BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039184
(158 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/142 (56%), Positives = 102/142 (71%), Gaps = 4/142 (2%)
Query: 14 YDVFLSFKGEDTRDNFTSHLYSALSQKGIETFIDND-LKRGDEISQSLVDAIEASSISII 72
YDVFLSF+GEDTR FTSHLY L+ KGI+TF D+ L+ G I L AIE S +I+
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 73 IFSESYASSSWCLDELLRILECKTNYGQIVIPVFYRVDPSHVRKQSGNFEDSFSKLEEQF 132
+FSE+YA+S WCL+EL++I+ECKT + Q VIP+FY VDPSHVR Q +F +F + E ++
Sbjct: 72 VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131
Query: 133 PD---RMQTWRIALTEAANLSG 151
D +Q WRIAL EAANL G
Sbjct: 132 KDDVEGIQRWRIALNEAANLKG 153
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 102/156 (65%), Gaps = 12/156 (7%)
Query: 1 MASSSSSHPRNNKYDVFLSFKGEDTRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQSL 60
MASSSS+ R YDVF SF+GED R+NF SHL KGI TF D+ +KR I L
Sbjct: 1 MASSSSNSWR---YDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHEL 57
Query: 61 VDAIEASSISIIIFSESYASSSWCLDELLRILECKTNYGQIVIPVFYRVDPSHVRKQSGN 120
AI S IS+++FSE+YASSSWCLDEL+ I++CK G V+PVFY+VDPS +RKQ+G
Sbjct: 58 RAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGK 117
Query: 121 FEDSF-----SKLEEQFPDRMQTWRIALTEAANLSG 151
F SF K EE R WR ALT+AAN+ G
Sbjct: 118 FGMSFLETCCGKTEE----RQHNWRRALTDAANILG 149
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 104/154 (67%), Gaps = 6/154 (3%)
Query: 1 MASSSSSHPRNNKYDVFLSFKGEDTRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQSL 60
+ASSS S +YDVF SF+GED RD+F SHL L K I TFID++++R I L
Sbjct: 3 IASSSGSR----RYDVFPSFRGEDVRDSFLSHLLKELRGKAI-TFIDDEIERSRSIGPEL 57
Query: 61 VDAIEASSISIIIFSESYASSSWCLDELLRILECKTNYGQIVIPVFYRVDPSHVRKQSGN 120
+ AI+ S I+I+IFS++YASS+WCL+EL+ I +C TN Q+VIP+F+ VD S V+KQ+G
Sbjct: 58 LSAIKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGE 117
Query: 121 FEDSFSK-LEEQFPDRMQTWRIALTEAANLSGFD 153
F F + + + D Q+W+ AL A ++G+D
Sbjct: 118 FGKVFEETCKAKSEDEKQSWKQALAAVAVMAGYD 151
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 1 MASSSSSHPRNNKYDVFLSFKGEDTRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQSL 60
MA+SSS P VF++F+G+D R+ F S L A+ + I FID D G ++
Sbjct: 1 MAASSSVRPTPTGPQVFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDLVNLF 60
Query: 61 VDAIEASSISIIIFSESYASSSWCLDELLRILECKTNYGQIVIPVFYRVDPSHVRKQSGN 120
V I+ S ++++IFS+ Y SS WCLDEL I +C G IP+FY++ PS V + G
Sbjct: 61 V-RIQESRVAVVIFSKDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSVLELKGG 119
Query: 121 FEDSFSKLEEQF---PDRMQTWRIALTEAANLSGF 152
F D+F L+E++ P+R Q W+ AL L G
Sbjct: 120 FGDTFRVLKEKYKNDPERTQKWQEALESIPKLKGL 154
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 16 VFLSFKGEDTRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEASSISIIIFS 75
VF++F+G+D R F S L AL ++ I FID +RG + SL D I S I+++IFS
Sbjct: 24 VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLI-SLFDTIGESKIALVIFS 82
Query: 76 ESYASSSWCLDELLRILECKTNYGQIVIPVFYRVDPSHVRKQSGNFEDSFSKLEEQF--- 132
E Y S WC+DEL++I E I+IP+FYR+D V+ +G F D+F L +++
Sbjct: 83 EGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQPE 142
Query: 133 PDRMQTWRIALTEAANL 149
P ++ W AL L
Sbjct: 143 PKKLHKWTEALFSVCEL 159
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 96.7 bits (239), Expect = 6e-20, Method: Composition-based stats.
