YLH +    II+RD+
Sbjct: 113 YLHSN---GIIHRDL 124

Length = 260

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 45.1 bits (107), Expect = 3e-07
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H N+V+LYG C  ++ +F + +YM  G L   L +    L   W   +++   V  A+ 
Sbjct: 57  SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWL--LDMCSDVCEAME 114

Query: 61  YLHHHCTPSIIYRDI 75
           YL  +     I+RD+
Sbjct: 115 YLESNG---FIHRDL 126

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 43.2 bits (100), Expect = 2e-06
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSY 61
             NIVKLY F   +  ++ + +Y++ GSL  +L K      L+ +  + I   +  AL Y
Sbjct: 57  PPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116

Query: 62  LHHHCTPSIIYRDI 75
           LH      II+RDI
Sbjct: 117 LHSKG---IIHRDI 127

Length = 384

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NIV  Y   L    ++ + +YM+ GSL  ++      + +N      + + V   L 
Sbjct: 73  KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDII--TQNFVRMNEPQIAYVCREVLQGLE 130

Query: 61  YLH-HHCTPSIIYRDI 75
           YLH  +     I+RDI
Sbjct: 131 YLHSQNV----IHRDI 142

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 41.4 bits (98), Expect = 6e-06
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 14/80 (17%)

Query: 1   QHQNIVKLYGFCLHK-KCMFAIY-KYMERGSLCCVLHKE---NEALELNWTNNVNIAKCV 55
           QH NIV+ YG    + K    I+ +Y+  GSL  +L K     E +   +T      + +
Sbjct: 57  QHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYT------RQI 110

Query: 56  AHALSYLHHHCTPSIIYRDI 75
              L+YLH +    I++RDI
Sbjct: 111 LEGLAYLHSNG---IVHRDI 127

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 41.3 bits (97), Expect = 7e-06
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 16/83 (19%)

Query: 1   QHQNIVKLYGFCLHKK-CMFAI-YKYMERGSLCCVLHKENEALELNWTNNVN------IA 52
           +   IVK YG  L +      I  +Y E GSL  +  K  +         +       IA
Sbjct: 57  KSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKR-----GGRIGEKVLGKIA 111

Query: 53  KCVAHALSYLHHHCTPSIIYRDI 75
           + V   LSYLH   +  II+RDI
Sbjct: 112 ESVLKGLSYLH---SRKIIHRDI 131

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 40.4 bits (95), Expect = 1e-05
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NI++L G     + +  I +YME GSL   L +EN+  +      V + + +A  + 
Sbjct: 63  DHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFL-RENDG-KFTVGQLVGMLRGIASGMK 120

Query: 61  YLHHHCTPSIIYRDI 75
           YL        ++RD+
Sbjct: 121 YLSEMNY---VHRDL 132

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 11/73 (15%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVL-----------HKENEALELNWTNNV 49
           QH+NIVK YG C        +++YME G L   L             ++   EL  +  +
Sbjct: 66  QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLL 125

Query: 50  NIAKCVAHALSYL 62
            IA  +A  + YL
Sbjct: 126 QIAVQIASGMVYL 138

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 39.2 bits (91), Expect = 4e-05
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSY 61
           H++IV LYG C+       + +++E G L   +H++++ L   W     +AK +A ALSY
Sbjct: 63  HKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPW--KFKVAKQLASALSY 120

Query: 62  L 62
           L
Sbjct: 121 L 121

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 39.1 bits (92), Expect = 4e-05
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSY 61
           H NIVK YG  L K  ++ + ++   GSL  +L   N+ L  +      + K +   L Y
Sbjct: 56  HPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQI--AYVCKELLKGLEY 113

Query: 62  LHHHCTPSIIYRDI 75
           LH +    II+RDI
Sbjct: 114 LHSN---GIIHRDI 124

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 39.2 bits (91), Expect = 4e-05
 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 7/75 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QHQN+V++Y   L  + ++ + ++++ G+L  ++ +      LN      + + V  AL 
Sbjct: 76  QHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----TRLNEEQIATVCESVLQALC 131

Query: 61  YLHHHCTPSIIYRDI 75
           YLH   +  +I+RDI
Sbjct: 132 YLH---SQGVIHRDI 143

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 14/79 (17%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVA---- 56
           +H NIVKL      ++ ++ +++Y +   L   L K    L  N        K +     
Sbjct: 56  KHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNL------IKSIMYQLL 108

Query: 57  HALSYLHHHCTPSIIYRDI 75
             L+Y H H    I++RD+
Sbjct: 109 RGLAYCHSHR---ILHRDL 124

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 38.1 bits (88), Expect = 8e-05
 Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 13/85 (15%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL----------CCVLHKENEALELNWTNNVN 50
           QH++IVK YG C+    +  +++YM+ G L            ++ + N   EL  +  ++
Sbjct: 65  QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLH 124

Query: 51  IAKCVAHALSYLHHHCTPSIIYRDI 75
           IA+ +A  + YL    +   ++RD+
Sbjct: 125 IAQQIAAGMVYL---ASQHFVHRDL 146

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 38.2 bits (89), Expect = 9e-05
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH NIV++Y   L    ++ + +++E G+L  ++        +N      +   V  ALS
Sbjct: 74  QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIATVCLAVLKALS 129

Query: 61  YLHHHCTPSIIYRDI 75
           +LH      +I+RDI
Sbjct: 130 FLHAQ---GVIHRDI 141

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 37.4 bits (87), Expect = 2e-04
 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H  +++LY  C  ++ ++ + + M+ GSL   L        L     +++A  VA  ++
Sbjct: 59  RHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGG-AGRALKLPQLIDMAAQVASGMA 117

Query: 61  YLHHHCTPSIIYRDI 75
           YL      + I+RD+
Sbjct: 118 YLEAQ---NYIHRDL 129

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H  +V+LY  C  ++ ++ + +YM +GSL   L K  E  +L     V++A  +A  ++
Sbjct: 59  RHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFL-KSGEGKKLRLPQLVDMAAQIAEGMA 117

Query: 61  YLHHHCTPSIIYRDI 75
           YL      + I+RD+
Sbjct: 118 YLESR---NYIHRDL 129

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 12/78 (15%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE---NEALELNWTNNVNIAKCVAH 57
           +H NIVK  G       ++ I +Y E GSL  ++ K     E+L   +         V  
Sbjct: 57  KHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQ------VLQ 110

Query: 58  ALSYLHHHCTPSIIYRDI 75
            L+YLH      +I+RDI
Sbjct: 111 GLAYLH---EQGVIHRDI 125

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 11/78 (14%)

Query: 1   QHQNIVKLYGFCLHKKCMFAI-YKYMERGSLCCVLHKENEALELNWTNNV--NIAKCVAH 57
           +   +VK YG   +K+   +I  +YM+ GSL  +L K            V   IA+ +  
Sbjct: 57  ESPYVVKCYG-AFYKEGEISIVLEYMDGGSLADLLKKVG-----KIPEPVLAYIARQILK 110

Query: 58  ALSYLHHHCTPSIIYRDI 75
            L YLH      II+RDI
Sbjct: 111 GLDYLHT--KRHIIHRDI 126

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 14/78 (17%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALE----LNWTNNVNIAKCVAH 57
           H ++V+L G CL  +    I + M  G L   +    + +     LNW   V IAK    
Sbjct: 68  HPHVVRLLGICLSSQVQL-ITQLMPLGCLLDYVRNHKDNIGSQYLLNWC--VQIAK---- 120

Query: 58  ALSYLHHHCTPSIIYRDI 75
            +SYL       +++RD+
Sbjct: 121 GMSYLEEK---RLVHRDL 135

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 36.4 bits (84), Expect = 4e-04
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H N+V+L G C  +   + I ++M  G+L   L + N   E+N    + +A  ++ A+ 
Sbjct: 60  KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 118

Query: 61  YLHHHCTPSIIYRDI 75
           YL      + I+RD+
Sbjct: 119 YLEKK---NFIHRDL 130

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H N+V+L G  L    ++ + +YM +GSL   L     A+ +     +  A  V   + 
Sbjct: 58  RHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAV-ITLAQQLGFALDVCEGME 116

Query: 61  YLHHHCTPSIIYRDI 75
           YL      + ++RD+
Sbjct: 117 YLE---EKNFVHRDL 128

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 35.5 bits (82), Expect = 6e-04
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSY 61
           H NIVKL G C+ K+ ++ + + +  GSL   L K+   L +     + ++   A  + Y
Sbjct: 51  HPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVK--KLLQMSLDAAAGMEY 108

Query: 62  LHHHCTPSIIYRDI 75
           L        I+RD+
Sbjct: 109 LESKNC---IHRDL 119

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 35.2 bits (81), Expect = 9e-04
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 9/76 (11%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKC--VAHAL 59
           H  +V+LYG C  +K ++ + ++ME G L   L +    L    + ++ ++ C  V   +
Sbjct: 58  HPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKL----SKDMLLSMCQDVCEGM 113

Query: 60  SYLHHHCTPSIIYRDI 75
            YL  +   S I+RD+
Sbjct: 114 EYLERN---SFIHRDL 126

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 35.2 bits (81), Expect = 0.001
 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 5/74 (6%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSY 61
           H+ +V+LYG C  ++ ++ + +YM  G L   L +  +  +   +  + + K V   ++Y
Sbjct: 58  HEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQP--SQLLEMCKDVCEGMAY 115

Query: 62  LHHHCTPSIIYRDI 75
           L        I+RD+
Sbjct: 116 LESK---QFIHRDL 126

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK 36
              NI +L G C     +  I +YME G L   L K
Sbjct: 77  SDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQK 112

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 12/77 (15%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLH---KENEALELNWTNNVNIAKCVAHA 58
           H N+VK YG  +H++ ++   +Y   G+L  +L      +E +   +T  +         
Sbjct: 58  HPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLE------G 111

Query: 59  LSYLHHHCTPSIIYRDI 75
           L+YLH H    I++RDI
Sbjct: 112 LAYLHSH---GIVHRDI 125

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 34.6 bits (79), Expect = 0.002
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 1  QHQNIVKLYGFCLHKKCMFAIYKYMERGSL 30
          QHQ+IV+ YG C   + +  +++YM  G L
Sbjct: 65 QHQHIVRFYGVCTEGRPLLMVFEYMRHGDL 94

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 34.7 bits (80), Expect = 0.002
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 16/88 (18%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL--CCVLHKENEALE-----------LNWTN 47
           QH NIV L G C  ++    +++Y+  G L    V +  +  +            L+ ++
Sbjct: 66  QHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSD 125

Query: 48  NVNIAKCVAHALSYLHHHCTPSIIYRDI 75
            ++IA  +A  + YL  H     ++RD+
Sbjct: 126 FLHIAIQIAAGMEYLSSH---HFVHRDL 150

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 34.4 bits (79), Expect = 0.002
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALE------LNWTNNVNIAKC 54
            H+N+V+L G C   +  + I +Y + G L   L       E      L+    V +   
Sbjct: 66  SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQ 125

Query: 55  VAHALSYLHHHCTPSIIYRDI 75
           +A  + +L +      ++RD+
Sbjct: 126 IALGMDHLSNA---RFVHRDL 143

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 34.5 bits (79), Expect = 0.002
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 10/76 (13%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKC--VAHAL 59
           H +I+++ G            ++M  GS+  +L K        +   V I     +   L
Sbjct: 62  HPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGA-----FKEAVIINYTEQLLRGL 116

Query: 60  SYLHHHCTPSIIYRDI 75
           SYLH +    II+RD+
Sbjct: 117 SYLHEN---QIIHRDV 129

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 34.4 bits (79), Expect = 0.002
 Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H+++VKLYG C+  + +  + +Y++ G L   LH+E   + L+W   +++AK +A AL 
Sbjct: 59  SHKHLVKLYGVCVRDENIM-VEEYVKFGPLDVFLHREKNNVSLHWK--LDVAKQLASALH 115

Query: 61  YL 62
           YL
Sbjct: 116 YL 117

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 11/78 (14%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEA---LELNWTNNVNIAKCVAH 57
            H+N+++LYG  L    M  + +    GSL   L K+      +       V IA     
Sbjct: 54  DHENLIRLYGVVLTHPLMM-VTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIAN---- 108

Query: 58  ALSYLHHHCTPSIIYRDI 75
            + YL    +   I+RD+
Sbjct: 109 GMRYLE---SKRFIHRDL 123

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 34.0 bits (78), Expect = 0.002
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 19/80 (23%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSL------------CCVLHKENEA-------LE 42
           H NIVKL G C   K M  +++YM  G L            C + H  + A       L 
Sbjct: 67  HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLP 126

Query: 43  LNWTNNVNIAKCVAHALSYL 62
           L+ T  + IAK VA  ++YL
Sbjct: 127 LSCTEQLCIAKQVAAGMAYL 146

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 34.2 bits (78), Expect = 0.003
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 16/88 (18%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-EAL------------ELNWTN 47
           QH++IVK YG C     +  +++YM+ G L   L     +A+            EL  + 
Sbjct: 65  QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 124

Query: 48  NVNIAKCVAHALSYLHHHCTPSIIYRDI 75
            ++IA  +A  + YL    +   ++RD+
Sbjct: 125 MLHIASQIASGMVYL---ASQHFVHRDL 149

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 33.8 bits (78), Expect = 0.003
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
               IV  YG   +   +    +YM+ GSL  +L +    +       + +A  V   L+
Sbjct: 57  NSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVA--VLKGLT 114

Query: 61  YLHHHCTPSIIYRDI 75
           YLH      II+RD+
Sbjct: 115 YLHE--KHKIIHRDV 127

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 33.8 bits (77), Expect = 0.003
 Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH  +V+LY     ++ ++ I +YM +GSL   L K +E  ++     ++ +  +A  ++
Sbjct: 59  QHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMA 117

Query: 61  YLHHHCTPSIIYRDI 75
           Y+      + I+RD+
Sbjct: 118 YIERK---NYIHRDL 129

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 33.5 bits (76), Expect = 0.004
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 9/76 (11%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLC-CVLHKENEALELNWTNNVNIAKCVAHAL 59
            H+N+V +Y   L    ++ + +++E G+L   V H       +N      +   V  AL
Sbjct: 77  HHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT-----RMNEEQIATVCLSVLRAL 131

Query: 60  SYLHHHCTPSIIYRDI 75
           SYLH      +I+RDI
Sbjct: 132 SYLH---NQGVIHRDI 144

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	75
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.85
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.84
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.83
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.82
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.8
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.8
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.78
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.78
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.75
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.75
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.74
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.73
KOG0610	459	consensus Putative serine/threonine protein kinase	99.72
KOG0584	632	consensus Serine/threonine protein kinase [General	99.72
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.72
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.71
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.7
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.7
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.69
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.68
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.68
KOG0198	313	consensus MEKK and related serine/threonine protei	99.68
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.67
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.67
KOG0578	550	consensus p21-activated serine/threonine protein k	99.67
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.67
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.67
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.66
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.66
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.66
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.66
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.66
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.65
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.65
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.65
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.65
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.65
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.65
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.65
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.65
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.65
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.65
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.64
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.64
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.64
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.64
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.64
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.64
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.64
KOG0605	550	consensus NDR and related serine/threonine kinases	99.64
PTZ00267	478	NIMA-related protein kinase; Provisional	99.64
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.64
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.64
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.63
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.63
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.63
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.63
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.63
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.63
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.63
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.63
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.63
KOG0589	426	consensus Serine/threonine protein kinase [General	99.62
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.62
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.62
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.62
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.62
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.62
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.62
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.62
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.62
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.62
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.62
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.61
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.61
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.61
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.6
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.6
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.6
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.6
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.59
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.59
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.59
KOG0586	596	consensus Serine/threonine protein kinase [General	99.59
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.59
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.59
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.59
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.58
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.58
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.58
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.58
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.58
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.58
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.58
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.58
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.58
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.58
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.58
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.58
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.58
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.58
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.58
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.58
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.58
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.57
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.57
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.57
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.57
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.57
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.57
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.57
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.57
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.57
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.57
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.57
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.56
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.56
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.56
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.56
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.56
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.56
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.56
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.56
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.55
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.55
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.55
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.55
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.55
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.55
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.55
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.55
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.54
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.54
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.54
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.54
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.54
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.54
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.54
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.54
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.54
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.53
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.53
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.53
PHA02988	283	hypothetical protein; Provisional	99.53
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.53
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.53
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.53
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.53
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.53
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.53
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.53
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.53
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.52
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.52
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.52
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.52
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.52
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.52
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.52
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.52
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.52
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.52
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.52
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.52
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.51
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.51
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.51
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.51
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.51
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.51
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.51
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.51
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.51
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.51
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.5
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.5
PHA03212	391	serine/threonine kinase US3; Provisional	99.5
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.5
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.5
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.5
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.5
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.5
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.5
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.5
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.5
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.5
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.5
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.49
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.49
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.49
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.49
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.49
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.49
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.49
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.49
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.49
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.48
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.48
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.48
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.48
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.48
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.48
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.48
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.48
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.48
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.48
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.48
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.47
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.47
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.47
PHA03209	357	serine/threonine kinase US3; Provisional	99.47
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.47
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.47
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.47
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.47
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.47
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.47
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.47
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.47
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.47
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.47
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.46
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.46
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.46
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.46
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.46
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.46
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.46
PHA03211	461	serine/threonine kinase US3; Provisional	99.46
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.46
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.46
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.46
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.46
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.46
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.46
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.45
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.45
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.45
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.45
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.45
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.45
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.45
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.45
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.45
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.45
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.45
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.45
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.45
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.45
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.45
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.45
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.44
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.44
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.44
PHA03207	392	serine/threonine kinase US3; Provisional	99.44
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.44
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.44
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.44
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.44
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.44
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.44
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.44
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.43
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.43
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.43
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.43
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.43
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.43
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.43
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.42
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.42
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.42
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.42
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.42
KOG3653	534	consensus Transforming growth factor beta/activin	99.41
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.41
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.41
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.41
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.41
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.41
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.41
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.41
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.41
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.4
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.4
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.4
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.4
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.4
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.4
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.4
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.4
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.4
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.4
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.4
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.39
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.39
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.39
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.39
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.39
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.39
PLN00009	294	cyclin-dependent kinase A; Provisional	99.39
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.38
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.38
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.38
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.38
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.38
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.38
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.38
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.38
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.38
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.37
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.37
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.37
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.36
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.35
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.35
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.35
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.35
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.35
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.35
PTZ00036	440	glycogen synthase kinase; Provisional	99.34
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.34
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.33
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.33
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.31
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.31
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.31
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.31
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.3
PTZ00283	496	serine/threonine protein kinase; Provisional	99.3
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.3
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.3
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.29
PRK10345	210	hypothetical protein; Provisional	99.29
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.29
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.28
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.28
KOG1152	772	consensus Signal transduction serine/threonine kin	99.28
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.27
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.27
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.27
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.25
PHA03210	501	serine/threonine kinase US3; Provisional	99.25
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.25
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.24
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.24
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.24
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.24
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.23
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.23
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.23
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.23
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.23
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.23
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.22
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.22
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.22
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.21
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.2
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.19
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.19
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.19
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.19
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.19
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.19
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.18
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.18
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.17
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.17
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.15
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.14
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.13
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.13
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.13
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.13
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.12
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.11
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.11
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.11
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.1
PTZ00284	467	protein kinase; Provisional	99.09
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.08
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.05
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.03
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.01
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.95
PLN00181	793	protein SPA1-RELATED; Provisional	98.93
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.93
PHA02882	294	putative serine/threonine kinase; Provisional	98.9
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.86
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.85
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.84
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.81
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.79
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.79
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.78
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.77
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.77
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.76
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.74
PRK14879	211	serine/threonine protein kinase; Provisional	98.74
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.74
PRK09188	365	serine/threonine protein kinase; Provisional	98.68
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.68
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.67
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.66
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	98.66
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.6
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.59
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	98.57
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.55
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.54
smart00090	237	RIO RIO-like kinase.	98.46
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	98.39
PRK12274	218	serine/threonine protein kinase; Provisional	98.39
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.38
KOG1243	690	consensus Protein kinase [General function predict	98.29
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	98.28
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.28
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.25
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.19
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.06
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.05
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.01
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.77
KOG3087	229	consensus Serine/threonine protein kinase [General	97.72
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.71
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.69
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.57
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.53
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.47
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	97.39
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.31
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	97.24
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.19
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.13
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.36
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	95.87
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	95.68
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.52
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	95.38
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	95.37
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	94.52
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	94.17
PRK09902	216	hypothetical protein; Provisional	93.83
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	93.68
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	93.22
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	93.08
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	92.15
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	89.57
KOG1235	538	consensus Predicted unusual protein kinase [Genera	89.28
KOG0606	1205	consensus Microtubule-associated serine/threonine	87.61
COG0478	304	RIO-like serine/threonine protein kinase fused to	87.6
PLN02876	822	acyl-CoA dehydrogenase	80.48

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.85  E-value=2e-20  Score=98.76  Aligned_cols=69  Identities=26%  Similarity=0.470  Sum_probs=65.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|||++++++.+++.++++||||.+|+|..+++..+.   +++.....+..|++.|+.+||++   +||||||
T Consensus        67 ~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~---l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDL  135 (429)
T KOG0595|consen   67 KHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGR---LPEATARHFMQQLASALQFLHEN---NIIHRDL  135 (429)
T ss_pred             CCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeeccC
Confidence            599999999999999999999999999999999988654   89999999999999999999999   9999997

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=4.5e-20  Score=97.82  Aligned_cols=74  Identities=43%  Similarity=0.793  Sum_probs=67.2

Q ss_pred             CCCceeeEeeEEeeCC-eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK-CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||+++++|+|.+.+ ...+++||+++|+|.+.+...... .++|.....++.+++.|+.|||..+.|+|+|||+
T Consensus       129 ~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDi  203 (361)
T KOG1187|consen  129 RHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDI  203 (361)
T ss_pred             CCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCC
Confidence            5999999999999988 599999999999999999764432 4899999999999999999999999889999996

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=7.1e-20  Score=98.51  Aligned_cols=71  Identities=31%  Similarity=0.580  Sum_probs=64.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++|++++++|..++.+++++|||+.|+|.++++.... ..+...+.+.++.||+.||.||.++   .+|||||
T Consensus       259 ~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~-~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDL  329 (468)
T KOG0197|consen  259 RHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREG-GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDL  329 (468)
T ss_pred             cccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCC-CccchHHHHHHHHHHHHHHHHHHhC---Cccchhh
Confidence            599999999999998999999999999999999987322 2388889999999999999999999   9999997

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=1.4e-19  Score=98.98  Aligned_cols=69  Identities=29%  Similarity=0.505  Sum_probs=64.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||++++++|.+.+.+|++.|+|..+++...++....   +.++++..+..||+.|+.|||+.   +|+||||
T Consensus        76 ~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~---ltEpEary~l~QIv~GlkYLH~~---~IiHRDL  144 (592)
T KOG0575|consen   76 KHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKP---LTEPEARYFLRQIVEGLKYLHSL---GIIHRDL  144 (592)
T ss_pred             CCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCC---CCcHHHHHHHHHHHHHHHHHHhc---Cceeccc
Confidence            599999999999999999999999999999999885443   99999999999999999999999   9999997

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.80  E-value=6.9e-19  Score=93.29  Aligned_cols=71  Identities=37%  Similarity=0.635  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCC-eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCC-eEeccC
Q 039179            1 QHQNIVKLYGFCLHKK-CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPS-IIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-i~hrdl   75 (75)
                      +||||++++|++.++. .+.+++||+++|++..++... ....++...+..++.+++.||.|||++   . ||||||
T Consensus        97 ~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDL  169 (362)
T KOG0192|consen   97 RHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDL  169 (362)
T ss_pred             CCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeeccc
Confidence            5999999999999887 799999999999999999763 122389999999999999999999999   7 999997

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.80  E-value=4.7e-19  Score=95.98  Aligned_cols=70  Identities=29%  Similarity=0.465  Sum_probs=65.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||++++|++....++++++|+|.+|+|.+++++...  .++..+...++.+.+.||.|||..   .++||||
T Consensus       219 ~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDI  288 (474)
T KOG0194|consen  219 NHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDI  288 (474)
T ss_pred             CCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhH
Confidence            699999999999999999999999999999999987543  288888999999999999999999   9999996

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.78  E-value=1.3e-18  Score=92.36  Aligned_cols=69  Identities=29%  Similarity=0.397  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++.+++..+...|+++||+.+|.+.+++...+.   +.+.....++.|++.++.|||++   +|+||||
T Consensus       234 ~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~---GI~HRDi  302 (475)
T KOG0615|consen  234 SHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDI  302 (475)
T ss_pred             CCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHc---CcccccC
Confidence            599999999999999999999999999999999977554   77777888999999999999999   9999997

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.78  E-value=2.7e-18  Score=89.80  Aligned_cols=69  Identities=35%  Similarity=0.448  Sum_probs=63.3

Q ss_pred             CCCceeeEeeEEeeCC-eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK-CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +||+|++++++|..++ .+.++||||.+|+|+...+..+.   +++.....++.+++.|+.|||+ .   .|+|||+
T Consensus       135 ~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~---i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDI  205 (364)
T KOG0581|consen  135 QSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGR---IPEPVLGKIARAVLRGLSYLHEER---KIIHRDI  205 (364)
T ss_pred             CCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhhcc---CeeeccC
Confidence            5899999999999999 59999999999999999987544   8999999999999999999996 6   9999996

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.75  E-value=4.8e-18  Score=93.88  Aligned_cols=69  Identities=32%  Similarity=0.572  Sum_probs=64.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++.|+|.....++++||||..|-|...++..+.   +.......+..+|+.||.|||..   .||||||
T Consensus       170 kH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~---itp~llv~Wsk~IA~GM~YLH~h---KIIHRDL  238 (904)
T KOG4721|consen  170 KHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRP---ITPSLLVDWSKGIAGGMNYLHLH---KIIHRDL  238 (904)
T ss_pred             cCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCc---cCHHHHHHHHHHhhhhhHHHHHh---hHhhhcc
Confidence            599999999999999999999999999999999987554   88888999999999999999999   9999997

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.75  E-value=1.6e-17  Score=93.55  Aligned_cols=72  Identities=31%  Similarity=0.564  Sum_probs=64.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-----------cccCCHHhHHHHHHHHHHHhhHhhhCCCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-----------ALELNWTNNVNIAKCVAHALSYLHHHCTPS   69 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~   69 (75)
                      +|+|||+++|+|..++.+++++|||..|+|..+++...+           +.++...+.+.++.||+.||.||.+.   .
T Consensus       547 ~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~  623 (774)
T KOG1026|consen  547 QHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---H  623 (774)
T ss_pred             cCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---c
Confidence            699999999999999999999999999999999985321           12367788899999999999999999   9


Q ss_pred             eEeccC
Q 039179           70 IIYRDI   75 (75)
Q Consensus        70 i~hrdl   75 (75)
                      ++||||
T Consensus       624 FVHRDL  629 (774)
T KOG1026|consen  624 FVHRDL  629 (774)
T ss_pred             ccccch
Confidence            999997

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.74  E-value=3.4e-17  Score=89.33  Aligned_cols=69  Identities=30%  Similarity=0.435  Sum_probs=65.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .||.|++|+-.|.++..+|+++||+++|.+..++++-+.   +.+.....++.+++.++.|||++   +||||||
T Consensus       132 ~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gs---fde~caR~YAAeIldAleylH~~---GIIHRDl  200 (604)
T KOG0592|consen  132 GHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGS---FDETCARFYAAEILDALEYLHSN---GIIHRDL  200 (604)
T ss_pred             CCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHhc---CceeccC
Confidence            589999999999999999999999999999999988665   99999999999999999999999   9999997

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=5.8e-17  Score=86.35  Aligned_cols=68  Identities=21%  Similarity=0.380  Sum_probs=63.8

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ||||++++.++..+..++++|||+.+|.+.+.+...+.   +.+..+..++.|++.|+.|+|..   +|+||||
T Consensus        79 HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~---l~E~~ar~~F~Qlisav~y~H~~---gi~HRDL  146 (370)
T KOG0583|consen   79 HPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGR---LKEDEARKYFRQLISAVAYCHSR---GIVHRDL  146 (370)
T ss_pred             CCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCC---CChHHHHHHHHHHHHHHHHHHhC---CEeeCCC
Confidence            99999999999999999999999999999999987443   88899999999999999999999   9999997

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.72  E-value=3.5e-17  Score=87.03  Aligned_cols=71  Identities=27%  Similarity=0.354  Sum_probs=65.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||++.+++..+.++...+++||||++|++....+++ ....+++..+.+++..+..++.|||..   +||+|||
T Consensus       135 DHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQ-p~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDL  205 (459)
T KOG0610|consen  135 DHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQ-PGKRFSESAARFYAAEVLLALEYLHML---GIVYRDL  205 (459)
T ss_pred             CCCccchhhheeeccceeEEEEecCCCccHHHHHhhC-CCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccC
Confidence            5999999999999999999999999999999888763 334489999999999999999999999   9999997

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.72  E-value=3.8e-17  Score=90.02  Aligned_cols=71  Identities=25%  Similarity=0.414  Sum_probs=64.3

Q ss_pred             CCCceeeEeeEEeeCCe--EEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKC--MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~--~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||++++.++.+...  +.+++|+++.|+|..+.++.+.   +....+..|+.||+.|+.|||++ .|+||||||
T Consensus        99 ~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDL  171 (632)
T KOG0584|consen   99 KHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDL  171 (632)
T ss_pred             CCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcC-CCCcccccc
Confidence            59999999999988654  8899999999999999988765   78889999999999999999997 667999996

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.72  E-value=8.7e-17  Score=84.16  Aligned_cols=69  Identities=29%  Similarity=0.444  Sum_probs=65.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||+|++++-+|++++.+|+++||+.+|.|...+...+.   +.+..+..++..++.|+.|||+.   +|+|||+
T Consensus        83 ~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH~~---gIiyRDl  151 (357)
T KOG0598|consen   83 KHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLHSK---GIIYRDL  151 (357)
T ss_pred             CCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHHhC---CeeeccC
Confidence            599999999999999999999999999999999987554   89999999999999999999999   9999997

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=8.6e-17  Score=86.34  Aligned_cols=71  Identities=27%  Similarity=0.353  Sum_probs=64.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||++++.+|..+.++|++|.||.+|++.+.++..-. .++.+..+..++.+++.|+.|||.+   +-||||+
T Consensus        82 ~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdv  152 (516)
T KOG0582|consen   82 DHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQN---GHIHRDV  152 (516)
T ss_pred             CCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhc---Cceeccc
Confidence            599999999999999999999999999999999987432 2388999999999999999999999   9999996

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.70  E-value=3e-16  Score=80.97  Aligned_cols=69  Identities=32%  Similarity=0.518  Sum_probs=65.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .||+++++++.+.+...++++|||.++|.+..++++.+.   ++++.+..++.+++.++.|+|..   .|++|||
T Consensus       102 ~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH~~---~iiYRDL  170 (355)
T KOG0616|consen  102 SHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLHSL---DIIYRDL  170 (355)
T ss_pred             cCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHHhc---CeeeccC
Confidence            489999999999999999999999999999999988665   99999999999999999999999   9999996

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.70  E-value=9e-17  Score=92.84  Aligned_cols=72  Identities=31%  Similarity=0.517  Sum_probs=65.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC----cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE----ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||++++|.|.+.+..++++|||.+|+|..++++.+.    ...+...+.+.++.+++.|+.||+++   .+|||||
T Consensus       753 ~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDL  828 (1025)
T KOG1095|consen  753 DHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDL  828 (1025)
T ss_pred             CCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcch
Confidence            599999999999999999999999999999999997521    23478889999999999999999999   9999997

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.69  E-value=4.6e-16  Score=79.90  Aligned_cols=70  Identities=23%  Similarity=0.432  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..+...++++||+++|++..++.....  .++......++.|++.|+.|+|+.   +++||||
T Consensus        74 ~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dl  143 (274)
T cd05076          74 SHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLEDK---NLVHGNV  143 (274)
T ss_pred             CCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCC
Confidence            589999999999999999999999999999988865332  277888889999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=9.1e-16  Score=81.71  Aligned_cols=69  Identities=20%  Similarity=0.255  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+.++...++++||+++|++...+.....   ++...+..++.|++.|+.|||..   +++||||
T Consensus        59 ~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH~~---givHrDl  127 (377)
T cd05629          59 DSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDT---FSEDVTRFYMAECVLAIEAVHKL---GFIHRDI  127 (377)
T ss_pred             CCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeeccCC
Confidence            589999999999999999999999999999998865433   78888888999999999999999   9999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.68  E-value=2e-16  Score=85.04  Aligned_cols=69  Identities=19%  Similarity=0.407  Sum_probs=65.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||++++.+|.+...+.++|||..+|.|++++.+.+.   +++.+...++.||..++.|.|.+   +++||||
T Consensus       111 NHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~---LsErEaRhfFRQIvSAVhYCHkn---rVvHRDL  179 (668)
T KOG0611|consen  111 NHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGS---LSEREARHFFRQIVSAVHYCHKN---RVVHRDL  179 (668)
T ss_pred             CCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHhhc---cceeccc
Confidence            599999999999999999999999999999999987665   99999999999999999999999   9999996

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.68  E-value=4e-16  Score=81.45  Aligned_cols=70  Identities=26%  Similarity=0.376  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCC--eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK--CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~--~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||++++|.....+  ...+++||+++|++.+++...+.  .++++.+..++.+++.|+.|+|++   +++||||
T Consensus        72 ~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~Di  143 (313)
T KOG0198|consen   72 NHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDI  143 (313)
T ss_pred             CCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCc
Confidence            3899999999855544  68999999999999999987653  289999999999999999999999   9999997

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.67  E-value=4.2e-16  Score=86.90  Aligned_cols=69  Identities=23%  Similarity=0.453  Sum_probs=65.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++++.+...+|++.||+++|.+.+++...+.   +++.+...++.|+..|+.|.|..   +|+|||+
T Consensus        70 ~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~---l~e~eaa~ff~QIi~gv~yCH~~---~icHRDL  138 (786)
T KOG0588|consen   70 EHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGP---LPEREAAHFFRQILDGVSYCHAF---NICHRDL  138 (786)
T ss_pred             cCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHhhh---cceeccC
Confidence            599999999999999999999999999999999987665   99999999999999999999999   9999996

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.67  E-value=1.2e-15  Score=80.53  Aligned_cols=69  Identities=20%  Similarity=0.409  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+.+|++...+.....   ++...+..++.|++.++.|+|..   +++||||
T Consensus        89 ~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDL  157 (340)
T PTZ00426         89 NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKR---FPNDVGCFYAAQIVLIFEYLQSL---NIVYRDL  157 (340)
T ss_pred             CCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEccCC
Confidence            589999999999999999999999999999999876443   78888889999999999999999   9999996

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=5.4e-17  Score=88.51  Aligned_cols=68  Identities=32%  Similarity=0.495  Sum_probs=62.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+.+++.+...+.+|++|||+.+|++.+.+....    +.+.++..++..++.|+.|||.+   +|+||||
T Consensus       328 ~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDI  395 (550)
T KOG0578|consen  328 HHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHAR---GIIHRDI  395 (550)
T ss_pred             cchHHHHHHHHhcccceeEEEEeecCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhc---ceeeecc
Confidence            59999999999999999999999999999988886533    88999999999999999999999   9999997

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.67  E-value=1.5e-15  Score=79.76  Aligned_cols=69  Identities=23%  Similarity=0.418  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++||+++|++...+.....   ++...+..++.|++.|+.|+|..   +++||||
T Consensus        54 ~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dl  122 (329)
T cd05588          54 NHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRK---LPEEHARFYSAEISLALNFLHER---GIIYRDL  122 (329)
T ss_pred             CCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEecCC
Confidence            489999999999999999999999999999888765433   88889999999999999999999   9999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.67  E-value=1.8e-15  Score=79.25  Aligned_cols=71  Identities=21%  Similarity=0.283  Sum_probs=62.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++||+++|++.+++..... ..+++..+..++.|++.|+.|+|..   +++|||+
T Consensus        57 ~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dl  127 (327)
T cd08227          57 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSV  127 (327)
T ss_pred             CCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCC
Confidence            599999999999999999999999999999998865322 1278888899999999999999999   9999996

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.66  E-value=1.6e-15  Score=80.49  Aligned_cols=69  Identities=20%  Similarity=0.291  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++|+++++.+.++...++++||+++|++...+.....   ++...+..++.|++.|+.|+|+.   +|+||||
T Consensus        59 ~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~~---givHrDl  127 (363)
T cd05628          59 DSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDT---LTEEETQFYIAETVLAIDSIHQL---GFIHRDI  127 (363)
T ss_pred             CCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeEecCC
Confidence            489999999999999999999999999999999876443   88889999999999999999999   9999997

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.66  E-value=1.6e-16  Score=89.90  Aligned_cols=70  Identities=29%  Similarity=0.491  Sum_probs=64.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||++|-|+......++++.|||++|+|+.+++.....  +...++..++.+|+.||.||.+.   +.+||||
T Consensus       688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq--ftviQLVgMLrGIAsGMkYLsdm---~YVHRDL  757 (996)
T KOG0196|consen  688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIASGMKYLSDM---NYVHRDL  757 (996)
T ss_pred             CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc--eEeehHHHHHHHHHHHhHHHhhc---Cchhhhh
Confidence            5999999999999999999999999999999999985543  78888899999999999999999   9999996

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.66  E-value=1.8e-15  Score=77.31  Aligned_cols=70  Identities=24%  Similarity=0.406  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++.+.+..++..++++||+++|++..++.....  .+++.....++.+++.|+.|+|+.   +++|||+
T Consensus        64 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~~---~iiH~di  133 (266)
T cd05064          64 DHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSEM---GYVHKGL  133 (266)
T ss_pred             CCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccc
Confidence            599999999999999999999999999999998875322  278888999999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=1.6e-15  Score=80.39  Aligned_cols=69  Identities=22%  Similarity=0.319  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+.++...++++||+++|++...+.....   ++...+..++.|++.|+.|+|..   +++||||
T Consensus        59 ~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dl  127 (364)
T cd05599          59 DNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDT---FTEEETRFYIAETILAIDSIHKL---GYIHRDI  127 (364)
T ss_pred             CCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeccC
Confidence            489999999999999999999999999999998875433   88888999999999999999999   9999996

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.66  E-value=2.3e-15  Score=78.93  Aligned_cols=69  Identities=23%  Similarity=0.340  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++.+.+..++..++++||+++|++...+.....   +++..+..++.+++.|+.|+|+.   +++||||
T Consensus        53 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dl  121 (323)
T cd05595          53 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHSR---DVVYRDI  121 (323)
T ss_pred             CCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEecCC
Confidence            489999999999999999999999999999888765433   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.65  E-value=2.3e-15  Score=78.74  Aligned_cols=69  Identities=23%  Similarity=0.444  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..+...++++||+++|++...+.....   ++...+..++.|++.|+.|||..   +++||||
T Consensus        54 ~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~---~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl  122 (316)
T cd05592          54 EHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGR---FDEARARFYAAEIICGLQFLHKK---GIIYRDL  122 (316)
T ss_pred             CCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEEeCCC
Confidence            489999999999999999999999999999988865433   78888889999999999999999   9999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=2.5e-15  Score=78.37  Aligned_cols=69  Identities=22%  Similarity=0.327  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++.+.+..++..++++||+++|++...+.....   +.......++.|++.|+.|+|..   +++||||
T Consensus        51 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDl  119 (312)
T cd05585          51 NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGR---FDLSRARFYTAELLCALENLHKF---NVIYRDL  119 (312)
T ss_pred             CCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeEeCCC
Confidence            589999999999999999999999999999998876433   78888889999999999999999   9999996

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.65  E-value=2.4e-15  Score=78.55  Aligned_cols=69  Identities=30%  Similarity=0.330  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++||+.+|++...+.....   +++..+..++.|++.|+.|+|+.   +++||||
T Consensus        56 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  124 (318)
T cd05582          56 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLHSL---GIIYRDL  124 (318)
T ss_pred             CCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEecCCC
Confidence            589999999999999999999999999999988865433   78888999999999999999999   9999996

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.65  E-value=2.8e-15  Score=79.97  Aligned_cols=69  Identities=19%  Similarity=0.262  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+.++...++++||+++|++...+.....   ++...+..++.|++.|+.|+|..   +|+||||
T Consensus        59 ~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~al~~lH~~---~ivHrDl  127 (382)
T cd05625          59 DNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI---FPEDLARFYIAELTCAVESVHKM---GFIHRDI  127 (382)
T ss_pred             CCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            489999999999999999999999999999998865433   77888888999999999999999   9999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.65  E-value=3.1e-15  Score=79.62  Aligned_cols=69  Identities=20%  Similarity=0.275  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++||+++|++...+.....   ++...+..++.|++.|+.|+|..   +|+||||
T Consensus        59 ~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~---~~~~~~~~~~~qi~~al~~lH~~---~ivHrDl  127 (376)
T cd05598          59 DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGI---FEEDLARFYIAELTCAIESVHKM---GFIHRDI  127 (376)
T ss_pred             CCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCC
Confidence            489999999999999999999999999999999876433   77888888899999999999999   9999997

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.65  E-value=3.3e-15  Score=78.14  Aligned_cols=69  Identities=23%  Similarity=0.464  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.+++..++++||+++|++...+.....   ++......++.|++.|+.|+|..   +++|||+
T Consensus        54 ~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~LH~~---~ivHrdi  122 (316)
T cd05619          54 EHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHK---FDLPRATFYAAEIICGLQFLHSK---GIVYRDL  122 (316)
T ss_pred             CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeEeCCC
Confidence            489999999999999999999999999999998875433   78888889999999999999999   9999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.65  E-value=3.3e-15  Score=78.29  Aligned_cols=69  Identities=22%  Similarity=0.326  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++.+.+..++..++++||+++|++...+.....   +.+..+..++.|++.|+.|+|+.   +++||||
T Consensus        53 ~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDl  121 (323)
T cd05571          53 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALGYLHSC---DVVYRDL  121 (323)
T ss_pred             CCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeEeCCC
Confidence            489999999999999999999999999999888865433   78888889999999999999999   9999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.65  E-value=3.7e-15  Score=79.55  Aligned_cols=69  Identities=20%  Similarity=0.273  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+.++...++++||+++|++...+.....   ++...+..++.|++.|+.|+|..   +|+||||
T Consensus        59 ~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~aL~~LH~~---givHrDl  127 (381)
T cd05626          59 DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEV---FPEVLARFYIAELTLAIESVHKM---GFIHRDI  127 (381)
T ss_pred             CCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeeecCC
Confidence            589999999999999999999999999999998865433   77888888999999999999999   9999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.65  E-value=3.4e-15  Score=78.23  Aligned_cols=69  Identities=26%  Similarity=0.391  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++||+.+|++...+.....   ++...+..++.|++.|+.|+|+.   +++||||
T Consensus        54 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~---givH~Dl  122 (325)
T cd05604          54 KHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERS---FPEPRARFYAAEIASALGYLHSI---NIVYRDL  122 (325)
T ss_pred             CCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeecCC
Confidence            589999999999999999999999999999888765433   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.65  E-value=3e-15  Score=76.48  Aligned_cols=70  Identities=29%  Similarity=0.524  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+...++++|+++++++..++.....  .+.......++.|++.|+.|+|+.   +++|||+
T Consensus        62 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dl  131 (262)
T cd05077          62 SHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLEDK---DLVHGNV  131 (262)
T ss_pred             CCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCC
Confidence            599999999999988889999999999999888764332  278888899999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.64  E-value=3.2e-15  Score=78.54  Aligned_cols=69  Identities=23%  Similarity=0.347  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++||+.+|++...+.....   ++...+..++.|++.|+.|+|+.   +++||||
T Consensus        76 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dl  144 (329)
T PTZ00263         76 SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGR---FPNDVAKFYHAELVLAFEYLHSK---DIIYRDL  144 (329)
T ss_pred             CCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeecCC
Confidence            589999999999999999999999999999998876433   77888888999999999999999   9999996

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.64  E-value=3.7e-15  Score=78.33  Aligned_cols=69  Identities=26%  Similarity=0.447  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++||+++|++...+.....   ++......++.+++.|+.|+|..   +++||||
T Consensus        54 ~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Di  122 (329)
T cd05618          54 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHER---GIIYRDL  122 (329)
T ss_pred             CCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeeCCC
Confidence            489999999999999999999999999999888765433   88888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.64  E-value=3.9e-15  Score=77.99  Aligned_cols=69  Identities=29%  Similarity=0.404  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++||+.+|++...+.....   +.......++.|++.|+.|+|..   +++||||
T Consensus        54 ~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---givH~di  122 (323)
T cd05575          54 KHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERS---FPEPRARFYAAEIASALGYLHSL---NIIYRDL  122 (323)
T ss_pred             CCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCC
Confidence            489999999999999999999999999999888865433   78888888999999999999999   9999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.64  E-value=3.7e-15  Score=77.96  Aligned_cols=69  Identities=29%  Similarity=0.378  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++.+.+.+++..++++||++++++...+.....   +....+..++.|++.|+.|+|..   +++||||
T Consensus        54 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dl  122 (321)
T cd05603          54 KHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERC---FLEPRARFYAAEVASAIGYLHSL---NIIYRDL  122 (321)
T ss_pred             CCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeccC
Confidence            589999999999999999999999999999887765333   77888888999999999999999   9999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.64  E-value=4.4e-15  Score=79.16  Aligned_cols=68  Identities=21%  Similarity=0.309  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++.+.++...++++||+++|++...+... .   ++......++.+++.|+.|+|..   +++||||
T Consensus       101 ~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~---~~~~~~~~~~~qil~aL~~LH~~---~IvHrDL  168 (370)
T cd05621         101 NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-D---VPEKWAKFYTAEVVLALDAIHSM---GLIHRDV  168 (370)
T ss_pred             CCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc-C---CCHHHHHHHHHHHHHHHHHHHHC---CeEecCC
Confidence            5899999999999999999999999999999988643 2   77888889999999999999999   9999997

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.64  E-value=1.4e-16  Score=83.26  Aligned_cols=69  Identities=28%  Similarity=0.488  Sum_probs=64.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .|+||++++++|.++..+|+++|.|.+|++...+.+...   +.+.+...++..++.++.|||..   +|.|||+
T Consensus       134 gh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~---F~E~EAs~vvkdia~aLdFlH~k---gIAHRDl  202 (463)
T KOG0607|consen  134 GHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKH---FNEREASRVVKDIASALDFLHTK---GIAHRDL  202 (463)
T ss_pred             CCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhh---ccHHHHHHHHHHHHHHHHHHhhc---CcccccC
Confidence            489999999999999999999999999999999987655   89999999999999999999999   9999996

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.64  E-value=3e-15  Score=78.39  Aligned_cols=69  Identities=25%  Similarity=0.446  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++++...+..++++||+++|++...+.....   ++...+..++.|++.|+.|+|..   +++||||
T Consensus        54 ~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~---l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dl  122 (320)
T cd05590          54 NHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR---FDEARARFYAAEITSALMFLHDK---GIIYRDL  122 (320)
T ss_pred             CCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCC
Confidence            489999999999999999999999999999988865433   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.64  E-value=2.8e-15  Score=81.78  Aligned_cols=69  Identities=23%  Similarity=0.312  Sum_probs=64.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +++.+++++-+|.+...+|++|||.+||++..++...+.   +++..+..++.+++.|+..+|..   ++|||||
T Consensus       199 ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~---L~e~~arfYiaE~vlAI~~iH~~---gyIHRDI  267 (550)
T KOG0605|consen  199 DSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDT---LTEDWARFYIAETVLAIESIHQL---GYIHRDI  267 (550)
T ss_pred             CCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCc---CchHHHHHHHHHHHHHHHHHHHc---CcccccC
Confidence            468999999999999999999999999999999987665   89999999999999999999999   9999997

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.64  E-value=5.3e-15  Score=81.01  Aligned_cols=72  Identities=21%  Similarity=0.244  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++||+++|+|...+... .....+....+..++.|++.|+.|+|..   +++||||
T Consensus       123 ~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDl  195 (478)
T PTZ00267        123 DHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDL  195 (478)
T ss_pred             CCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCc
Confidence            5999999999999999999999999999998877542 1122377788888999999999999999   9999997

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.64  E-value=4.1e-15  Score=77.83  Aligned_cols=69  Identities=26%  Similarity=0.447  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++||++++++...+.....   +.+.....++.+++.|+.|+|..   +++||||
T Consensus        54 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDi  122 (321)
T cd05591          54 KHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRK---FDEPRSRFYAAEVTLALMFLHRH---GVIYRDL  122 (321)
T ss_pred             CCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            489999999999999999999999999999888865443   78888889999999999999999   9999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.64  E-value=5.6e-15  Score=78.34  Aligned_cols=69  Identities=20%  Similarity=0.310  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++++.+.+++..++++||+++|++...+.....   ++...+..++.+++.|+.|+|..   +++||||
T Consensus        59 ~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~~L~~lH~~---givHrDL  127 (360)
T cd05627          59 DGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDT---LSEEATQFYIAETVLAIDAIHQL---GFIHRDI  127 (360)
T ss_pred             CCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEccCC
Confidence            489999999999999999999999999999999876443   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.63  E-value=1.8e-16  Score=88.84  Aligned_cols=71  Identities=30%  Similarity=0.509  Sum_probs=63.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||+++++|+|..+..+|++.|||..|+|.+++++.... .++.-.++.++.||..+|.||...   .+|||||
T Consensus       321 kHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDL  391 (1157)
T KOG4278|consen  321 KHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKK---NFIHRDL  391 (1157)
T ss_pred             cCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhh
Confidence            5999999999999999999999999999999999885432 266667788899999999999999   9999996

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.63  E-value=5.7e-15  Score=77.60  Aligned_cols=69  Identities=25%  Similarity=0.358  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++.+.+..++..++++||+++|++...+.....   +.+..+..++.|++.|+.|||..   +++||||
T Consensus        53 ~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDi  121 (328)
T cd05593          53 RHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERV---FSEDRTRFYGAEIVSALDYLHSG---KIVYRDL  121 (328)
T ss_pred             CCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeEeccc
Confidence            489999999999999999999999999999888765433   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.63  E-value=5.5e-15  Score=77.29  Aligned_cols=69  Identities=22%  Similarity=0.443  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++++.+..++..++++||+.+|++...+.....   ++......++.|++.|+.|+|..   +++||||
T Consensus        54 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDl  122 (316)
T cd05620          54 ENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGR---FDLYRATFYAAEIVCGLQFLHSK---GIIYRDL  122 (316)
T ss_pred             CCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEecCC
Confidence            489999999999999999999999999999988865433   78888889999999999999999   9999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.63  E-value=5e-15  Score=75.60  Aligned_cols=71  Identities=41%  Similarity=0.666  Sum_probs=59.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+...+..++++|+++.|++..++..... ..++......++.+++.|+.|||+.   +++|+++
T Consensus        59 ~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l  129 (259)
T PF07714_consen   59 RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNK-EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNL  129 (259)
T ss_dssp             SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT-TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred             ccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccc---ccccccc
Confidence            599999999999988889999999999999999987511 2288889999999999999999999   9999986

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.63  E-value=6.3e-15  Score=77.26  Aligned_cols=69  Identities=28%  Similarity=0.374  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++||+.++++...+.....   +.......++.|++.|+.|+|..   +++||||
T Consensus        54 ~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~L~~lH~~---giiHrDl  122 (325)
T cd05602          54 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC---FLEPRARFYAAEIASALGYLHSL---NIVYRDL  122 (325)
T ss_pred             CCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEecCC
Confidence            489999999999999999999999999999988865433   67777888899999999999999   9999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.63  E-value=8.6e-15  Score=76.88  Aligned_cols=69  Identities=25%  Similarity=0.410  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++++++......++++||+++|++...+.....   +++..+..++.|++.|+.|+|..   +++||||
T Consensus        54 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~al~~lH~~---~ivHrDl  122 (327)
T cd05617          54 SNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRK---LPEEHARFYAAEICIALNFLHER---GIIYRDL  122 (327)
T ss_pred             CCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            489999999999999999999999999999888765433   88889999999999999999999   9999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=5.5e-15  Score=77.65  Aligned_cols=69  Identities=19%  Similarity=0.226  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..+...++++||++++++..++.....   +....+..++.+++.|+.|+|..   +++||||
T Consensus        59 ~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dl  127 (333)
T cd05600          59 KSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGV---LSEDHARFYMAEMFEAVDALHEL---GYIHRDL  127 (333)
T ss_pred             CCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            489999999999999999999999999999999865433   78888889999999999999999   9999996

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.63  E-value=7.5e-15  Score=76.97  Aligned_cols=69  Identities=22%  Similarity=0.337  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +|+||+++.+.+..+...++++||+++|++...+.....   ++...+..++.|++.|+.|+|. .   +++||||
T Consensus        53 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDi  122 (325)
T cd05594          53 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEK---NVVYRDL  122 (325)
T ss_pred             CCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhcC---CEEecCC
Confidence            489999999999999999999999999999888765433   7888889999999999999997 7   8999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=6.9e-15  Score=77.21  Aligned_cols=69  Identities=26%  Similarity=0.301  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||+++++.+.+..+...++++||+.+|++...+.....   ++...+..++.|++.|+.|+|+.   +++||||
T Consensus        54 ~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qil~al~~LH~~---~ivHrDl  122 (330)
T cd05586          54 ESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGR---FSEDRAKFYIAELVLALEHLHKY---DIVYRDL  122 (330)
T ss_pred             CCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeccC
Confidence            489999999999999999999999999999888865433   88888999999999999999999   9999996

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.62  E-value=1.5e-15  Score=81.63  Aligned_cols=71  Identities=20%  Similarity=0.315  Sum_probs=64.7

Q ss_pred             CCCceeeEeeEEeeCCe-EEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKC-MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~-~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+.+.+.|..++. .+++|+|+.+|++.+.+.... ...+++..+..++-|++.++.|+|.+   .|+|||+
T Consensus        61 ~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDl  132 (426)
T KOG0589|consen   61 LHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDL  132 (426)
T ss_pred             cCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccc
Confidence            59999999999999888 999999999999999998754 23388999999999999999999999   9999996

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.62  E-value=4.7e-16  Score=80.09  Aligned_cols=69  Identities=25%  Similarity=0.408  Sum_probs=64.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .||+|+++.+++.++.++++++|.|+.|.+.+++.+...   +.+.....+..|+..|+.|+|.+   .|+||||
T Consensus        81 GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~Vt---lSEK~tR~iMrqlfegVeylHa~---~IVHRDL  149 (411)
T KOG0599|consen   81 GHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVT---LSEKETRRIMRQLFEGVEYLHAR---NIVHRDL  149 (411)
T ss_pred             CCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhhee---ecHHHHHHHHHHHHHHHHHHHHh---hhhhccc
Confidence            499999999999999999999999999999999977544   88889999999999999999999   9999996

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.62  E-value=8.3e-16  Score=77.39  Aligned_cols=71  Identities=32%  Similarity=0.518  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||.++++.|.+...+++++||.+.|++...++.... ..+.+.....+..|++.++.|+|..   +++|||+
T Consensus        80 ~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdi  150 (281)
T KOG0580|consen   80 RHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLK---RVIHRDI  150 (281)
T ss_pred             CCccHHhhhhheeccceeEEEEEecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccC---CcccCCC
Confidence            599999999999999999999999999999999985322 2388888899999999999999999   9999996

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.62  E-value=6.2e-15  Score=75.04  Aligned_cols=70  Identities=26%  Similarity=0.452  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++||+.+|++..++.....  .+.+.....++.|++.|+.|+|+.   +++|||+
T Consensus        57 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dl  126 (258)
T cd05078          57 SHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDK---GLTHGNV  126 (258)
T ss_pred             CCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            489999999999998899999999999999999875432  277888888999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.62  E-value=8.1e-15  Score=76.70  Aligned_cols=69  Identities=23%  Similarity=0.428  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+...+..++++||+++|++...+.....   +++.....++.+++.|+.|+|+.   +++||||
T Consensus        54 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dl  122 (318)
T cd05570          54 KHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGR---FDEPRARFYAAEIVLGLQFLHER---GIIYRDL  122 (318)
T ss_pred             CCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeEccCC
Confidence            489999999999999999999999999999888865433   88888999999999999999999   9999996

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.62  E-value=8.1e-15  Score=78.12  Aligned_cols=68  Identities=22%  Similarity=0.272  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++++.++...++++||+++|++...+... .   ++......++.+++.|+.|||+.   +++||||
T Consensus       101 ~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~---l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDL  168 (370)
T cd05596         101 NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY-D---IPEKWARFYTAEVVLALDAIHSM---GFIHRDV  168 (370)
T ss_pred             CCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc-C---CCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            5899999999999999999999999999999888642 2   77778888899999999999999   9999996

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.62  E-value=1.7e-14  Score=73.94  Aligned_cols=69  Identities=33%  Similarity=0.446  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++||++++++..++.....   +.+..+..++.|++.|+.++|+.   +++|||+
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  135 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGK---LSEAEVKKIIRQLVEALNDLHKH---NIIHNDI  135 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCC
Confidence            489999999999999999999999999999999876432   88999999999999999999999   9999986

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.62  E-value=5.1e-15  Score=85.96  Aligned_cols=69  Identities=39%  Similarity=0.741  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++||+++|++.++++.      +++.....++.+++.|+.|+|..+.++++|||+
T Consensus       741 ~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dl  809 (968)
T PLN00113        741 QHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNL  809 (968)
T ss_pred             CCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCC
Confidence            599999999999999999999999999999999853      777888899999999999999665669999996

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.62  E-value=1.6e-15  Score=85.62  Aligned_cols=73  Identities=25%  Similarity=0.347  Sum_probs=60.9

Q ss_pred             CCCceeeEeeE-EeeC------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEec
Q 039179            1 QHQNIVKLYGF-CLHK------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~-~~~~------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hr   73 (75)
                      .|+|||.|+++ ...+      .++++.||||.+|.|-+++....... |.+.+++.|+.+++.|+.+||.. +|+||||
T Consensus        93 gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~-~pPiIHR  170 (738)
T KOG1989|consen   93 GHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHR  170 (738)
T ss_pred             CCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcC-CCccchh
Confidence            49999999994 3221      36789999999999999998633322 99999999999999999999996 7789999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      ||
T Consensus       171 DL  172 (738)
T KOG1989|consen  171 DL  172 (738)
T ss_pred             hh
Confidence            97

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.62  E-value=8.1e-15  Score=76.83  Aligned_cols=69  Identities=28%  Similarity=0.358  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++||+.++++...+.....   +.......++.|++.|+.|+|+.   +++||||
T Consensus        58 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dl  126 (323)
T cd05584          58 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGI---FMEDTACFYLSEISLALEHLHQQ---GIIYRDL  126 (323)
T ss_pred             CCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            589999999999999999999999999999988865433   67777888899999999999999   9999996

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=1.1e-14  Score=76.58  Aligned_cols=70  Identities=19%  Similarity=0.199  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++.+++..++++||+.+|++..++.....  .++...+..++.|++.|+.|+|..   +++||||
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dl  128 (331)
T cd05597          59 DRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDI  128 (331)
T ss_pred             CCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCC
Confidence            489999999999999999999999999999999865322  278888889999999999999999   9999996

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.61  E-value=1.2e-14  Score=77.59  Aligned_cols=68  Identities=19%  Similarity=0.284  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++.+..+...++++||+++|++..++....    ++......++.+++.|+.|+|+.   +++||||
T Consensus       101 ~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDL  168 (371)
T cd05622         101 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD----VPEKWARFYTAEVVLALDAIHSM---GFIHRDV  168 (371)
T ss_pred             CCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHC---CEEeCCC
Confidence            48999999999999999999999999999999886432    77788888999999999999999   9999997

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=2.5e-15  Score=77.73  Aligned_cols=69  Identities=25%  Similarity=0.494  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.++...++++||+++|++..++.....   ++......++.+++.|+.|+|+.   +++||||
T Consensus        59 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  127 (291)
T cd05612          59 SHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGR---FSNSTGLFYASEIVCALEYLHSK---EIVYRDL  127 (291)
T ss_pred             CCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeecCC
Confidence            489999999999998999999999999999999876443   78888888999999999999999   9999996

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.61  E-value=1.1e-14  Score=76.31  Aligned_cols=68  Identities=28%  Similarity=0.531  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++||+.++++...+...    .+.......++.+++.|+.|+|+.   +++||||
T Consensus        60 ~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdl  127 (324)
T cd05589          60 RHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDL  127 (324)
T ss_pred             CCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCC
Confidence            4899999999999999999999999999998777542    288888999999999999999999   9999996

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.60  E-value=1.4e-14  Score=74.01  Aligned_cols=72  Identities=21%  Similarity=0.294  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCc--ccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEA--LELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+......++++|++++|++..++......  ..........++.|++.|+.|+|+.   +++|||+
T Consensus        53 ~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dl  126 (269)
T cd05042          53 NHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDL  126 (269)
T ss_pred             CCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccc
Confidence            5899999999999999999999999999999998763321  1134566778899999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=1.2e-15  Score=86.33  Aligned_cols=72  Identities=28%  Similarity=0.367  Sum_probs=64.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|.||+++.|++..++.+-++||-.++|++...++....+-.-.++.+..+.+||.+|+.|||++   .|+|||+
T Consensus       630 rHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDI  701 (1226)
T KOG4279|consen  630 RHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDI  701 (1226)
T ss_pred             hhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccc
Confidence            48999999999999999999999999999999998865542237888889999999999999999   9999996

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.60  E-value=1.7e-14  Score=75.76  Aligned_cols=69  Identities=23%  Similarity=0.266  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++.+.+..++..++++||+.+|++...+.....   ++...+..++.+++.|+.|+|+.   +++||||
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDl  131 (332)
T cd05614          63 QSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDN---FSEDEVRFYSGEIILALEHLHKL---GIVYRDI  131 (332)
T ss_pred             CCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcEecCC
Confidence            379999999999999999999999999999988865433   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.60  E-value=2.8e-14  Score=75.06  Aligned_cols=70  Identities=20%  Similarity=0.199  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++|+++.+.+.+++..++++||+++|++..++.....  .++......++.|++.|+.|+|..   +++||||
T Consensus        59 ~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDl  128 (331)
T cd05624          59 DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDI  128 (331)
T ss_pred             CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccC
Confidence            489999999999999999999999999999999875322  278888888999999999999999   9999996

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.59  E-value=1e-15  Score=84.84  Aligned_cols=71  Identities=30%  Similarity=0.512  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+.++++|..++.+.+++||+..|++.+++.++..+. ..-.....++.|++.||.||.+.   +|+|||+
T Consensus       593 khPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~  663 (807)
T KOG1094|consen  593 KHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDL  663 (807)
T ss_pred             CCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccc
Confidence            59999999999999999999999999999999998865432 33345577999999999999998   9999996

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.59  E-value=3.6e-14  Score=74.39  Aligned_cols=69  Identities=22%  Similarity=0.366  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++.+++...+..++++||+++|++...+.....   ++...+..++.+++.|+.|+|..   +++||||
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDl  127 (323)
T cd05616          59 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGR---FKEPHAVFYAAEIAIGLFFLHSK---GIIYRDL  127 (323)
T ss_pred             CCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEEecCC
Confidence            378899999999999999999999999999988865433   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.59  E-value=4.9e-14  Score=72.51  Aligned_cols=71  Identities=21%  Similarity=0.257  Sum_probs=61.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++.+.+..+...++++||++++++...+..... ..+.......++.|++.|+.|+|+.   +++|||+
T Consensus        51 ~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~di  121 (277)
T cd05607          51 NSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSM---DIVYRDM  121 (277)
T ss_pred             CCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccC
Confidence            589999999999999999999999999999887754332 2277778888999999999999999   9999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.59  E-value=1.1e-14  Score=80.39  Aligned_cols=69  Identities=25%  Similarity=0.424  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||++++.+...+..+++++||+.+|.+.+++.+++.   ...........|+..++.|+|+.   .|+||||
T Consensus       113 ~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k---~ivHrdL  181 (596)
T KOG0586|consen  113 NHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSK---NIVHRDL  181 (596)
T ss_pred             CCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhc---ceecccc
Confidence            599999999999999999999999999999999988665   55577788899999999999999   9999997

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=3.5e-14  Score=72.26  Aligned_cols=69  Identities=22%  Similarity=0.307  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++||++++++..++.....   ++...+..++.|++.|+.|+|+.   +++|+|+
T Consensus        55 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl  123 (260)
T cd05611          55 ESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGG---LPEDWAKQYIAEVVLGVEDLHQR---GIIHRDI  123 (260)
T ss_pred             CCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            489999999999998999999999999999999875433   78888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=9.8e-16  Score=86.09  Aligned_cols=70  Identities=23%  Similarity=0.357  Sum_probs=65.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||+|+++++.|...+.+|+..|||.+|.+...+...+..  +...++..++.+++.++.|||++   .||||||
T Consensus        87 dHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~--LtE~QIqvvc~q~ldALn~LHs~---~iIHRDL  156 (1187)
T KOG0579|consen   87 DHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRV--LTEDQIQVVCYQVLDALNWLHSQ---NIIHRDL  156 (1187)
T ss_pred             CChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccc--cchHHHHHHHHHHHHHHHHHhhc---chhhhhc
Confidence            5999999999999999999999999999999998876543  89999999999999999999999   9999996

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.59  E-value=4.8e-15  Score=82.93  Aligned_cols=72  Identities=29%  Similarity=0.369  Sum_probs=63.3

