Query 039196
Match_columns 288
No_of_seqs 202 out of 1567
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 11:59:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039196.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039196hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 1E-52 3.4E-57 383.2 22.2 223 45-267 44-273 (340)
2 2w2e_A AQY1, aquaporin, aquapo 100.0 2.8E-51 9.5E-56 368.2 21.2 219 49-268 41-269 (279)
3 3cn5_A Aquaporin; membrane pro 100.0 1.2E-51 4E-56 373.9 16.5 222 45-266 53-290 (304)
4 3llq_A Aquaporin Z 2; aquapori 100.0 4.8E-51 1.6E-55 361.7 19.0 214 49-263 26-253 (256)
5 3gd8_A Aquaporin-4; proton exc 100.0 5.2E-51 1.8E-55 356.2 18.9 215 51-265 2-223 (223)
6 1ldf_A Glycerol uptake facilit 100.0 5E-51 1.7E-55 367.9 19.4 223 49-271 4-263 (281)
7 2zz9_A Aquaporin-4; water tran 100.0 2.7E-50 9.1E-55 364.2 20.9 221 46-266 6-233 (301)
8 1j4n_A Aquaporin 1; membrane p 100.0 2.6E-50 8.9E-55 361.1 19.2 222 46-267 4-237 (271)
9 2o9g_A Aquaporin Z; integral m 100.0 7.3E-50 2.5E-54 351.4 19.2 213 52-265 4-232 (234)
10 2b6o_A Aquaporin-0, lens fiber 100.0 2.3E-49 7.8E-54 353.6 22.5 219 46-266 3-226 (263)
11 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 9.3E-50 3.2E-54 356.2 19.2 219 47-267 6-230 (266)
12 2f2b_A Aquaporin AQPM; protein 100.0 1.2E-48 4.1E-53 346.4 20.2 214 51-264 3-245 (246)
13 3c02_A Aquaglyceroporin; membr 100.0 2.4E-49 8.2E-54 352.9 13.4 221 49-269 6-248 (258)
14 2f2b_A Aquaporin AQPM; protein 99.6 7.4E-15 2.5E-19 129.6 10.9 101 49-154 140-245 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.6 4.7E-15 1.6E-19 131.9 7.6 100 167-266 8-111 (263)
16 3llq_A Aquaporin Z 2; aquapori 99.5 3.9E-14 1.3E-18 125.2 6.1 100 166-265 27-133 (256)
17 2zz9_A Aquaporin-4; water tran 99.5 9.6E-14 3.3E-18 125.3 8.4 101 166-266 10-118 (301)
18 3d9s_A Aquaporin-5, AQP-5; aqu 99.4 4.2E-14 1.5E-18 125.8 4.4 99 167-265 10-112 (266)
19 2o9g_A Aquaporin Z; integral m 99.4 1.2E-13 4.2E-18 120.8 5.9 99 168-266 4-109 (234)
20 3iyz_A Aquaporin-4; water tran 99.4 9.8E-14 3.3E-18 126.5 5.1 100 167-266 50-157 (340)
21 1j4n_A Aquaporin 1; membrane p 99.4 1.1E-13 3.9E-18 123.5 5.3 99 167-265 9-120 (271)
22 3c02_A Aquaglyceroporin; membr 99.4 1E-13 3.5E-18 123.0 4.5 100 167-266 8-113 (258)
23 3gd8_A Aquaporin-4; proton exc 99.4 2.3E-13 7.9E-18 118.2 5.7 100 167-266 2-109 (223)
24 3cn5_A Aquaporin; membrane pro 99.4 2E-13 6.8E-18 123.5 5.2 100 167-266 59-167 (304)
25 1ldf_A Glycerol uptake facilit 99.4 3.3E-13 1.1E-17 121.1 6.3 100 167-266 6-111 (281)
26 2w2e_A AQY1, aquaporin, aquapo 99.3 1.3E-11 4.5E-16 110.4 11.3 102 50-156 166-267 (279)
27 3kcu_A Probable formate transp 91.1 0.94 3.2E-05 40.1 8.9 102 86-190 68-183 (285)
28 4fc4_A Nitrite transporter NIR 88.0 0.45 1.5E-05 41.6 4.3 101 86-189 58-171 (261)
29 3tds_E Formate/nitrite transpo 71.1 1.9 6.6E-05 37.7 2.3 102 85-189 63-177 (268)
30 3kly_A Putative formate transp 66.1 41 0.0014 29.3 9.9 137 50-190 28-182 (280)
31 3s2u_A UDP-N-acetylglucosamine 35.5 3.6 0.00012 37.0 -2.3 21 105-125 9-29 (365)
32 3s2u_A UDP-N-acetylglucosamine 20.9 23 0.00078 31.6 0.3 21 219-239 12-32 (365)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=1e-52 Score=383.16 Aligned_cols=223 Identities=30% Similarity=0.429 Sum_probs=194.0
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHH
Q 039196 45 PHDIDLNPARMVIAELVGTFILMLCVCGIMASTVLT--RGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAV 122 (288)
Q Consensus 45 ~~~~~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l 122 (288)
.+...+.+||++++||+|||+|+|+++++++..... ....+++.++++||+++++++|+++++||||+|||||+++++
T Consensus 44 ~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l 123 (340)
T 3iyz_A 44 KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVC 123 (340)
T ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHH
Confidence 334457899999999999999999999998754221 223467889999999999999999999999999999999999
Q ss_pred hcCCCCCchhHHHHHHhHHHHHHHHHHHHHhcCcC--ceeec--cCCcchhHHHHHHHHHHHHHHHHHhhccccccc-CC
Q 039196 123 VGHFPLSKVPFYIMAQTAGSVLGTYIGILVYGIKS--NLMIT--RPAQHCVSAFWVELLATSIIVFLAASLACEAQC-FG 197 (288)
Q Consensus 123 ~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~--~~~~~--~p~~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~~-~~ 197 (288)
.|+++|.+++.|+++|++||++|+++++.++++.. ..+.+ .|..+..++++.|+++||+|+++++...++++. ..
T Consensus 124 ~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~ 203 (340)
T 3iyz_A 124 TRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVT 203 (340)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCcc
Confidence 99999999999999999999999999999987652 22333 344788999999999999999999988655542 24
Q ss_pred ChhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHhhcCCC
Q 039196 198 NLSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSWNFSDIWIYIIGPTIGAVAGGFVYRFLRLRPR 267 (288)
Q Consensus 198 ~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~~~~~~wvy~v~p~~Ga~la~~~~~~~~~~~~ 267 (288)
...|+.||+++.+.+..++++||++|||||+|||+++.++|.++|+||+||++|+++|+++|++++.++.