Identities = 55/161 (34%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 2 ASSSSSHPRN-NKYDVFLSFKGEDTRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQSL 60
ASS+ H +Y VF++F+G++ R++F L A+ + I F D RG ++ L
Sbjct: 345 ASSTDDHGITLPQYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLNY-L 403
Query: 61 VDAIEASSISIIIFSESYASSSWCLDELLRILECKTNYGQIVIPVFYRVDPSHVRKQSGN 120
IE S +++ IFSE Y S WCLDEL+++ E +V+PVFYR++ + ++ G
Sbjct: 404 FRRIEESRVAVAIFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNATACKRFMGA 463
Query: 121 FEDSFSKLEEQF---PDRMQTWRIALTEAANLSGFDSHVIR 158
F D+ LE ++ P+R+Q W+ AL+ + G S + R
Sbjct: 464 FGDNLRNLEWEYRSEPERIQKWKEALSSVFSNIGLTSDIRR 504
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 1 MASSSSS-HPRNNKYDVFLSFKGEDTRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQS 59
MASSSS P VF+ F+G D R +F S L AL + I FID + G E++ +
Sbjct: 1 MASSSSVVKPTPTGPQVFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSEMA-N 59
Query: 60 LVDAIEASSISIIIFSESYASSSWCLDELLRILECKTNYGQIVIPVFYRVDPSHVRKQSG 119
L+ IE S ++++IFS + S CL+EL +I E K IVIP+FY+V PS V+ G
Sbjct: 60 LLTRIEESELALVIFSVDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVKFLEG 119
Query: 120 NFEDSFSKLEEQFPDRM---QTWRIAL 143
F D+F LE + Q W+ AL
Sbjct: 120 KFGDNFRALERNNRHMLPITQKWKEAL 146
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 8/88 (9%)
Query: 23 EDTRDNFTSHLYSALSQKGI-ETFIDNDLKRGDEISQSLVDAIEASSISIIIFSESYASS 81
E+ R +F SHL AL +KG+ + FID+D +E SQS+V E + +S++I + S
Sbjct: 14 EEVRYSFVSHLSKALQRKGVNDVFIDSDDSLSNE-SQSMV---ERARVSVMILPGNRTVS 69
Query: 82 SWCLDELLRILECKTNYGQIVIPVFYRV 109
LD+L+++L+C+ N Q+V+PV Y V
Sbjct: 70 ---LDKLVKVLDCQKNKDQVVVPVLYGV 94
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 25/152 (16%)
Query: 5 SSSHPR---NNKYDVFLSFKGED-TRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQSL 60
+ +PR + YDV + + D + ++F SHL ++L ++GI + ++ +E
Sbjct: 656 GNPYPRFSSSKDYDVVIRYGRADISNEDFISHLRASLCRRGISVY-----EKFNE----- 705
Query: 61 VDAIEASSISIIIFSESYASSSWCLDELLRILECKTNYGQIVIPVFYRVDPSHVRKQSGN 120
VDA+ + II+ + +Y S+ LL ILE + ++V P+FYR+ P S N
Sbjct: 706 VDALPKCRVLIIVLTSTYVPSN-----LLNILEHQHTEDRVVYPIFYRLSPYDFVCNSKN 760
Query: 121 FEDSFSKLEEQFPDRMQTWRIALTEAANLSGF 152
+E + D + W+ AL E + G+
Sbjct: 761 YERFY------LQDEPKKWQAALKEITQMPGY 786
>sp|P55546|Y4LF_RHISN Uncharacterized protein y4lF OS=Rhizobium sp. (strain NGR234)
GN=NGR_a02690 PE=4 SV=1
Length = 323
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 16 VFLSFKGED--TRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEASSISIII 73
VF S+ D RD L Q IET+ D + G++I +++ D I I +++
Sbjct: 4 VFFSYSHADEGLRDQLEKQLSMLKRQGVIETWHDRRIGAGEDIHRAIDDHINTDDIILLL 63
Query: 74 FSESYASSSWCLD-ELLRILECKTNYGQIVIPVFYRV 109
S + +S +C D E+ R +E + IVIP+ R
Sbjct: 64 VSADFIASDYCYDIEMQRAMERHHSGEAIVIPIILRA 100
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 23 EDTRDNFTSHLYSALSQKGIETFIDN-DLKRGDEIS----QSLVDAIEASSISIIIFSES 77