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|||++++.=.+..      ...++||||++|++...+.+..+..++++...+.++..+..|+.|||.+   +|+|||
T Consensus        69 nh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRD  145 (732)
T KOG4250|consen   69 NHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRD  145 (732)
T ss_pred             CchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---Cceecc
Confidence            4899999998754432      4579999999999999998877777799999999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       146 l  146 (732)
T KOG4250|consen  146 L  146 (732)
T ss_pred             C
Confidence            7

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.58  E-value=3.6e-14  Score=73.08  Aligned_cols=72  Identities=22%  Similarity=0.230  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++||+++|++...+... .....+++..+..++.|++.|+.|+|+.   +++||||
T Consensus        51 ~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  123 (280)
T cd05608          51 HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDL  123 (280)
T ss_pred             CCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            4899999999999989999999999999998776432 1222378888899999999999999999   9999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.58  E-value=4.6e-14  Score=74.24  Aligned_cols=70  Identities=20%  Similarity=0.199  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++.+.+.++...++++||+.+|++..++.....  .++...+..++.|++.++.|+|..   +++||||
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDl  128 (332)
T cd05623          59 DNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDI  128 (332)
T ss_pred             CCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCC
Confidence            489999999999999999999999999999999875322  278888888999999999999999   9999996

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.58  E-value=2.7e-14  Score=74.95  Aligned_cols=70  Identities=17%  Similarity=0.224  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.++...++++||+++|++..++.....  .++...+..++.|++.++.|+|..   +++||||
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dl  128 (330)
T cd05601          59 NSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDI  128 (330)
T ss_pred             CCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccC
Confidence            489999999999998999999999999999999876422  288888889999999999999999   9999996

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.58  E-value=3.2e-14  Score=74.67  Aligned_cols=71  Identities=24%  Similarity=0.289  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++|++.++++...+..... ..+++..+..++.|++.|+.|+|+.   +++|||+
T Consensus        57 ~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDl  127 (328)
T cd08226          57 RHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNI  127 (328)
T ss_pred             CCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            599999999999999999999999999999988875322 1277888888999999999999999   9999996

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.58  E-value=3.9e-14  Score=72.40  Aligned_cols=70  Identities=29%  Similarity=0.491  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++.+..++..++++|+++++++..++.....  .+.......++.+++.++.++|+.   +++|||+
T Consensus        63 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dl  132 (267)
T cd05066          63 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDL  132 (267)
T ss_pred             CCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhh
Confidence            589999999999988999999999999999999875332  267788889999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=3.3e-15  Score=83.27  Aligned_cols=68  Identities=28%  Similarity=0.490  Sum_probs=60.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||+++.++.+|.+.+.++.+|||..+|++...... +.   +.+..+..++..++.|+.|||++   +||||||
T Consensus       427 ~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~-~~---F~e~rarfyaAev~l~L~fLH~~---~IIYRDl  494 (694)
T KOG0694|consen  427 RHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHT-DV---FSEPRARFYAAEVVLGLQFLHEN---GIIYRDL  494 (694)
T ss_pred             cCCeEeecccccccCCeEEEEEEecCCCcEEEEEec-cc---ccHHHHHHHHHHHHHHHHHHHhc---Cceeeec
Confidence            599999999999999999999999999994433322 22   89999999999999999999999   9999996

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=4.2e-14  Score=73.01  Aligned_cols=71  Identities=21%  Similarity=0.253  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++||+.+|++...+..... ..+++..+..++.|++.|+.|+|+.   +++||||
T Consensus        58 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dl  128 (285)
T cd05605          58 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDL  128 (285)
T ss_pred             CCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCC
Confidence            489999999999998999999999999999887754322 2278888899999999999999999   9999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.58  E-value=3e-14  Score=74.75  Aligned_cols=68  Identities=21%  Similarity=0.361  Sum_probs=60.9

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |++++++.+++..++..++++||+++|++...+.....   +++..+..++.+++.|+.|+|..   +++|||+
T Consensus        60 ~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH~~---~ivHrDi  127 (323)
T cd05615          60 PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISVGLFFLHRR---GIIYRDL  127 (323)
T ss_pred             CCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            57788899999988999999999999999988866443   88889999999999999999999   9999996

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.58  E-value=6.2e-14  Score=72.38  Aligned_cols=71  Identities=18%  Similarity=0.220  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++.+.+..++..++++|++++|++...+..... ..++......++.|++.|+.|+|..   +++||||
T Consensus        58 ~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~di  128 (285)
T cd05631          58 NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDL  128 (285)
T ss_pred             CCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCC
Confidence            489999999999999999999999999999877754322 1278888889999999999999999   9999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.58  E-value=4.3e-14  Score=71.96  Aligned_cols=70  Identities=26%  Similarity=0.582  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++++......++++|++.++++..++.....  .+.+..+..++.+++.|+.|+|..   +++|+|+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  126 (256)
T cd05113          57 SHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDL  126 (256)
T ss_pred             CCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence            589999999999988889999999999999998865332  278888999999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.58  E-value=5.1e-14  Score=73.37  Aligned_cols=69  Identities=29%  Similarity=0.360  Sum_probs=61.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++||++++++..++.....   ++......++.+++.++.|+|+ .   +++|+|+
T Consensus        57 ~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl  126 (308)
T cd06615          57 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPENILGKISIAVLRGLTYLREKH---KIMHRDV  126 (308)
T ss_pred             CCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhhC---CEEECCC
Confidence            589999999999999999999999999999999876433   7888888999999999999997 5   7999986

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.58  E-value=3.1e-14  Score=72.14  Aligned_cols=70  Identities=26%  Similarity=0.517  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+......++++||+.++++..++.....  .+.+.....++.+++.++.|+|+.   +++|+|+
T Consensus        51 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl  120 (252)
T cd05084          51 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGP--RLKVKELIQMVENAAAGMEYLESK---HCIHRDL  120 (252)
T ss_pred             CCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---Ccccccc
Confidence            589999999999999999999999999999998865332  277888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.58  E-value=6.3e-14  Score=71.55  Aligned_cols=69  Identities=26%  Similarity=0.434  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++||++++++...+...+.   ++......++.+++.++.|+|..   +++|+|+
T Consensus        64 ~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  132 (267)
T cd06645          64 KHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGP---LSESQIAYVSRETLQGLYYLHSK---GKMHRDI  132 (267)
T ss_pred             CCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            589999999999999999999999999999998865443   78889999999999999999999   9999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.58  E-value=2.7e-14  Score=72.48  Aligned_cols=69  Identities=29%  Similarity=0.594  Sum_probs=60.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.. ...++++||+++|++..++.....  .++...+..++.+++.|+.|+|+.   +++|||+
T Consensus        59 ~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl  127 (259)
T cd05037          59 SHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNV  127 (259)
T ss_pred             CCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccC
Confidence            58999999999887 778999999999999999876432  278888889999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.58  E-value=6.9e-15  Score=82.40  Aligned_cols=69  Identities=26%  Similarity=0.461  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||++++|.|.. ..+|++||.++.|.+..+++.....  ++......++.|++.++.||++.   +++|||+
T Consensus       449 dHphIikLIGv~~e-~P~WivmEL~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLeSk---rfVHRDI  517 (974)
T KOG4257|consen  449 DHPHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLESK---RFVHRDI  517 (974)
T ss_pred             CCcchhheeeeeec-cceeEEEecccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHhh---chhhhhh
Confidence            59999999999984 6799999999999999999864432  78888888999999999999999   9999996

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.58  E-value=5e-14  Score=74.09  Aligned_cols=70  Identities=24%  Similarity=0.307  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++||++++++..++.....   ++...+..++.+++.|+.|+|+..  +++|||+
T Consensus        61 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dl  130 (331)
T cd06649          61 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLAYLREKH--QIMHRDV  130 (331)
T ss_pred             CCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCC
Confidence            589999999999999999999999999999999876433   788888899999999999999751  5999996

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=1.6e-14  Score=76.12  Aligned_cols=69  Identities=25%  Similarity=0.312  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+.+++..++++||++++++...+.....   ++...+..++.|++.|+.|+|..   +++||||
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dl  127 (350)
T cd05573          59 DSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDV---FPEETARFYIAELVLALDSVHKL---GFIHRDI  127 (350)
T ss_pred             CCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            489999999999999999999999999999999876432   88888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.57  E-value=4.8e-14  Score=73.27  Aligned_cols=72  Identities=25%  Similarity=0.508  Sum_probs=60.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC----------------cccCCHHhHHHHHHHHHHHhhHhhh
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE----------------ALELNWTNNVNIAKCVAHALSYLHH   64 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~l~~   64 (75)
                      +|+||+++++.+...+..++++||+.++++..++.....                ...+.+.....++.+++.|+.|+|+
T Consensus        77 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~  156 (304)
T cd05096          77 KDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS  156 (304)
T ss_pred             CCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            489999999999998999999999999999988754210                0124566778899999999999999


Q ss_pred             CCCCCeEeccC
Q 039179           65 HCTPSIIYRDI   75 (75)
Q Consensus        65 ~~~~~i~hrdl   75 (75)
                      .   +++|||+
T Consensus       157 ~---~ivH~dl  164 (304)
T cd05096         157 L---NFVHRDL  164 (304)
T ss_pred             C---CccccCc
Confidence            9   9999996

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.57  E-value=6.6e-14  Score=73.43  Aligned_cols=68  Identities=22%  Similarity=0.366  Sum_probs=59.9

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |++++++.+++...+..++++||+++|++...+.....   +.+.....++.|++.|+.|+|..   +++||||
T Consensus        60 ~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~---~~~~~~~~~~~qi~~al~~lH~~---~ivH~dl  127 (324)
T cd05587          60 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGK---FKEPHAVFYAAEIAIGLFFLHSK---GIIYRDL  127 (324)
T ss_pred             CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEecCC
Confidence            45688899999988999999999999999988865433   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.57  E-value=4.7e-14  Score=74.22  Aligned_cols=72  Identities=25%  Similarity=0.422  Sum_probs=58.3

Q ss_pred             CCCceeeEeeEEeeCC-eEEEEEecCCCCCHHHHhhccCC----------------------------------------
Q 039179            1 QHQNIVKLYGFCLHKK-CMFAIYKYMERGSLCCVLHKENE----------------------------------------   39 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~~~~~~----------------------------------------   39 (75)
                      +||||+++++.+...+ ..++++||+++|++..++.....                                        
T Consensus        69 ~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (338)
T cd05102          69 NHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSR  148 (338)
T ss_pred             cCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccc
Confidence            4899999999887644 58899999999999988864211                                        


Q ss_pred             -------------------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           40 -------------------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        40 -------------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                                         ...+.......++.|++.|+.|+|+.   +++||||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDi  200 (338)
T cd05102         149 FQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDL  200 (338)
T ss_pred             cccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCC
Confidence                               01255667778899999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.57  E-value=1.2e-14  Score=78.97  Aligned_cols=68  Identities=26%  Similarity=0.373  Sum_probs=57.3

Q ss_pred             CCCceeeEeeEEeeCC--eEEEEEecCCCCCHHHHhhccCCccc-CCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK--CMFAIYKYMERGSLCCVLHKENEALE-LNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~--~~~~~~e~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|+++++.+.-++.  .+|+++|||..|.+.-.-    ..+. +...++..++.++..|+.|||.+   +|+||||
T Consensus       166 ~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDI  236 (576)
T KOG0585|consen  166 HHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDI  236 (576)
T ss_pred             CCcCeeEEEEeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence            5999999999987754  799999999998874332    1122 78889999999999999999999   9999997

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.57  E-value=4.8e-14  Score=71.65  Aligned_cols=70  Identities=29%  Similarity=0.581  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++++..+...++++||+++|++...+.....  .+++.....++.+++.++.|+|..   +++|||+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  126 (256)
T cd05114          57 SHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDL  126 (256)
T ss_pred             CCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---Ccccccc
Confidence            589999999999999999999999999999998865322  277888889999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=3e-14  Score=77.66  Aligned_cols=69  Identities=25%  Similarity=0.434  Sum_probs=58.1

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++.+...+.  ..+|+++|||+. +|.-++...+-  .+...++..+..|++.|+.|+|.+   +++||||
T Consensus       174 ~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~v--kft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDI  244 (560)
T KOG0600|consen  174 DHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGV--KFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDI  244 (560)
T ss_pred             CCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCc--ccChHHHHHHHHHHHHHHHHHhhc---Ceeeccc
Confidence            599999999988876  689999999975 55555543221  288999999999999999999999   9999997

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.57  E-value=6.7e-14  Score=73.72  Aligned_cols=70  Identities=26%  Similarity=0.319  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++||+++++|..++.....   ++......++.+++.++.|+|+..  +++||||
T Consensus        61 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dl  130 (333)
T cd06650          61 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKH--KIMHRDV  130 (333)
T ss_pred             CCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhcC--CEEecCC
Confidence            589999999999999999999999999999999875433   778888889999999999999741  6999986

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.57  E-value=7.1e-14  Score=71.34  Aligned_cols=69  Identities=28%  Similarity=0.432  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|+++++++...+.....   ++......++.|++.++.|+|+.   +++|||+
T Consensus        64 ~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  132 (267)
T cd06646          64 KHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLAYLHSK---GKMHRDI  132 (267)
T ss_pred             CCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            589999999999999999999999999999988865332   78888889999999999999999   9999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.57  E-value=6.1e-14  Score=71.70  Aligned_cols=70  Identities=24%  Similarity=0.467  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++.+.+..+...++++|++.++++..++.....  .++......++.+++.++.|+|+.   +++|+|+
T Consensus        63 ~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl  132 (269)
T cd05065          63 DHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDL  132 (269)
T ss_pred             CCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccc
Confidence            489999999999998999999999999999998865332  278888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.57  E-value=6.7e-14  Score=72.10  Aligned_cols=69  Identities=19%  Similarity=0.183  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++.+.+..++..++++||++++++..++.....   +++..+..++.|++.|+.|+|+.   +++|||+
T Consensus        55 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH~~---~ivH~di  123 (279)
T cd05633          55 DCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGV---FSEKEMRFYATEIILGLEHMHNR---FVVYRDL  123 (279)
T ss_pred             CCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcCCCCC
Confidence            378999999999988899999999999999988865443   88889999999999999999999   9999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.57  E-value=3.9e-14  Score=72.52  Aligned_cols=72  Identities=24%  Similarity=0.368  Sum_probs=60.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++.+......++++||+++|++..++..... ........+..++.+++.|+.|+|+.   +++|||+
T Consensus        53 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~di  125 (268)
T cd05086          53 QHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDL  125 (268)
T ss_pred             CCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            589999999999998899999999999999998875321 11245566778899999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.56  E-value=5.5e-14  Score=73.14  Aligned_cols=71  Identities=28%  Similarity=0.434  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+...+..++++||+++|++..++..... ..++......++.+++.|+.|+|+.   +++|+|+
T Consensus        97 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dl  167 (302)
T cd05055          97 NHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDL  167 (302)
T ss_pred             CCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---Ceehhhh
Confidence            489999999999999999999999999999999865332 2278888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.56  E-value=3.2e-14  Score=71.83  Aligned_cols=68  Identities=24%  Similarity=0.276  Sum_probs=61.7

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |||++++++.+......++++|++.+|++...+.+...   +++.....++.+++.|+.|+|+.   +++|||+
T Consensus        44 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl  111 (237)
T cd05576          44 VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLN---IPEECVKRWAAEMVVALDALHRE---GIVCRDL  111 (237)
T ss_pred             CCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhC---CeeccCC
Confidence            78999999999998999999999999999998865433   78888999999999999999999   9999996

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=8.2e-14  Score=71.56  Aligned_cols=70  Identities=24%  Similarity=0.457  Sum_probs=62.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++|+++++++..++.....  .++...+..++.+++.++.|+|+.   +++|+|+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl  129 (280)
T cd06611          60 KHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDL  129 (280)
T ss_pred             CCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            489999999999999999999999999999998875432  278889999999999999999999   9999986

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.56  E-value=5e-14  Score=72.14  Aligned_cols=72  Identities=24%  Similarity=0.441  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCc------ccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEA------LELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++++.+......++++|+++++++..++......      ..++......++.+++.++.|||+.   +++|||
T Consensus        66 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~d  142 (275)
T cd05046          66 SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRD  142 (275)
T ss_pred             CCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCc
Confidence            4899999999998888899999999999999998754311      1378888999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       143 l  143 (275)
T cd05046         143 L  143 (275)
T ss_pred             C
Confidence            6

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.56  E-value=8.6e-14  Score=71.92  Aligned_cols=69  Identities=30%  Similarity=0.479  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|+++++++...+.....   ++......++.+++.++.++|..   +++|+|+
T Consensus        59 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl  127 (290)
T cd05580          59 RHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGR---FPEPVARFYAAQVVLALEYLHSL---DIVYRDL  127 (290)
T ss_pred             CCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEecCCC
Confidence            489999999999999999999999999999999876433   78888889999999999999999   9999986

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.56  E-value=3.7e-14  Score=75.74  Aligned_cols=72  Identities=29%  Similarity=0.440  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-----------------------------------------
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-----------------------------------------   39 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-----------------------------------------   39 (75)
                      +||||+++++.+..++..++++||+++|++..++.....                                         
T Consensus        97 ~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  176 (375)
T cd05104          97 NHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVS  176 (375)
T ss_pred             CCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcc
Confidence            499999999999999999999999999999988864210                                         


Q ss_pred             -------------------------------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           40 -------------------------------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        40 -------------------------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                                                     ...+++..+..++.+++.|+.|+|+.   +++|||+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl  240 (375)
T cd05104         177 YVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDL  240 (375)
T ss_pred             cccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence                                           01245667778899999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.56  E-value=3.5e-15  Score=80.76  Aligned_cols=68  Identities=22%  Similarity=0.417  Sum_probs=61.8

Q ss_pred             CCceeeEeeEEeeCC-eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKK-CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ||||+++.+++.+.. .+++++|||. .+|++.++...  ..+++..+..+..|+++|+.|+|.+   ++.|||+
T Consensus        68 hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~--r~fse~~irnim~QilqGL~hiHk~---GfFHRDl  136 (538)
T KOG0661|consen   68 HPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRN--RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDL  136 (538)
T ss_pred             CCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcC--CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccC
Confidence            999999999999887 8999999995 58999998753  3499999999999999999999999   9999996

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.56  E-value=4.5e-14  Score=75.43  Aligned_cols=72  Identities=32%  Similarity=0.514  Sum_probs=60.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-----------------------------------------
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-----------------------------------------   39 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-----------------------------------------   39 (75)
                      +|+||+++++.+..+...++++||+++|++..++.....                                         
T Consensus       100 ~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (374)
T cd05106         100 QHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSD  179 (374)
T ss_pred             cCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccc
Confidence            489999999999999999999999999999988754210                                         


Q ss_pred             --------------------------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           40 --------------------------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        40 --------------------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                                                ...+....+..++.+++.|+.|+|+.   +++||||
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDL  238 (374)
T cd05106         180 TYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDV  238 (374)
T ss_pred             cccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccC
Confidence                                      01255667788999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=1e-13  Score=70.54  Aligned_cols=69  Identities=29%  Similarity=0.428  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|+++++++.+.+.....   ++......++.+++.|+.++|+.   +++|+|+
T Consensus        62 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl  130 (263)
T cd06625          62 QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGA---LTETVTRKYTRQILEGVEYLHSN---MIVHRDI  130 (263)
T ss_pred             CCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            489999999999999999999999999999988875433   77888888999999999999999   9999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.55  E-value=9.9e-14  Score=78.62  Aligned_cols=69  Identities=30%  Similarity=0.409  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+......++++||+.+++|..++.....   +....+..++.+++.|+.|||..   +|+||||
T Consensus        62 ~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~---l~~~~~~~i~~qil~aL~yLH~~---gIiHrDL  130 (669)
T cd05610          62 KSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGY---FDEEMAVKYISEVALALDYLHRH---GIIHRDL  130 (669)
T ss_pred             CCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CEEeCCc
Confidence            489999999999999999999999999999998865433   77888899999999999999999   9999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.55  E-value=3.6e-14  Score=73.91  Aligned_cols=71  Identities=25%  Similarity=0.260  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++|+++++++..++..... ..++......++.+++.|+.|||+.   +++|||+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dl  127 (314)
T cd08216          57 QHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSV  127 (314)
T ss_pred             CCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            589999999999999999999999999999998875322 2277888888999999999999999   9999996

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.55  E-value=1e-13  Score=70.75  Aligned_cols=69  Identities=32%  Similarity=0.496  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+......++++|+++++++..++.....   ++...+..++.+++.++.++|..   +++|+|+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di  132 (267)
T cd06628          64 QHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGA---FEETLVRNFVRQILKGLNYLHNR---GIIHRDI  132 (267)
T ss_pred             CCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccC---ccHHHHHHHHHHHHHHHHHHHhc---CcccccC
Confidence            489999999999999999999999999999999876433   77888889999999999999999   9999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.55  E-value=1e-13  Score=70.82  Aligned_cols=70  Identities=27%  Similarity=0.478  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...+..++++|+++++++..++.....  .++......++.+++.|+.|+|+.   +++|+|+
T Consensus        63 ~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di  132 (266)
T cd05033          63 DHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDL  132 (266)
T ss_pred             CCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            589999999999998999999999999999999865332  278888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.55  E-value=1.2e-13  Score=71.83  Aligned_cols=69  Identities=22%  Similarity=0.313  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|++.++++..++.....   +++.....++.+++.|+.|+|..   +++|||+
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  127 (305)
T cd05609          59 ENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGA---LPVDMARMYFAETVLALEYLHNY---GIVHRDL  127 (305)
T ss_pred             CCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            589999999999998999999999999999999866433   78888888899999999999999   9999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.55  E-value=5.4e-14  Score=71.70  Aligned_cols=69  Identities=26%  Similarity=0.433  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|++.++++...+.....   +++.....++.+++.|+.++|+.   +++|+|+
T Consensus        61 ~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i  129 (268)
T cd06630          61 NHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGA---FKEAVIINYTEQLLRGLSYLHEN---QIIHRDV  129 (268)
T ss_pred             CCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            589999999999999999999999999999998875433   77888899999999999999999   9999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.55  E-value=4.3e-15  Score=82.20  Aligned_cols=69  Identities=30%  Similarity=0.580  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|.||+-+.|+|..++. .+++.||.+.+|+.++.....  .+.......++.|+++||.|||.+   +||||||
T Consensus       446 RH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLHAK---~IIHrDL  514 (678)
T KOG0193|consen  446 RHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDL  514 (678)
T ss_pred             chhhheeeehhhcCCce-eeeehhccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhc
Confidence            58999999999998777 899999999999999976433  288889999999999999999999   9999997

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.54  E-value=1.6e-13  Score=70.67  Aligned_cols=69  Identities=19%  Similarity=0.173  Sum_probs=61.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .|++++++.+.+..+...++++||+.++++...+.....   +++..+..++.+++.++.|+|+.   +++|||+
T Consensus        55 ~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~---l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di  123 (278)
T cd05606          55 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEAEMRFYAAEIILGLEHMHNR---FVVYRDL  123 (278)
T ss_pred             CCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEEcCCC
Confidence            479999999999999999999999999999888865432   88899999999999999999999   9999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.54  E-value=1.3e-13  Score=70.14  Aligned_cols=70  Identities=30%  Similarity=0.579  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+...+..++++|+++++++.+++.....  .+++.....++.+++.++.|+|+.   +++|||+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl  126 (256)
T cd05059          57 SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDL  126 (256)
T ss_pred             CCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---Ccccccc
Confidence            489999999999988899999999999999998865332  278888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.54  E-value=1.3e-13  Score=71.33  Aligned_cols=69  Identities=25%  Similarity=0.420  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+.++...++++|++.+ ++...+.....  .++...+..++.|++.|+.|+|+.   +++|||+
T Consensus        61 ~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dl  129 (288)
T cd07871          61 KHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGN--LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDL  129 (288)
T ss_pred             CCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            589999999999988899999999974 88887765332  267788888999999999999999   9999996

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.54  E-value=1.5e-13  Score=70.35  Aligned_cols=72  Identities=31%  Similarity=0.514  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|||++++++.+...+..++++|++++|++..++.....             ...++......++.+++.++.|+|+.  
T Consensus        54 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~--  131 (270)
T cd05047          54 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--  131 (270)
T ss_pred             cCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            489999999999998899999999999999999865321             11267778889999999999999998  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       132 -~i~H~di  138 (270)
T cd05047         132 -QFIHRDL  138 (270)
T ss_pred             -CEeeccc
Confidence             9999996

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.54  E-value=1e-13  Score=70.74  Aligned_cols=71  Identities=30%  Similarity=0.506  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|+++++++..++..... ..+++.....++.|++.++.++|..   +++|||+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl  130 (263)
T cd05052          60 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDL  130 (263)
T ss_pred             CCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccc
Confidence            489999999999988999999999999999998865332 2277888888999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.54  E-value=1.2e-13  Score=71.30  Aligned_cols=72  Identities=26%  Similarity=0.474  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-------------CcccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-------------EALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|+|++++++.+..++..++++||+++|++..++....             ....+.+..+..++.|++.|+.|+|..  
T Consensus        74 ~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~--  151 (293)
T cd05053          74 KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK--  151 (293)
T ss_pred             CCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC--
Confidence            48999999999999999999999999999999986421             112367778889999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       152 -~ivH~dl  158 (293)
T cd05053         152 -KCIHRDL  158 (293)
T ss_pred             -Ccccccc
Confidence             9999986

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.54  E-value=1.4e-13  Score=70.37  Aligned_cols=69  Identities=26%  Similarity=0.402  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|+++++++...+.....   ++...+..++.+++.++.++|+.   +++|+|+
T Consensus        66 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  134 (272)
T cd06629          66 DHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGR---FEEQLVRFFTEQVLEGLAYLHSK---GILHRDL  134 (272)
T ss_pred             CCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHhhC---CeeecCC
Confidence            489999999999999999999999999999999876432   78888888999999999999999   9999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.54  E-value=1.2e-13  Score=74.52  Aligned_cols=36  Identities=39%  Similarity=0.592  Sum_probs=32.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhc
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK   36 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~   36 (75)
                      .||||+++++++...+..++++||+++|++..++..
T Consensus        99 ~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105          99 PHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             CCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHH
Confidence            399999999999999999999999999999887753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.54  E-value=8.5e-14  Score=72.42  Aligned_cols=72  Identities=31%  Similarity=0.514  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|+|++++++.+..++..++++||++++++..++.....             ...++...+..++.+++.|+.|+|+.  
T Consensus        66 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~--  143 (303)
T cd05088          66 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--  143 (303)
T ss_pred             CCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            489999999999999999999999999999999865321             11367788899999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       144 -gi~H~dl  150 (303)
T cd05088         144 -QFIHRDL  150 (303)
T ss_pred             -Ccccccc
Confidence             9999996

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.53  E-value=1.6e-13  Score=73.64  Aligned_cols=67  Identities=24%  Similarity=0.389  Sum_probs=63.2

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |||++++.+.+.+....++++|++.+|.+.+.+... .   +.+.....+..+++.++.|+|..   +++|||+
T Consensus        95 hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~---~sE~da~~~~~~il~av~~lH~~---gvvHrDl  161 (382)
T KOG0032|consen   95 HPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-H---YSERDAAGIIRQILEAVKYLHSL---GVVHRDL  161 (382)
T ss_pred             CCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-c---CCHHHHHHHHHHHHHHHHHHHhC---CceeccC
Confidence            999999999999999999999999999999999875 2   88999999999999999999999   9999996

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.53  E-value=2.3e-13  Score=69.11  Aligned_cols=71  Identities=23%  Similarity=0.358  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+......++++|+++++++...+..... ..++......++.+++.++.++|+.   +++|+|+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl  127 (256)
T cd08221          57 QHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKG-QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDI  127 (256)
T ss_pred             CCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCC
Confidence            489999999999999999999999999999999876422 2378888889999999999999999   9999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.53  E-value=1.4e-13  Score=70.40  Aligned_cols=72  Identities=22%  Similarity=0.292  Sum_probs=60.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC--cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE--ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+......++++||+++|++..++.....  ...........++.+++.++.|+|+.   +++|||+
T Consensus        53 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl  126 (269)
T cd05087          53 QHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDL  126 (269)
T ss_pred             CCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEecccc
Confidence            589999999999988889999999999999998865321  11245556678889999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PHA02988 hypothetical protein; Provisional

Probab=99.53  E-value=1.6e-13  Score=70.96  Aligned_cols=70  Identities=29%  Similarity=0.477  Sum_probs=58.9

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+    ....++++||+++|+|...+.....   +.+.....++.+++.|+.++|...  +++|||+
T Consensus        76 ~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~---~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdl  149 (283)
T PHA02988         76 DSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKD---LSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNL  149 (283)
T ss_pred             CCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCC---CChhHHHHHHHHHHHHHHHHHhcC--CCCCCcC
Confidence            58999999999876    3468899999999999999876433   778888899999999999999731  6779986

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.53  E-value=1.4e-13  Score=69.98  Aligned_cols=71  Identities=27%  Similarity=0.490  Sum_probs=62.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+......++++|+++++++..++..... ..+.......++.+++.++.|+|+.   +++|+|+
T Consensus        60 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl  130 (261)
T cd05148          60 RHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDL  130 (261)
T ss_pred             CCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---Ceecccc
Confidence            489999999999999999999999999999999976332 2378888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.53  E-value=2e-13  Score=69.63  Aligned_cols=69  Identities=26%  Similarity=0.499  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+......++++|+++++++..++.....   ++...+..++.+++.++.++|+.   +++|+|+
T Consensus        60 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  128 (265)
T cd06631          60 KHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGP---LPEPVFCKYTKQILDGVAYLHNN---CVVHRDI  128 (265)
T ss_pred             CCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence            489999999999999999999999999999999876433   77888888999999999999999   9999986

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.53  E-value=3.2e-13  Score=69.49  Aligned_cols=70  Identities=27%  Similarity=0.405  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..++..++++||++++++...+.....  .+++.....++.+++.++.|+|+.   +++|+|+
T Consensus        60 ~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl  129 (282)
T cd06643          60 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLHEN---KIIHRDL  129 (282)
T ss_pred             CCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCC
Confidence            589999999999999999999999999999887754222  278888899999999999999999   9999986

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.53  E-value=1.9e-13  Score=69.57  Aligned_cols=71  Identities=24%  Similarity=0.494  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|+++++++.+.+..... ..+.......++.+++.++.|+|..   +++|||+
T Consensus        59 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl  129 (261)
T cd05072          59 QHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEG-GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDL  129 (261)
T ss_pred             CCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---Ceecccc
Confidence            589999999999988899999999999999998865322 2267778888999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.53  E-value=2.5e-13  Score=70.52  Aligned_cols=68  Identities=25%  Similarity=0.412  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++||++++++..++... .   +.......++.+++.++.|+|..   +++|+||
T Consensus        75 ~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~---~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dL  142 (296)
T cd06654          75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-C---MDEGQIAAVCRECLQALEFLHSN---QVIHRDI  142 (296)
T ss_pred             CCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc-C---CCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            4899999999999999999999999999999988542 2   67788889999999999999999   9999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.53  E-value=2e-13  Score=71.00  Aligned_cols=72  Identities=26%  Similarity=0.498  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|+|++++++.+......++++||+.+|++..++.....             ...++......++.|++.|+.|+|+.  
T Consensus        79 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~--  156 (304)
T cd05101          79 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ--  156 (304)
T ss_pred             cCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC--
Confidence            489999999999999999999999999999999865321             11256677788899999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       157 -givH~dl  163 (304)
T cd05101         157 -KCIHRDL  163 (304)
T ss_pred             -Ceeeccc
Confidence             9999996

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.53  E-value=3.2e-13  Score=68.89  Aligned_cols=69  Identities=22%  Similarity=0.455  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+. ....++++||++++++..++.....  .++...+..++.+++.++.|+|..   +++||||
T Consensus        53 ~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  121 (257)
T cd05115          53 DNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEGK---NFVHRDL  121 (257)
T ss_pred             CCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhc---Ceeeccc
Confidence            5899999999875 4567899999999999998864322  278889999999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.53  E-value=2.3e-13  Score=70.83  Aligned_cols=72  Identities=29%  Similarity=0.512  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|+|++++.+.+......++++|++++|++..++.....             ...++......++.+++.++.|+|+.  
T Consensus        82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~--  159 (307)
T cd05098          82 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK--  159 (307)
T ss_pred             CCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            489999999999999999999999999999999875321             11267778889999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       160 -gi~H~dl  166 (307)
T cd05098         160 -KCIHRDL  166 (307)
T ss_pred             -Ccccccc
Confidence             9999996

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.52  E-value=3.6e-13  Score=69.28  Aligned_cols=71  Identities=17%  Similarity=0.272  Sum_probs=60.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++||+. +++...+........++...+..++.|++.|+.|+|+.   +++|+|+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl  127 (285)
T cd07861          57 QHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDL  127 (285)
T ss_pred             CCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCC
Confidence            48999999999999999999999997 67877775433223378888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.52  E-value=2.8e-13  Score=70.79  Aligned_cols=72  Identities=29%  Similarity=0.535  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|+|++++++++..++..++++|++++|++..++.....             ...+.......++.+++.++.|+|+.  
T Consensus        76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~--  153 (314)
T cd05099          76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR--  153 (314)
T ss_pred             CCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC--
Confidence            499999999999988899999999999999999865321             12267777888999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       154 -gi~H~dl  160 (314)
T cd05099         154 -RCIHRDL  160 (314)
T ss_pred             -Ceeeccc
Confidence             9999996

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.52  E-value=2.5e-13  Score=69.41  Aligned_cols=70  Identities=29%  Similarity=0.443  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...+..++++|++.++++..++.....  .++......++.+++.++.|+|+.   +++|+|+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl  133 (268)
T cd05063          64 SHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDL  133 (268)
T ss_pred             CCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---Ceecccc
Confidence            489999999999999999999999999999999865332  277888889999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.52  E-value=3e-13  Score=68.68  Aligned_cols=71  Identities=15%  Similarity=0.225  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.++...++++|+++++++...+..... ..++......++.+++.++.++|+.   +++|+|+
T Consensus        56 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl  126 (255)
T cd08219          56 KHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRG-KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDI  126 (255)
T ss_pred             CCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCC
Confidence            489999999999999999999999999999888764322 2277888889999999999999999   9999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.52  E-value=2.7e-13  Score=68.62  Aligned_cols=70  Identities=30%  Similarity=0.536  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+......++++|+++++++...+.....  .+.+.....+..+++.++.++|..   +++|+|+
T Consensus        50 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl  119 (250)
T cd05085          50 DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKD--ELKTKQLVKFALDAAAGMAYLESK---NCIHRDL  119 (250)
T ss_pred             CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---Ceeeccc
Confidence            589999999999998899999999999999998865332  267888889999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.52  E-value=3.2e-13  Score=69.05  Aligned_cols=72  Identities=28%  Similarity=0.364  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..++..++++|+++++++...+.............+..++.+++.++.|+|..   +++|||+
T Consensus        63 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl  134 (268)
T cd06624          63 KHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDI  134 (268)
T ss_pred             CCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCC
Confidence            58999999999999999999999999999999987532221126777788899999999999999   9999986

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.52  E-value=1.6e-13  Score=69.55  Aligned_cols=71  Identities=24%  Similarity=0.293  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++||++++++..++..... ..++......++.+++.++.|+|+.   +++|+|+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl  127 (256)
T cd08529          57 DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRG-RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDI  127 (256)
T ss_pred             CCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            589999999999999999999999999999998876321 2377888888999999999999999   9999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.52  E-value=3.1e-13  Score=69.46  Aligned_cols=69  Identities=25%  Similarity=0.454  Sum_probs=60.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+.. ...++++|++++|++.+.+.....  .+++.....++.+++.|+.|+|+.   +++|+|+
T Consensus        67 ~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di  135 (279)
T cd05057          67 DHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDL  135 (279)
T ss_pred             CCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeccc
Confidence            48999999999887 788899999999999999876432  278888999999999999999998   9999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.52  E-value=3.2e-13  Score=69.83  Aligned_cols=72  Identities=31%  Similarity=0.570  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|+|++++.+.+..+...++++||++++++.+++.....             ...+++.....++.+++.++.|+|+.  
T Consensus        65 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~--  142 (291)
T cd05094          65 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ--  142 (291)
T ss_pred             CCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            589999999999998999999999999999999865321             12267778889999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       143 -~i~H~dl  149 (291)
T cd05094         143 -HFVHRDL  149 (291)
T ss_pred             -Ceeeccc
Confidence             9999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.52  E-value=1e-13  Score=71.38  Aligned_cols=69  Identities=20%  Similarity=0.320  Sum_probs=59.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++.+.+..++..++++||+.++.+........   .++...+..++.|++.|+.|+|..   +++||||
T Consensus        58 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl  126 (287)
T cd07848          58 KQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPN---GVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDI  126 (287)
T ss_pred             CCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            58999999999999999999999999887765543222   278888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.52  E-value=3.9e-13  Score=69.51  Aligned_cols=70  Identities=26%  Similarity=0.394  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..++..++++||++++++...+.....  .+....+..++.|++.++.++|+.   +++|||+
T Consensus        67 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl  136 (292)
T cd06644          67 NHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHSM---KIIHRDL  136 (292)
T ss_pred             CCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCC
Confidence            589999999999999999999999999999887754322  278888999999999999999999   9999996

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.52  E-value=3.5e-14  Score=73.87  Aligned_cols=71  Identities=25%  Similarity=0.465  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .|+||+++++++.+    ...+.++||.+.+|.|.+.+...+. ..+++.++..+..+|..++.|||+.   .|.|||+
T Consensus       113 ~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDl  187 (400)
T KOG0604|consen  113 GHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDL  187 (400)
T ss_pred             CCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccC
Confidence            48999999998865    3467899999999999999987543 3489999999999999999999999   9999996

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.51  E-value=4.2e-13  Score=69.33  Aligned_cols=71  Identities=20%  Similarity=0.220  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++.+.+..++..++++|++.++++...+..... ..++...+..++.|++.++.|+|..   +++|||+
T Consensus        58 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~di  128 (285)
T cd05632          58 NSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE---NTVYRDL  128 (285)
T ss_pred             CCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCC
Confidence            488999999999999999999999999999887764332 2288889999999999999999999   9999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=3.5e-13  Score=68.53  Aligned_cols=70  Identities=27%  Similarity=0.432  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|++.++++..++.....  .++...+..++.+++.++.|+|..   +++|+|+
T Consensus        58 ~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl  127 (262)
T cd06613          58 RHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLHET---GKIHRDI  127 (262)
T ss_pred             CCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CceecCC
Confidence            589999999999999999999999999999998866422  278888899999999999999999   9999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.51  E-value=3.6e-13  Score=69.24  Aligned_cols=69  Identities=20%  Similarity=0.298  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++||++++.+.........   +++..+..++.+++.++.|+|..   +++|+|+
T Consensus        58 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl  126 (286)
T cd07847          58 KHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRG---VPEHLIKKIIWQTLQAVNFCHKH---NCIHRDV  126 (286)
T ss_pred             CCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCC---CCHHHHHHHHHHHHHHHHHHHHC---CceecCC
Confidence            489999999999999999999999999888777654332   78888999999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.51  E-value=2.7e-13  Score=69.09  Aligned_cols=69  Identities=33%  Similarity=0.543  Sum_probs=61.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.++...++++|+++++++...+.+...   ++...+..++.+++.++.|+|+.   +++|+|+
T Consensus        51 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl  119 (262)
T cd05572          51 NHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGL---FDEYTARFYIACVVLAFEYLHNR---GIIYRDL  119 (262)
T ss_pred             CCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhhC---CcccCCC
Confidence            589999999999999999999999999999999876433   77888888999999999999998   9999986

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.51  E-value=2.1e-13  Score=71.31  Aligned_cols=69  Identities=20%  Similarity=0.414  Sum_probs=59.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+ ..++++|++++|++.+.+.....  .++......++.+++.|+.|||+.   +++||||
T Consensus        67 ~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dl  135 (316)
T cd05108          67 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDL  135 (316)
T ss_pred             CCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence            599999999998764 56789999999999999876432  277788889999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.51  E-value=2e-13  Score=70.85  Aligned_cols=72  Identities=29%  Similarity=0.471  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|||++++++.+...+..++++|+++++++..++.+...             ...++...+..++.+++.|+.++|+.  
T Consensus        61 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~--  138 (297)
T cd05089          61 HHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK--  138 (297)
T ss_pred             CCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            489999999999988899999999999999999865321             11367778889999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       139 -~ivH~dl  145 (297)
T cd05089         139 -QFIHRDL  145 (297)
T ss_pred             -CcccCcC
Confidence             9999996

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.51  E-value=5.2e-13  Score=69.02  Aligned_cols=71  Identities=23%  Similarity=0.261  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++.+.+..++..++++|+++++++...+..... ..++......++.|++.|+.|+|..   +++|||+
T Consensus        58 ~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~di  128 (285)
T cd05630          58 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDL  128 (285)
T ss_pred             CCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCC
Confidence            488999999999999999999999999999888754322 2278888889999999999999998   9999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.51  E-value=4.1e-13  Score=69.22  Aligned_cols=70  Identities=26%  Similarity=0.478  Sum_probs=60.3

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...  ...++++||++++++..++.....  .+++.....++.+++.++.|+|+.   +++|||+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dl  135 (284)
T cd05079          64 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGSR---QYVHRDL  135 (284)
T ss_pred             CCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---Ceeeccc
Confidence            489999999988775  568899999999999999865322  278888899999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.51  E-value=2.9e-13  Score=68.64  Aligned_cols=69  Identities=26%  Similarity=0.355  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++||++++++..++.....   ++......++.+++.++.++|..   +++|+|+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  128 (258)
T cd06632          60 QHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGS---FPEPVIRLYTRQILLGLEYLHDR---NTVHRDI  128 (258)
T ss_pred             CCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            489999999999988999999999999999999876432   77888888999999999999999   9999986

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.51  E-value=3.6e-13  Score=70.01  Aligned_cols=69  Identities=28%  Similarity=0.419  Sum_probs=58.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+++.++...++++||+. +++...+.....  .+....+..++.|++.|+.|+|+.   +++||||
T Consensus        61 ~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dl  129 (303)
T cd07869          61 KHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIHQR---YILHRDL  129 (303)
T ss_pred             CCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            58999999999999999999999996 566666654322  277888889999999999999999   9999996

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.50  E-value=3.6e-13  Score=69.35  Aligned_cols=69  Identities=23%  Similarity=0.404  Sum_probs=59.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++.. ...++++|++++|++.+++.....  .+++.....++.|++.|+.|+|+.   +++|||+
T Consensus        67 ~h~~iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dl  135 (279)
T cd05111          67 DHAYIVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNL  135 (279)
T ss_pred             CCCCcceEEEEECC-CccEEEEEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CEecccc
Confidence            48999999998754 557789999999999999875332  278888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.50  E-value=3.5e-14  Score=72.37  Aligned_cols=69  Identities=22%  Similarity=0.324  Sum_probs=60.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++.+.+...+..++++|++.++.+..-+...   ....+.....+..|++.++.|.|.+   +|+|||+
T Consensus        68 qHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDv  136 (355)
T KOG0033|consen   68 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDL  136 (355)
T ss_pred             CCCcEeehhhhhcccceeEEEEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccC
Confidence            5999999999999999999999999999887666443   2256677788999999999999999   9999996

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.50  E-value=3.2e-13  Score=72.63  Aligned_cols=68  Identities=29%  Similarity=0.463  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..+...++++|++. +++...+.....   ++...+..++.|++.|+.|+|..   +|+||||
T Consensus       141 ~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDi  208 (391)
T PHA03212        141 NHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKRN---IAICDILAIERSVLRAIQYLHEN---RIIHRDI  208 (391)
T ss_pred             CCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            59999999999999999999999985 677777755333   78888899999999999999999   9999996

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.50  E-value=4.4e-13  Score=68.85  Aligned_cols=72  Identities=21%  Similarity=0.371  Sum_probs=60.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCc-------ccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEec
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEA-------LELNWTNNVNIAKCVAHALSYLHHHCTPSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hr   73 (75)
                      +|+|++++++.+..+...++++|+++++++..++......       ..+.......++.+++.++.|+|..   +++|+
T Consensus        67 ~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~  143 (277)
T cd05062          67 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHR  143 (277)
T ss_pred             CCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccC
Confidence            4899999999999888999999999999999988653211       1245567788899999999999998   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      |+
T Consensus       144 dl  145 (277)
T cd05062         144 DL  145 (277)
T ss_pred             Cc
Confidence            96

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.50  E-value=5.4e-13  Score=68.68  Aligned_cols=70  Identities=30%  Similarity=0.489  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...  ...++++||++++++..++.....  .++......++.+++.|+.|+|..   +++|||+
T Consensus        63 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dl  134 (284)
T cd05081          63 QHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGSK---RYVHRDL  134 (284)
T ss_pred             CCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccC
Confidence            589999999987543  468899999999999999865332  277888889999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.50  E-value=3.9e-13  Score=68.30  Aligned_cols=71  Identities=25%  Similarity=0.507  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+.+....++++|+++++++..++..... ..+++.....++.+++.++.|+|..   +++|+|+
T Consensus        58 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di  128 (256)
T cd05039          58 RHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDL  128 (256)
T ss_pred             CCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---Cccchhc
Confidence            489999999999988899999999999999999876432 1278889999999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.50  E-value=5.1e-13  Score=68.65  Aligned_cols=72  Identities=31%  Similarity=0.446  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC----cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE----ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+......++++|++.++++..++.....    ...+.+..+..++.+++.++.|||..   +++|+|+
T Consensus        67 ~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dl  142 (277)
T cd05036          67 NHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDI  142 (277)
T ss_pred             CCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccc
Confidence            489999999999988889999999999999998865321    11367788889999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.50  E-value=3.1e-13  Score=77.43  Aligned_cols=71  Identities=21%  Similarity=0.386  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEee-----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH-----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++.+++.+..     ++++|++||||.+|++.++++... ...+.+..+..++..++.|+.+||.+   .++|||+
T Consensus        74 ~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDi  149 (953)
T KOG0587|consen   74 HHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDI  149 (953)
T ss_pred             CCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecc
Confidence            59999999999865     468999999999999999998855 33488889999999999999999999   9999996

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.50  E-value=5.3e-13  Score=68.11  Aligned_cols=72  Identities=14%  Similarity=0.206  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+...+..++++|+++++++..++.... ....++......++.+++.|+.|+|+.   +++|+|+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl  132 (267)
T cd08228          60 NHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDI  132 (267)
T ss_pred             CCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCC
Confidence            58999999999999999999999999999988875321 112267778889999999999999999   9999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.50  E-value=1.9e-13  Score=72.45  Aligned_cols=65  Identities=26%  Similarity=0.392  Sum_probs=55.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++||+.++++....    .   .....+..++.+++.|+.|||..   +++||||
T Consensus       130 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~----~---~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl  194 (353)
T PLN00034        130 NHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH----I---ADEQFLADVARQILSGIAYLHRR---HIVHRDI  194 (353)
T ss_pred             CCCCcceeeeEeccCCeEEEEEecCCCCcccccc----c---CCHHHHHHHHHHHHHHHHHHHHC---CEeecCC
Confidence            5899999999999999999999999999875321    1   45566778899999999999999   9999996

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.50  E-value=4.9e-13  Score=68.14  Aligned_cols=71  Identities=25%  Similarity=0.484  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+...+..++++|+++++++..++.... ...+.......++.+++.++.++|..   +++|+|+
T Consensus        59 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  129 (261)
T cd05068          59 RHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDL  129 (261)
T ss_pred             CCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccC
Confidence            48999999999999899999999999999999987533 12378888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.50  E-value=1.1e-13  Score=70.33  Aligned_cols=69  Identities=30%  Similarity=0.429  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++|++.++++...+.....   ++......++.|++.++.++|..   +++|+|+
T Consensus        51 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di  119 (265)
T cd05579          51 QSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGS---LDEDVARIYIAEIVLALEYLHSN---GIIHRDL  119 (265)
T ss_pred             CCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHc---CeecCCC
Confidence            489999999999988899999999999999998876442   78888999999999999999999   9999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.50  E-value=5.9e-13  Score=68.80  Aligned_cols=72  Identities=31%  Similarity=0.612  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC----------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCe
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE----------ALELNWTNNVNIAKCVAHALSYLHHHCTPSI   70 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i   70 (75)
                      +|+|++++.+.+...+..++++||++++++..++.....          ...+++.....++.+++.++.|+|..   ++
T Consensus        65 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i  141 (288)
T cd05093          65 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HF  141 (288)
T ss_pred             CCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            489999999999999999999999999999998864321          12378888899999999999999999   99


Q ss_pred             EeccC
Q 039179           71 IYRDI   75 (75)
Q Consensus        71 ~hrdl   75 (75)
                      +|||+
T Consensus       142 ~H~dl  146 (288)
T cd05093         142 VHRDL  146 (288)
T ss_pred             eeccc
Confidence            99996

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.49  E-value=3.2e-13  Score=68.41  Aligned_cols=72  Identities=28%  Similarity=0.533  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++++++..+...++++|+++++++..++.....      ...+++.....++.+++.++.++|+.   +++|+|
T Consensus        54 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~d  130 (262)
T cd00192          54 GHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRD  130 (262)
T ss_pred             CCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCc
Confidence            489999999999998999999999999999999876410      12378899999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       131 i  131 (262)
T cd00192         131 L  131 (262)
T ss_pred             c
Confidence            6

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.49  E-value=5.4e-13  Score=69.30  Aligned_cols=68  Identities=25%  Similarity=0.413  Sum_probs=61.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++||++++++..++.+. .   ++......++.+++.++.++|+.   +++||||
T Consensus        74 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~---~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL  141 (297)
T cd06656          74 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-C---MDEGQIAAVCRECLQALDFLHSN---QVIHRDI  141 (297)
T ss_pred             CCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC-C---CCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            5899999999999999999999999999999988642 2   67788889999999999999999   9999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.49  E-value=5.2e-13  Score=70.29  Aligned_cols=72  Identities=28%  Similarity=0.508  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|+||+++++.+..++..++++||+++|++..++.....             ...+.......++.|++.|+.|+|..  
T Consensus        76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~--  153 (334)
T cd05100          76 KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ--  153 (334)
T ss_pred             CCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            489999999999998899999999999999999865221             11256677788899999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       154 -givH~dl  160 (334)
T cd05100         154 -KCIHRDL  160 (334)
T ss_pred             -Ceecccc
Confidence             9999996

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.49  E-value=5.5e-13  Score=68.66  Aligned_cols=72  Identities=25%  Similarity=0.449  Sum_probs=60.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC--------------cccCCHHhHHHHHHHHHHHhhHhhhCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE--------------ALELNWTNNVNIAKCVAHALSYLHHHC   66 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~l~~~~   66 (75)
                      +|+|++++.+.+..+...++++||++++++..++.....              ...+++.....++.+++.++.|+|++ 
T Consensus        65 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-  143 (283)
T cd05090          65 HHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-  143 (283)
T ss_pred             CCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-
Confidence            589999999999998999999999999999988753210              11256777888999999999999999 


Q ss_pred             CCCeEeccC
Q 039179           67 TPSIIYRDI   75 (75)
Q Consensus        67 ~~~i~hrdl   75 (75)
                        +++|||+
T Consensus       144 --~i~H~dl  150 (283)
T cd05090         144 --FFVHKDL  150 (283)
T ss_pred             --Ceehhcc
Confidence              9999996

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.49  E-value=6.3e-13  Score=68.34  Aligned_cols=71  Identities=23%  Similarity=0.240  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...+..++++||++++++...+..... ..++......++.+++.++.|+|..   +++|+|+
T Consensus        51 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di  121 (277)
T cd05577          51 SSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDL  121 (277)
T ss_pred             CCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            489999999999998999999999999999988865432 2278888889999999999999999   9999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.49  E-value=5.6e-13  Score=68.54  Aligned_cols=72  Identities=29%  Similarity=0.540  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCc-------------ccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEA-------------LELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|+|++++++.+......++++|+++++++..++......             ..++......++.+++.++.|||..  
T Consensus        66 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~--  143 (283)
T cd05048          66 QHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH--  143 (283)
T ss_pred             CCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            4899999999999888999999999999999988653110             2267778889999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|+|+
T Consensus       144 -~i~H~dl  150 (283)
T cd05048         144 -HFVHRDL  150 (283)
T ss_pred             -Ceecccc
Confidence             9999996

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.49  E-value=4.7e-13  Score=69.20  Aligned_cols=72  Identities=28%  Similarity=0.491  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC--------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE--------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +|+|++++.+.+..+...++++|++.++++..++.....        ...++...+..++.+++.|+.|||+.   +++|
T Consensus        77 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H  153 (296)
T cd05051          77 SDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVH  153 (296)
T ss_pred             CCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccc
Confidence            489999999999998999999999999999998865331        11377888899999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      ||+
T Consensus       154 ~dl  156 (296)
T cd05051         154 RDL  156 (296)
T ss_pred             ccc
Confidence            996

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.49  E-value=8.6e-13  Score=67.01  Aligned_cols=71  Identities=21%  Similarity=0.296  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...+..++++|+++++++...+..... ..++......++.+++.++.++|+.   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l  127 (256)
T cd08218          57 KHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDI  127 (256)
T ss_pred             CCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence            489999999999999999999999999999988865322 1267888889999999999999999   9999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.49  E-value=9.1e-13  Score=67.74  Aligned_cols=68  Identities=26%  Similarity=0.403  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.++...++++|+++++++...+.. ..   ++......++.+++.++.++|..   +++|+|+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~---l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl  127 (277)
T cd06640          60 DSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GP---FDEFQIATMLKEILKGLDYLHSE---KKIHRDI  127 (277)
T ss_pred             CCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc-CC---CCHHHHHHHHHHHHHHHHHHHhC---CccCcCC
Confidence            489999999999999999999999999999988864 22   77788888999999999999999   9999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.48  E-value=6.6e-13  Score=67.31  Aligned_cols=70  Identities=27%  Similarity=0.408  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++|++.++++...+.....  .+++.....++.+++.++.|+|+.   +++|+|+
T Consensus        56 ~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl  125 (256)
T cd06612          56 DSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHSN---KKIHRDI  125 (256)
T ss_pred             CCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            589999999999999999999999999999998865332  278888899999999999999999   9999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.48  E-value=8.6e-13  Score=67.95  Aligned_cols=72  Identities=29%  Similarity=0.565  Sum_probs=61.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC------------cccCCHHhHHHHHHHHHHHhhHhhhCCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE------------ALELNWTNNVNIAKCVAHALSYLHHHCTP   68 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~   68 (75)
                      +|+|++++++.+......++++|+++++++..++.....            ...++...+..++.+++.++.|+|+.   
T Consensus        65 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---  141 (280)
T cd05092          65 QHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---  141 (280)
T ss_pred             CCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---
Confidence            589999999999988899999999999999998865321            01267788889999999999999999   


Q ss_pred             CeEeccC
Q 039179           69 SIIYRDI   75 (75)
Q Consensus        69 ~i~hrdl   75 (75)
                      +++|||+
T Consensus       142 ~i~H~dl  148 (280)
T cd05092         142 HFVHRDL  148 (280)
T ss_pred             Ceecccc
Confidence            9999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.48  E-value=6.3e-13  Score=68.66  Aligned_cols=69  Identities=26%  Similarity=0.291  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++|+++.+.+..+...++++|+++++++...+.....   ++...+..++.+++.++.++|..   +++|||+
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl  131 (290)
T cd05613          63 QSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRER---FKEQEVQIYSGEIVLALEHLHKL---GIIYRDI  131 (290)
T ss_pred             cCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeeccCC
Confidence            379999999999988899999999999999998875433   77888888888999999999999   9999986

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.48  E-value=5.3e-13  Score=68.18  Aligned_cols=72  Identities=33%  Similarity=0.482  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC----CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN----EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++.+.+......++++|+++++++..++....    ....+....+..++.+++.++.|+|..   +++|+|+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl  132 (269)
T cd05044          57 NHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDL  132 (269)
T ss_pred             CCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            58999999999998889999999999999999886521    112266778888999999999999998   9999986

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.48  E-value=5.6e-13  Score=68.32  Aligned_cols=72  Identities=18%  Similarity=0.331  Sum_probs=61.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEec
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hr   73 (75)
                      +|+|++++++.+..+...++++|+++++++..++.....       ...+.+..+..++.+++.|+.|+|..   +++||
T Consensus        67 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~  143 (277)
T cd05032          67 NCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHR  143 (277)
T ss_pred             CCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence            489999999999999999999999999999999865321       11256677888999999999999999   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      |+
T Consensus       144 di  145 (277)
T cd05032         144 DL  145 (277)
T ss_pred             cc
Confidence            86

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.48  E-value=9.6e-13  Score=68.61  Aligned_cols=69  Identities=20%  Similarity=0.377  Sum_probs=58.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++||+.+ ++...+.....  .+....+..++.+++.|+.|+|+.   +++|||+
T Consensus        62 ~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dl  130 (309)
T cd07872          62 KHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDL  130 (309)
T ss_pred             CCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            589999999999999999999999975 77777654332  267778888999999999999999   9999996

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.48  E-value=8.5e-13  Score=67.18  Aligned_cols=71  Identities=28%  Similarity=0.564  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|+++++++..++..... ..++...+..++.+++.++.|+|.+   +++|+|+
T Consensus        59 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di  129 (261)
T cd05034          59 RHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDL  129 (261)
T ss_pred             CCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence            489999999999888899999999999999999876332 2278888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=6.7e-13  Score=69.28  Aligned_cols=71  Identities=27%  Similarity=0.348  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|++.++++...+..... ..+++.....++.+++.++.|+|..   +++|+|+
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  129 (316)
T cd05574          59 DHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPG-KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDL  129 (316)
T ss_pred             CCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCC-CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            489999999999999999999999999999998865321 2378888888999999999999999   9999986

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.48  E-value=1e-12  Score=67.66  Aligned_cols=68  Identities=35%  Similarity=0.530  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...  ...++++|++.++++..++....    +++..+..++.+++.|+.|+|+.   +++|||+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dl  133 (283)
T cd05080          64 YHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK----LNLAQLLLFAQQICEGMAYLHSQ---HYIHRDL  133 (283)
T ss_pred             CCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHcC----CCHHHHHHHHHHHHHHHHHHHHC---Ceecccc
Confidence            589999999987653  35889999999999999886532    88889999999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.48  E-value=6.5e-13  Score=71.72  Aligned_cols=35  Identities=37%  Similarity=0.622  Sum_probs=32.7

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhc
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK   36 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~   36 (75)
                      |+||+++++.+..++..++++||+.+|+|.+++..
T Consensus       100 H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107         100 HLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             CCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHh
Confidence            99999999999998999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.48  E-value=9.9e-13  Score=67.80  Aligned_cols=69  Identities=30%  Similarity=0.438  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +|+|++++++.+......++++||++++++...+...+.   ++......++.+++.++.|+|. .   +++|+|+
T Consensus        61 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~---~i~H~dl  130 (284)
T cd06620          61 RSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGP---IPVEILGKIAVAVVEGLTYLYNVH---RIMHRDI  130 (284)
T ss_pred             CCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHhc---CeeccCC
Confidence            589999999999999999999999999999988865433   7888888999999999999996 4   7999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.47  E-value=1.2e-12  Score=67.00  Aligned_cols=71  Identities=27%  Similarity=0.442  Sum_probs=59.9

Q ss_pred             CCCceeeEeeEEeeC------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++.+.+...      ...++++|++.++++...+..... ..+.+..+..++.|++.++.|||+.   +++|+|
T Consensus        61 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~d  136 (272)
T cd06637          61 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQH---KVIHRD  136 (272)
T ss_pred             CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCC
Confidence            489999999998753      358899999999999998875332 2277888888999999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       137 l  137 (272)
T cd06637         137 I  137 (272)
T ss_pred             C
Confidence            6

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.47  E-value=7.6e-13  Score=69.51  Aligned_cols=68  Identities=22%  Similarity=0.422  Sum_probs=57.0

Q ss_pred             CCCceeeEeeEEeeCC-----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK-----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++.+.+....     ..++++|++. +++...+.....   +++.....++.|++.|+.|||+.   +++||||
T Consensus        57 ~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dl  129 (338)
T cd07859          57 RHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDD---LTPEHHQFFLYQLLRALKYIHTA---NVFHRDL  129 (338)
T ss_pred             CCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            5999999999876432     4799999995 678887765433   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.47  E-value=8.3e-13  Score=66.97  Aligned_cols=71  Identities=24%  Similarity=0.365  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|+++++++..++..... ..++...+..++.+++.++.++|++   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl  127 (256)
T cd08220          57 SHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCN-SLLDEDTILHFFVQILLALHHVHTK---LILHRDL  127 (256)
T ss_pred             CCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            489999999999888999999999999999999876332 2277888888999999999999999   9999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.47  E-value=5e-13  Score=71.02  Aligned_cols=69  Identities=22%  Similarity=0.339  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..+...++++|++. +++..++.....  .+++..+..++.|++.|+.|+|..   +++||||
T Consensus       115 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl  183 (357)
T PHA03209        115 NHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSR--PLPIDQALIIEKQILEGLRYLHAQ---RIIHRDV  183 (357)
T ss_pred             CCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            58999999999999999999999985 577777754322  278888999999999999999999   9999996

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.47  E-value=7.1e-13  Score=68.75  Aligned_cols=68  Identities=26%  Similarity=0.441  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++.+.+..++..++++||++++++..++....    ++...+..++.+++.++.++|+.   +++|+|+
T Consensus        74 ~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL  141 (293)
T cd06647          74 KHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN---QVIHRDI  141 (293)
T ss_pred             CCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhC---CEeeccC
Confidence            48999999999999999999999999999999886532    67778888999999999999999   9999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.47  E-value=5.5e-13  Score=69.04  Aligned_cols=69  Identities=25%  Similarity=0.386  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.+.+..++++|++ ++++...+....  ..+++..+..++.|++.++.|+|+.   +++|+|+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl  128 (298)
T cd07841          60 KHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDL  128 (298)
T ss_pred             CCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCC
Confidence            4899999999999988999999999 889999886543  1278888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.47  E-value=1.7e-12  Score=66.79  Aligned_cols=68  Identities=29%  Similarity=0.440  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++||+.++++...+...    .++...+..++.+++.++.++|..   +++|+|+
T Consensus        60 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl  127 (277)
T cd06641          60 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDI  127 (277)
T ss_pred             CCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCC
Confidence            4899999999999999999999999999999887542    278888899999999999999999   9999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.47  E-value=1.4e-12  Score=66.45  Aligned_cols=72  Identities=17%  Similarity=0.235  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++++.+..++..++++||++++++..++.... ....++...+..++.+++.++.++|+.   +++|+|+
T Consensus        60 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl  132 (267)
T cd08224          60 DHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDI  132 (267)
T ss_pred             CCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCc
Confidence            48999999999999999999999999999998886421 112367888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.47  E-value=8.8e-13  Score=68.15  Aligned_cols=72  Identities=18%  Similarity=0.333  Sum_probs=60.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEec
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hr   73 (75)
                      +|+|++++++.+..+...++++||+++|++..++.....       ........+..++.+++.|+.|+|..   +++||
T Consensus        67 ~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~  143 (288)
T cd05061          67 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHR  143 (288)
T ss_pred             CCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCC
Confidence            489999999999988899999999999999999975221       01134556778899999999999999   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      |+
T Consensus       144 di  145 (288)
T cd05061         144 DL  145 (288)
T ss_pred             CC
Confidence            86

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.47  E-value=1.1e-12  Score=66.64  Aligned_cols=69  Identities=32%  Similarity=0.465  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|+++++++...+.....   ++......++.+++.++.++|+ .   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l  126 (264)
T cd06623          57 ESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGK---IPEPVLAYIARQILKGLDYLHTKR---HIIHRDI  126 (264)
T ss_pred             CCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhccC---CCccCCC
Confidence            489999999999999999999999999999999875432   8888899999999999999999 8   9999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.47  E-value=9.3e-13  Score=68.07  Aligned_cols=72  Identities=25%  Similarity=0.500  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC---------------------cccCCHHhHHHHHHHHHHHh
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE---------------------ALELNWTNNVNIAKCVAHAL   59 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l   59 (75)
                      +||||+++++.+..++..++++||+.++++..++.....                     ...++...+..++.+++.++
T Consensus        61 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l  140 (290)
T cd05045          61 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGM  140 (290)
T ss_pred             CCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHH
Confidence            489999999999998999999999999999988764210                     11256777889999999999


Q ss_pred             hHhhhCCCCCeEeccC
Q 039179           60 SYLHHHCTPSIIYRDI   75 (75)
Q Consensus        60 ~~l~~~~~~~i~hrdl   75 (75)
                      .|+|+.   +++|||+
T Consensus       141 ~~LH~~---~ivH~di  153 (290)
T cd05045         141 QYLAEM---KLVHRDL  153 (290)
T ss_pred             HHHHHC---Ceehhhh
Confidence            999999   9999986