T Consensus 204 ~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 204 GSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred cchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCCh
Confidence 5689999999988888888999999999999999999999999999999999999999999999987654
No 2
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=2.8e-51 Score=368.18 Aligned_cols=219 Identities=23% Similarity=0.338 Sum_probs=191.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-------ccCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHH
Q 039196 49 DLNPARMVIAELVGTFILMLCVCGIMASTVL-------TRGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFA 121 (288)
Q Consensus 49 ~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~-------~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~ 121 (288)
-++.+|++++||+|||+|+|++++++..... .....+++.+++++|+++++++|+++++||||+|||||++++
T Consensus 41 ~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 120 (279)
T 2w2e_A 41 VRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALV 120 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHH
Confidence 3567899999999999999999886432111 111235678999999999999999999999999999999999
Q ss_pred HhcCCCCCchhHHHHHHhHHHHHHHHHHHHHhcCcCceeeccCC--cchhHHHHHHHHHHHHHHHHHhhcccccccCCCh
Q 039196 122 VVGHFPLSKVPFYIMAQTAGSVLGTYIGILVYGIKSNLMITRPA--QHCVSAFWVELLATSIIVFLAASLACEAQCFGNL 199 (288)
Q Consensus 122 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~p~--~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~~~~~~ 199 (288)
+.|+++|.+++.|+++|++|+++|+.+++.++++... ..+.|. .+..++++.|+++||+|+++++...++++..+.+
T Consensus 121 ~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~-~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~~~~ 199 (279)
T 2w2e_A 121 LARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA-FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWF 199 (279)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC-CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTTGGG
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccce-eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCc
Confidence 9999999999999999999999999999999987642 345554 6788999999999999999999887666555668
Q ss_pred hhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhcCC-CceeeeeecchHHHHHHHHHHHHhhcCCCC
Q 039196 200 SGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSWNF-SDIWIYIIGPTIGAVAGGFVYRFLRLRPRA 268 (288)
Q Consensus 200 ~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~~~-~~~wvy~v~p~~Ga~la~~~~~~~~~~~~~ 268 (288)
.|+.||+++.++++++++.||+++||||+|||+++...| .++|+||+||++|+++|+++|+++...+.+
T Consensus 200 ~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~ 269 (279)
T 2w2e_A 200 APFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQ 269 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999999999999998765 689999999999999999999999876543
No 3
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=1.2e-51 Score=373.87 Aligned_cols=222 Identities=27% Similarity=0.366 Sum_probs=191.6
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHH
Q 039196 45 PHDIDLNPARMVIAELVGTFILMLCVCGIMASTVLT---RGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFA 121 (288)
Q Consensus 45 ~~~~~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~---~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~ 121 (288)
.+..+++++|++++||+|||+|+|+++++++..... ....+++.+++++|+++++++|+++++||||+|||||++++
T Consensus 53 ~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 132 (304)
T 3cn5_A 53 GELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 132 (304)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHH
Confidence 455667899999999999999999999988764422 23356788999999999999999999999999999999999
Q ss_pred HhcCCCCCchhHHHHHHhHHHHHHHHHHHHHhcCcC---ceeec--cCCcchhHHHHHHHHHHHHHHHHHhhccccccc-
Q 039196 122 VVGHFPLSKVPFYIMAQTAGSVLGTYIGILVYGIKS---NLMIT--RPAQHCVSAFWVELLATSIIVFLAASLACEAQC- 195 (288)
Q Consensus 122 l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~--~p~~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~~- 195 (288)
+.|+++|.+++.|+++|++|+++|+.+++.++++.. ..+.+ .+..+..++++.|+++||+|+++++...++++.
T Consensus 133 l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~ 212 (304)
T 3cn5_A 133 LARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSA 212 (304)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEES
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCC
Confidence 999999999999999999999999999999987641 11112 234688999999999999999999976443432
Q ss_pred CCC----hhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHh---hcCCCceeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 196 FGN----LSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIV---SWNFSDIWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 196 ~~~----~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~---~~~~~~~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
.+. +.|+.||+++.+++++++++||+++||||+|||+++ ...|.++|+||+||++|+++|+++|++++.+.
T Consensus 213 ~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~ 290 (304)
T 3cn5_A 213 RDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAA 290 (304)
T ss_dssp TTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred CCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCC
Confidence 222 789999999999999999999999999999999999 56799999999999999999999999998754
No 4
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=4.8e-51 Score=361.66 Aligned_cols=214 Identities=29% Similarity=0.524 Sum_probs=186.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHHhcCCC
Q 039196 49 DLNPARMVIAELVGTFILMLCVCGIMASTVLT-RGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAVVGHFP 127 (288)
Q Consensus 49 ~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~ 127 (288)
.++++|++++||+|||+|+|++++++...... +...+++.++++||+++++.+|+++++||||+|||||+++++.|+++
T Consensus 26 ~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 105 (256)
T 3llq_A 26 SYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFP 105 (256)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCC
Confidence 35679999999999999999999987644332 23457889999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHhHHHHHHHHHHHHHhcCcC----------ceeeccCC-cchhHHHHHHHHHHHHHHHHHhhcccccccC
Q 039196 128 LSKVPFYIMAQTAGSVLGTYIGILVYGIKS----------NLMITRPA-QHCVSAFWVELLATSIIVFLAASLACEAQCF 196 (288)
Q Consensus 128 ~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~----------~~~~~~p~-~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~~~ 196 (288)
|.+++.|+++|++|+++|+.+++.++++.. ..+++.|. .+..++++.|+++||+|+++++.. .|++..
T Consensus 106 ~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~-~d~~~~ 184 (256)
T 3llq_A 106 ASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGS-THGRVP 184 (256)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-HSTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHh-cCCCCC
Confidence 999999999999999999999999985421 12345665 678899999999999999999886 455545
Q ss_pred CChhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhcC--CCceeeeeecchHHHHHHHHHHHHhh
Q 039196 197 GNLSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSWN--FSDIWIYIIGPTIGAVAGGFVYRFLR 263 (288)
Q Consensus 197 ~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~~--~~~~wvy~v~p~~Ga~la~~~~~~~~ 263 (288)
..+.|+.+|+++.++.++.++.||+++||||+|||+++.++ |+++|+||+||++|+++|+++|+++.
