Query 039195
Match_columns 195
No_of_seqs 113 out of 152
Neff 2.8
Searched_HMMs 29240
Date Mon Mar 25 11:58:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039195.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039195hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kwu_A MUNC13-1; calcium bindi 98.9 3E-09 1E-13 78.6 6.1 48 136-193 12-59 (148)
2 2ep6_A MCTP2 protein; beta san 98.8 7.2E-09 2.5E-13 75.5 6.0 46 138-193 10-55 (133)
3 1wfj_A Putative elicitor-respo 98.7 1E-08 3.5E-13 74.4 4.6 43 139-191 8-50 (136)
4 1gmi_A Protein kinase C, epsil 98.7 6.6E-09 2.3E-13 76.4 3.5 58 136-193 1-60 (136)
5 2fk9_A Protein kinase C, ETA t 98.6 2.5E-08 8.6E-13 78.4 4.8 58 137-194 25-83 (157)
6 2bwq_A Regulating synaptic mem 98.6 3.6E-08 1.2E-12 70.7 5.1 44 140-193 17-65 (129)
7 3pyc_A E3 ubiquitin-protein li 98.6 6.1E-08 2.1E-12 70.4 5.7 44 141-194 5-50 (132)
8 2chd_A Rabphilin-3A, exophilin 98.6 5.7E-08 1.9E-12 71.2 5.4 45 139-193 27-76 (142)
9 3rdl_A Protein kinase C alpha 98.6 6.5E-08 2.2E-12 69.8 5.3 45 139-193 14-63 (137)
10 2d8k_A Synaptotagmin VII; exoc 98.6 7.7E-08 2.6E-12 70.6 5.3 45 139-193 24-71 (141)
11 3b7y_A E3 ubiquitin-protein li 98.5 8.3E-08 2.8E-12 71.1 4.6 46 138-193 17-68 (153)
12 1rsy_A Synaptotagmin I; calciu 98.5 1.1E-07 3.7E-12 71.1 5.1 45 139-193 40-87 (152)
13 3f04_A Synaptotagmin-1; C2A, c 98.5 9.5E-08 3.2E-12 70.1 4.7 45 139-193 32-79 (143)
14 2dmh_A Myoferlin; beta-sandwic 98.5 1.3E-07 4.5E-12 68.9 5.4 44 139-193 5-48 (140)
15 1rlw_A Phospholipase A2, CALB 98.5 4.9E-08 1.7E-12 69.8 3.0 44 140-193 2-51 (126)
16 2cm5_A Rabphilin-3A; protein t 98.5 1.3E-07 4.5E-12 71.5 5.4 45 139-193 35-84 (166)
17 2b3r_A Phosphatidylinositol-4- 98.5 1.3E-07 4.5E-12 69.8 5.3 44 139-193 18-66 (134)
18 1v27_A Regulating synaptic mem 98.5 6.4E-08 2.2E-12 70.2 3.3 44 140-193 20-68 (141)
19 2q3x_A Regulating synaptic mem 98.5 7.3E-08 2.5E-12 74.1 3.7 65 115-193 8-78 (171)
20 1tjx_A Similar to synaptotagmi 98.5 1.5E-07 5.2E-12 70.5 5.2 45 139-193 23-72 (159)
21 3n5a_A Synaptotagmin-7; calciu 98.5 1.5E-07 5E-12 67.8 4.9 44 140-193 15-63 (138)
22 1a25_A CALB, protein kinase C 98.5 1.7E-07 5.6E-12 69.6 5.2 44 140-193 30-78 (149)
23 2nq3_A Itchy homolog E3 ubiqui 98.5 1.6E-07 5.3E-12 73.6 5.0 48 137-194 32-79 (173)
24 2dmg_A KIAA1228 protein; beta- 98.4 2.2E-07 7.7E-12 68.0 5.1 44 139-193 22-70 (142)
25 1w15_A Synaptotagmin IV; metal 98.4 2.3E-07 7.9E-12 68.9 5.1 45 139-193 28-77 (153)
26 1rh8_A Piccolo protein; beta-s 98.4 6E-08 2E-12 70.8 1.8 34 140-183 17-50 (142)
27 3fdw_A Synaptotagmin-like prot 98.4 2.4E-07 8.4E-12 68.6 4.7 45 140-193 22-71 (148)
28 1ugk_A Synaptotagmin IV, KIAA1 98.4 2.3E-07 8E-12 67.8 4.4 46 139-193 20-68 (138)
29 3fbk_A RGS3, RGP3, regulator o 98.4 3.4E-07 1.1E-11 68.6 5.0 45 138-193 24-73 (153)
30 2z0u_A WW domain-containing pr 98.4 2.1E-07 7.3E-12 71.5 3.9 45 139-193 41-91 (155)
31 3nsj_A Perforin-1; pore formin 98.4 3.5E-07 1.2E-11 84.6 5.7 44 139-193 392-435 (540)
32 1dqv_A Synaptotagmin III; beta 98.3 5E-07 1.7E-11 74.3 5.0 45 139-193 18-65 (296)
33 2enp_A B/K protein; C2 type 1, 98.3 7.7E-07 2.6E-11 65.7 5.3 51 139-193 24-78 (147)
34 3jzy_A Intersectin 2; C2 domai 98.3 8.3E-07 2.8E-11 77.0 5.7 47 137-193 383-429 (510)
35 2r83_A Synaptotagmin-1; C2A-C2 98.3 7.6E-07 2.6E-11 71.6 5.0 45 139-193 17-64 (284)
36 1wfm_A Synaptotagmin XIII; C2 98.0 7.4E-06 2.5E-10 60.5 4.9 42 139-193 24-69 (138)
37 2r83_A Synaptotagmin-1; C2A-C2 97.9 9.3E-06 3.2E-10 65.3 5.2 44 140-193 149-197 (284)
38 1dqv_A Synaptotagmin III; beta 97.9 7.4E-06 2.5E-10 67.3 4.4 44 140-193 151-199 (296)
39 2cjt_A UNC-13 homolog A, MUNC1 97.9 8.1E-06 2.8E-10 60.9 3.5 39 138-191 2-40 (131)
40 1cjy_A CPLA2, protein (cytosol 97.7 1.6E-05 5.4E-10 76.7 2.7 50 134-193 11-66 (749)
41 3pfq_A PKC-B, PKC-beta, protei 97.5 7E-05 2.4E-09 68.8 4.8 46 138-193 169-219 (674)
42 1djx_A PLC-D1, phosphoinositid 97.5 0.0001 3.5E-09 68.8 5.5 48 138-193 494-546 (624)
43 2zkm_X 1-phosphatidylinositol- 95.7 0.0087 3E-07 57.7 4.6 39 138-190 675-720 (799)
44 3l9b_A Otoferlin; C2-domain, b 95.6 0.0095 3.3E-07 47.7 4.0 35 142-191 22-56 (144)
45 3qr0_A Phospholipase C-beta (P 95.3 0.016 5.6E-07 56.3 5.2 38 140-191 649-693 (816)
46 3ohm_B 1-phosphatidylinositol- 94.0 0.034 1.2E-06 54.7 3.8 38 141-192 725-768 (885)
47 3m7f_B E3 ubiquitin-protein li 79.9 1.1 3.9E-05 33.6 2.8 27 138-164 5-37 (176)
48 1yrk_A NPKC-delta, protein kin 50.3 49 0.0017 25.9 6.7 36 139-184 4-39 (126)
49 2enj_A NPKC-theta, protein kin 48.4 46 0.0016 26.5 6.3 38 139-185 8-45 (138)
50 3bxj_A RAS GTPase-activating p 27.6 11 0.00039 33.6 -0.4 25 139-163 9-34 (483)
51 2cjs_A UNC-13 homolog A, MUNC1 21.8 52 0.0018 25.1 2.5 24 140-163 13-39 (167)
No 1
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=98.87 E-value=3e-09 Score=78.55 Aligned_cols=48 Identities=25% Similarity=0.369 Sum_probs=42.3
Q ss_pred hhhcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCeeEEEeeeecc
Q 039195 136 HEMYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQEIRMKCWWSW 193 (195)
Q Consensus 136 rE~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~~Kt~v~w~~ 193 (195)