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.47  E-value=1.1e-12  Score=66.83  Aligned_cols=68  Identities=22%  Similarity=0.423  Sum_probs=58.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+. ....++++|+++++++..++.....   ++......++.|++.++.++|+.   +++|||+
T Consensus        54 ~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl  121 (257)
T cd05116          54 DNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNKH---VTEKNITELVHQVSMGMKYLEET---NFVHRDL  121 (257)
T ss_pred             CCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEeeccc
Confidence            4899999999875 4567899999999999998865433   78888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.47  E-value=1.9e-12  Score=65.93  Aligned_cols=72  Identities=28%  Similarity=0.387  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..++..++++|+++++++...+........+++.....++.+++.++.++|+.   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l  128 (267)
T cd06610          57 NHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDI  128 (267)
T ss_pred             CCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            48999999999999999999999999999999987633222378888889999999999999999   9999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.47  E-value=1.1e-12  Score=68.21  Aligned_cols=68  Identities=26%  Similarity=0.442  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++|++.++++...+... .   +++..+..++.+++.++.++|+.   +++|+|+
T Consensus        74 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~---l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL  141 (296)
T cd06655          74 KNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET-C---MDEAQIAAVCRECLQALEFLHAN---QVIHRDI  141 (296)
T ss_pred             CCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc-C---CCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            5899999999999999999999999999999887642 2   78888999999999999999999   9999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.46  E-value=1.3e-12  Score=67.93  Aligned_cols=69  Identities=23%  Similarity=0.377  Sum_probs=59.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++|++. +++...+.....  .++...+..++.+++.++.|+|+.   +++|+|+
T Consensus        62 ~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dl  130 (301)
T cd07873          62 KHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDL  130 (301)
T ss_pred             CCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence            58999999999999999999999997 578777765322  277888888999999999999999   9999996

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.46  E-value=2.6e-13  Score=70.34  Aligned_cols=68  Identities=29%  Similarity=0.555  Sum_probs=60.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|+++++++..++... .   +.......++.+++.|+.|+|+.   +++|||+
T Consensus        77 ~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~---l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dl  144 (292)
T cd06658          77 HHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT-R---MNEEQIATVCLSVLRALSYLHNQ---GVIHRDI  144 (292)
T ss_pred             CCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcC-C---CCHHHHHHHHHHHHHHHHHHHHC---CEeecCC
Confidence            4899999999999999999999999999998877532 2   77888899999999999999999   9999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.46  E-value=7.3e-13  Score=67.60  Aligned_cols=72  Identities=17%  Similarity=0.269  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|+++++++..++... .....+++.....++.+++.++.|+|+.   +++|+|+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl  132 (267)
T cd08229          60 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDI  132 (267)
T ss_pred             cCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            4899999999999999999999999999999887631 1122367888889999999999999999   9999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.46  E-value=6.9e-13  Score=67.32  Aligned_cols=69  Identities=32%  Similarity=0.503  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++.+.+......++++|++.++++..++.....   +....+..++.+++.++.+||..   +++|+||
T Consensus        56 ~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~di  124 (260)
T PF00069_consen   56 RHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKP---LSEEEILKIAYQILEALAYLHSK---GIVHRDI  124 (260)
T ss_dssp             TBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSS---BBHHHHHHHHHHHHHHHHHHHHT---TEEESSB
T ss_pred             ccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccc---ccccccc
Confidence            489999999999999999999999999999998874333   88889999999999999999999   9999996

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=2.8e-13  Score=74.99  Aligned_cols=70  Identities=30%  Similarity=0.433  Sum_probs=64.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||++++.+..+...+|+++|+=.+|.+.+++-++..+  +.+.....++.||..++.|.|..   .++||||
T Consensus        75 QHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCHqL---HVVHRDL  144 (864)
T KOG4717|consen   75 QHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCHQL---HVVHRDL  144 (864)
T ss_pred             cCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHhhh---hhhcccC
Confidence            6999999999999999999999999999999999886543  88889999999999999999999   9999996

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.46  E-value=1.8e-12  Score=66.70  Aligned_cols=71  Identities=17%  Similarity=0.353  Sum_probs=60.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...+..++++|++.+ ++..++........+.+..+..++.+++.++.|+|+.   +++|+|+
T Consensus        56 ~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl  126 (284)
T cd07836          56 KHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDL  126 (284)
T ss_pred             cCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCC
Confidence            589999999999999999999999984 7777775533223378888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.46  E-value=9.7e-13  Score=68.18  Aligned_cols=72  Identities=26%  Similarity=0.475  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC---------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeE
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE---------ALELNWTNNVNIAKCVAHALSYLHHHCTPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~   71 (75)
                      +|+|++++++.+..++..++++||+.++++..++.....         ...+.......++.+++.|+.|+|+.   +++
T Consensus        75 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~  151 (295)
T cd05097          75 KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFV  151 (295)
T ss_pred             CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Cee
Confidence            589999999999999999999999999999998854211         01256677788999999999999999   999


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      |+|+
T Consensus       152 H~dl  155 (295)
T cd05097         152 HRDL  155 (295)
T ss_pred             cccc
Confidence            9996

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.46  E-value=1.6e-12  Score=71.33  Aligned_cols=69  Identities=20%  Similarity=0.283  Sum_probs=59.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++|++. +++...+.....  .+.+..+..++.|++.|+.|+|..   +|+||||
T Consensus       218 ~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDL  286 (461)
T PHA03211        218 SHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDI  286 (461)
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcC
Confidence            59999999999999999999999985 677777754322  288889999999999999999999   9999996

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.46  E-value=1e-12  Score=66.77  Aligned_cols=70  Identities=26%  Similarity=0.411  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+.. ...++++|+++++++...+..... ..+.+.....++.+++.|+.++|..   +++|+|+
T Consensus        54 ~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di  123 (257)
T cd05040          54 DHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDL  123 (257)
T ss_pred             CCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---Ccccccc
Confidence            58999999999888 889999999999999999876432 2378888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.46  E-value=1.2e-12  Score=67.62  Aligned_cols=72  Identities=38%  Similarity=0.595  Sum_probs=61.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------------cccCCHHhHHHHHHHHHHHhhH
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------------ALELNWTNNVNIAKCVAHALSY   61 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~l~~   61 (75)
                      +|+|++++++.+..+...++++|+++++++..++.....                   ...++...+..++.+++.++.+
T Consensus        66 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~  145 (288)
T cd05050          66 DHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAY  145 (288)
T ss_pred             CCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHH
Confidence            489999999999988899999999999999999864211                   1125667778899999999999


Q ss_pred             hhhCCCCCeEeccC
Q 039179           62 LHHHCTPSIIYRDI   75 (75)
Q Consensus        62 l~~~~~~~i~hrdl   75 (75)
                      +|..   +++|||+
T Consensus       146 lH~~---~i~H~dl  156 (288)
T cd05050         146 LSER---KFVHRDL  156 (288)
T ss_pred             HHhC---Ceecccc
Confidence            9999   9999986

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.46  E-value=4e-13  Score=68.98  Aligned_cols=68  Identities=29%  Similarity=0.417  Sum_probs=60.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++|+++++++...+...    .+....+..++.+++.++.|+|..   +++|+|+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl  127 (277)
T cd06642          60 DSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE---RKIHRDI  127 (277)
T ss_pred             CCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCC
Confidence            4899999999999999999999999999998887542    277888888999999999999999   9999986

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.46  E-value=2.4e-12  Score=66.43  Aligned_cols=70  Identities=30%  Similarity=0.529  Sum_probs=62.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|++.++++.+++....  ..++......++.+++.++.++|..   +++|+|+
T Consensus        73 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl  142 (286)
T cd06614          73 KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDI  142 (286)
T ss_pred             CCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCC
Confidence            48999999999999999999999999999999987643  1288888899999999999999998   9999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.46  E-value=5.4e-13  Score=69.31  Aligned_cols=68  Identities=31%  Similarity=0.568  Sum_probs=60.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|+++++++...+... .   ++...+..++.+++.++.++|+.   +++|+|+
T Consensus        76 ~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~---~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl  143 (297)
T cd06659          76 QHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQT-R---LNEEQIATVCESVLQALCYLHSQ---GVIHRDI  143 (297)
T ss_pred             CCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhhc-C---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            4899999999999999999999999999998877542 2   78888899999999999999999   9999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.46  E-value=1.8e-12  Score=67.22  Aligned_cols=72  Identities=24%  Similarity=0.512  Sum_probs=61.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCc--------ccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEA--------LELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +|+|++++++.+..+...++++|+++++++..++......        ..+.+.....++.+++.++.|+|+.   +++|
T Consensus        77 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H  153 (296)
T cd05095          77 KDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVH  153 (296)
T ss_pred             CCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ceec
Confidence            5899999999999999999999999999999988653211        1245667889999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      +|+
T Consensus       154 ~dl  156 (296)
T cd05095         154 RDL  156 (296)
T ss_pred             ccC
Confidence            986

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.45  E-value=5.2e-13  Score=68.79  Aligned_cols=72  Identities=25%  Similarity=0.357  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++||++++++..++........++...+..++.+++.++.|||. .   +++|+||
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---~i~H~dl  129 (286)
T cd06622          57 VSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH---NIIHRDV  129 (286)
T ss_pred             CCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC---CEeeCCC
Confidence            4899999999999999999999999999998887653222237888999999999999999996 5   8999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.45  E-value=2.4e-13  Score=69.11  Aligned_cols=69  Identities=25%  Similarity=0.298  Sum_probs=62.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++.+..+...++++|++.++++...+.....   +....+..++.+++.++.|+|+.   +++|+|+
T Consensus        58 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl  126 (258)
T cd05578          58 NHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVK---FSEEQVKFWICEIVLALEYLHSK---GIIHRDI  126 (258)
T ss_pred             CCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHhC---CeeccCC
Confidence            589999999999988999999999999999998866422   78888999999999999999999   9999986

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.45  E-value=2.3e-12  Score=66.56  Aligned_cols=69  Identities=23%  Similarity=0.362  Sum_probs=59.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.++...++++||+.+ ++...+.....  .+....+..++.+++.|+.|+|+.   +++|||+
T Consensus        61 ~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl  129 (291)
T cd07844          61 KHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDL  129 (291)
T ss_pred             CCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecccC
Confidence            589999999999999999999999974 88887765332  278888889999999999999999   9999986

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.45  E-value=9.3e-14  Score=77.20  Aligned_cols=68  Identities=26%  Similarity=0.395  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+.++++|.+...+|++.||+.+ ++...+...+.   +++..+..++.++..|+.|||++   +|+|||+
T Consensus        59 kHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~---lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~  126 (808)
T KOG0597|consen   59 KHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGK---LPEEQVRAIAYDLVSALYYLHSN---RILHRDM  126 (808)
T ss_pred             CCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHhc---CcccccC
Confidence            599999999999999999999999976 89888876554   99999999999999999999999   9999985

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.45  E-value=2e-12  Score=66.73  Aligned_cols=70  Identities=21%  Similarity=0.424  Sum_probs=57.2

Q ss_pred             CCCceeeEeeEEee-----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH-----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..     ....++++|++. +++..++..... ..++...+..++.+++.|+.|+|..   +++|||+
T Consensus        62 ~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dl  136 (290)
T cd07862          62 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDL  136 (290)
T ss_pred             CCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCC
Confidence            48999999998853     346889999996 588888765322 2277888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.45  E-value=2e-12  Score=65.52  Aligned_cols=70  Identities=30%  Similarity=0.536  Sum_probs=61.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+......++++|++.++++..++.....  .+.......++.+++.++.++|++   +++|||+
T Consensus        50 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di  119 (251)
T cd05041          50 DHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDL  119 (251)
T ss_pred             CCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhc
Confidence            489999999999999999999999999999998865322  267778888999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=2e-12  Score=66.33  Aligned_cols=68  Identities=32%  Similarity=0.444  Sum_probs=61.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .|+|++++.+.+..+...++++|++.++++...+...    .+++.....++.+++.++.++|..   +++|+|+
T Consensus        60 ~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl  127 (277)
T cd06917          60 QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDI  127 (277)
T ss_pred             CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence            3899999999999888999999999999999887542    278888899999999999999999   9999986

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.45  E-value=1.1e-12  Score=67.10  Aligned_cols=69  Identities=25%  Similarity=0.375  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+.+ ...++++|+++++++..++.....  .+....+..++.+++.++.|+|+.   +++|+|+
T Consensus        65 ~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl  133 (270)
T cd05056          65 DHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESK---RFVHRDI  133 (270)
T ss_pred             CCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence            48999999998875 557899999999999999875332  278888889999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.45  E-value=1.3e-12  Score=66.54  Aligned_cols=69  Identities=30%  Similarity=0.490  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+...+..++++|+++++++.+.+.....   +.......++.+++.++.++|+.   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl  125 (264)
T cd06626          57 KHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRI---LDEHVIRVYTLQLLEGLAYLHSH---GIVHRDI  125 (264)
T ss_pred             CCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCC---CChHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            489999999999988999999999999999999876432   67778888999999999999999   9999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.45  E-value=1.7e-14  Score=85.01  Aligned_cols=69  Identities=32%  Similarity=0.546  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||+++++|+=..++.++++||||.+|+|...+...+.   .++.....+..|++.|+.|||..   +|+|||+
T Consensus      1292 nHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH~~---gIVHRDI 1360 (1509)
T KOG4645|consen 1292 NHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDI 1360 (1509)
T ss_pred             cCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHHhc---CceecCC
Confidence            599999999999999999999999999999999875433   56666777889999999999999   9999996

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.45  E-value=2.2e-12  Score=65.91  Aligned_cols=69  Identities=26%  Similarity=0.368  Sum_probs=59.0

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.++  ...++++|+++++++...+.....   +.......++.+++.++.++|+.   +++|+|+
T Consensus        62 ~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl  132 (265)
T cd06652          62 LHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGA---LTENVTRKYTRQILEGVSYLHSN---MIVHRDI  132 (265)
T ss_pred             CCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence            489999999988764  467899999999999998865433   67778888999999999999999   9999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.45  E-value=1.4e-12  Score=66.38  Aligned_cols=70  Identities=24%  Similarity=0.491  Sum_probs=57.7

Q ss_pred             CCCceeeEeeEEee-CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+.. ++..++++|++.++++..++......  ........++.+++.|+.|+|..   +++|||+
T Consensus        54 ~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  124 (262)
T cd05058          54 SHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHN--PTVKDLIGFGLQVAKGMEYLASK---KFVHRDL  124 (262)
T ss_pred             CCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhC---Ccccccc
Confidence            58999999997754 45678999999999999998653221  55666778889999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.45  E-value=2.1e-12  Score=66.74  Aligned_cols=68  Identities=31%  Similarity=0.542  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|+++++++...+.. ..   ++...+..++.+++.++.++|+.   +++|||+
T Consensus        74 ~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~---~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl  141 (285)
T cd06648          74 QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TR---MNEEQIATVCLAVLKALSFLHAQ---GVIHRDI  141 (285)
T ss_pred             CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            489999999999999999999999999999988865 22   77888889999999999999999   9999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.45  E-value=1.6e-12  Score=66.97  Aligned_cols=72  Identities=21%  Similarity=0.307  Sum_probs=58.3

Q ss_pred             CCCceeeEeeEEe-----eCCeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCL-----HKKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~-----~~~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++++.+.     .++..++++||++++++...+... .....++...+..++.+++.++.|+|..   +++|||
T Consensus        73 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~d  149 (286)
T cd06638          73 DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRD  149 (286)
T ss_pred             cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccC
Confidence            4899999999874     335689999999999998876532 1112267778888999999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       150 l  150 (286)
T cd06638         150 V  150 (286)
T ss_pred             C
Confidence            6

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.45  E-value=1.6e-12  Score=66.80  Aligned_cols=70  Identities=27%  Similarity=0.504  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+++..  +...++++|+++++++..++.....  .++......++.+++.++.++|+.   +++|+|+
T Consensus        64 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl  135 (284)
T cd05038          64 DHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDL  135 (284)
T ss_pred             CCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            48999999998877  4578999999999999999876432  278888899999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.45  E-value=2.4e-12  Score=65.54  Aligned_cols=68  Identities=26%  Similarity=0.447  Sum_probs=59.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+. ....++++|++.++++..++.....   +++.....++.+++.++.++|..   +++|+|+
T Consensus        54 ~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di  121 (257)
T cd05060          54 DHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRRE---IPVSDLKELAHQVAMGMAYLESK---HFVHRDL  121 (257)
T ss_pred             CCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHhhc---CeeccCc
Confidence            4899999999775 4567899999999999999876442   78888999999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.44  E-value=1e-14  Score=83.44  Aligned_cols=69  Identities=20%  Similarity=0.455  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||+++++++|..+. +.++++|++.|+|.++++.++..  +.....+.+..||++||.|||.+   +++||||
T Consensus       756 dHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~--igsq~lLnw~~QIAkgM~YLe~q---rlVHrdL  824 (1177)
T KOG1025|consen  756 DHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDN--IGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDL  824 (1177)
T ss_pred             CCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhc---chhhhhh
Confidence            5999999999998755 77999999999999999986543  88889999999999999999999   9999996

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.44  E-value=2.9e-12  Score=65.98  Aligned_cols=65  Identities=25%  Similarity=0.332  Sum_probs=57.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++||++++++....    .   ++......++.+++.|+.|+|+.   +++|+|+
T Consensus        57 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  121 (279)
T cd06619          57 DSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR----K---IPEHVLGRIAVAVVKGLTYLWSL---KILHRDV  121 (279)
T ss_pred             CCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh----c---CCHHHHHHHHHHHHHHHHHHHHC---CEeeCCC
Confidence            5899999999999999999999999999886542    1   66777888999999999999999   9999986

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.44  E-value=2.8e-12  Score=65.22  Aligned_cols=71  Identities=27%  Similarity=0.461  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEe-eCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCL-HKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+. .++..++++|+++++++..++..... ..+++.....++.+++.++.++|..   +++|||+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  128 (256)
T cd05082          57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDL  128 (256)
T ss_pred             CCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccc
Confidence            4899999998765 44578999999999999999875332 2267788889999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.44  E-value=1.3e-12  Score=70.26  Aligned_cols=68  Identities=24%  Similarity=0.371  Sum_probs=59.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+......++++|++. +++..++.....   +++..+..++.|++.|+.|+|..   +++||||
T Consensus       144 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~---l~~~~~~~i~~ql~~aL~~LH~~---givHrDl  211 (392)
T PHA03207        144 SHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSGP---LPLEQAITIQRRLLEALAYLHGR---GIIHRDV  211 (392)
T ss_pred             CCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            58999999999999899999999986 577777743332   88889999999999999999999   9999996

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.44  E-value=3.5e-12  Score=65.23  Aligned_cols=69  Identities=30%  Similarity=0.454  Sum_probs=59.2

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..  +...++++|+++++++...+.....   +.......++.+++.++.++|+.   +++|+|+
T Consensus        62 ~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l  132 (266)
T cd06651          62 QHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGA---LTESVTRKYTRQILEGMSYLHSN---MIVHRDI  132 (266)
T ss_pred             CCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCC
Confidence            58999999998865  3567899999999999988865433   77888888999999999999999   9999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.44  E-value=2e-12  Score=66.52  Aligned_cols=69  Identities=26%  Similarity=0.424  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|++ ++++...+.....  .+....+..++.+++.++.|+|+.   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  125 (286)
T cd07832          57 QHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEER--PLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDL  125 (286)
T ss_pred             CCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCc
Confidence            4899999999999999999999999 9999988865332  278888999999999999999999   9999986

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.44  E-value=1.8e-12  Score=66.58  Aligned_cols=72  Identities=33%  Similarity=0.571  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-----------cccCCHHhHHHHHHHHHHHhhHhhhCCCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-----------ALELNWTNNVNIAKCVAHALSYLHHHCTPS   69 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~   69 (75)
                      +|+|++++++.+..+...++++|+++++++..++...+.           ...++...+..++.+++.++.++|+.   +
T Consensus        66 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~  142 (280)
T cd05049          66 QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---H  142 (280)
T ss_pred             CCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---C
Confidence            489999999999999999999999999999999865321           12256777888999999999999999   9


Q ss_pred             eEeccC
Q 039179           70 IIYRDI   75 (75)
Q Consensus        70 i~hrdl   75 (75)
                      ++|||+
T Consensus       143 i~h~dl  148 (280)
T cd05049         143 FVHRDL  148 (280)
T ss_pred             eecccc
Confidence            999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.44  E-value=5.5e-13  Score=75.07  Aligned_cols=72  Identities=29%  Similarity=0.497  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-----Cc--------ccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-----EA--------LELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-----~~--------~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      .|+|++.+.|+|..++..+++.||+..|++..+++..+     ..        ..+.....+.++.|++.||.||.+.  
T Consensus       360 ~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~--  437 (609)
T KOG0200|consen  360 KHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV--  437 (609)
T ss_pred             CCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC--
Confidence            59999999999999999999999999999999998755     00        1277788899999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       438 -~~vHRDL  444 (609)
T KOG0200|consen  438 -PCVHRDL  444 (609)
T ss_pred             -Cccchhh
Confidence             9999996

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.44  E-value=5.9e-14  Score=73.45  Aligned_cols=70  Identities=23%  Similarity=0.410  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +++++++++|++.....+|++||||..|++.+.++....  .+.+.++..++...+.|+.|||..   .-+|||+
T Consensus        86 ~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K--~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDI  155 (502)
T KOG0574|consen   86 KSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRK--PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDI  155 (502)
T ss_pred             CCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcC--CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhc
Confidence            368899999999999999999999999999999986443  388999999999999999999998   8889986

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.44  E-value=3.1e-13  Score=69.25  Aligned_cols=69  Identities=25%  Similarity=0.380  Sum_probs=61.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+.+.++|...+.+.+++||++. +++..++....  .+....+..+..++..|+.|+|.+   .|+|||+
T Consensus        59 ~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vIkd~~i--~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDl  127 (318)
T KOG0659|consen   59 KHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVIKDKNI--ILSPADIKSYMLMTLKGLAYCHSK---WILHRDL  127 (318)
T ss_pred             cCcchhhhhhhccCCCceEEEEEeccc-cHHHHhccccc--ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccC
Confidence            599999999999999999999999975 88888876433  278889999999999999999999   9999996

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.44  E-value=2.6e-12  Score=65.24  Aligned_cols=70  Identities=24%  Similarity=0.552  Sum_probs=61.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++++.+......++++|++.++++...+.....  .+....+..++.+++.++.++|+.   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl  126 (256)
T cd05112          57 SHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLESS---NVIHRDL  126 (256)
T ss_pred             CCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC---Ccccccc
Confidence            489999999999988899999999999999988865332  267788888999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.43  E-value=1.1e-12  Score=67.75  Aligned_cols=69  Identities=25%  Similarity=0.271  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++.+.+..+...++++||+.++++...+.....   +....+..++.|++.++.++|..   +++|+|+
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl  131 (288)
T cd05583          63 RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREH---FTESEVRVYIAEIVLALDHLHQL---GIIYRDI  131 (288)
T ss_pred             CCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCC---cCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            489999999999888899999999999999988865432   77888888999999999999998   9999986

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.43  E-value=8.1e-13  Score=69.62  Aligned_cols=69  Identities=19%  Similarity=0.315  Sum_probs=57.3

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+.+-.+....  +.+|++|||+.. ++...+..-..  .+...++..+..|++.|+.|||++   .|+||||
T Consensus       133 ~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q--~F~~~evK~L~~QlL~glk~lH~~---wilHRDL  203 (419)
T KOG0663|consen  133 RHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQ--PFLPGEVKTLMLQLLRGLKHLHDN---WILHRDL  203 (419)
T ss_pred             CCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHhhc---eeEeccc
Confidence            599999998887754  479999999965 66666655332  288888999999999999999999   9999997

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.43  E-value=9.9e-13  Score=66.71  Aligned_cols=71  Identities=20%  Similarity=0.360  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|+++++++...+..... ..+.+.....++.+++.++.|+|..   +++|+|+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl  127 (257)
T cd08225          57 KHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDI  127 (257)
T ss_pred             CCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccC
Confidence            489999999999999999999999999999998865332 2267888889999999999999999   9999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.43  E-value=2.7e-12  Score=65.23  Aligned_cols=70  Identities=24%  Similarity=0.499  Sum_probs=59.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+ ..++++|+++++++...+..... ..++......++.+++.++.++|..   +++|||+
T Consensus        57 ~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl  126 (254)
T cd05083          57 HHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDL  126 (254)
T ss_pred             CCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence            589999999988754 46899999999999999875332 2267888888999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.43  E-value=2.2e-12  Score=65.41  Aligned_cols=71  Identities=34%  Similarity=0.591  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+...+..++++|+++++++...+...... .+++.....++.+++.++.++|+.   +++|+|+
T Consensus        59 ~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl  129 (258)
T smart00219       59 DHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESK---NFIHRDL  129 (258)
T ss_pred             CCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcC---Ceeeccc
Confidence            4899999999999989999999999999999998653321 177888899999999999999999   9999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.43  E-value=2.4e-12  Score=66.24  Aligned_cols=71  Identities=24%  Similarity=0.411  Sum_probs=59.0

Q ss_pred             CCCceeeEeeEEee------CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLH------KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++++.+..      ....++++|++++|++...+..... ..+....+..++.|++.++.|+|+.   +++|+|
T Consensus        71 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~d  146 (282)
T cd06636          71 HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAH---KVIHRD  146 (282)
T ss_pred             CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCC
Confidence            48999999998853      3578999999999999998865332 2267777888899999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       147 l  147 (282)
T cd06636         147 I  147 (282)
T ss_pred             C
Confidence            6

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.43  E-value=3.8e-12  Score=64.90  Aligned_cols=70  Identities=24%  Similarity=0.473  Sum_probs=58.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+. ....++++|++.++++.+.+..... ..++...+..++.+++.++.|+|+.   +++|+|+
T Consensus        59 ~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl  128 (260)
T cd05069          59 RHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDL  128 (260)
T ss_pred             CCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccc
Confidence            4899999998775 4567899999999999998865322 2267788889999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.42  E-value=3.6e-12  Score=65.17  Aligned_cols=72  Identities=25%  Similarity=0.368  Sum_probs=60.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++||++++++...+... .....++......++.+++.++.++|. .   +++|+|+
T Consensus        67 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl  140 (269)
T cd08528          67 RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDL  140 (269)
T ss_pred             CCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCC
Confidence            4899999999999999999999999999998877431 111237788888999999999999996 5   7999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.42  E-value=4e-12  Score=65.19  Aligned_cols=68  Identities=32%  Similarity=0.392  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++|+++++++...+...    .++...+..++.+++.++.++|..   +++|+|+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl  124 (274)
T cd06609          57 RSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDI  124 (274)
T ss_pred             CCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            4899999999999999999999999999999988653    278889999999999999999999   9999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.42  E-value=3.6e-12  Score=65.56  Aligned_cols=69  Identities=20%  Similarity=0.399  Sum_probs=58.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.. ...++++|++++|++...+.....  .++......++.+++.|+.|+|+.   +++|||+
T Consensus        67 ~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dl  135 (279)
T cd05109          67 GSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDL  135 (279)
T ss_pred             CCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---Ceecccc
Confidence            48999999998875 446789999999999998865322  278888999999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.42  E-value=3e-12  Score=65.32  Aligned_cols=70  Identities=21%  Similarity=0.432  Sum_probs=59.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.. ...++++|+++++++.+++..... ..++...+..++.+++.++.++|..   +++|+|+
T Consensus        59 ~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl  128 (260)
T cd05073          59 QHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDL  128 (260)
T ss_pred             CCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHhC---Ccccccc
Confidence            48999999998877 678999999999999999876332 2267777888999999999999998   9999996

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.42  E-value=3.7e-12  Score=65.41  Aligned_cols=69  Identities=19%  Similarity=0.300  Sum_probs=58.6

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+.++  +..++++|++. +++...+.....  .+++..+..++.+++.|+.++|..   +++|||+
T Consensus        56 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl  126 (282)
T cd07831          56 PHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKR--PLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDI  126 (282)
T ss_pred             CCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---Cceeccc
Confidence            389999999999887  78999999997 577777654322  278889999999999999999999   9999986

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.41  E-value=4.6e-13  Score=72.74  Aligned_cols=71  Identities=28%  Similarity=0.548  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhC------CCCCe
Q 039179            1 QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHH------CTPSI   70 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~------~~~~i   70 (75)
                      +|+||+++++.-....    ..+++++|.+.|+|.++++.+.    +.+....+++..++.|+.|||+.      .+|+|
T Consensus       262 ~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~I  337 (534)
T KOG3653|consen  262 KHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPI  337 (534)
T ss_pred             cchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcc
Confidence            5899999988765444    7899999999999999998643    88999999999999999999973      34579


Q ss_pred             EeccC
Q 039179           71 IYRDI   75 (75)
Q Consensus        71 ~hrdl   75 (75)
                      +|||+
T Consensus       338 aHRDl  342 (534)
T KOG3653|consen  338 AHRDL  342 (534)
T ss_pred             ccccc
Confidence            99996

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.41  E-value=4.7e-12  Score=65.11  Aligned_cols=72  Identities=32%  Similarity=0.529  Sum_probs=60.2

Q ss_pred             CCCceeeEeeEEee-CCeEEEEEecCCCCCHHHHhhccCCc-----ccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENEA-----LELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++++.+.. +...++++++++++++..++......     ..+.......++.+++.|+.|||+.   +++|+|
T Consensus        66 ~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~d  142 (280)
T cd05043          66 SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKD  142 (280)
T ss_pred             CCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecc
Confidence            58999999998776 46788999999999999988653211     2377888899999999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       143 i  143 (280)
T cd05043         143 I  143 (280)
T ss_pred             c
Confidence            6

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.41  E-value=4.7e-12  Score=64.55  Aligned_cols=70  Identities=29%  Similarity=0.514  Sum_probs=59.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++++.+. ....++++|++.++++...+..... ..++......++.+++.++.|+|+.   +++|||+
T Consensus        59 ~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di  128 (260)
T cd05070          59 RHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDL  128 (260)
T ss_pred             CCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            4899999998775 4568899999999999998865322 2278888899999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.41  E-value=6.7e-12  Score=64.14  Aligned_cols=69  Identities=29%  Similarity=0.414  Sum_probs=59.1

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.+.  ...++++|+++++++...+.....   +.......++.+++.++.++|+.   +++|+|+
T Consensus        62 ~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl  132 (264)
T cd06653          62 RHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGA---LTENVTRRYTRQILQGVSYLHSN---MIVHRDI  132 (264)
T ss_pred             CCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence            489999999988764  467899999999999988865433   77788888999999999999999   9999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.41  E-value=3.1e-12  Score=74.48  Aligned_cols=72  Identities=21%  Similarity=0.371  Sum_probs=59.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC--------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE--------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +|||++++++.+.+++..++++||++++++...+.....        ...........++.+++.|+.|+|+.   +++|
T Consensus        60 ~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIH  136 (932)
T PRK13184         60 IHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLH  136 (932)
T ss_pred             CCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence            489999999999999999999999999999988764211        01134456678889999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      ||+
T Consensus       137 RDL  139 (932)
T PRK13184        137 RDL  139 (932)
T ss_pred             cCC
Confidence            996

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.41  E-value=3.9e-12  Score=65.50  Aligned_cols=69  Identities=29%  Similarity=0.380  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..++..++++|++.++.+.........   +....+..++.+++.++.|+|..   +++|+|+
T Consensus        58 ~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl  126 (288)
T cd07833          58 RHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGG---LPPDAVRSYIWQLLQAIAYCHSH---NIIHRDI  126 (288)
T ss_pred             CCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            489999999999999999999999998777665543222   78888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.41  E-value=6.9e-13  Score=68.26  Aligned_cols=69  Identities=23%  Similarity=0.389  Sum_probs=60.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++||+.++.+.........   +.+.....++.+++.++.|||+.   +++|+|+
T Consensus        58 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l  126 (286)
T cd07846          58 RHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNG---LDESRVRKYLFQILRGIEFCHSH---NIIHRDI  126 (286)
T ss_pred             CCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            489999999999999999999999999888876654322   78888999999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.41  E-value=3.9e-12  Score=66.04  Aligned_cols=68  Identities=29%  Similarity=0.510  Sum_probs=60.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++||++++++...+... .   +.......++.+++.++.|+|+.   +++|+|+
T Consensus        75 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~---~~~~~~~~~~~ql~~~l~~lH~~---givH~dl  142 (292)
T cd06657          75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-R---MNEEQIAAVCLAVLKALSVLHAQ---GVIHRDI  142 (292)
T ss_pred             CCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC-C---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            4899999999999999999999999999998876432 2   77888888999999999999999   9999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.41  E-value=5.4e-12  Score=64.10  Aligned_cols=71  Identities=27%  Similarity=0.337  Sum_probs=59.6

Q ss_pred             CCCceeeEeeEEee-CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.. +...++++|+++++++...+..... ..+++..+..++.+++.++.++|+.   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~-~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di  128 (257)
T cd08223          57 KHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKG-KLLPENQVVEWFVQIAMALQYLHEK---HILHRDL  128 (257)
T ss_pred             CCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCC
Confidence            48999999988764 4467899999999999988875322 2378888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=6.8e-12  Score=63.48  Aligned_cols=69  Identities=32%  Similarity=0.443  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.+++..++++|++.++++...+.....   +++.....++.+++.++.++|+.   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  125 (254)
T cd06627          57 KHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGP---FPESLVAVYVYQVLQGLAYLHEQ---GVIHRDI  125 (254)
T ss_pred             CCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHhhC---CcccCCC
Confidence            489999999999999999999999999999998876432   78888899999999999999999   9999986

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.40  E-value=6.6e-12  Score=64.97  Aligned_cols=69  Identities=19%  Similarity=0.310  Sum_probs=59.1

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+  ...++++|++. +++...+.....  .+.......++.+++.|+.|||+.   +++|+|+
T Consensus        62 ~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl  132 (293)
T cd07843          62 QHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDL  132 (293)
T ss_pred             CCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccC
Confidence            489999999998877  78999999997 488777755332  278889999999999999999999   9999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.40  E-value=4.1e-12  Score=64.94  Aligned_cols=70  Identities=26%  Similarity=0.479  Sum_probs=58.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+. ....++++|+++++++..++..... ..++......++.+++.++.++|+.   +++|+|+
T Consensus        59 ~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl  128 (262)
T cd05071          59 RHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL  128 (262)
T ss_pred             CCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---Ccccccc
Confidence            4899999998774 4567899999999999999875322 2267788889999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.40  E-value=3.5e-12  Score=74.74  Aligned_cols=75  Identities=24%  Similarity=0.398  Sum_probs=60.2

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCC----CCeEec
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCT----PSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~----~~i~hr   73 (75)
                      +||||+++++.+...  ..+++++||+.+++|...+.... ....+++..+..++.|++.|+.|||....    .+|+||
T Consensus        70 ~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHR  149 (1021)
T PTZ00266         70 KHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHR  149 (1021)
T ss_pred             CCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceec
Confidence            589999999988653  56899999999999999886521 11238888999999999999999998421    159999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      ||
T Consensus       150 DL  151 (1021)
T PTZ00266        150 DL  151 (1021)
T ss_pred             cC
Confidence            97

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.40  E-value=2.8e-12  Score=66.77  Aligned_cols=69  Identities=23%  Similarity=0.470  Sum_probs=58.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+ ...+++|++++|++...+.....  .++......++.+++.|+.|+|..   +++|+|+
T Consensus        67 ~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~di  135 (303)
T cd05110          67 DHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDL  135 (303)
T ss_pred             CCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHhhc---Ceecccc
Confidence            589999999988754 46688999999999998865332  277888889999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=4.2e-12  Score=64.85  Aligned_cols=72  Identities=25%  Similarity=0.394  Sum_probs=59.8

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEec
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hr   73 (75)
                      +|+|++++++.+....      ..++++|++.++++...+.... ....+....+..++.|++.++.|+|+.   +++|+
T Consensus        61 ~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~  137 (275)
T cd06608          61 NHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHR  137 (275)
T ss_pred             CCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccC
Confidence            4899999999997644      4899999999999988876522 112378888899999999999999999   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      |+
T Consensus       138 ~l  139 (275)
T cd06608         138 DI  139 (275)
T ss_pred             CC
Confidence            86

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.40  E-value=3e-12  Score=65.27  Aligned_cols=70  Identities=31%  Similarity=0.423  Sum_probs=61.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|++.++++...+.....  .++......++.+++.++.++|+ .   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl  127 (265)
T cd06605          57 NSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQG--RIPERILGKIAVAVLKGLTYLHEKH---KIIHRDV  127 (265)
T ss_pred             CCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCC
Confidence            489999999999999999999999999999998875422  27888888999999999999999 8   9999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.40  E-value=6.1e-12  Score=65.03  Aligned_cols=72  Identities=35%  Similarity=0.427  Sum_probs=58.5

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+...  ...++++|+++++++...+... .....++......++.+++.++.|+|..   +++|+|+
T Consensus        57 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl  131 (287)
T cd06621          57 KSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDI  131 (287)
T ss_pred             CCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            589999999988653  3689999999999998776531 1122267778889999999999999999   9999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.40  E-value=8.5e-12  Score=64.51  Aligned_cols=72  Identities=24%  Similarity=0.312  Sum_probs=59.0

Q ss_pred             CCCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++++.+...     +..++++||+.++++...+... .....+.+..+..++.+++.++.++|..   +++|+|
T Consensus        77 ~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~d  153 (291)
T cd06639          77 NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRD  153 (291)
T ss_pred             CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccC
Confidence            489999999988753     3589999999999998887531 1112377888889999999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       154 l  154 (291)
T cd06639         154 V  154 (291)
T ss_pred             C
Confidence            6

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.40  E-value=7.6e-12  Score=63.77  Aligned_cols=70  Identities=27%  Similarity=0.548  Sum_probs=58.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+. ....++++|++.++++...+..... ..++......++.+++.++.|||+.   +++|+|+
T Consensus        59 ~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl  128 (260)
T cd05067          59 QHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDL  128 (260)
T ss_pred             CCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcC---Ceecccc
Confidence            5899999998764 4568999999999999988865332 2377888888999999999999999   9999986

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.40  E-value=1.8e-12  Score=66.76  Aligned_cols=69  Identities=22%  Similarity=0.389  Sum_probs=59.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+.+....++++||+. +++...+.....  .++...+..++.|++.|+.|+|..   +++|||+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl  125 (284)
T cd07839          57 KHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDL  125 (284)
T ss_pred             CCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCC
Confidence            58999999999999999999999997 467776654322  278888999999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.39  E-value=9.7e-13  Score=67.39  Aligned_cols=69  Identities=29%  Similarity=0.406  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|++.++++...+.....   ++......++.+++.++.++|+.   +++|+|+
T Consensus        60 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl  128 (280)
T cd05581          60 GHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGS---LDEKCTRFYAAEILLALEYLHSK---GIIHRDL  128 (280)
T ss_pred             cCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeecCC
Confidence            389999999999988999999999999999999876433   88899999999999999999999   9999986

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.39  E-value=3e-13  Score=76.73  Aligned_cols=70  Identities=27%  Similarity=0.453  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|+++++|+..+ ..+.+++|+++.|+|.+.+++... ..+.......++.|++.||.||..+   ++|||||
T Consensus       169 ~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~-~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDL  238 (1039)
T KOG0199|consen  169 QHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKK-AILLVSRLCDYAMQIAKAMQYLESK---RLVHRDL  238 (1039)
T ss_pred             cCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccc-cceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhh
Confidence            59999999999987 778899999999999999988322 2277778888999999999999999   9999996

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.39  E-value=6.8e-12  Score=64.15  Aligned_cols=72  Identities=25%  Similarity=0.449  Sum_probs=59.1

Q ss_pred             CCCceeeEeeEEeeCCe------EEEEEecCCCCCHHHHhhccC---CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeE
Q 039179            1 QHQNIVKLYGFCLHKKC------MFAIYKYMERGSLCCVLHKEN---EALELNWTNNVNIAKCVAHALSYLHHHCTPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~------~~~~~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~   71 (75)
                      +|+|++++++.+.....      .++++||++++++...+....   ....++......++.+++.|+.|+|+.   +++
T Consensus        59 ~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~  135 (273)
T cd05035          59 DHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFI  135 (273)
T ss_pred             CCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence            58999999998866543      689999999999988875421   112377888889999999999999999   999


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      |||+
T Consensus       136 H~dl  139 (273)
T cd05035         136 HRDL  139 (273)
T ss_pred             cccc
Confidence            9996

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.39  E-value=7e-12  Score=66.02  Aligned_cols=68  Identities=21%  Similarity=0.278  Sum_probs=59.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..++..++++|++. +++...+.....   ++......++.+++.++.++|..   +++|+|+
T Consensus        78 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl  145 (335)
T PTZ00024         78 KHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIR---LTESQVKCILLQILNGLNVLHKW---YFMHRDL  145 (335)
T ss_pred             CCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence            48999999999999999999999996 688887765332   78888899999999999999999   9999986

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.39  E-value=4e-12  Score=71.92  Aligned_cols=67  Identities=19%  Similarity=0.274  Sum_probs=61.1

Q ss_pred             CceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            3 QNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         3 ~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +=+++|+-+|.+.+.+|++|+|+++|++..++-..+-   +.+....+++..+.+++.+.|..   ++|||||
T Consensus       689 ~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgI---FeE~LARFYIAEltcAiesVHkm---GFIHRDi  755 (1034)
T KOG0608|consen  689 EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI---FEEDLARFYIAELTCAIESVHKM---GFIHRDI  755 (1034)
T ss_pred             cceEEEEEEeccCCceEEEEeccCCccHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHhc---cceeccc
Confidence            4589999999999999999999999999999877554   78888889999999999999999   9999997

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.39  E-value=6.8e-12  Score=64.21  Aligned_cols=72  Identities=28%  Similarity=0.436  Sum_probs=57.4

Q ss_pred             CCCceeeEeeEEeeC------CeEEEEEecCCCCCHHHHhhccC---CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeE
Q 039179            1 QHQNIVKLYGFCLHK------KCMFAIYKYMERGSLCCVLHKEN---EALELNWTNNVNIAKCVAHALSYLHHHCTPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~------~~~~~~~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~   71 (75)
                      +|+|++++++.+...      ...++++||+.+|++..++....   ....++......++.+++.|+.|+|..   +++
T Consensus        58 ~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~  134 (272)
T cd05075          58 DHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFI  134 (272)
T ss_pred             CCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence            589999999987532      24689999999999988774321   122367888889999999999999999   999


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      |||+
T Consensus       135 H~dl  138 (272)
T cd05075         135 HRDL  138 (272)
T ss_pred             cccc
Confidence            9996

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.39  E-value=1.2e-11  Score=64.09  Aligned_cols=70  Identities=21%  Similarity=0.369  Sum_probs=57.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++||+. +++...+..... ..+....+..++.+++.|+.|+|+.   +++|+|+
T Consensus        59 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl  128 (294)
T PLN00009         59 QHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDL  128 (294)
T ss_pred             cCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence            48999999999999999999999996 577776654322 1246677778899999999999999   9999986

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.38  E-value=2.9e-12  Score=68.38  Aligned_cols=68  Identities=19%  Similarity=0.319  Sum_probs=57.6

Q ss_pred             CCCceeeEeeEEeeCC-----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK-----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..+.     ..++++||+. +++...+.....   +....+..++.|++.|+.|+|..   +++||||
T Consensus        57 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dl  129 (372)
T cd07853          57 KHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQP---LSSDHVKVFLYQILRGLKYLHSA---GILHRDI  129 (372)
T ss_pred             CCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence            5899999999998766     7899999986 567666654332   78888999999999999999999   9999996

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.38  E-value=5.1e-14  Score=72.77  Aligned_cols=75  Identities=17%  Similarity=0.250  Sum_probs=60.3

Q ss_pred             CCCceeeEee-EEeeCCe-EEEEEecCCCCCHHHHhhc-cCCcccCCHHhHHHHHHHHHHHhhHhhhCCCC-CeEeccC
Q 039179            1 QHQNIVKLYG-FCLHKKC-MFAIYKYMERGSLCCVLHK-ENEALELNWTNNVNIAKCVAHALSYLHHHCTP-SIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~-~~~~~~~-~~~~~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~i~hrdl   75 (75)
                      +||||+++++ .+..++. ++++||+|..|++.+.++. ......+++..++.++.|++.++..+|...+. .++||||
T Consensus        76 ~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDI  154 (375)
T KOG0591|consen   76 NHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDI  154 (375)
T ss_pred             CCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccC
Confidence            5999999998 5555555 8999999999999999975 22233489999999999999999999983222 3899996

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.38  E-value=7.5e-12  Score=64.45  Aligned_cols=72  Identities=25%  Similarity=0.389  Sum_probs=60.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-------------CcccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-------------EALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|+||+++++.+......++++|++.++++..++....             ....++......++.|++.|+.|+|+.  
T Consensus        66 ~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~--  143 (283)
T cd05091          66 QHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH--  143 (283)
T ss_pred             CCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc--
Confidence            48999999999999889999999999999988875211             011256677788999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       144 -gi~H~dl  150 (283)
T cd05091         144 -HVVHKDL  150 (283)
T ss_pred             -Ccccccc
Confidence             9999996

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.38  E-value=9.3e-12  Score=64.38  Aligned_cols=69  Identities=25%  Similarity=0.339  Sum_probs=57.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++|++. +++...+.....  .+....+..++.+++.|+.|+|..   +++|+|+
T Consensus        61 ~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl  129 (291)
T cd07870          61 KHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDL  129 (291)
T ss_pred             CCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            58999999999999889999999996 666666543222  266777788899999999999999   9999996

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.38  E-value=1.2e-11  Score=62.51  Aligned_cols=69  Identities=32%  Similarity=0.479  Sum_probs=61.8

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...  ...++++|++.++++.+++....   .+.+.....++.+++.++.|+|+.   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl  127 (260)
T cd06606          57 QHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDI  127 (260)
T ss_pred             CCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            489999999999888  78999999999999999987643   288888999999999999999998   9999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.38  E-value=3.3e-12  Score=65.74  Aligned_cols=70  Identities=17%  Similarity=0.313  Sum_probs=59.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.++...++++|++. +++...+..... ..++......++.+++.|+.|+|..   +++|+|+
T Consensus        57 ~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l  126 (284)
T cd07860          57 NHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDL  126 (284)
T ss_pred             CCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            58999999999999899999999996 578777754322 2278888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.38  E-value=1.2e-11  Score=64.85  Aligned_cols=71  Identities=21%  Similarity=0.380  Sum_probs=58.2

Q ss_pred             CCCc-eeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCc-ccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQN-IVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEA-LELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~-i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +|+| |+++.+++.+.+      .+++++|++.. ++.+++...... ..++...+..+..|++.|+.|+|++   +|+|
T Consensus        68 ~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlH  143 (323)
T KOG0594|consen   68 SHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILH  143 (323)
T ss_pred             CCCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence            4677 999999998877      78899999964 777777654321 2366678889999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      |||
T Consensus       144 RDL  146 (323)
T KOG0594|consen  144 RDL  146 (323)
T ss_pred             ccC
Confidence            997

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.38  E-value=7.9e-12  Score=64.28  Aligned_cols=72  Identities=26%  Similarity=0.339  Sum_probs=58.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|+++ +++...+... .....+++..+..++.|++.|+.|+|+++  +++|||+
T Consensus        58 ~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dl  130 (283)
T cd06617          58 DCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDV  130 (283)
T ss_pred             CCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCC
Confidence            48999999999999899999999996 6777666542 12223788888999999999999999742  7999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.38  E-value=6.8e-12  Score=65.40  Aligned_cols=69  Identities=28%  Similarity=0.434  Sum_probs=58.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++|++. |++...+.....  .+.+..+..++.|++.++.|+|+.   +++|+|+
T Consensus        73 ~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl  141 (307)
T cd06607          73 RHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHSH---ERIHRDI  141 (307)
T ss_pred             CCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCC
Confidence            58999999999999999999999997 566555543222  278888899999999999999999   9999986

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.37  E-value=1.1e-11  Score=62.68  Aligned_cols=72  Identities=28%  Similarity=0.401  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++|+++++++...+.... ....++......++.+++.|+.++|..   +++|+|+
T Consensus        57 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl  129 (258)
T cd08215          57 NHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDI  129 (258)
T ss_pred             CCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccC
Confidence            48999999999999899999999999999999887632 113378889999999999999999999   9999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.37  E-value=1.5e-11  Score=64.49  Aligned_cols=69  Identities=28%  Similarity=0.450  Sum_probs=58.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++||+. |++...+.....  .+++..+..++.+++.++.|+|..   +++|+|+
T Consensus        83 ~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL  151 (317)
T cd06635          83 KHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NMIHRDI  151 (317)
T ss_pred             CCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            48999999999999999999999997 466666544322  278888888999999999999999   9999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.37  E-value=9.1e-12  Score=65.90  Aligned_cols=72  Identities=26%  Similarity=0.429  Sum_probs=58.7

Q ss_pred             CCCceeeEeeEEeeC-CeEEEEEecCCCCCHHHHhhccCC----------------------------------------
Q 039179            1 QHQNIVKLYGFCLHK-KCMFAIYKYMERGSLCCVLHKENE----------------------------------------   39 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~~~~~~----------------------------------------   39 (75)
                      +|+||+++++++... ...++++||++++++...+.....                                        
T Consensus        69 ~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (337)
T cd05054          69 HHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFI  148 (337)
T ss_pred             cCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccc
Confidence            489999999988654 568899999999999988854211                                        


Q ss_pred             ------------------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           40 ------------------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        40 ------------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                                        ...+++..+..++.+++.++.|+|..   +++|||+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDi  199 (337)
T cd05054         149 EDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDL  199 (337)
T ss_pred             cCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence                              01367777888999999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.36  E-value=1.4e-11  Score=63.59  Aligned_cols=70  Identities=23%  Similarity=0.381  Sum_probs=56.7

Q ss_pred             CCCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++...     ...++++|++. +++..++..... ..++...+..++.|++.|+.|+|+.   +++|||+
T Consensus        60 ~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~di  134 (288)
T cd07863          60 DHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDL  134 (288)
T ss_pred             CCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            489999999987642     35789999997 477777755322 2278888999999999999999999   9999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.35  E-value=3.5e-12  Score=64.52  Aligned_cols=69  Identities=32%  Similarity=0.418  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|++.++++...+.....   ++......++.+++.++.++|..   +++|+|+
T Consensus        51 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l  119 (250)
T cd05123          51 NHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGR---FSEERARFYAAEIVLALEYLHSL---GIIYRDL  119 (250)
T ss_pred             CCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CceecCC
Confidence            489999999999989999999999999999998875432   78888899999999999999998   9999986

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.35  E-value=7.3e-12  Score=66.30  Aligned_cols=72  Identities=24%  Similarity=0.381  Sum_probs=57.0

Q ss_pred             CCCceeeEeeEEeeC-CeEEEEEecCCCCCHHHHhhccCC----------------------------------------
Q 039179            1 QHQNIVKLYGFCLHK-KCMFAIYKYMERGSLCCVLHKENE----------------------------------------   39 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~~~~~~----------------------------------------   39 (75)
                      +|+|++++++.+... ...++++||+++|++..++.....                                        
T Consensus        69 ~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (343)
T cd05103          69 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSA  148 (343)
T ss_pred             CCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccc
Confidence            479999999988654 467899999999999988864210                                        


Q ss_pred             ------------------------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           40 ------------------------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        40 ------------------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                                              ...++......++.+++.|+.|+|+.   +++|||+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di  205 (343)
T cd05103         149 SSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDL  205 (343)
T ss_pred             cccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence                                    01245566677889999999999999   9999996

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.35  E-value=1.6e-11  Score=63.52  Aligned_cols=70  Identities=14%  Similarity=0.270  Sum_probs=57.2

Q ss_pred             CCceeeEeeEEeeCCe-----EEEEEecCCCCCHHHHhhccCC--cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            2 HQNIVKLYGFCLHKKC-----MFAIYKYMERGSLCCVLHKENE--ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~-----~~~~~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      |+|++++++.+.....     .++++||+.+ ++..++.....  ...+++..+..++.+++.|+.|+|..   +++|||
T Consensus        60 ~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~d  135 (295)
T cd07837          60 SIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRD  135 (295)
T ss_pred             CCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecC
Confidence            6899999998877655     8999999985 77777654221  22368888899999999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       136 l  136 (295)
T cd07837         136 L  136 (295)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.35  E-value=1.7e-11  Score=63.91  Aligned_cols=71  Identities=20%  Similarity=0.412  Sum_probs=57.2

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccC--CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKEN--EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++.+.+...  ...++++|++.+ ++...+....  ....++...+..++.|++.++.|+|..   +++|||+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dl  134 (316)
T cd07842          60 KHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDL  134 (316)
T ss_pred             CCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCC
Confidence            589999999999987  789999999975 5555554321  112377888889999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.35  E-value=3.3e-11  Score=60.75  Aligned_cols=70  Identities=36%  Similarity=0.538  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++.+.+..+...++++|+++++++.+.+....  ..++......++.+++.++.++|..   +++|+|+
T Consensus        55 ~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl  124 (253)
T cd05122          55 KHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDI  124 (253)
T ss_pred             CCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCC
Confidence            48999999999999999999999999999999887642  2278888999999999999999998   9999986

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.35  E-value=1.4e-12  Score=66.39  Aligned_cols=72  Identities=24%  Similarity=0.347  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++.+.+....++++|+++++++...+... .....+++.....++.+++.++.++|+.   +++|+|+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l  132 (260)
T cd08222          60 DHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDL  132 (260)
T ss_pred             CCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCC
Confidence            4899999999998888899999999999998887542 1112378888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.34  E-value=1.3e-11  Score=67.35  Aligned_cols=71  Identities=17%  Similarity=0.244  Sum_probs=53.9

Q ss_pred             CCCceeeEeeEEeeC--------CeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeE
Q 039179            1 QHQNIVKLYGFCLHK--------KCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--------~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~   71 (75)
                      +|+|++++.+++...        ...++++||+++ ++...+... .....++...+..++.|++.|+.|||..   +|+
T Consensus       117 ~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~Ii  192 (440)
T PTZ00036        117 NHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FIC  192 (440)
T ss_pred             CCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEe
Confidence            599999998876432        246789999975 665555421 1122378888889999999999999999   999


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      ||||
T Consensus       193 HrDL  196 (440)
T PTZ00036        193 HRDL  196 (440)
T ss_pred             cCCc
Confidence            9997

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.34  E-value=1.9e-12  Score=68.83  Aligned_cols=69  Identities=23%  Similarity=0.408  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||+++-+..+|.+...++.+.||.++|.+.-.++..+.   +++..+..+...++.++.|||.+   +|++||+
T Consensus       309 n~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrk---lpeeharfys~ei~lal~flh~r---giiyrdl  377 (593)
T KOG0695|consen  309 NNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEICLALNFLHER---GIIYRDL  377 (593)
T ss_pred             CCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhc---CcHHHhhhhhHHHHHHHHHHhhc---Ceeeeec
Confidence            479999999999999999999999999999888876544   89999999999999999999999   9999996

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.33  E-value=3.5e-11  Score=63.00  Aligned_cols=69  Identities=28%  Similarity=0.456  Sum_probs=58.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.+....++++|++. |++...+.....  .++...+..++.+++.++.|+|..   +++|+|+
T Consensus        79 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl  147 (313)
T cd06633          79 KHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NMIHRDI  147 (313)
T ss_pred             CCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            58999999999999999999999996 566666644222  277888888999999999999999   9999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.33  E-value=2.1e-11  Score=61.96  Aligned_cols=72  Identities=24%  Similarity=0.365  Sum_probs=59.1

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhh-----hCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLH-----HHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~-----~~~~~~i~h   72 (75)
                      +|+|++++++.+..  +...++++|+++++++..++.... ....++......++.+++.++.++|     +.   +++|
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h  133 (265)
T cd08217          57 KHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLH  133 (265)
T ss_pred             CCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---ccee
Confidence            48999999998764  346789999999999998886531 1223788888999999999999999     76   8999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      +|+
T Consensus       134 ~dl  136 (265)
T cd08217         134 RDL  136 (265)
T ss_pred             cCC
Confidence            986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.31  E-value=4.1e-11  Score=62.60  Aligned_cols=69  Identities=25%  Similarity=0.450  Sum_probs=58.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+++..+...++++|++. |++...+.....  .+....+..++.+++.++.|+|..   +++|+|+
T Consensus        73 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl  141 (308)
T cd06634          73 RHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDV  141 (308)
T ss_pred             CCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            48999999999999999999999996 577666543222  277888888999999999999999   9999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.31  E-value=2.5e-11  Score=62.99  Aligned_cols=69  Identities=25%  Similarity=0.466  Sum_probs=56.4

Q ss_pred             CCCceeeEeeEEeeCC----------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCe
Q 039179            1 QHQNIVKLYGFCLHKK----------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSI   70 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i   70 (75)
                      +|||++++++.+.+..          ..++++|++++ ++...+....  ..++...+..++.+++.|+.|||+.   ++
T Consensus        64 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~i  137 (302)
T cd07864          64 NHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKK---NF  137 (302)
T ss_pred             CCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            5899999999887654          68999999976 6656654422  1278889999999999999999999   99


Q ss_pred             EeccC
Q 039179           71 IYRDI   75 (75)
Q Consensus        71 ~hrdl   75 (75)
                      +|+|+
T Consensus       138 ~H~dl  142 (302)
T cd07864         138 LHRDI  142 (302)
T ss_pred             ecCCC
Confidence            99986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.31  E-value=3.7e-11  Score=62.85  Aligned_cols=71  Identities=18%  Similarity=0.393  Sum_probs=55.6

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhccC------CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKEN------EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +||||+++.+.+..  +...++++|++. +++...+....      ....++...+..++.|++.|+.|||+.   +++|
T Consensus        56 ~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH  131 (317)
T cd07868          56 KHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLH  131 (317)
T ss_pred             CCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEc
Confidence            58999999998864  356889999986 46766654321      112367788889999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      |||
T Consensus       132 rDl  134 (317)
T cd07868         132 RDL  134 (317)
T ss_pred             CCC
Confidence            996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.31  E-value=5.4e-12  Score=64.89  Aligned_cols=70  Identities=23%  Similarity=0.408  Sum_probs=60.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..++..++++|++ ++++...+..... ..++...+..++.+++.++.|||+.   +++|+|+
T Consensus        56 ~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl  125 (283)
T cd07830          56 EHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKG-KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDL  125 (283)
T ss_pred             CCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            3899999999999989999999999 7888888765431 2278888999999999999999999   9999986

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.30  E-value=3.8e-13  Score=75.35  Aligned_cols=69  Identities=26%  Similarity=0.395  Sum_probs=58.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .|||++.+.|+|..+...|++||||-+ +..+.+..+..  ++.+..+..++.+.+.|+.|||+.   +.||||+
T Consensus        84 ~HPntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDi  152 (948)
T KOG0577|consen   84 RHPNTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NRIHRDI  152 (948)
T ss_pred             cCCCcccccceeeccchHHHHHHHHhc-cHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhc
Confidence            599999999999999999999999964 55556554433  278888899999999999999999   9999996

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.30  E-value=4.4e-11  Score=66.23  Aligned_cols=72  Identities=19%  Similarity=0.157  Sum_probs=57.5

Q ss_pred             CCCceeeEeeEEeeCC--------eEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeE
Q 039179            1 QHQNIVKLYGFCLHKK--------CMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~--------~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~   71 (75)
                      +|+|++++...+....        .+++++||+.+|++...+.... ....++...+..++.|++.|+.|+|..   +++
T Consensus        89 ~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~Ii  165 (496)
T PTZ00283         89 DFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMI  165 (496)
T ss_pred             CCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEe
Confidence            4788998887665432        3679999999999999886421 122377888889999999999999999   999


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      ||||
T Consensus       166 HrDL  169 (496)
T PTZ00283        166 HRDI  169 (496)
T ss_pred             cCCC
Confidence            9996

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.30  E-value=1.3e-12  Score=68.91  Aligned_cols=71  Identities=27%  Similarity=0.367  Sum_probs=54.6

Q ss_pred             CCCceeeEeeEEeeCC-----eEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK-----CMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +||||+++.-+|....     ...+++||++. ++...++.- .....++.-.+..+..|+..|+.|||..   +|+|||
T Consensus        75 ~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRD  150 (364)
T KOG0658|consen   75 DHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRD  150 (364)
T ss_pred             CCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCC
Confidence            5999999988876532     23578999975 888887631 1112266677788999999999999998   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       151 I  151 (364)
T KOG0658|consen  151 I  151 (364)
T ss_pred             C
Confidence            7

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.30  E-value=2.3e-11  Score=62.61  Aligned_cols=70  Identities=17%  Similarity=0.324  Sum_probs=60.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+.++...++++|++. +++..++..... ..+++.....++.+++.++.|+|..   +++|+|+
T Consensus        56 ~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl  125 (283)
T cd07835          56 NHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDL  125 (283)
T ss_pred             CCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCC
Confidence            48999999999999999999999995 688888765331 1278888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.29  E-value=3.6e-11  Score=63.99  Aligned_cols=66  Identities=27%  Similarity=0.467  Sum_probs=53.0

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+||+++++.+....      ..++++|++.+ ++...+..  .   ++...+..++.|++.|+.|||..   +++|||
T Consensus        78 ~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~---~~~~~~~~~~~qi~~~L~~LH~~---~ivHrD  148 (359)
T cd07876          78 NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM--E---LDHERMSYLLYQMLCGIKHLHSA---GIIHRD  148 (359)
T ss_pred             CCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc--c---CCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence            5899999999886543      46899999975 45444432  1   67777888999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       149 l  149 (359)
T cd07876         149 L  149 (359)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PRK10345 hypothetical protein; Provisional

Probab=99.29  E-value=6.6e-11  Score=59.38  Aligned_cols=66  Identities=15%  Similarity=0.211  Sum_probs=50.5

Q ss_pred             CCCceeeEeeEEeeCC---eEE-EEEec--CCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHh-hHhhhCCCCCeEec
Q 039179            1 QHQNIVKLYGFCLHKK---CMF-AIYKY--MERGSLCCVLHKENEALELNWTNNVNIAKCVAHAL-SYLHHHCTPSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~---~~~-~~~e~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~~~~~i~hr   73 (75)
                      +||||+++++++.++.   ..+ +++||  +.+++|.+++... .   +.+.  .....+++.++ .|+|+.   +|+||
T Consensus        59 ~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~---~~e~--~~~~~~~L~~l~~yLh~~---~Ivhr  129 (210)
T PRK10345         59 DWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-R---YEED--VAQLRQLLKKLKRYLLDN---RIVTM  129 (210)
T ss_pred             CCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-c---ccHh--HHHHHHHHHHHHHHHHHC---CEeec
Confidence            3799999999998863   433 78999  5589999999652 1   4444  34566777677 899999   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      |+
T Consensus       130 Dl  131 (210)
T PRK10345        130 EL  131 (210)
T ss_pred             CC
Confidence            97

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.29  E-value=1.9e-12  Score=67.66  Aligned_cols=69  Identities=19%  Similarity=0.299  Sum_probs=58.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++.+..+|.....+.+++|||.. ++..-+...  +.+++...+..++.|++.|+.|.|.+   +++|||+
T Consensus        59 kH~NLVnLiEVFrrkrklhLVFE~~dh-TvL~eLe~~--p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDI  127 (396)
T KOG0593|consen   59 KHENLVNLIEVFRRKRKLHLVFEYCDH-TVLHELERY--PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDI  127 (396)
T ss_pred             ccchHHHHHHHHHhcceeEEEeeecch-HHHHHHHhc--cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccC
Confidence            589999999999999999999999976 444444332  22388889999999999999999999   9999996

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.28  E-value=1.1e-11  Score=67.21  Aligned_cols=71  Identities=25%  Similarity=0.408  Sum_probs=60.4

Q ss_pred             CCCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-----CCCCCeE
Q 039179            1 QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-----HCTPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-----~~~~~i~   71 (75)
                      +|+||..++++=..++    ++|++++|-+.|+|.+++....    +.....+.++..++.|+.+||.     +.+|.|.
T Consensus       263 RHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t----v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIA  338 (513)
T KOG2052|consen  263 RHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT----VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIA  338 (513)
T ss_pred             ccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc----CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhh
Confidence            5899999888755443    7899999999999999997632    8888889999999999999997     5577899


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      ||||
T Consensus       339 HRDl  342 (513)
T KOG2052|consen  339 HRDL  342 (513)
T ss_pred             cccc
Confidence            9996

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.28  E-value=1.3e-11  Score=62.58  Aligned_cols=72  Identities=21%  Similarity=0.259  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+......++++|+++++++..++.... ....+....+..++.+++.++.++|+.   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l  129 (256)
T cd08530          57 NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDL  129 (256)
T ss_pred             CCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCC
Confidence            48999999999998899999999999999998876521 112367788889999999999999999   9999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.28  E-value=9.2e-12  Score=69.57  Aligned_cols=68  Identities=25%  Similarity=0.333  Sum_probs=58.9

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCC-CHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERG-SLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+||++++++|.+++..++.+|--..| +|.+++.....   +.+.....++.|+..|+.++|++   +|+|||+
T Consensus       628 H~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~---m~E~eAk~IFkQV~agi~hlh~~---~ivhrdi  696 (772)
T KOG1152|consen  628 HENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPR---MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDI  696 (772)
T ss_pred             ccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCc---cchHHHHHHHHHHHhcccccccc---Cceeccc
Confidence            899999999999999999999976443 67777754333   88889999999999999999999   9999996

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.27  E-value=8.9e-11  Score=60.43  Aligned_cols=70  Identities=23%  Similarity=0.443  Sum_probs=58.2