E + SHL +AL ++GI F+D L+ S Q L D A + ++I E
Sbjct: 26 ETVLHSLVSHLSAALRREGISVFVDACGLQETKFFSIKQNQPLTDG--ARVLVVVISDEV 83
Query: 78 YASSSWCLDELLRILECKTNYGQIVIPVFYRVD 110
W + L++++ N G +V+PVFY VD
Sbjct: 84 EFYDPW-FPKFLKVIQGWQNNGHVVVPVFYGVD 115
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 23 EDTRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEASSISIIIFSESYASSS 82
ED + L L K I FID + RG + ++L I+ S IS+ IFSES
Sbjct: 51 EDVSKGLINFLEPVLQNKNINVFIDEEEVRGKGL-KNLFKRIQDSKISLAIFSESKCD-- 107
Query: 83 WCLDELLRILECKTNYGQIVIPVFYRVDPS 112
++LL+ E IP+FY+VD +
Sbjct: 108 --FNDLLKNNESADE----AIPIFYKVDAT 131
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 23 EDTRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEASSISIIIFSESYASSS 82
E+ R +F SHL AL +KGI + + +S IE + +S+++ + S
Sbjct: 17 EEVRYSFVSHLSEALRRKGINNVVVDVDIDDLLFKESQA-KIEKAGVSVMVLPGNCDPSE 75
Query: 83 WCLDELLRILEC-KTNYGQIVIPVFY 107
LD+ ++LEC + N Q V+ V Y
Sbjct: 76 VWLDKFAKVLECQRNNKDQAVVSVLY 101
>sp|B2LT65|TLR2_SHEEP Toll-like receptor 2 OS=Ovis aries GN=TLR2 PE=2 SV=1
Length = 784
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ D+ +N + D G I +++D+IE S
Sbjct: 637 RDLCYDAFVSYSERDSYWVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNIIDSIEKS 696
Query: 68 SISIIIFSESYASSSWCLDEL 88
+I + SES+ S WC EL
Sbjct: 697 RKTIFVLSESFVRSEWCKYEL 717
>sp|O60603|TLR2_HUMAN Toll-like receptor 2 OS=Homo sapiens GN=TLR2 PE=1 SV=1
Length = 784
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 18/89 (20%)
Query: 10 RNNKYDVFLSFKGEDT----------RDNFTSHLYSALSQKGIETFIDNDLKRGDEISQS 59
RN YD F+S+ D +NF L ++ D G I +
Sbjct: 637 RNICYDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKR--------DFIPGKWIIDN 688
Query: 60 LVDAIEASSISIIIFSESYASSSWCLDEL 88
++D+IE S ++ + SE++ S WC EL
Sbjct: 689 IIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|B3Y615|TLR2_GORGO Toll-like receptor 2 OS=Gorilla gorilla gorilla GN=TLR2 PE=2 SV=1
Length = 784
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 18/89 (20%)
Query: 10 RNNKYDVFLSFKGEDT----------RDNFTSHLYSALSQKGIETFIDNDLKRGDEISQS 59
RN YD F+S+ D +NF L ++ D G I +
Sbjct: 637 RNICYDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKR--------DFIPGKWIIDN 688
Query: 60 LVDAIEASSISIIIFSESYASSSWCLDEL 88
++D+IE S ++ + SE++ S WC EL
Sbjct: 689 IIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|B3Y613|TLR2_PANTR Toll-like receptor 2 OS=Pan troglodytes GN=TLR2 PE=2 SV=1
Length = 784
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 18/89 (20%)
Query: 10 RNNKYDVFLSFKGEDT----------RDNFTSHLYSALSQKGIETFIDNDLKRGDEISQS 59
RN YD F+S+ D +NF L ++ D G I +
Sbjct: 637 RNICYDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKR--------DFIPGKWIIDN 688
Query: 60 LVDAIEASSISIIIFSESYASSSWCLDEL 88
++D+IE S ++ + SE++ S WC EL
Sbjct: 689 IIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|Q9QUN7|TLR2_MOUSE Toll-like receptor 2 OS=Mus musculus GN=Tlr2 PE=1 SV=1
Length = 784