T Consensus 185 ~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 185 AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 66899999999999999999999999999999999998754 66899999999999999999999986
No 5
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-51 Score=356.19 Aligned_cols=215 Identities=30% Similarity=0.446 Sum_probs=188.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHHhcCCCC
Q 039196 51 NPARMVIAELVGTFILMLCVCGIMASTVL--TRGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAVVGHFPL 128 (288)
Q Consensus 51 ~~~r~~~~EfigT~~lvf~~~~~~~~~~~--~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 128 (288)
++||++++||+|||+|+|++++++++... .....+++.+++++|+++++.+++++++||||+|||||+++++.|+++|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 57999999999999999999998775421 1223467899999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHhHHHHHHHHHHHHHhcCc--Cc--eeeccCCcchhHHHHHHHHHHHHHHHHHhhccccccc-CCChhhHH
Q 039196 129 SKVPFYIMAQTAGSVLGTYIGILVYGIK--SN--LMITRPAQHCVSAFWVELLATSIIVFLAASLACEAQC-FGNLSGFV 203 (288)
Q Consensus 129 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~--~~~~~p~~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~~-~~~~~~~~ 203 (288)
++.+.|+++|++|+++|+.+++.+++++ .. ...+.|..+..++++.|+++||+|+++++...++++. .....|+.
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~ 161 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALA 161 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCccHH
Confidence 9999999999999999999999988754 12 2234455788999999999999999999988655543 24578999
Q ss_pred HHHHHHHHHHHhccCCCCccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHhhcC
Q 039196 204 VGVAIGLAVLITGPVSGGSMNPARSLGPAIVSWNFSDIWIYIIGPTIGAVAGGFVYRFLRLR 265 (288)
Q Consensus 204 ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~~~~~~wvy~v~p~~Ga~la~~~~~~~~~~ 265 (288)
+|+++...+..+++.||++|||||||||+++.++|+++|+||++|++|+++|+++|++++.+
T Consensus 162 iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 162 IGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 99999887878778999999999999999999999999999999999999999999998753
No 6
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=5e-51 Score=367.91 Aligned_cols=223 Identities=31% Similarity=0.491 Sum_probs=190.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHHhcCCCC
Q 039196 49 DLNPARMVIAELVGTFILMLCVCGIMASTVLTRGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAVVGHFPL 128 (288)
Q Consensus 49 ~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 128 (288)
+++++|++++||+|||+|+|+++++++.....+...+.+.+++++|+++++.+|+++++||||+|||||+++++.|+++|
T Consensus 4 ~~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 83 (281)
T 1ldf_A 4 TSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDK 83 (281)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCH
Confidence 45689999999999999999999987765544444566679999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHhHHHHHHHHHHHHHhcCcC--------------------ceeeccCC--cchhHHHHHHHHHHHHHHHHH
Q 039196 129 SKVPFYIMAQTAGSVLGTYIGILVYGIKS--------------------NLMITRPA--QHCVSAFWVELLATSIIVFLA 186 (288)
Q Consensus 129 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~--------------------~~~~~~p~--~s~~~~~~~E~~~T~~Lv~~v 186 (288)
.+++.|+++|++|+++|+.+++.++++.. ..++|.|. .+..++++.|+++||+|++++
T Consensus 84 ~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~i 163 (281)
T 1ldf_A 84 RKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLI 163 (281)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999986531 12456665 588999999999999999999
Q ss_pred hhccccccc--CCChhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-------CC------CceeeeeecchHH
Q 039196 187 ASLACEAQC--FGNLSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-------NF------SDIWIYIIGPTIG 251 (288)
Q Consensus 187 ~~~~~~~~~--~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-------~~------~~~wvy~v~p~~G 251 (288)
+...++++. .+.+.|+.||+++.++++..++.||+++||||+|||+++.. .| .++||||++|++|
T Consensus 164 l~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~G 243 (281)
T 1ldf_A 164 LALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVG 243 (281)
T ss_dssp HHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHH
T ss_pred HHHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHHH
Confidence 998654443 24689999999999999999999999999999999999861 12 2799999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCC
Q 039196 252 AVAGGFVYRFLRLRPRACSP 271 (288)
Q Consensus 252 a~la~~~~~~~~~~~~~~~~ 271 (288)
+++|+++|++++.++++++.
T Consensus 244 a~la~~~y~~l~~~~~~~~~ 263 (281)
T 1ldf_A 244 AIVGAFAYRKLIGRHLPCDI 263 (281)
T ss_dssp HHHHHHHHHHHTGGGC----
T ss_pred HHHHHHHHHHHhCccCCcch
Confidence 99999999999987766544
No 7
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=2.7e-50 Score=364.24 Aligned_cols=221 Identities=30% Similarity=0.435 Sum_probs=190.9
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHHh
Q 039196 46 HDIDLNPARMVIAELVGTFILMLCVCGIMASTVLT--RGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAVV 123 (288)
Q Consensus 46 ~~~~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~ 123 (288)
+..+.+++|++++||+|||+|+|+++++++..... ....+++.+++++|+++++++|+++++||||+|||||+++++.
T Consensus 6 ~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 85 (301)
T 2zz9_A 6 GVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCT 85 (301)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHh
Confidence 45568899999999999999999999987654422 1234677899999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHhHHHHHHHHHHHHHhcCcC--ceeecc--CCcchhHHHHHHHHHHHHHHHHHhhccccccc-CCC
Q 039196 124 GHFPLSKVPFYIMAQTAGSVLGTYIGILVYGIKS--NLMITR--PAQHCVSAFWVELLATSIIVFLAASLACEAQC-FGN 198 (288)
Q Consensus 124 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~--~~~~~~--p~~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~~-~~~ 198 (288)
|+++|.+++.|+++|++|+++|+.+++.++++.. ..+.+. +..+..++++.|+++||+|+++++...++++. ...
T Consensus 86 g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~~~ 165 (301)
T 2zz9_A 86 RKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTG 165 (301)
T ss_dssp SSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCSS
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Confidence 9999999999999999999999999999998652 122222 34678899999999999999999987655443 345
Q ss_pred hhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 199 LSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSWNFSDIWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 199 ~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~~~~~~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
+.|+.+|+++.+.++.++++||+++||||+|||+++.+.|.++|+||+||++|+++|+++|++++.++
T Consensus 166 ~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~ 233 (301)
T 2zz9_A 166 SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 233 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred hHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCc
Confidence 78999999998888888899999999999999999999999999999999999999999999997643
No 8
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=2.6e-50 Score=361.14 Aligned_cols=222 Identities=25% Similarity=0.404 Sum_probs=192.2
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------cCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHH
Q 039196 46 HDIDLNPARMVIAELVGTFILMLCVCGIMASTVLT-------RGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTI 118 (288)
Q Consensus 46 ~~~~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~-------~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTl 118 (288)
|.+++.++|++++||+||++|+|+++++++..... ....+++.+++++|+++++.+|+++++||||+|||||+
T Consensus 4 e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTl 83 (271)
T 1j4n_A 4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTL 83 (271)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHH
Confidence 34457789999999999999999999988754321 11235788999999999999999999999999999999
Q ss_pred HHHHhcCCCCCchhHHHHHHhHHHHHHHHHHHHHhcCcC----ceeeccCCcchhHHHHHHHHHHHHHHHHHhhcccccc
Q 039196 119 AFAVVGHFPLSKVPFYIMAQTAGSVLGTYIGILVYGIKS----NLMITRPAQHCVSAFWVELLATSIIVFLAASLACEAQ 194 (288)
Q Consensus 119 a~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~----~~~~~~p~~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~ 194 (288)
++++.|+++|.+++.|+++|++|+++|+.+++.++++.. ....+.|..+..++++.|+++||+|+++++...++++
T Consensus 84 a~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~ 163 (271)
T 1j4n_A 84 GLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163 (271)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSC
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 999999999999999999999999999999999986531 1223455677889999999999999999998754433
Q ss_pred c-CCChhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHhhcCCC
Q 039196 195 C-FGNLSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSWNFSDIWIYIIGPTIGAVAGGFVYRFLRLRPR 267 (288)
Q Consensus 195 ~-~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~~~~~~wvy~v~p~~Ga~la~~~~~~~~~~~~ 267 (288)
. .+.+.|+.||+++.+.++.++++||+++||||+|||+++.++|.++|+||+||++|+++|+++|++++.++.