++++.|.|.|+|++|.||+..|.. |.+||||++.+++++.||+++..|
T Consensus 12 ~~~~~~~L~V~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~kT~~~~~t 59 (148)
T 3kwu_A 12 TSKWSAKISITVVCAQGLQAKDKT----------GSSDPYVTVQVGKTKKRTKTIYGN 59 (148)
T ss_dssp ---CCEEEEEEEEEEESCCCCSTT----------SCCCEEEEEEETTEEEECCCCCSC
T ss_pred ccccccEEEEEEEeeeCCCCCCCC----------CCcCeEEEEEECCEEEECCccCCC
Confidence 456789999999999999999988 899999999999999999997665
No 2
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=98.80 E-value=7.2e-09 Score=75.45 Aligned_cols=46 Identities=28% Similarity=0.371 Sum_probs=42.0
Q ss_pred hcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCeeEEEeeeecc
Q 039195 138 MYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQEIRMKCWWSW 193 (195)
Q Consensus 138 ~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~~Kt~v~w~~ 193 (195)
...|.|.|+|++|+||+..|.. |++||||++.+++++.||+++..|
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~kT~~~~~t 55 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFS----------GKSDPFCLLELGNDRLQTHTVYKN 55 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSS----------SCCCEEEEEEETTEEEECCCCSSC
T ss_pred CCceEEEEEEEeeECCCCCCCC----------CCcCeEEEEEECCEEEEeeeecCC
Confidence 3579999999999999999987 899999999999999999987665
No 3
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=98.72 E-value=1e-08 Score=74.43 Aligned_cols=43 Identities=23% Similarity=0.210 Sum_probs=40.3
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCeeEEEeeee
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQEIRMKCWW 191 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~~Kt~v~w 191 (195)
..|.|.|+|++|+||+..|.. |++||||++++++++.||++..
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~kT~~~~ 50 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFL----------NNMDPYVQLTCRTQDQKSNVAE 50 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSS----------CSSCCCEEEESSSCEEECCCCT
T ss_pred CcEEEEEEEEeccCCCCcccC----------CCcCceEEEEECCccceeEecc
Confidence 569999999999999999988 8999999999999999998876
No 4
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=98.71 E-value=6.6e-09 Score=76.36 Aligned_cols=58 Identities=17% Similarity=0.160 Sum_probs=41.3
Q ss_pred hhhcceeEEEEEEeecCCCCCCccccccccC-CCCCCCCceEEEEecCee-EEEeeeecc
Q 039195 136 HEMYDGQLFIKLEKCFNLPAMDPWITHACST-GFLGTSDPYVVMELDGQE-IRMKCWWSW 193 (195)
Q Consensus 136 rE~y~G~L~V~Vvra~nLp~~D~~~~~a~~~-~~gGsSDPYVVL~l~~Q~-~Kt~v~w~~ 193 (195)
|++..|.|+|+|++|.||+.+|....+..+. .-++.|||||++++++++ .||+++..|
T Consensus 1 m~~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t 60 (136)
T 1gmi_A 1 MVVFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKT 60 (136)
T ss_dssp CCCEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSC
T ss_pred CcccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCC
Confidence 3577899999999999999999762110000 001349999999999887 477776654
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=98.63 E-value=2.5e-08 Score=78.42 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=42.2
Q ss_pred hhcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCee-EEEeeeeccc
Q 039195 137 EMYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQE-IRMKCWWSWK 194 (195)
Q Consensus 137 E~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~-~Kt~v~w~~k 194 (195)
.+..|.|.|+|++|.||+++|....+.....-.|+|||||+|++++++ .||+++..|.
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktl 83 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTN 83 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCS
T ss_pred ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCC
Confidence 367899999999999999999541110000011689999999999987 5888876653
No 6
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.62 E-value=3.6e-08 Score=70.74 Aligned_cols=44 Identities=23% Similarity=0.284 Sum_probs=39.8
Q ss_pred ceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEe-----cCeeEEEeeeecc
Q 039195 140 DGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMEL-----DGQEIRMKCWWSW 193 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l-----~~Q~~Kt~v~w~~ 193 (195)
.|.|.|+|++|+||+..|.. |++||||++.+ +.++.||+++..|
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~----------~~~dpyv~v~~~~~~~~~~~~kT~v~~~t 65 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDG----------RPRNPYVKIYFLPDRSDKNKRRTKTVKKT 65 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTS----------CCBCEEEEEEEESSCSGGGEEECCCCSSB
T ss_pred CCEEEEEEEEeeCCCCCCCC----------CCCCCEEEEEEecCCCCCcceecccccCC
Confidence 58999999999999999987 89999999999 6788999987665
No 7
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=98.59 E-value=6.1e-08 Score=70.42 Aligned_cols=44 Identities=18% Similarity=0.132 Sum_probs=39.1
Q ss_pred eeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC--eeEEEeeeeccc
Q 039195 141 GQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG--QEIRMKCWWSWK 194 (195)
Q Consensus 141 G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~--Q~~Kt~v~w~~k 194 (195)
..|.|+|++|.||+.+|.+ |.|||||++.+++ +..||+++..|.