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 10 RNNKYDVFLSFKGEDTRDNFTSHLYSALSQKGIE--------TFIDNDLKRGDEISQSLV 61
R+ YD F+S+ +D SH L + +E D G I +++
Sbjct: 637 RDVCYDAFVSYSEQD------SHWVENLMVQQLENSDPPFKLCLHKRDFVPGKWIIDNII 690
Query: 62 DAIEASSISIIIFSESYASSSWCLDEL 88
D+IE S ++ + SE++ S WC EL
Sbjct: 691 DSIEKSHKTVFVLSENFVRSEWCKYEL 717
>sp|B3Y614|TLR2_PANPA Toll-like receptor 2 OS=Pan paniscus GN=TLR2 PE=2 SV=1
Length = 784
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 18/89 (20%)
Query: 10 RNNKYDVFLSFKGEDT----------RDNFTSHLYSALSQKGIETFIDNDLKRGDEISQS 59
RN YD F+S+ D +NF L ++ D G I +
Sbjct: 637 RNICYDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKR--------DFIPGKWIIDN 688
Query: 60 LVDAIEASSISIIIFSESYASSSWCLDEL 88
++D+IE S ++ + SE++ S WC EL
Sbjct: 689 IIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|Q2PZH4|TLR2_BUBBU Toll-like receptor 2 OS=Bubalus bubalis GN=TLR2 PE=2 SV=1
Length = 784
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ +D+ +N + D G I +++D+IE S
Sbjct: 637 RDICYDAFVSYSEQDSYWVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKS 696
Query: 68 SISIIIFSESYASSSWCLDEL 88
+I + SE++ S WC EL
Sbjct: 697 HKTIFVLSENFVKSEWCKYEL 717
>sp|Q0GC71|TLR2_CAPHI Toll-like receptor 2 OS=Capra hircus GN=TLR2 PE=2 SV=1
Length = 784
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ +D+ +N + D G I +++D+IE S
Sbjct: 637 RDLCYDAFVSYSEQDSYWVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNIIDSIEKS 696
Query: 68 SISIIIFSESYASSSWCLDEL 88
+I + SE++ S WC EL
Sbjct: 697 RKTIFVLSENFVRSEWCKYEL 717
>sp|B2LT62|TLR2_CAPIB Toll-like receptor 2 OS=Capra ibex GN=TLR2 PE=3 SV=1
Length = 784
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ +D+ +N + D G I +++D+IE S
Sbjct: 637 RDLCYDAFVSYSEQDSYWVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNIIDSIEKS 696
Query: 68 SISIIIFSESYASSSWCLDEL 88
+I + SE++ S WC EL
Sbjct: 697 RKTIFVLSENFVRSEWCKYEL 717
>sp|B5T267|TLR2_BOSIN Toll-like receptor 2 OS=Bos indicus GN=TLR2 PE=3 SV=1
Length = 784
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ D+ +N + D G I +++D+IE S
Sbjct: 637 RDICYDAFVSYSERDSYWVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKS 696
Query: 68 SISIIIFSESYASSSWCLDEL 88
+I + SE++ S WC EL
Sbjct: 697 HKTIFVLSENFVKSEWCKYEL 717
>sp|Q689D1|TLR2_CANFA Toll-like receptor 2 OS=Canis familiaris GN=TLR2 PE=2 SV=1
Length = 785
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ D+ +N + D G I +++D+IE S
Sbjct: 638 RDVCYDAFVSYSEHDSYWVENLLVQKLEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKS 697
Query: 68 SISIIIFSESYASSSWCLDEL 88
+I + SE++ S WC EL
Sbjct: 698 RKTIFVLSENFVKSEWCKYEL 718
>sp|Q9DD78|TLR21_CHICK Toll-like receptor 2 type-1 OS=Gallus gallus GN=TLR2-1 PE=2 SV=1
Length = 793
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 14 YDVFLSFKGEDTRDNFTSHLYSALSQKGIETFI----DNDLKRGDEISQSLVDAIEASSI 69
YD F+S+ D+ N+ ++ ++ F D G I +++D+IE S