Q ss_pred             CCCceeeEeeEEeeCCe-----EEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKC-----MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~-----~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.....     .++++|++.+ ++...+..... ..+++..+..++.+++.|+.+||+.   +++|+|+
T Consensus        59 ~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l  133 (287)
T cd07838          59 EHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDL  133 (287)
T ss_pred             CCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccC
Confidence            48999999999988766     8999999974 77777754322 1378889999999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.27  E-value=7.4e-11  Score=61.34  Aligned_cols=69  Identities=25%  Similarity=0.567  Sum_probs=55.9

Q ss_pred             CCCceeeEeeEEeeCC--------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLHKK--------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~--------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +|||++++.+.+...+        ..++++|++.+ ++...+.....  .++...+..++.|++.|+.|+|+.   +++|
T Consensus        69 ~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~i~H  142 (310)
T cd07865          69 KHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNV--KFTLSEIKKVMKMLLNGLYYIHRN---KILH  142 (310)
T ss_pred             CCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---Ceec
Confidence            4899999999887643        45899999964 67666654321  278888999999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      +|+
T Consensus       143 ~dl  145 (310)
T cd07865         143 RDM  145 (310)
T ss_pred             cCC
Confidence            986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.27  E-value=1.4e-10  Score=60.63  Aligned_cols=71  Identities=18%  Similarity=0.419  Sum_probs=54.9

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhcc------CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKE------NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +|+|++++.+.+..  +...++++|++.+ ++...+...      .....++...+..++.|++.|+.|+|+.   +++|
T Consensus        56 ~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH  131 (317)
T cd07867          56 KHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLH  131 (317)
T ss_pred             CCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEc
Confidence            58999999998854  4578899999864 666665421      1112267777888999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      ||+
T Consensus       132 ~Dl  134 (317)
T cd07867         132 RDL  134 (317)
T ss_pred             CCC
Confidence            996

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.25  E-value=1.5e-10  Score=60.39  Aligned_cols=69  Identities=28%  Similarity=0.442  Sum_probs=56.8

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...  +..++++|++.+ ++...+.....  .+....+..++.|++.++.|+|..   +++|||+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  134 (309)
T cd07845          64 RHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPT--PFSESQVKCLMLQLLRGLQYLHEN---FIIHRDL  134 (309)
T ss_pred             CCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            489999999998754  468999999964 67777654322  278888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.25  E-value=9.9e-11  Score=64.90  Aligned_cols=71  Identities=23%  Similarity=0.266  Sum_probs=54.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC--cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE--ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..+++++++. +++..++.....  ...........++.|++.|+.|||..   +|+||||
T Consensus       221 ~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDL  293 (501)
T PHA03210        221 NHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDI  293 (501)
T ss_pred             CCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            59999999999999999999999885 455555543211  01123445667899999999999999   9999997

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.25  E-value=3.8e-11  Score=67.05  Aligned_cols=68  Identities=22%  Similarity=0.352  Sum_probs=58.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+.++...|+++|.+.++.+...+....    ........++.+++.++.|||.+   +++|||+
T Consensus       374 ~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~----~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDL  441 (612)
T KOG0603|consen  374 DHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKP----EFCSEASQWAAELVSAVDYLHEQ---GVVHRDL  441 (612)
T ss_pred             CCCcceeecceecCCceeeeeehhccccHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHhc---CeeecCC
Confidence            58999999999999999999999999998877776533    22366677999999999999999   9999997

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.24  E-value=1.1e-10  Score=61.65  Aligned_cols=67  Identities=31%  Similarity=0.495  Sum_probs=55.8

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+...  ...++++|++. +++...+...    .+.+.....++.+++.|+.|||+.   +++|+|+
T Consensus        65 ~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl  133 (337)
T cd07852          65 DHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDL  133 (337)
T ss_pred             CCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            589999999988653  36899999997 5887777543    277778888999999999999999   9999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.24  E-value=4.2e-11  Score=61.53  Aligned_cols=69  Identities=23%  Similarity=0.434  Sum_probs=59.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|++.+ ++...+.....  .+....+..++.+++.++.++|..   +++|+|+
T Consensus        56 ~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl  124 (283)
T cd05118          56 NHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQR--GLPESLIKSYLYQLLQGLAFCHSH---GILHRDL  124 (283)
T ss_pred             cCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcc--cCCHHHHHHHHHHHHHHHHHHHHC---CeeecCc
Confidence            489999999999988999999999975 77777765321  278888899999999999999999   9999986

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.24  E-value=1.4e-10  Score=59.65  Aligned_cols=69  Identities=28%  Similarity=0.502  Sum_probs=58.6

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...  +..++++|++++ ++...+....  ..+.......++.+++.|+.++|..   +++|+|+
T Consensus        56 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl  126 (287)
T cd07840          56 RHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDI  126 (287)
T ss_pred             cCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccC
Confidence            489999999999887  789999999974 7777775432  2278888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=3.6e-12  Score=69.22  Aligned_cols=68  Identities=24%  Similarity=0.366  Sum_probs=60.8

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      -|.++++..+|.+-+.+|.+|||+.+|+|...++..+.   +.++.+..++..++.|+.+||++   +|++|||
T Consensus       409 ppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~k---gIiYRDL  476 (683)
T KOG0696|consen  409 PPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDL  476 (683)
T ss_pred             CchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcC---Ceeeeec
Confidence            36778888888888999999999999999988876544   88889999999999999999999   9999996

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.23  E-value=1.6e-10  Score=61.03  Aligned_cols=67  Identities=18%  Similarity=0.311  Sum_probs=55.0

Q ss_pred             CCCceeeEeeEEee-CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++.+++.. ....++++|++ ++++...+... .   ++......++.+++.++.++|..   +++|||+
T Consensus        67 ~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~---~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl  134 (328)
T cd07856          67 RHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTSR-P---LEKQFIQYFLYQILRGLKYVHSA---GVVHRDL  134 (328)
T ss_pred             CCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhcC-C---CCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            48999999998876 45788999998 46787776532 1   67777788899999999999999   9999986

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.23  E-value=7.1e-11  Score=61.33  Aligned_cols=69  Identities=25%  Similarity=0.380  Sum_probs=56.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      .|+|++++++.+..+...++++|++. +++.........  .++......++.+++.++.|+|. .   +++|||+
T Consensus        72 ~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl  141 (296)
T cd06618          72 DCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKH---GVIHRDV  141 (296)
T ss_pred             CCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCC
Confidence            48999999999999999999999985 466666544222  27788888899999999999996 5   8999986

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.23  E-value=1.1e-10  Score=61.89  Aligned_cols=67  Identities=19%  Similarity=0.339  Sum_probs=55.6

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+||+++.+.+..+.      ..++++|++ ++++...+.. ..   ++...+..++.|++.|+.|+|..   +++|||
T Consensus        72 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~---l~~~~~~~i~~qi~~al~~LH~~---gi~H~d  143 (343)
T cd07880          72 KHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-EK---LSEDRIQFLVYQMLKGLKYIHAA---GIIHRD  143 (343)
T ss_pred             CCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc-CC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence            5899999999887643      358999998 6688777653 22   78888999999999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       144 l  144 (343)
T cd07880         144 L  144 (343)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.23  E-value=5.1e-11  Score=65.16  Aligned_cols=70  Identities=21%  Similarity=0.244  Sum_probs=63.7

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .++|+.+--+|.+.+.+.+++..|.+|++.-.+...+++ .+++..+.+++.+|++|+.+||..   +|++||+
T Consensus       244 s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~-gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDL  313 (591)
T KOG0986|consen  244 SPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNP-GFDEQRARFYAAEIICGLEHLHRR---RIVYRDL  313 (591)
T ss_pred             cCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCC-CCchHHHHHHHHHHHhhHHHHHhc---ceeeccC
Confidence            568899988899999999999999999999998886653 399999999999999999999999   9999996

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.23  E-value=9.5e-12  Score=73.25  Aligned_cols=65  Identities=26%  Similarity=0.300  Sum_probs=58.6

Q ss_pred             eeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            5 IVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         5 i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |++++-+|.++..+|++|||++||++...+.+-..   +++..+.+++..+..++.-+|..   ++||||+
T Consensus       137 iv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~---~pE~~ArFY~aEiVlAldslH~m---gyVHRDi  201 (1317)
T KOG0612|consen  137 IVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDR---LPEDWARFYTAEIVLALDSLHSM---GYVHRDI  201 (1317)
T ss_pred             HHHHHHHhcCccceEEEEecccCchHHHHHhhcCC---ChHHHHHHHHHHHHHHHHHHHhc---cceeccC
Confidence            56677778889999999999999999999987553   89999999999999999999999   9999996

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.23  E-value=4.5e-11  Score=63.48  Aligned_cols=66  Identities=26%  Similarity=0.442  Sum_probs=53.1

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+||+++++.+....      ..++++|++.+ ++...+..  .   ++...+..++.|++.|+.|+|..   +++|||
T Consensus        74 ~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~---l~~~~~~~~~~qi~~aL~~LH~~---givHrD  144 (355)
T cd07874          74 NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM--E---LDHERMSYLLYQMLCGIKHLHSA---GIIHRD  144 (355)
T ss_pred             CCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHhh--c---CCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence            5899999999886532      46899999975 55555432  1   67778888999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       145 i  145 (355)
T cd07874         145 L  145 (355)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.22  E-value=3.2e-12  Score=72.10  Aligned_cols=69  Identities=29%  Similarity=0.448  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+.+++.+..+...|+.||||.+|++.+.-...+.   +.+.++....+....|+.|+|+.   +-+|||+
T Consensus        70 ~h~nivay~gsylr~dklwicMEycgggslQdiy~~Tgp---lselqiayvcRetl~gl~ylhs~---gk~hRdi  138 (829)
T KOG0576|consen   70 RHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLKYLHSQ---GKIHRDI  138 (829)
T ss_pred             CCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeeccc---chhHHHHHHHhhhhccchhhhcC---Ccccccc
Confidence            599999999999999999999999999999877655443   88888888999999999999999   8789986

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.22  E-value=4.5e-11  Score=63.20  Aligned_cols=67  Identities=19%  Similarity=0.323  Sum_probs=54.6

Q ss_pred             CCCceeeEeeEEeeC------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+||+++++++...      ...+++++++ ++++...+.. ..   ++...+..++.|++.|+.|+|..   +++|||
T Consensus        72 ~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-~~---l~~~~~~~i~~qi~~aL~~LH~~---~ivHrd  143 (343)
T cd07878          72 KHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC-QK---LSDEHVQFLIYQLLRGLKYIHSA---GIIHRD  143 (343)
T ss_pred             CCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc-CC---CCHHHHHHHHHHHHHHHHHHHHC---Ceeccc
Confidence            489999999887543      3467888887 6788777643 22   88888999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       144 i  144 (343)
T cd07878         144 L  144 (343)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.22  E-value=1.1e-10  Score=62.31  Aligned_cols=66  Identities=24%  Similarity=0.430  Sum_probs=53.2

Q ss_pred             CCCceeeEeeEEeeC------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++++.+...      ...++++|++.+ ++...+..  .   +....+..++.|++.|+.|+|..   +++|||
T Consensus        81 ~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~---~~~~~~~~~~~qi~~aL~~LH~~---~ivH~D  151 (364)
T cd07875          81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM--E---LDHERMSYLLYQMLCGIKHLHSA---GIIHRD  151 (364)
T ss_pred             CCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHHh--c---CCHHHHHHHHHHHHHHHHHHhhC---CeecCC
Confidence            589999999887543      357899999975 55555532  1   67778888999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       152 l  152 (364)
T cd07875         152 L  152 (364)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.21  E-value=9.2e-11  Score=65.51  Aligned_cols=67  Identities=21%  Similarity=0.360  Sum_probs=60.4

Q ss_pred             ceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            4 NIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         4 ~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+++++++|...+..++++|.+. -+|+.+++..... +++...+..++.|++.++.+||..   +|||+||
T Consensus       249 n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~-Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDL  315 (586)
T KOG0667|consen  249 NIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFR-GLSLPLVRKFAQQILTALLFLHEL---GIIHCDL  315 (586)
T ss_pred             eEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccC
Confidence            79999999999999999999985 5899999875543 388999999999999999999999   9999997

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.20  E-value=5.7e-11  Score=62.67  Aligned_cols=68  Identities=22%  Similarity=0.384  Sum_probs=56.0

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..    ....++++||+. +++...+.....   ++...+..++.+++.|+.|||..   +++|||+
T Consensus        62 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dl  133 (334)
T cd07855          62 KHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQP---LTEEHIRYFLYQLLRGLKYIHSA---NVIHRDL  133 (334)
T ss_pred             CCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCCC---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            48999998887753    346899999995 678887754332   78888999999999999999999   9999986

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.19  E-value=4.9e-10  Score=57.47  Aligned_cols=72  Identities=28%  Similarity=0.473  Sum_probs=56.3

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccC---CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeE
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKEN---EALELNWTNNVNIAKCVAHALSYLHHHCTPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~   71 (75)
                      +|||++++++.+....      ..+++++++.+|++..++....   ....++......++.+++.|+.|+|+.   +++
T Consensus        59 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~  135 (273)
T cd05074          59 DHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFI  135 (273)
T ss_pred             CCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEe
Confidence            5899999999886532      2467889999999987764311   112267778889999999999999999   999


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      |||+
T Consensus       136 H~di  139 (273)
T cd05074         136 HRDL  139 (273)
T ss_pred             eccc
Confidence            9996

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.19  E-value=3.8e-11  Score=61.68  Aligned_cols=69  Identities=28%  Similarity=0.405  Sum_probs=60.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+......++++|++. +++...+.....  .++......++.+++.++.++|+.   +++|+|+
T Consensus        56 ~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l  124 (282)
T cd07829          56 KHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPG--PLSPNLIKSIMYQLLRGLAYCHSH---RILHRDL  124 (282)
T ss_pred             CCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            48899999999998889999999997 589888876421  288889999999999999999999   9999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.19  E-value=2e-10  Score=63.23  Aligned_cols=71  Identities=27%  Similarity=0.426  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEeeC-CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||-|+++++.+.-+ ..++-++|||++.+|.-+++.+.-   +.+.+...++.|++.++.||... +|+|||-||
T Consensus       525 DHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhkl---mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDL  596 (775)
T KOG1151|consen  525 DHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKL---MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDL  596 (775)
T ss_pred             CcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhh---hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeecc
Confidence            589999999998754 578899999999999999876543   78889999999999999999875 778999886

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.19  E-value=1.4e-10  Score=61.35  Aligned_cols=68  Identities=16%  Similarity=0.366  Sum_probs=56.4

Q ss_pred             CCCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+...     ...++++|++. +++...+.....   ++...+..++.+++.++.|||..   +++|||+
T Consensus        62 ~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl  134 (337)
T cd07858          62 DHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQT---LSDDHCQYFLYQLLRGLKYIHSA---NVLHRDL  134 (337)
T ss_pred             CCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence            489999999877643     24799999996 678777765332   88889999999999999999999   9999986

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.19  E-value=8.5e-11  Score=67.57  Aligned_cols=71  Identities=18%  Similarity=0.348  Sum_probs=55.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCH-HhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNW-TNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.-.++++.|+..|.|. .+|.+++........... -.......|++.|+.+||+.   +|+||||
T Consensus       561 ~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDL  632 (903)
T KOG1027|consen  561 EHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDL  632 (903)
T ss_pred             CCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccC
Confidence            59999999999999999999999995 588888876311100111 23466788999999999998   9999997

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.19  E-value=1.4e-10  Score=58.06  Aligned_cols=69  Identities=32%  Similarity=0.531  Sum_probs=61.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+..+...++++|++.++++..++.....   ++......++.+++.++.++|..   +++|+|+
T Consensus        45 ~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i  113 (244)
T smart00220       45 KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGR---LSEDEARFYARQILSALEYLHSN---GIIHRDL  113 (244)
T ss_pred             CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHc---CeecCCc
Confidence            488999999999988899999999999999998865332   67788889999999999999999   9999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.18  E-value=3.3e-10  Score=59.80  Aligned_cols=68  Identities=21%  Similarity=0.332  Sum_probs=54.6

Q ss_pred             CCCceeeEeeEEeeC----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+...    ...+++++++. +++...+.....   ++......++.|++.|+.|+|..   +++|||+
T Consensus        60 ~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---givH~dl  131 (332)
T cd07857          60 GHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQP---LTDAHFQSFIYQILCGLKYIHSA---NVLHRDL  131 (332)
T ss_pred             CCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            489999998875432    35678888875 678887755332   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.18  E-value=1.1e-11  Score=65.68  Aligned_cols=69  Identities=23%  Similarity=0.352  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||++..+--+|.....++.+|||..+|.+.-.+.....   +.+.....+...|..++.|||++   +|++||+
T Consensus       226 ~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~---FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDl  294 (516)
T KOG0690|consen  226 RHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERV---FSEDRTRFYGAEIVSALGYLHSR---NIVYRDL  294 (516)
T ss_pred             cCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhc---ccchhhhhhhHHHHHHhhhhhhC---Ceeeeec
Confidence            488888888888889999999999999999888765443   88889999999999999999999   9999996

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.17  E-value=6.9e-11  Score=62.11  Aligned_cols=68  Identities=24%  Similarity=0.343  Sum_probs=57.4

Q ss_pred             CCCceeeEeeEEeeCC-----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK-----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+....     ..++++|++. +++...+....   .++...+..++.+++.++.+||+.   +++|+|+
T Consensus        57 ~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dl  129 (330)
T cd07834          57 RHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDL  129 (330)
T ss_pred             CCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            4889999999887764     7899999997 47877776533   288888899999999999999999   9999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.17  E-value=3.8e-11  Score=63.27  Aligned_cols=71  Identities=23%  Similarity=0.403  Sum_probs=58.7

Q ss_pred             CCCceeeEeeEEee-CCeEEEEEecCCCCCHHHHhhccCC--cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENE--ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++..++.+ +..+++++||.+. +|.+.++-+..  ...++...+..+..|++.|+.|||++   .++||||
T Consensus        85 ~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDL  158 (438)
T KOG0666|consen   85 KHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDL  158 (438)
T ss_pred             cCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccC
Confidence            58999999998887 7899999999864 77777764322  12377778888999999999999999   8999997

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.15  E-value=1.4e-12  Score=70.22  Aligned_cols=69  Identities=32%  Similarity=0.421  Sum_probs=60.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +++||.++++++..+..+|++|||+.+|++...++....   +.+..+..++..+..|+.|+|..   +.+|||+
T Consensus        69 ~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~---~~E~~i~~ilre~l~~l~ylH~~---~kiHrDI  137 (467)
T KOG0201|consen   69 DSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNI---LDEFEIAVILREVLKGLDYLHSE---KKIHRDI  137 (467)
T ss_pred             CcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCC---CccceeeeehHHHHHHhhhhhhc---ceecccc
Confidence            368899999999999999999999999999998876332   46667777889999999999999   9999996

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.14  E-value=7.2e-10  Score=58.87  Aligned_cols=67  Identities=19%  Similarity=0.331  Sum_probs=53.6

Q ss_pred             CCCceeeEeeEEeeC------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+||+++.+.+...      ...+++++++ ++++...+... .   +....+..++.|++.|+.|+|..   +++|||
T Consensus        74 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-~---l~~~~~~~i~~qi~~aL~~LH~~---~ivH~d  145 (345)
T cd07877          74 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ-K---LTDDHVQFLIYQILRGLKYIHSA---DIIHRD  145 (345)
T ss_pred             CCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC-C---CCHHHHHHHHHHHHHHHHHHHHC---CeeecC
Confidence            589999999988643      2356777766 67887776532 2   78888889999999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       146 l  146 (345)
T cd07877         146 L  146 (345)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.13  E-value=1.8e-10  Score=60.96  Aligned_cols=68  Identities=19%  Similarity=0.400  Sum_probs=58.2

Q ss_pred             CCCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+.+.+.+..+     ..+|+++|+| ..+|.+.++....   +.......+..|++.|+.|+|+.   +++||||
T Consensus        79 ~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~~~---L~d~H~q~f~YQiLrgLKyiHSA---nViHRDL  151 (359)
T KOG0660|consen   79 RHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQD---LTDDHAQYFLYQILRGLKYIHSA---NVIHRDL  151 (359)
T ss_pred             cCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHcCcc---ccHHHHHHHHHHHHHhcchhhcc---ccccccc
Confidence            599999999988762     4789999999 4588888876443   88888899999999999999999   9999997

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.13  E-value=7.4e-10  Score=58.92  Aligned_cols=66  Identities=24%  Similarity=0.437  Sum_probs=53.7

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++++++....      ..++++|++. +++...+...     +....+..++.|++.|+.++|..   +++|||
T Consensus        73 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~d  143 (353)
T cd07850          73 NHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSA---GIIHRD  143 (353)
T ss_pred             CCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCC
Confidence            5899999999886442      4689999996 4776666432     67777888999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       144 l  144 (353)
T cd07850         144 L  144 (353)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.13  E-value=5e-10  Score=62.76  Aligned_cols=70  Identities=23%  Similarity=0.293  Sum_probs=58.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .||.|+.+-.-|.+++.++++||.+.+.-|+..+.....  .+++....+++.||+.++.|||..   +|+|+||
T Consensus       621 ~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkg--RL~er~TkFlvtQIL~ALr~LH~k---nIvHCDL  690 (888)
T KOG4236|consen  621 HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKG--RLPERITKFLVTQILVALRYLHFK---NIVHCDL  690 (888)
T ss_pred             CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcc--cchHHHHHHHHHHHHHHHHHhhhc---ceeeccC
Confidence            489999999999999999999999965544444443222  288888889999999999999999   9999996

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.13  E-value=8.2e-10  Score=57.09  Aligned_cols=72  Identities=26%  Similarity=0.245  Sum_probs=54.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhc--cCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK--ENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|++.. ++......  ......++......++.+++.|+.|+|...  +++|||+
T Consensus        61 ~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dl  134 (288)
T cd06616          61 DCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDV  134 (288)
T ss_pred             CCCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCC
Confidence            389999999999988899999999864 44443221  011122788888999999999999998632  7999996

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.12  E-value=2.5e-09  Score=52.38  Aligned_cols=69  Identities=35%  Similarity=0.563  Sum_probs=60.4

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |++++++.+.+......++++|++.++++..++.....  .++......++.+++.++.++|..   +++|+|+
T Consensus        50 ~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl  118 (215)
T cd00180          50 HPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEG--KLSEDEILRILLQILEGLEYLHSN---GIIHRDL  118 (215)
T ss_pred             CCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCC
Confidence            67899999999988899999999999999999875421  277888899999999999999999   9999986

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.11  E-value=2.7e-10  Score=60.38  Aligned_cols=67  Identities=27%  Similarity=0.454  Sum_probs=54.0

Q ss_pred             CCCceeeEeeEEeeC--------------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCC
Q 039179            1 QHQNIVKLYGFCLHK--------------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHC   66 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--------------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~   66 (75)
                      +|+|++++++.+...              ...++++|++. +++...+.. ..   ++...+..++.|++.|+.|+|.. 
T Consensus        60 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~---l~~~~~~~~~~qi~~aL~~LH~~-  133 (342)
T cd07854          60 DHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ-GP---LSEEHARLFMYQLLRGLKYIHSA-  133 (342)
T ss_pred             CCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHc-CC---CCHHHHHHHHHHHHHHHHHHHhC-
Confidence            488999988766543              35789999997 577777643 22   78888899999999999999999 


Q ss_pred             CCCeEeccC
Q 039179           67 TPSIIYRDI   75 (75)
Q Consensus        67 ~~~i~hrdl   75 (75)
                        +++|||+
T Consensus       134 --givH~di  140 (342)
T cd07854         134 --NVLHRDL  140 (342)
T ss_pred             --CcccCCC
Confidence              9999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.11  E-value=5.8e-10  Score=58.94  Aligned_cols=67  Identities=18%  Similarity=0.356  Sum_probs=54.1

Q ss_pred             CCCceeeEeeEEeeCC-----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK-----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++.+.+....     ..++++|++.+ ++...+... .   +....+..++.|++.|+.+||+.   +++|||+
T Consensus        61 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~-~---l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dl  132 (336)
T cd07849          61 KHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQ-H---LSNDHIQYFLYQILRGLKYIHSA---NVLHRDL  132 (336)
T ss_pred             CCCCcCchhheeecccccccceEEEEehhccc-CHHHHHhcC-C---CCHHHHHHHHHHHHHHHHHHHhC---CeeccCC
Confidence            4899999988765443     47899999964 676666432 2   78888899999999999999999   9999996

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.11  E-value=5.2e-11  Score=61.79  Aligned_cols=67  Identities=18%  Similarity=0.374  Sum_probs=54.2

Q ss_pred             CCceeeEee-EEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYG-FCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~-~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |.||+.-++ .|.+.+....++|+++.|+|..-+...+    +.+.....++.|++.++.|+|+.   .++||||
T Consensus        80 H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdl  147 (378)
T KOG1345|consen   80 HQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDL  147 (378)
T ss_pred             chhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhcc---chhhccc
Confidence            556665544 3455667778999999999988775533    88888889999999999999999   9999996

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.10  E-value=5e-10  Score=58.30  Aligned_cols=69  Identities=23%  Similarity=0.455  Sum_probs=53.8

Q ss_pred             CCCceeeEeeEEeeC--------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLHK--------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +|+|++++.+.+...        ...++++||+.. ++...+....  ..++...+..++.+++.++.|+|..   +++|
T Consensus        65 ~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H  138 (311)
T cd07866          65 KHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILH  138 (311)
T ss_pred             CCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence            589999998877543        246899999875 5555544322  2288889999999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      +|+
T Consensus       139 ~dl  141 (311)
T cd07866         139 RDI  141 (311)
T ss_pred             CCC
Confidence            996

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PTZ00284 protein kinase; Provisional

Probab=99.09  E-value=2.4e-09  Score=58.95  Aligned_cols=67  Identities=15%  Similarity=0.186  Sum_probs=53.6

Q ss_pred             CCceeeEeeEEeeC-CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHK-KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      |.+++++.+++..+ ...+++++++ ++++..++...+.   +....+..++.|++.|+.|||. .   +|+||||
T Consensus       190 ~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDl  258 (467)
T PTZ00284        190 RFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGP---FSHRHLAQIIFQTGVALDYFHTEL---HLMHTDL  258 (467)
T ss_pred             CcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhcC---CeecCCC
Confidence            45688888887654 4678888887 6678777765433   8888889999999999999997 6   8999997

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.08  E-value=2.1e-09  Score=53.49  Aligned_cols=70  Identities=33%  Similarity=0.503  Sum_probs=60.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+......++++|+++++++..++......  +.......++.+++.++.++|..   +++|+|+
T Consensus        55 ~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di  124 (225)
T smart00221       55 KHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHSL---GIVHRDL  124 (225)
T ss_pred             CCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            4789999999998888999999999999999998753321  56777888899999999999999   9999986

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.05  E-value=4e-10  Score=59.76  Aligned_cols=67  Identities=19%  Similarity=0.344  Sum_probs=55.1

Q ss_pred             CCCceeeEeeEEeeCCe------EEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKKC------MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~------~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++.+.+..++.      .++++|++ ++++...+...    .++...+..++.+++.++.++|+.   +++|+|
T Consensus        72 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~d  143 (343)
T cd07851          72 DHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRD  143 (343)
T ss_pred             cCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCC
Confidence            47888888877765543      88999998 56888877542    288888999999999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       144 l  144 (343)
T cd07851         144 L  144 (343)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.03  E-value=1.6e-10  Score=59.13  Aligned_cols=74  Identities=22%  Similarity=0.305  Sum_probs=59.5

Q ss_pred             CCCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|||++++.+....+     ...|++++|...|++.+.+.... .+..+++.+++.++.+++.|+.++|+. .|+.+|||
T Consensus        76 ~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~D  154 (302)
T KOG2345|consen   76 NSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRD  154 (302)
T ss_pred             CCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccC
Confidence            478888887766543     35899999999999999987632 222378999999999999999999997 44599999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       155 i  155 (302)
T KOG2345|consen  155 I  155 (302)
T ss_pred             C
Confidence            6

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.01  E-value=3.3e-11  Score=66.76  Aligned_cols=68  Identities=28%  Similarity=0.468  Sum_probs=62.2

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ++.|++++..|.++..+|+.||-|-+|.++..++..+.   +......+++..+..++.|||..   +||+|||
T Consensus       479 s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~---Fdd~tarF~~acv~EAfeYLH~k---~iIYRDL  546 (732)
T KOG0614|consen  479 SDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGS---FDDYTARFYVACVLEAFEYLHRK---GIIYRDL  546 (732)
T ss_pred             chHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCC---cccchhhhhHHHHHHHHHHHHhc---CceeccC
Confidence            57889999999999999999999999999999987665   88888899999999999999999   9999997

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.00  E-value=2.2e-09  Score=59.29  Aligned_cols=69  Identities=23%  Similarity=0.382  Sum_probs=57.4

Q ss_pred             CceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            3 QNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         3 ~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .+|+++++.|.-    +..+++++|++ +..|..++....... ++...+..++.|++.|+.|||..|  +|||-||
T Consensus       142 ~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrG-lpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDl  214 (590)
T KOG1290|consen  142 KCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRG-LPLSCVKEICRQVLTGLDYLHREC--GIIHTDL  214 (590)
T ss_pred             ceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCC-CcHHHHHHHHHHHHHHHHHHHHhc--CccccCC
Confidence            368999998864    34789999998 567778887754433 889999999999999999999988  9999886

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.95  E-value=5.2e-10  Score=58.91  Aligned_cols=66  Identities=27%  Similarity=0.437  Sum_probs=54.0

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|+++++.++....      ..++++|+|. +++...+.-.     +....+..++.|+++|+.++|+.   +|+|||
T Consensus        73 ~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~e-----lDH~tis~i~yq~~~~ik~lhs~---~IihRd  143 (369)
T KOG0665|consen   73 NHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILME-----LDHETISYILYQMLCGIKHLHSA---GIIHRD  143 (369)
T ss_pred             cccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHhc---ceeecc
Confidence            4899999999987643      5789999996 4666666521     66777888999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       144 L  144 (369)
T KOG0665|consen  144 L  144 (369)
T ss_pred             c
Confidence            6

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.93  E-value=7.7e-10  Score=64.15  Aligned_cols=67  Identities=10%  Similarity=0.154  Sum_probs=51.7

Q ss_pred             CceeeEeeEEe-------eCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            3 QNIVKLYGFCL-------HKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         3 ~~i~~~~~~~~-------~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .||.++++.+.       ....++.++|++ .++|..++.....  .++...+..++.|++.|+.|+|.+   +|+||||
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---gIvHrDl  106 (793)
T PLN00181         33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDR--SVDAFECFHVFRQIVEIVNAAHSQ---GIVVHNV  106 (793)
T ss_pred             HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccc--cccHHHHHHHHHHHHHHHHHHHhC---CeeeccC
Confidence            46666777662       223566778876 5699999864322  288889999999999999999999   9999997

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.93  E-value=6.1e-09  Score=55.31  Aligned_cols=66  Identities=23%  Similarity=0.376  Sum_probs=52.2

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+|++++.+++....      ..++++|++.. ++.....  .   .++...+..++.+++.|+.|+|..   +++|||
T Consensus        72 ~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~---~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~d  142 (342)
T cd07879          72 QHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMG--H---PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRD  142 (342)
T ss_pred             CCCCccchhheecccccCCCCceEEEEeccccc-CHHHHHc--C---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCC
Confidence            4899999999886542      46899999864 5554432  1   177888888999999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       143 l  143 (342)
T cd07879         143 L  143 (342)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.90  E-value=3.1e-08  Score=51.70  Aligned_cols=68  Identities=26%  Similarity=0.319  Sum_probs=48.4

Q ss_pred             CCCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++++++....    ..+++++.... ++...+.....   .+...+..++.|++.|+.|+|+.   +++||||
T Consensus        81 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDi  152 (294)
T PHA02882         81 DHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKC---KNKKLIKNIMKDMLTTLEYIHEH---GISHGDI  152 (294)
T ss_pred             CCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhcc---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            4788899888765543    23566666543 44444433221   56677788999999999999999   9999996

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.86  E-value=2.9e-08  Score=54.15  Aligned_cols=72  Identities=26%  Similarity=0.391  Sum_probs=57.9

Q ss_pred             CCCceeeEeeEEeeC-CeEEEEEecCCCCCHHHHhhc-----cCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK-KCMFAIYKYMERGSLCCVLHK-----ENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      .|||+.+..+++..+ ...+..+.++..|++..++..     ......+.-.+...++.|++.|+.++|..   +++|.|
T Consensus       345 sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkD  421 (563)
T KOG1024|consen  345 SHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKD  421 (563)
T ss_pred             cCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccch
Confidence            489999999988765 466788889999999999983     22222355567788899999999999999   999998


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       422 i  422 (563)
T KOG1024|consen  422 I  422 (563)
T ss_pred             h
Confidence            6

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.85  E-value=1.1e-08  Score=55.36  Aligned_cols=65  Identities=25%  Similarity=0.346  Sum_probs=58.1

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +.|++++.+++..+++..+++||++......+...      +....+..++..+..+|.++|.+   +|+|||+
T Consensus        94 ~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDi  158 (418)
T KOG1167|consen   94 SDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDI  158 (418)
T ss_pred             chhhhcchhhhccCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCC
Confidence            46889999999999999999999999888888754      66778888999999999999999   9999996

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.84  E-value=3.2e-09  Score=52.67  Aligned_cols=69  Identities=20%  Similarity=0.348  Sum_probs=57.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|.||++++++..++..+-+++|+|.. .+..+.-+...  .+.......+..|+..|+.+.|+.   .+.|||+
T Consensus        59 khknivrl~dvlhsdkkltlvfe~cdq-dlkkyfdslng--~~d~~~~rsfmlqllrgl~fchsh---nvlhrdl  127 (292)
T KOG0662|consen   59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDL  127 (292)
T ss_pred             hhcceeehhhhhccCceeEEeHHHhhH-HHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccC
Confidence            489999999999999999999999964 56666554322  278888888999999999999999   9999986

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.81  E-value=4.1e-08  Score=48.60  Aligned_cols=52  Identities=10%  Similarity=0.112  Sum_probs=39.8

Q ss_pred             EEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179           18 MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus        18 ~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      .+++||+++++++.........   ++......++.+++.++.++|. .   +++|||+
T Consensus        92 ~~lVmE~~~g~~~~~~~l~~~~---~~~~~~~~i~~~l~~~l~~lH~~~---givHrDl  144 (190)
T cd05145          92 NVLVMEFIGDDGSPAPRLKDVP---LEEEEAEELYEQVVEQMRRLYQEA---GLVHGDL  144 (190)
T ss_pred             CEEEEEEecCCCchhhhhhhcc---CCHHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence            3799999988754333222122   6667788899999999999999 8   9999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.79  E-value=2.4e-08  Score=49.54  Aligned_cols=52  Identities=10%  Similarity=0.165  Sum_probs=40.8

Q ss_pred             EEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHh-hhCCCCCeEeccC
Q 039179           18 MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYL-HHHCTPSIIYRDI   75 (75)
Q Consensus        18 ~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~~i~hrdl   75 (75)
                      .+++|||++++++........   .++......++.+++.++.++ |..   +++|||+
T Consensus        92 ~~iVmE~i~g~~l~~~~~~~~---~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl  144 (190)
T cd05147          92 HVLVMEFIGDDGWAAPRLKDA---PLSESKARELYLQVIQIMRILYQDC---RLVHADL  144 (190)
T ss_pred             CEEEEEEeCCCCCcchhhhcC---CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            379999998876654432222   277788889999999999998 688   9999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.79  E-value=2.7e-08  Score=55.64  Aligned_cols=58  Identities=21%  Similarity=0.245  Sum_probs=44.7

Q ss_pred             CCeEEEEEecCCCCCHHHHhhccCCc---------------------ccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEec
Q 039179           15 KKCMFAIYKYMERGSLCCVLHKENEA---------------------LELNWTNNVNIAKCVAHALSYLHHHCTPSIIYR   73 (75)
Q Consensus        15 ~~~~~~~~e~~~~~~l~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hr   73 (75)
                      .+..++++||+.++++.+.+......                     ..+.+..+..++.+++.++.|+|..   +++||
T Consensus       257 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHr  333 (507)
T PLN03224        257 KGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHR  333 (507)
T ss_pred             CCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHC---CeecC
Confidence            35689999999999999888642110                     0123456677889999999999999   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      |+
T Consensus       334 DL  335 (507)
T PLN03224        334 DI  335 (507)
T ss_pred             CC
Confidence            96

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.78  E-value=8.6e-09  Score=52.03  Aligned_cols=71  Identities=27%  Similarity=0.310  Sum_probs=56.3

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhc-cCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK-ENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      -|+++.++|.....+..|+.||.|.. ++..+.++ .......++..+..++..+..++.|||++.  .++|||+
T Consensus       104 CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDv  175 (282)
T KOG0984|consen  104 CPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDV  175 (282)
T ss_pred             CCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccC
Confidence            37789999999999999999999864 56555543 122223788888899999999999999865  7899995

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.77  E-value=6.1e-09  Score=53.33  Aligned_cols=65  Identities=22%  Similarity=0.260  Sum_probs=53.3

Q ss_pred             CCceeeEeeEEeeCC--eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKK--CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~--~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||+++.+...++.  ...+++|+..+.+.......      +..-.+..+..+++.++.|.|+.   +|.|||+
T Consensus        92 g~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t------l~d~dIryY~~elLkALdyCHS~---GImHRDV  158 (338)
T KOG0668|consen   92 GPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPT------LTDYDIRYYIYELLKALDYCHSM---GIMHRDV  158 (338)
T ss_pred             CCCeeehhhhhcCccccCchhHhhhhccccHHHHhhh------hchhhHHHHHHHHHHHHhHHHhc---CcccccC
Confidence            799999999988764  45688999887776555432      56667888999999999999999   9999995

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.77  E-value=7.7e-09  Score=54.18  Aligned_cols=64  Identities=30%  Similarity=0.513  Sum_probs=56.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHH   65 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~   65 (75)
                      .||||....+.|.++....++..||+.|+++..+..... ..+...+...++.+++.|+.|||+.
T Consensus       245 shpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsl  308 (448)
T KOG0195|consen  245 SHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSL  308 (448)
T ss_pred             cCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhc
Confidence            489999999999999999999999999999999976432 3367778899999999999999985

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.76  E-value=1.7e-07  Score=52.86  Aligned_cols=68  Identities=19%  Similarity=0.245  Sum_probs=56.1

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |.+|++++++-..++.+|++||+ ..-+|.+.++.....  .+-..+..+..|++.++.+.|..   +|||.||
T Consensus       419 ~~~IIqL~DYEv~d~~lYmvmE~-Gd~DL~kiL~k~~~~--~~~~~lk~ywkqML~aV~~IH~~---gIVHSDL  486 (677)
T KOG0596|consen  419 HDKIIQLYDYEVTDGYLYMVMEC-GDIDLNKILKKKKSI--DPDWFLKFYWKQMLLAVKTIHQH---GIVHSDL  486 (677)
T ss_pred             CceEEEEeeeeccCceEEEEeec-ccccHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHHHh---ceeecCC
Confidence            67899999999999999999996 355888888764432  33236778889999999999999   9999996

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.74  E-value=8.8e-08  Score=53.88  Aligned_cols=60  Identities=17%  Similarity=0.232  Sum_probs=47.6

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+++.........+...++++||++++++...+.           ....++.+++.++.++|..   +++|||+
T Consensus       395 ~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDl  454 (535)
T PRK09605        395 RAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDL  454 (535)
T ss_pred             ccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCC
Confidence            4566665555666667889999999999987764           2355778899999999999   9999996

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.74  E-value=7e-08  Score=48.17  Aligned_cols=63  Identities=13%  Similarity=0.279  Sum_probs=48.3

Q ss_pred             CceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            3 QNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         3 ~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +++......+......++++|+++++++...+...      .. ....++.+++.++.++|..   +++|+|+
T Consensus        59 ~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl  121 (211)
T PRK14879         59 AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSA---GIIHGDL  121 (211)
T ss_pred             CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            44444444555667788999999999998887532      11 5677888999999999999   9999996

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.74  E-value=7.4e-08  Score=53.57  Aligned_cols=69  Identities=28%  Similarity=0.480  Sum_probs=58.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCe-Eecc
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSI-IYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i-~hrd   74 (75)
                      .|.|+.+++|.+.++...+.++++|..|++.+.+.....  .+.+.....+..+++.|+.|+|..   ++ .|+.
T Consensus         5 ~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~--~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~   74 (484)
T KOG1023|consen    5 DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI--KLDYFFILSFIRDISKGLAYLHNS---PIGYHGA   74 (484)
T ss_pred             chhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc--CccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence            488999999999999999999999999999999986322  277778888899999999999986   44 5653

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.68  E-value=1.1e-07  Score=51.45  Aligned_cols=58  Identities=17%  Similarity=0.119  Sum_probs=42.0

Q ss_pred             CCCceee-EeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVK-LYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~-~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++. +.+    .+..+++|||++++++... ..      ..   ...++.+++.++.++|..   +++||||
T Consensus        79 ~h~~iv~~l~~----~~~~~LVmE~~~G~~L~~~-~~------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL  137 (365)
T PRK09188         79 RGIGVVPQLLA----TGKDGLVRGWTEGVPLHLA-RP------HG---DPAWFRSAHRALRDLHRA---GITHNDL  137 (365)
T ss_pred             cCCCCCcEEEE----cCCcEEEEEccCCCCHHHh-Cc------cc---hHHHHHHHHHHHHHHHHC---CCeeCCC
Confidence            3677774 443    2457999999999988622 11      11   134677899999999999   9999997

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.68  E-value=1.5e-07  Score=53.36  Aligned_cols=59  Identities=19%  Similarity=0.296  Sum_probs=43.8

Q ss_pred             eCCeEEEEEecCCCCCHHHHhhccCCcc-----------------cCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           14 HKKCMFAIYKYMERGSLCCVLHKENEAL-----------------ELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        14 ~~~~~~~~~e~~~~~~l~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .+...++++||+.++++..++.......                 ......+..++.|++.|+.|+|+.   +|+||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL  281 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV  281 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence            3457899999999999998886432110                 001223456788999999999999   9999997

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.67  E-value=8.9e-09  Score=55.02  Aligned_cols=73  Identities=30%  Similarity=0.394  Sum_probs=55.2

Q ss_pred             CCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |.||++++..+.+.     ....++.||+..|++.+++++.. ....+.......++-|+..|+.|||+. .|+++|+++
T Consensus       126 HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppiihgnl  204 (458)
T KOG1266|consen  126 HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPIIHGNL  204 (458)
T ss_pred             HHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCccccCCc
Confidence            56777777666543     35788999999999999998732 233355566678899999999999995 677888764

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.66  E-value=3.1e-07  Score=48.82  Aligned_cols=68  Identities=22%  Similarity=0.213  Sum_probs=54.0

Q ss_pred             CceeeEeeEE-eeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            3 QNIVKLYGFC-LHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         3 ~~i~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .++.++.+.. ..+...+++|+.. +.+|.+...... ...++......++.|+..++.++|+.   +++|||+
T Consensus        80 ~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDi  148 (322)
T KOG1164|consen   80 SHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDI  148 (322)
T ss_pred             CCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCc
Confidence            3666777777 4666788999877 668888765433 23388899999999999999999999   9999996

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=98.66  E-value=2e-07  Score=50.37  Aligned_cols=66  Identities=11%  Similarity=0.176  Sum_probs=55.3

Q ss_pred             eeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            5 IVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         5 i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ++++.++|.-.+.+++++|.+ +-++.+++++.... +++...+..++.|++.++.+||+.   .++|-||
T Consensus       153 cv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~-~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDL  218 (415)
T KOG0671|consen  153 CVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYI-PFPIDHIRHMGYQLLESVAFLHDL---KLTHTDL  218 (415)
T ss_pred             EEeeehhhhccCceEEEEecc-ChhHHHHhccCCcc-ccchHHHHHHHHHHHHHHHHHHhc---ceeecCC
Confidence            466777787788999999988 44888898875443 388889999999999999999999   9999886

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.60  E-value=1.4e-07  Score=51.75  Aligned_cols=67  Identities=22%  Similarity=0.357  Sum_probs=49.5

Q ss_pred             CCCceeeEeeEEeeC---------------------------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHH
Q 039179            1 QHQNIVKLYGFCLHK---------------------------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAK   53 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~---------------------------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   53 (75)
                      .||||++..++|.+.                           ..+|++|.-.+ .++..++....    ........++.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~----~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH----RSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC----CchHHHHHHHH
Confidence            599999999888652                           24566666543 36666665422    45556677889


Q ss_pred             HHHHHhhHhhhCCCCCeEeccC
Q 039179           54 CVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        54 ~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+.+++.|||..   ++.|||+
T Consensus       349 QlLEav~hL~~h---gvAhRDl  367 (598)
T KOG4158|consen  349 QLLEAVTHLHKH---GVAHRDL  367 (598)
T ss_pred             HHHHHHHHHHHc---cchhhcc
Confidence            999999999999   9999996

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.59  E-value=8.7e-08  Score=57.70  Aligned_cols=55  Identities=18%  Similarity=0.357  Sum_probs=44.3

Q ss_pred             CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           16 KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        16 ~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .-+|+-||||+..++...+......  -.......++.+|+.|+.|+|++   ++|||||
T Consensus       669 ~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYIH~~---giIHRDL  723 (1351)
T KOG1035|consen  669 LILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAYIHDQ---GIIHRDL  723 (1351)
T ss_pred             eEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHHHhC---ceeeccC
Confidence            3578899999988887777653321  13667788999999999999999   9999997

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=98.57  E-value=2e-08  Score=52.62  Aligned_cols=69  Identities=19%  Similarity=0.295  Sum_probs=54.6

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .|.|++++|+|..+...++.||.|. -+.+..++....+  +++..+..+...+..++.||-+..  +++|||+
T Consensus       150 cpyIV~c~GyFi~n~dV~IcMelMs-~C~ekLlkrik~p--iPE~ilGk~tva~v~AL~YLKeKH--~viHRDv  218 (391)
T KOG0983|consen  150 CPYIVQCFGYFITNTDVFICMELMS-TCAEKLLKRIKGP--IPERILGKMTVAIVKALYYLKEKH--GVIHRDV  218 (391)
T ss_pred             CCeeeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHhcCC--chHHhhhhhHHHHHHHHHHHHHhc--ceeeccc
Confidence            4889999999999999999999884 3566666543322  778777788888999999996543  8999995

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.55  E-value=3.1e-06  Score=43.72  Aligned_cols=69  Identities=36%  Similarity=0.532  Sum_probs=56.9

Q ss_pred             ceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            4 NIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         4 ~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +++++.+.+......+++++++.++.+...+........+.......+..+++.++.++|..   +++|||+
T Consensus        59 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~  127 (384)
T COG0515          59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDI  127 (384)
T ss_pred             ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCC
Confidence            68899998877777899999999999986665432101277888889999999999999999   8999996

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.54  E-value=3.2e-07  Score=45.49  Aligned_cols=51  Identities=18%  Similarity=0.268  Sum_probs=39.9

Q ss_pred             EeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           12 CLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        12 ~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +......++++|+++++++...+....    .      .++.+++.++.++|..   +++|+|+
T Consensus        66 ~~~~~~~~lv~e~~~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH~~---gi~H~Dl  116 (199)
T TIGR03724        66 DVDPDNKTIVMEYIEGKPLKDVIEEGN----D------ELLREIGRLVGKLHKA---GIVHGDL  116 (199)
T ss_pred             EEECCCCEEEEEEECCccHHHHHhhcH----H------HHHHHHHHHHHHHHHC---CeecCCC
Confidence            344556789999999999987764311    1      6778899999999999   9999996

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>smart00090 RIO RIO-like kinase

Probab=98.46  E-value=6.2e-07  Score=45.98  Aligned_cols=53  Identities=9%  Similarity=0.120  Sum_probs=40.2

Q ss_pred             eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCC-eEeccC
Q 039179           17 CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPS-IIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-i~hrdl   75 (75)
                      ..++++|++.++++.........   ........++.+++.++.++|..   + ++|||+
T Consensus       122 ~~~lV~E~~~g~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Di  175 (237)
T smart00090      122 RNVLVMEFIGGDGLPAPRLKDVE---PEEEEEFELYDDILEEMRKLYKE---GELVHGDL  175 (237)
T ss_pred             CceEEEEEecCCcccccccccCC---cchHHHHHHHHHHHHHHHHHHhc---CCEEeCCC
Confidence            35799999998877654322111   44455677889999999999999   8 999996

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.39  E-value=5.3e-08  Score=50.61  Aligned_cols=69  Identities=22%  Similarity=0.535  Sum_probs=51.3

Q ss_pred             CCCceeeEeeEEee--------CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLH--------KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      .|+|++.++..|..        ...+++++++|.. ++.-.+.....  .+....+..+..++..|+.|+|.+   .|+|
T Consensus        74 kHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~v--r~sls~Ikk~Mk~Lm~GL~~iHr~---kilH  147 (376)
T KOG0669|consen   74 KHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKV--RFSLSEIKKVMKGLMNGLYYIHRN---KILH  147 (376)
T ss_pred             cchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCccc--cccHHHHHHHHHHHHHHHHHHHHh---hHHh
Confidence            37777776666543        2468999999965 55555543211  278888999999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      ||.
T Consensus       148 RDm  150 (376)
T KOG0669|consen  148 RDM  150 (376)
T ss_pred             hcc
Confidence            995

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.39  E-value=2.6e-06  Score=43.25  Aligned_cols=57  Identities=11%  Similarity=0.156  Sum_probs=41.1

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ++++.++++.    +..++++||+.+.++......       .   ...+..++..++.++|..   +++|||+
T Consensus        61 ~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~-------~---~~~~~~qi~~~L~~lH~~---GIvHrDL  117 (218)
T PRK12274         61 LPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR-------G---DLAYFRAARRLLQQLHRC---GVAHNDL  117 (218)
T ss_pred             CCCCCEEEEE----cCEEEEEeeecCccHHhhhhh-------h---hHHHHHHHHHHHHHHHHC---cCccCCC
Confidence            3566777664    346899999998887543211       1   134567888999999999   9999997

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.38  E-value=1.2e-07  Score=54.02  Aligned_cols=67  Identities=18%  Similarity=0.278  Sum_probs=49.4

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+|++.....+.......-.|||+++ ++...+.....   +....+..+..|+..|+.|+|..   ++.|||+
T Consensus       380 h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~---~~~~e~~c~fKqL~~Gv~y~h~~---Giahrdl  446 (601)
T KOG0590|consen  380 HPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGK---LTPLEADCFFKQLLRGVKYLHSM---GLAHRDL  446 (601)
T ss_pred             CCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccc---cchhhhhHHHHHHHHHHHHHHhc---CceeccC
Confidence            45554443333333333444899998 88888876423   77888889999999999999999   9999996

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.29  E-value=1.9e-06  Score=49.56  Aligned_cols=65  Identities=18%  Similarity=0.295  Sum_probs=50.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||+|++++..+...+..|+++|-+.  .+...+..      +......-.+.|+..++.|||+.+  .++|+++
T Consensus        67 RHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv  131 (690)
T KOG1243|consen   67 RHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKEEVCLGLFQILAALSFLNDDC--NLVHGNV  131 (690)
T ss_pred             cCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHHHHHHHHHHHHHHHHHHhccC--CeeeccE
Confidence            69999999999999999999999774  55555554      333344555679999999998655  8889764

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.28  E-value=1.6e-08  Score=53.09  Aligned_cols=67  Identities=21%  Similarity=0.345  Sum_probs=45.5

Q ss_pred             CCceeeEeeEEeeCC-----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKK-----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |.|+....+....+.     ++|++.|.+. .++.+.+.+.+.   +....+..++.||..|+.|||+.   +|.|||+
T Consensus       111 HdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVSPQ~---Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDI  182 (449)
T KOG0664|consen  111 HDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVSPQA---LTPDHVKVFVYQILRGLKYLHTA---NILHRDI  182 (449)
T ss_pred             cccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheeccCCC---CCcchhhhhHHHHHhhhHHHhhc---chhhccC
Confidence            445544444333222     3566677764 355555544333   77778888999999999999999   9999996

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.28  E-value=4.8e-06  Score=42.73  Aligned_cols=60  Identities=17%  Similarity=0.309  Sum_probs=43.8

Q ss_pred             CCceeeEeeEEeeC--------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEec
Q 039179            2 HQNIVKLYGFCLHK--------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYR   73 (75)
Q Consensus         2 h~~i~~~~~~~~~~--------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hr   73 (75)
                      |+++....+.+...        +..+++|||+++.++.+...       +..    ....++..++..+|..   +++|+
T Consensus        94 ~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~  159 (232)
T PRK10359         94 SEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSG  159 (232)
T ss_pred             HCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccC
Confidence            66777766664432        35789999999998876631       222    2345788899999999   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      |+
T Consensus       160 Di  161 (232)
T PRK10359        160 DP  161 (232)
T ss_pred             CC
Confidence            96

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.25  E-value=2.7e-08  Score=51.87  Aligned_cols=71  Identities=25%  Similarity=0.305  Sum_probs=51.4

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhc--cCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK--ENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      -|||++++|.+..++..|+.||+|.- ++..+.+.  ......+++..+..+.-....++.||-...  .|||||+
T Consensus       122 cp~IVkfyGa~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDv  194 (361)
T KOG1006|consen  122 CPNIVKFYGALFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDV  194 (361)
T ss_pred             CcHHHHHhhhhhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccC
Confidence            47999999999999999999999964 44444332  011122677766677777788999996543  7899985

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.19  E-value=1.7e-06  Score=51.69  Aligned_cols=57  Identities=16%  Similarity=0.191  Sum_probs=48.4

Q ss_pred             eeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           13 LHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        13 ~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ...+...+++||.+.|+|.+.+....   ...+-.+..++.+++.-+..+|..   +|||+||
T Consensus       764 ~~~~~S~lv~ey~~~Gtlld~~N~~~---~m~e~lv~~~~~qml~ive~lH~~---~IIHgDi  820 (974)
T KOG1166|consen  764 VFQNASVLVSEYSPYGTLLDLINTNK---VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDI  820 (974)
T ss_pred             ccCCcceeeeeccccccHHHhhccCC---CCCchhhhHHHHHHHHHHHHHHhc---ceecccC
Confidence            33456789999999999999986433   378888889999999999999999   9999997

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.06  E-value=3.3e-05  Score=36.20  Aligned_cols=63  Identities=17%  Similarity=0.161  Sum_probs=44.6

Q ss_pred             CceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            3 QNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         3 ~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .++.+++.....++..++++|++.++.+...          +......+..+++.++..+|.....+++|+|+
T Consensus        53 ~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl  115 (155)
T cd05120          53 LPVPKVLASGESDGWSYLLMEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDL  115 (155)
T ss_pred             CCCCeEEEEcCCCCccEEEEEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCC
Confidence            3566777766666778999999987655322          22344556778888999999853346999986

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.05  E-value=1.4e-05  Score=41.69  Aligned_cols=58  Identities=17%  Similarity=0.213  Sum_probs=45.4

Q ss_pred             EeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           12 CLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        12 ~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ......-.++|+.. +.++++...-....  ++...++.++.|+..-+.|+|..   .++|||+
T Consensus        80 ~~e~~ynvlVMdLL-GPsLEdLfnfC~R~--ftmkTvLMLaDQml~RiEyvH~r---~fiHRDI  137 (341)
T KOG1163|consen   80 GTEKDYNVLVMDLL-GPSLEDLFNFCSRR--FTMKTVLMLADQMLSRIEYVHLR---NFIHRDI  137 (341)
T ss_pred             ccccccceeeeecc-CccHHHHHHHHhhh--hhHHhHHHHHHHHHHHHHHHHhh---ccccccC
Confidence            34445567889987 56787776543222  78888999999999999999999   9999996

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.01  E-value=7.7e-05  Score=38.47  Aligned_cols=46  Identities=13%  Similarity=0.225  Sum_probs=35.0

Q ss_pred             EEEEecCCC-CCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           19 FAIYKYMER-GSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        19 ~~~~e~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ++++|++++ .++...+... .   ++..    ...+++.++.++|+.   +++|||+
T Consensus       122 ~lV~e~l~G~~~L~~~l~~~-~---l~~~----~~~~i~~~l~~lH~~---GI~HrDl  168 (239)
T PRK01723        122 DILIERIEGARDLVALLQEA-P---LSEE----QWQAIGQLIARFHDA---GVYHADL  168 (239)
T ss_pred             eEEEEecCCCCCHHHHHhcC-C---CCHH----HHHHHHHHHHHHHHC---CCCCCCC
Confidence            599999987 6888776542 1   4332    246788999999999   9999996

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.77  E-value=6.7e-05  Score=37.40  Aligned_cols=48  Identities=15%  Similarity=0.169  Sum_probs=36.4

Q ss_pred             CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           16 KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        16 ~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ...++++||++++++......         .....++.++..++.++|..   +++|+|+
T Consensus       104 ~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl  151 (198)
T cd05144         104 NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDL  151 (198)
T ss_pred             CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence            345899999999887654320         23456778889999999998   9999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.72  E-value=0.00032  Score=35.53  Aligned_cols=60  Identities=12%  Similarity=0.135  Sum_probs=41.9

Q ss_pred             EeeCCeEEEEEecCCC-CCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           12 CLHKKCMFAIYKYMER-GSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        12 ~~~~~~~~~~~e~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +.+...-.+.|||.++ .++.+++....... ........++..+...+.-||.+   .++|+||
T Consensus        79 ~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~n---diiHGDL  139 (229)
T KOG3087|consen   79 FIDTYGGQIYMEFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDN---DIIHGDL  139 (229)
T ss_pred             EEecCCCeEEEEeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhC---Ceecccc
Confidence            3444555688999976 47778877644322 22233356777888889999999   9999997

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.71  E-value=0.00024  Score=35.83  Aligned_cols=53  Identities=15%  Similarity=0.137  Sum_probs=34.2

Q ss_pred             CeEEEEEecCCCCCHH-HHhhccCCcccCCHHhHHHHHHHHHHHhhHh-hhCCCCCeEeccC
Q 039179           16 KCMFAIYKYMERGSLC-CVLHKENEALELNWTNNVNIAKCVAHALSYL-HHHCTPSIIYRDI   75 (75)
Q Consensus        16 ~~~~~~~e~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~~i~hrdl   75 (75)
                      ..-+++|||+.++.+. ..++.. .   +.......+..++...+..+ |..   +++|+|+
T Consensus        97 ~~~~lvME~Ig~~~~~~~~Lkd~-~---~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL  151 (197)
T cd05146          97 KKHVLVMSFIGDDQVPAPKLKDA-K---LNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL  151 (197)
T ss_pred             cCCEEEEEEcCCCCccchhhhcc-c---cCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            3457899999764332 122211 1   33344555667888888877 788   9999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.69  E-value=2.3e-05  Score=44.90  Aligned_cols=69  Identities=26%  Similarity=0.266  Sum_probs=58.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+.++++.-.+..+...+++.++..+|.+...+.....   +.+.....+....+.++..+|..   ++++||+
T Consensus        55 ~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~---f~~~~~~~~~aelaLald~lh~l---~iiyrd~  123 (612)
T KOG0603|consen   55 NTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVM---FDELDVAFYLAELALALDHLHKL---GIAYRDY  123 (612)
T ss_pred             CCCceeeeeeeeccccchhHhhhhcccchhhhccccCCc---hHHHHHHHHHHHHHHHHhhcchh---HHHHhcc
Confidence            378899999999999999999999999998877765433   66677777888899999999998   9999885

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.57  E-value=0.00027  Score=38.64  Aligned_cols=53  Identities=23%  Similarity=0.324  Sum_probs=42.3

Q ss_pred             eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           17 CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .-.+++|++ +.+|+++.--.+..  +....+..++.|++.-+.++|+.   .+|+||+
T Consensus        98 ~NiLVidLL-GPSLEDLFD~CgR~--FSvKTV~miA~Qmi~rie~vH~k---~LIYRDI  150 (449)
T KOG1165|consen   98 YNILVIDLL-GPSLEDLFDLCGRR--FSVKTVAMIAKQMITRIEYVHEK---DLIYRDI  150 (449)
T ss_pred             hhhhhhhhh-CcCHHHHHHHhcCc--ccHHhHHHHHHHHHHHHHHHHhc---ceeeccc
Confidence            445788877 56777776543332  78888999999999999999999   9999996

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.53  E-value=0.00017  Score=35.48  Aligned_cols=52  Identities=6%  Similarity=0.070  Sum_probs=35.4

Q ss_pred             eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179           17 CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      ..++++|+++++..........    ........+..+++.++.++|. .   +++|+|+
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl  141 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKDV----RLLEDPEELYDQILELMRKLYREA---GLVHGDL  141 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhhh----hhcccHHHHHHHHHHHHHHHhhcc---CcCcCCC
Confidence            3579999999854321111100    1114567788899999999998 7   9999996

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.47  E-value=0.0011  Score=34.97  Aligned_cols=55  Identities=20%  Similarity=0.029  Sum_probs=40.8

Q ss_pred             eEEEEEecCCCC-CHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           17 CMFAIYKYMERG-SLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ..++++|++++. ++.+++..... ..........+..+++..+.-||..   +++|+|+
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL  164 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDC  164 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCC
Confidence            578999999875 78777643111 1134455567888899999999999   9999996

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=97.39  E-value=0.00013  Score=41.82  Aligned_cols=68  Identities=21%  Similarity=0.270  Sum_probs=53.5

Q ss_pred             ceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            4 NIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         4 ~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+++++..|...+.+++++|.+. -+|..++++-+...++....+..++.|+..++.+|-..   +++|.||
T Consensus       495 Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDI  562 (752)
T KOG0670|consen  495 HCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADI  562 (752)
T ss_pred             HHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---Ceeeccc
Confidence            45566666777788999999774 36777777655444577788889999999999999888   9999986

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.31  E-value=0.002  Score=32.60  Aligned_cols=53  Identities=17%  Similarity=0.250  Sum_probs=40.3

Q ss_pred             eEEEEEecCCCC-CHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           17 CMFAIYKYMERG-SLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ..++++|.+++. ++..++.....   ........+..+++..+.-||..   +++|+|+
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i~~lH~~---gi~H~Dl  144 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLIAKLHDA---GIYHGDL  144 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHHHHHHHC---cCCCCCC
Confidence            457899998864 78877765222   34445667788889999999999   9999996

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=97.24  E-value=0.0011  Score=32.22  Aligned_cols=37  Identities=24%  Similarity=0.179  Sum_probs=29.9

Q ss_pred             CCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCC
Q 039179           28 GSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHC   66 (75)
Q Consensus        28 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~   66 (75)
                      |+|.+.+...+.  .+++..+..++.|++.|+.|+|...
T Consensus         1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~~~   37 (176)
T smart00750        1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHRQA   37 (176)
T ss_pred             CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            577788765332  2899999999999999999999863

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.19  E-value=0.0024  Score=32.31  Aligned_cols=51  Identities=18%  Similarity=0.260  Sum_probs=36.6

Q ss_pred             EeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           12 CLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        12 ~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ..++....++|||.++..+.+.+...          ...++..+-.-+.-||..   +|+|+||
T Consensus        68 dvD~~~~~I~me~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDL  118 (204)
T COG3642          68 DVDPDNGLIVMEYIEGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDL  118 (204)
T ss_pred             EEcCCCCEEEEEEeCChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCC
Confidence            34566778999999988877676542          133445555567778999   9999996

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.13  E-value=0.00011  Score=42.47  Aligned_cols=69  Identities=23%  Similarity=0.356  Sum_probs=55.7

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHh-hccCCcccCCHHhHHHHHHHHHHHhhHhh-hCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVL-HKENEALELNWTNNVNIAKCVAHALSYLH-HHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~hrdl   75 (75)
                      |.|++.+++....++..+++.++..++++...+ .....  .........++.++..++.|+| ..   ++.|||+
T Consensus        80 h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~--~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~i  150 (601)
T KOG0590|consen   80 HSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDST--GTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDI  150 (601)
T ss_pred             cccccccCCccCCCcccccccCcccccccccccccCCcc--CCCCcchhhhhhhhccCccccCccc---ccccCCC
Confidence            789999999999999999999998888887776 33221  1455566788899999999999 77   8889885

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.36  E-value=0.0013  Score=37.73  Aligned_cols=68  Identities=15%  Similarity=0.126  Sum_probs=50.4

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |.+++.+...+......++-.||+.+++......-...   +.+...+.+..++..++.++|..   .++|+|+
T Consensus       325 ~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~---~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~  392 (524)
T KOG0601|consen  325 HLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQM---LDEDPRLRLTAQILTALNVIHSK---LFVHLDV  392 (524)
T ss_pred             ccccCCCCCCccccccccCchhhhcCcchhhhhHHHHh---cCcchhhhhHHHHHhccccccch---hhhcccc
Confidence            45566666666666667788899988887766533222   66677788899999999999988   8899875

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.87  E-value=0.018  Score=29.01  Aligned_cols=50  Identities=16%  Similarity=0.218  Sum_probs=26.3