T Consensus 5 ~~L~V~v~~a~~L~~~d~~----------g~sDpyv~v~~~~~~~~~kT~v~~~t~ 50 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFF----------RLPDPFAKIVVDGSGQCHSTDTVKNTL 50 (132)
T ss_dssp EEEEEEEEEEESCCCCSTT----------CCCCEEEEEEETTTCCEEECCCCSSCS
T ss_pred EEEEEEEEEeECCCCCCCC----------CCcCeEEEEEECCCCceEECCccCCCC
Confidence 4699999999999999988 8999999999985 888999886653
No 8
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=98.59 E-value=5.7e-08 Score=71.19 Aligned_cols=45 Identities=27% Similarity=0.351 Sum_probs=40.5
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC-----eeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG-----QEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~-----Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+..|.. |.+||||++.+.+ ++.||+++..|
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~~~~~~kT~v~~~t 76 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSN----------GLADPYVKLHLLPGASKSNKLRTKTLRNT 76 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTT----------SCCCEEEEEEEESCCSGGGEEECCCCCSC
T ss_pred CCCEEEEEEEEecCCCCCCCC----------CCCCCEEEEEEEcCCCCcceeeCCcCCCC
Confidence 478999999999999999987 8999999999986 78899988765
No 9
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=98.58 E-value=6.5e-08 Score=69.84 Aligned_cols=45 Identities=36% Similarity=0.499 Sum_probs=40.4
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEe-----cCeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMEL-----DGQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l-----~~Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+..|.. |.+||||++.+ +.+..||+++..|
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~----------~~~dpyv~v~~~~~~~~~~~~kT~~~~~t 63 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPN----------GLSDPYVKLKLIPDPKNESKQKTKTIRST 63 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTT----------SCCCEEEEEEEECCTTCCCCEECCCCCSC
T ss_pred cCCEEEEEEEEeeCCCCCCCC----------CCCCeeEEEEEEcCCCCCeeecCceEcCC
Confidence 469999999999999999988 89999999999 6788899887654
No 10
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.55 E-value=7.7e-08 Score=70.60 Aligned_cols=45 Identities=33% Similarity=0.381 Sum_probs=39.5
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEec---CeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELD---GQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~---~Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+..|.. |.+||||++.+. .++.||+++..|
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~~~~kT~v~~~t 71 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFS----------GTSDPFVKIYLLPDKKHKLETKVKRKN 71 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSS----------SCCCEEEEEEEESCCSSEEECCCCTTC
T ss_pred CCCEEEEEEEEeECCCCCCCC----------CCCCcEEEEEEECCCCccEeCceEcCC
Confidence 368999999999999999987 899999999994 578899887654
No 11
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=98.51 E-value=8.3e-08 Score=71.12 Aligned_cols=46 Identities=22% Similarity=0.239 Sum_probs=34.0
Q ss_pred hcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC------eeEEEeeeecc
Q 039195 138 MYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG------QEIRMKCWWSW 193 (195)
Q Consensus 138 ~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~------Q~~Kt~v~w~~ 193 (195)
--.|.|.|+|++|+||+..|.. |++||||++.+.. +..||+++..|
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t 68 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDIL----------GASDPYVRVTLYDPMNGVLTSVQTKTIKKS 68 (153)
T ss_dssp TTCEEEEEEEEEEESCC-----------------CCEEEEEEEEETTTEEEEEEECCCCSSC
T ss_pred CCccEEEEEEEEeeCCCCCCCC----------CCCCcEEEEEEECCCCccceeeeCccccCC
Confidence 4578999999999999999987 8999999999985 57788887665
No 12
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.51 E-value=1.1e-07 Score=71.05 Aligned_cols=45 Identities=33% Similarity=0.464 Sum_probs=39.7
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEe---cCeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMEL---DGQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l---~~Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+..|.. |.+||||++.+ ++++.||+++..|
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~~~~kT~v~~~t 87 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMG----------GTSDPYVKVFLLPDKKKKFETKVHRKT 87 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTT----------SCCCEEEEEEEETTCCSCEECCCCTTC
T ss_pred CCCEEEEEEEEeECCCCccCC----------CCcCeEEEEEEEcCCCceEeccccCCC
Confidence 368999999999999999987 89999999999 5678889887655
No 13
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=98.51 E-value=9.5e-08 Score=70.07 Aligned_cols=45 Identities=33% Similarity=0.464 Sum_probs=40.2
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEe---cCeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMEL---DGQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l---~~Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+..|.. |.+||||++.+ ++++.||+++..|
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~----------g~~dpyv~v~l~~~~~~~~kT~v~~~t 79 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMG----------GTSDPYVKVFLLPDKKKKFETKVHRKT 79 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGG----------BCCCEEEEEEEESCCSCCEECCCCCSC
T ss_pred CCCEEEEEEEEecCCCCCCCC----------CCcCcEEEEEEECCCCccEECccCcCC
Confidence 468999999999999999988 89999999999 6778889887655
No 14
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=1.3e-07 Score=68.89 Aligned_cols=44 Identities=23% Similarity=0.258 Sum_probs=39.9
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~~Kt~v~w~~ 193 (195)
..|.|.|+|++|+||+..|. |.+||||++.+++++.||+++..|
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-----------g~~dpyv~v~~~~~~~kT~v~~~t 48 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-----------GKPDPIVSVIFKDEKKKTKKVDNE 48 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-----------SCCCEEEEEECSSCEEECCCCCSC
T ss_pred CCcEEEEEEEEeeCCCCCCC-----------CCCCeEEEEEECCEeEEeeeecCC
Confidence 46999999999999999982 689999999999999999998765
No 15
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=98.50 E-value=4.9e-08 Score=69.80 Aligned_cols=44 Identities=16% Similarity=0.211 Sum_probs=38.4
Q ss_pred ceeEEEEEEeecCCCCC---CccccccccCCCCCCCCceEEEEecC---eeEEEeeeecc
Q 039195 140 DGQLFIKLEKCFNLPAM---DPWITHACSTGFLGTSDPYVVMELDG---QEIRMKCWWSW 193 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~~---D~~~~~a~~~~~gGsSDPYVVL~l~~---Q~~Kt~v~w~~ 193 (195)
.|.|.|+|++|+||+.+ |.. |++||||++.+++ ++.||+++..|
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~----------g~~dpyv~v~~~~~~~~~~kT~v~~~t 51 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDML----------DTPDPYVELFISTTPDSRKRTRHFNND 51 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHH----------CCCCEEEEEECTTSTTCCEECCCCTTC
T ss_pred CcEEEEEEEeeeCCCCCCccccC----------CCCCCEEEEEEccCCCceEEccccCCC