Sbjct: 650 YDAFVSYSENDS--NWVENIMVQQLEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHK 707
Query: 70 SIIIFSESYASSSWCLDEL 88
++ + SE + S WC EL
Sbjct: 708 TLFVLSEHFVQSEWCKYEL 726
>sp|Q9DGB6|TLR22_CHICK Toll-like receptor 2 type-2 OS=Gallus gallus GN=TLR2-2 PE=2 SV=1
Length = 781
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 14 YDVFLSFKGEDTRDNFTSHLYSALSQKGIETFI----DNDLKRGDEISQSLVDAIEASSI 69
YD F+S+ D+ N+ ++ ++ F D G I +++D+IE S
Sbjct: 638 YDAFVSYSENDS--NWVENIMVQQLEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHK 695
Query: 70 SIIIFSESYASSSWCLDEL 88
++ + SE + S WC EL
Sbjct: 696 TLFVLSEHFVQSEWCKYEL 714
>sp|Q95LA9|TLR2_BOVIN Toll-like receptor 2 OS=Bos taurus GN=TLR2 PE=2 SV=1
Length = 784
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ D+ +N + D G I +++D+IE S
Sbjct: 637 RDICYDAFVSYSERDSYWVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKS 696
Query: 68 SISIIIFSESYASSSWCLDEL 88
+I + SE++ S WC EL
Sbjct: 697 HKTIFVLSENFVKSEWCKYEL 717
>sp|B2LT61|TLR2_BISBI Toll-like receptor 2 OS=Bison bison GN=TLR2 PE=3 SV=1
Length = 784
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ D+ +N + D G I +++D+IE S
Sbjct: 637 RDICYDAFVSYSERDSYWVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKS 696
Query: 68 SISIIIFSESYASSSWCLDEL 88
+I + SE++ S WC EL
Sbjct: 697 HKTIFVLSENFVXSEWCKYEL 717
>sp|B2LT64|TLR2_GIRCA Toll-like receptor 2 OS=Giraffa camelopardalis GN=TLR2 PE=3 SV=1
Length = 784
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 10 RNNKYDVFLSFKGEDTRDNFTSHLYSALSQKGIETF--------IDNDLKRGDEISQSLV 61
R+ YD F+S+ D S+ L + +E F D G I +++
Sbjct: 637 RDICYDAFVSYSERD------SYWVENLMVRELEHFDPPFKLCLHKRDFIPGKWIIDNII 690
Query: 62 DAIEASSISIIIFSESYASSSWCLDEL 88
D+IE S +I + SE++ S WC EL
Sbjct: 691 DSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|Q2V897|TLR2_BOSTR Toll-like receptor 2 OS=Boselaphus tragocamelus GN=TLR2 PE=2 SV=1
Length = 784
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ D+ +N + D G I +++D+IE S
Sbjct: 637 RDICYDAFVSYSERDSYWVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKS 696
Query: 68 SISIIIFSESYASSSWCLDEL 88
+I + SE++ S WC EL
Sbjct: 697 HKTIFVLSENFVKSEWCKYEL 717
>sp|Q6T752|TLR2_HORSE Toll-like receptor 2 OS=Equus caballus GN=TLR2 PE=2 SV=1
Length = 784
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ D+ +N + D G I +++D+IE S
Sbjct: 637 RDICYDAFVSYSERDSYWVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKS 696
Query: 68 SISIIIFSESYASSSWCLDEL 88
+I + SE++ S WC EL
Sbjct: 697 HKTIFVLSENFVKSEWCKYEL 717
>sp|Q2IBG7|MET_EULMM Hepatocyte growth factor receptor OS=Eulemur macaco macaco GN=MET
PE=3 SV=1
Length = 1382
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 53 GDEISQSLVDAIEAS---SISIIIFSESYASSSWCLDELLRILECKTNY--GQIVIPVFY 107
G +I++ ++ + S S +F+ S+ WC D+ +R EC + +I +P +
Sbjct: 508 GKKITKIPLNGLGCGHFQSCSQCLFAPSFVQCGWCHDKCVRSEECPSGIWTQEICLPAIH 567
Query: 108 RVDPSHVRKQSGNF 121
+V P+ + G