Q ss_pred             EEEEEecCC--CCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhH-hhhCCCCCeEeccC
Q 039179           18 MFAIYKYME--RGSLCCVLHKENEALELNWTNNVNIAKCVAHALSY-LHHHCTPSIIYRDI   75 (75)
Q Consensus        18 ~~~~~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~i~hrdl   75 (75)
                      -.++|||+.  +..+.. +....    +.......+..++...+.. +|..   +++|+|+
T Consensus        81 ~~ivME~I~~~G~~~~~-l~~~~----~~~~~~~~~~~~il~~~~~~~~~~---givHGDL  133 (188)
T PF01163_consen   81 NVIVMEYIGEDGVPLPR-LKDVD----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDL  133 (188)
T ss_dssp             TEEEEE--EETTEEGGC-HHHCG----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-
T ss_pred             CEEEEEecCCCccchhh-HHhcc----ccchhHHHHHHHHHHHHHHHHHhc---CceecCC
Confidence            369999998  434433 22211    1123344555566664444 4677   9999996

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=95.68  E-value=0.038  Score=31.32  Aligned_cols=52  Identities=12%  Similarity=0.155  Sum_probs=31.4

Q ss_pred             CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHH-HhhHhhhCCCCCeEeccC
Q 039179           16 KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAH-ALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        16 ~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~~~~~~~i~hrdl   75 (75)
                      ...+++|||+.++++.+........  ...   ..++..+.. .+..+|..   +++|+|+
T Consensus       231 ~~~vLvmE~i~G~~L~~~~~~~~~~--~~~---~~ia~~~~~~~l~ql~~~---g~~H~D~  283 (437)
T TIGR01982       231 SERVLTMEWIDGIPLSDIAALDEAG--LDR---KALAENLARSFLNQVLRD---GFFHADL  283 (437)
T ss_pred             CCceEEEEeECCcccccHHHHHhcC--CCH---HHHHHHHHHHHHHHHHhC---CceeCCC
Confidence            3468999999999887765431111  221   223333333 34556777   9999985

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.52  E-value=0.04  Score=26.59  Aligned_cols=48  Identities=17%  Similarity=0.142  Sum_probs=31.1

Q ss_pred             eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCC--CCCeEeccC
Q 039179           17 CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHC--TPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~~i~hrdl   75 (75)
                      .-++++|++++.++...  .      ..   ......++...+..+|...  ...++|+|+
T Consensus        65 ~~~lv~e~i~G~~l~~~--~------~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~  114 (170)
T cd05151          65 TGVLITEFIEGSELLTE--D------FS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDL  114 (170)
T ss_pred             CCeEEEEecCCCccccc--c------cc---CHHHHHHHHHHHHHHhCCCCCCceeecCCC
Confidence            35789999998776432  0      11   1234567888889999872  123699995

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=95.38  E-value=0.0063  Score=34.91  Aligned_cols=53  Identities=23%  Similarity=0.322  Sum_probs=40.5

Q ss_pred             eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           17 CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .+++.|++|..+++.+++................+..|+..++.|   +   +.+|||+
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdl  382 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDL  382 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhc
Confidence            467889999999999999753333335666778888899989888   4   7778875

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=95.37  E-value=0.14  Score=30.23  Aligned_cols=65  Identities=17%  Similarity=0.195  Sum_probs=46.4

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCC-CCHHHHhhccC------------CcccCCHHhHHHHHHHHHHHhhHhh
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMER-GSLCCVLHKEN------------EALELNWTNNVNIAKCVAHALSYLH   63 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~-~~l~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~~l~   63 (75)
                      .|+|++++..++..    +..+.++++|.+. ++|.+.--...            .+...++..++.++.|+..++.++|
T Consensus       331 ~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH  410 (655)
T KOG3741|consen  331 CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH  410 (655)
T ss_pred             ccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            38899999998874    3478899999875 34544332110            1112467788899999999999999


Q ss_pred             hC
Q 039179           64 HH   65 (75)
Q Consensus        64 ~~   65 (75)
                      ..
T Consensus       411 ss  412 (655)
T KOG3741|consen  411 SS  412 (655)
T ss_pred             hc
Confidence            87

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=94.52  E-value=0.0018  Score=40.44  Aligned_cols=30  Identities=30%  Similarity=0.189  Sum_probs=24.7

Q ss_pred             CCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           43 LNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        43 ~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +...+..-++.|+..++.-.|..   +++|+||
T Consensus       117 L~~iEKkWiaFQLL~al~qcH~~---gVcHGDI  146 (1431)
T KOG1240|consen  117 LVLIEKKWIAFQLLKALSQCHKL---GVCHGDI  146 (1431)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHc---Ccccccc
Confidence            44445566788999999999999   9999996

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=94.17  E-value=0.15  Score=25.55  Aligned_cols=57  Identities=21%  Similarity=0.287  Sum_probs=37.8

Q ss_pred             eeeEeeEEeeC---CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhC
Q 039179            5 IVKLYGFCLHK---KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHH   65 (75)
Q Consensus         5 i~~~~~~~~~~---~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~   65 (75)
                      +.+++......   +..++++|++++.++...... .   .+.......++.+++..+..+|..
T Consensus        59 vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~-~---~~~~~~~~~i~~~i~~~l~~lH~~  118 (223)
T cd05154          59 VPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR-P---ELSPEERRALARALADTLAALHSV  118 (223)
T ss_pred             CCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC-C---CCCHHHHHHHHHHHHHHHHHHhCC
Confidence            34444444332   256899999998877654421 1   156666677888999999999975

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK09902 hypothetical protein; Provisional

Probab=93.83  E-value=0.48  Score=24.70  Aligned_cols=55  Identities=13%  Similarity=-0.052  Sum_probs=38.8

Q ss_pred             eEEEEEecCC-CCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           17 CMFAIYKYME-RGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ..++++|-+. ..+|..++.... ....+......+..+++..+.-||+.   ++.|+|+
T Consensus        99 rA~LVTe~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdl  154 (216)
T PRK09902         99 RALLVTEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCC  154 (216)
T ss_pred             EEEEEEEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCC
Confidence            4678888654 357777765421 11145555567888899999999999   9999985

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=93.68  E-value=0.12  Score=30.22  Aligned_cols=68  Identities=24%  Similarity=0.102  Sum_probs=47.5

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHH----HhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAH----ALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~l~~~~~~~i~hrdl   75 (75)
                      |++.++....+..++..++-+|.+. .++..+......  .++...+.....+...    |+.++|..   .++|-|+
T Consensus       177 ~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~  248 (524)
T KOG0601|consen  177 HENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDL  248 (524)
T ss_pred             cccccccCcccccCCcceeeecccc-chhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCC---ccccccc
Confidence            5677777777777888889899886 455555433221  1556666666666666    99999998   8888764

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=93.22  E-value=0.11  Score=30.38  Aligned_cols=18  Identities=11%  Similarity=-0.057  Sum_probs=14.6

Q ss_pred             CeEEEEEecCCCCCHHHH
Q 039179           16 KCMFAIYKYMERGSLCCV   33 (75)
Q Consensus        16 ~~~~~~~e~~~~~~l~~~   33 (75)
                      ....++|||+.++++.+.
T Consensus       234 t~~VLvmE~i~G~~l~d~  251 (537)
T PRK04750        234 SETVMVMERMYGIPVSDV  251 (537)
T ss_pred             CCceEEEeeecCccHHhH
Confidence            345799999999998764

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=93.08  E-value=0.27  Score=25.79  Aligned_cols=45  Identities=20%  Similarity=0.313  Sum_probs=30.1

Q ss_pred             eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           17 CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ..++++||+++..+.+...       +..    .....+..++.-+|..   ++.|+|+
T Consensus       117 ~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~---G~~HGD~  161 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKH---GFYHGDP  161 (229)
T ss_pred             EEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHc---CCccCCC
Confidence            4568999999876644321       222    2334466677888998   9999985

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=92.15  E-value=0.29  Score=26.53  Aligned_cols=53  Identities=15%  Similarity=0.286  Sum_probs=31.6

Q ss_pred             EEEEecCCCCCHHHHhhc---cCC-cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           19 FAIYKYMERGSLCCVLHK---ENE-ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        19 ~~~~e~~~~~~l~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ++.++-+ .+++..++..   ... ...+.......+..|+..-+.++|..   +++|+|+
T Consensus       115 ~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi  171 (288)
T PF14531_consen  115 FLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI  171 (288)
T ss_dssp             EEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred             hhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence            4455555 4577666543   111 11122333345667889999999999   9999986

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=89.57  E-value=1.2  Score=24.08  Aligned_cols=51  Identities=10%  Similarity=0.115  Sum_probs=30.0

Q ss_pred             EEEEEecCCCC-CHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179           18 MFAIYKYMERG-SLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus        18 ~~~~~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      -.++|||+... .-...++...    +.......+..++..++.-|-. .   +++|+||
T Consensus       141 nVLvMEfIg~~g~pAP~LkDv~----~e~~e~~~~~~~~v~~~~~l~~~a---~LVHgDL  193 (268)
T COG1718         141 NVLVMEFIGDDGLPAPRLKDVP----LELEEAEGLYEDVVEYMRRLYKEA---GLVHGDL  193 (268)
T ss_pred             CeEEEEeccCCCCCCCCcccCC----cCchhHHHHHHHHHHHHHHHHHhc---Ccccccc
Confidence            35899998654 2222222111    2232456666677777776665 5   8999986

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=89.28  E-value=1  Score=26.80  Aligned_cols=52  Identities=6%  Similarity=-0.038  Sum_probs=27.1

Q ss_pred             CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179           16 KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus        16 ~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      ....++|||+.|..+.+.-.-....  +....+..-+.+...-+.+-+     +++|.|
T Consensus       275 t~RVLtME~~~G~~i~Dl~~i~~~g--i~~~~i~~~l~~~~~~qIf~~-----GffHaD  326 (538)
T KOG1235|consen  275 TKRVLTMEYVDGIKINDLDAIDKRG--ISPHDILNKLVEAYLEQIFKT-----GFFHAD  326 (538)
T ss_pred             cceEEEEEecCCccCCCHHHHHHcC--CCHHHHHHHHHHHHHHHHHhc-----CCccCC
Confidence            3467999999998766553321111  444444443333332222222     566766

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=87.61  E-value=0.21  Score=31.78  Aligned_cols=67  Identities=18%  Similarity=0.159  Sum_probs=42.2

Q ss_pred             CceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            3 QNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         3 ~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |.+++....+.......+++++..++.+...+.....   ....-...+...+.++..+||..   .+.|||+
T Consensus       864 P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~s~---~r~h~~~  930 (1205)
T KOG0606|consen  864 PAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLHSS---LRKHRDL  930 (1205)
T ss_pred             CceecccCCCCCCCCcchhhHHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccccc---hhhcccc
Confidence            3333333333445678899999988888888766432   22222333445577788888887   6788874

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=87.60  E-value=1  Score=24.67  Aligned_cols=48  Identities=17%  Similarity=0.178  Sum_probs=26.3

Q ss_pred             eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           17 CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .-.++||+..+-.+...-        +.......++..+...+.-.-..   +++|+|+
T Consensus       181 RHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDl  228 (304)
T COG0478         181 RHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDL  228 (304)
T ss_pred             cceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCC
Confidence            457899999875553322        11222233344444444444455   8999986

>PLN02876 acyl-CoA dehydrogenase

Probab=80.48  E-value=7.8  Score=24.41  Aligned_cols=56  Identities=21%  Similarity=0.304  Sum_probs=35.2

Q ss_pred             eeeEeeEEeeC---CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhC
Q 039179            5 IVKLYGFCLHK---KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHH   65 (75)
Q Consensus         5 i~~~~~~~~~~---~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~   65 (75)
                      +.+.+..+.+.   +..+++||++++..+.+.     ....+.......+..++...+..||..
T Consensus       103 VP~v~~~~~d~~v~G~~flVME~v~G~~~~~~-----~~~~~~~~~r~~l~~~l~~~La~LH~v  161 (822)
T PLN02876        103 VPKVYCLCTDASVIGTAFYIMEYLEGRIFVDP-----KLPGVAPERRRAIYRATAKVLAALHSA  161 (822)
T ss_pred             CCcEEEEecCCCcCCCceEEEEecCCcccCCc-----cCCCCCHHHHHHHHHHHHHHHHHHhCC
Confidence            35666666553   457899999987543211     001144555566778888888888874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	75
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-11
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		5e-11
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-07
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-07
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-05
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		5e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		5e-05
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		5e-05
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		6e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		6e-05
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-04
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		7e-04

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALE-LNWTNNVNIAKCVAHALS 60
           H+N+++L GFC+       +Y YM  GS+   L +  E+   L+W     IA   A  L+
Sbjct: 86  HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 61  YLHHHCTPSIIYRDI 75
           YLH HC P II+RD+
Sbjct: 146 YLHDHCDPKIIHRDV 160

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALE-LNWTNNVNIAKCVAHALS 60
           H+N+++L GFC+       +Y YM  GS+   L +  E+   L+W     IA   A  L+
Sbjct: 94  HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 61  YLHHHCTPSIIYRDI 75
           YLH HC P II+RD+
Sbjct: 154 YLHDHCDPKIIHRDV 168

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHAL 59
           +H ++V L GFC  +  M  IYKYME G+L   L+  +   + ++W   + I    A  L
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 60  SYLHHHCTPSIIYRDI 75
            YLH   T +II+RD+
Sbjct: 153 HYLH---TRAIIHRDV 165

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHAL 59
           +H ++V L GFC  +  M  IYKYME G+L   L+  +   + ++W   + I    A  L
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 60  SYLHHHCTPSIIYRDI 75
            YLH   T +II+RD+
Sbjct: 153 HYLH---TRAIIHRDV 165

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NIV   G       +  + +Y+ RGSL  +LHK     +L+    +++A  VA  ++
Sbjct: 92  RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 61  YLHHHCTPSIIYRDI 75
           YLH+   P I++RD+
Sbjct: 152 YLHNR-NPPIVHRDL 165

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH+N+V+L GF      +  +Y YM  GSL   L   +    L+W     IA+  A+ ++
Sbjct: 88  QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 61  YLH--HHCTPSIIYRDI 75
           +LH  HH     I+RDI
Sbjct: 148 FLHENHH-----IHRDI 159

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSY 61
           H NIVKLYG CL+  C+  + +Y E GSL  VLH           + ++     +  ++Y
Sbjct: 61  HPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 62  LHHHCTPSIIYRDI 75
           LH     ++I+RD+
Sbjct: 119 LHSMQPKALIHRDL 132

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH+N+V+L GF      +  +Y YM  GSL   L   +    L+W     IA+  A+ ++
Sbjct: 88  QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 61  YLH--HHCTPSIIYRDI 75
           +LH  HH     I+RDI
Sbjct: 148 FLHENHH-----IHRDI 159

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH+N+V+L GF      +  +Y YM  GSL   L   +    L+W     IA+  A+ ++
Sbjct: 82  QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 141
Query: 61  YLH--HHCTPSIIYRDI 75
           +LH  HH     I+RDI
Sbjct: 142 FLHENHH-----IHRDI 153

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NIV   G       +  + +Y+ RGSL  +LHK     +L+    +++A  VA  ++
Sbjct: 92  RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 61  YLHHHCTPSIIYRDI 75
           YLH+   P I++R++
Sbjct: 152 YLHNR-NPPIVHRNL 165

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSY 61
           H NIVKLYG CL+  C+  + +Y E GSL  VLH           + ++     +  ++Y
Sbjct: 60  HPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 62  LHHHCTPSIIYRDI 75
           LH     ++I+RD+
Sbjct: 118 LHSMQPKALIHRDL 131

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH+N+V+L GF      +  +Y Y   GSL   L   +    L+W     IA+  A+ ++
Sbjct: 79  QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 61  YLH--HHCTPSIIYRDI 75
           +LH  HH     I+RDI
Sbjct: 139 FLHENHH-----IHRDI 150

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL----------CCVLHKENEALELNWTNNVN 50
           QH++IVK YG C+    +  +++YM+ G L            ++ + N   EL  +  ++
Sbjct: 73  QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 51  IAKCVAHALSYLHHHCTPSIIYRDI 75
           IA+ +A  + YL    +   ++RD+
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDL 154

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	75
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	7e-23
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-20
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-19
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-18
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-18
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-16
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-13
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-13
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	5e-13
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	6e-12
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-11
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	9e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-09
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	8e-09
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	9e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-08
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-08
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	4e-08
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-08
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-08
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-08
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-07
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-07
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-07
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-07
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-07
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	6e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	6e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	6e-07
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	8e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-07
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-06
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-06
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-06
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-06
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-06
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-06
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-06
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-06
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	5e-06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	6e-06
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	7e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	9e-06
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	9e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-05
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-05
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-05
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	6e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	8e-05
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-04
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 87.6 bits (218), Expect = 7e-23
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLH-KENEALELNWTNNVNIAKCVAHAL 59
            H+N+++L GFC+       +Y YM  GS+   L  +      L+W     IA   A  L
Sbjct: 85  VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGL 144

Query: 60  SYLHHHCTPSIIYRDI 75
           +YLH HC P II+RD+
Sbjct: 145 AYLHDHCDPKIIHRDV 160

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 79.7 bits (197), Expect = 5e-20
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NIVKLYG CL+  C+  + +Y E GSL  VLH           + ++     +  ++
Sbjct: 59  NHPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116

Query: 61  YLHHHCTPSIIYRDI 75
           YLH     ++I+RD+
Sbjct: 117 YLHSMQPKALIHRDL 131

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 77.2 bits (191), Expect = 5e-19
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH+N+V+L GF      +  +Y YM  GSL   L   +    L+W     IA+  A+ ++
Sbjct: 88  QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147

Query: 61  YLHHHCTPSIIYRDI 75
           +LH +     I+RDI
Sbjct: 148 FLHENH---HIHRDI 159

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 75.3 bits (186), Expect = 2e-18
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLH-KENEALELNWTNNVNIAKCVAHAL 59
           +H ++V L GFC  +  M  IYKYME G+L   L+  +   + ++W   + I    A  L
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152

Query: 60  SYLHHHCTPSIIYRDI 75
            YLH   T +II+RD+
Sbjct: 153 HYLH---TRAIIHRDV 165

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 74.7 bits (184), Expect = 4e-18
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NIV   G       +  + +Y+ RGSL  +LHK     +L+    +++A  VA  ++
Sbjct: 92  RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151

Query: 61  YLHHHCTPSIIYRD 74
           YL H+  P I++R+
Sbjct: 152 YL-HNRNPPIVHRN 164

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 72.0 bits (177), Expect = 3e-17
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NIVKLYG   +   M  + +++  G L   L  +     + W+  + +   +A  + 
Sbjct: 81  NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIE 136

Query: 61  YLHHHCTPSIIYRDI 75
           Y+  +  P I++RD+
Sbjct: 137 YM-QNQNPPIVHRDL 150

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 70.4 bits (173), Expect = 1e-16
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NI+ L G CL +  +  + ++   G L  VL  +     +     VN A  +A  ++
Sbjct: 64  KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMN 119

Query: 61  YLHHHCTPSIIYRDI 75
           YLH      II+RD+
Sbjct: 120 YLHDEAIVPIIHRDL 134

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 65.1 bits (159), Expect = 1e-14
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 15/86 (17%)

Query: 1   QHQNIVKLYGFCLHKKCMFA----IYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVA 56
           +H+NI++  G       +      I  + E+GSL   L        ++W    +IA+ +A
Sbjct: 76  KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMA 131

Query: 57  HALSYLHHH-------CTPSIIYRDI 75
             L+YLH           P+I +RDI
Sbjct: 132 RGLAYLHEDIPGLKDGHKPAISHRDI 157

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 63.9 bits (156), Expect = 3e-14
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H N++K  G     K +  I +Y++ G+L  ++   +   +  W+  V+ AK +A  ++
Sbjct: 65  EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMA 122

Query: 61  YLHHHCTPSIIYRD 74
           YLH     +II+RD
Sbjct: 123 YLHSM---NIIHRD 133

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 61.9 bits (151), Expect = 2e-13
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 1   QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHA 58
            H N++ + G C          I  +M  GSL  VLH+      ++ +  V  A  +A  
Sbjct: 65  SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHE-GTNFVVDQSQAVKFALDMARG 123

Query: 59  LSYLHHHCTPSIIYRD 74
           +++L H   P I    
Sbjct: 124 MAFL-HTLEPLIPRHA 138

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 61.6 bits (150), Expect = 2e-13
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+N+V   G C+    +  I    +  +L  V+        L+      IA+ +   + 
Sbjct: 87  RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMG 144

Query: 61  YLHHHCTPSIIYRD 74
           YLH      I+++D
Sbjct: 145 YLH---AKGILHKD 155

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 61.0 bits (148), Expect = 5e-13
 Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 15/86 (17%)

Query: 1   QHQNIVKLYGFCLHKKC-----MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCV 55
           +H NI +                  + +Y   GSL   L         +W ++  +A  V
Sbjct: 65  EHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSV 120

Query: 56  AHALSYLH------HHCTPSIIYRDI 75
              L+YLH       H  P+I +RD+
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDL 146

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 57.8 bits (140), Expect = 5e-12
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 13/84 (15%)

Query: 1   QHQNIVKLYGFCLHKKC----MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVA 56
           +H+NI+      +        ++ I  Y E GSL   L        L+  + + +A    
Sbjct: 89  RHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT----LDAKSMLKLAYSSV 144

Query: 57  HALSYLH-----HHCTPSIIYRDI 75
             L +LH         P+I +RD+
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDL 168

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 57.7 bits (140), Expect = 6e-12
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 13/84 (15%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIY----KYMERGSLCCVLHKENEALELNWTNNVNIAKCVA 56
           +H+NI+      +  +           Y E GSL   L        L+  + + I   +A
Sbjct: 60  RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIA 115

Query: 57  HALSYLH-----HHCTPSIIYRDI 75
             L++LH         P+I +RD+
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDL 139

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 56.7 bits (137), Expect = 1e-11
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 13/84 (15%)

Query: 1   QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVA 56
           +H+NI+               ++ +  Y E GSL   L++      +     + +A   A
Sbjct: 94  RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTA 149

Query: 57  HALSYLH-----HHCTPSIIYRDI 75
             L++LH         P+I +RD+
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDL 173

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 54.2 bits (131), Expect = 9e-11
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NI+   G+      +  + ++ E  SL   LH      +      ++IA+  A  + 
Sbjct: 78  RHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASET--KFEMKKLIDIARQTARGMD 134

Query: 61  YLHHHCTPSIIYRD 74
           YLH     SII+RD
Sbjct: 135 YLHAK---SIIHRD 145

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 49.9 bits (120), Expect = 3e-09
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NIV+L G C  K+ ++ + + ++ G     L  E   L +     + +    A  + 
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTL--LQMVGDAAAGME 227

Query: 61  YLHHHCTPSIIYRDI 75
           YL        I+RD+
Sbjct: 228 YLESK---CCIHRDL 239

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 48.8 bits (117), Expect = 8e-09
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIV+  G       +    + +  GSL  +L  +   L+ N        K +   L 
Sbjct: 77  KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLK 136

Query: 61  YLHHHCTPSIIYRDI 75
           YLH +    I++RDI
Sbjct: 137 YLHDNQ---IVHRDI 148

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 48.8 bits (117), Expect = 9e-09
 Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H+++V  YG C+       + ++++ GSL   L K    + + W   + +AK +A A+ 
Sbjct: 70  SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAAAMH 127

Query: 61  YL-HHHCTPSIIYRDI 75
           +L  +      I+ ++
Sbjct: 128 FLEENTL----IHGNV 139

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 48.5 bits (116), Expect = 1e-08
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 1   QHQNIVKLYGFCL----HKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVA 56
           QH NIV+ Y         KKC+  + + M  G+L   L +      +      +  + + 
Sbjct: 83  QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQIL 139

Query: 57  HALSYLHHHCTPSIIYRDI 75
             L +LH   TP II+RD+
Sbjct: 140 KGLQFLHTR-TPPIIHRDL 157

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 47.7 bits (114), Expect = 2e-08
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVL----HKENEALELNWTNNVNIAKCVA 56
            HQNIV+  G  L     F + + M  G L   L     + ++   L   + +++A+ +A
Sbjct: 91  NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150

Query: 57  HALSYL-HHHCTPSIIYRDI 75
               YL  +H     I+RDI
Sbjct: 151 CGCQYLEENHF----IHRDI 166

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 47.0 bits (112), Expect = 4e-08
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVL----HKENEALELNWTNNVNIAKCVA 56
            HQNIV+  G  L     F + + M  G L   L     + ++   L   + +++A+ +A
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191

Query: 57  HALSYL-HHHCTPSIIYRDI 75
               YL  +H     I+RDI
Sbjct: 192 CGCQYLEENHF----IHRDI 207

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 46.9 bits (112), Expect = 4e-08
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H N+V+L G C  +   + I ++M  G+L   L +E    E++    + +A  ++ A+ 
Sbjct: 67  KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAME 125

Query: 61  YLHHHCTPSIIYRDI 75
           YL      + I+RD+
Sbjct: 126 YLEKK---NFIHRDL 137

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 46.7 bits (111), Expect = 5e-08
 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H N+V+L G C  +   + I ++M  G+L   L +E    E++    + +A  ++ A+ 
Sbjct: 274 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAME 332

Query: 61  YLHHHCTPSIIYRDI 75
           YL      + I+R++
Sbjct: 333 YLEKK---NFIHRNL 344

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 46.1 bits (110), Expect = 8e-08
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 16/87 (18%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNN-----------V 49
           QH+NIV L G C H   +  I +Y   G L   L +++  LE +               +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167

Query: 50  NIAKCVAHALSYL-HHHCTPSIIYRDI 75
           + +  VA  +++L   +C    I+RD+
Sbjct: 168 HFSSQVAQGMAFLASKNC----IHRDV 190

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 45.8 bits (109), Expect = 1e-07
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NI++L G     K +  + +YME GSL   L K +   +      V + + +A  + 
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMK 161

Query: 61  YLHHHCTPSIIYRDI 75
           YL        ++RD+
Sbjct: 162 YLSDM---GYVHRDL 173

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H  +VK YG C  +  ++ + +Y+  G L   L    + LE +    + +   V   ++
Sbjct: 61  SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL--LEMCYDVCEGMA 118

Query: 61  YLHHHCTPSIIYRDI 75
           +L  H     I+RD+
Sbjct: 119 FLESH---QFIHRDL 130

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 45.5 bits (108), Expect = 1e-07
 Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 12/78 (15%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK---ENEALELNWTNNVNIAKCVAH 57
               IV LYG       +    + +E GSL  ++ +     E   L +            
Sbjct: 108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYL------GQALE 161

Query: 58  ALSYLHHHCTPSIIYRDI 75
            L YLH      I++ D+
Sbjct: 162 GLEYLHTRR---ILHGDV 176

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H  +V+LYG CL +  +  + ++ME G L   L  +           + +   V   ++
Sbjct: 61  SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMA 118

Query: 61  YL-HHHCTPSIIYRDI 75
           YL         I+RD+
Sbjct: 119 YLEEACV----IHRDL 130

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 45.4 bits (108), Expect = 2e-07
 Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 12/83 (14%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK-------ENEALELNWTNNVNIAK 53
              ++V+L G     +    I + M RG L   L                + +  + +A 
Sbjct: 86  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145

Query: 54  CVAHALSYLH-HHCTPSIIYRDI 75
            +A  ++YL+ +      ++RD+
Sbjct: 146 EIADGMAYLNANKF----VHRDL 164

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 44.9 bits (107), Expect = 2e-07
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H+ +V+LYG C  ++ +F I +YM  G L   L +     +      + + K V  A+ 
Sbjct: 77  SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAME 134

Query: 61  YL-HHHCTPSIIYRDI 75
           YL         ++RD+
Sbjct: 135 YLESKQF----LHRDL 146

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 44.2 bits (105), Expect = 4e-07
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NI++L G     K M  I +YME G+L   L +++    +     V + + +A  + 
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL--VGMLRGIAAGMK 161

Query: 61  YLHHHCTPSIIYRDI 75
           YL +    + ++RD+
Sbjct: 162 YLANM---NYVHRDL 173

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 44.1 bits (105), Expect = 4e-07
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            + ++ +L G CL    +  I + M  G L   + +  + +       +N    +A  ++
Sbjct: 75  DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMN 131

Query: 61  YLHHHCTPSIIYRDI 75
           YL       +++RD+
Sbjct: 132 YLEDRR---LVHRDL 143

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 44.2 bits (104), Expect = 4e-07
 Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 5/77 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNV--NIAKCVAHA 58
                +K Y   L +     + +    G+L   ++      E      +  + A  + + 
Sbjct: 125 MQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYM 184

Query: 59  LSYLHHHCTPSIIYRDI 75
           +  +H      II+ DI
Sbjct: 185 IEQVHDC---EIIHGDI 198

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 43.9 bits (104), Expect = 5e-07
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 1   QHQNIVKLYGFCLHKK-CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHAL 59
           +H N+V+L G  + +K  ++ + +YM +GSL   L +      L     +  +  V  A+
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAM 302

Query: 60  SYLHHHCTPSIIYRDI 75
            YL  +   + ++RD+
Sbjct: 303 EYLEGN---NFVHRDL 315

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 43.8 bits (104), Expect = 5e-07
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 8/77 (10%)

Query: 1   QHQNIVKLYGFCLHKKCM-FAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHAL 59
            H N++ L G  L  + +   +  YM  G L   +        +   + ++    VA  +
Sbjct: 80  NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVK--DLISFGLQVARGM 137

Query: 60  SYL-HHHCTPSIIYRDI 75
            YL         ++RD+
Sbjct: 138 EYLAEQKF----VHRDL 150

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 43.7 bits (104), Expect = 6e-07
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 1   QHQNIVKLYGFCLHKK-CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHAL 59
           +H N+V+L G  + +K  ++ + +YM +GSL   L +      L     +  +  V  A+
Sbjct: 72  RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAM 130

Query: 60  SYLHHHCTPSIIYRDI 75
            YL  +   + ++RD+
Sbjct: 131 EYLEGN---NFVHRDL 143

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 43.6 bits (103), Expect = 6e-07
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 1   QHQNIVKLYGFCLHKKC-MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHAL 59
            H N++ L G CL  +     +  YM+ G L   +  E     +   + +     VA  +
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGM 205

Query: 60  SYL-HHHCTPSIIYRDI 75
            +L         ++RD+
Sbjct: 206 KFLASKKF----VHRDL 218

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 43.8 bits (104), Expect = 6e-07
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 17/88 (19%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVL------------HKENEALELNWTNN 48
           QHQ+IV+ +G C   + +  +++YM  G L   L             ++     L     
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160

Query: 49  VNIAKCVAHALSYL-HHHCTPSIIYRDI 75
           + +A  VA  + YL   H     ++RD+
Sbjct: 161 LAVASQVAAGMVYLAGLHF----VHRDL 184

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 43.4 bits (103), Expect = 8e-07
 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QHQ +V+LY     ++ ++ I +YME GSL   L K    ++L     +++A  +A  ++
Sbjct: 66  QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMA 123

Query: 61  YLHHHCTPSIIYRDI 75
           ++      + I+RD+
Sbjct: 124 FIEER---NYIHRDL 135

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 43.0 bits (102), Expect = 9e-07
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 18/89 (20%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNN------------ 48
           QH++IVK YG C     +  +++YM+ G L   L        +                 
Sbjct: 75  QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134

Query: 49  -VNIAKCVAHALSYL-HHHCTPSIIYRDI 75
            ++IA  +A  + YL   H     ++RD+
Sbjct: 135 MLHIASQIASGMVYLASQHF----VHRDL 159

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 43.1 bits (102), Expect = 1e-06
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NI++L G     +    + +YME GSL   L   +    +     V + + V   + 
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL--VGMLRGVGAGMR 165

Query: 61  YLHHHCTPSIIYRDI 75
           YL        ++RD+
Sbjct: 166 YLSDL---GYVHRDL 177

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 42.6 bits (101), Expect = 1e-06
 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 1   QHQNIVKLYGFCLHKKC-MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHAL 59
            H N++ L G CL  +     +  YM+ G L   +  E     +   + +     VA  +
Sbjct: 84  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGM 141

Query: 60  SYLH-HHCTPSIIYRDI 75
            YL         ++RD+
Sbjct: 142 KYLASKKF----VHRDL 154

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 42.9 bits (101), Expect = 1e-06
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 13/80 (16%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKY--ME--RG-SLCCVLHKENEALELNWTNNVNIAKCV 55
            H +IV+++ F  H         Y  ME   G SL     K ++  +L     +     +
Sbjct: 137 VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL-----KRSKGQKLPVAEAIAYLLEI 191

Query: 56  AHALSYLHHHCTPSIIYRDI 75
             ALSYLH      ++Y D+
Sbjct: 192 LPALSYLHSI---GLVYNDL 208

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 42.7 bits (101), Expect = 1e-06
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 18/89 (20%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL-------------CCVLHKENEALELNWTN 47
           +H+NI+ L G C     ++ I +Y  +G+L                    N   +L+  +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192

Query: 48  NVNIAKCVAHALSYL-HHHCTPSIIYRDI 75
            V+ A  VA  + YL    C    I+RD+
Sbjct: 193 LVSCAYQVARGMEYLASKKC----IHRDL 217

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 42.6 bits (101), Expect = 1e-06
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 20/91 (21%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL---------------CCVLHKENEALELNW 45
            H NIV L G C        I +Y   G L                     E++ L L+ 
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 46  TNNVNIAKCVAHALSYLH-HHCTPSIIYRDI 75
            + ++ +  VA  +++L   +C    I+RD+
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNC----IHRDL 171

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 42.4 bits (100), Expect = 1e-06
 Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL-----CCVLHKENEALELNWTNNVNIAKCV 55
           +++  +   G   +   ++ IY+YME  S+        +  +N    +       I K V
Sbjct: 101 KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSV 160

Query: 56  AHALSYLHHHCTPSIIYRDI 75
            ++ SY+H+    +I +RD+
Sbjct: 161 LNSFSYIHNEK--NICHRDV 178

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 42.8 bits (101), Expect = 2e-06
 Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH  +VKL+     K+ ++ I ++M +GSL   L K +E  +      ++ +  +A  ++
Sbjct: 241 QHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQIAEGMA 298

Query: 61  YLHHHCTPSIIYRDI 75
           ++      + I+RD+
Sbjct: 299 FIEQR---NYIHRDL 310

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 42.3 bits (100), Expect = 2e-06
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 18/89 (20%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL-------------CCVLHKENEALELNWTN 47
           +H+NI+ L G C     ++ I +Y  +G+L                        ++ + +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204

Query: 48  NVNIAKCVAHALSYL-HHHCTPSIIYRDI 75
            V+    +A  + YL    C    I+RD+
Sbjct: 205 LVSCTYQLARGMEYLASQKC----IHRDL 229

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 42.3 bits (100), Expect = 2e-06
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            + ++ +L G CL    +  I + M  G L   + +  + +       +N    +A  ++
Sbjct: 75  DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQ--YLLNWCVQIAKGMN 131

Query: 61  YLHHHCTPSIIYRDI 75
           YL       +++RD+
Sbjct: 132 YLEDRR---LVHRDL 143

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 42.3 bits (100), Expect = 2e-06
 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 1   QHQNIVKLYGFCLHKKC--MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHA 58
            H+NIVK  G C       +  I +++  GSL   L K    + L     +  A  +   
Sbjct: 81  YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK--QQLKYAVQICKG 138

Query: 59  LSYLH-HHCTPSIIYRDI 75
           + YL         ++RD+
Sbjct: 139 MDYLGSRQY----VHRDL 152

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 18/89 (20%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNN------------ 48
           QH N+V L G     + +  I+ Y   G L   L   +   ++  T++            
Sbjct: 70  QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129

Query: 49  -VNIAKCVAHALSYL-HHHCTPSIIYRDI 75
            V++   +A  + YL  HH     +++D+
Sbjct: 130 FVHLVAQIAAGMEYLSSHHV----VHKDL 154

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 42.3 bits (100), Expect = 2e-06
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 18/89 (20%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL-------------CCVLHKENEALELNWTN 47
           +H+NI+ L G C     ++ I +Y  +G+L                        ++ + +
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158

Query: 48  NVNIAKCVAHALSYL-HHHCTPSIIYRDI 75
            V+    +A  + YL    C    I+RD+
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDL 183

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 42.2 bits (99), Expect = 2e-06
 Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+ +V+LY     ++ ++ + +YM +GSL   L K      L     V++A  +A  ++
Sbjct: 320 RHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMA 377

Query: 61  YLHHHCTPSIIYRDI 75
           Y+      + ++RD+
Sbjct: 378 YVERM---NYVHRDL 389

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 41.9 bits (99), Expect = 3e-06
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            +  IV+L G C   + +  + +    G L   L  + E  E+  +N   +   V+  + 
Sbjct: 68  DNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMK 124

Query: 61  YL-HHHCTPSIIYRDI 75
           YL   +     ++RD+
Sbjct: 125 YLEEKNF----VHRDL 136

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H +IV+L G C     +  + +Y+  GSL   + +   AL       +N    +A  + 
Sbjct: 73  DHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQ--LLLNWGVQIAKGMY 129

Query: 61  YLHHHCTPSIIYRDI 75
           YL  H    +++R++
Sbjct: 130 YLEEH---GMVHRNL 141

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 41.9 bits (99), Expect = 3e-06
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 18/88 (20%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL-------------CCVLHKENEALELNWTN 47
            H NI+ L G C H+  ++   +Y   G+L                    + A  L+   
Sbjct: 84  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143

Query: 48  NVNIAKCVAHALSYL-HHHCTPSIIYRD 74
            ++ A  VA  + YL         I+RD
Sbjct: 144 LLHFAADVARGMDYLSQKQF----IHRD 167

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 41.7 bits (98), Expect = 3e-06
 Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+ +V+LY     ++ ++ + +YM +GSL   L K      L     V++A  +A  ++
Sbjct: 237 RHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMA 294

Query: 61  YLHHHCTPSIIYRDI 75
           Y+      + ++RD+
Sbjct: 295 YVERM---NYVHRDL 306

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 41.4 bits (97), Expect = 3e-06
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NIV      +    ++ +  +M  GS    L   +    +N      I + V  AL 
Sbjct: 84  NHPNIVPYRATFIADNELWVVTSFMAYGS-AKDLICTHFMDGMNELAIAYILQGVLKALD 142

Query: 61  YLHHHCTPSIIYRDI 75
           Y+HH      ++R +
Sbjct: 143 YIHHM---GYVHRSV 154

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 41.2 bits (97), Expect = 5e-06
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 11/78 (14%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIA---KCVAH 57
              ++VK YG       ++ + +Y   GS+  ++   N+ L  +      IA   +    
Sbjct: 82  DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDE-----IATILQSTLK 136

Query: 58  ALSYLHHHCTPSIIYRDI 75
            L YLH       I+RDI
Sbjct: 137 GLEYLHFM---RKIHRDI 151

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 41.2 bits (97), Expect = 5e-06
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 1   QHQNIVKLYGFCLHKKC--MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHA 58
            H++I+K  G C       +  + +Y+  GSL   L +      +     +  A+ +   
Sbjct: 91  YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEG 146

Query: 59  LSYLH-HHCTPSIIYRDI 75
           ++YLH  H     I+RD+
Sbjct: 147 MAYLHAQHY----IHRDL 160

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 41.1 bits (97), Expect = 5e-06
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 1   QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHA 58
           QH NIVK  G C    ++ +  I +Y+  GSL   L K  E ++      +     +   
Sbjct: 69  QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKG 126

Query: 59  LSYLH-HHCTPSIIYRDI 75
           + YL         I+RD+
Sbjct: 127 MEYLGTKRY----IHRDL 140

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 40.8 bits (96), Expect = 6e-06
 Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 14/85 (16%)

Query: 1   QHQNIVKLYGFCL------HKKCMFAIYKYMERGSLCCVLHK---ENEALELNWTNNVNI 51
            H ++ KL G  L             I  +M+ G L   L           L     V  
Sbjct: 83  DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142

Query: 52  AKCVAHALSYL-HHHCTPSIIYRDI 75
              +A  + YL   +     I+RD+
Sbjct: 143 MVDIACGMEYLSSRNF----IHRDL 163

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 40.8 bits (96), Expect = 7e-06
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 1   QHQNIVKLYGFCLHKKC--MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHA 58
           QH NIVK  G C       +  I +Y+  GSL   L K  E ++      +     +   
Sbjct: 100 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI--KLLQYTSQICKG 157

Query: 59  LSYLH-HHCTPSIIYRDI 75
           + YL         I+RD+
Sbjct: 158 MEYLGTKRY----IHRDL 171

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 40.4 bits (95), Expect = 7e-06
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           ++ NIV      L    ++ + +Y+  GSL  V+ +      ++      + +    AL 
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALE 130

Query: 61  YLHHHCTPSIIYRDI 75
           +LH +    +I+RDI
Sbjct: 131 FLHSN---QVIHRDI 142

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 40.4 bits (95), Expect = 9e-06
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 11/78 (14%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIA---KCVAH 57
            H  IVKL G   H   ++ + ++   G++  ++ + +  L         I    + +  
Sbjct: 74  DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ-----IQVVCRQMLE 128

Query: 58  ALSYLHHHCTPSIIYRDI 75
           AL++LH      II+RD+
Sbjct: 129 ALNFLHSK---RIIHRDL 143

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 40.3 bits (95), Expect = 9e-06
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H+N+++LYG  L    M  + +    GSL   L K      L        A  VA  + 
Sbjct: 79  DHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMG 135

Query: 61  YLHHHCTPSIIYRDI 75
           YL        I+RD+
Sbjct: 136 YLESK---RFIHRDL 147

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 40.3 bits (95), Expect = 9e-06
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H +IVKL G    ++  + I +    G L   L +   +L++     V  +  +  A++
Sbjct: 71  DHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMA 127

Query: 61  YL-HHHCTPSIIYRDI 75
           YL   +C    ++RDI
Sbjct: 128 YLESINC----VHRDI 139

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 40.3 bits (95), Expect = 1e-05
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H +IVKL G    +  ++ I +    G L   L     +L+L   + +  A  ++ AL+
Sbjct: 74  DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLSTALA 130

Query: 61  YLHHHCTPSIIYRDI 75
           YL        ++RDI
Sbjct: 131 YLESK---RFVHRDI 142

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 19/90 (21%)

Query: 1   QHQNIVKLYGFCLHKKC-MFAIYKYMERGSLCCVLHKENEALELNWTNN----------- 48
            H N+V L G C      +  I ++ + G+L   L  +                      
Sbjct: 89  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148

Query: 49  --VNIAKCVAHALSYL-HHHCTPSIIYRDI 75
             +  +  VA  + +L    C    I+RD+
Sbjct: 149 HLICYSFQVAKGMEFLASRKC----IHRDL 174

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 7/75 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH N+V++Y   L  + ++ + ++++ G+L  ++ +    + LN      + + V  AL+
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALA 155

Query: 61  YLHHHCTPSIIYRDI 75
           YLH      +I+RDI
Sbjct: 156 YLHAQ---GVIHRDI 167

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 40.0 bits (94), Expect = 1e-05
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 13/84 (15%)

Query: 1   QHQNIVKLYGFCL-----HKKCMFAIYKYMERGSLCCVLHK---ENEALELNWTNNVNIA 52
            H N+++L G C+            I  +M+ G L   L     E     +     +   
Sbjct: 94  SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153

Query: 53  KCVAHALSYL-HHHCTPSIIYRDI 75
             +A  + YL + +     ++RD+
Sbjct: 154 VDIALGMEYLSNRNF----LHRDL 173

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 39.6 bits (93), Expect = 1e-05
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 26/97 (26%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNN------------ 48
            + NIVKL G C   K M  +++YM  G L   L   +     + +++            
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167

Query: 49  ---------VNIAKCVAHALSYLH-HHCTPSIIYRDI 75
                    + IA+ VA  ++YL         ++RD+
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERKF----VHRDL 200

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-----EALELNWTNNVNIAKCV 55
           +H NIV+          ++ +  Y E G L   ++ +      E   L+W         +
Sbjct: 81  KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ------I 134

Query: 56  AHALSYLHHHCTPSIIYRDI 75
             AL ++H      I++RDI
Sbjct: 135 CLALKHVHDR---KILHRDI 151

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 39.5 bits (92), Expect = 2e-05
 Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            +  IV+L G C   + +  + +    G L   L  + E  E+  +N   +   V+  + 
Sbjct: 394 DNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMK 450

Query: 61  YLHHHCTPSIIYRDI 75
           YL      + ++R++
Sbjct: 451 YLEEK---NFVHRNL 462

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL 30
            H+NIV L G C     ++ I++Y   G L
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDL 136

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 9/78 (11%)

Query: 1   QHQNIVKLYGFCLHKKC--MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHA 58
               IVK  G         +  + +Y+  G L   L +    L+ +    +  +  +   
Sbjct: 82  HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS--RLLLYSSQICKG 139

Query: 59  LSYLH-HHCTPSIIYRDI 75
           + YL    C    ++RD+
Sbjct: 140 MEYLGSRRC----VHRDL 153

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 26/97 (26%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSL---------------------CCVLHKENE 39
            H +++KLYG C     +  I +Y + GSL                             +
Sbjct: 84  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143

Query: 40  ALELNWTNNVNIAKCVAHALSYL-HHHCTPSIIYRDI 75
              L   + ++ A  ++  + YL         ++RD+
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKL----VHRDL 176

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 38.8 bits (91), Expect = 3e-05
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 9/76 (11%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            +  IV++ G C   +    + +  E G L   L +      +   N + +   V+  + 
Sbjct: 76  DNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMK 131

Query: 61  YL-HHHCTPSIIYRDI 75
           YL   +     ++RD+
Sbjct: 132 YLEESNF----VHRDL 143

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 38.8 bits (91), Expect = 3e-05
 Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 14/79 (17%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYME--RGSLCCVLHKENEALELN--WTNNVNIAKCVA 56
           QH   V+L         +   Y   E    SL         +L     W       +   
Sbjct: 115 QHPCCVRLEQAWEEGGIL---YLQTELCGPSLQQHCEAWGASLPEAQVW----GYLRDTL 167

Query: 57  HALSYLHHHCTPSIIYRDI 75
            AL++LH      +++ D+
Sbjct: 168 LALAHLHSQ---GLVHLDV 183

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 38.8 bits (91), Expect = 3e-05
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNV-NIAKCVAHAL 59
           QH ++V+ +        M    +Y   GSL   + +    +       + ++   V   L
Sbjct: 69  QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128

Query: 60  SYLHHHCTPSIIYRDI 75
            Y+H     S+++ DI
Sbjct: 129 RYIHSM---SLVHMDI 141

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 38.7 bits (90), Expect = 3e-05
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 9/77 (11%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNV--NIAKCVAHA 58
               IV  YG       +    ++M+ GSL  VL K     E      +   ++  V   
Sbjct: 89  NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKG 143

Query: 59  LSYLHHHCTPSIIYRDI 75
           L+YL       I++RD+
Sbjct: 144 LTYLREKH--KIMHRDV 158

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 38.7 bits (90), Expect = 3e-05
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H +IVKL G    +  ++ I +    G L   L     +L+L   + +  A  ++ AL+
Sbjct: 449 DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALA 505

Query: 61  YLH-HHCTPSIIYRDI 75
           YL         ++RDI
Sbjct: 506 YLESKRF----VHRDI 517

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 38.5 bits (90), Expect = 4e-05
 Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 5/77 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNV--NIAKCVAHA 58
               IV+ YG    +   +   + M   S           L+      +   I      A
Sbjct: 79  DCPYIVQFYGALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKA 137

Query: 59  LSYLHHHCTPSIIYRDI 75
           L++L  +    II+RDI
Sbjct: 138 LNHLKENL--KIIHRDI 152

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 38.5 bits (90), Expect = 4e-05
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 10/81 (12%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVN------IAKC 54
            H NIV  Y   + K  ++ + K +  GS+  ++ K   A   + +  ++      I + 
Sbjct: 71  HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII-KHIVAKGEHKSGVLDESTIATILRE 129

Query: 55  VAHALSYLHHHCTPSIIYRDI 75
           V   L YLH +     I+RD+
Sbjct: 130 VLEGLEYLHKN---GQIHRDV 147

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 38.0 bits (89), Expect = 6e-05
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 16/80 (20%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK-----ENEALELNWTNNVNIAKCV 55
           +H NI++LYG+      ++ I +Y   G++   L K     E                 +
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT--------ATYITEL 118

Query: 56  AHALSYLHHHCTPSIIYRDI 75
           A+ALSY H      +I+RDI
Sbjct: 119 ANALSYCHSK---RVIHRDI 135

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 37.8 bits (88), Expect = 8e-05
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 12/78 (15%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIA---KCVAH 57
           +H N ++  G  L +   + + +Y   GS   +L    + L+        IA        
Sbjct: 112 RHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVE-----IAAVTHGALQ 165

Query: 58  ALSYLHHHCTPSIIYRDI 75
            L+YLH H   ++I+RD+
Sbjct: 166 GLAYLHSH---NMIHRDV 180

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 37.0 bits (86), Expect = 1e-04
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 1   QHQNIVKLYGF--CLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHA 58
            H+NIVKL+        +    I ++   GSL  VL + + A  L  +  + + + V   
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 59  LSYLHHHCTPSIIYRDI 75
           +++L  +    I++R+I
Sbjct: 125 MNHLREN---GIVHRNI 138

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
               + K YG  L    ++ I +Y+  GS   +L        L+ T    I + +   L 
Sbjct: 78  DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLD 133

Query: 61  YLHHHCTPSIIYRDI 75
           YLH       I+RDI
Sbjct: 134 YLHSE---KKIHRDI 145

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 16/80 (20%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK-----ENEALELNWTNNVNIAKCV 55
           +H NI+++Y +   +K ++ + ++  RG L   L K     E  +            + +
Sbjct: 72  RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS--------ATFMEEL 123

Query: 56  AHALSYLHHHCTPSIIYRDI 75
           A AL Y H      +I+RDI
Sbjct: 124 ADALHYCHER---KVIHRDI 140

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 37.1 bits (86), Expect = 1e-04
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 2   HQNIVKLYGF--CLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHAL 59
           H+NIVKL+        +    I ++   GSL  VL + + A  L  +  + + + V   +
Sbjct: 66  HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125

Query: 60  SYLHHHCTPSIIYRDI 75
           ++L  +    I++R+I
Sbjct: 126 NHLREN---GIVHRNI 138

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYK------------YMERGSLCCVLHKENEALELNWTNN 48
           +H  IV+ +   L K     +                 + +L   ++      E   +  
Sbjct: 61  EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120

Query: 49  VNIAKCVAHALSYLHHHCTPSIIYRDI 75
           ++I   +A A+ +LH      +++RD+
Sbjct: 121 LHIFLQIAEAVEFLHSK---GLMHRDL 144

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 16/82 (19%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVL--HKEN-----EALELNWTNNVNIAK 53
            H N++K Y   +    +  + +  + G L  ++   K+      E     +        
Sbjct: 90  NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ----- 144

Query: 54  CVAHALSYLHHHCTPSIIYRDI 75
            +  AL ++H      +++RDI
Sbjct: 145 -LCSALEHMHSR---RVMHRDI 162

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 36.4 bits (84), Expect = 2e-04
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)

Query: 1   QHQNIVKLYGFCLHKKC-MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIA 52
            H N+V L G C      +  I ++ + G+L   L  +        T      
Sbjct: 84  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFR 136

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 35.7 bits (83), Expect = 4e-04
 Identities = 15/76 (19%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLC-CVLHKENEALELNWTNNVNIAKCVAHAL 59
           +H +IV+L         ++ ++++M+   LC  ++ + +     +     +  + +  AL
Sbjct: 84  KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143

Query: 60  SYLHHHCTPSIIYRDI 75
            Y H +   +II+RD+
Sbjct: 144 RYCHDN---NIIHRDV 156

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 35.8 bits (83), Expect = 4e-04
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 18/85 (21%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYK------YMERGSLCCVLHK-ENEALELNWTNNVNIA- 52
            H+NI   YG  + K       +      +   GS+  ++   +   L+  W     IA 
Sbjct: 79  HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW-----IAY 133

Query: 53  --KCVAHALSYLHHHCTPSIIYRDI 75
             + +   LS+LH H    +I+RDI
Sbjct: 134 ICREILRGLSHLHQH---KVIHRDI 155

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
               IV+ +G  +    +F   + M       +  +    +         +   +  AL 
Sbjct: 82  DCPYIVQCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIPERILGK--MTVAIVKALY 138

Query: 61  YLHHHCTPSIIYRDI 75
           YL       +I+RD+
Sbjct: 139 YLKE--KHGVIHRDV 151

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	75
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.87
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.87
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.86
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.86
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.86
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.85
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.85
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.85
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.85
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.84
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.84
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.82
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.81
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.81
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.8
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.79
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.79
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.77
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.73
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.72
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.71
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.71
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.71
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.7
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.7
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.7
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.7
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.7
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.7
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.69
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.69
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.69
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.69
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.69
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.69
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.69
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.69
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.69
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.69
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.68
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.68
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.68
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.68
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.68
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.68
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.68
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.68
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.68
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.68
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.68
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.68
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.67
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.67
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.67
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.67
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.67
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.67
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.67
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.66
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.66
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.66
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.66
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.66
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.65
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.65
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.65
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.65
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.65
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.65
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.65
3uqc_A	286	Probable conserved transmembrane protein; structur	99.65
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.65
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.65
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.64
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.64
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.64
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.64
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.64
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.64
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.64
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.64
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.64
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.64
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.64
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.63
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.63
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.63
3bhy_A	283	Death-associated protein kinase 3; death associate	99.63
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.63
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.63
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.63
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.63
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.63
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.63
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.62
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.62
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.62
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.62
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.62
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.62
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.62
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.62
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.62
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.62
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.62
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.61
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.61
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.61
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.61
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.61
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.61
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.61
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.61
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.61
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.61
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.61
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.61
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.61
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.6
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.6
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.6
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.6
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.6
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.6
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.6
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.6
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.6
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.6
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.59
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.59
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.59
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.59
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.59
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.59
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.59
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.59
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.59
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.59
3niz_A	311	Rhodanese family protein; structural genomics, str	99.58
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.58
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.58
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.58
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.58
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.58
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.58
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.58
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.58
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.58
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.58
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.58
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.58
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.58
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.58
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.58
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.58
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.58
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.58
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.57
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.57
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.57
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.57
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.57
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.57
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.57
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.57
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.56
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.56
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.56
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.56
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.56
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.56
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.56
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.56
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.55
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.55
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.55
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.55
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.55
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.55
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.55
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.55
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.54
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.54
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.54
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.54
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.54
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.54
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.54
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.53
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.53
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.53
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.53
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.53
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.53
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.53
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.52
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.52
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.52
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.52
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.52
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.52
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.51
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.51
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.51
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.5
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.5
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.5
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.5
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.5
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.49
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.49
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.48
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.48
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.48
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.48
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.48
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.47
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.47
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.46
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.46
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.46
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.45
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.45
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.45
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.45
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.44
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.44
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.43
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.43
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.42
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.42
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.41
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.4
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.4
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.4
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.4
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.4
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.39
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.38
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.38
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.37
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.37
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.36
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.36
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.34
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.34
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.33
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.33
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.31
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.31
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.31
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.77
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.41
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.3
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.26
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.72
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.64
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	95.8
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	91.6

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.87  E-value=7.8e-22  Score=102.93  Aligned_cols=69  Identities=23%  Similarity=0.297  Sum_probs=64.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++.++++|||+++|+|.+++...+.   +++..+..++.|++.|+.|+|.+   +|+||||
T Consensus       108 ~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDl  176 (336)
T 4g3f_A          108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC---LPEDRALYYLGQALEGLEYLHTR---RILHGDV  176 (336)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTT---TEECSCC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---Cceeccc
Confidence            599999999999999999999999999999999976544   89999999999999999999999   9999997

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.87  E-value=1.1e-21  Score=101.53  Aligned_cols=69  Identities=28%  Similarity=0.338  Sum_probs=65.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++.++++|||+++|+|.+++.+.+.   +++..+..++.|++.|+.|+|++   +|+||||
T Consensus        90 ~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~---l~e~~~~~~~~qi~~al~ylH~~---~IiHRDl  158 (311)
T 4aw0_A           90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHGK---GIIHRDL  158 (311)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCccCCC
Confidence            599999999999999999999999999999999987544   89999999999999999999999   9999997

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.86  E-value=1.6e-21  Score=100.48  Aligned_cols=72  Identities=31%  Similarity=0.612  Sum_probs=64.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC----------CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCe
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN----------EALELNWTNNVNIAKCVAHALSYLHHHCTPSI   70 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i   70 (75)
                      +||||++++++|.+++..++++||+++|+|.+++...+          ....+++.....++.|++.|+.|||++   +|
T Consensus        73 ~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~i  149 (299)
T 4asz_A           73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HF  149 (299)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred             CCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence            59999999999999999999999999999999997532          122488999999999999999999999   99


Q ss_pred             EeccC
Q 039179           71 IYRDI   75 (75)
Q Consensus        71 ~hrdl   75 (75)
                      +||||
T Consensus       150 iHRDl  154 (299)
T 4asz_A          150 VHRDL  154 (299)
T ss_dssp             CCSCC
T ss_pred             ccCcc
Confidence            99997

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.86  E-value=3.7e-21  Score=100.81  Aligned_cols=71  Identities=21%  Similarity=0.311  Sum_probs=64.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++.++++|||+++|+|.+++..... ..+++..+..++.|++.|+.|+|++   +|+||||
T Consensus        81 ~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~-~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDl  151 (350)
T 4b9d_A           81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKG-VLFQEDQILDWFVQICLALKHVHDR---KILHRDI  151 (350)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccC
Confidence            599999999999999999999999999999999975432 2267888999999999999999999   9999997

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.86  E-value=1.9e-21  Score=100.36  Aligned_cols=69  Identities=30%  Similarity=0.330  Sum_probs=64.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+++|+|.+++.+.+.   +++..+..++.|++.|+.|+|++   +|+||||
T Consensus        84 ~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDl  152 (304)
T 3ubd_A           84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLHSL---GIIYRDL  152 (304)
T ss_dssp             CCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSSC
T ss_pred             CCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCC
Confidence            599999999999999999999999999999999987554   89999999999999999999999   9999997

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.85  E-value=4.7e-21  Score=100.30  Aligned_cols=68  Identities=29%  Similarity=0.513  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++.++++|||+++|+|..++... .   +++..+..++.|++.|+.|+|++   +|+||||
T Consensus       129 ~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~-~---l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDl  196 (346)
T 4fih_A          129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-R---MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDI  196 (346)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHS-C---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcC-C---CCHHHHHHHHHHHHHHHHHHHHC---CcccccC
Confidence            5999999999999999999999999999999988652 2   89999999999999999999999   9999997

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.85  E-value=6.3e-21  Score=99.33  Aligned_cols=72  Identities=28%  Similarity=0.527  Sum_probs=64.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC------------cccCCHHhHHHHHHHHHHHhhHhhhCCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE------------ALELNWTNNVNIAKCVAHALSYLHHHCTP   68 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~   68 (75)
                      +||||++++++|.+++..++++||+++|+|.+++.....            ...+++.....++.|++.|+.|||..   
T Consensus       101 ~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---  177 (329)
T 4aoj_A          101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---  177 (329)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---
Confidence            599999999999999999999999999999999875321            12378889999999999999999999   


Q ss_pred             CeEeccC
Q 039179           69 SIIYRDI   75 (75)
Q Consensus        69 ~i~hrdl   75 (75)
                      +|+||||
T Consensus       178 ~iiHRDL  184 (329)
T 4aoj_A          178 HFVHRDL  184 (329)
T ss_dssp             TCCCSCC
T ss_pred             Ceecccc
Confidence            9999997

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.85  E-value=7.3e-21  Score=101.64  Aligned_cols=68  Identities=29%  Similarity=0.513  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++.+|++||||.+|+|.+++... .   +++..+..++.|++.|+.|||.+   +|+||||
T Consensus       206 ~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~-~---l~e~~~~~~~~qil~aL~ylH~~---~IiHRDi  273 (423)
T 4fie_A          206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-R---MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDI  273 (423)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHS-C---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhcc-C---CCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence            5999999999999999999999999999999988653 2   89999999999999999999999   9999997

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.85  E-value=7.1e-21  Score=98.43  Aligned_cols=72  Identities=25%  Similarity=0.419  Sum_probs=63.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +||||++++++|.+++..++++||+++|+|.+++.....             ...+++.....++.|++.||.|||+.  
T Consensus        87 ~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~--  164 (308)
T 4gt4_A           87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH--  164 (308)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            599999999999999999999999999999999964221             12378889999999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++||||
T Consensus       165 -~iiHRDL  171 (308)
T 4gt4_A          165 -HVVHKDL  171 (308)
T ss_dssp             -TCCCSCC
T ss_pred             -CCCCCCc
Confidence             9999997

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.84  E-value=1.7e-20  Score=96.97  Aligned_cols=69  Identities=28%  Similarity=0.476  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.. +..++++||+++|+|.+++.....  .+++..+..++.|++.|+.|||+.   +|+||||
T Consensus        90 ~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~~~~--~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDl  158 (307)
T 3omv_A           90 RHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDM  158 (307)
T ss_dssp             CCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCC
T ss_pred             CCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCcc
Confidence            59999999998764 568999999999999999875432  288999999999999999999999   9999997

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.84  E-value=1.6e-20  Score=96.48  Aligned_cols=69  Identities=29%  Similarity=0.474  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCC--eEecc
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPS--IIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~--i~hrd   74 (75)
                      +||||+++++++.+    +..++++|||+++|+|..++.+...   +++..+..++.|++.|+.|+|++   +  |+|||
T Consensus        83 ~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRD  156 (290)
T 3fpq_A           83 QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLHTR---TPPIIHRD  156 (290)
T ss_dssp             CCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCC
T ss_pred             CCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCCEEecc
Confidence            59999999999865    3458999999999999999976543   88999999999999999999998   6  99999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       157 l  157 (290)
T 3fpq_A          157 L  157 (290)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.82  E-value=6.6e-20  Score=93.65  Aligned_cols=68  Identities=22%  Similarity=0.417  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+ +|++.+.+...+.   +++..+..++.|++.|+.|+|++   +|+||||
T Consensus        71 ~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~---l~e~~~~~~~~qi~~al~ylH~~---~IiHRDi  138 (275)
T 3hyh_A           71 RHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHRH---KIVHRDL  138 (275)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccccC
Confidence            5999999999999999999999999 6889888876543   89999999999999999999999   9999997

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.81  E-value=1.7e-19  Score=100.58  Aligned_cols=69  Identities=19%  Similarity=0.180  Sum_probs=65.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++.++++|||+++|+|..++...+.   +++..+..++.|++.|+.|||.+   +|+||||
T Consensus       250 ~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~---l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDL  318 (689)
T 3v5w_A          250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEIILGLEHMHNR---FVVYRDL  318 (689)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHTT---TEECCCC
T ss_pred             CCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            589999999999999999999999999999999987554   89999999999999999999999   9999997

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.81  E-value=2.3e-19  Score=92.48  Aligned_cols=72  Identities=19%  Similarity=0.325  Sum_probs=60.2

Q ss_pred             CCCceeeEeeEEeeCC------------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCC
Q 039179            1 QHQNIVKLYGFCLHKK------------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTP   68 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~   68 (75)
                      +||||+++++++...+            .++++|||+.+|++.+++.............+..++.|++.|+.|+|++   
T Consensus        61 ~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---  137 (299)
T 4g31_A           61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---  137 (299)
T ss_dssp             CCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---
Confidence            5999999999987644            3689999999999999997654322244556788999999999999999   


Q ss_pred             CeEeccC
Q 039179           69 SIIYRDI   75 (75)
Q Consensus        69 ~i~hrdl   75 (75)
                      +|+||||
T Consensus       138 ~IiHRDl  144 (299)
T 4g31_A          138 GLMHRDL  144 (299)
T ss_dssp             TCCCCCC
T ss_pred             cCccccC
Confidence            9999997

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.80  E-value=5.5e-19  Score=91.19  Aligned_cols=71  Identities=25%  Similarity=0.382  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhC-----CCCCeE
Q 039179            1 QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHH-----CTPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-----~~~~i~   71 (75)
                      +||||+++++++..++    .+++++||+++|+|.+++....    +++.....++.+++.|+.|+|.+     ..++|+
T Consensus        55 ~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~Ii  130 (303)
T 3hmm_A           55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA  130 (303)
T ss_dssp             CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEE
T ss_pred             CCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEe
Confidence            5999999999998654    5799999999999999997532    88888999999999999999975     244899


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      ||||
T Consensus       131 HRDl  134 (303)
T 3hmm_A          131 HRDL  134 (303)
T ss_dssp             CSCC
T ss_pred             eccC
Confidence            9997

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.79  E-value=3.3e-19  Score=93.63  Aligned_cols=71  Identities=24%  Similarity=0.372  Sum_probs=60.8

Q ss_pred             CCceeeEeeEEeeC-CeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            2 HQNIVKLYGFCLHK-KCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         2 h~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      ||||++++++|..+ +.+++++|||++|+|.++++....             ...+++..+..++.|++.||.|+|++  
T Consensus       127 hpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~--  204 (353)
T 4ase_A          127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--  204 (353)
T ss_dssp             CTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC--
Confidence            58999999999765 568999999999999999975321             12367888999999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +|+||||
T Consensus       205 -~iiHRDL  211 (353)
T 4ase_A          205 -KCIHRDL  211 (353)
T ss_dssp             -TCCCSCC
T ss_pred             -CeecCcc
Confidence             9999997