Confidence 48999999999999995 656 8999999999995 78899887655
No 16
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=98.50 E-value=1.3e-07 Score=71.53 Aligned_cols=45 Identities=29% Similarity=0.432 Sum_probs=40.2
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC-----eeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG-----QEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~-----Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+.+|.. |.+||||++.+.+ +..||+++..|
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~----------g~~DPyv~v~l~~~~~~~~~~kT~v~~~t 84 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDAN----------GYSDPFVKLWLKPDMGKKAKHKTQIKKKT 84 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTT----------SCCCEEEEEEEETC---CCEEECCCCCSC
T ss_pred CCCEEEEEEEEeECCCCccCC----------CCCCcEEEEEEECCCCccceEeCCcccCC
Confidence 378999999999999999987 8999999999986 67888887655
No 17
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=98.50 E-value=1.3e-07 Score=69.82 Aligned_cols=44 Identities=23% Similarity=0.265 Sum_probs=38.1
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEe-----cCeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMEL-----DGQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l-----~~Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+. |.. |.+||||++.+ +.++.||+++..|
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~----------g~~DPyv~v~l~~~~~~~~~~kT~v~~~t 66 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDG----------ADPNPYVKTYLLPDTHKTSKRKTKISRKT 66 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTS----------CCCCEEEEEEEESCSSSCCCEECCCCCSC
T ss_pred cCCEEEEEEEEeeCCCC-CCC----------CCCCeEEEEEEEcCCCCCceecCCcCcCC
Confidence 36899999999999997 766 89999999999 5678899887665
No 18
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.49 E-value=6.4e-08 Score=70.18 Aligned_cols=44 Identities=23% Similarity=0.284 Sum_probs=39.4
Q ss_pred ceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEe-----cCeeEEEeeeecc
Q 039195 140 DGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMEL-----DGQEIRMKCWWSW 193 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l-----~~Q~~Kt~v~w~~ 193 (195)
.|.|.|+|++|+||+.+|.. |.+||||++.+ +.++.||+++..|
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~~~~~~kT~~~~~t 68 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDG----------RPRNPYVKIYFLPDRSDKNKRRTKTVKKT 68 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSS----------CCCCEEEECCCSSCCSSSSCCBCCCCSSC
T ss_pred CCEEEEEEEEccCCCCcCCC----------CCCCCEEEEEEecCCCCCcceeCccccCC
Confidence 58999999999999999988 89999999999 5778899887655
No 19
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=98.48 E-value=7.3e-08 Score=74.06 Aligned_cols=65 Identities=18% Similarity=0.190 Sum_probs=44.8
Q ss_pred CCceeecCCCceEEeechhhHhhhcceeEEEEEEeecCCCCCCc-cccccccCCCCCCCCceEEEEecCe-----eEEEe
Q 039195 115 VGRKEVDVAGCKTVYLSESFAHEMYDGQLFIKLEKCFNLPAMDP-WITHACSTGFLGTSDPYVVMELDGQ-----EIRMK 188 (195)
Q Consensus 115 ~grkE~D~~G~~t~yls~sFlrE~y~G~L~V~Vvra~nLp~~D~-~~~~a~~~~~gGsSDPYVVL~l~~Q-----~~Kt~ 188 (195)
.++...+...+-.+.++-.| -.|.|.|+|++|+||+.+|. . |.+||||++.+..+ +.||+
T Consensus 8 ~~~~~~~~~~~G~l~~~l~y----~~~~L~V~v~~a~~L~~~d~~~----------g~~DPyv~v~l~~~~~~~~~~kT~ 73 (171)
T 2q3x_A 8 VGRQTLATPAMGDIQIGMED----KKGQLEVEVIRARSLTQKPGSK----------STPAPYVKVYLLENGACIAKKKTR 73 (171)
T ss_dssp EECC-----CCCEEEEEEEE----ETTEEEEEEEEEESCCCCC-------------CCCEEEEEEEEEETTEEEEEEECC
T ss_pred cccccCCCCCccEEEEEEEE----CCCEEEEEEEEeeCCCCCCcCC----------CCCCceEEEEEECCCccccceeCc
Confidence 45544444444445544444 48999999999999999996 5 89999999999753 77888
Q ss_pred eeecc
Q 039195 189 CWWSW 193 (195)
Q Consensus 189 v~w~~ 193 (195)
++..|
T Consensus 74 v~~~t 78 (171)
T 2q3x_A 74 IARKT 78 (171)
T ss_dssp CCCSC
T ss_pred cCCCC
Confidence 77655
No 20
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=98.48 E-value=1.5e-07 Score=70.51 Aligned_cols=45 Identities=29% Similarity=0.311 Sum_probs=38.7
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC-----eeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG-----QEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~-----Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+.+|.. |.+||||++.+.. ++.||+++..|
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~----------g~~dpyv~v~l~~~~~~~~~~kT~v~~~t 72 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVG----------GLSDPYVKIHLMQNGKRLKKKKTTIKKNT 72 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTT----------SCCCEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred CCCEEEEEEEEeeCCCCccCC----------CCCCeEEEEEEEeCCceeceeeCceecCC
Confidence 478999999999999999987 8999999999963 46788877654
No 21
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=98.47 E-value=1.5e-07 Score=67.82 Aligned_cols=44 Identities=32% Similarity=0.289 Sum_probs=38.1
Q ss_pred ceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC-----eeEEEeeeecc
Q 039195 140 DGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG-----QEIRMKCWWSW 193 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~-----Q~~Kt~v~w~~ 193 (195)
.|.|.|+|++|.||+..|.. |.+||||++.+.+ ++.||+++..|
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~~~~~~kT~~~~~t 63 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIG----------GTSDPYVKVWLMYKDKRVEKKKTVTKKRN 63 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTT----------TBCCEEEEEEEEETTEEEEEEECCCCSSC
T ss_pred CCeEEEEEEEeeCCCCcCCC----------CCcCeEEEEEEEeCCCccceEeCccccCC
Confidence 68999999999999999987 8999999999975 46777776554
No 22
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.47 E-value=1.7e-07 Score=69.62 Aligned_cols=44 Identities=32% Similarity=0.391 Sum_probs=39.2
Q ss_pred ceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEec-----CeeEEEeeeecc
Q 039195 140 DGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELD-----GQEIRMKCWWSW 193 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~-----~Q~~Kt~v~w~~ 193 (195)
.|.|.|+|++|+||+.+|.. |.+||||++.+. .++.||+++-.|
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~~~~~~kT~v~~~t 78 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPN----------GLSDPYVKLKLIPDPKSESKQKTKTIKCS 78 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTT----------SCCCEEEEEEEESCTTCSSCEECCCCSSC
T ss_pred CCEEEEEEEEeeCCCCCCCC----------CCcCeEEEEEEECCCCCcceEecceeCCC
Confidence 68999999999999999988 899999999997 577888886554
No 23
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=98.45 E-value=1.6e-07 Score=73.63 Aligned_cols=48 Identities=21% Similarity=0.206 Sum_probs=39.5
Q ss_pred hhcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCeeEEEeeeeccc
Q 039195 137 EMYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQEIRMKCWWSWK 194 (195)
Q Consensus 137 E~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~~Kt~v~w~~k 194 (195)
....|.|.|+|++|.||+..|.+ +.+||||++.+++++.||+++..|.