T Consensus 164 ~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 164 RDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2 356799999999998888878899999999999999999999999999999999999999999999987654
No 9
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=7.3e-50 Score=351.44 Aligned_cols=213 Identities=30% Similarity=0.461 Sum_probs=188.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc-cCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHHhcCCCCCc
Q 039196 52 PARMVIAELVGTFILMLCVCGIMASTVLT-RGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAVVGHFPLSK 130 (288)
Q Consensus 52 ~~r~~~~EfigT~~lvf~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 130 (288)
++|++++||+|||+|+|++++++...... +...+++.+++++|+++++.+|+++++||||+|||||+++++.|+++|++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 68999999999999999999987654422 22346788999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhHHHHHHHHHHHHHhcCcC------------ceeeccCC-cchhHHHHHHHHHHHHHHHHHhhcccccccCC
Q 039196 131 VPFYIMAQTAGSVLGTYIGILVYGIKS------------NLMITRPA-QHCVSAFWVELLATSIIVFLAASLACEAQCFG 197 (288)
Q Consensus 131 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~------------~~~~~~p~-~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~~~~ 197 (288)
++.|+++|++|+++|+.+++.++++.. ..+.+.|. .+..++++.|+++|++|+++++... |++..+
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~-d~~~~~ 162 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT-DKFAPA 162 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHT-STTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhc-CCCCcc
Confidence 999999999999999999999987531 13345665 6788999999999999999999875 455456
Q ss_pred ChhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhcC--CCceeeeeecchHHHHHHHHHHHHhhcC
Q 039196 198 NLSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSWN--FSDIWIYIIGPTIGAVAGGFVYRFLRLR 265 (288)
Q Consensus 198 ~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~~--~~~~wvy~v~p~~Ga~la~~~~~~~~~~ 265 (288)
.+.|+.+|+++.++++..++.||+++||||||||+++.++ |+++|+||++|++|+++|+++|++++.+
T Consensus 163 ~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 163 GFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred chHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999999999999999865 5599999999999999999999999764
No 10
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=2.3e-49 Score=353.58 Aligned_cols=219 Identities=32% Similarity=0.436 Sum_probs=192.0
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHHhcC
Q 039196 46 HDIDLNPARMVIAELVGTFILMLCVCGIMASTVLTRGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAVVGH 125 (288)
Q Consensus 46 ~~~~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~ 125 (288)
|.++++++|++++||+|||+|+|+++++.... .+...+++.+++++|+++++.+++++++||||+|||||+++++.|+
T Consensus 3 e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~--~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~ 80 (263)
T 2b6o_A 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRW--APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQ 80 (263)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTC
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcC
Confidence 34557789999999999999999999987532 2233467789999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHhHHHHHHHHHHHHHhcCcC--ce--eeccCCcchhHHHHHHHHHHHHHHHHHhhcccccc-cCCChh
Q 039196 126 FPLSKVPFYIMAQTAGSVLGTYIGILVYGIKS--NL--MITRPAQHCVSAFWVELLATSIIVFLAASLACEAQ-CFGNLS 200 (288)
Q Consensus 126 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~--~~--~~~~p~~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~-~~~~~~ 200 (288)
++|.+++.|+++|++|+++|+.+++.++++.. .. ..+.|..+..++++.|+++||+|+++++...++++ ....+.
T Consensus 81 ~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~ 160 (263)
T 2b6o_A 81 MSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV 160 (263)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccH
Confidence 99999999999999999999999999998642 12 23345578899999999999999999998854333 335678
Q ss_pred hHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhcCCCceeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 201 GFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSWNFSDIWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 201 ~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~~~~~~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
|+.||+++.+++++++++||+++||||+|||+++.++|.++|+||+||++|+++|+++|++++.++
T Consensus 161 pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 161 ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp HHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999999999999999999999999999997654
No 11
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-50 Score=356.24 Aligned_cols=219 Identities=29% Similarity=0.430 Sum_probs=192.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHHhcCC
Q 039196 47 DIDLNPARMVIAELVGTFILMLCVCGIMASTVLTRGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAVVGHF 126 (288)
Q Consensus 47 ~~~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~ 126 (288)
..+++++|++++||+|||+|+|++++++... .....+++.+++++|+++++.+++++++||||+|||||+++++.|++
T Consensus 6 ~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~--~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~ 83 (266)
T 3d9s_A 6 VCSVAFLKAVFAEFLATLIFVFFGLGSALKW--PSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQI 83 (266)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC--SSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSS
T ss_pred hhChHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCC
Confidence 3457789999999999999999999987532 22335678899999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHhHHHHHHHHHHHHHhcCc--Cceeecc--CCcchhHHHHHHHHHHHHHHHHHhhccccccc-CCChhh
Q 039196 127 PLSKVPFYIMAQTAGSVLGTYIGILVYGIK--SNLMITR--PAQHCVSAFWVELLATSIIVFLAASLACEAQC-FGNLSG 201 (288)
Q Consensus 127 ~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~~~~~--p~~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~~-~~~~~~ 201 (288)
+|.+++.|+++|++|+++|+.+++.++++. ...+.+. +..+..++++.|+++||+|+++++...++++. ...+.|
T Consensus 84 ~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~p 163 (266)
T 3d9s_A 84 SLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPA 163 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccchHH
Confidence 999999999999999999999999998753 2233333 34678999999999999999999988543332 356789
Q ss_pred HHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhcCCCc-eeeeeecchHHHHHHHHHHHHhhcCCC
Q 039196 202 FVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSWNFSD-IWIYIIGPTIGAVAGGFVYRFLRLRPR 267 (288)
Q Consensus 202 ~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~~~~~-~wvy~v~p~~Ga~la~~~~~~~~~~~~ 267 (288)
+.||+++.+.++.++++||+++||||+|||+++.+.|.+ +|+||+||++|+++|+++|++++.++.