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.79  E-value=1.2e-18  Score=95.88  Aligned_cols=70  Identities=21%  Similarity=0.360  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++..++++|||+.+|+|..++.....  .+++..+..++.|++.|+.|||.+   +|+||||
T Consensus       212 ~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDl  281 (573)
T 3uto_A          212 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDL  281 (573)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTS--CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccC
Confidence            599999999999999999999999999999998865322  288999999999999999999999   9999997

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.77  E-value=2.5e-18  Score=90.52  Aligned_cols=66  Identities=18%  Similarity=0.282  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++.+++++||+++|++.+.+..      +++..+..++.|++.|+.|+|++   +|+||||
T Consensus        78 ~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~~------l~~~~~~~~~~qll~al~ylH~~---gIiHRDi  143 (361)
T 4f9c_A           78 GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS------LSFQEVREYMLNLFKALKRIHQF---GIVHRDV  143 (361)
T ss_dssp             SBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHTT------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHcC------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcC
Confidence            489999999999999999999999999999998842      88889999999999999999999   9999997

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.73  E-value=2.2e-17  Score=90.89  Aligned_cols=66  Identities=11%  Similarity=0.129  Sum_probs=58.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .|+||+++++++.+++..|++|||+++++|.+.+...+.   ++..   .++.|++.|+.|+|.+   +|+||||
T Consensus       300 ~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~---l~~~---~I~~QIl~AL~ylH~~---GIIHRDI  365 (569)
T 4azs_A          300 AGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEE---IDRE---KILGSLLRSLAALEKQ---GFWHDDV  365 (569)
T ss_dssp             TTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCC---CCHH---HHHHHHHHHHHHHHHT---TCEESCC
T ss_pred             CCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCC---CCHH---HHHHHHHHHHHHHHHC---CceeccC
Confidence            489999999999999999999999999999999986543   5543   4788999999999999   9999997

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.72  E-value=2.5e-17  Score=87.64  Aligned_cols=68  Identities=22%  Similarity=0.415  Sum_probs=59.6

Q ss_pred             CCCceeeEeeEEeeC------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +||||+++++++...      +.++++|||+. |++...+...+.   +++..+..++.|++.|+.|+|++   +|+|||
T Consensus       111 ~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~---l~~~~~~~~~~qil~al~ylH~~---~iiHRD  183 (398)
T 4b99_A          111 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHSA---QVIHRD  183 (398)
T ss_dssp             CCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSC---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCC
T ss_pred             CCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---cCcCCC
Confidence            599999999987643      57899999996 678888876443   89999999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       184 l  184 (398)
T 4b99_A          184 L  184 (398)
T ss_dssp             C
T ss_pred             c
Confidence            7

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.71  E-value=1.6e-16  Score=83.09  Aligned_cols=69  Identities=20%  Similarity=0.373  Sum_probs=63.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++.+|++...+.....   +++..+..++.+++.|+.|+|..   +++||||
T Consensus        74 ~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~---~~~~~~~~~~~qi~~al~~lH~~---givHrDl  142 (342)
T 2qr7_A           74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHAQ---GVVHRDL  142 (342)
T ss_dssp             TSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTT---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcEeccC
Confidence            499999999999999999999999999999998876443   88999999999999999999999   9999997

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.71  E-value=9.6e-17  Score=84.22  Aligned_cols=69  Identities=23%  Similarity=0.426  Sum_probs=63.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+.+|++...+.....   +++..+..++.+++.|+.|||..   +++||||
T Consensus        82 ~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---givHrDl  150 (353)
T 3txo_A           82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR---FDEARARFYAAEIISALMFLHDK---GIIYRDL  150 (353)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCcccCC
Confidence            489999999999999999999999999999999876543   88999999999999999999999   9999997

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.71  E-value=2e-16  Score=83.22  Aligned_cols=69  Identities=22%  Similarity=0.326  Sum_probs=63.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++++|++..++.....   +++..+..++.|++.|+.|||..   +++||||
T Consensus        73 ~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~---givHrDl  141 (361)
T 2yab_A           73 LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK---KIAHFDL  141 (361)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSC---CBHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            489999999999999999999999999999999875433   88999999999999999999999   9999997

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.70  E-value=1.7e-16  Score=82.29  Aligned_cols=69  Identities=33%  Similarity=0.539  Sum_probs=63.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+....++++||+.+|++..++.....   ++...+..++.+++.|+.|||..   +++||||
T Consensus        64 ~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDl  132 (318)
T 1fot_A           64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR---FPNPVAKFYAAEVCLALEYLHSK---DIIYRDL  132 (318)
T ss_dssp             CBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSS---CCHHHHHHHHHHHHHHHHHHHTT---TEECCCC
T ss_pred             CCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            589999999999999999999999999999999976443   88889999999999999999999   9999997

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.70  E-value=1.2e-16  Score=85.01  Aligned_cols=69  Identities=26%  Similarity=0.447  Sum_probs=63.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++||+.+|++...+.....   +++..+..++.+++.|+.|||..   +|+||||
T Consensus       111 ~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~---givHrDL  179 (396)
T 4dc2_A          111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHER---GIIYRDL  179 (396)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEEeccC
Confidence            599999999999999999999999999999998876443   88999999999999999999999   9999997

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.70  E-value=1.3e-16  Score=83.54  Aligned_cols=69  Identities=20%  Similarity=0.450  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+.+|++..++.....   ++...+..++.+++.|+.|||..   +++||||
T Consensus        76 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDl  144 (345)
T 1xjd_A           76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSK---GIVYRDL  144 (345)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCC
Confidence            599999999999999999999999999999999876443   88899999999999999999999   9999997

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.70  E-value=2.6e-16  Score=83.09  Aligned_cols=71  Identities=23%  Similarity=0.296  Sum_probs=64.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++.+|++..++..... ..++...+..++.|++.|+.|||..   +++||||
T Consensus        84 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDl  154 (389)
T 3gni_B           84 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSV  154 (389)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            599999999999999999999999999999999876422 2288889999999999999999999   9999997

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.70  E-value=2.3e-16  Score=81.89  Aligned_cols=69  Identities=25%  Similarity=0.360  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++.+|++...+.....   +++..+..++.+++.|+.|||..   +++||||
T Consensus        64 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl  132 (325)
T 3kn6_A           64 GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH---FSETEASYIMRKLVSAVSHMHDV---GVVHRDL  132 (325)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCeecCC
Confidence            499999999999999999999999999999999876443   88999999999999999999999   9999996

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=3.5e-16  Score=81.12  Aligned_cols=70  Identities=26%  Similarity=0.312  Sum_probs=63.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+.+..++++|+++++++...+.....  .+++..+..++.|++.|+.|+|..   +++||||
T Consensus        59 ~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---givH~Dl  128 (321)
T 1tki_A           59 RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSH---NIGHFDI  128 (321)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence            599999999999999999999999999999999865332  288899999999999999999999   9999996

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.69  E-value=4e-16  Score=80.26  Aligned_cols=70  Identities=30%  Similarity=0.592  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++|++.++++..++.....  .+++.....++.+++.|+.|+|+.   +++|||+
T Consensus        65 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dl  134 (310)
T 3s95_A           65 EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDL  134 (310)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCT--TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCC
Confidence            599999999999999999999999999999999976332  288889999999999999999999   9999996

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.69  E-value=1.7e-16  Score=82.56  Aligned_cols=69  Identities=25%  Similarity=0.419  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++|++++|++..++...+.   ++...+..++.|++.|+.|+|..   +++||||
T Consensus        72 ~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH~~---~ivHrDl  140 (328)
T 3fe3_A           72 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQK---RIVHRDL  140 (328)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEeccCC
Confidence            599999999999999999999999999999999876544   88899999999999999999999   9999997

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.69  E-value=3.1e-16  Score=84.28  Aligned_cols=70  Identities=19%  Similarity=0.183  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+.+|++..++.....  .+++..+..++.+++.|+.|+|..   +|+||||
T Consensus       132 ~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~--~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDL  201 (437)
T 4aw2_A          132 DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED--RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDI  201 (437)
T ss_dssp             CTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccc
Confidence            589999999999999999999999999999999976322  288999999999999999999999   9999997

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.69  E-value=1.7e-16  Score=83.04  Aligned_cols=69  Identities=26%  Similarity=0.447  Sum_probs=63.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++||+.+|++...+.....   ++...+..++.+++.|+.|||..   +++||||
T Consensus        68 ~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDl  136 (345)
T 3a8x_A           68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHER---GIIYRDL  136 (345)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CceecCC
Confidence            489999999999999999999999999999999876443   88999999999999999999999   9999997

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.69  E-value=2e-16  Score=83.60  Aligned_cols=69  Identities=28%  Similarity=0.374  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+.+|++...+.....   +....+..++.+++.|+.|||..   +++||||
T Consensus        97 ~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---givHrDl  165 (373)
T 2r5t_A           97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC---FLEPRARFYAAEIASALGYLHSL---NIVYRDL  165 (373)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CceecCC
Confidence            589999999999999999999999999999999876443   78888899999999999999999   9999997

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.69  E-value=4.2e-16  Score=80.02  Aligned_cols=68  Identities=25%  Similarity=0.418  Sum_probs=62.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++|++.+|++..++....    ++...+..++.+++.|+.|+|..   +++|||+
T Consensus        75 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dl  142 (297)
T 3fxz_A           75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSN---QVIHRDI  142 (297)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhC---CceeCCC
Confidence            59999999999999999999999999999999987532    78889999999999999999999   9999996

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.69  E-value=2.4e-16  Score=82.30  Aligned_cols=69  Identities=23%  Similarity=0.340  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+.+..++++||+++|++...+.....   ++...+..++.+++.|+.|||..   +++||||
T Consensus        63 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDl  131 (337)
T 1o6l_A           63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHSR---DVVYRDI  131 (337)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeecCcC
Confidence            589999999999999999999999999999998876443   88889999999999999999999   9999997

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.69  E-value=4.7e-16  Score=80.70  Aligned_cols=69  Identities=23%  Similarity=0.317  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+...++++|++.++++..++.....   ++...+..++.+++.|+.|||..   +++||||
T Consensus        72 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dl  140 (326)
T 2y0a_A           72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSL---QIAHFDL  140 (326)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSC---CBHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHHC---CeEcCCC
Confidence            599999999999999999999999999999999865433   88999999999999999999999   9999996

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.69  E-value=2e-16  Score=84.48  Aligned_cols=68  Identities=19%  Similarity=0.286  Sum_probs=62.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++||+++|++..++... .   ++...+..++.+++.|+.|||..   +|+||||
T Consensus       127 ~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~-~---~~e~~~~~~~~qi~~aL~~LH~~---givHrDL  194 (410)
T 3v8s_A          127 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-D---VPEKWARFYTAEVVLALDAIHSM---GFIHRDV  194 (410)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHC-C---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcC-C---CCHHHHHHHHHHHHHHHHHHHHC---CeEeccC
Confidence            5999999999999999999999999999999988653 2   88889999999999999999999   9999997

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.69  E-value=3.8e-16  Score=81.87  Aligned_cols=69  Identities=20%  Similarity=0.335  Sum_probs=63.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.++...++++||+++|++..++.....   ++...+..++.+++.|+.|||..   +++||||
T Consensus        99 ~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDl  167 (350)
T 1rdq_E           99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHSL---DLIYRDL  167 (350)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccccC
Confidence            589999999999999999999999999999999976543   88899999999999999999999   9999997

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.68  E-value=5e-16  Score=78.79  Aligned_cols=72  Identities=21%  Similarity=0.327  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++|+++++++..++..... ...++...+..++.|++.|+.|+|..   +++||||
T Consensus        69 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Di  141 (289)
T 1x8b_A           69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDI  141 (289)
T ss_dssp             SCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCC
Confidence            589999999999999999999999999999999875311 12278889999999999999999999   9999997

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.68  E-value=3.4e-16  Score=82.98  Aligned_cols=69  Identities=23%  Similarity=0.296  Sum_probs=63.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++.+|++..++.....   ++...+..++.+++.|+.|||..   +++||||
T Consensus        73 ~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~---givHrDl  141 (384)
T 4fr4_A           73 EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH---FKEETVKLFICELVMALDYLQNQ---RIIHRDM  141 (384)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CceeccC
Confidence            599999999999999999999999999999999876433   88999999999999999999999   9999997

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.68  E-value=1.8e-16  Score=83.62  Aligned_cols=70  Identities=26%  Similarity=0.493  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++++|++..++.....  .++......++.+++.|+.|||..   +++||||
T Consensus       170 ~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDl  239 (377)
T 3cbl_A          170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDL  239 (377)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCCccc
Confidence            599999999999998999999999999999999875332  278888999999999999999999   9999997

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.68  E-value=3.8e-16  Score=80.38  Aligned_cols=69  Identities=28%  Similarity=0.494  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++|++.++++..++.....   ++...+..++.|++.|+.|||..   +++||||
T Consensus        69 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dl  137 (316)
T 2ac3_A           69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVVQDVASALDFLHNK---GIAHRDL  137 (316)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHhC---CceeCCC
Confidence            499999999999999999999999999999999876443   88889999999999999999999   9999996

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.68  E-value=4.6e-16  Score=81.80  Aligned_cols=69  Identities=17%  Similarity=0.318  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++|++.+|++...+.....   +++..+..++.+++.|+.|+|..   +++||||
T Consensus        86 ~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dl  154 (362)
T 2bdw_A           86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHSN---GIVHRNL  154 (362)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSC---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeccC
Confidence            599999999999999999999999999999988865433   88889999999999999999999   9999997

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.68  E-value=3.2e-16  Score=82.33  Aligned_cols=69  Identities=22%  Similarity=0.298  Sum_probs=63.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++||+.+|++...+.....   ++...+..++.+++.|+.|+|..   +++||||
T Consensus        74 ~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dl  142 (361)
T 3uc3_A           74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCHSM---QICHRDL  142 (361)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCSCCC
T ss_pred             CCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            599999999999999999999999999999999876443   88999999999999999999999   9999996

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.68  E-value=4.5e-16  Score=83.14  Aligned_cols=70  Identities=19%  Similarity=0.212  Sum_probs=63.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++.+++..++++||+++|++..++...+.  .+++..+..++.+++.|+.|+|..   +++||||
T Consensus       119 ~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDL  188 (412)
T 2vd5_A          119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE--RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDI  188 (412)
T ss_dssp             CTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---Ceeeccc
Confidence            589999999999999999999999999999999976432  288889999999999999999999   9999997

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.68  E-value=3.8e-16  Score=81.99  Aligned_cols=69  Identities=20%  Similarity=0.341  Sum_probs=63.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||+|+++++++.+.+..++++||+++|++..++.....   +++..+..++.+++.|+.|||..   +++||||
T Consensus        79 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---givHrDl  147 (353)
T 2i0e_A           79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDL  147 (353)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CEEeccC
Confidence            489999999999999999999999999999999876443   88999999999999999999999   9999997

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.68  E-value=4e-16  Score=79.96  Aligned_cols=69  Identities=23%  Similarity=0.429  Sum_probs=63.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|+++++++..++.....   ++...+..++.+++.++.|+|..   +++|||+
T Consensus        69 ~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dl  137 (294)
T 4eqm_A           69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHDM---RIVHRDI  137 (294)
T ss_dssp             CBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            589999999999999999999999999999999876543   88899999999999999999999   9999996

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.68  E-value=3.6e-16  Score=84.88  Aligned_cols=71  Identities=27%  Similarity=0.481  Sum_probs=63.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+...++++|++.+|+|..++..... ..++...+..++.|++.|+.|||..   +++||||
T Consensus       274 ~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDl  344 (495)
T 1opk_A          274 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNL  344 (495)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            599999999999999999999999999999999976332 2278888899999999999999999   9999997

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.68  E-value=3.1e-16  Score=82.69  Aligned_cols=70  Identities=29%  Similarity=0.503  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+...++++||+++|++..++.....  .++...+..++.+++.|+.|||..   +++||||
T Consensus       104 ~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl  173 (373)
T 2qol_A          104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDL  173 (373)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCC
Confidence            599999999999999999999999999999999976432  288888999999999999999999   9999996

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.67  E-value=4.3e-16  Score=80.81  Aligned_cols=70  Identities=26%  Similarity=0.460  Sum_probs=63.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++.++++..++.....  .++...+..++.+++.|+.|||..   +++||||
T Consensus       108 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl  177 (325)
T 3kul_A          108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDL  177 (325)
T ss_dssp             CCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCC
Confidence            589999999999998899999999999999999865432  288889999999999999999999   9999997

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.67  E-value=4.1e-16  Score=83.89  Aligned_cols=69  Identities=16%  Similarity=0.240  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.+++..++++|++.+|++...+.....   +++..+..++.|++.|+.|+|..   +++||||
T Consensus        68 ~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~---~~e~~~~~i~~qil~aL~~lH~~---givHrDl  136 (444)
T 3soa_A           68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQM---GVVHRNL  136 (444)
T ss_dssp             CBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            599999999999999999999999999999998876443   88999999999999999999999   9999997

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.67  E-value=9.4e-16  Score=81.34  Aligned_cols=70  Identities=23%  Similarity=0.344  Sum_probs=63.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++.+|++...+.....  .+++..+..++.+++.|+.|||..   +++||||
T Consensus       106 ~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDl  175 (387)
T 1kob_A          106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEH---SIVHLDI  175 (387)
T ss_dssp             CSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---Ceeeccc
Confidence            589999999999999999999999999999998865332  288899999999999999999999   9999997

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.67  E-value=7e-16  Score=81.26  Aligned_cols=72  Identities=25%  Similarity=0.492  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +||||+++++++..++..++++||+.+|+|..++.....             ...++...+..++.|++.|+.|||..  
T Consensus       145 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--  222 (370)
T 2psq_A          145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--  222 (370)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            499999999999999999999999999999999876431             12267788889999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++||||
T Consensus       223 -~ivHrDl  229 (370)
T 2psq_A          223 -KCIHRDL  229 (370)
T ss_dssp             -TEECSCC
T ss_pred             -Ceecccc
Confidence             9999997

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.67  E-value=7.1e-16  Score=80.71  Aligned_cols=72  Identities=22%  Similarity=0.443  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++.++++...+.... ....+++..+..++.|++.|+.|+|..   +++||||
T Consensus        84 ~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDl  156 (351)
T 3c0i_A           84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDV  156 (351)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccC
Confidence            59999999999999999999999999999987775421 112278888899999999999999999   9999997

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.67  E-value=3.4e-16  Score=79.72  Aligned_cols=70  Identities=24%  Similarity=0.443  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++.++++..++.....  .++......++.+++.|+.|||+.   +++||||
T Consensus        70 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl  139 (289)
T 4fvq_A           70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFLEEN---TLIHGNV  139 (289)
T ss_dssp             CCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCc
Confidence            589999999999999999999999999999999976432  278888899999999999999999   9999996

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.67  E-value=4.1e-16  Score=80.86  Aligned_cols=69  Identities=23%  Similarity=0.371  Sum_probs=62.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++||+.++++...+.....   ++...+..++.|++.|+.|||..   +++||||
T Consensus        63 ~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~---givH~Dl  131 (323)
T 3tki_A           63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHGI---GITHRDI  131 (323)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHC---Ccccccc
Confidence            589999999999999999999999999999988865433   88899999999999999999999   9999996

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.66  E-value=7.1e-16  Score=83.61  Aligned_cols=69  Identities=23%  Similarity=0.465  Sum_probs=63.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++++|++.+++.....   ++...+..++.|++.|+.|+|..   +++||||
T Consensus        74 ~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~---givHrDL  142 (476)
T 2y94_A           74 RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHRH---MVVHRDL  142 (476)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSS---CCHHHHHHHHHHHHHHHHHHHTT---TEECSCC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCCcccc
Confidence            599999999999999999999999999999999875433   88999999999999999999999   9999997

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.66  E-value=9.6e-16  Score=83.12  Aligned_cols=69  Identities=30%  Similarity=0.510  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++.+|++...+.....   ++...+..++.+++.|+.|+|..   +++||||
T Consensus        94 ~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dl  162 (494)
T 3lij_A           94 DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK---FNEVDAAVIIKQVLSGVTYLHKH---NIVHRDL  162 (494)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CceeccC
Confidence            599999999999999999999999999999888866443   88888999999999999999999   9999996

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.66  E-value=5e-16  Score=80.62  Aligned_cols=69  Identities=28%  Similarity=0.359  Sum_probs=63.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++|++.++++...+.....   +....+..++.+++.|+.|+|..   +++||||
T Consensus        79 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dl  147 (327)
T 3a62_A           79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMALGHLHQK---GIIYRDL  147 (327)
T ss_dssp             CCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHhC---CEEcccC
Confidence            589999999999999999999999999999999876443   78888899999999999999999   9999997

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.66  E-value=1.1e-15  Score=82.99  Aligned_cols=69  Identities=30%  Similarity=0.561  Sum_probs=63.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++.+|++...+.....   +++..+..++.+++.|+.|||..   +++||||
T Consensus       104 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dl  172 (504)
T 3q5i_A          104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGICYLHKH---NIVHRDI  172 (504)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCC
Confidence            599999999999999999999999999999988876443   88999999999999999999999   9999996

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.66  E-value=7.1e-16  Score=82.75  Aligned_cols=69  Identities=22%  Similarity=0.337  Sum_probs=63.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +||||+++++++...+..++++||+.+|++...+.....   ++...+..++.+++.|+.|||. .   +++||||
T Consensus       206 ~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDl  275 (446)
T 4ejn_A          206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEK---NVVYRDL  275 (446)
T ss_dssp             SCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCC
T ss_pred             CCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHhhcC---CEEECCC
Confidence            489999999999999999999999999999988876443   8889999999999999999998 8   8999997

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.65  E-value=7.1e-16  Score=81.98  Aligned_cols=71  Identities=23%  Similarity=0.473  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..    +...++++||+.+|++..++..... ..+++..+..++.+++.|+.|||..   +++||||
T Consensus       113 ~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl  187 (400)
T 1nxk_A          113 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDV  187 (400)
T ss_dssp             TSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCc
Confidence            48999999998875    5578999999999999999976432 2388999999999999999999999   9999997

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.65  E-value=1.7e-15  Score=76.79  Aligned_cols=69  Identities=22%  Similarity=0.357  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.++...++++|++.++++...+.....   ++...+..++.+++.|+.|+|..   +++|||+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl  132 (277)
T 3f3z_A           64 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHKL---NVAHRDL  132 (277)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccCCCC
Confidence            589999999999999999999999999999988876443   88889999999999999999999   9999996

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.65  E-value=1.6e-15  Score=79.61  Aligned_cols=71  Identities=15%  Similarity=0.158  Sum_probs=62.9

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC--CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN--EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+|++++++.+..++..++++||+.+|+|..++....  ....+++..+..++.|++.|+.|+|..   +|+||||
T Consensus       126 ~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDi  198 (365)
T 3e7e_A          126 QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDI  198 (365)
T ss_dssp             GGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCC
T ss_pred             hhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCC
Confidence            7899999999999999999999999999999997421  122388999999999999999999999   9999997

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.65  E-value=1.5e-15  Score=76.84  Aligned_cols=70  Identities=26%  Similarity=0.539  Sum_probs=63.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++|+++++++..++.....  .++...+..++.+++.++.++|..   +++|||+
T Consensus        63 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~di  132 (269)
T 4hcu_A           63 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDL  132 (269)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCc
Confidence            489999999999999999999999999999999865332  278888999999999999999999   9999996

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.65  E-value=3e-15  Score=77.27  Aligned_cols=55  Identities=15%  Similarity=0.262  Sum_probs=47.0

Q ss_pred             EEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           18 MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        18 ~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .++++|++.++++..++.............+..++.|++.|+.|+|..   +++|||+
T Consensus       136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl  190 (332)
T 3qd2_B          136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDL  190 (332)
T ss_dssp             EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhC---CeeecCC
Confidence            799999999999999998754433345556788999999999999999   9999996

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.65  E-value=1.6e-15  Score=79.34  Aligned_cols=69  Identities=22%  Similarity=0.335  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..+...++++|++.++++...+.....   ++...+..++.+++.|+.|+|..   +++|||+
T Consensus       106 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Di  174 (349)
T 2w4o_A          106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHEN---GIVHRDL  174 (349)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEecCC
Confidence            489999999999999999999999999999998875433   78889999999999999999999   9999996

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.65  E-value=2e-15  Score=77.93  Aligned_cols=72  Identities=26%  Similarity=0.369  Sum_probs=62.9

Q ss_pred             CCCceeeEeeEEeeCC--eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK--CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~--~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++....  ..++++|++.++++..++........++...+..++.|++.|+.|||..   +++||||
T Consensus        65 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl  138 (319)
T 4euu_A           65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNI  138 (319)
T ss_dssp             CCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCC
Confidence            5899999999988755  7899999999999999997643333378889999999999999999999   9999996

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.65  E-value=9.2e-16  Score=78.56  Aligned_cols=67  Identities=10%  Similarity=0.127  Sum_probs=59.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++||+.++++..++.. +    ........++.|++.|+.|+|..   +++||||
T Consensus        89 ~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Di  155 (286)
T 3uqc_A           89 DKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT-S----PSPVGAIRAMQSLAAAADAAHRA---GVALSID  155 (286)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT-C----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc-C----CChHHHHHHHHHHHHHHHHHHHC---CCccCCC
Confidence            589999999999999999999999999999999853 2    34456788899999999999999   9999997

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.65  E-value=5.2e-16  Score=80.09  Aligned_cols=72  Identities=31%  Similarity=0.514  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCC--eEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPS--IIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~--i~hrdl   75 (75)
                      +||||+++++++..+...++++|++.+|++..++........++...+..++.+++.|+.|+|..   +  ++||||
T Consensus        92 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Di  165 (309)
T 3p86_A           92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNL  165 (309)
T ss_dssp             CCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTC
T ss_pred             CCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCC
Confidence            58999999999999999999999999999999997643323378888899999999999999998   8  999996

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.65  E-value=2.4e-15  Score=83.13  Aligned_cols=71  Identities=21%  Similarity=0.249  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+.+|++...+..... ..+++..+..++.+++.|+.|||..   +|+||||
T Consensus       242 ~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~-~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDL  312 (576)
T 2acx_A          242 NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDL  312 (576)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCC
Confidence            589999999999999999999999999999998876432 2288889999999999999999999   9999997

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.64  E-value=1.1e-15  Score=80.59  Aligned_cols=70  Identities=20%  Similarity=0.354  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++||++++++...+.....  .+++.....++.|++.|+.|||..   +++||||
T Consensus       144 ~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl  213 (373)
T 2x4f_A          144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY--NLTELDTILFMKQICEGIRHMHQM---YILHLDL  213 (373)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccC
Confidence            589999999999999999999999999999888765322  278888899999999999999999   9999997

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.64  E-value=3.3e-15  Score=77.36  Aligned_cols=72  Identities=31%  Similarity=0.522  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-------------CcccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-------------EALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +||||+++++++..++..++++|+++++++.+++....             ....++...+..++.+++.|+.|||..  
T Consensus        84 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--  161 (327)
T 1fvr_A           84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--  161 (327)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            48999999999999999999999999999999987542             112378889999999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++||||
T Consensus       162 -~ivH~dl  168 (327)
T 1fvr_A          162 -QFIHRDL  168 (327)
T ss_dssp             -TEECSCC
T ss_pred             -CccCCCC
Confidence             9999996

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.64  E-value=2.1e-15  Score=81.09  Aligned_cols=71  Identities=27%  Similarity=0.469  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCC-eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK-CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.... ..++++|++.+|+|.+++..... ..++...+..++.+++.|+.|||..   +++||||
T Consensus       244 ~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDl  315 (450)
T 1k9a_A          244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDL  315 (450)
T ss_dssp             CCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             cCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence            5999999999987765 79999999999999999986432 2267888899999999999999999   9999997

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.64  E-value=1.7e-15  Score=76.54  Aligned_cols=70  Identities=24%  Similarity=0.523  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+...++++|+++++++..++.....  .++...+..++.+++.++.|+|..   +++|||+
T Consensus        61 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~di  130 (268)
T 3sxs_A           61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGK--GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDL  130 (268)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSC
T ss_pred             CCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCc
Confidence            489999999999999999999999999999999876432  278889999999999999999999   9999996

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=2.4e-15  Score=78.19  Aligned_cols=72  Identities=29%  Similarity=0.476  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCc--------------------ccCCHHhHHHHHHHHHHHhh
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEA--------------------LELNWTNNVNIAKCVAHALS   60 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~l~   60 (75)
                      +||||+++++.+..++..++++|++++|++..++......                    ..+++..+..++.+++.|+.
T Consensus       107 ~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~  186 (344)
T 1rjb_A          107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGME  186 (344)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHH
Confidence            4999999999999999999999999999999999764321                    12677888899999999999


Q ss_pred             HhhhCCCCCeEeccC
Q 039179           61 YLHHHCTPSIIYRDI   75 (75)
Q Consensus        61 ~l~~~~~~~i~hrdl   75 (75)
                      |||..   +++||||
T Consensus       187 ~LH~~---~ivH~Di  198 (344)
T 1rjb_A          187 FLEFK---SCVHRDL  198 (344)
T ss_dssp             HHHHT---TEEETTC
T ss_pred             HHHhC---CcccCCC
Confidence            99999   9999997

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.64  E-value=1.9e-15  Score=81.66  Aligned_cols=69  Identities=25%  Similarity=0.451  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++...+..++++|++.+|++...+.....   ++...+..++.+++.|+.|+|..   +++||||
T Consensus        84 ~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dl  152 (484)
T 3nyv_A           84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHKN---KIVHRDL  152 (484)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSC---CBHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeeCCC
Confidence            599999999999999999999999999999988876443   88899999999999999999999   9999997

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.64  E-value=2.3e-15  Score=77.80  Aligned_cols=69  Identities=20%  Similarity=0.328  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.++...++++|++.++++..++.....   ++...+..++.+++.|+.|+|..   +++|||+
T Consensus        73 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~~---~ivH~di  141 (321)
T 2a2a_A           73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHTK---KIAHFDL  141 (321)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSC---EEHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            489999999999999999999999999999999876433   78889999999999999999999   9999996

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.64  E-value=1.4e-15  Score=76.74  Aligned_cols=71  Identities=25%  Similarity=0.407  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCC--eEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPS--IIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~--i~hrdl   75 (75)
                      +||||+++++++.++  ...++++|++++|++.+++..... ..++...+..++.+++.|+.|+|+.   +  ++|||+
T Consensus        65 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~di  139 (271)
T 3kmu_A           65 SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHAL  139 (271)
T ss_dssp             SCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCC
T ss_pred             CCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCC
Confidence            499999999999887  678999999999999999976432 2378889999999999999999998   7  999996

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.64  E-value=3.8e-15  Score=77.21  Aligned_cols=68  Identities=29%  Similarity=0.537  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++||+.++++...+... .   +++..+..++.+++.|+.|+|..   +++|||+
T Consensus       100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~---l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl  167 (321)
T 2c30_A          100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-R---LNEEQIATVCEAVLQALAYLHAQ---GVIHRDI  167 (321)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-C---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-C---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            5899999999999999999999999999999988642 2   88899999999999999999999   9999996

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.64  E-value=2.7e-15  Score=78.00  Aligned_cols=69  Identities=23%  Similarity=0.392  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+.+++..++++|++.++++..++.....   ++...+..++.+++.++.|||..   +++||||
T Consensus        99 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dl  167 (335)
T 2owb_A           99 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRN---RVIHRDL  167 (335)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CCEecCC
Confidence            589999999999999999999999999999998876443   88889999999999999999999   9999996

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=2.2e-15  Score=79.00  Aligned_cols=69  Identities=26%  Similarity=0.287  Sum_probs=63.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..+...++++||+.++++..++.....   ++...+..++.|++.|+.|||..   +++||||
T Consensus       117 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dl  185 (355)
T 1vzo_A          117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHKL---GIIYRDI  185 (355)
T ss_dssp             TCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            489999999999999999999999999999999876443   88889999999999999999999   9999997

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.63  E-value=3.8e-15  Score=76.11  Aligned_cols=69  Identities=23%  Similarity=0.392  Sum_probs=63.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++|++.++++...+.....   ++...+..++.+++.|+.|+|..   +++|||+
T Consensus        73 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl  141 (294)
T 2rku_A           73 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRN---RVIHRDL  141 (294)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            589999999999999999999999999999998876443   88889999999999999999999   9999996

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.63  E-value=2.9e-15  Score=76.82  Aligned_cols=71  Identities=23%  Similarity=0.473  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..    +...++++|++.++++..++..... ..++...+..++.+++.|+.|+|..   +++|||+
T Consensus        69 ~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl  143 (299)
T 3m2w_A           69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDV  143 (299)
T ss_dssp             TSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             cCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            58999999999876    6678999999999999999976432 2388899999999999999999999   9999996

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.63  E-value=1.7e-15  Score=84.75  Aligned_cols=69  Identities=20%  Similarity=0.341  Sum_probs=63.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++|+++++++.+.+..++++||+.+|+|..++.....   +++..+..++.+++.|+.|||..   +|+||||
T Consensus       400 ~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDL  468 (674)
T 3pfq_A          400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQSK---GIIYRDL  468 (674)
T ss_dssp             CCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---SEECCCC
T ss_pred             CCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeEeccC
Confidence            489999999999999999999999999999999976543   88999999999999999999999   9999997

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.63  E-value=4e-15  Score=75.59  Aligned_cols=69  Identities=23%  Similarity=0.334  Sum_probs=63.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..+...++++|++.++++..++.....   ++...+..++.+++.|+.++|..   +++|||+
T Consensus        66 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  134 (283)
T 3bhy_A           66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSK---RIAHFDL  134 (283)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CccCCCC
Confidence            489999999999999999999999999999999876433   88899999999999999999999   9999996

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.63  E-value=1.9e-15  Score=81.76  Aligned_cols=69  Identities=25%  Similarity=0.444  Sum_probs=63.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+...++++|++.++++...+.....   ++...+..++.+++.|+.|+|..   +++||||
T Consensus        79 ~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dl  147 (486)
T 3mwu_A           79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKH---NIVHRDL  147 (486)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEeccC
Confidence            599999999999999999999999999999888866443   88899999999999999999999   9999997

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.63  E-value=2.5e-15  Score=77.14  Aligned_cols=72  Identities=35%  Similarity=0.557  Sum_probs=63.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|+++++++..++........+++.....++.+++.|+.|+|..   +++|||+
T Consensus        88 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl  159 (307)
T 2nru_A           88 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDI  159 (307)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCC
Confidence            58999999999999999999999999999999987533223378888899999999999999999   9999996

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.63  E-value=4.6e-15  Score=75.81  Aligned_cols=69  Identities=23%  Similarity=0.403  Sum_probs=63.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..+...++++|++.++++..++.....   ++...+..++.+++.|+.|+|..   +++|+|+
T Consensus        82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  150 (298)
T 1phk_A           82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALLEVICALHKL---NIVHRDL  150 (298)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            499999999999999999999999999999999876433   88889999999999999999999   9999996

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.63  E-value=4.4e-15  Score=75.35  Aligned_cols=70  Identities=19%  Similarity=0.426  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.+++..++++|+++++++..++.....  .++...+..++.+++.|+.|+|..   +++|||+
T Consensus        69 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  138 (278)
T 3cok_A           69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK--PFSENEARHFMHQIITGMLYLHSH---GILHRDL  138 (278)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSSC
T ss_pred             CCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            489999999999999999999999999999999875322  278889999999999999999999   9999996

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.63  E-value=2.3e-15  Score=78.16  Aligned_cols=72  Identities=32%  Similarity=0.519  Sum_probs=63.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC---------------------cccCCHHhHHHHHHHHHHHh
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE---------------------ALELNWTNNVNIAKCVAHAL   59 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l   59 (75)
                      +||||+++++++..++..++++||+.++++..++.....                     ...++...+..++.+++.|+
T Consensus       108 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l  187 (343)
T 1luf_A          108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM  187 (343)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence            599999999999999999999999999999999876321                     12378888899999999999


Q ss_pred             hHhhhCCCCCeEeccC
Q 039179           60 SYLHHHCTPSIIYRDI   75 (75)
Q Consensus        60 ~~l~~~~~~~i~hrdl   75 (75)
                      .|||..   +++||||
T Consensus       188 ~~LH~~---~ivH~Dl  200 (343)
T 1luf_A          188 AYLSER---KFVHRDL  200 (343)
T ss_dssp             HHHHHT---TCCCSCC
T ss_pred             HHHHhC---CeecCCC
Confidence            999999   9999996

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.63  E-value=2.9e-15  Score=76.11  Aligned_cols=69  Identities=30%  Similarity=0.523  Sum_probs=63.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++.++++...+.....   ++...+..++.+++.++.|||..   +++|||+
T Consensus        67 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dl  135 (279)
T 3fdn_A           67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHSK---RVIHRDI  135 (279)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTT---TCEECCC
T ss_pred             CCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CEecccC
Confidence            489999999999999999999999999999998876443   88888999999999999999999   9999996

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.62  E-value=3e-15  Score=76.88  Aligned_cols=72  Identities=25%  Similarity=0.493  Sum_probs=63.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC---------------------cccCCHHhHHHHHHHHHHHh
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE---------------------ALELNWTNNVNIAKCVAHAL   59 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l   59 (75)
                      +||||+++++++..++..++++|++.++++..++.....                     ...++...+..++.+++.|+
T Consensus        84 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  163 (314)
T 2ivs_A           84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGM  163 (314)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHH
T ss_pred             CCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHH
Confidence            599999999999999999999999999999999976332                     12267788899999999999


Q ss_pred             hHhhhCCCCCeEeccC
Q 039179           60 SYLHHHCTPSIIYRDI   75 (75)
Q Consensus        60 ~~l~~~~~~~i~hrdl   75 (75)
                      .|+|..   +++||||
T Consensus       164 ~~lH~~---~ivH~di  176 (314)
T 2ivs_A          164 QYLAEM---KLVHRDL  176 (314)
T ss_dssp             HHHHHT---TEECCCC
T ss_pred             HHHHHC---CCccccc
Confidence            999999   9999996

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.62  E-value=2.5e-15  Score=76.41  Aligned_cols=70  Identities=29%  Similarity=0.578  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++.+++..++++|++.++++..++.....  .++...+..++.+++.++.|+|..   +++|||+
T Consensus        77 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~di  146 (283)
T 3gen_A           77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL  146 (283)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSC
T ss_pred             CCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCC
Confidence            489999999999999999999999999999999876322  288889999999999999999999   9999996

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.62  E-value=2.9e-15  Score=79.10  Aligned_cols=72  Identities=29%  Similarity=0.483  Sum_probs=63.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +||||+++++++..++..++++|++.+|+|..++.....             ...+++..+..++.+++.|+.|||+.  
T Consensus       133 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--  210 (382)
T 3tt0_A          133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--  210 (382)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC--
Confidence            599999999999999999999999999999999976431             12378889999999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++||||
T Consensus       211 -~ivH~Dl  217 (382)
T 3tt0_A          211 -KCIHRDL  217 (382)
T ss_dssp             -TCCCSCC
T ss_pred             -CEecCCC
Confidence             9999997

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.62  E-value=3.4e-15  Score=75.98  Aligned_cols=69  Identities=28%  Similarity=0.550  Sum_probs=63.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++++..++..++++|+++++++...+.....   ++......++.+++.|+.|+|..   +++|||+
T Consensus        72 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  140 (284)
T 2vgo_A           72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHER---KVIHRDI  140 (284)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTT---TEECCCC
T ss_pred             CCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CceecCC
Confidence            489999999999999999999999999999999876443   88889999999999999999999   9999996

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.62  E-value=1.4e-15  Score=80.03  Aligned_cols=72  Identities=29%  Similarity=0.436  Sum_probs=63.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC----cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE----ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+...++++|++.+|+|..++.....    ...+....+..++.+++.|+.|||..   +++||||
T Consensus       132 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl  207 (367)
T 3l9p_A          132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDI  207 (367)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence            599999999999999999999999999999999976321    12377888899999999999999999   9999997

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.62  E-value=8.3e-15  Score=76.37  Aligned_cols=69  Identities=23%  Similarity=0.346  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCC-CHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERG-SLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++|++..| ++..++.....   ++...+..++.+++.|+.|||..   +++||||
T Consensus        87 ~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~---l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl  156 (335)
T 3dls_A           87 EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYLRLK---DIIHRDI  156 (335)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeEEecc
Confidence            5899999999999999999999999777 99888876443   88899999999999999999999   9999996

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.62  E-value=6.1e-15  Score=77.12  Aligned_cols=70  Identities=23%  Similarity=0.266  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .|+||+++++.+...+..++++|++ ++++..++..... ..++...+..++.|++.|+.|||..   +++||||
T Consensus        94 ~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl  163 (360)
T 3llt_A           94 NNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDL  163 (360)
T ss_dssp             TGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCC
Confidence            3899999999999999999999999 8999999876432 2378888999999999999999999   9999997

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.62  E-value=4.6e-15  Score=75.69  Aligned_cols=72  Identities=28%  Similarity=0.349  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+...+..++++|+++++++..++........+....+..++.+++.|+.|+|..   +++|+|+
T Consensus        77 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  148 (295)
T 2clq_A           77 KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDI  148 (295)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCC
Confidence            58999999999999999999999999999999987643333356778888999999999999999   9999996

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.62  E-value=5.9e-15  Score=75.01  Aligned_cols=69  Identities=17%  Similarity=0.318  Sum_probs=62.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++|++.++++...+.....   ++...+..++.+++.|+.|+|..   +++|||+
T Consensus        63 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di  131 (284)
T 3kk8_A           63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHSN---GIVHRNL  131 (284)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CcCcCCC
Confidence            589999999999999999999999999999888876443   88889999999999999999999   9999996

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.62  E-value=3.1e-15  Score=79.35  Aligned_cols=72  Identities=26%  Similarity=0.369  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCC--eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK--CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~--~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++....  ..++++||+.+|++..++........++...+..++.+++.|+.|||..   +++||||
T Consensus        65 ~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl  138 (396)
T 4eut_A           65 NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNI  138 (396)
T ss_dssp             CCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCc
Confidence            5899999999998755  6899999999999999987643333378889999999999999999999   9999997

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.62  E-value=5.4e-15  Score=76.44  Aligned_cols=75  Identities=37%  Similarity=0.759  Sum_probs=65.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..+...++++|++.+|++..++.... ....+++.....++.+++.|+.|+|..+.++++||||
T Consensus        85 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dl  160 (326)
T 3uim_A           85 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDV  160 (326)
T ss_dssp             CCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCC
T ss_pred             cCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCC
Confidence            48999999999999999999999999999999997632 2223788889999999999999999987778999996

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.61  E-value=9.4e-15  Score=75.79  Aligned_cols=69  Identities=20%  Similarity=0.304  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..+...++++|++ ++++.+++.....  .++...+..++.+++.|+.|||..   +++||||
T Consensus        63 ~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDl  131 (330)
T 2izr_A           63 SGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDR--TFSLKTVLMIAIQLISRMEYVHSK---NLIYRDV  131 (330)
T ss_dssp             SCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCC
Confidence            4899999999999999999999999 8999999876422  288999999999999999999999   9999997

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.61  E-value=5e-15  Score=82.20  Aligned_cols=69  Identities=22%  Similarity=0.427  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.. +..++++|++.+|++..++.....  .++...+..++.+++.|+.|||..   +++||||
T Consensus       394 ~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDl  462 (613)
T 2ozo_A          394 DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEK---NFVHRNL  462 (613)
T ss_dssp             CCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcC
Confidence            59999999999876 568999999999999999865332  288899999999999999999999   9999997

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=3.1e-15  Score=77.79  Aligned_cols=70  Identities=30%  Similarity=0.484  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+...+..++++|++.++++..++.....  .++...+..++.+++.|+.|||..   +++||||
T Consensus       104 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di  173 (333)
T 1mqb_A          104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDL  173 (333)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence            589999999999999999999999999999999876432  288889999999999999999999   9999996

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.61  E-value=9.7e-15  Score=75.33  Aligned_cols=69  Identities=17%  Similarity=0.070  Sum_probs=61.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++|++ ++++...+.....  .+++..+..++.+++.|+.|||..   +++||||
T Consensus       115 ~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di  183 (311)
T 3p1a_A          115 QHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGA--SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDV  183 (311)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCC
Confidence            4899999999999999999999999 6688888765432  288999999999999999999999   9999996

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.61  E-value=4.3e-15  Score=75.19  Aligned_cols=69  Identities=23%  Similarity=0.371  Sum_probs=62.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++|++.++++...+.....   ++...+..++.+++.|+.|+|..   +++|+|+
T Consensus        63 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  131 (276)
T 2yex_A           63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHGI---GITHRDI  131 (276)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHhC---CeeccCC
Confidence            589999999999999999999999999999888865322   88889999999999999999999   9999996

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.61  E-value=4.4e-15  Score=74.88  Aligned_cols=70  Identities=26%  Similarity=0.506  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++.+..++..++++|+++++++.+++.....  .++...+..++.+++.++.++|..   +++|+|+
T Consensus        61 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  130 (267)
T 3t9t_A           61 SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDL  130 (267)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSC
T ss_pred             CCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcc--cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            589999999999999999999999999999999876432  278888899999999999999999   9999996

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.61  E-value=7.8e-15  Score=76.19  Aligned_cols=72  Identities=25%  Similarity=0.492  Sum_probs=62.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +||||+++++++..++..++++|++.+|++..++.....             ...++...+..++.+++.|+.|+|..  
T Consensus        99 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~--  176 (334)
T 2pvf_A           99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ--  176 (334)
T ss_dssp             CCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             cCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            589999999999999999999999999999999976431             11267788899999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++||||
T Consensus       177 -~ivH~Dl  183 (334)
T 2pvf_A          177 -KCIHRDL  183 (334)
T ss_dssp             -TEECSCC
T ss_pred             -CeeCCCC
Confidence             9999996

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.61  E-value=6.1e-15  Score=75.79  Aligned_cols=69  Identities=20%  Similarity=0.307  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++|++.++++.........   ++...+..++.+++.|+.|+|..   +++|||+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dl  128 (311)
T 4agu_A           60 KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKH---NCIHRDV  128 (311)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcC---CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCC
Confidence            589999999999999999999999999999888765433   88889999999999999999999   9999996

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.61  E-value=9.5e-15  Score=74.79  Aligned_cols=70  Identities=27%  Similarity=0.473  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..+  ...++++|+++++++..++......  ++......++.+++.++.|+|..   +++|||+
T Consensus        81 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di  152 (302)
T 4e5w_A           81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGSR---QYVHRDL  152 (302)
T ss_dssp             CCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTT--CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHhhcC---CcccCCC
Confidence            589999999999876  5689999999999999998654322  78889999999999999999999   9999996

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.61  E-value=6.6e-15  Score=75.57  Aligned_cols=69  Identities=22%  Similarity=0.348  Sum_probs=62.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++|++.++++...+.....   ++...+..++.+++.|+.|+|..   +++|||+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~di  132 (304)
T 2jam_A           64 KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQQVLSAVKYLHEN---GIVHRDL  132 (304)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCSC
T ss_pred             CCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            589999999999999999999999999999988866443   78888999999999999999999   9999996

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.61  E-value=5e-15  Score=76.30  Aligned_cols=69  Identities=19%  Similarity=0.274  Sum_probs=63.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++.++++..++.....   ++...+..++.+++.++.|+|..   +++|||+
T Consensus        92 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl  160 (309)
T 2h34_A           92 QEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGP---LAPPRAVAIVRQIGSALDAAHAA---GATHRDV  160 (309)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---cCCcCCC
Confidence            589999999999999999999999999999999876443   88889999999999999999999   9999996

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.61  E-value=1.2e-14  Score=79.87  Aligned_cols=72  Identities=21%  Similarity=0.255  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++||+.+|++...+..... ...+++..+..++.+++.|+.|||..   +|+||||
T Consensus       243 ~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDL  315 (543)
T 3c4z_A          243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDL  315 (543)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCC
Confidence            589999999999999999999999999999998875321 22388889999999999999999999   9999997

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.61  E-value=7.3e-15  Score=74.94  Aligned_cols=72  Identities=21%  Similarity=0.367  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.+....++++|++.++++...+.... ....++...+..++.+++.|+.|||..   +++|||+
T Consensus        78 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~di  150 (285)
T 3is5_A           78 DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDL  150 (285)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCC
Confidence            58999999999999999999999999999998885421 112288889999999999999999999   9999996

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.60  E-value=2.7e-15  Score=78.37  Aligned_cols=68  Identities=22%  Similarity=0.418  Sum_probs=61.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++||+ +|++.+.+.....   ++...+..++.|++.|+.|+|..   +++|||+
T Consensus        67 ~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~~---givH~Dl  134 (336)
T 3h4j_B           67 RHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKR---MTEDEGRRFFQQIICAIEYCHRH---KIVHRDL  134 (336)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHH---TCCCCCC
T ss_pred             CCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeEecCC
Confidence            5899999999999999999999999 6888888766443   88999999999999999999999   9999996

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.60  E-value=5.5e-15  Score=74.87  Aligned_cols=69  Identities=23%  Similarity=0.441  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++|++.++++.+++.....   ++......++.+++.|+.++|..   +++|+|+
T Consensus        69 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  137 (276)
T 2h6d_A           69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCHRH---MVVHRDL  137 (276)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHH---CSSCCCC
T ss_pred             CCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CCccCCC
Confidence            489999999999999999999999999999999876443   78888999999999999999999   9999996

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.60  E-value=1.3e-15  Score=78.42  Aligned_cols=69  Identities=22%  Similarity=0.405  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++....    ..++++||+.++++..++.....   ++...+..++.+++.++.|+|..   +++||||
T Consensus        70 ~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dl  142 (311)
T 3ork_A           70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQN---GIIHRDV  142 (311)
T ss_dssp             CCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence            5899999999987654    34899999999999999876443   88889999999999999999999   9999996

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.60  E-value=4.4e-15  Score=76.73  Aligned_cols=72  Identities=38%  Similarity=0.696  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++.+|++..++..... ...+++.....++.+++.|+.|+|..   +++|||+
T Consensus        93 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dl  165 (321)
T 2qkw_B           93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDV  165 (321)
T ss_dssp             CCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCC
Confidence            589999999999999999999999999999998865321 12378888999999999999999999   9999996

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.60  E-value=4.1e-15  Score=75.73  Aligned_cols=71  Identities=28%  Similarity=0.493  Sum_probs=63.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++.++...++++|++.++++..++..... ..++...+..++.+++.++.|+|..   +++|||+
T Consensus        67 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~di  137 (288)
T 3kfa_A           67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDL  137 (288)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCC
T ss_pred             CCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCC
Confidence            489999999999999999999999999999999976332 2378888899999999999999999   9999996

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.60  E-value=8.4e-15  Score=74.85  Aligned_cols=69  Identities=19%  Similarity=0.314  Sum_probs=58.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++|++.+ ++...+.....  .++...+..++.|++.|+.|+|..   +++|||+
T Consensus        59 ~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~di  127 (292)
T 3o0g_A           59 KHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDL  127 (292)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            589999999999999999999999986 44444443222  288899999999999999999999   9999996

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.60  E-value=2.1e-15  Score=78.13  Aligned_cols=72  Identities=28%  Similarity=0.455  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-----------cccCCHHhHHHHHHHHHHHhhHhhhCCCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-----------ALELNWTNNVNIAKCVAHALSYLHHHCTPS   69 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~   69 (75)
                      +||||+++++++..++..++++|++.+|++.+++.....           ...++...+..++.+++.|+.|||..   +
T Consensus       108 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~  184 (333)
T 2i1m_A          108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---N  184 (333)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             CCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---C
Confidence            499999999999999999999999999999999875210           12267888899999999999999999   9


Q ss_pred             eEeccC
Q 039179           70 IIYRDI   75 (75)
Q Consensus        70 i~hrdl   75 (75)
                      ++||||
T Consensus       185 ivH~Dl  190 (333)
T 2i1m_A          185 CIHRDV  190 (333)
T ss_dssp             EECSCC
T ss_pred             cccCCc
Confidence            999996

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.60  E-value=1.2e-14  Score=76.54  Aligned_cols=69  Identities=26%  Similarity=0.453  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++......++++||+.++++..++.....   ++...+..++.+++.|+.|+|..   +++|+|+
T Consensus       158 ~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dl  226 (365)
T 2y7j_A          158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIMRSLLEAVSFLHAN---NIVHRDL  226 (365)
T ss_dssp             TCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            489999999999999999999999999999999875433   88889999999999999999999   9999996

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.60  E-value=4.8e-15  Score=76.14  Aligned_cols=72  Identities=28%  Similarity=0.456  Sum_probs=63.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCc---------------ccCCHHhHHHHHHHHHHHhhHhhhC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEA---------------LELNWTNNVNIAKCVAHALSYLHHH   65 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l~~l~~~   65 (75)
                      +||||+++++++..++..++++|++.+|++..++......               ..++...+..++.+++.|+.|+|..
T Consensus        85 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  164 (313)
T 1t46_A           85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK  164 (313)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            5999999999999999999999999999999998764321               1378888999999999999999999


Q ss_pred             CCCCeEeccC
Q 039179           66 CTPSIIYRDI   75 (75)
Q Consensus        66 ~~~~i~hrdl   75 (75)
                         +++|||+
T Consensus       165 ---~i~H~dl  171 (313)
T 1t46_A          165 ---NCIHRDL  171 (313)
T ss_dssp             ---TCCCSCC
T ss_pred             ---CeecCCC
Confidence               9999996

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.60  E-value=8.9e-15  Score=75.89  Aligned_cols=71  Identities=15%  Similarity=0.271  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+...++++|++.+|++..++..... ..++...+..++.+++.|+.|||..   +++||||
T Consensus        87 ~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Di  157 (327)
T 3lm5_A           87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELA-EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDL  157 (327)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcC
Confidence            379999999999999999999999999999988865322 2388889999999999999999999   9999996

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.59  E-value=4.1e-15  Score=78.06  Aligned_cols=69  Identities=19%  Similarity=0.339  Sum_probs=60.4

Q ss_pred             CCCceeeEeeEEeeC----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++...    ...++++|++ ++++..++.....  .+++..+..++.|++.|+.|||..   +++||||
T Consensus       106 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDl  178 (364)
T 3op5_A          106 KYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAK--RFSRKTVLQLSLRILDILEYIHEH---EYVHGDI  178 (364)
T ss_dssp             SCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             cCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEEecC
Confidence            489999999998775    4589999999 9999999876422  288999999999999999999999   9999997

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.59  E-value=5.7e-15  Score=82.27  Aligned_cols=68  Identities=21%  Similarity=0.416  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++.. +..++++|++.+|++..++.....   +....+..++.+++.|+.|||..   +|+||||
T Consensus       428 ~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDL  495 (635)
T 4fl3_A          428 DNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEES---NFVHRDL  495 (635)
T ss_dssp             CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCC---CCHHHHHHHHHHHHHHHHHHHHC---CEeCCCC
Confidence            59999999998864 568899999999999999976443   88889999999999999999999   9999997

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.59  E-value=5.7e-15  Score=77.12  Aligned_cols=72  Identities=24%  Similarity=0.372  Sum_probs=60.7

Q ss_pred             CCCceeeEeeEEeeCC-eEEEEEecCCCCCHHHHhhccCC----------------------------------------
Q 039179            1 QHQNIVKLYGFCLHKK-CMFAIYKYMERGSLCCVLHKENE----------------------------------------   39 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~~~~~~----------------------------------------   39 (75)
                      +||||+++++++..++ ..++++||+.+|++..++.....                                        
T Consensus        84 ~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (359)
T 3vhe_A           84 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSA  163 (359)
T ss_dssp             CCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------
T ss_pred             CCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccc
Confidence            4899999999998755 48999999999999999876322                                        


Q ss_pred             -----------------------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           40 -----------------------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        40 -----------------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                                             ...++...+..++.+++.|+.|||..   +++||||
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Di  219 (359)
T 3vhe_A          164 SSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL  219 (359)
T ss_dssp             --------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             ccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence                                   01167778888999999999999999   9999997

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.59  E-value=6.7e-15  Score=75.34  Aligned_cols=70  Identities=24%  Similarity=0.422  Sum_probs=61.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|+++++++..++.....  .++...+..++.+++.|+.|+|..   +++|||+
T Consensus        74 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  143 (302)
T 2j7t_A           74 DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDL  143 (302)
T ss_dssp             CCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCC
Confidence            589999999999999999999999999999988865322  288889999999999999999999   9999996

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.59  E-value=1.7e-14  Score=73.78  Aligned_cols=72  Identities=26%  Similarity=0.402  Sum_probs=62.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhcc-----CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE-----NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++|+++++++..++...     .....++...+..++.+++.|+.|+|..   +++|||+
T Consensus        71 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl  147 (303)
T 2vwi_A           71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDV  147 (303)
T ss_dssp             CCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCC
Confidence            4899999999999999999999999999999988631     1112378889999999999999999999   9999996

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.59  E-value=1.4e-14  Score=74.04  Aligned_cols=68  Identities=21%  Similarity=0.434  Sum_probs=61.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++ ..+..++++|++.++++..++.....   ++...+..++.+++.|+.|+|..   +++|||+
T Consensus        76 ~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~---~i~H~di  143 (291)
T 1xbb_A           76 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEES---NFVHRDL  143 (291)
T ss_dssp             CCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcC---CCHHHHHHHHHHHHHHHHHHHhC---CeEcCCC
Confidence            589999999998 56778999999999999999976443   88889999999999999999999   9999996

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.59  E-value=1e-14  Score=75.70  Aligned_cols=68  Identities=21%  Similarity=0.367  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+...++++|++. |++..++.....   ++...+..++.+++.|+.|||..   +++||||
T Consensus        91 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dl  158 (329)
T 3gbz_A           91 QHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPD---VSMRVIKSFLYQLINGVNFCHSR---RCLHRDL  158 (329)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CEECCCC
Confidence            58999999999999999999999997 588888876443   88889999999999999999999   9999996

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.59  E-value=7.2e-15  Score=74.27  Aligned_cols=71  Identities=31%  Similarity=0.495  Sum_probs=59.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++|++.++++..++...    .++...+..++.+++.|+.|+|.....+++|||+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~di  134 (271)
T 3dtc_A           64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDL  134 (271)
T ss_dssp             CCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCC
T ss_pred             CCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCC
Confidence            5899999999999999999999999999999888542    2888899999999999999999981112899996

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.59  E-value=4.5e-15  Score=77.44  Aligned_cols=68  Identities=16%  Similarity=0.261  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..    +...++++|++ ++++..++....   .+++..+..++.|++.|+.|||..   +++||||
T Consensus       106 ~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl  177 (345)
T 2v62_A          106 DYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDI  177 (345)
T ss_dssp             SCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             cccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCc
Confidence            48999999999988    67899999999 999999987643   288999999999999999999999   9999997

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.59  E-value=7.6e-15  Score=74.66  Aligned_cols=69  Identities=28%  Similarity=0.394  Sum_probs=60.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++. ++..++++|++.++++..++.....  .++...+..++.+++.|+.|+|..   +++|||+
T Consensus        74 ~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  142 (281)
T 1mp8_A           74 DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLESK---RFVHRDI  142 (281)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence            5899999999874 5678899999999999999875432  278888999999999999999999   9999996

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.58  E-value=1.5e-14  Score=74.70  Aligned_cols=69  Identities=25%  Similarity=0.416  Sum_probs=60.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++.+ ++...+.....  .++...+..++.|++.|+.|||+.   +++|||+
T Consensus        77 ~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Di  145 (311)
T 3niz_A           77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDL  145 (311)
T ss_dssp             CCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            589999999999999999999999985 77777655332  288888999999999999999999   9999996

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.58  E-value=3.1e-15  Score=80.52  Aligned_cols=70  Identities=23%  Similarity=0.444  Sum_probs=60.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++. .+..++++|++.+|++.+++..... ..++......++.+++.|+.|||..   +++||||
T Consensus       241 ~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDl  310 (454)
T 1qcf_A          241 QHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDL  310 (454)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHH-HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSC
T ss_pred             CCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCC
Confidence            5999999999886 5678999999999999999975321 1277888889999999999999999   9999997

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.58  E-value=1e-14  Score=76.32  Aligned_cols=69  Identities=28%  Similarity=0.355  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++|++.++++..++.....   ++...+..++.+++.++.|+|. .   +++|||+
T Consensus        89 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dl  158 (360)
T 3eqc_A           89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKH---KIMHRDV  158 (360)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCC
T ss_pred             CCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCc
Confidence            589999999999999999999999999999999876443   8888899999999999999998 5   6999996

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.58  E-value=8.4e-15  Score=78.24  Aligned_cols=68  Identities=25%  Similarity=0.322  Sum_probs=59.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++. .+..++++|++.+|++...+.....   +++..+..++.|++.|+.|||..   +++||||
T Consensus       198 ~hpniv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDl  265 (419)
T 3i6u_A          198 NHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHEN---GIIHRDL  265 (419)
T ss_dssp             CCTTBCCCCEEEE-SSEEEEEEECCTTCBGGGGTSSSCC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEe-cCceEEEEEcCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            5999999999875 4568999999999999888765433   88899999999999999999999   9999996

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.58  E-value=1.8e-14  Score=74.09  Aligned_cols=70  Identities=26%  Similarity=0.439  Sum_probs=62.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++|++.++++..++.....  .++...+..++.+++.|+.|+|..   +++|+|+
T Consensus        82 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl  151 (314)
T 3com_A           82 DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYLHFM---RKIHRDI  151 (314)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCc
Confidence            589999999999999999999999999999999864222  288889999999999999999999   9999996

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.58  E-value=1.7e-14  Score=73.72  Aligned_cols=68  Identities=28%  Similarity=0.391  Sum_probs=59.2

Q ss_pred             CCCceeeEeeEEeeC----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhh--------hCCCC
Q 039179            1 QHQNIVKLYGFCLHK----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLH--------HHCTP   68 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--------~~~~~   68 (75)
                      +||||+++++.+...    ...++++|++.+|++..++... .   ++......++.+++.|+.|+|        ..   
T Consensus        60 ~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~---~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---  132 (301)
T 3q4u_A           60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-T---LDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---  132 (301)
T ss_dssp             CCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC-C---BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---
T ss_pred             cCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc-c---cCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---
Confidence            599999999987653    4588999999999999999542 2   888899999999999999999        77   


Q ss_pred             CeEeccC
Q 039179           69 SIIYRDI   75 (75)
Q Consensus        69 ~i~hrdl   75 (75)
                      +++||||
T Consensus       133 ~ivH~Dl  139 (301)
T 3q4u_A          133 AIAHRDL  139 (301)
T ss_dssp             EEECSCC
T ss_pred             CeecCCC
Confidence            9999997

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.58  E-value=1.6e-14  Score=74.67  Aligned_cols=68  Identities=25%  Similarity=0.338  Sum_probs=59.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+. .++++|++.++++...+.....   ++......++.+++.|+.|+|..   +++||||
T Consensus        73 ~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dl  140 (322)
T 2ycf_A           73 NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHEN---GIIHRDL  140 (322)
T ss_dssp             CCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            5899999999987654 8999999999999988865433   88888999999999999999999   9999996

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.58  E-value=5.5e-15  Score=76.14  Aligned_cols=70  Identities=23%  Similarity=0.440  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..+...++++|++.++++..++.....  .++...+..++.+++.|+.|+|..   +++|||+
T Consensus        87 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl  156 (319)
T 2y4i_B           87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHAK---GILHKDL  156 (319)
T ss_dssp             CCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCC--CCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CccccCC
Confidence            489999999999999999999999999999999876432  278888999999999999999999   9999996

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.58  E-value=6.7e-15  Score=76.24  Aligned_cols=69  Identities=25%  Similarity=0.426  Sum_probs=60.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++. +...++++|++.+|++...+....  ..+++..+..++.+++.|+.|+|..   +++||||
T Consensus        73 ~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Di  141 (325)
T 3kex_A           73 DHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNL  141 (325)
T ss_dssp             CCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCcc
Confidence            5999999999886 466889999999999999987532  2378888999999999999999999   9999996

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.58  E-value=3.4e-15  Score=80.35  Aligned_cols=70  Identities=26%  Similarity=0.488  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.. +..++++|++.+|+|.+++..... ..++...+..++.+++.|+.|||..   +++||||
T Consensus       237 ~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDl  306 (452)
T 1fmk_A          237 RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL  306 (452)
T ss_dssp             CCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence            59999999999875 678999999999999999975211 1278888999999999999999999   9999997

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.58  E-value=2.1e-14  Score=74.52  Aligned_cols=69  Identities=20%  Similarity=0.417  Sum_probs=60.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+. .+++++++.+|++..++.....  .++...+..++.+++.|+.|||..   +++||||
T Consensus        75 ~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Di  143 (327)
T 3poz_A           75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL  143 (327)
T ss_dssp             CBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCC
Confidence            5899999999998754 7789999999999999876433  288888999999999999999999   9999996

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.58  E-value=9.6e-15  Score=77.15  Aligned_cols=70  Identities=23%  Similarity=0.495  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEee-CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.. ++..++++|++.+|++..++.....  .++...+..++.|++.|+.|||..   +++||||
T Consensus       148 ~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl  218 (373)
T 3c1x_A          148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDL  218 (373)
T ss_dssp             CCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCcc
Confidence            58999999998764 4578999999999999999976432  277888889999999999999999   9999997