T Consensus 32 ~~~~~~L~V~V~~A~~L~~~~~~----------~~sDPYv~v~~~~~~~kT~v~~~tl 79 (173)
T 2nq3_A 32 LTMKSQLQITVISAKLKENKKNW----------FGPSPYVEVTVDGQSKKTEKCNNTN 79 (173)
T ss_dssp CSCCEEEEEEEEEEEECCCC--C----------CCCCEEEEEEETTEEEECCCCSSCS
T ss_pred cCCceEEEEEEEEeECCCCcccC----------CCCCeEEEEEECCEEeEccccCCCC
Confidence 34678999999999999965555 4599999999999999999987653
No 24
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.44 E-value=2.2e-07 Score=68.00 Aligned_cols=44 Identities=30% Similarity=0.306 Sum_probs=38.2
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC-----eeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG-----QEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~-----Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+.+|.. | +||||++.+.. ++.||+++..|
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~----------g-~dpyv~v~l~~~~~~~~~~kT~v~~~t 70 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSED----------G-SDPYVRMYLLPDKRRSGRRKTHVSKKT 70 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTT----------C-CCEEEEEEEESCCCSSSCEECCCCCSC
T ss_pred CCCEEEEEEEEeECCCCCCCC----------C-CCeeEEEEEEcCCCCCCcccCCccCCC
Confidence 368999999999999999987 7 99999999943 67888887665
No 25
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=98.43 E-value=2.3e-07 Score=68.91 Aligned_cols=45 Identities=27% Similarity=0.291 Sum_probs=32.7
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEe--cCe---eEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMEL--DGQ---EIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l--~~Q---~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+.+|.. |.+||||++.+ +++ +.||+++..|
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~----------g~~dpyv~v~~~~~~~~~~~~kT~v~~~t 77 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVS----------GLSDPYVKVNLYHAKKRISKKKTHVKKCT 77 (153)
T ss_dssp TTTEEEEEEEEEESCC----------------CCCEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred CCCEEEEEEEEeECCCCcCCC----------CCCCeEEEEEEEeCCeEeceEecCcccCC
Confidence 369999999999999999988 89999999999 443 5678877654
No 26
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.42 E-value=6e-08 Score=70.85 Aligned_cols=34 Identities=35% Similarity=0.382 Sum_probs=32.0
Q ss_pred ceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCe
Q 039195 140 DGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQ 183 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q 183 (195)
.|.|.|+|++|+||+.+|.. |.+||||++.+.++
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~----------g~~Dpyv~v~~~~~ 50 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNN----------GYSDPFVKVYLLPG 50 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSS----------SCSCCEEEEEETTS
T ss_pred CCEEEEEEEEecCCCCCCCC----------CCCCceEEEEEecC
Confidence 68999999999999999987 89999999999975
No 27
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=98.40 E-value=2.4e-07 Score=68.63 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=38.5
Q ss_pred ceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEec-----CeeEEEeeeecc
Q 039195 140 DGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELD-----GQEIRMKCWWSW 193 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~-----~Q~~Kt~v~w~~ 193 (195)
.|.|.|+|++|+||+.+|.. .|.+||||++.+. .++.||+++..|
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~---------~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t 71 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEA---------KKRSNPYVKTYLLPDKSRQGKRKTSIKRDT 71 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTT---------TTBCCEEEEEEEETCCSGGGEEECCCCSSC
T ss_pred CCEEEEEEEEecCCCCcccC---------CCCCCeEEEEEEEcCCcccCccccccCCCC
Confidence 78999999999999999953 2899999999997 457888887655
No 28
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.40 E-value=2.3e-07 Score=67.80 Aligned_cols=46 Identities=24% Similarity=0.375 Sum_probs=39.4
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEec---CeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELD---GQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~---~Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+.+|.+ +|.+||||++.+. .++.||+++..|
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~---------~~~~dpyv~v~~~~~~~~~~kT~v~~~t 68 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQ---------SMTSDPYIKMTILPEKKHKVKTRVLRKT 68 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTT---------TTBCEEEEEEEEETTTCSEEECCCCSSC
T ss_pred CCCEEEEEEEEeeCCCCCCCC---------CCCCCCEEEEEEecCCCceEecCcCcCC
Confidence 368999999999999999974 2789999999996 478899887655
No 29
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=98.38 E-value=3.4e-07 Score=68.62 Aligned_cols=45 Identities=22% Similarity=0.228 Sum_probs=38.6
Q ss_pred hcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEe-----cCeeEEEeeeecc
Q 039195 138 MYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMEL-----DGQEIRMKCWWSW 193 (195)
Q Consensus 138 ~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l-----~~Q~~Kt~v~w~~ 193 (195)
.-.|.|.|+|++|+||+..| . |.+||||++.+ ..++.||+++..|
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d-~----------g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t 73 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ-P----------GTCDPYVKISLIPEDSRLRHQKTQTVPDC 73 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS-S----------SCCCEEEEEEEESCSCCTTCEECCCCTTC
T ss_pred CCCCEEEEEEEEeeCCCCCC-C----------CCCCEEEEEEEEcCCCCccEEeccccCCC
Confidence 35799999999999999999 6 79999999999 4567888887654
No 30
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=98.37 E-value=2.1e-07 Score=71.52 Aligned_cols=45 Identities=13% Similarity=-0.043 Sum_probs=39.5
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC------eeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG------QEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~------Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+.+|.. |++||||.+.+.. ++.||+++..|
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~----------g~sDPyVkv~l~~~~~~~~~~~kT~v~~~t 91 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQ----------QDQKVNIRVAVLPCSESTTCLFRTRPLDAS 91 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCS----------CCSEEEEEEEEESCSCHHHHEEECCCEECC
T ss_pred CCCEEEEEEEEccCcCCcccC----------CCCCEEEEEEEecCCCCCccceeCCcCCCC
Confidence 368999999999999999987 8999999999975 36889888665
No 31
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=98.36 E-value=3.5e-07 Score=84.58 Aligned_cols=44 Identities=23% Similarity=0.242 Sum_probs=41.0
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~~Kt~v~w~~ 193 (195)
..|.|.|+|++|.||+. |.+ |+|||||+|.+++|+.||+|++.+