Sbjct: 568 KVFPTSAPLEGGTM 581
>sp|B3Y618|TLR2_MACMU Toll-like receptor 2 OS=Macaca mulatta GN=TLR2 PE=2 SV=1
Length = 784
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 18/89 (20%)
Query: 10 RNNKYDVFLSFKGEDT----------RDNFTSHLYSALSQKGIETFIDNDLKRGDEISQS 59
R+ YD F+S+ D +NF L ++ D G I +
Sbjct: 637 RDICYDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKR--------DFIPGKWIIDN 688
Query: 60 LVDAIEASSISIIIFSESYASSSWCLDEL 88
++D+IE S ++ + SE++ S WC EL
Sbjct: 689 IIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|Q95M53|TLR2_MACFA Toll-like receptor 2 OS=Macaca fascicularis GN=TLR2 PE=2 SV=1
Length = 784
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 18/89 (20%)
Query: 10 RNNKYDVFLSFKGEDT----------RDNFTSHLYSALSQKGIETFIDNDLKRGDEISQS 59
R+ YD F+S+ D +NF L ++ D G I +
Sbjct: 637 RDICYDAFVSYSERDAYWVENLMVQELENFNPPFKLCLHKR--------DFIPGKWIIDN 688
Query: 60 LVDAIEASSISIIIFSESYASSSWCLDEL 88
++D+IE S ++ + SE++ S WC EL
Sbjct: 689 IIDSIEKSHKTVFVLSENFVKSEWCKYEL 717
>sp|Q2IBD8|MET_PONAB Hepatocyte growth factor receptor OS=Pongo abelii GN=MET PE=3 SV=1
Length = 1390
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 68 SISIIIFSESYASSSWCLDELLRILECKTN--YGQIVIPVFYRVDPSHVRKQSG 119
S S + + + WC D+ +R EC + QI +P Y+V PS + G
Sbjct: 525 SCSQCLSAPPFVQCGWCHDKCVRSEECSSGTWTQQICLPAIYKVFPSSAPLEGG 578
>sp|Q9R1F8|TLR2_CRIGR Toll-like receptor 2 OS=Cricetulus griseus GN=TLR2 PE=2 SV=2
Length = 784
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 8/115 (6%)
Query: 10 RNNKYDVFLSFKGEDTR--DNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEAS 67
R+ YD F+S+ +D+ +N D G I +++D+IE S
Sbjct: 637 RDICYDAFVSYSEQDSYWVENLMVQQLENSEPPFKLCLHKRDFVPGKWIIDNIIDSIEKS 696
Query: 68 SISIIIFSESYASSSWCLDEL----LRILECKTNYGQIVI--PVFYRVDPSHVRK 116
++ + SE++ S WC EL R+ + + G +V+ P+ + P K
Sbjct: 697 HKTLFVLSENFVRSEWCKYELDFSHFRLFDENNDAGILVLLEPIEKKAIPQRFCK 751
>sp|O73755|GREM1_CHICK Gremlin-1 OS=Gallus gallus GN=GREM1 PE=2 SV=1
Length = 184
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 21/104 (20%)
Query: 52 RGDEISQSLVDAIEASSISIIIFSESYASSSWCLDELLR--ILECKTN---------YGQ 100
RG S + +E+S ++ I Y WC + L+ I E N YGQ
Sbjct: 62 RGKGTSMPAEEVLESSQEALHITERKYLKRDWCKTQPLKQTIHEEGCNSRTIINRFCYGQ 121
Query: 101 IVIPVFYRVDPSHVRKQSGNFED-SFSKLEEQFPDRMQTWRIAL 143
FY P HVRK+ G+F+ SF K P + T + L
Sbjct: 122 CN--SFY--IPRHVRKEEGSFQSCSFCK-----PKKFTTMTVTL 156
>sp|Q09YK0|MET_MUNMU Hepatocyte growth factor receptor OS=Muntiacus muntjak GN=MET PE=3
SV=1
Length = 1382
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 68 SISIIIFSESYASSSWCLDELLRILECKTN--YGQIVIPVFYRVDPSHVRKQSG 119
S S + + S+ WC D+ +R+ EC + + +P Y+V P+ + G
Sbjct: 526 SCSQCLSAPSFVQCGWCRDKCVRLEECPSGTWTQETCLPAIYKVFPTSAPLEGG 579
>sp|P12916|POLG_HRV1B Genome polyprotein OS=Human rhinovirus 1B PE=1 SV=3
Length = 2157
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 16 VFLSFKGEDTRDNFT---SHLYSALSQKGIE----TFIDNDLKRGDEISQSLVDAIEASS 68