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.58  E-value=2.4e-14  Score=73.03  Aligned_cols=69  Identities=23%  Similarity=0.454  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++ ..+..++++|++.++++..++.....  .++...+..++.+++.|+.++|..   +++|||+
T Consensus        68 ~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  136 (287)
T 1u59_A           68 DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEK---NFVHRDL  136 (287)
T ss_dssp             CCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCc--cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCC
Confidence            589999999998 45678999999999999999865322  288889999999999999999999   9999996

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.58  E-value=1.7e-14  Score=75.19  Aligned_cols=71  Identities=24%  Similarity=0.463  Sum_probs=61.2

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++++..    +...++++|++.+|++..++..... ..++...+..++.+++.|+.|||..   +++||||
T Consensus        80 ~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dl  154 (336)
T 3fhr_A           80 GGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV  154 (336)
T ss_dssp             TSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            48999999999876    3458999999999999999976432 2388999999999999999999999   9999996

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.58  E-value=3.6e-15  Score=76.22  Aligned_cols=70  Identities=30%  Similarity=0.500  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++...  ...++++|+++++++..++.....  .++...+..++.+++.|+.|||..   +++|||+
T Consensus        69 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Di  140 (295)
T 3ugc_A           69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDL  140 (295)
T ss_dssp             CCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCC
Confidence            589999999998653  458999999999999999876432  278888999999999999999999   9999996

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.58  E-value=1e-14  Score=74.74  Aligned_cols=68  Identities=24%  Similarity=0.367  Sum_probs=59.0

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..  ....++++|++.++++...... .   .++...+..++.|++.|+.|+|..   +++||||
T Consensus        94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl  163 (298)
T 2zv2_A           94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-K---PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI  163 (298)
T ss_dssp             CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-S---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-C---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            58999999999986  5678999999999988765432 2   288889999999999999999999   9999996

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.58  E-value=2.9e-14  Score=73.14  Aligned_cols=68  Identities=29%  Similarity=0.440  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+..+...++++|++.++++..++...    .++......++.+++.++.++|..   +++|+|+
T Consensus        78 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  145 (303)
T 3a7i_A           78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDI  145 (303)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCC
Confidence            5899999999999999999999999999999988642    288889999999999999999999   9999996

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.58  E-value=8.7e-15  Score=76.10  Aligned_cols=72  Identities=26%  Similarity=0.330  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------------------------------cccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------------------------------ALEL   43 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------------------------------~~~~   43 (75)
                      +||||+++++++.+++..++++|++++|++...+.....                                     ...+
T Consensus        86 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (345)
T 3hko_A           86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQ  165 (345)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHH
T ss_pred             CCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccc
Confidence            589999999999999999999999999999998852100                                     0112


Q ss_pred             CHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           44 NWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        44 ~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +...+..++.+++.|+.|||..   +++||||
T Consensus       166 ~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl  194 (345)
T 3hko_A          166 REKLISNIMRQIFSALHYLHNQ---GICHRDI  194 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            4556677899999999999999   9999996

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.58  E-value=1e-14  Score=75.50  Aligned_cols=72  Identities=29%  Similarity=0.435  Sum_probs=63.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC----cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE----ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+...++++|+++++++..++.....    ...+....+..++.+++.|+.|||..   +++||||
T Consensus        91 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dl  166 (327)
T 2yfx_A           91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDI  166 (327)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcC
Confidence            589999999999998899999999999999999976431    12367788899999999999999999   9999996

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.57  E-value=4.5e-14  Score=72.98  Aligned_cols=68  Identities=25%  Similarity=0.464  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+.  ...++++|+++++++..++....    ++...+..++.+++.++.+||..   +++|||+
T Consensus        91 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Di  160 (318)
T 3lxp_A           91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDL  160 (318)
T ss_dssp             CCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCC
Confidence            489999999999874  57899999999999999986532    78889999999999999999999   9999996

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.57  E-value=2.2e-14  Score=73.12  Aligned_cols=69  Identities=25%  Similarity=0.444  Sum_probs=62.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..+...++++|++.++++...+.....   ++...+..++.+++.++.+||..   +++|+|+
T Consensus        79 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl  147 (287)
T 2wei_A           79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKH---NIVHRDL  147 (287)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             cCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            589999999999999999999999999999888865443   88889999999999999999999   9999996

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.57  E-value=2.4e-14  Score=73.07  Aligned_cols=69  Identities=29%  Similarity=0.474  Sum_probs=60.5

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCC--eEecc
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPS--IIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~--i~hrd   74 (75)
                      +||||+++++++..    ....++++|+++++++..++.....   ++...+..++.+++.|+.|||..   +  ++|||
T Consensus        83 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~d  156 (290)
T 1t4h_A           83 QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLHTR---TPPIIHRD  156 (290)
T ss_dssp             CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSC
T ss_pred             CCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccC---CCHHHHHHHHHHHHHHHHHHHcC---CCCEEECC
Confidence            58999999998865    3468999999999999999976433   78888999999999999999998   7  99999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       157 i  157 (290)
T 1t4h_A          157 L  157 (290)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.57  E-value=2.8e-14  Score=74.08  Aligned_cols=68  Identities=25%  Similarity=0.370  Sum_probs=61.0

Q ss_pred             CCCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhh--------hCCCC
Q 039179            1 QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLH--------HHCTP   68 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--------~~~~~   68 (75)
                      +||||+++++.+..+.    ..++++|++.+|++..++... .   ++......++.+++.|+.|+|        ..   
T Consensus        94 ~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~---~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---  166 (342)
T 1b6c_B           94 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-T---VTVEGMIKLALSTASGLAHLHMEIVGTQGKP---  166 (342)
T ss_dssp             CCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC-C---BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---
T ss_pred             CCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc-C---ccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---
Confidence            5999999999998775    789999999999999999753 2   888899999999999999999        77   


Q ss_pred             CeEeccC
Q 039179           69 SIIYRDI   75 (75)
Q Consensus        69 ~i~hrdl   75 (75)
                      +++||||
T Consensus       167 ~ivH~Dl  173 (342)
T 1b6c_B          167 AIAHRDL  173 (342)
T ss_dssp             EEECSCC
T ss_pred             CeeeCCC
Confidence            9999996

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.57  E-value=1.6e-14  Score=74.93  Aligned_cols=69  Identities=25%  Similarity=0.441  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++.++++.........   ++...+..++.+++.|+.|||..   +++||||
T Consensus        82 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dl  150 (331)
T 4aaa_A           82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSH---NIIHRDI  150 (331)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHHC---CEEccCc
Confidence            589999999999999999999999999888877654333   88899999999999999999999   9999996

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.57  E-value=2.2e-14  Score=73.22  Aligned_cols=69  Identities=23%  Similarity=0.398  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++.+ ++...+.....  .++...+..++.|++.|+.|+|..   +++|||+
T Consensus        58 ~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  126 (288)
T 1ob3_A           58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDL  126 (288)
T ss_dssp             CCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            589999999999999999999999975 88888765322  278888899999999999999999   9999996

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.57  E-value=6.8e-15  Score=75.92  Aligned_cols=72  Identities=21%  Similarity=0.372  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------cccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEec
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------ALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hr   73 (75)
                      +|+||+++++.+..++..++++|++.+|++..++.....       ...++...+..++.+++.|+.|+|..   +++||
T Consensus        86 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~  162 (322)
T 1p4o_A           86 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHR  162 (322)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCS
T ss_pred             CCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccC
Confidence            589999999999998999999999999999999875211       01257788899999999999999999   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      |+
T Consensus       163 di  164 (322)
T 1p4o_A          163 DL  164 (322)
T ss_dssp             CC
T ss_pred             CC
Confidence            96

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.57  E-value=2.6e-14  Score=72.54  Aligned_cols=71  Identities=24%  Similarity=0.469  Sum_probs=60.2

Q ss_pred             CCCceeeEeeEEee----------------CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh
Q 039179            1 QHQNIVKLYGFCLH----------------KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH   64 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----------------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~   64 (75)
                      +|||++++++++..                ....++++|+++++++.+++..... ..++...+..++.+++.|+.|+|.
T Consensus        62 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~  140 (284)
T 2a19_B           62 DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-EKLDKVLALELFEQITKGVDYIHS  140 (284)
T ss_dssp             CCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGG-SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence            58999999998754                3457999999999999999865321 227888899999999999999999


Q ss_pred             CCCCCeEeccC
Q 039179           65 HCTPSIIYRDI   75 (75)
Q Consensus        65 ~~~~~i~hrdl   75 (75)
                      .   +++|+|+
T Consensus       141 ~---~i~H~dl  148 (284)
T 2a19_B          141 K---KLINRDL  148 (284)
T ss_dssp             T---TEECSCC
T ss_pred             C---CeeeccC
Confidence            9   9999996

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.56  E-value=3.5e-15  Score=81.72  Aligned_cols=70  Identities=26%  Similarity=0.488  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++.. +..++++|++.+|+|.+++..... ..+....+..++.+++.||.|||..   +++||||
T Consensus       320 ~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDl  389 (535)
T 2h8h_A          320 RHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL  389 (535)
T ss_dssp             CCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence            59999999998875 678999999999999999975211 1278888999999999999999999   9999997

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.56  E-value=1.6e-14  Score=73.73  Aligned_cols=70  Identities=21%  Similarity=0.410  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeE-EEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCM-FAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~-~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++.. ++++|++.++++..++.....  .++...+..++.+++.|+.|||..   +++|||+
T Consensus        80 ~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~di  150 (298)
T 3pls_A           80 NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR--NPTVKDLISFGLQVARGMEYLAEQ---KFVHRDL  150 (298)
T ss_dssp             CCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            599999999999876654 899999999999999976332  278888899999999999999999   9999996

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.56  E-value=2.4e-14  Score=75.03  Aligned_cols=69  Identities=25%  Similarity=0.450  Sum_probs=60.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++. |++...+.....  .+++..+..++.+++.|+.|+|..   +++||||
T Consensus       112 ~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl  180 (348)
T 1u5q_A          112 RHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDV  180 (348)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCC
Confidence            58999999999999999999999997 677777654322  288888999999999999999999   9999996

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.56  E-value=4e-14  Score=73.39  Aligned_cols=69  Identities=23%  Similarity=0.366  Sum_probs=60.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++|++. |++...+.....  .++...+..++.+++.|+.|+|..   +++|||+
T Consensus        58 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Di  126 (324)
T 3mtl_A           58 KHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDL  126 (324)
T ss_dssp             CCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSC
T ss_pred             CCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCc
Confidence            48999999999999999999999997 588888765432  278888899999999999999999   9999996

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.56  E-value=3.8e-14  Score=73.43  Aligned_cols=70  Identities=19%  Similarity=0.347  Sum_probs=61.0

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..  ....++++|+++++++..++.....  .++...+..++.+++.++.|||..   +++|||+
T Consensus        82 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Di  153 (327)
T 3lxl_A           82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR---RCVHRDL  153 (327)
T ss_dssp             CCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCC
Confidence            58999999998874  4568999999999999999876322  288889999999999999999999   9999996

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.56  E-value=8e-14  Score=71.21  Aligned_cols=69  Identities=20%  Similarity=0.224  Sum_probs=61.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|++++++++++..+...++++|++ ++++.+++.....  .++...+..++.|++.|+.|+|..   +++||||
T Consensus        64 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dl  132 (298)
T 1csn_A           64 GCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDI  132 (298)
T ss_dssp             TCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCC
T ss_pred             cCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence            4789999999999999999999999 9999999976432  288899999999999999999999   9999997

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.56  E-value=1.6e-14  Score=73.87  Aligned_cols=70  Identities=24%  Similarity=0.507  Sum_probs=60.4

Q ss_pred             CCCceeeEeeEEee-CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.. ++..++++|++.++++..++.....  .++......++.+++.|+.|+|..   +++|||+
T Consensus        84 ~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~di  154 (298)
T 3f66_A           84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDL  154 (298)
T ss_dssp             CCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCC
Confidence            48999999998654 5578999999999999999975332  277888899999999999999999   9999996

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.55  E-value=1.2e-14  Score=75.68  Aligned_cols=71  Identities=25%  Similarity=0.371  Sum_probs=61.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHH------hhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEec
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCV------LHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hr   73 (75)
                      +||||+++++++..++..++++|+++++++..+      +.... ...++...+..++.+++.|+.|+|. .   +++||
T Consensus       101 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~  176 (348)
T 2pml_X          101 KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHR  176 (348)
T ss_dssp             CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECC
T ss_pred             CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeec
Confidence            589999999999999999999999999999887      54321 2238888999999999999999998 8   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      |+
T Consensus       177 dl  178 (348)
T 2pml_X          177 DV  178 (348)
T ss_dssp             CC
T ss_pred             CC
Confidence            96

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.55  E-value=5.3e-14  Score=72.74  Aligned_cols=71  Identities=20%  Similarity=0.369  Sum_probs=60.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC---CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN---EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++. +++..++....   ....++...+..++.|++.|+.|||..   +++||||
T Consensus        61 ~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dl  134 (317)
T 2pmi_A           61 KHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDL  134 (317)
T ss_dssp             CBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCC
Confidence            58999999999999999999999998 68888876421   112377888889999999999999999   9999996

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.55  E-value=2.8e-14  Score=79.76  Aligned_cols=69  Identities=28%  Similarity=0.388  Sum_probs=60.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++. ++..++++|++.+|++..++.....  .++......++.+++.|+.|||..   +++||||
T Consensus       449 ~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDi  517 (656)
T 2j0j_A          449 DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF--SLDLASLILYAYQLSTALAYLESK---RFVHRDI  517 (656)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---Ccccccc
Confidence            5999999999885 4668999999999999999875432  278888899999999999999999   9999997

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.55  E-value=4.2e-14  Score=72.73  Aligned_cols=72  Identities=17%  Similarity=0.267  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..++..++++|++.++++..++... .....++...+..++.+++.|+.|+|..   +++|+||
T Consensus        90 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl  162 (310)
T 2wqm_A           90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDI  162 (310)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCC
Confidence            5899999999999999999999999999999988641 1112278888899999999999999999   9999996

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.55  E-value=3e-14  Score=73.63  Aligned_cols=71  Identities=25%  Similarity=0.430  Sum_probs=61.5

Q ss_pred             CCCceeeEeeEEee------CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLH------KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+||+++++.+..      ....++++|++.++++..++..... ..++...+..++.+++.|+.|+|..   +++|+|
T Consensus        79 ~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d  154 (326)
T 2x7f_A           79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQH---KVIHRD  154 (326)
T ss_dssp             CSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred             CCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccC
Confidence            48999999999987      4578999999999999999876321 2378888899999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       155 l  155 (326)
T 2x7f_A          155 I  155 (326)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.55  E-value=3.5e-14  Score=72.47  Aligned_cols=70  Identities=33%  Similarity=0.550  Sum_probs=59.8

Q ss_pred             CCCceeeEeeEEee-------------CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLH-------------KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-------------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +|||++++++.+..             +...++++|+++++++.+++.....  .++......++.+++.|+.|||..  
T Consensus        60 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~--  135 (303)
T 1zy4_A           60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL--NQQRDEYWRLFRQILEALSYIHSQ--  135 (303)
T ss_dssp             CCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCG--GGCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhcccc--ccchHHHHHHHHHHHHHHHHHHhC--
Confidence            58999999998865             3568999999999999999975332  267778888999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       136 -~i~H~dl  142 (303)
T 1zy4_A          136 -GIIHRDL  142 (303)
T ss_dssp             -TCCCSCC
T ss_pred             -CeecccC
Confidence             9999996

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.54  E-value=3.8e-14  Score=73.03  Aligned_cols=72  Identities=21%  Similarity=0.400  Sum_probs=60.8

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..    ....++++|++.++++..++... .....++...+..++.+++.|+.|||..   +++||||
T Consensus        84 ~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dl  160 (317)
T 2buj_A           84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDL  160 (317)
T ss_dssp             CCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            58999999999873    34788999999999999988752 1122388889999999999999999999   9999996

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.54  E-value=5.3e-14  Score=72.89  Aligned_cols=70  Identities=30%  Similarity=0.482  Sum_probs=60.2

Q ss_pred             CCCceeeEeeEEeeCC--eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK--CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~--~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+...+  ..++++|+++++++..++.....  .++...+..++.+++.|+.+||..   +++||||
T Consensus       100 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~di  171 (326)
T 2w1i_A          100 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDL  171 (326)
T ss_dssp             CCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCC
Confidence            4899999999987654  68999999999999999976432  278888999999999999999999   9999996

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.54  E-value=4.2e-14  Score=73.25  Aligned_cols=71  Identities=32%  Similarity=0.566  Sum_probs=60.3

Q ss_pred             CCCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCC-------CCC
Q 039179            1 QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHC-------TPS   69 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-------~~~   69 (75)
                      +||||+++++++..+.    ..++++||+++|++..++....    +++..+..++.+++.|+.|||...       .++
T Consensus        76 ~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~  151 (322)
T 3soc_A           76 KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA  151 (322)
T ss_dssp             CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE
T ss_pred             CCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCC
Confidence            5999999999998754    4799999999999999997532    888899999999999999999741       237


Q ss_pred             eEeccC
Q 039179           70 IIYRDI   75 (75)
Q Consensus        70 i~hrdl   75 (75)
                      ++||||
T Consensus       152 ivH~Dl  157 (322)
T 3soc_A          152 ISHRDI  157 (322)
T ss_dssp             EECSCC
T ss_pred             EEeCCC
Confidence            999996

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.54  E-value=2.5e-14  Score=76.77  Aligned_cols=69  Identities=14%  Similarity=0.247  Sum_probs=58.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.++...++++|++. |++..++......  ........++.|++.|+.|||..   +++||||
T Consensus        76 ~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl  144 (432)
T 3p23_A           76 EHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFA--HLGLEPITLLQQTTSGLAHLHSL---NIVHRDL  144 (432)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCC--CCSSCHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCC--ccchhHHHHHHHHHHHHHHHHHC---cCEeCCC
Confidence            59999999999999999999999996 6898888754321  44445678899999999999999   9999997

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=1.1e-13  Score=71.76  Aligned_cols=71  Identities=27%  Similarity=0.403  Sum_probs=61.6

Q ss_pred             CCCceeeEeeEEeeC----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCC-----CCCeE
Q 039179            1 QHQNIVKLYGFCLHK----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHC-----TPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-----~~~i~   71 (75)
                      +|+||+++++.+...    ...++++|++.+|++..++... .   ++...+..++.+++.|+.|+|...     .++++
T Consensus        89 ~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~---~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~iv  164 (337)
T 3mdy_A           89 RHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-T---LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA  164 (337)
T ss_dssp             CCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC-C---BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEE
T ss_pred             cCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc-C---CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEE
Confidence            589999999999887    6899999999999999999653 2   888899999999999999999641     33799


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      ||||
T Consensus       165 H~Di  168 (337)
T 3mdy_A          165 HRDL  168 (337)
T ss_dssp             CSCC
T ss_pred             eccc
Confidence            9996

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.54  E-value=4.7e-14  Score=74.84  Aligned_cols=67  Identities=18%  Similarity=0.350  Sum_probs=60.2

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+||+++++++..++..++++| +.++++..++.....   +.......++.|++.|+.|+|..   +|+||||
T Consensus       115 ~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDl  181 (390)
T 2zmd_A          115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQH---GIVHSDL  181 (390)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSS---CCHHHHHHHHHHHHHHHHHHHTT---TCCCCCC
T ss_pred             CCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeecCC
Confidence            6999999999999999999999 678899999876443   78888899999999999999999   9999997

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.54  E-value=2.4e-14  Score=73.94  Aligned_cols=72  Identities=25%  Similarity=0.455  Sum_probs=59.3

Q ss_pred             CCCceeeEeeEEeeCCeE------EEEEecCCCCCHHHHhhccC---CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeE
Q 039179            1 QHQNIVKLYGFCLHKKCM------FAIYKYMERGSLCCVLHKEN---EALELNWTNNVNIAKCVAHALSYLHHHCTPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~------~~~~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~   71 (75)
                      +||||+++++++......      ++++|++.+|++..++....   ....++...+..++.+++.|+.|||..   +++
T Consensus        83 ~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~iv  159 (323)
T 3qup_A           83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFI  159 (323)
T ss_dssp             CCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred             CCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---Ccc
Confidence            589999999999876654      89999999999999986422   111378888999999999999999999   999


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      |||+
T Consensus       160 H~Di  163 (323)
T 3qup_A          160 HRDL  163 (323)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            9996

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.53  E-value=2.1e-14  Score=74.00  Aligned_cols=73  Identities=33%  Similarity=0.515  Sum_probs=59.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.  +..++++||++++++..++........+.......++.+++.|+.|||.....+++|||+
T Consensus        59 ~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dl  131 (307)
T 2eva_A           59 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL  131 (307)
T ss_dssp             CCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCC
T ss_pred             CCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCC
Confidence            5999999999876  347899999999999999976443233677788889999999999999921128999996

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.53  E-value=8.4e-14  Score=70.92  Aligned_cols=68  Identities=25%  Similarity=0.537  Sum_probs=58.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCC--eEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPS--IIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~--i~hrdl   75 (75)
                      +|+||+++++.+.++.  ++++|++.++++...+.....  .++......++.+++.|+.|+|..   +  ++|||+
T Consensus        81 ~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~di  150 (287)
T 4f0f_A           81 NHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDL  150 (287)
T ss_dssp             CCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCC
T ss_pred             CCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccC--CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCC
Confidence            5899999999987654  689999999999888865432  288889999999999999999998   8  999996

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.53  E-value=3.6e-14  Score=72.97  Aligned_cols=72  Identities=24%  Similarity=0.374  Sum_probs=60.8

Q ss_pred             CCCceeeEeeEEeeCC-eEEEEEecCCCCCHHHHhhccCCc-------------ccCCHHhHHHHHHHHHHHhhHhhhCC
Q 039179            1 QHQNIVKLYGFCLHKK-CMFAIYKYMERGSLCCVLHKENEA-------------LELNWTNNVNIAKCVAHALSYLHHHC   66 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~l~~~~   66 (75)
                      +||||+++++.+..++ ..++++|++.++++..++......             ..++...+..++.+++.|+.|+|.. 
T Consensus        89 ~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-  167 (316)
T 2xir_A           89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-  167 (316)
T ss_dssp             CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             cCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-
Confidence            4899999999988754 589999999999999999764321             1156778889999999999999999 


Q ss_pred             CCCeEeccC
Q 039179           67 TPSIIYRDI   75 (75)
Q Consensus        67 ~~~i~hrdl   75 (75)
                        +++|||+
T Consensus       168 --~i~H~di  174 (316)
T 2xir_A          168 --KCIHRDL  174 (316)
T ss_dssp             --TCCCSCC
T ss_pred             --CcccccC
Confidence              9999996

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.53  E-value=6.2e-14  Score=72.82  Aligned_cols=69  Identities=20%  Similarity=0.417  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+. .+++++++.+|++..++.....  .++...+..++.|++.|+.|+|..   +++||||
T Consensus        75 ~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di  143 (327)
T 3lzb_A           75 DNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL  143 (327)
T ss_dssp             CBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCC
Confidence            5899999999998754 7889999999999999876433  288888999999999999999999   9999996

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.53  E-value=1.8e-13  Score=70.82  Aligned_cols=66  Identities=17%  Similarity=0.193  Sum_probs=59.3

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .|+||+++++.+..  ....++++|++.++++...+..      ++...+..++.+++.|+.|||..   +++||||
T Consensus        89 ~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Di  156 (330)
T 3nsz_A           89 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDV  156 (330)
T ss_dssp             TSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCC
Confidence            38999999999987  5678999999999999888753      77888899999999999999999   9999997

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.53  E-value=2.7e-14  Score=79.95  Aligned_cols=67  Identities=25%  Similarity=0.429  Sum_probs=56.8

Q ss_pred             CCCceeeEeeEEeeCCe-----EEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKC-----MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~-----~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++...+.     .++++||+.++++...+..     .+++..+..++.+++.++.|+|..   +|+||||
T Consensus       137 ~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDl  208 (681)
T 2pzi_A          137 VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDL  208 (681)
T ss_dssp             CCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccc
Confidence            59999999999987654     7999999999999876643     288899999999999999999999   9999997

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.53  E-value=1.8e-13  Score=70.36  Aligned_cols=70  Identities=21%  Similarity=0.402  Sum_probs=59.9

Q ss_pred             CCCceeeEeeEEeeCC-----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK-----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++....     ..++++|++. +++..++..... ..+++..+..++.+++.|+.|||..   +++|||+
T Consensus        72 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dl  146 (308)
T 3g33_A           72 EHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDL  146 (308)
T ss_dssp             CCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            4999999999998754     4789999997 699888876433 2278889999999999999999999   9999996

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.52  E-value=9.6e-14  Score=71.00  Aligned_cols=70  Identities=17%  Similarity=0.319  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++|++. +++..++..... ..++...+..++.+++.|+.|+|..   +++|||+
T Consensus        60 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  129 (299)
T 2r3i_A           60 NHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDL  129 (299)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCC
Confidence            58999999999999999999999997 688888865432 2278888899999999999999999   9999996

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.52  E-value=6.6e-16  Score=80.24  Aligned_cols=54  Identities=11%  Similarity=0.110  Sum_probs=46.1

Q ss_pred             CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhh-hCCCCCeEeccC
Q 039179           15 KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLH-HHCTPSIIYRDI   75 (75)
Q Consensus        15 ~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~hrdl   75 (75)
                      ++..++++||+.+|++...+.. .   .++...+..++.|++.|+.|+| ..   +|+||||
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~~-~---~~~~~~~~~i~~qi~~aL~~lH~~~---~ivHrDl  188 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMRT-K---LSSLATAKSILHQLTASLAVAEASL---RFEHRDL  188 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGTT-T---CCCHHHHHHHHHHHHHHHHHHHHHH---CCBCSCC
T ss_pred             cCeEEEEEEecCCCccHHHHHh-c---CCCHHHHHHHHHHHHHHHHHHHHhC---CEeECCC
Confidence            6789999999999976555543 2   2788999999999999999999 88   9999997

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.52  E-value=9e-14  Score=70.68  Aligned_cols=69  Identities=26%  Similarity=0.359  Sum_probs=59.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.. +..++++|++.++++..++.....  .++......++.+++.|+.|+|..   +++|||+
T Consensus        71 ~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  139 (281)
T 3cc6_A           71 DHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLESI---NCVHRDI  139 (281)
T ss_dssp             CCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            58999999998765 456899999999999999876432  278888899999999999999999   9999996

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.52  E-value=7.8e-14  Score=71.04  Aligned_cols=69  Identities=29%  Similarity=0.410  Sum_probs=60.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..+. .++++|++.++++...+.....  .++...+..++.+++.++.++|..   +++|+|+
T Consensus        79 ~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di  147 (291)
T 1u46_A           79 DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDL  147 (291)
T ss_dssp             CCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccC--CcCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence            5899999999998755 8899999999999999876322  278888999999999999999999   9999996

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.52  E-value=9.2e-14  Score=71.53  Aligned_cols=72  Identities=21%  Similarity=0.418  Sum_probs=59.4

Q ss_pred             CCCceeeEeeEEeeCC-----eEEEEEecCCCCCHHHHhhcc---CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLHKK-----CMFAIYKYMERGSLCCVLHKE---NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +||||+++++++....     ..++++|++.++++..++...   .....++...+..++.+++.|+.|||..   +++|
T Consensus        94 ~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH  170 (313)
T 3brb_A           94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLH  170 (313)
T ss_dssp             CCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCC
T ss_pred             CCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence            5899999999987754     358999999999999998432   1122378889999999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      ||+
T Consensus       171 ~di  173 (313)
T 3brb_A          171 RDL  173 (313)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            996

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.52  E-value=9e-14  Score=72.53  Aligned_cols=67  Identities=18%  Similarity=0.350  Sum_probs=60.3

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+||+++++++..+...++++| +.++++..++.....   +++..+..++.+++.|+.|+|..   +++||||
T Consensus        68 ~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~~---~iiHrDi  134 (343)
T 3dbq_A           68 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQH---GIVHSDL  134 (343)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHSCC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence            3899999999999999999999 567899999876443   88888999999999999999999   9999997

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.51  E-value=2.6e-14  Score=73.52  Aligned_cols=69  Identities=14%  Similarity=0.229  Sum_probs=57.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEec-CCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKY-MERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++..++++|+ +.++++.+++.....   ++...+..++.+++.|+.|+|..   +++|||+
T Consensus        96 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl  165 (312)
T 2iwi_A           96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVVAAIQHCHSR---GVVHRDI  165 (312)
T ss_dssp             CCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHH---TEECCCC
T ss_pred             CCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CeeecCC
Confidence            489999999999988889999999 788999999876443   88899999999999999999999   9999996

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.51  E-value=5.3e-14  Score=71.42  Aligned_cols=70  Identities=29%  Similarity=0.554  Sum_probs=59.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++++. .+..++++|++.++++.+++..... ..++...+..++.+++.|+.++|..   +++|||+
T Consensus        66 ~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~di  135 (279)
T 1qpc_A           66 QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL  135 (279)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHH-HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            5899999999876 4568899999999999999865321 1278888999999999999999999   9999996

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.51  E-value=1.3e-13  Score=72.88  Aligned_cols=67  Identities=24%  Similarity=0.439  Sum_probs=58.0

Q ss_pred             CCCceeeEeeEEeeCC--eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK--CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~--~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++..++  ..++++|++. +++...+... .   +.......++.|++.|+.|+|+.   +++||||
T Consensus        67 ~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~---~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDl  135 (388)
T 3oz6_A           67 GHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN-I---LEPVHKQYVVYQLIKVIKYLHSG---GLLHRDM  135 (388)
T ss_dssp             TCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHHT-C---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHcC-C---CCHHHHHHHHHHHHHHHHHHHhC---CEEeCCC
Confidence            4999999999997644  6899999997 5888888652 2   78888889999999999999999   9999997

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.50  E-value=7.4e-14  Score=71.31  Aligned_cols=69  Identities=29%  Similarity=0.496  Sum_probs=58.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|+++++++. .....++++|++.++++...+.....  .++...+..++.+++.++.|+|..   +++|||+
T Consensus        78 ~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dl  146 (289)
T 3og7_A           78 RHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASET--KFEMKKLIDIARQTARGMDYLHAK---SIIHRDL  146 (289)
T ss_dssp             CCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence            589999999955 45668999999999999998865332  278888999999999999999999   9999996

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.50  E-value=8.3e-14  Score=74.72  Aligned_cols=71  Identities=20%  Similarity=0.306  Sum_probs=56.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCccc----CCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALE----LNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+.++...++++|++. |++.+++........    .....+..++.|++.|+.|||+.   +++||||
T Consensus        67 ~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDL  141 (434)
T 2rio_A           67 DHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDL  141 (434)
T ss_dssp             TSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCC
Confidence            59999999999999999999999995 699999875332100    12224567899999999999999   9999997

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.50  E-value=1.3e-13  Score=73.91  Aligned_cols=68  Identities=16%  Similarity=0.288  Sum_probs=59.7

Q ss_pred             CCCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+...     ...++++|++. +++...+.....   ++...+..++.|++.|+.|||+.   +++||||
T Consensus        83 ~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~---l~~~~~~~i~~qil~aL~~LH~~---givHrDl  155 (432)
T 3n9x_A           83 KSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIF---LTEEHIKTILYNLLLGENFIHES---GIIHRDL  155 (432)
T ss_dssp             CCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CCCCCCC
Confidence            589999999999776     56899999986 699888876433   88999999999999999999999   9999997

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.50  E-value=2e-13  Score=70.53  Aligned_cols=70  Identities=21%  Similarity=0.449  Sum_probs=59.5

Q ss_pred             CCCceeeEeeEEe-----eCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCL-----HKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~-----~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.     .....++++|++. |++..++...... .++...+..++.+++.|+.|+|..   +++|||+
T Consensus        72 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dl  146 (326)
T 1blx_A           72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDL  146 (326)
T ss_dssp             CCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTT-CSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccC
Confidence            4999999999987     4467899999997 6998888764322 278889999999999999999999   9999996

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.50  E-value=7.3e-14  Score=72.95  Aligned_cols=69  Identities=26%  Similarity=0.396  Sum_probs=60.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++......++++|++.+ ++...+.....  .++...+..++.+++.|+.|+|..   +++||||
T Consensus        70 ~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl  138 (346)
T 1ua2_A           70 SHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDL  138 (346)
T ss_dssp             CCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHC---CEECCCC
Confidence            489999999999999999999999985 78777765332  277888899999999999999999   9999996

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.49  E-value=8.2e-14  Score=74.97  Aligned_cols=68  Identities=15%  Similarity=0.283  Sum_probs=58.6

Q ss_pred             CCCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++...     ...++++|++ ++++...+.....   ++...+..++.|++.|+.|||..   +++||||
T Consensus       110 ~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDl  182 (458)
T 3rp9_A          110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVY---LTELHIKTLLYNLLVGVKYVHSA---GILHRDL  182 (458)
T ss_dssp             CCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSSCC---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCCCCceEEEEecCCcccCceEEEEEecc-ccchhhhcccCCC---CCHHHHHHHHHHHHHHHHHHHhC---CcCCCCC
Confidence            599999999998543     4689999987 4788888876433   88999999999999999999999   9999997

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.49  E-value=2.7e-13  Score=70.22  Aligned_cols=68  Identities=16%  Similarity=0.185  Sum_probs=61.5

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCC-CCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMER-GSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+|++++++.+..++..++++|++.+ +++..++.....   ++...+..++.|++.|+.|+|..   +++||||
T Consensus       107 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl  175 (320)
T 3a99_A          107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCHNC---GVLHRDI  175 (320)
T ss_dssp             SCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CcEeCCC
Confidence            69999999999999999999999976 899998876443   88888999999999999999999   9999996

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.48  E-value=7.4e-13  Score=68.48  Aligned_cols=69  Identities=12%  Similarity=0.236  Sum_probs=60.1

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |++++++++.+...+..++++|++ ++++...+..... ..++...+..++.|++.|+.|+|..   +++|||+
T Consensus        76 ~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl  144 (339)
T 1z57_A           76 TFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDL  144 (339)
T ss_dssp             TTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             ceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCC
Confidence            456999999999999999999999 8899988876432 2278888999999999999999999   9999996

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.48  E-value=8.2e-14  Score=70.67  Aligned_cols=72  Identities=26%  Similarity=0.441  Sum_probs=59.7

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCCCCC-----eEe
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHCTPS-----IIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-----i~h   72 (75)
                      +||||+++++.+..  +...++++|+++++++..++.... ....+++..+..++.+++.|+.|+|..   +     ++|
T Consensus        63 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH  139 (279)
T 2w5a_A           63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLH  139 (279)
T ss_dssp             CCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CC
T ss_pred             CCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEE
Confidence            58999999998854  568999999999999999987521 112278888999999999999999998   7     999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      |||
T Consensus       140 ~dl  142 (279)
T 2w5a_A          140 RDL  142 (279)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            996

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.48  E-value=1.2e-13  Score=73.39  Aligned_cols=72  Identities=19%  Similarity=0.220  Sum_probs=55.0

Q ss_pred             CCCceeeEeeEEeeCCe------EEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKKC------MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~------~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+||+++++++...+.      .++++||+.++.+............++...+..++.|++.|+.|+|..   +++|||
T Consensus        90 ~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrD  166 (394)
T 4e7w_A           90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRD  166 (394)
T ss_dssp             CCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred             CCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCC
Confidence            59999999999865443      789999998754433322111112278888999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       167 l  167 (394)
T 4e7w_A          167 I  167 (394)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.48  E-value=2.7e-13  Score=69.47  Aligned_cols=70  Identities=23%  Similarity=0.379  Sum_probs=55.7

Q ss_pred             CCCceeeEeeEEe--eCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCL--HKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~--~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++.  .....++++|++.++ +...+..... ..++......++.+++.|+.|+|..   +++|||+
T Consensus        64 ~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl  135 (305)
T 2wtk_C           64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDI  135 (305)
T ss_dssp             CCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTT-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcc-cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCC
Confidence            5899999999984  345789999999876 5555554222 2388888999999999999999999   9999996

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.48  E-value=4.9e-13  Score=71.73  Aligned_cols=70  Identities=14%  Similarity=0.241  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+......++++|++. +++...+...... .+++..+..++.|++.|+.|||..   +++||||
T Consensus       157 ~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDl  226 (429)
T 3kvw_A          157 NTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQ-GFSLPLVRKFAHSILQCLDALHKN---RIIHCDL  226 (429)
T ss_dssp             SCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHH---TEECSCC
T ss_pred             CCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            37899999999999999999999996 6888888764322 278888999999999999999999   9999997

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.47  E-value=1.4e-13  Score=71.22  Aligned_cols=71  Identities=23%  Similarity=0.281  Sum_probs=57.9

Q ss_pred             CCCceeeEeeEEee--------CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCC--e
Q 039179            1 QHQNIVKLYGFCLH--------KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPS--I   70 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~--i   70 (75)
                      +||||+++++++..        ....++++|++. |++..++........+++..+..++.+++.|+.|||..   +  +
T Consensus        84 ~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~i  159 (337)
T 3ll6_A           84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPI  159 (337)
T ss_dssp             TSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCC
T ss_pred             cCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCE
Confidence            49999999999843        345889999996 78888776522222388899999999999999999998   7  9


Q ss_pred             EeccC
Q 039179           71 IYRDI   75 (75)
Q Consensus        71 ~hrdl   75 (75)
                      +||||
T Consensus       160 vH~Di  164 (337)
T 3ll6_A          160 IHRDL  164 (337)
T ss_dssp             BCCCC
T ss_pred             EEccC
Confidence            99996

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.47  E-value=5.4e-14  Score=71.40  Aligned_cols=71  Identities=25%  Similarity=0.449  Sum_probs=59.6

Q ss_pred             CCCceeeEeeEEeeC-CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++.+... +..++++|++.++++.+++..... ..++...+..++.+++.++.++|..   +++|||+
T Consensus        72 ~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl  143 (278)
T 1byg_A           72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDL  143 (278)
T ss_dssp             CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCC
Confidence            589999999987654 478999999999999999875321 1267788889999999999999999   9999996

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.46  E-value=3.9e-13  Score=71.04  Aligned_cols=71  Identities=24%  Similarity=0.304  Sum_probs=56.3

Q ss_pred             CCCceeeEeeEEeeC--------------------------------------CeEEEEEecCCCCCHHHHhhcc-CCcc
Q 039179            1 QHQNIVKLYGFCLHK--------------------------------------KCMFAIYKYMERGSLCCVLHKE-NEAL   41 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--------------------------------------~~~~~~~e~~~~~~l~~~~~~~-~~~~   41 (75)
                      +|+||+++++++...                                      ...++++|+++ +++...+... ....
T Consensus        58 ~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~  136 (383)
T 3eb0_A           58 DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGR  136 (383)
T ss_dssp             CCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTC
T ss_pred             CCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCC
Confidence            599999999998543                                      23789999998 5766666531 1112


Q ss_pred             cCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           42 ELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        42 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .++...+..++.|++.|+.|||..   +++||||
T Consensus       137 ~l~~~~~~~i~~qi~~aL~~LH~~---gi~H~Di  167 (383)
T 3eb0_A          137 SIPMNLISIYIYQLFRAVGFIHSL---GICHRDI  167 (383)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTT---TEECSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHC---cCccCcc
Confidence            388889999999999999999999   9999996

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.46  E-value=4.9e-13  Score=69.84  Aligned_cols=69  Identities=22%  Similarity=0.507  Sum_probs=57.4

Q ss_pred             CCCceeeEeeEEeeC--------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLHK--------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +|+||+++++.+...        +..++++|++.+ ++...+.....  .++...+..++.|++.|+.|||..   +++|
T Consensus        74 ~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH  147 (351)
T 3mi9_A           74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIHRN---KILH  147 (351)
T ss_dssp             CCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred             cCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeC
Confidence            589999999999873        468999999975 66666654322  288899999999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      |||
T Consensus       148 ~Dl  150 (351)
T 3mi9_A          148 RDM  150 (351)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            997

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.46  E-value=3.9e-13  Score=69.27  Aligned_cols=67  Identities=18%  Similarity=0.350  Sum_probs=60.1

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+|++++++++..++..++++| +.++++.+++.....   ++......++.+++.|+.|+|..   +++||||
T Consensus        87 ~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dl  153 (313)
T 3cek_A           87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQH---GIVHSDL  153 (313)
T ss_dssp             CTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHC---CceecCC
Confidence            6899999999999999999999 668899999876443   78888899999999999999999   9999996

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.45  E-value=2e-13  Score=71.93  Aligned_cols=67  Identities=19%  Similarity=0.352  Sum_probs=58.4

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+||+++++++..+.      ..++++|++ ++++..++.. ..   ++...+..++.|++.|+.|+|..   +++|||
T Consensus        82 ~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~---l~~~~~~~~~~qi~~~L~~LH~~---~ivH~D  153 (367)
T 1cm8_A           82 RHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EK---LGEDRIQFLVYQMLKGLRYIHAA---GIIHRD  153 (367)
T ss_dssp             CBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred             CCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc-CC---CCHHHHHHHHHHHHHHHHHHHHC---CccccC
Confidence            5899999999997653      459999999 7899988865 22   88888999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       154 l  154 (367)
T 1cm8_A          154 L  154 (367)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.45  E-value=7.7e-14  Score=78.31  Aligned_cols=72  Identities=25%  Similarity=0.282  Sum_probs=62.0

Q ss_pred             CCCceeeEeeEEee------CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLH------KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +||||+++++++..      ++..++++||+.+|++..++........++...+..++.+++.|+.|+|..   +++|||
T Consensus        70 ~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrD  146 (676)
T 3qa8_A           70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRD  146 (676)
T ss_dssp             CBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCC
T ss_pred             CCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCC
Confidence            58999999998755      567899999999999999998644333478888899999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       147 L  147 (676)
T 3qa8_A          147 L  147 (676)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.45  E-value=3.2e-13  Score=70.03  Aligned_cols=71  Identities=27%  Similarity=0.462  Sum_probs=57.6

Q ss_pred             CCCceeeEeeEEee-----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCC------CCC
Q 039179            1 QHQNIVKLYGFCLH-----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHC------TPS   69 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~------~~~   69 (75)
                      +|+||+++++.+..     ....++++||+++|++..++....    .++.....++.+++.|+.|||...      .++
T Consensus        65 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~  140 (336)
T 3g2f_A           65 EHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA  140 (336)
T ss_dssp             CCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC
T ss_pred             cCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence            58999999886543     235789999999999999996533    577788889999999999999763      237


Q ss_pred             eEeccC
Q 039179           70 IIYRDI   75 (75)
Q Consensus        70 i~hrdl   75 (75)
                      ++||||
T Consensus       141 ivH~Di  146 (336)
T 3g2f_A          141 ISHRDL  146 (336)
T ss_dssp             EECSSC
T ss_pred             eeeccc
Confidence            999996

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.45  E-value=6.5e-13  Score=68.30  Aligned_cols=67  Identities=25%  Similarity=0.422  Sum_probs=57.1

Q ss_pred             CCCceeeEeeEEe--------------eCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCC
Q 039179            1 QHQNIVKLYGFCL--------------HKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHC   66 (75)
Q Consensus         1 ~h~~i~~~~~~~~--------------~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~   66 (75)
                      +|||++++++.+.              .....++++|++. |++...+.. ..   ++...+..++.+++.|+.|||.. 
T Consensus        66 ~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~---~~~~~~~~~~~qi~~~l~~lH~~-  139 (320)
T 2i6l_A           66 DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GP---LLEEHARLFMYQLLRGLKYIHSA-  139 (320)
T ss_dssp             CCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-CC---CCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhc-CC---ccHHHHHHHHHHHHHHHHHHHhC-
Confidence            5899999998873              3467899999997 689888854 22   78888899999999999999999 


Q ss_pred             CCCeEeccC
Q 039179           67 TPSIIYRDI   75 (75)
Q Consensus        67 ~~~i~hrdl   75 (75)
                        +++|||+
T Consensus       140 --~i~H~dl  146 (320)
T 2i6l_A          140 --NVLHRDL  146 (320)
T ss_dssp             --TCBCCCC
T ss_pred             --CEecCCC
Confidence              9999996

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.44  E-value=3.8e-13  Score=70.42  Aligned_cols=69  Identities=20%  Similarity=0.321  Sum_probs=57.7

Q ss_pred             CCCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++...     ...++++|++. |++...+.....  .++...+..++.+++.|+.|||..   +++|||+
T Consensus        87 ~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl  160 (362)
T 3pg1_A           87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI--VISPQHIQYFMYHILLGLHVLHEA---GVVHRDL  160 (362)
T ss_dssp             CCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---cCEecCC
Confidence            599999999998542     36899999998 677777765332  288889999999999999999999   9999996

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.43  E-value=2.6e-13  Score=71.00  Aligned_cols=66  Identities=23%  Similarity=0.313  Sum_probs=55.2

Q ss_pred             eeeEeeEEee-CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            5 IVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         5 i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +.++++.+.. +...++++|++ +++|.+++.... ...+++..+..++.|++.|+.|||..   +++||||
T Consensus       119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Di  185 (352)
T 2jii_A          119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNV  185 (352)
T ss_dssp             CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCC
T ss_pred             ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCC
Confidence            3346777766 67889999999 999999997641 12388999999999999999999999   9999996

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.43  E-value=6.5e-13  Score=67.62  Aligned_cols=72  Identities=22%  Similarity=0.256  Sum_probs=58.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhcc-CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++++..++..++++|++. |++...+... .....+++..+..++.+++.|+.|+|...  +++|||+
T Consensus        64 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dl  136 (290)
T 3fme_A           64 DCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDV  136 (290)
T ss_dssp             CCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCC
T ss_pred             CCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCC
Confidence            58999999999999999999999997 5776666431 11123888999999999999999999832  7999996

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.42  E-value=1e-12  Score=68.70  Aligned_cols=71  Identities=17%  Similarity=0.164  Sum_probs=54.4

Q ss_pred             CCCceeeEeeEEeeCCe-------EEEEEecCCCCCHHHHhhc-cCCcccCCHHhHHHHHHHHHHHhhHhh--hCCCCCe
Q 039179            1 QHQNIVKLYGFCLHKKC-------MFAIYKYMERGSLCCVLHK-ENEALELNWTNNVNIAKCVAHALSYLH--HHCTPSI   70 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~-------~~~~~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~~~~~i   70 (75)
                      +||||+++++++...+.       .++++|++.++ +...+.. ......++...+..++.+++.++.|+|  ..   ++
T Consensus        77 ~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~i  152 (360)
T 3e3p_A           77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NV  152 (360)
T ss_dssp             CCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CC
T ss_pred             CCCCcccHHHhhhccccccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---Ce
Confidence            59999999999976433       78999999864 4333322 112223778888899999999999999  88   99


Q ss_pred             EeccC
Q 039179           71 IYRDI   75 (75)
Q Consensus        71 ~hrdl   75 (75)
                      +||||
T Consensus       153 vH~Dl  157 (360)
T 3e3p_A          153 CHRDI  157 (360)
T ss_dssp             BCSCC
T ss_pred             ecCcC
Confidence            99997

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.42  E-value=8.2e-14  Score=73.47  Aligned_cols=71  Identities=17%  Similarity=0.185  Sum_probs=53.9

Q ss_pred             CCCceeeEe-------eEEeeCC-----------------eEEEEEecCCCCCHHHHhhccCC----cccCCHHhHHHHH
Q 039179            1 QHQNIVKLY-------GFCLHKK-----------------CMFAIYKYMERGSLCCVLHKENE----ALELNWTNNVNIA   52 (75)
Q Consensus         1 ~h~~i~~~~-------~~~~~~~-----------------~~~~~~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~   52 (75)
                      +||||++++       +.+..++                 ..++++|++ +|++.+++.....    ...+++.....++
T Consensus       134 ~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~  212 (377)
T 3byv_A          134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLT  212 (377)
T ss_dssp             CSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred             CCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHH
Confidence            488998887       5555443                 278999999 6899999875321    0112346777899


Q ss_pred             HHHHHHhhHhhhCCCCCeEeccC
Q 039179           53 KCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        53 ~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .|++.|+.|||+.   +++||||
T Consensus       213 ~qi~~aL~~LH~~---~ivHrDi  232 (377)
T 3byv_A          213 LQVIRLLASLHHY---GLVHTYL  232 (377)
T ss_dssp             HHHHHHHHHHHHT---TEECSCC
T ss_pred             HHHHHHHHHHHhC---CeecCCC
Confidence            9999999999999   9999997

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.41  E-value=1.4e-12  Score=68.75  Aligned_cols=66  Identities=26%  Similarity=0.438  Sum_probs=56.5

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +||||+++++++....      ..++++|++.+ ++...+..  .   ++...+..++.|++.|+.|+|..   +++|||
T Consensus        82 ~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~---~~~~~~~~i~~qi~~al~~lH~~---~ivH~D  152 (371)
T 2xrw_A           82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM--E---LDHERMSYLLYQMLCGIKHLHSA---GIIHRD  152 (371)
T ss_dssp             CCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHHS--C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred             CCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHhh--c---cCHHHHHHHHHHHHHHHHHHHHC---Ceeccc
Confidence            5899999999997654      68999999974 67777642  2   78888899999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       153 l  153 (371)
T 2xrw_A          153 L  153 (371)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.40  E-value=1.9e-12  Score=68.25  Aligned_cols=70  Identities=24%  Similarity=0.311  Sum_probs=55.5

Q ss_pred             CCceeeEeeEEe----eCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCL----HKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~----~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+||+++++.+.    .+...++++|++ ++++...+..... ..++...+..++.|++.|+.|||..+  +++||||
T Consensus       100 ~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDi  173 (397)
T 1wak_A          100 REMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNY-QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDI  173 (397)
T ss_dssp             GGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCC
T ss_pred             cceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCC
Confidence            788999999987    445789999999 4555555544321 22888999999999999999999853  7999997

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.40  E-value=1.2e-12  Score=68.21  Aligned_cols=67  Identities=21%  Similarity=0.315  Sum_probs=58.0

Q ss_pred             CCCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++.+..+     ...++++|++. +++...+... .   ++...+..++.+++.|+.|||..   +++|||+
T Consensus        67 ~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~---~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dl  138 (353)
T 2b9h_A           67 KHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQ-M---LSDDHIQYFIYQTLRAVKVLHGS---NVIHRDL  138 (353)
T ss_dssp             CCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHHC-C---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             cCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhhc-C---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            589999999988754     57899999997 6888887652 2   88889999999999999999999   9999996

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.40  E-value=1.1e-12  Score=67.52  Aligned_cols=69  Identities=19%  Similarity=0.262  Sum_probs=57.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++ ++.+.........  .++...+..++.+++.|+.|+|. .   +++|+||
T Consensus        82 ~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl  151 (318)
T 2dyl_A           82 DCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQG--PIPERILGKMTVAIVKALYYLKEKH---GVIHRDV  151 (318)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCC
T ss_pred             CCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCC
Confidence            5899999999999999999999999 4555555443222  27888899999999999999998 6   7999996

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.40  E-value=7.9e-13  Score=70.74  Aligned_cols=71  Identities=23%  Similarity=0.270  Sum_probs=54.2

Q ss_pred             CCCceeeEeeEEeeC------CeEEEEEecCCCCCHHHHhhc-cCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEec
Q 039179            1 QHQNIVKLYGFCLHK------KCMFAIYKYMERGSLCCVLHK-ENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~------~~~~~~~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hr   73 (75)
                      +|+||+++++++...      ...++++||+.+ ++...+.. ......++...+..++.|++.|+.|||..   +|+||
T Consensus       105 ~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHr  180 (420)
T 1j1b_A          105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHR  180 (420)
T ss_dssp             CCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECS
T ss_pred             CCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---Ccccc
Confidence            599999999988542      136789999985 55544432 11112288888999999999999999999   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      ||
T Consensus       181 Dl  182 (420)
T 1j1b_A          181 DI  182 (420)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.40  E-value=6.6e-12  Score=64.03  Aligned_cols=68  Identities=12%  Similarity=0.139  Sum_probs=55.0

Q ss_pred             CCcee-eEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIV-KLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~-~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |++++ .+..+...+...++++|++ ++++..++.....  .++...+..++.+++.|+.|+|..   +++||||
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl  131 (296)
T 4hgt_A           63 GGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSK---NFIHRDV  131 (296)
T ss_dssp             TSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            44444 4445556677889999999 8999999875332  288899999999999999999999   9999996

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.39  E-value=3.4e-13  Score=72.96  Aligned_cols=66  Identities=24%  Similarity=0.431  Sum_probs=55.0

Q ss_pred             CCCceeeEeeEEeeC------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +||||+++++++...      ...++++||+.++ +...+..  .   ++...+..++.|++.|+.|+|..   +++|||
T Consensus       119 ~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l~~~~~~--~---l~~~~~~~~~~qil~aL~~lH~~---~iiHrD  189 (464)
T 3ttj_A          119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQM--E---LDHERMSYLLYQMLCGIKHLHSA---GIIHRD  189 (464)
T ss_dssp             CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHHTS--C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred             CCCCCCcEEEEEccCCccccCCeEEEEEeCCCCC-HHHHHhh--c---CCHHHHHHHHHHHHHHHHHHHHC---CcccCC
Confidence            599999999999764      3579999999765 5555532  1   78888899999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       190 l  190 (464)
T 3ttj_A          190 L  190 (464)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.38  E-value=2.1e-12  Score=67.86  Aligned_cols=67  Identities=21%  Similarity=0.371  Sum_probs=57.9

Q ss_pred             CCCceeeEeeEEeeC-----CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..+     ...++++|++. +++...+... .   ++...+..++.+++.|+.|||..   +++||||
T Consensus        83 ~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~-~---~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di  154 (364)
T 3qyz_A           83 RHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ-H---LSNDHICYFLYQILRGLKYIHSA---NVLHRDL  154 (364)
T ss_dssp             CCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHC-C---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhC-C---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence            589999999999765     36899999997 5888887652 2   88889999999999999999999   9999996

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.38  E-value=1.1e-11  Score=63.23  Aligned_cols=68  Identities=13%  Similarity=0.157  Sum_probs=54.7

Q ss_pred             CCc-eeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQN-IVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~-i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |++ +..+..+...+...++++|++ ++++.+++.....  .++...+..++.+++.|+.|+|..   +++||||
T Consensus        63 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dl  131 (296)
T 3uzp_A           63 GGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSK---NFIHRDV  131 (296)
T ss_dssp             TSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             cCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCC
Confidence            444 444444446677889999999 8999999874332  288899999999999999999999   9999996

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.37  E-value=9.2e-12  Score=67.87  Aligned_cols=68  Identities=16%  Similarity=0.222  Sum_probs=57.3

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ++++..+..+.......++++|++ ++++.+++.....  .+.+..+..++.|++.|+.|||..   +|+||||
T Consensus        62 ~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDI  129 (483)
T 3sv0_A           62 GTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSK---SFLHRDI  129 (483)
T ss_dssp             STTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccc
Confidence            355666666677788899999999 8999999875332  288999999999999999999999   9999997

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.37  E-value=5.5e-13  Score=70.90  Aligned_cols=71  Identities=18%  Similarity=0.393  Sum_probs=56.6

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhccC------CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKEN------EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +||||+++++++..  +...++++||+. +++...+....      ....++...+..++.|++.|+.|||..   +++|
T Consensus        76 ~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH  151 (405)
T 3rgf_A           76 KHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLH  151 (405)
T ss_dssp             CCTTBCCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred             CCCCeeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeC
Confidence            59999999999965  568999999997 46766664211      111278888999999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      |||
T Consensus       152 ~Dl  154 (405)
T 3rgf_A          152 RDL  154 (405)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            997

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.36  E-value=1.6e-11  Score=63.93  Aligned_cols=68  Identities=16%  Similarity=0.191  Sum_probs=56.3

Q ss_pred             CceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            3 QNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         3 ~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .+++.+.+.+...+..++++|++ ++++...+..... ..++...+..++.|++.|+.|||..   +++||||
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dl  149 (355)
T 2eu9_A           82 FLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDL  149 (355)
T ss_dssp             SCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCC
T ss_pred             eeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCC
Confidence            34888999999999999999999 5666666654332 2288889999999999999999999   9999996

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.36  E-value=9e-13  Score=69.39  Aligned_cols=53  Identities=4%  Similarity=0.019  Sum_probs=41.8

Q ss_pred             eEEEEEecCCCCCHHHHhhccCCcccCCHHhH------HHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           17 CMFAIYKYMERGSLCCVLHKENEALELNWTNN------VNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ..++++||+. |+|.+++......  +.....      ..++.|++.|+.|||..   +++||||
T Consensus       162 ~~~lv~e~~~-~~L~~~l~~~~~~--~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrDi  220 (371)
T 3q60_A          162 NYLLLMPAAS-VDLELLFSTLDFV--YVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGHF  220 (371)
T ss_dssp             EEEEEECCCS-EEHHHHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred             eEEEEecCCC-CCHHHHHHHhccc--cchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCcC
Confidence            3799999998 8999999763221  333333      56679999999999999   9999997

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.34  E-value=2.1e-12  Score=68.07  Aligned_cols=66  Identities=18%  Similarity=0.380  Sum_probs=56.5

Q ss_pred             CCCceeeEeeEEeeCCeE------EEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKKCM------FAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~------~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +||||+++++++...+..      ++++|++. +++...+..  .   ++...+..++.+++.|+.|||..   +++|||
T Consensus        99 ~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~---~~~~~~~~i~~qi~~aL~~LH~~---~ivH~D  169 (371)
T 4exu_A           99 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGM--E---FSEEKIQYLVYQMLKGLKYIHSA---GVVHRD  169 (371)
T ss_dssp             CCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTS--C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred             CCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhhc--C---CCHHHHHHHHHHHHHHHHHHHHC---CCcCCC
Confidence            589999999999876654      99999997 577766632  1   78889999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       170 i  170 (371)
T 4exu_A          170 L  170 (371)
T ss_dssp             C
T ss_pred             c
Confidence            6

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.34  E-value=1.3e-12  Score=69.00  Aligned_cols=67  Identities=19%  Similarity=0.326  Sum_probs=53.8

Q ss_pred             CCCceeeEeeEEeeC------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+||+++++++...      ...++++|++ ++++...+.. .   .++...+..++.|++.|+.|+|..   +++|||
T Consensus        86 ~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~D  157 (367)
T 2fst_X           86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-Q---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRD  157 (367)
T ss_dssp             CCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC------C---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred             CCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc-C---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCC
Confidence            589999999998754      4578999998 6788777754 2   288889999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       158 l  158 (367)
T 2fst_X          158 L  158 (367)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.33  E-value=7.6e-13  Score=72.81  Aligned_cols=61  Identities=20%  Similarity=0.256  Sum_probs=51.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++...+..+...++++||+++++|.+++..           ...++.|++.++.|+|..   +|+|||+
T Consensus       397 ~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDi  457 (540)
T 3en9_A          397 KDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDL  457 (540)
T ss_dssp             GGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTC
T ss_pred             CCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCC
Confidence            489999665555677778999999999999988754           346889999999999999   9999997

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.33  E-value=2.4e-11  Score=64.29  Aligned_cols=68  Identities=21%  Similarity=0.251  Sum_probs=57.8

Q ss_pred             CceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh--CCCCCeEeccC
Q 039179            3 QNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH--HCTPSIIYRDI   75 (75)
Q Consensus         3 ~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~~~i~hrdl   75 (75)
                      ++++++.+.+..++..++++|++. +++...+..... ..++...+..++.|++.|+.|+|.  .   +|+||||
T Consensus       116 ~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~~---~ivHrDl  185 (382)
T 2vx3_A          116 YYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATPEL---SIIHCDL  185 (382)
T ss_dssp             GGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTSTTT---CEECCCC
T ss_pred             eeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccCCC---CEEcCCC
Confidence            469999999999999999999996 589888876432 227888899999999999999994  5   8999997

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.31  E-value=6e-12  Score=66.00  Aligned_cols=70  Identities=24%  Similarity=0.413  Sum_probs=58.3

Q ss_pred             CCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+||+++++.+...+    ..++++|++ ++++...+...... .++...+..++.|++.|+.|||..+  +++||||
T Consensus        85 ~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Di  158 (373)
T 1q8y_A           85 ANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHR-GIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDI  158 (373)
T ss_dssp             HTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCC
T ss_pred             cchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhcc-CCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCC
Confidence            789999999987644    788999999 88999988763322 2788889999999999999999842  7999997

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.31  E-value=2.4e-12  Score=67.35  Aligned_cols=66  Identities=17%  Similarity=0.358  Sum_probs=55.6

Q ss_pred             CCCceeeEeeEEeeCCe------EEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKKC------MFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~------~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +||||+++++++.....      .++++|++. +++...+..     .++...+..++.+++.|+.|||..   +++|||
T Consensus        81 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~d  151 (353)
T 3coi_A           81 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRD  151 (353)
T ss_dssp             CCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSS
T ss_pred             CCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCC
Confidence            58999999999987653      499999997 577665532     178889999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       152 l  152 (353)
T 3coi_A          152 L  152 (353)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.31  E-value=7.7e-12  Score=64.77  Aligned_cols=72  Identities=21%  Similarity=0.145  Sum_probs=58.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhcc--CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE--NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++|++.+ ++...+...  .....++......++.+++.|+.|+|...  +++||||
T Consensus        79 ~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dl  152 (327)
T 3aln_A           79 DCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDI  152 (327)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCC
T ss_pred             CCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCC
Confidence            589999999999999999999999985 776666421  11122788888999999999999999842  6899996

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.77  E-value=2.9e-09  Score=54.69  Aligned_cols=56  Identities=9%  Similarity=0.153  Sum_probs=42.0

Q ss_pred             eeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            6 VKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         6 ~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +++.+.+. .+..++++||++++++.. +.       .  .....++.+++.|+.++|..   +++|||+
T Consensus       164 ~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~-------~--~~~~~i~~qi~~~l~~lH~~---giiHrDl  219 (282)
T 1zar_A          164 LAVPKVYA-WEGNAVLMELIDAKELYR-VR-------V--ENPDEVLDMILEEVAKFYHR---GIVHGDL  219 (282)
T ss_dssp             SSSCCEEE-EETTEEEEECCCCEEGGG-CC-------C--SCHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCcCeEEe-ccceEEEEEecCCCcHHH-cc-------h--hhHHHHHHHHHHHHHHHHHC---CCEeCCC
Confidence            34444433 345689999999999877 32       1  12346889999999999999   9999996

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.41  E-value=5e-07  Score=45.84  Aligned_cols=50  Identities=12%  Similarity=0.127  Sum_probs=37.1

Q ss_pred             eEEEEEecCCC-C----CHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhh-hCCCCCeEeccC
Q 039179           17 CMFAIYKYMER-G----SLCCVLHKENEALELNWTNNVNIAKCVAHALSYLH-HHCTPSIIYRDI   75 (75)
Q Consensus        17 ~~~~~~e~~~~-~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~hrdl   75 (75)
                      ..+++|||+.+ |    ++......      .+......++.+++.++.++| ..   +++|||+
T Consensus       142 ~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givHrDl  197 (258)
T 1zth_A          142 KNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVHADL  197 (258)
T ss_dssp             TTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSC
T ss_pred             CCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCC
Confidence            45799999942 3    55554322      223456788899999999999 88   9999997

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.30  E-value=6e-07  Score=48.38  Aligned_cols=45  Identities=11%  Similarity=0.132  Sum_probs=34.7

Q ss_pred             EEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           19 FAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        19 ~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +++|||+.++++.....       .  .....+..|++.++.++|..   +++||||
T Consensus       187 ~LVME~i~G~~L~~l~~-------~--~~~~~l~~qll~~l~~lH~~---gIVHrDL  231 (397)
T 4gyi_A          187 TIVMSLVDALPMRQVSS-------V--PDPASLYADLIALILRLAKH---GLIHGDF  231 (397)
T ss_dssp             EEEEECCSCEEGGGCCC-------C--SCHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             eEEEEecCCccHhhhcc-------c--HHHHHHHHHHHHHHHHHHHC---CCcCCCC
Confidence            69999998877654321       1  12355778999999999999   9999997

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.26  E-value=1.5e-06  Score=46.67  Aligned_cols=54  Identities=19%  Similarity=0.212  Sum_probs=39.7

Q ss_pred             EEEEEecCCCCCHHHHhhcc----CCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179           18 MFAIYKYMERGSLCCVLHKE----NEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus        18 ~~~~~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .+++++.+ .+++.+++...    .....+++.....++.|++.|+.|||..   +|+||||
T Consensus       180 ~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi  237 (413)
T 3dzo_A          180 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL  237 (413)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             eEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence            45566654 67888887421    1122266677788889999999999999   9999997

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.72  E-value=0.0002  Score=36.16  Aligned_cols=54  Identities=11%  Similarity=0.022  Sum_probs=37.3

Q ss_pred             CceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh
Q 039179            3 QNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH   64 (75)
Q Consensus         3 ~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~   64 (75)
                      ..+.++++....++..+++||++++.++......        ......+..++...+..+|.
T Consensus        70 ~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           70 LPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             SCCCCEEEEEEETTEEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEEecCCceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhC
Confidence            4566788888888899999999999888765321        11123455666677777776

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.64  E-value=0.0076  Score=31.87  Aligned_cols=56  Identities=14%  Similarity=0.257  Sum_probs=35.3