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~----------g~sDPYV~v~l~~~~~kTkvik~t 435 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYT----------TATDAYLKVFFGGQEFRTGVVWNN 435 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSC----------SCCCEEEEEEETTEEEECCCBCSC
T ss_pred cccEEEEEEEEccCCCc-ccC----------CCcCeEEEEEECCEeeeeeeecCC
Confidence 36899999999999999 988 899999999999999999998875
No 32
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=98.31 E-value=5e-07 Score=74.30 Aligned_cols=45 Identities=31% Similarity=0.463 Sum_probs=40.6
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEe---cCeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMEL---DGQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l---~~Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|.||+.+|.. |.+||||++.+ +++..||+++..|
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~----------g~~dPyv~v~l~~~~~~~~kT~v~~~t 65 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSN----------GFSDPYVKIYLLPDRKKKFQTKVHRKT 65 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTT----------SCCCEEEEEECTTSTTSCEECCCCCSC
T ss_pred CCCEEEEEEEEeECCCCcCCC----------CCcCeEEEEEEEcCCCeeEeCCccCCC
Confidence 368999999999999999987 89999999999 6788999987665
No 33
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.30 E-value=7.7e-07 Score=65.68 Aligned_cols=51 Identities=18% Similarity=0.120 Sum_probs=38.6
Q ss_pred cceeEEEEEEeecCCCCC-CccccccccCCCCCCCCceEEEEec---CeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAM-DPWITHACSTGFLGTSDPYVVMELD---GQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~-D~~~~~a~~~~~gGsSDPYVVL~l~---~Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+.. |... .....|.+||||++.+. +++.||+++..|
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g----~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t 78 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDG----SRQDMAHSNPYVKICLLPDQKNSKQTGVKRKT 78 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCC----SSCTTCCCCCEEEEEEETCCSSCEECCCCCSC
T ss_pred CCCEEEEEEEEEeCCCCcccccc----ccccCCCCCcEEEEEEEeCCCcceEeecccCC
Confidence 469999999999999994 5430 00123689999999997 567888887655
No 34
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=98.27 E-value=8.3e-07 Score=77.01 Aligned_cols=47 Identities=21% Similarity=0.311 Sum_probs=41.5
Q ss_pred hhcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCeeEEEeeeecc
Q 039195 137 EMYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQEIRMKCWWSW 193 (195)
Q Consensus 137 E~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~~Kt~v~w~~ 193 (195)
..-.|.|.|+|++|.||+..|.. |.|||||++.++++..||++++.|
T Consensus 383 ~~~~~~l~v~v~~a~~L~~~d~~----------~~sdpyv~v~~~~~~~~T~~~~~t 429 (510)
T 3jzy_A 383 TSGIGRLMVHVIEATELKACKPN----------GKSNPYCEISMGSQSYTTRTIQDT 429 (510)
T ss_dssp ---CEEEEEEEEEEESCCCCSTT----------SCCCEEEEEEETTEEEECCCCSSC
T ss_pred CCCCceEEEEeceeecCCCCCCC----------CCCCeEEEEEECCeeccCCccCCC
Confidence 34578999999999999999988 999999999999999999998765
No 35
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=98.27 E-value=7.6e-07 Score=71.61 Aligned_cols=45 Identities=33% Similarity=0.431 Sum_probs=39.4
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEec---CeeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELD---GQEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~---~Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|+||+.+|.. |.+||||++.++ +++.||+++..|
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~----------~~~dpyv~v~~~~~~~~~~~T~~~~~~ 64 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMG----------GTSDPYVKVFLLPDKKKKFETKVHRKT 64 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSS----------SSCCEEEEEEEETCTTSCEECCCCCSC
T ss_pred CCCEEEEEEEEeeCCCCCCCC----------CCCCeEEEEEEEcCCCceEeCCcccCC
Confidence 469999999999999999987 899999999996 457888887665
No 36
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=97.98 E-value=7.4e-06 Score=60.49 Aligned_cols=42 Identities=19% Similarity=0.155 Sum_probs=34.3
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEec---C-eeEEEeeeecc
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELD---G-QEIRMKCWWSW 193 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~---~-Q~~Kt~v~w~~ 193 (195)
-.|.|.|+|++|. ++|.. |.+||||++.+. + ++.||+|+..|
T Consensus 24 ~~~~L~V~v~~a~---~~d~~----------g~sDPyv~v~l~~~~~~~~~kT~v~~~t 69 (138)
T 1wfm_A 24 QKAELFVTRLEAV---TSNHD----------GGCDCYVQGSVANRTGSVEAQTALKKRQ 69 (138)
T ss_dssp TTTEEEEEEEEEE---CCCCS----------SCCCEEEEEEEEETTEEEEEECCCCCCC
T ss_pred CCCEEEEEEEEEE---cCCCC----------CCcceEEEEEEEcCCCcccEecccCcCC
Confidence 4689999999999 36777 899999999993 2 35788887665
No 37
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=97.94 E-value=9.3e-06 Score=65.26 Aligned_cols=44 Identities=30% Similarity=0.333 Sum_probs=37.2
Q ss_pred ceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC-----eeEEEeeeecc
Q 039195 140 DGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG-----QEIRMKCWWSW 193 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~-----Q~~Kt~v~w~~ 193 (195)
.|.|.|+|++|+||+.+|.. |.+||||.+.+.. ++.||+++..|
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~----------~~~dpyv~v~~~~~~~~~~~~kT~v~~~t 197 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVG----------GLSDPYVKIHLMQNGKRLKKKKTTIKKNT 197 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTT----------SCCCEEEEEEEEETTEEEEEEECCCCCSC
T ss_pred CCceEEEEEEeECCCCcCCC----------CCcCeEEEEEEEeCCcEeeeeccceecCC
Confidence 68999999999999999987 8999999999952 45677776544
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=97.92 E-value=7.4e-06 Score=67.34 Aligned_cols=44 Identities=36% Similarity=0.380 Sum_probs=38.1
Q ss_pred ceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEec--C---eeEEEeeeecc
Q 039195 140 DGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELD--G---QEIRMKCWWSW 193 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~--~---Q~~Kt~v~w~~ 193 (195)
.|.|.|+|++|+||+.+|.. |.+||||++.+. + ++.||+++..|
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~----------g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t 199 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLT----------GFSDPYVKASLISEGRRLKKRKTSIKKNT 199 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSS----------SCCCEEEEECCCTTCCTTSCEECCCCCSC
T ss_pred cceeEEEEEEeecCCccCCC----------CCCCcEEEEEEEeCCcCccceecceecCC
Confidence 69999999999999999988 899999999996 3 56788876554
No 39
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=97.87 E-value=8.1e-06 Score=60.94 Aligned_cols=39 Identities=15% Similarity=0.034 Sum_probs=31.5
Q ss_pred hcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCeeEEEeeee
Q 039195 138 MYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQEIRMKCWW 191 (195)
Q Consensus 138 ~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~~Kt~v~w 191 (195)
|..|.|.|+|++|.+|+. . |.+||||+++ .|+.||++..