T Consensus 164 l~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 230 (266)
T 3d9s_A 164 LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 230 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCc
Confidence 999999999999999999999999999999999999998 999999999999999999999987543
No 12
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=1.2e-48 Score=346.42 Aligned_cols=214 Identities=32% Similarity=0.543 Sum_probs=188.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccc----------------CCcchhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 039196 51 NPARMVIAELVGTFILMLCVCGIMASTV-LTR----------------GEVGLLEYAATAGLTIIVLVYSIGPISGAHVN 113 (288)
Q Consensus 51 ~~~r~~~~EfigT~~lvf~~~~~~~~~~-~~~----------------~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~N 113 (288)
+++|++++||+|||+|+|+++++++... ..+ ...+++.+++++|+++++.+|+++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4789999999999999999999877643 111 11234569999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCCCchhHHHHHHhHHHHHHHHHHHHHhcCc----CceeeccC--CcchhHHHHHHHHHHHHHHHHHh
Q 039196 114 PAVTIAFAVVGHFPLSKVPFYIMAQTAGSVLGTYIGILVYGIK----SNLMITRP--AQHCVSAFWVELLATSIIVFLAA 187 (288)
Q Consensus 114 PavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~----~~~~~~~p--~~s~~~~~~~E~~~T~~Lv~~v~ 187 (288)
||||+++++.|+++|++.+.|+++|++|+++|+.+++.+++++ ...+.+.| ..+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999999999873 34566777 37889999999999999999999
Q ss_pred hcccccccCCChhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHh--h----cCCCceeeeeecchHHHHHHHHHHHH
Q 039196 188 SLACEAQCFGNLSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIV--S----WNFSDIWIYIIGPTIGAVAGGFVYRF 261 (288)
Q Consensus 188 ~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~--~----~~~~~~wvy~v~p~~Ga~la~~~~~~ 261 (288)
...++++....+.|+.+|+++.+++++.+++||+++||||||||+++ . .+|.++|+||++|++|+++|+++|++
T Consensus 163 ~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~ 242 (246)
T 2f2b_A 163 GIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQY 242 (246)
T ss_dssp HHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHH
Confidence 87666665567899999999999999999999999999999999993 2 35788889999999999999999999
Q ss_pred hhc
Q 039196 262 LRL 264 (288)
Q Consensus 262 ~~~ 264 (288)
++.
T Consensus 243 l~~ 245 (246)
T 2f2b_A 243 LTS 245 (246)
T ss_dssp HTC
T ss_pred HcC
Confidence 874
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=2.4e-49 Score=352.89 Aligned_cols=221 Identities=27% Similarity=0.353 Sum_probs=186.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHHhcCCCC
Q 039196 49 DLNPARMVIAELVGTFILMLCVCGIMASTVLTRGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAVVGHFPL 128 (288)
Q Consensus 49 ~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~ 128 (288)
.++++|++++||+|||+|+|++++++......+...+++.+++++|+++++.+++++++||||+|||||+++++.|+++|
T Consensus 6 ~~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 85 (258)
T 3c02_A 6 YKSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDL 85 (258)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcH
Confidence 35689999999999999999999987654433334567889999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHhHHHHHHHHHHHHHhcCcCce-------e--eccCCcchhHHHHHHHHHHHHHHHHHhhcccccc--cCC
Q 039196 129 SKVPFYIMAQTAGSVLGTYIGILVYGIKSNL-------M--ITRPAQHCVSAFWVELLATSIIVFLAASLACEAQ--CFG 197 (288)
Q Consensus 129 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~-------~--~~~p~~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~--~~~ 197 (288)
++++.|+++|++|+++|+.+++.++++.... . ......+..++++.|+++||+|+++++...++++ ...
T Consensus 86 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~ 165 (258)
T 3c02_A 86 KKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFH 165 (258)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCccc
Confidence 9999999999999999999999998754110 0 0011133456999999999999999998864443 234
Q ss_pred Chh-hHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc------CC----CceeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 198 NLS-GFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW------NF----SDIWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 198 ~~~-~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~------~~----~~~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
.+. |+.+|+++.+++++.++.||+++||||+|||+++.. .| .++|+||++|++|+++|+++|++++.++
T Consensus 166 ~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~ 245 (258)
T 3c02_A 166 ILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPL 245 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhccc
Confidence 577 999999999999999999999999999999999862 34 5699999999999999999999998766
Q ss_pred CCC
Q 039196 267 RAC 269 (288)
Q Consensus 267 ~~~ 269 (288)
+++
T Consensus 246 ~~~ 248 (258)
T 3c02_A 246 VDL 248 (258)
T ss_dssp HHH
T ss_pred CCC
Confidence 554
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.58 E-value=7.4e-15 Score=129.57 Aligned_cols=101 Identities=26% Similarity=0.371 Sum_probs=84.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHH-----h
Q 039196 49 DLNPARMVIAELVGTFILMLCVCGIMASTVLTRGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAV-----V 123 (288)
Q Consensus 49 ~~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l-----~ 123 (288)
..+.++.++.|+++||+|++++++.....+. . ....++.+|+.+....+..+++||+|+|||+|++..+ -
T Consensus 140 ~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~---~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g 214 (246)
T 2f2b_A 140 GISYWQAMLAEVVGTFLLMITIMGIAVDERA---P--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFA 214 (246)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTTSTTS---C--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHheeeEEecCCCC---C--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcC
Confidence 3567899999999999999998875432211 1 1235788999999999999999999999999999988 3
Q ss_pred cCCCCCchhHHHHHHhHHHHHHHHHHHHHhc
Q 039196 124 GHFPLSKVPFYIMAQTAGSVLGTYIGILVYG 154 (288)
Q Consensus 124 g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~ 154 (288)
++..|.+.|+||++|++|+++|+++.+.+.+
T Consensus 215 ~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 215 GTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp CCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 4567888999999999999999999887754
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.55 E-value=4.7e-15 Score=131.93 Aligned_cols=100 Identities=23% Similarity=0.281 Sum_probs=86.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhhcccccc-cCCC--hhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-CCCcee
Q 039196 167 HCVSAFWVELLATSIIVFLAASLACEAQ-CFGN--LSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-NFSDIW 242 (288)
Q Consensus 167 s~~~~~~~E~~~T~~Lv~~v~~~~~~~~-~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-~~~~~w 242 (288)
+..+.++.|+++|++|+++.+......+ .... ..++.+|+++.+.+++.+++||+|+|||++++.++.++ +|...|
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~ 87 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAI 87 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHH
Confidence 5678899999999999999888754322 1112 25688999999999999999999999999999999876 789999
Q ss_pred eeeecchHHHHHHHHHHHHhhcCC
Q 039196 243 IYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 243 vy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
+||++|++|+++|+.+++.+++++
T Consensus 88 ~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 88 CYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999999999999998754
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.46 E-value=3.9e-14 Score=125.17 Aligned_cols=100 Identities=21% Similarity=0.232 Sum_probs=83.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhcccccc--c--CCC-h-hhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-CC
Q 039196 166 QHCVSAFWVELLATSIIVFLAASLACEAQ--C--FGN-L-SGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-NF 238 (288)
Q Consensus 166 ~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~--~--~~~-~-~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-~~ 238 (288)
.+..+.++.||++|++|+++.++...... . ... + .++.+|+++++.+++.+++||+++|||++++.++.++ +|
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 106 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPA 106 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCH
Confidence 45688999999999999998877643211 1 111 2 4688999999999999999999999999999999986 79
Q ss_pred CceeeeeecchHHHHHHHHHHHHhhcC
Q 039196 239 SDIWIYIIGPTIGAVAGGFVYRFLRLR 265 (288)
Q Consensus 239 ~~~wvy~v~p~~Ga~la~~~~~~~~~~ 265 (288)
...+.|+++|++|+++|+.+.+.+++.