Q ss_pred             ceeeEeeEEeeC---CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh
Q 039179            4 NIVKLYGFCLHK---KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH   64 (75)
Q Consensus         4 ~i~~~~~~~~~~---~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~   64 (75)
                      .+.+++..+.+.   +..++++|++++..+.....  .   .++......+..++...+..+|.
T Consensus        99 pvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~--~---~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A           99 PVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSL--P---GMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             CCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTC--T---TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCCccCCeEEEEEecCCeecCCCcc--c---cCCHHHHHHHHHHHHHHHHHHhC
Confidence            466777777665   45789999999866532111  1   14455555666677777777775

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=95.80  E-value=0.039  Score=27.52  Aligned_cols=27  Identities=4%  Similarity=-0.041  Sum_probs=21.1

Q ss_pred             eeeEeeEEeeCCeEEEEEecCCCCCHH
Q 039179            5 IVKLYGFCLHKKCMFAIYKYMERGSLC   31 (75)
Q Consensus         5 i~~~~~~~~~~~~~~~~~e~~~~~~l~   31 (75)
                      +.++++....++..++++|++++.++.
T Consensus        77 vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           77 CAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             BCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CCeEEEeccCCCCCEEEEEecCCcccC
Confidence            456777777777789999999987763

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=91.60  E-value=0.71  Score=23.28  Aligned_cols=54  Identities=17%  Similarity=0.108  Sum_probs=36.5

Q ss_pred             eeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhC
Q 039179            5 IVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHH   65 (75)
Q Consensus         5 i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~   65 (75)
                      +.+.+..+.+++..+++||++++.++.......       ......+..++...+.-||..
T Consensus        82 VP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~  135 (272)
T 4gkh_A           82 LPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSI  135 (272)
T ss_dssp             CCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTS
T ss_pred             cCeEEEEEEECCeEEEEEEeeCCccccccccCC-------HHHHHHHHHHHHHHHHHhcCC
Confidence            456777788888899999999988877655321       112234555666667777764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	75
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-13
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-13
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-12
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-12
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-12
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-12
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-11
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-11
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-11
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-11
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-11
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-10
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-10
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-10
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-10
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-10
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-10
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-09
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-09
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-09
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-08
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-08
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-08
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	8e-08
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-07
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-07
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-07
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-07
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-07
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-06
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-06
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-06
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-06
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-06
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-05
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	0.001
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.002
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	0.002

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.6 bits (149), Expect = 1e-13
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
               IV  YG       +    ++M+ GSL  VL K      +       ++  V   L+
Sbjct: 62  NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLT 118

Query: 61  YLHHHCTPSIIYRDI 75
           YL       I++RD+
Sbjct: 119 YLREKH--KIMHRDV 131

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 2e-13
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NI+   G+      +  + ++ E  SL   LH      E      ++IA+  A  + 
Sbjct: 62  RHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFE--MIKLIDIARQTAQGMD 118

Query: 61  YLHHHCTPSIIYRDI 75
           YLH      II+RD+
Sbjct: 119 YLHAKS---IIHRDL 130

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 6e-13
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 18/90 (20%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK---------------ENEALELNW 45
            H NIV L G C        I +Y   G L   L +               E++ L L+ 
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 46  TNNVNIAKCVAHALSYLHHHCTPSIIYRDI 75
            + ++ +  VA  +++L        I+RD+
Sbjct: 145 EDLLSFSYQVAKGMAFLASKN---CIHRDL 171

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 1e-12
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QHQ +V+LY     +     I +YME GSL   L      ++L     +++A  +A  ++
Sbjct: 66  QHQRLVRLYAVVTQEPIYI-ITEYMENGSLVDFLKT-PSGIKLTINKLLDMAAQIAEGMA 123

Query: 61  YLHHHCTPSIIYRDI 75
           ++        I+RD+
Sbjct: 124 FIEERN---YIHRDL 135

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 57.8 bits (139), Expect = 2e-12
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H  +V L+        M  IY++M  G L   +  E+  +  +    V   + V   L 
Sbjct: 81  RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA--VEYMRQVCKGLC 138

Query: 61  YLHHHCTPSIIYRDI 75
           ++H +     ++ D+
Sbjct: 139 HMHENN---YVHLDL 150

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 57.0 bits (137), Expect = 4e-12
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H  ++ L+     K  M  I +++  G L   +  E+  +       +N  +     L 
Sbjct: 84  HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV--INYMRQACEGLK 141

Query: 61  YLHHHCTPSIIYRDI 75
           ++H H   SI++ DI
Sbjct: 142 HMHEH---SIVHLDI 153

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (135), Expect = 7e-12
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NI++LYG+      ++ I +Y   G++   L K +   + +          +A+ALS
Sbjct: 64  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALS 120

Query: 61  YLHHHCTPSIIYRDI 75
           Y H      +I+RDI
Sbjct: 121 YCHSK---RVIHRDI 132

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 1e-11
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NIVKL     ++  ++ + ++   G++  V+ +      L  +    + K    AL+
Sbjct: 67  DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALN 124

Query: 61  YLHHHCTPSIIYRDI 75
           YLH +    II+RD+
Sbjct: 125 YLHDN---KIIHRDL 136

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 2e-11
 Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 23/95 (24%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALE------------------ 42
            H+NIV L G C     ++ I++Y   G L   L  + E                     
Sbjct: 99  SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 158

Query: 43  --LNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI 75
             L + + +  A  VA  + +L      S ++RD+
Sbjct: 159 NVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 190

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 3e-11
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NI+ L+      + +  I++++    +   ++      ELN    V+    V  AL 
Sbjct: 59  RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQ 116

Query: 61  YLHHHCTPSIIYRDI 75
           +LH H    I + DI
Sbjct: 117 FLHSHN---IGHFDI 128

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.6 bits (131), Expect = 3e-11
 Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H N ++  G  L +   + + +Y    +   +   +     L       +       L+
Sbjct: 73  RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLA 129

Query: 61  YLHHHCTPSIIYRDI 75
           YLH H   ++I+RD+
Sbjct: 130 YLHSH---NMIHRDV 141

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 3e-11
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H+ +V+LYG C  ++ +F I +YM  G L   L +            + + K V  A+ 
Sbjct: 57  SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAME 114

Query: 61  YLHHHCTPSIIYRDI 75
           YL        ++RD+
Sbjct: 115 YLESKQ---FLHRDL 126

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.0 bits (129), Expect = 5e-11
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
               IV +         +  I   M  G L   L +     E +       A  +   L 
Sbjct: 65  DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM---RFYAAEIILGLE 121

Query: 61  YLHHHCTPSIIYRDI 75
           ++H+     ++YRD+
Sbjct: 122 HMHNRF---VVYRDL 133

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 8e-11
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 1   QHQNIVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHAL 59
           +H N+V+L G  +  K  ++ + +YM +GSL   L     ++ L     +  +  V  A+
Sbjct: 58  RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAM 116

Query: 60  SYLHHHCTPSIIYRDI 75
            YL  +     ++RD+
Sbjct: 117 EYLEGNN---FVHRDL 129

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 1e-10
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            +  IV+L G C  +  M  + +    G L   L  + E  E+  +N   +   V+  + 
Sbjct: 67  DNPYIVRLIGVCQAEALML-VMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMK 123

Query: 61  YLHHHCTPSIIYRDI 75
           YL      + ++RD+
Sbjct: 124 YLEEK---NFVHRDL 135

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 1e-10
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H   VKLY      + ++    Y + G L   + K       + T        +  AL 
Sbjct: 66  DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALE 122

Query: 61  YLHHHCTPSIIYRDI 75
           YLH      II+RD+
Sbjct: 123 YLHGKG---IIHRDL 134

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 2e-10
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 13/84 (15%)

Query: 1   QHQNIVKLYGFC----LHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVA 56
           +H+NI+               ++ +  Y E GSL   L++      +     + +A   A
Sbjct: 55  RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTA 110

Query: 57  HALSYLHHHC-----TPSIIYRDI 75
             L++LH         P+I +RD+
Sbjct: 111 SGLAHLHMEIVGTQGKPAIAHRDL 134

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 2e-10
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 1   QHQNIVKLYGFCL----HKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVA 56
           QH NIV+ Y         KKC+  + + M  G+L   L +      +      +  + + 
Sbjct: 66  QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQIL 122

Query: 57  HALSYLHHHCTPSIIYRDI 75
             L +LH    P II+RD+
Sbjct: 123 KGLQFLHTRT-PPIIHRDL 140

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 3e-10
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H+N+VK YG        +   +Y   G L   +  +     +   +       +   + 
Sbjct: 61  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVV 117

Query: 61  YLHHHCTPSIIYRDI 75
           YLH      I +RDI
Sbjct: 118 YLHGIG---ITHRDI 129

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 4e-10
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            +  IV++ G C  +  M  + +  E G L   L +      +   N + +   V+  + 
Sbjct: 66  DNPYIVRMIGICEAESWML-VMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMK 121

Query: 61  YLHHHCTPSIIYRDI 75
           YL        ++RD+
Sbjct: 122 YLEESN---FVHRDL 133

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 4e-10
 Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 1   QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALE-LNWTNNVNIAKCVAH 57
           +H NIV+ Y   + +    ++ + +Y E G L  V+ K  +  + L+    + +   +  
Sbjct: 61  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 120

Query: 58  ALSYLHHH--CTPSIIYRDI 75
           AL   H       ++++RD+
Sbjct: 121 ALKECHRRSDGGHTVLHRDL 140

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 4e-10
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H  +V+LYG CL +  +  ++++ME G L   L  +           + +   V   ++
Sbjct: 58  SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFA--AETLLGMCLDVCEGMA 115

Query: 61  YLHHHCTPSIIYRDI 75
           YL   C   +I+RD+
Sbjct: 116 YLEEAC---VIHRDL 127

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (122), Expect = 5e-10
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           ++ NIV      L    ++ + +Y+  GSL  V+ +       +      + +    AL 
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALE 130

Query: 61  YLHHHCTPSIIYRDI 75
           +LH +    +I+RDI
Sbjct: 131 FLHSN---QVIHRDI 142

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 1e-09
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 16/88 (18%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHK-------------ENEALELNWTN 47
            H NI+ L G C H+  ++   +Y   G+L   L K              + A  L+   
Sbjct: 69  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128

Query: 48  NVNIAKCVAHALSYLHHHCTPSIIYRDI 75
            ++ A  VA  + YL        I+RD+
Sbjct: 129 LLHFAADVARGMDYLSQKQ---FIHRDL 153

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.1 bits (119), Expect = 1e-09
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H N+V+L G C  +   + I ++M  G+L   L + N   E++    + +A  ++ A+ 
Sbjct: 71  KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAME 129

Query: 61  YLHHHCTPSIIYRDI 75
           YL        I+RD+
Sbjct: 130 YLEKKN---FIHRDL 141

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 1e-09
 Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 9/81 (11%)

Query: 1   QHQNIVKLYGFCLH------KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKC 54
            H NIV+L  F         +  +  +  Y+         H       L           
Sbjct: 71  DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130

Query: 55  VAHALSYLHHHCTPSIIYRDI 75
           +  +L+Y+H      I +RDI
Sbjct: 131 LFRSLAYIHSFG---ICHRDI 148

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.0 bits (116), Expect = 3e-09
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H N++ L G       +  I ++ME GSL   L + +   +      V + + +A  + 
Sbjct: 85  DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMK 142

Query: 61  YLHHHCTPSIIYRDI 75
           YL        ++RD+
Sbjct: 143 YLADMN---YVHRDL 154

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 6e-09
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 10/82 (12%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALE-------LNWTNNVNIAK 53
              ++V+L G     +    I + M RG L   L     A+         + +  + +A 
Sbjct: 81  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 140

Query: 54  CVAHALSYLHHHCTPSIIYRDI 75
            +A  ++YL+ +     ++RD+
Sbjct: 141 EIADGMAYLNANK---FVHRDL 159

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.7 bits (113), Expect = 7e-09
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NIV L         ++ I + +  G L   + ++         +   +   V  A+ 
Sbjct: 65  KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVK 121

Query: 61  YLHHHCTPSIIYRDI 75
           YLH      I++RD+
Sbjct: 122 YLHDLG---IVHRDL 133

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 1e-08
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+ +V+LY     +     + +YM +GSL   L  E           V++A  +A  ++
Sbjct: 70  RHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYL-RLPQLVDMAAQIASGMA 127

Query: 61  YLHHHCTPSIIYRDI 75
           Y+        ++RD+
Sbjct: 128 YVERMN---YVHRDL 139

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 1e-08
 Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H  +  ++     K+ +F + +Y+  G L   +   +   + + +     A  +   L 
Sbjct: 61  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQ 117

Query: 61  YLHHHCTPSIIYRD 74
           +LH      I+YRD
Sbjct: 118 FLHSKG---IVYRD 128

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 1e-08
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 16/88 (18%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLH-------------KENEALELNWTN 47
           +H+NI+ L G C     ++ I +Y  +G+L   L                N   +L+  +
Sbjct: 77  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 136

Query: 48  NVNIAKCVAHALSYLHHHCTPSIIYRDI 75
            V+ A  VA  + YL        I+RD+
Sbjct: 137 LVSCAYQVARGMEYLASKK---CIHRDL 161

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 1e-08
 Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 1   QHQNIVKLYGFC----LHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVA 56
           Q  +IV++          +KC+  + + ++ G L   +    +           I K + 
Sbjct: 63  QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIG 121

Query: 57  HALSYLHHHCTPSIIYRDI 75
            A+ YLH     +I +RD+
Sbjct: 122 EAIQYLHSI---NIAHRDV 137

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 1e-08
 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H+N+++LYG       M  + +    GSL   L K      L        A  VA  + 
Sbjct: 69  DHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL--SRYAVQVAEGMG 125

Query: 61  YLHHHCTPSIIYRDI 75
           YL        I+RD+
Sbjct: 126 YLESKR---FIHRDL 137

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 46.7 bits (110), Expect = 2e-08
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 10/79 (12%)

Query: 1   QHQNIVKLYGFCLHK----KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVA 56
            H  IV +Y     +       + + +Y++  +L  ++H E     +     + +     
Sbjct: 65  NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADAC 121

Query: 57  HALSYLHHHCTPSIIYRDI 75
            AL++ H +    II+RD+
Sbjct: 122 QALNFSHQNG---IIHRDV 137

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.1 bits (106), Expect = 6e-08
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H  I++++G     + +F I  Y+E G L  +L K           N       A    
Sbjct: 62  THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS------QRFPNPVAKFYAAEVCL 115

Query: 61  YLHHHCTPSIIYRDI 75
            L +  +  IIYRD+
Sbjct: 116 ALEYLHSKDIIYRDL 130

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 8e-08
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H +IVKL G    +  ++ I +    G L   L     +L+L     +  A  ++ AL+
Sbjct: 66  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASL--ILYAYQLSTALA 122

Query: 61  YLHHHCTPSIIYRDI 75
           YL        ++RDI
Sbjct: 123 YLESKR---FVHRDI 134

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 2e-07
 Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           QH N++ L+    +K  +  I + +  G L   L ++    E          + +   L+
Sbjct: 71  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE------EEATEFLKQILN 124

Query: 61  YLHHHCTPSIIYRDI 75
            +++  +  I + D+
Sbjct: 125 GVYYLHSLQIAHFDL 139

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 43.9 bits (103), Expect = 2e-07
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NI++L          F ++  M++G L   L ++     L+      I + +   + 
Sbjct: 68  GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVIC 124

Query: 61  YLHHHCTPSIIYRDI 75
            LH      I++RD+
Sbjct: 125 ALHKLN---IVHRDL 136

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 2e-07
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            + ++ +L G CL       I + M  G L   + +  +   +     +N    +A  ++
Sbjct: 69  DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMN 125

Query: 61  YLHHHCTPSIIYRDI 75
           YL       +++RD+
Sbjct: 126 YLEDR---RLVHRDL 137

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 3e-07
 Identities = 18/75 (24%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           Q   +V L+     +  +  I  Y+  G L   L +     E            V   + 
Sbjct: 87  QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQ------IYVGEIVL 140

Query: 61  YLHHHCTPSIIYRDI 75
            L H     IIYRDI
Sbjct: 141 ALEHLHKLGIIYRDI 155

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.3 bits (101), Expect = 3e-07
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 24/96 (25%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALE------------------ 42
            + NIVKL G C   K M  +++YM  G L   L   +                      
Sbjct: 74  DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 133

Query: 43  ---LNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI 75
              L+    + IA+ VA  ++YL        ++RD+
Sbjct: 134 PPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDL 166

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 7e-07
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NI+ L     HK  +  ++ +ME       +  ++ +L L  ++           L 
Sbjct: 58  SHPNIIGLLDAFGHKSNISLVFDFMET---DLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 114

Query: 61  YLHHHCTPSIIYRDI 75
           YLH H    I++RD+
Sbjct: 115 YLHQHW---ILHRDL 126

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 9e-07
 Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NI+ +               Y+    +   L+K  +   L+  +       +   L 
Sbjct: 64  RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLK 123

Query: 61  YLHHHCTPSIIYRDI 75
           Y+H      +++RD+
Sbjct: 124 YIHSAN---VLHRDL 135

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 1e-06
 Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 5/74 (6%)

Query: 2   HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSY 61
              +++L  +         I +  E          E  AL+       +    V  A+ +
Sbjct: 68  FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELA--RSFFWQVLEAVRH 125

Query: 62  LHHHCTPSIIYRDI 75
            H+     +++RDI
Sbjct: 126 CHNCG---VLHRDI 136

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (97), Expect = 1e-06
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
               +VKL         ++ + +Y+  G +   L +       +  +    A  +     
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFE 155

Query: 61  YLHHHCTPSIIYRDI 75
           YLH      +IYRD+
Sbjct: 156 YLHSLD---LIYRDL 167

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-06
 Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCV---LHKENEALELNWTNNVNIAKCVAH 57
           +H N+V+L+  C   +        +    +         +     +      ++   +  
Sbjct: 68  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 127

Query: 58  ALSYLHHHCTPSIIYRDI 75
            L +LH H    +++RD+
Sbjct: 128 GLDFLHSHR---VVHRDL 142

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 2e-06
 Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 6/76 (7%)

Query: 1   QHQNIVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHAL 59
            H N++ L G CL  +     +  YM+ G L   +  E     +       +        
Sbjct: 86  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG--- 142

Query: 60  SYLHHHCTPSIIYRDI 75
             +    +   ++RD+
Sbjct: 143 --MKFLASKKFVHRDL 156

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.6 bits (94), Expect = 3e-06
 Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           Q    +    +C  +     +   +   SL  + +  +    L     + +A  +   + 
Sbjct: 60  QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTV--LLLADQMISRIE 117

Query: 61  YLHHHCTPSIIYRDI 75
           Y+H     + I+RD+
Sbjct: 118 YIHSK---NFIHRDV 129

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 3e-06
 Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H  +  L         +  + +Y   G L   L +E    E             A  +S
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEIVS 116

Query: 61  YLHHHCTPSIIYRDI 75
            L +  +  ++YRDI
Sbjct: 117 ALEYLHSRDVVYRDI 131

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 39.9 bits (92), Expect = 5e-06
 Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H NIVKLY     KK +  +++++++     +   E          +V     +   L+
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE------GGLESVTAKSFLLQLLN 111

Query: 61  YLHHHCTPSIIYRDI 75
            + +     +++RD+
Sbjct: 112 GIAYCHDRRVLHRDL 126

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 7e-06
 Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NIVKL      +  ++ +++++ +     +       + L       I   +   L 
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-----IKSYLFQLLQ 113

Query: 61  YLHHHCTPSIIYRDI 75
            L    +  +++RD+
Sbjct: 114 GLAFCHSHRVLHRDL 128

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 1e-05
 Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 17/89 (19%)

Query: 1   QHQNIVKLYGFCLHK-KCMFAIYKYMERGSLCCVLHKENEALE-------------LNWT 46
            H N+V L G C      +  I ++ + G+L   L  +                  L   
Sbjct: 75  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 134

Query: 47  NNVNIAKCVAHALSYLHHHCTPSIIYRDI 75
           + +  +  VA  + +L        I+RD+
Sbjct: 135 HLICYSFQVAKGMEFLASRK---CIHRDL 160

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 2e-05
 Identities = 7/67 (10%), Positives = 20/67 (29%), Gaps = 1/67 (1%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKE-NEALELNWTNNVNIAKCVAHAL 59
           +H+N++ L       + +     +            +  +  +L       +   +   L
Sbjct: 75  RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGL 134

Query: 60  SYLHHHC 66
            Y+H   
Sbjct: 135 RYIHAAG 141

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 37.1 bits (85), Expect = 5e-05
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 11/77 (14%)

Query: 1   QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHA 58
              NI+ L         +    +++++       +         L   +       +  A
Sbjct: 88  GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKA 141

Query: 59  LSYLHHHCTPSIIYRDI 75
           L Y H      I++RD+
Sbjct: 142 LDYCHSMG---IMHRDV 155

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 7e-05
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H NI++L G     K M  I +YME G+L   L +++    +       +   +    +
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQ-----LVGMLRGIAA 121

Query: 61  YLHHHCTPSIIYRDI 75
            + +    + ++RD+
Sbjct: 122 GMKYLANMNYVHRDL 136

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 4e-04
 Identities = 10/75 (13%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
           +H+NIV+L+      K +  ++++ ++                   +   +   +   L 
Sbjct: 59  KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG------DLDPEIVKSFLFQLLK 112

Query: 61  YLHHHCTPSIIYRDI 75
            L    + ++++RD+
Sbjct: 113 GLGFCHSRNVLHRDL 127

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (75), Expect = 0.001
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
            H+NI+ L      +K +           L      +   +EL+      +   +   + 
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 133

Query: 61  YLHHHCTPSIIYRDI 75
           +LH      II+RD+
Sbjct: 134 HLHSAG---IIHRDL 145

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (73), Expect = 0.002
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYK---YMERGSLCCVLHKENEALELNWTNNVNIAKCVAH 57
           +H+N+V L   C  K   +   K   Y+        L      + + +T +  I + +  
Sbjct: 67  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE-IKRVMQM 125

Query: 58  ALSYLHHHCTPSIIYRDI 75
            L+ L++     I++RD+
Sbjct: 126 LLNGLYYIHRNKILHRDM 143

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 32.1 bits (72), Expect = 0.002
 Identities = 10/75 (13%), Positives = 21/75 (28%), Gaps = 6/75 (8%)

Query: 1   QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALS 60
               I  +Y F         +   +       +     +    +       AK +   + 
Sbjct: 59  GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK---FSVKTVAMAAKQMLARVQ 115

Query: 61  YLHHHCTPSIIYRDI 75
            +H      ++YRDI
Sbjct: 116 SIHEKS---LVYRDI 127

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	75
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.84
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.83
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.83
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.83
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.83
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.83
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.82
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.82
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.82
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.81
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.81
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.81
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.81
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.81
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.81
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.8
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.8
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.8
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.8
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.8
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.8
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.79
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.79
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.79
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.78
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.78
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.77
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.77
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.75
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.75
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.74
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.74
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.74
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.74
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.74
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.73
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.72
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.72
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.71
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.71
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.71
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.69
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.69
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.69
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.68
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.66
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.65
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.64
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.63
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.63
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.63
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.63
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.62
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.59
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.56
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.54
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.52
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.52
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.5
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.5
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.46
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.95
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.51
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	86.34

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.1e-21  Score=96.05  Aligned_cols=69  Identities=23%  Similarity=0.371  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+++|+|.+++.....   +++..+..++.|++.|+.|||++   +|+||||
T Consensus        61 ~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~---l~e~~~~~i~~qi~~al~ylH~~---~IiHrDi  129 (271)
T d1nvra_          61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHGI---GITHRDI  129 (271)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHHc---CCccCcc
Confidence            599999999999999999999999999999998865433   89999999999999999999999   9999997

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.5e-20  Score=94.32  Aligned_cols=69  Identities=30%  Similarity=0.523  Sum_probs=64.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+++|++...+.....   +++..+..++.|++.|+.|+|++   +|+||||
T Consensus        64 ~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~---l~e~~~~~i~~qi~~al~~lH~~---~ivHrDi  132 (263)
T d2j4za1          64 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHSK---RVIHRDI  132 (263)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHC---Ceeeeee
Confidence            599999999999999999999999999999999876544   89999999999999999999999   9999997

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.6e-20  Score=93.67  Aligned_cols=68  Identities=25%  Similarity=0.412  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+++|++...+... .   +++..+..++.|++.|+.|||++   +|+||||
T Consensus        75 ~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~-~---l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDi  142 (293)
T d1yhwa1          75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-C---MDEGQIAAVCRECLQALEFLHSN---QVIHRDI  142 (293)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS-C---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhcc-C---CCHHHHHHHHHHHHHHHHHHHHC---CCcccCC
Confidence            5999999999999999999999999999999887653 2   88999999999999999999999   9999997

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.6e-20  Score=94.36  Aligned_cols=70  Identities=27%  Similarity=0.414  Sum_probs=63.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+++|++...+.....  .+++..+..++.|++.|+.|+|++   +|+||||
T Consensus        67 ~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~--~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDi  136 (288)
T d2jfla1          67 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDN---KIIHRDL  136 (288)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEEeec
Confidence            599999999999999999999999999999998765332  288999999999999999999999   9999997

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.8e-20  Score=93.85  Aligned_cols=69  Identities=23%  Similarity=0.317  Sum_probs=64.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+++|+|..++.....   +++..+..++.|++.|+.|||+.   +++|||+
T Consensus        71 ~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~---l~~~~~~~~~~qi~~al~yLH~~---~ivHrDi  139 (293)
T d1jksa_          71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSL---QIAHFDL  139 (293)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccc---cchhHHHHHHHHHHHHHHhhhhc---ceeeccc
Confidence            599999999999999999999999999999999876543   89999999999999999999999   9999996

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=3.5e-20  Score=94.59  Aligned_cols=69  Identities=23%  Similarity=0.315  Sum_probs=64.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+++|+|.+++...+.   +++..+..++.|++.|+.|+|+.   +++|||+
T Consensus        65 ~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~al~ylH~~---~iiHrDi  133 (307)
T d1a06a_          65 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHDL---GIVHRDL  133 (307)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccC---CCHHHHHHHHHHHHHHHHhhhhc---eeeeEEe
Confidence            599999999999999999999999999999999976443   89999999999999999999999   9999997

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.8e-20  Score=93.95  Aligned_cols=70  Identities=26%  Similarity=0.312  Sum_probs=64.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+.+|+|...+.....  .+++..+..++.|++.|+.|||+.   +|+||||
T Consensus        59 ~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~--~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDl  128 (321)
T d1tkia_          59 RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSH---NIGHFDI  128 (321)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHc---CCCcccc
Confidence            599999999999999999999999999999999875432  288999999999999999999999   9999997

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.82  E-value=6.1e-20  Score=92.61  Aligned_cols=69  Identities=23%  Similarity=0.403  Sum_probs=64.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .||||+++++++.+++..+++|||+++|+|..++...+.   +++..+..++.|++.|+.|+|.+   +|+||||
T Consensus        68 ~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~---l~e~~~~~~~~qi~~al~~lH~~---~ivHrDl  136 (277)
T d1phka_          68 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALLEVICALHKL---NIVHRDL  136 (277)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHc---CCccccc
Confidence            389999999999999999999999999999999976543   89999999999999999999999   9999997

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=2.4e-20  Score=94.87  Aligned_cols=70  Identities=24%  Similarity=0.453  Sum_probs=63.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++||+++|++..++.....  .+++..+..++.|++.|+.|||+.   +++||||
T Consensus        85 ~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~--~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDl  154 (299)
T d1jpaa_          85 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLADM---NYVHRDL  154 (299)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccC--CCCHHHHHHHHHHHHHHHHHHhhC---CCccCcc
Confidence            599999999999999999999999999999998875332  288889999999999999999999   9999997

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.81  E-value=1.3e-19  Score=93.83  Aligned_cols=70  Identities=23%  Similarity=0.344  Sum_probs=63.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+++|+|...+.....  .+++..+..++.|++.|+.|+|+.   +|+||||
T Consensus        84 ~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~--~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDi  153 (352)
T d1koba_          84 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEH---SIVHLDI  153 (352)
T ss_dssp             CSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---Ceeeccc
Confidence            599999999999999999999999999999887765332  289999999999999999999999   9999997

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=5.7e-20  Score=93.06  Aligned_cols=71  Identities=28%  Similarity=0.493  Sum_probs=63.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+++|++...+..... ..+++..+..++.|++.|+.|||.+   +|+||||
T Consensus        71 ~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~-~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDl  141 (287)
T d1opja_          71 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDL  141 (287)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccc-cchHHHHHHHHHHHHHHHHHHHHHC---CcccCcc
Confidence            599999999999999999999999999999999875332 2378888999999999999999999   9999997

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.81  E-value=1.4e-19  Score=93.67  Aligned_cols=70  Identities=21%  Similarity=0.360  Sum_probs=63.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+++|+|...+.....  .+++..+..++.|++.|+.|||++   +++||||
T Consensus        81 ~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~--~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDi  150 (350)
T d1koaa2          81 RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDL  150 (350)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTS--CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhc---CCeeeee
Confidence            599999999999999999999999999999998865332  289999999999999999999999   9999997

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=7.7e-20  Score=92.65  Aligned_cols=69  Identities=28%  Similarity=0.338  Sum_probs=64.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+++|++.+.+...+.   +++..+..++.|++.|+.|+|+.   +|+||||
T Consensus        66 ~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~---l~e~~~~~~~~qi~~al~ylH~~---~iiHrDi  134 (288)
T d1uu3a_          66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLHGK---GIIHRDL  134 (288)
T ss_dssp             CSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCC---CCHHHHHHHHHHHHHHHHhhccc---cEEcCcC
Confidence            599999999999999999999999999999998876544   89999999999999999999999   9999997

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1e-19  Score=91.16  Aligned_cols=70  Identities=26%  Similarity=0.539  Sum_probs=63.3

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++||+++|++.+++.....  .+++.....++.|++.|+.|+|..   +++||||
T Consensus        58 ~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDl  127 (263)
T d1sm2a_          58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDL  127 (263)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTC
T ss_pred             CCCCcccccceeccCCceEEEEEecCCCcHHHHhhcccc--CCCHHHHHHHHHHHHHHHHhhhcc---ceeeccc
Confidence            599999999999999999999999999999998875432  277888899999999999999999   9999997

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.7e-19  Score=92.51  Aligned_cols=72  Identities=29%  Similarity=0.472  Sum_probs=63.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC--------------------cccCCHHhHHHHHHHHHHHhh
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE--------------------ALELNWTNNVNIAKCVAHALS   60 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~   60 (75)
                      +||||+++++++.+++..++++||+++|++.+++.....                    ...+++..+..++.|++.|+.
T Consensus        99 ~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~  178 (325)
T d1rjba_          99 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGME  178 (325)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHH
T ss_pred             CCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHH
Confidence            599999999999999999999999999999999975321                    123678888999999999999


Q ss_pred             HhhhCCCCCeEeccC
Q 039179           61 YLHHHCTPSIIYRDI   75 (75)
Q Consensus        61 ~l~~~~~~~i~hrdl   75 (75)
                      |||.+   +|+||||
T Consensus       179 yLH~~---~IiHRDl  190 (325)
T d1rjba_         179 FLEFK---SCVHRDL  190 (325)
T ss_dssp             HHHHT---TEEETTC
T ss_pred             HHHhC---CeeeccC
Confidence            99999   9999997

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.6e-19  Score=92.53  Aligned_cols=69  Identities=20%  Similarity=0.450  Sum_probs=64.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+++|++..++.....   +++..+..++.|++.|+.|+|++   +++|||+
T Consensus        61 ~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~---~~e~~~~~~~~qi~~al~ylH~~---~iiHrDi  129 (320)
T d1xjda_          61 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSK---GIVYRDL  129 (320)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCC---CCHHHHHHHHHHHHHHHHHHHhC---CeeeccC
Confidence            599999999999999999999999999999999976544   88889999999999999999999   9999996

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=8.8e-20  Score=93.17  Aligned_cols=69  Identities=20%  Similarity=0.363  Sum_probs=62.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+.+|++.........   +++..+..++.|++.|+.|||++   +|+||||
T Consensus        73 ~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~---l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDi  141 (309)
T d1u5ra_          73 RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP---LQEVEIAAVTHGALQGLAYLHSH---NMIHRDV  141 (309)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSC---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHhC---CEeccCC
Confidence            599999999999999999999999999998766654333   89999999999999999999999   9999997

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2e-19  Score=90.69  Aligned_cols=68  Identities=21%  Similarity=0.416  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+ +..++++||+++|+|..++.....   +++..+..++.|++.|+.|+|+.   +++||||
T Consensus        66 ~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~---l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDl  133 (277)
T d1xbba_          66 DNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEES---NFVHRDL  133 (277)
T ss_dssp             CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCCceEEEEecc-CCEEEEEEcCCCCcHHHHHhhccC---CCHHHHHHHHHHHHHHHhhHHhC---CcccCCC
Confidence            59999999999865 457899999999999999876543   88999999999999999999999   9999997

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.6e-19  Score=90.58  Aligned_cols=69  Identities=23%  Similarity=0.439  Sum_probs=60.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+ +..++++||+++|+|..++.....  .+++..+..++.|++.|+.|+|++   +++||||
T Consensus        67 ~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDl  135 (285)
T d1u59a_          67 DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEK---NFVHRDL  135 (285)
T ss_dssp             CCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhhcccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCcC
Confidence            59999999998865 568899999999999998765332  288999999999999999999999   9999997

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=9.2e-20  Score=93.43  Aligned_cols=69  Identities=28%  Similarity=0.355  Sum_probs=63.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+.+|++..++.+.+.   +++..+..++.|++.|+.|+|+ +   +|+||||
T Consensus        62 ~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~---l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDi  131 (322)
T d1s9ja_          62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKH---KIMHRDV  131 (322)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCC
T ss_pred             CCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHhC---CEEcccc
Confidence            599999999999999999999999999999999976543   8899999999999999999996 6   7999997

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.3e-19  Score=90.22  Aligned_cols=69  Identities=29%  Similarity=0.474  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCC--eEecc
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPS--IIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~--i~hrd   74 (75)
                      +||||+++++++.+    +..++++|||+++|+|..++.+...   +++..+..++.|++.|+.|||++   +  |+|||
T Consensus        66 ~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~gl~yLH~~---~~~IiHrD  139 (270)
T d1t4ha_          66 QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLHTR---TPPIIHRD  139 (270)
T ss_dssp             CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSC
T ss_pred             CCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhcccc---ccHHHHHHHHHHHHHHHHHHHHC---CCCEEeCC
Confidence            59999999999865    3468999999999999999876543   88889999999999999999998   6  99999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       140 i  140 (270)
T d1t4ha_         140 L  140 (270)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.4e-19  Score=91.88  Aligned_cols=69  Identities=23%  Similarity=0.340  Sum_probs=64.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++..+++++||+++|++...+...+.   +++..+..++.|++.|+.|+|++   +|+||||
T Consensus        63 ~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~---~~e~~~~~~~~qil~al~ylH~~---~iiHRDl  131 (337)
T d1o6la_          63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHSR---DVVYRDI  131 (337)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCC
T ss_pred             CCCCEEEEEeeeccccccccceeccCCCchhhhhhcccC---CcHHHHHHHHHHHhhhhhhhhhc---Ccccccc
Confidence            599999999999999999999999999999999887554   88899999999999999999999   9999997

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.79  E-value=5e-19  Score=91.96  Aligned_cols=69  Identities=19%  Similarity=0.180  Sum_probs=64.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..+++|||+++|+|..++.....   +++..+..++.|++.|+.|+|..   +++||||
T Consensus        65 ~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDl  133 (364)
T d1omwa3          65 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEIILGLEHMHNR---FVVYRDL  133 (364)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhccc---ccHHHHHHHHHHHHHHHHHHHHC---Cccceee
Confidence            499999999999999999999999999999999876543   78889999999999999999999   9999997

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.3e-19  Score=91.84  Aligned_cols=71  Identities=23%  Similarity=0.473  Sum_probs=62.3

Q ss_pred             CCCceeeEeeEEee----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+    ...+++++||+++|+|.+++..... ..+++..+..++.|++.|+.|||..   +++||||
T Consensus        63 ~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~-~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDi  137 (335)
T d2ozaa1          63 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDV  137 (335)
T ss_dssp             TSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSC-CCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCC-CCcCHHHHHHHHHHHHHHHHHHHHc---CCccccc
Confidence            59999999999875    3568999999999999999976432 2388999999999999999999999   9999997

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=1.1e-18  Score=89.26  Aligned_cols=69  Identities=33%  Similarity=0.539  Sum_probs=63.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+.+|++...+.....   +....+..++.|++.|+.|+|++   +|+||||
T Consensus        62 ~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~---~~~~~~~~~~~qi~~al~~lH~~---~iiHrDi  130 (316)
T d1fota_          62 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR---FPNPVAKFYAAEVCLALEYLHSK---DIIYRDL  130 (316)
T ss_dssp             CBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSS---CCHHHHHHHHHHHHHHHHHHHTT---TEECCCC
T ss_pred             cCcChhheeeeEeeCCeeeeEeeecCCcccccccccccc---ccccHHHHHHHHHHHhhhhhccC---cEEcccc
Confidence            599999999999999999999999999999988876543   77888888999999999999999   9999997

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.9e-19  Score=89.58  Aligned_cols=69  Identities=29%  Similarity=0.467  Sum_probs=60.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.. +..++++||+++|+|.+++.....  .+++..+..++.|++.|+.|||++   +|+||||
T Consensus        62 ~HpnIv~~~~~~~~-~~~~lv~Ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDl  130 (276)
T d1uwha_          62 RHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAK---SIIHRDL  130 (276)
T ss_dssp             CCTTBCCEEEEECS-SSCEEEEECCCEEEHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeeeEEEec-cEEEEEEecCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHhcC---CEecccc
Confidence            59999999998754 568999999999999999865432  288899999999999999999999   9999997

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=7e-19  Score=87.98  Aligned_cols=70  Identities=29%  Similarity=0.578  Sum_probs=62.8

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++||+.+|++..++.....  .+.+..+..++.|++.|+.|||..   +++||||
T Consensus        57 ~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~--~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dl  126 (258)
T d1k2pa_          57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDL  126 (258)
T ss_dssp             CCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGG--CCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCC
T ss_pred             CCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhcccc--CCcHHHHHHHHHHHHHHHHHHhhc---Ccccccc
Confidence            599999999999999999999999999999988765332  278888899999999999999999   9999996

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.2e-18  Score=87.28  Aligned_cols=72  Identities=31%  Similarity=0.522  Sum_probs=63.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-------------CcccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-------------EALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +||||+++++++.+.+..++++||+++|++..++....             ....+++.....++.|++.|+.|+|+.  
T Consensus        69 ~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~--  146 (309)
T d1fvra_          69 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK--  146 (309)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC--
Confidence            49999999999999999999999999999999986431             112378889999999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++|||+
T Consensus       147 -~iiHrDl  153 (309)
T d1fvra_         147 -QFIHRDL  153 (309)
T ss_dssp             -TEECSCC
T ss_pred             -Ccccccc
Confidence             9999997

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.8e-18  Score=86.96  Aligned_cols=70  Identities=29%  Similarity=0.553  Sum_probs=59.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+ +..++++||+++|++.+.+..... ..+++..+..++.|++.|+.|+|..   +|+||||
T Consensus        66 ~HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L~~~~~~~~~-~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDi  135 (272)
T d1qpca_          66 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL  135 (272)
T ss_dssp             CCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHHH-HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEeEEEeeecc-CCeEEEEEeCCCCcHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCcc
Confidence            59999999998754 567899999999999987755322 2278889999999999999999999   9999997

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=3.8e-18  Score=86.68  Aligned_cols=72  Identities=29%  Similarity=0.483  Sum_probs=64.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCCC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHCT   67 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~~   67 (75)
                      +||||+++++++.++...++++||+.+|++..++.....             ...+++..+..++.|++.|+.|+|+.  
T Consensus        77 ~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~--  154 (299)
T d1fgka_          77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK--  154 (299)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             CCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC--
Confidence            599999999999999999999999999999999975321             12378889999999999999999999  


Q ss_pred             CCeEeccC
Q 039179           68 PSIIYRDI   75 (75)
Q Consensus        68 ~~i~hrdl   75 (75)
                       +++||||
T Consensus       155 -~ivHrDi  161 (299)
T d1fgka_         155 -KCIHRDL  161 (299)
T ss_dssp             -TCCCSCC
T ss_pred             -CEEeeee
Confidence             9999997

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=9.4e-18  Score=86.82  Aligned_cols=69  Identities=20%  Similarity=0.335  Sum_probs=64.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+....++++|++.+|++...+.....   +++..+..++.|++.|+.|||+.   +|+||||
T Consensus        99 ~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~---l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDI  167 (350)
T d1rdqe_          99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHSL---DLIYRDL  167 (350)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCcEeecccccccccccccccccccccchhhhHhhcCC---CCHHHHHHHHHHHHHHHHHHHhC---CEecCcC
Confidence            599999999999999999999999999999999876544   89999999999999999999999   9999997

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.74  E-value=4.1e-18  Score=85.72  Aligned_cols=69  Identities=22%  Similarity=0.405  Sum_probs=61.4

Q ss_pred             CCCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++....    ..+++|||+.++++...+...+.   +++..+..++.|++.|+.|+|..   +++||||
T Consensus        65 ~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~---l~~~~~~~i~~qi~~al~~lH~~---~iiHrDi  137 (277)
T d1o6ya_          65 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQN---GIIHRDV  137 (277)
T ss_dssp             CCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCC---CCHHHHHHHHHHHHHHHHHHHhC---CccCccc
Confidence            5999999999987643    47899999999999988876544   88999999999999999999999   9999997

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.5e-18  Score=87.19  Aligned_cols=75  Identities=24%  Similarity=0.411  Sum_probs=54.3

Q ss_pred             CCCceeeEeeEEee--CCeEEEEEecCCCCCHHHHhhccC-CcccCCHHhHHHHHHHHHHHhhHhhhCC--CCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH--KKCMFAIYKYMERGSLCCVLHKEN-EALELNWTNNVNIAKCVAHALSYLHHHC--TPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~~i~hrdl   75 (75)
                      +||||+++++++.+  ++.++++|||+++|+|.+++.... ....+++..+..++.|++.|+.|+|+..  ..+|+||||
T Consensus        61 ~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDi  140 (269)
T d2java1          61 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL  140 (269)
T ss_dssp             CCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------C
T ss_pred             CCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcC
Confidence            59999999999865  456899999999999999886421 1123889999999999999999999861  013999997

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=6e-18  Score=85.41  Aligned_cols=70  Identities=30%  Similarity=0.484  Sum_probs=63.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+++..++++|++.++++...+.....  .+++..+..++.|++.|+.|+|+.   +|+||||
T Consensus        67 ~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDl  136 (283)
T d1mqba_          67 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDL  136 (283)
T ss_dssp             CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccc--cccHHHHHHHHHHHHHhhhhcccc---ccccCcc
Confidence            599999999999999999999999999999888765432  288889999999999999999999   9999997

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.2e-18  Score=86.90  Aligned_cols=72  Identities=28%  Similarity=0.451  Sum_probs=63.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC---------------cccCCHHhHHHHHHHHHHHhhHhhhC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE---------------ALELNWTNNVNIAKCVAHALSYLHHH   65 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~l~~l~~~   65 (75)
                      +||||+++++++.++...++++||+++|++..++.....               ...+++..+..++.|++.|+.|||.+
T Consensus        85 ~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~  164 (311)
T d1t46a_          85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK  164 (311)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            599999999999999999999999999999999875321               11367888899999999999999999


Q ss_pred             CCCCeEeccC
Q 039179           66 CTPSIIYRDI   75 (75)
Q Consensus        66 ~~~~i~hrdl   75 (75)
                         +++||||
T Consensus       165 ---~ivHrDL  171 (311)
T d1t46a_         165 ---NCIHRDL  171 (311)
T ss_dssp             ---TCCCSCC
T ss_pred             ---Ceeeccc
Confidence               9999997

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=7.1e-18  Score=84.72  Aligned_cols=69  Identities=28%  Similarity=0.394  Sum_probs=60.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++. ++..++++||+.+|++..++.....  .+++..+..++.|++.|+.|+|+.   +++||||
T Consensus        66 ~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~--~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDl  134 (273)
T d1mp8a_          66 DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLESK---RFVHRDI  134 (273)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccCC--CCCHHHHHHHHHHHHHHhhhhccc---Ceecccc
Confidence            5999999999986 4678999999999999988765332  288889999999999999999999   9999997

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=6.5e-18  Score=85.46  Aligned_cols=70  Identities=26%  Similarity=0.492  Sum_probs=60.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++++++. ++..++++||+++|++...+..... ..+++..+..++.+++.|+.|||.+   +++||||
T Consensus        70 ~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~-~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~Dl  139 (285)
T d1fmka3          70 RHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL  139 (285)
T ss_dssp             CCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             ccCCEeEEEEEEe-cCCeEEEEEecCCCchhhhhhhccc-ccchHHHHHHHHHHHHHHHHHHhhh---heecccc
Confidence            5999999999885 4568999999999999988865321 1288999999999999999999999   9999997

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.4e-18  Score=86.22  Aligned_cols=71  Identities=25%  Similarity=0.449  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEeeC-CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK-KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..+ +.+++++||+++|++.+++..... ..+++..+..++.|++.|+.|||+.   +++||||
T Consensus        58 ~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dl  129 (262)
T d1byga_          58 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDL  129 (262)
T ss_dssp             CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHhhccccccC---ceecccc
Confidence            599999999998654 568999999999999999865321 2278888999999999999999999   9999997

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.5e-18  Score=85.97  Aligned_cols=69  Identities=25%  Similarity=0.328  Sum_probs=60.4

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..++..++++||+.++.+........   .+++..+..++.|++.|+.|+|++   +++||||
T Consensus        58 ~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDi  126 (299)
T d1ua2a_          58 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSL---VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDL  126 (299)
T ss_dssp             CCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCS---SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhccc---CCCHHHHHHHHHHHHHHHHHhhcc---ceecccC
Confidence            59999999999999999999999998887765554322   278888999999999999999999   9999997

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.4e-17  Score=83.61  Aligned_cols=70  Identities=16%  Similarity=0.271  Sum_probs=59.0

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++...++++|++.++..........  ..+++..+..++.|++.|+.|||+.   +|+||||
T Consensus        59 ~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~--~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDi  128 (298)
T d1gz8a_          59 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDL  128 (298)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCcEEEeccccccccceeEEEeecCCchhhhhhhhcc--cCCCHHHHHHHHHHHHHHHHHhhcC---CEEcccc
Confidence            59999999999999999999999997654443333222  2389999999999999999999999   9999997

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3e-17  Score=82.54  Aligned_cols=69  Identities=29%  Similarity=0.398  Sum_probs=60.5

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.+ ...++++||+.+|++...+.....  .++......++.|++.|+.|+|.+   +++||||
T Consensus        69 ~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDi  137 (273)
T d1u46a_          69 DHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDL  137 (273)
T ss_dssp             CCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCCEEEEEEEEee-cchheeeeeecCcchhhhhhcccC--CCCHHHHHHHHHHHHHHHHHhhhC---CEeeeee
Confidence            59999999999976 467899999999999988765332  288999999999999999999999   9999997

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=8.5e-17  Score=80.82  Aligned_cols=68  Identities=16%  Similarity=0.185  Sum_probs=60.7

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCC-CCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMER-GSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ||||+++++++.+++..++++|++.+ +++...+.....   +++..+..++.|++.|+.|+|++   +++||||
T Consensus        68 h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~---l~e~~~~~~~~qi~~al~~lH~~---~iiHrDi  136 (273)
T d1xwsa_          68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCHNC---GVLHRDI  136 (273)
T ss_dssp             SCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHC---CCccccC
Confidence            89999999999999999999999975 577777765443   88999999999999999999999   9999997

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.1e-16  Score=81.73  Aligned_cols=70  Identities=23%  Similarity=0.495  Sum_probs=60.9

Q ss_pred             CCCceeeEeeEEee-CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH-KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.. ++..++++||+.+|++..++.....  .........++.|++.|+.|+|..   +++||||
T Consensus        86 ~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~--~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDL  156 (311)
T d1r0pa_          86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDL  156 (311)
T ss_dssp             CCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccc--cchHHHHHHHHHHHHHhhhhhccc---CcccCCc
Confidence            59999999999876 4588999999999999998875432  266778889999999999999999   9999997

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.4e-16  Score=81.02  Aligned_cols=71  Identities=25%  Similarity=0.386  Sum_probs=60.4

Q ss_pred             CCCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCC-----CCCeE
Q 039179            1 QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHC-----TPSII   71 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-----~~~i~   71 (75)
                      +||||+++++++..++    .+++++||+.+|++..++.+..    +++.....+..+++.|+.|+|...     ..+|+
T Consensus        55 ~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~----l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~Iv  130 (303)
T d1vjya_          55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA  130 (303)
T ss_dssp             CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEE
T ss_pred             CCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCee
Confidence            5999999999998654    5899999999999999997632    888888999999999999999621     23899


Q ss_pred             eccC
Q 039179           72 YRDI   75 (75)
Q Consensus        72 hrdl   75 (75)
                      ||||
T Consensus       131 HrDl  134 (303)
T d1vjya_         131 HRDL  134 (303)
T ss_dssp             CSCC
T ss_pred             cccc
Confidence            9997

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.6e-16  Score=81.16  Aligned_cols=69  Identities=20%  Similarity=0.414  Sum_probs=59.9

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++.++ ..++++|++.+|++...+.....  .+++..+..++.|++.|+.|||..   +++||||
T Consensus        69 ~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDl  137 (317)
T d1xkka_          69 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDL  137 (317)
T ss_dssp             CCTTBCCEEEEEESS-SEEEEEECCTTCBHHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCCEeeEEEEEecC-CeeEEEEeccCCccccccccccc--CCCHHHHHHHHHHHHHHHHHHHHc---CcccCcc
Confidence            599999999999864 56788899999999888776433  288888999999999999999999   9999997

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.66  E-value=2.3e-16  Score=79.50  Aligned_cols=69  Identities=22%  Similarity=0.340  Sum_probs=61.1

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++.+..++..++++|++.++.+.........   ++...+..++.|++.|+.|+|+.   +|+||||
T Consensus        58 ~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~---l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDi  126 (286)
T d1ob3a_          58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG---LESVTAKSFLLQLLNGIAYCHDR---RVLHRDL  126 (286)
T ss_dssp             CCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred             CCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCC---cchhhhHHHHHHHHHHHHHhccC---cEEecCC
Confidence            599999999999999999999999987777666554332   89999999999999999999999   9999997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=3.5e-16  Score=79.31  Aligned_cols=72  Identities=24%  Similarity=0.372  Sum_probs=60.1

Q ss_pred             CCCceeeEeeEEeeC-CeEEEEEecCCCCCHHHHhhccCC-------------cccCCHHhHHHHHHHHHHHhhHhhhCC
Q 039179            1 QHQNIVKLYGFCLHK-KCMFAIYKYMERGSLCCVLHKENE-------------ALELNWTNNVNIAKCVAHALSYLHHHC   66 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~~   66 (75)
                      +|+||+++++.+..+ ...++++||+++|++..++.....             ...+++..+..++.|++.|+.|+|++ 
T Consensus        75 ~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-  153 (299)
T d1ywna1          75 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-  153 (299)
T ss_dssp             CCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            488999999988765 468999999999999999865321             12267888999999999999999999 


Q ss_pred             CCCeEeccC
Q 039179           67 TPSIIYRDI   75 (75)
Q Consensus        67 ~~~i~hrdl   75 (75)
                        +|+||||
T Consensus       154 --~ivHrDl  160 (299)
T d1ywna1         154 --KCIHRDL  160 (299)
T ss_dssp             --TCCCSCC
T ss_pred             --CCcCCcC
Confidence              9999997

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.7e-16  Score=80.71  Aligned_cols=72  Identities=22%  Similarity=0.239  Sum_probs=55.5

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|+||+++++++....      .+++++||++++..............+++..+..++.|++.|+.|||++   +|+|||
T Consensus        71 ~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrD  147 (350)
T d1q5ka_          71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRD  147 (350)
T ss_dssp             CCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCC
T ss_pred             CCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccC
Confidence            5999999999986532      4789999998764433332111222388999999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       148 i  148 (350)
T d1q5ka_         148 I  148 (350)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=8.4e-16  Score=78.04  Aligned_cols=72  Identities=32%  Similarity=0.519  Sum_probs=62.6

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCC---------------------cccCCHHhHHHHHHHHHHHh
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENE---------------------ALELNWTNNVNIAKCVAHAL   59 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~l   59 (75)
                      +|||++++++++..++..++++|++++|++..++.....                     ...+.+.....++.|++.|+
T Consensus        74 ~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl  153 (301)
T d1lufa_          74 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM  153 (301)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHh
Confidence            599999999999999999999999999999999864221                     11267778899999999999


Q ss_pred             hHhhhCCCCCeEeccC
Q 039179           60 SYLHHHCTPSIIYRDI   75 (75)
Q Consensus        60 ~~l~~~~~~~i~hrdl   75 (75)
                      .|+|..   +++||||
T Consensus       154 ~ylH~~---~ivHrDl  166 (301)
T d1lufa_         154 AYLSER---KFVHRDL  166 (301)
T ss_dssp             HHHHHT---TCCCSCC
T ss_pred             hhcccC---CeEeeEE
Confidence            999999   9999997

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.63  E-value=1.1e-15  Score=78.29  Aligned_cols=66  Identities=17%  Similarity=0.189  Sum_probs=57.6

Q ss_pred             CCCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      .||||+++++++...  ...++++|++.++++....+   .   ++...+..++.|++.|+.|||++   +|+|||+
T Consensus        88 ~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~---~---l~e~~i~~i~~qil~aL~~LH~~---gIvHrDi  155 (328)
T d3bqca1          88 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---T---LTDYDIRFYMYEILKALDYCHSM---GIMHRDV  155 (328)
T ss_dssp             TSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTT---S---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhc---C---CCHHHHHHHHHHHHHHHHHHhhc---ccccccc
Confidence            489999999999754  46899999999999866542   2   88899999999999999999999   9999997

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.3e-15  Score=76.72  Aligned_cols=69  Identities=16%  Similarity=0.250  Sum_probs=62.2

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+||+++.+.+..+...+++++++.++.+.......+.   +....+..++.|++.|+.|+|.+   +|+||||
T Consensus        59 ~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDi  127 (292)
T d1unla_          59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFCHSR---NVLHRDL  127 (292)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CcCCEEeeccccccccceeEEeeeccccccccccccccc---cchhHHHHHHHHHHHHHHHhhcC---CEeeecc
Confidence            589999999999999999999999999888877765433   78889999999999999999999   9999997

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.5e-15  Score=77.77  Aligned_cols=68  Identities=25%  Similarity=0.278  Sum_probs=62.2

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      ||||+++++.+.++...++++|++.+|++...+.....   +.......++.|++.|+.|+|++   +++|||+
T Consensus        88 ~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~---~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDi  155 (322)
T d1vzoa_          88 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHKL---GIIYRDI  155 (322)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCeEEEeeeeeccCCceeeeeecccccHHHHHHHhccc---ccHHHHHHHHHHHHHHHHHhhcC---CEEeccC
Confidence            48999999999999999999999999999999877554   77788888999999999999999   9999996

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.3e-15  Score=77.61  Aligned_cols=72  Identities=21%  Similarity=0.366  Sum_probs=61.7

Q ss_pred             CCCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccC-------CcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEec
Q 039179            1 QHQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKEN-------EALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYR   73 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hr   73 (75)
                      +||||+++++.+..++..++++|++.+|++..++....       ....+....+..++.+++.|+.|||..   +++||
T Consensus        81 ~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHr  157 (308)
T d1p4oa_          81 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHR  157 (308)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCS
T ss_pred             CCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---Ceeec
Confidence            59999999999999999999999999999999886421       111256778888999999999999999   99999


Q ss_pred             cC
Q 039179           74 DI   75 (75)
Q Consensus        74 dl   75 (75)
                      ||
T Consensus       158 Dl  159 (308)
T d1p4oa_         158 DL  159 (308)
T ss_dssp             CC
T ss_pred             eE
Confidence            97

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.1e-15  Score=75.86  Aligned_cols=70  Identities=16%  Similarity=0.350  Sum_probs=56.9

Q ss_pred             CCCceeeEeeEEee-----CCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLH-----KKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~-----~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +||||+++++++..     ....++++|++.++.+........  ..++...+..++.|++.|+.|||..   +|+||||
T Consensus        68 ~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDi  142 (305)
T d1blxa_          68 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDL  142 (305)
T ss_dssp             CCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCC
Confidence            59999999999864     246889999998877654443322  2278888899999999999999999   9999997

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=5.6e-15  Score=76.08  Aligned_cols=67  Identities=19%  Similarity=0.352  Sum_probs=57.1

Q ss_pred             CCCceeeEeeEEeeCC------eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHKK------CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~------~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +|||++++++++...+      .+++++|++ +.++...... ..   ++...+..++.|++.|+.|||++   +|+|||
T Consensus        75 ~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~---l~~~~~~~~~~qi~~aL~~LH~~---~IiHrD  146 (346)
T d1cm8a_          75 RHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EK---LGEDRIQFLVYQMLKGLRYIHAA---GIIHRD  146 (346)
T ss_dssp             CBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred             CCCCeeEEEEEeccCccccccceEEEEEecc-cccHHHHHHh-cc---ccHHHHHHHHHHHHHHHHHHHhC---CCcccc
Confidence            5999999999998654      469999999 5567666643 22   89999999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      |
T Consensus       147 i  147 (346)
T d1cm8a_         147 L  147 (346)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=9.2e-15  Score=75.34  Aligned_cols=68  Identities=16%  Similarity=0.256  Sum_probs=57.0

Q ss_pred             CCCceeeEeeEEeeCC----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|||++++++.+..+.    ..+++++++.+|+|.+++... .   +++..+..++.|++.|+.|||++   +|+||||
T Consensus        64 ~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~-~---l~~~~i~~i~~qil~al~yLH~~---~iiHRDI  135 (345)
T d1pmea_          64 RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ-H---LSNDHICYFLYQILRGLKYIHSA---NVLHRDL  135 (345)
T ss_dssp             CCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHC-C---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             CCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcC-C---CCHHHHHHHHHHHHHHHHHHHHC---CCcCCCC
Confidence            5899999999997653    234555667789999998653 2   89999999999999999999999   9999997

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=9.2e-15  Score=75.57  Aligned_cols=66  Identities=21%  Similarity=0.331  Sum_probs=55.3

Q ss_pred             CCCceeeEeeEEeeC------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEecc
Q 039179            1 QHQNIVKLYGFCLHK------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRD   74 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrd   74 (75)
                      +||||+++++++...      ...++++||+.++.+. .+.  ..   +++..+..++.|++.|+.|||.+   +|+|||
T Consensus        74 ~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~-~~~--~~---~~~~~i~~~~~qil~gl~~LH~~---giiHrD  144 (355)
T d2b1pa1          74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ-VIQ--ME---LDHERMSYLLYQMLCGIKHLHSA---GIIHRD  144 (355)
T ss_dssp             CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHH-HHT--SC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred             CCCCeeEEEEEEecccccccCceeEEEEeccchHHHH-hhh--cC---CCHHHHHHHHHHHHHHHHHhhhc---cccccc
Confidence            599999999999643      5789999999765554 332  22   88899999999999999999999   999999


Q ss_pred             C
Q 039179           75 I   75 (75)
Q Consensus        75 l   75 (75)
                      +
T Consensus       145 l  145 (355)
T d2b1pa1         145 L  145 (355)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=9.3e-15  Score=75.18  Aligned_cols=68  Identities=18%  Similarity=0.263  Sum_probs=57.4

Q ss_pred             CCCceeeEeeEEeeCC-----eEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            1 QHQNIVKLYGFCLHKK-----CMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      +|+|++++++++....     ..+++++++.+|+|..++... .   ++...+..++.|++.|+.|||++   +|+||||
T Consensus        75 ~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~-~---l~e~~~~~i~~qil~aL~~LH~~---giiHrDi  147 (348)
T d2gfsa1          75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-K---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDL  147 (348)
T ss_dssp             CCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTC-C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCC
T ss_pred             CCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccc-c---ccHHHHHHHHHHHHHHHHHHHhC---CCccccc
Confidence            5899999999986432     346667788899999988542 2   89999999999999999999999   9999997

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.50  E-value=1.9e-13  Score=69.16  Aligned_cols=68  Identities=21%  Similarity=0.233  Sum_probs=59.6

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+|++.+++++..+...++++|++ ++++...+.....  .++......++.|++.|+.|+|+.   +|+|||+
T Consensus        60 ~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~--~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDi  127 (293)
T d1csna_          60 CTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDI  127 (293)
T ss_dssp             CTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCC
T ss_pred             CCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhcc--chhhHHHHHHHHHHHHHHHHHHHC---CceeccC
Confidence            588999999999999999999998 6888888765432  288888999999999999999999   9999997

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=5.7e-14  Score=71.55  Aligned_cols=69  Identities=19%  Similarity=0.434  Sum_probs=55.7

Q ss_pred             CCCceeeEeeEEeeC--------CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEe
Q 039179            1 QHQNIVKLYGFCLHK--------KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIY   72 (75)
Q Consensus         1 ~h~~i~~~~~~~~~~--------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~h   72 (75)
                      +|+|++++++.+...        +.+++++|++..+.+........   .++...+..++.|++.|+.|+|++   +|+|
T Consensus        67 ~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~---~~~~~~~~~i~~qil~~l~~lH~~---~ivH  140 (318)
T d3blha1          67 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRN---KILH  140 (318)
T ss_dssp             CCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred             cCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhccc---ccccHHHHHHHHHHHHHHHHhccC---CEEe
Confidence            589999999988653        45789999998776654443322   278888999999999999999999   9999


Q ss_pred             ccC
Q 039179           73 RDI   75 (75)
Q Consensus        73 rdl   75 (75)
                      |||
T Consensus       141 rDl  143 (318)
T d3blha1         141 RDM  143 (318)
T ss_dssp             CCC
T ss_pred             cCc
Confidence            997

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.46  E-value=4.2e-13  Score=67.88  Aligned_cols=68  Identities=13%  Similarity=0.168  Sum_probs=53.2

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |+++..+..+...+...++++|++. +++...+.....  .++...+..++.|++.|+.|+|++   +|+||||
T Consensus        62 ~~~i~~~~~~~~~~~~~~ivme~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDi  129 (299)
T d1ckia_          62 GVGIPTIRWCGAEGDYNVMVMELLG-PSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSK---NFIHRDV  129 (299)
T ss_dssp             STTCCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCcccEEEEEEecCCEEEEEEEEcC-CchhhhhhhccC--CCcHHHHHHHHHHHHHHHHHHHHC---CeeeccC
Confidence            3445666666777888999999985 555555543222  288999999999999999999999   9999997

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.95  E-value=2.3e-09  Score=55.13  Aligned_cols=71  Identities=25%  Similarity=0.292  Sum_probs=49.6

Q ss_pred             CCceeeEeeEEeeC--CeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhh-CCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHK--KCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHH-HCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~--~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~hrdl   75 (75)
                      |+|++++++++...  .....+++++..+..............+....+..++.+++.|+.|+|. .   +|+||||
T Consensus        79 ~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDl  152 (362)
T d1q8ya_          79 ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDI  152 (362)
T ss_dssp             HTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCC
T ss_pred             cCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccC
Confidence            68899999887643  4555666665544322222222222237888899999999999999997 6   8999997

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.51  E-value=8.5e-08  Score=45.52  Aligned_cols=57  Identities=12%  Similarity=0.226  Sum_probs=39.9

Q ss_pred             CCceeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhCCCCCeEeccC
Q 039179            2 HQNIVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHHCTPSIIYRDI   75 (75)
Q Consensus         2 h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~hrdl   75 (75)
                      |.++++.++..  .  .++++|++.+.....          +.......+..+++.++.++|..   +++|||+
T Consensus        73 ~~~v~~~~~~~--~--~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDi  129 (191)
T d1zara2          73 GLAVPKVYAWE--G--NAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYHR---GIVHGDL  129 (191)
T ss_dssp             TSSSCCEEEEE--T--TEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCCcceEEEec--C--CEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccC
Confidence            34555544432  2  268999998754421          33344567889999999999999   9999997

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.34  E-value=0.96  Score=21.49  Aligned_cols=53  Identities=13%  Similarity=0.064  Sum_probs=33.6

Q ss_pred             eeeEeeEEeeCCeEEEEEecCCCCCHHHHhhccCCcccCCHHhHHHHHHHHHHHhhHhhhC
Q 039179            5 IVKLYGFCLHKKCMFAIYKYMERGSLCCVLHKENEALELNWTNNVNIAKCVAHALSYLHHH   65 (75)
Q Consensus         5 i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~   65 (75)
                      +.+++.....++..++++++.++.++.......     -.   ...+..++...+.-+|..
T Consensus        72 vP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~-----~~---~~~~~~~l~~~l~~lH~~  124 (263)
T d1j7la_          72 VPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE-----QS---PEKIIELYAECIRLFHSI  124 (263)
T ss_dssp             CCCEEEEEEETTEEEEEEECCSSEEHHHHTTTC-----SC---HHHHHHHHHHHHHHHHTS
T ss_pred             CCcEEEEEecCCceEEEEEeccccccccccccc-----cc---HHHHHHHHHHHHHHHhcc
Confidence            456666677788889999999988876554221     11   223444555666667764