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~----------g~~DPYv~v~--~~~~kt~~~~ 40 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---Q----------EKFNTYVTLK--VQNVKSTTIA 40 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---G----------GGCEEEEEEE--ETTEEEECCC
T ss_pred CcceEEEEEEEEeECCCC---C----------CCcCeEEEEE--ecCEEEeEec
Confidence 456999999999999962 4 7999999999 5666776543
No 40
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=97.66 E-value=1.6e-05 Score=76.66 Aligned_cols=50 Identities=16% Similarity=0.252 Sum_probs=41.9
Q ss_pred hHhhhcceeEEEEEEeecCCCC---CCccccccccCCCCCCCCceEEEEec---CeeEEEeeeecc
Q 039195 134 FAHEMYDGQLFIKLEKCFNLPA---MDPWITHACSTGFLGTSDPYVVMELD---GQEIRMKCWWSW 193 (195)
Q Consensus 134 FlrE~y~G~L~V~Vvra~nLp~---~D~~~~~a~~~~~gGsSDPYVVL~l~---~Q~~Kt~v~w~~ 193 (195)
++.....|.|.|+|++|+||+. +|.. |++||||+|+++ .++.||+|+..|
T Consensus 11 ~ve~~~~g~L~V~Vi~A~nL~~~~~~D~~----------g~sDPYV~V~l~~~~~~k~kTkvik~t 66 (749)
T 1cjy_A 11 IVEHQYSHKFTVVVLRATKVTKGAFGDML----------DTPDPYVELFISTTPDSRKRTRHFNND 66 (749)
T ss_dssp --CCCCCEEEEEEEEEEECCCSCHHHHHH----------CCCCEEEEEECTTSTTCCEECCCCTTC
T ss_pred cccCCCccEEEEEEEEEECCCCccccCCC----------CCcCeEEEEEEecCCCCeEecceEcCC
Confidence 3444567899999999999999 8987 899999999999 467899987655
No 41
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.52 E-value=7e-05 Score=68.81 Aligned_cols=46 Identities=33% Similarity=0.419 Sum_probs=40.5
Q ss_pred hcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEe-----cCeeEEEeeeecc
Q 039195 138 MYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMEL-----DGQEIRMKCWWSW 193 (195)
Q Consensus 138 ~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l-----~~Q~~Kt~v~w~~ 193 (195)
+-.|.|.|+|++|.||+.+|+. |.|||||.+.+ +.++.||++...|
T Consensus 169 ~~~~~L~V~v~~a~~L~~~d~~----------g~sDPyvkv~l~p~~~~~~k~kT~v~~~t 219 (674)
T 3pfq_A 169 IDREVLIVVVRDAKNLVPMDPN----------GLSDPYVKLKLIPDPKSESKQKTKTIKSS 219 (674)
T ss_dssp ECSSEEEEEEEEEESCCCCSTT----------SSCCEEEEEEEESCSSCCSCEECCCCSSC
T ss_pred eccceeeeeeecccccCCCCcc----------cccCcccccccccCccccccccccccccc
Confidence 3468999999999999999998 99999999999 6678888887655
No 42
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=97.48 E-value=0.0001 Score=68.81 Aligned_cols=48 Identities=17% Similarity=0.172 Sum_probs=39.4
Q ss_pred hcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC-----eeEEEeeeecc
Q 039195 138 MYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG-----QEIRMKCWWSW 193 (195)
Q Consensus 138 ~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~-----Q~~Kt~v~w~~ 193 (195)
...+.|.|+|++|.||+..|.. ..|.+||||++++.+ ++.||+++..+
T Consensus 494 ~~~~~L~V~Vi~A~~L~~~d~~--------~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~n 546 (624)
T 1djx_A 494 WRPERLRVRIISGQQLPKVNKN--------KNSIVDPKVIVEIHGVGRDTGSRQTAVITNN 546 (624)
T ss_dssp CCCEEEEEEEEEEESCCCCSSC--------SSSCCCEEEEEEEESSGGGCEEEECCCCTTC
T ss_pred ccceEEEEEEEEcCCCCccccc--------ccCCCCcEEEEEEecCCCCcceeecccccCC
Confidence 4578999999999999999841 128999999999955 68889887654
No 43
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=95.67 E-value=0.0087 Score=57.69 Aligned_cols=39 Identities=26% Similarity=0.205 Sum_probs=31.7
Q ss_pred hcceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC------eeEEEe-ee
Q 039195 138 MYDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG------QEIRMK-CW 190 (195)
Q Consensus 138 ~y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~------Q~~Kt~-v~ 190 (195)
+..|.|.|+|++|.+|+. +++||||.++|.+ ++.||+ ++
T Consensus 675 ~~~~~L~V~Visa~~L~~--------------~~~DPYV~V~l~g~p~d~~~k~kTk~vv 720 (799)
T 2zkm_X 675 VVATTLSITVISGQFLSE--------------RSVRTYVEVELFGLPGDPKRRYRTKLSP 720 (799)
T ss_dssp TTCEEEEEEEEEEESCCS--------------SCCCEEEEEEEECCTTSCCCCEECCCCS
T ss_pred eeeeeEEEEEEeccccCc--------------cCCCcEEEEEEEecCCCcccceeecccc
Confidence 457899999999999983 4799999999954 456777 44
No 44
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=95.63 E-value=0.0095 Score=47.75 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=32.1
Q ss_pred eEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCeeEEEeeee
Q 039195 142 QLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQEIRMKCWW 191 (195)
Q Consensus 142 ~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~~Kt~v~w 191 (195)
.|.|+|+++.||| |++|||+.+...+.+.|||+.=
T Consensus 22 sL~V~l~~a~~Lp---------------g~~Dp~akv~FRg~k~kTkvi~ 56 (144)
T 3l9b_A 22 ALIVHLKTVSELR---------------GRADRIAKVTFRGQSFYSRVLE 56 (144)
T ss_dssp EEEEEEEEEESCC---------------SCEEEEEEEEETTEEEECCCEE
T ss_pred EEEEEEEEecCCC---------------CCCCCeEEEEEeccceeeEEec
Confidence 4899999999999 5899999999999999999873
No 45
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=95.31 E-value=0.016 Score=56.35 Aligned_cols=38 Identities=24% Similarity=0.286 Sum_probs=31.6