T Consensus 107 ~~~~~YiiAQ~lGA~~ga~lv~~~~~~ 133 (256)
T 3llq_A 107 SSLVPYVIAQVAGAIVAAAALYVIATG 133 (256)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999998853
No 17
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.46 E-value=9.6e-14 Score=125.28 Aligned_cols=101 Identities=24% Similarity=0.302 Sum_probs=85.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhcccccc-c----CCC--hhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-C
Q 039196 166 QHCVSAFWVELLATSIIVFLAASLACEAQ-C----FGN--LSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-N 237 (288)
Q Consensus 166 ~s~~~~~~~E~~~T~~Lv~~v~~~~~~~~-~----~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-~ 237 (288)
.+.++.++.||++|++|+++.++...... . ... ...+.+|+++++.+++.+++||+|+|||++++.++.++ +
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 89 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 89 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCC
Confidence 35788999999999999999887643211 0 111 25688999999999999999999999999999999986 7
Q ss_pred CCceeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 238 FSDIWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 238 ~~~~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
|.....|+++|++|+++|+.+.+.+++++
T Consensus 90 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 90 IAKSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999998754
No 18
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.44 E-value=4.2e-14 Score=125.84 Aligned_cols=99 Identities=28% Similarity=0.407 Sum_probs=85.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccccccc-CCC--hhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-CCCcee
Q 039196 167 HCVSAFWVELLATSIIVFLAASLACEAQC-FGN--LSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-NFSDIW 242 (288)
Q Consensus 167 s~~~~~~~E~~~T~~Lv~~v~~~~~~~~~-~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-~~~~~w 242 (288)
+..+.++.||++|++|+++.++....... ... ..++.+|+++++.+++.+++||+|+|||++++.++.++ +|...+
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~ 89 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAF 89 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHH
Confidence 56788999999999999998877543221 112 24689999999999999999999999999999999987 799999
Q ss_pred eeeecchHHHHHHHHHHHHhhcC
Q 039196 243 IYIIGPTIGAVAGGFVYRFLRLR 265 (288)
Q Consensus 243 vy~v~p~~Ga~la~~~~~~~~~~ 265 (288)
.|+++|++|+++|+.+.+.+++.
T Consensus 90 ~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 90 FYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999854
No 19
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.42 E-value=1.2e-13 Score=120.84 Aligned_cols=99 Identities=19% Similarity=0.247 Sum_probs=83.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccccc-c-C---CC-hhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-CCCc
Q 039196 168 CVSAFWVELLATSIIVFLAASLACEAQ-C-F---GN-LSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-NFSD 240 (288)
Q Consensus 168 ~~~~~~~E~~~T~~Lv~~v~~~~~~~~-~-~---~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-~~~~ 240 (288)
..+.++.||++|++|++..+....-++ . . +. ..++.+|+++.+.+++.+++||+|+|||++++.++.++ +|.+
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 468899999999999998776542221 1 1 11 24688999999999999999999999999999999987 7999
Q ss_pred eeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 241 IWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 241 ~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
...|+++|++|+++|+.+.+.++++.
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~ 109 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASGK 109 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999998743
No 20
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.41 E-value=9.8e-14 Score=126.49 Aligned_cols=100 Identities=23% Similarity=0.300 Sum_probs=84.0
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccccc--cc----CC-ChhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-CC
Q 039196 167 HCVSAFWVELLATSIIVFLAASLACEA--QC----FG-NLSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-NF 238 (288)
Q Consensus 167 s~~~~~~~E~~~T~~Lv~~v~~~~~~~--~~----~~-~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-~~ 238 (288)
+.++.+++||++||+|+++.++.+... .. .+ ....+.+|+++++.+++++++||+|+|||++++.++.+. +|
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 457899999999999999887764321 11 11 124688999999999999999999999999999999876 78
Q ss_pred CceeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 239 SDIWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 239 ~~~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
.....|+++|++|+++|+.+.+.+++.+
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 8999999999999999999999887654
No 21
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.41 E-value=1.1e-13 Score=123.48 Aligned_cols=99 Identities=24% Similarity=0.338 Sum_probs=83.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccccc-------ccCC----C-hhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHh
Q 039196 167 HCVSAFWVELLATSIIVFLAASLACEA-------QCFG----N-LSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIV 234 (288)
Q Consensus 167 s~~~~~~~E~~~T~~Lv~~v~~~~~~~-------~~~~----~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~ 234 (288)
+.++.++.||++|++|+++.++..... +..+ . ..++.+|+++++.+++.+++||+|+|||++++.++.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 467889999999999999877654211 1111 1 246899999999999999999999999999999998
Q ss_pred hc-CCCceeeeeecchHHHHHHHHHHHHhhcC
Q 039196 235 SW-NFSDIWIYIIGPTIGAVAGGFVYRFLRLR 265 (288)
Q Consensus 235 ~~-~~~~~wvy~v~p~~Ga~la~~~~~~~~~~ 265 (288)
++ +|.....|+++|++|+++|+.+.+.++..