V + K D +N T S L AL + G++ TF+ ++L++ ++IS IEASS
Sbjct: 1818 VTMGIKKRDLINNKTKDISRLKEALDKYGVDLPMITFLKDELRKKEKISAGKTRVIEASS 1877
Query: 69 IS-IIIFSESYAS 80
I+ I+F ++ +
Sbjct: 1878 INDTILFRTTFGN 1890
>sp|Q769I5|MET_BOVIN Hepatocyte growth factor receptor OS=Bos taurus GN=MET PE=2 SV=1
Length = 1384
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 68 SISIIIFSESYASSSWCLDELLRILECKTN--YGQIVIPVFYRVDPSHVRKQSG 119
S S + + S+ WC D+ +R+ EC + + +P Y+V P+ + G
Sbjct: 526 SCSQCLSAPSFVQCGWCHDKCVRLEECSSGTWTQETCLPTIYKVFPTSAPLEGG 579
>sp|P08953|TOLL_DROME Protein toll OS=Drosophila melanogaster GN=Tl PE=1 SV=1
Length = 1097
Score = 30.4 bits (67), Expect = 4.8, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 10 RNNKYDVFLSFKGEDTRDNFTSHLYSALSQKGIETFI----DNDLKRGDEISQSLVDAIE 65
++ K+D F+S+ +D +F + G + F + D G I ++++ ++
Sbjct: 855 KDKKFDAFISYSHKD--QSFIEDYLVPQLEHGPQKFQLCVHERDWLVGGHIPENIMRSVA 912
Query: 66 ASSISIIIFSESYASSSWCLDELLRILECKTNYGQIVIPVFYRVDPSHVRK 116
S +II+ S+++ S W E N G+ I V D V K
Sbjct: 913 DSRRTIIVLSQNFIKSEWARLEFRAAHRSALNEGRSRIIVIIYSDIGDVEK 963
>sp|P58429|SFSA_AGRT5 Sugar fermentation stimulation protein homolog OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=sfsA PE=3 SV=1
Length = 239
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 10 RNNKYDVFLSFKGEDTRDNFTSHLYSALSQKGIETFIDNDLKRGDEISQSLVDAIEASSI 69
RN++ D LS G +++ + +KG+ F D KRG + + L DA EA
Sbjct: 114 RNSRIDFLLSEPGRPDAYVEVKNVHF-MREKGLAEFPDTATKRGAKHLEELGDAAEAGYR 172
Query: 70 SIIIF 74
S++++
Sbjct: 173 SVMLY 177
>sp|P58753|TIRAP_HUMAN Toll/interleukin-1 receptor domain-containing adapter protein
OS=Homo sapiens GN=TIRAP PE=1 SV=2
Length = 221
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 2 ASSSSSHPRNNKYDVFLSFKGED--TRDNFTSHLYSALSQKGIETFID-NDLKRGDEISQ 58
AS S S + YDV + ED + S+L S + F+ D G I
Sbjct: 74 ASDSGSSRWSKDYDVCVCHSEEDLVAAQDLVSYLEG--STASLRCFLQLRDATPGGAIVS 131
Query: 59 SLVDAIEASSISIIIFSESYASSSWCLDELLRILECKTNYGQIVIPVF 106
L A+ +S +++ + + WC ++L+ L IP+
Sbjct: 132 ELCQALSSSHCRVLLITPGFLQDPWCKYQMLQALTEAPGAEGCTIPLL 179
>sp|Q5FKI5|SYH_LACAC Histidine--tRNA ligase OS=Lactobacillus acidophilus (strain ATCC
700396 / NCK56 / N2 / NCFM) GN=hisS PE=3 SV=1
Length = 428
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 20 FKGEDTRDNFTSHLYSALSQKGIETFIDNDLKRG 53
F +DT++NF S L L Q GI+ ID+DL RG
Sbjct: 228 FLDDDTKNNFESIL-KMLDQLGIDYVIDDDLVRG 260
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,132,708
Number of Sequences: 539616
Number of extensions: 2112967
Number of successful extensions: 5890
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 5840
Number of HSP's gapped (non-prelim): 62
length of query: 158
length of database: 191,569,459
effective HSP length: 108
effective length of query: 50
effective length of database: 133,290,931
effective search space: 6664546550
effective search space used: 6664546550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)