Q ss_pred ceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC-------eeEEEeeee
Q 039195 140 DGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG-------QEIRMKCWW 191 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~-------Q~~Kt~v~w 191 (195)
.+.|.|+|+.|.||+. ..+||||.++|.+ ++.||+++-
T Consensus 649 ~~~L~V~Visaq~L~~--------------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~ 693 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD--------------KQISSYVEVEMYGLPTDTVRKKFKTKIIE 693 (816)
T ss_dssp CEEEEEEEEEEECCCS--------------SCCCEEEEEEEESSGGGCEEEEEECCCBC
T ss_pred ceEEEEEEEEcccCCC--------------CCCCCeEEEEEeCCCcccccceeeeEEec
Confidence 4789999999999973 3689999999986 677887753
No 46
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=93.97 E-value=0.034 Score=54.75 Aligned_cols=38 Identities=18% Similarity=0.175 Sum_probs=31.0
Q ss_pred eeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecC------eeEEEeeeec
Q 039195 141 GQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDG------QEIRMKCWWS 192 (195)
Q Consensus 141 G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~------Q~~Kt~v~w~ 192 (195)
-.|.|+|++|.||+. .++||||.|+|.+ ++.||+|++.
T Consensus 725 ~~L~V~Visaq~L~~--------------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~ 768 (885)
T 3ohm_B 725 NALRVKVISGQFLSD--------------RKVGIYVEVDMFGLPVDTRRKYRTRTSQG 768 (885)
T ss_dssp EEEEEEEEEEESCCS--------------SCCCEEEEEEEESSTTTCBCCCCCCCCSS
T ss_pred eEEEEEEEEeccCcc--------------cCCCcEEEEEEeCCCcccccceeeEEeeC
Confidence 379999999999984 2689999999976 3568887754
No 47
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=79.92 E-value=1.1 Score=33.64 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=19.3
Q ss_pred hcceeEEEEEEeecCCCCC------Cccccccc
Q 039195 138 MYDGQLFIKLEKCFNLPAM------DPWITHAC 164 (195)
Q Consensus 138 ~y~G~L~V~Vvra~nLp~~------D~~~~~a~ 164 (195)
.-.|.|.|+|++|+||+.+ ||.+.+.+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l 37 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTL 37 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEE
Confidence 3479999999999999875 55554443
No 48
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=50.34 E-value=49 Score=25.89 Aligned_cols=36 Identities=8% Similarity=0.001 Sum_probs=23.9
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCee
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQE 184 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~ 184 (195)
..+.|+|.+.+..-=+-+.+- -..|||+.+.+++..
T Consensus 4 m~~flRi~~~~~~~~~~~~~~----------~~lDPy~aV~vdE~~ 39 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAED----------EANQPFCAVKMKEAL 39 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSS----------SSCCCEEEEEEEEEE
T ss_pred cCccEEeeeccccccccCCcc----------ccCCceEEEEeeeeE
Confidence 356788888766532222222 479999999998765
No 49
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=48.36 E-value=46 Score=26.46 Aligned_cols=38 Identities=13% Similarity=-0.050 Sum_probs=26.0
Q ss_pred cceeEEEEEEeecCCCCCCccccccccCCCCCCCCceEEEEecCeeE
Q 039195 139 YDGQLFIKLEKCFNLPAMDPWITHACSTGFLGTSDPYVVMELDGQEI 185 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D~~~~~a~~~~~gGsSDPYVVL~l~~Q~~ 185 (195)
..+.|+|.+.+..-.+-+++- .-..|||+.+.+++...
T Consensus 8 m~~flRi~l~~~~~~~~~~~~---------~~~lDPY~aV~VdE~~~ 45 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQ---------GEAVNPYCAVLVKEYVE 45 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSC---------CCCCCCEEEEEEEEEEE
T ss_pred cCcceEEEeeccccCCCCCcc---------cccCCceEEEEeeeeee
Confidence 456788888777654444322 13789999999997743
No 50
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=27.56 E-value=11 Score=33.56 Aligned_cols=25 Identities=16% Similarity=0.154 Sum_probs=3.8
Q ss_pred cceeEEEEEEeecCCCCCC-cccccc
Q 039195 139 YDGQLFIKLEKCFNLPAMD-PWITHA 163 (195)
Q Consensus 139 y~G~L~V~Vvra~nLp~~D-~~~~~a 163 (195)
..|.|.|+|++|+||+.+| |.+++-
T Consensus 9 ~~~~L~V~VieAk~L~~~ddpYv~v~ 34 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKKRYYCELC 34 (483)
T ss_dssp EEECC---------------------
T ss_pred eccEEEEEEEEcCCcCCCCCCeEEEE
Confidence 4689999999999999874 555443
No 51
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=21.83 E-value=52 Score=25.12 Aligned_cols=24 Identities=17% Similarity=0.119 Sum_probs=18.8
Q ss_pred ceeEEEEEEeecCCCC---CCcccccc
Q 039195 140 DGQLFIKLEKCFNLPA---MDPWITHA 163 (195)
Q Consensus 140 ~G~L~V~Vvra~nLp~---~D~~~~~a 163 (195)
.|.|.|+|++|.+|+. .||.+.+-
T Consensus 13 ~~~L~V~V~~A~~l~~~g~~DPYV~v~ 39 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGAQEKFNTYVTLK 39 (167)
T ss_dssp CCEEEEEEEEEECSSCGGGCEEEEEEE
T ss_pred eEEEEEEEEEEECCCCCCCCCeEEEEE
Confidence 5799999999999964 57765443
Done!