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 87 78999999999999999999999998854
No 22
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.40 E-value=1e-13 Score=123.01 Aligned_cols=100 Identities=23% Similarity=0.309 Sum_probs=84.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccccc---ccCCCh--hhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-CCCc
Q 039196 167 HCVSAFWVELLATSIIVFLAASLACEA---QCFGNL--SGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-NFSD 240 (288)
Q Consensus 167 s~~~~~~~E~~~T~~Lv~~v~~~~~~~---~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-~~~~ 240 (288)
+..+.++.||++|++|+++.+...... +..... ..+.+|+++.+.+++.+++||+|+|||++++.++.++ +|.+
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 87 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKK 87 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHH
Confidence 567889999999999999876653221 111222 4678899999999999999999999999999999987 7999
Q ss_pred eeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 241 IWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 241 ~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
...|+++|++|+++|+.+.+.+++++
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 113 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHGF 113 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcchh
Confidence 99999999999999999999998754
No 23
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.39 E-value=2.3e-13 Score=118.23 Aligned_cols=100 Identities=23% Similarity=0.284 Sum_probs=83.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccccc--cc---CCC--hhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-CC
Q 039196 167 HCVSAFWVELLATSIIVFLAASLACEA--QC---FGN--LSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-NF 238 (288)
Q Consensus 167 s~~~~~~~E~~~T~~Lv~~v~~~~~~~--~~---~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-~~ 238 (288)
..+|.++.||++|++|++..++..... +. ... ...+.+|+++.+.+++.+++||+|+|||.+++.++.++ +|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 357899999999999999887765321 11 111 24678999999999999999999999999999999886 78
Q ss_pred CceeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 239 SDIWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 239 ~~~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
.+...|+++|++|+++|+.+.+.+++++
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~ 109 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPPS 109 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 8999999999999999999999887643
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.39 E-value=2e-13 Score=123.47 Aligned_cols=100 Identities=21% Similarity=0.290 Sum_probs=84.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhhcccccc------cCCC--hhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-C
Q 039196 167 HCVSAFWVELLATSIIVFLAASLACEAQ------CFGN--LSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-N 237 (288)
Q Consensus 167 s~~~~~~~E~~~T~~Lv~~v~~~~~~~~------~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-~ 237 (288)
+.++.++.||++|++|+++.++...... .... ..++.+|+++++.+++++++||+|+|||++++.++.++ +
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 5678999999999999998876543211 1111 24688999999999999999999999999999999886 7
Q ss_pred CCceeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 238 FSDIWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 238 ~~~~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
|.....|+++|++|+++|+.+.+.+++++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 88999999999999999999999988653
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.38 E-value=3.3e-13 Score=121.14 Aligned_cols=100 Identities=19% Similarity=0.341 Sum_probs=84.1
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccccc---c-cCCC-hhhHHHHHHHHHHHHHhccCCCCccchhhhHHHHHhhc-CCCc
Q 039196 167 HCVSAFWVELLATSIIVFLAASLACEA---Q-CFGN-LSGFVVGVAIGLAVLITGPVSGGSMNPARSLGPAIVSW-NFSD 240 (288)
Q Consensus 167 s~~~~~~~E~~~T~~Lv~~v~~~~~~~---~-~~~~-~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~~g~al~~~-~~~~ 240 (288)
+..+.++.||++|++|+++.++..... + ..+. ..++.+|+++.+.+++.+++||+|+|||++++.++.++ +|..
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 567889999999999999877653221 1 1112 25788999999999999999999999999999999987 7999
Q ss_pred eeeeeecchHHHHHHHHHHHHhhcCC
Q 039196 241 IWIYIIGPTIGAVAGGFVYRFLRLRP 266 (288)
Q Consensus 241 ~wvy~v~p~~Ga~la~~~~~~~~~~~ 266 (288)
...|+++|++|+++|+.+.+.+++++
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~~ 111 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYNL 111 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999888643
No 26
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.29 E-value=1.3e-11 Score=110.43 Aligned_cols=102 Identities=20% Similarity=0.127 Sum_probs=84.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCcchhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHHhcCCCCC
Q 039196 50 LNPARMVIAELVGTFILMLCVCGIMASTVLTRGEVGLLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAVVGHFPLS 129 (288)
Q Consensus 50 ~~~~r~~~~EfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 129 (288)
.+..+.++.|+++||+|+++.++...... . .....++.+|+.+....+..++.||+.+|||++++..+....-+.
T Consensus 166 ~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~---~--~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~ 240 (279)
T 2w2e_A 166 ASRTRGLFLEAFGTAILCLTVLMLAVEKH---R--ATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPN 240 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSCS---T--TGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCC---C--CcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchh
Confidence 45788999999999999999886542211 1 112356789999999999999999999999999999998865456
Q ss_pred chhHHHHHHhHHHHHHHHHHHHHhcCc
Q 039196 130 KVPFYIMAQTAGSVLGTYIGILVYGIK 156 (288)
Q Consensus 130 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~ 156 (288)
.+|+||++|++|+++|+++.+.+...+
T Consensus 241 ~~WVy~vgPiiGa~la~~ly~~l~~~~ 267 (279)
T 2w2e_A 241 YHWIYWLGPILGAFLAYSIWQMWKWLN 267 (279)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 799999999999999999999887554
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=91.07 E-value=0.94 Score=40.05 Aligned_cols=102 Identities=11% Similarity=0.103 Sum_probs=56.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccCCCCChHHHHHHHHhcCCCCCchhHHHHHHhHHHHHHHHHHHHHhcCcCce------
Q 039196 86 LLEYAATAGLTIIVLVYSIGPISGAHVNPAVTIAFAVVGHFPLSKVPFYIMAQTAGSVLGTYIGILVYGIKSNL------ 159 (288)
Q Consensus 86 ~~~~~l~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~------ 159 (288)
.+..++.+.+++...+..-+..-=+ |--.+ ...+.++.+|.+.+--|.-=.+|=++|+++.-.+.......
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg--n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS--TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT--THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc--chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchH
Confidence 3455667777777776665553222 42233 34567888877766555544555555554444332111000
Q ss_pred --------eeccCCcchhHHHHHHHHHHHHHHHHHhhcc
Q 039196 160 --------MITRPAQHCVSAFWVELLATSIIVFLAASLA 190 (288)
Q Consensus 160 --------~~~~p~~s~~~~~~~E~~~T~~Lv~~v~~~~ 190 (288)
....-..+..+.|+-=.++-++.++.+....
T Consensus 145 ~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~ 183 (285)
T 3kcu_A 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSY 183 (285)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011124567778888888888888877653
No 28
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=88.02 E-value=0.45 Score=41.59 Aligned_cols=101 Identities=12% Similarity=0.150 Sum_probs=54.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhc-ccCCCCChHHHHHHHHhcCCCCCchhHHHHHHhHHHHHHHHHHHHHhcCcCce-eecc
Q 039196 86 LLEYAATAGLTIIVLVYSIGP-ISGAHVNPAVTIAFAVVGHFPLSKVPFYIMAQTAGSVLGTYIGILVYGIKSNL-MITR 163 (288)
Q Consensus 86 ~~~~~l~~g~~~~~~i~~~~~-iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~-~~~~ 163 (288)
.+..++.+.+++...+..-+. .+| |-.......+.++.+|.+.+--|.-=.+|=++|+++.-.+....... ....
T Consensus 58 ~ll~g~~F~vGl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~ 134 (261)
T 4fc4_A 58 PLVMGATFGIALTLVIIAGSELFTG---HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVD 134 (261)
T ss_dssp HHHHHHHTTHHHHHHHHTCCCCHHH---HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCT
T ss_pred HHHHHHHHHHHHHHHHHcCCccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchH
Confidence 345566666666655544332 122 44433345567889988877766555556665555544433221000 0000
Q ss_pred C-----------CcchhHHHHHHHHHHHHHHHHHhhc
Q 039196 164 P-----------AQHCVSAFWVELLATSIIVFLAASL 189 (288)
Q Consensus 164 p-----------~~s~~~~~~~E~~~T~~Lv~~v~~~ 189 (288)
. ..+..+.|+-=.++-++.++.+...
T Consensus 135 ~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 171 (261)
T 4fc4_A 135 TSIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMA 171 (261)
T ss_dssp TSHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0245666777777788877777665
No 29
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=71.14 E-value=1.9 Score=37.69 Aligned_cols=102 Identities=8% Similarity=0.100 Sum_probs=57.9
Q ss_pred chhHHHHHHHHHHHHHHHHhhcc-cCCCCChHHHHHHHHhcCCCCCchhHHHHHHhHHHHHHHHHHHHHhcCcCce--ee
Q 039196 85 GLLEYAATAGLTIIVLVYSIGPI-SGAHVNPAVTIAFAVVGHFPLSKVPFYIMAQTAGSVLGTYIGILVYGIKSNL--MI 161 (288)
Q Consensus 85 ~~~~~~l~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~--~~ 161 (288)
..+..++.+.+++...+..-+.. +| |-.......+.++.+|.+.+--|.-=.+|=++|+++.-.+....... ..
T Consensus 63 ~~ll~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~ 139 (268)
T 3tds_E 63 TKIVMGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGP 139 (268)
T ss_dssp HHHHHHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSH
T ss_pred HHHHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcH
Confidence 34455666666666665543332 22 43333345678899988887666666666666666555444221111 00
Q ss_pred ----------ccCCcchhHHHHHHHHHHHHHHHHHhhc
Q 039196 162 ----------TRPAQHCVSAFWVELLATSIIVFLAASL 189 (288)
Q Consensus 162 ----------~~p~~s~~~~~~~E~~~T~~Lv~~v~~~ 189 (288)
..-..+..+.|+-=.++-++.++.+...
T Consensus 140 ~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 177 (268)
T 3tds_E 140 VAEFFANTAASKASMPFTALFFRGILCNILVCVSVLCS 177 (268)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001356677777788888888877764
No 30
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=66.07 E-value=41 Score=29.29 Aligned_cols=137 Identities=10% Similarity=0.091 Sum_probs=73.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccCCcc--hhHHHHHHHHHHHHHHHHhhc-ccCCCCChHHHHHHHHhcC
Q 039196 50 LNPARMVIAELVGTFILMLCVCGIMASTV-LTRGEVG--LLEYAATAGLTIIVLVYSIGP-ISGAHVNPAVTIAFAVVGH 125 (288)
Q Consensus 50 ~~~~r~~~~EfigT~~lvf~~~~~~~~~~-~~~~~~~--~~~~~l~~g~~~~~~i~~~~~-iSGah~NPavTla~~l~g~ 125 (288)
++..|.++.-+++-+.+-+.......... ..+.+.+ .+..++.+.+++...+..-+. .+|-.+ .+ ...+.++
T Consensus 28 ~~~~~~~~~~~~AG~~I~~g~~~~~~v~~~~~~~~~g~~~ll~g~~F~vGL~lVvl~g~ELFTgn~l---~~-~~~~~~~ 103 (280)
T 3kly_A 28 KAAYKSFLLAISAGIQIGIAFVFYTVVTTGAHDMPYGVTKLLGGLAFSLGLILVVITGGELFTSSVL---IL-VAKASGK 103 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHTCCCTTTTCC---CC-SSSSSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHccccccccchH---HH-HHHHcCC
Confidence 44455555555555544443322221111 1111112 345567777777777766555 444333 22 2345788
Q ss_pred CCCCchhHHHHHHhHHHHHHHHHHHHHhcCcCce--------------eeccCCcchhHHHHHHHHHHHHHHHHHhhcc
Q 039196 126 FPLSKVPFYIMAQTAGSVLGTYIGILVYGIKSNL--------------MITRPAQHCVSAFWVELLATSIIVFLAASLA 190 (288)
Q Consensus 126 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~--------------~~~~p~~s~~~~~~~E~~~T~~Lv~~v~~~~ 190 (288)
.+|.+.+--|.-=.+|=++|+++.-.+....... ....-..+..+.|+-=.++-++.++.+....
T Consensus 104 is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~ 182 (280)
T 3kly_A 104 ISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTF 182 (280)
T ss_dssp CCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999988777666666666666555443111000 0011124567778888888888888887653
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=35.52 E-value=3.6 Score=37.02 Aligned_cols=21 Identities=29% Similarity=0.311 Sum_probs=17.6
Q ss_pred hcccCCCCChHHHHHHHHhcC
Q 039196 105 GPISGAHVNPAVTIAFAVVGH 125 (288)
Q Consensus 105 ~~iSGah~NPavTla~~l~g~ 125 (288)
+.=||||++||++++-.+..+
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 445789999999999998765
No 32
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=20.86 E-value=23 Score=31.55 Aligned_cols=21 Identities=19% Similarity=0.408 Sum_probs=17.5
Q ss_pred CCCccchhhhHHHHHhhcCCC
Q 039196 219 SGGSMNPARSLGPAIVSWNFS 239 (288)
Q Consensus 219 sG~~lNPA~~~g~al~~~~~~ 239 (288)
||+|++||.+++-.+...++.
T Consensus 12 TgGHi~palala~~L~~~g~~ 32 (365)
T 3s2u_A 12 TGGHVFPALACAREFQARGYA 32 (365)
T ss_dssp SHHHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHhCCCE
Confidence 889999999999999765443
Done!