BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039200
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis
thaliana GN=P1 PE=1 SV=1
Length = 345
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/73 (49%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
Query: 9 SNKRVILSNYVTGFPNESDMKITSGSIKLKVADGSKDTVLLKNLYLSCGPYMRERMSKLD 68
+NK+VIL +YV+GFP ESD T+ +++L+V +G+ ++VL+KNLYLSC PYMR RM K D
Sbjct: 4 TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGT-NSVLVKNLYLSCDPYMRIRMGKPD 62
Query: 69 --RPSFVDSFHPG 79
+ ++ PG
Sbjct: 63 PSTAALAQAYTPG 75
>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis
thaliana GN=P2 PE=2 SV=2
Length = 343
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
Query: 9 SNKRVILSNYVTGFPNESDMKITSGSIKLKVADGSKDTVLLKNLYLSCGPYMRERMSKLD 68
+NK+VI ++V+GFP ESD T+ +++L+V +GSK +VL+KNLYLSC PYMR RM K D
Sbjct: 3 TNKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSK-SVLVKNLYLSCDPYMRSRMGKPD 61
Query: 69 RPS-FVDSFHPG----GVSSSRPI 87
S ++ PG G SR I
Sbjct: 62 PSSALAQAYAPGKPIYGYGVSRVI 85
>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1
Length = 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 8 VSNKRVILSNYVTGFPNESDMKITSGSIKLKVADGSKDTVLLKNLYLSCGPYMRERMSKL 67
V NK+++L+NY+ G +SD+ + + +I +++ DG +L+KNLYLS PY+ RM KL
Sbjct: 2 VMNKQIVLNNYINGSLKQSDLALRTSTICMEIPDGCNGAILVKNLYLSVNPYLILRMGKL 61
Query: 68 DRPSFVDSFHPGGVSSSRPIS 88
D P F DS PG S +S
Sbjct: 62 DIPQF-DSILPGSTIVSYGVS 81
>sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain
K12) GN=curA PE=1 SV=3
Length = 345
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 5 QEAVSNKRVILSNYVTGFPNESDMKITSGSIKLKVADGSKDTVLLKNLYLSCGPYMRERM 64
Q+ N+R +L++ G P + ++ VA + VLL+ +YLS PYMR RM
Sbjct: 3 QQKQRNRRWVLASRPHGAPVPENFRLEEDD----VATPGEGQVLLRTVYLSLDPYMRGRM 58
Query: 65 SKLDRPSFVDSFHPGGV 81
S D PS+ GGV
Sbjct: 59 S--DEPSYSPPVDIGGV 73
>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis
(strain 168) GN=yfmJ PE=2 SV=1
Length = 339
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 9 SNKRVILSNYVTGFPNESDMKITSGSIKLKVADGSKDTVLLKNLYLSCGPYMRERMSKLD 68
S +++ L+ G P D + + + V + + VL+K LY+S PYMR RM D
Sbjct: 4 SQQQIQLARRPQGIPVHEDFRFET----IPVPEPKQGEVLVKTLYVSVDPYMRGRMQ--D 57
Query: 69 RPSFVDSF 76
S+V+ F
Sbjct: 58 TKSYVEPF 65
>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPB24D3.08c PE=3 SV=1
Length = 349
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 8 VSNKRVILSNYV---TGFPNESD-MKITSGSIKLKVADGSKDT-VLLKNLYLSCGPYMRE 62
VSN VI+ Y+ G+P + + L+ A ++T VLLKN+Y S PY+R
Sbjct: 2 VSNNAVIIKKYLDSTAGYPVIGEHLAFEKREFDLENAQVDEETPVLLKNIYTSVDPYLRM 61
Query: 63 RMSKLDRPSFVDSFHPG 79
RM S++ G
Sbjct: 62 RMQSPKHASYIPPLELG 78
>sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1
Length = 329
Score = 32.3 bits (72), Expect = 0.94, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 8 VSNKRVILSNYVTGFPNESDMKITSGSIKLKVADGSKDTVLLKNLYLSCGPYMR 61
V K L + G+P SD ++ + + + DG VLL+ LYL+ PYMR
Sbjct: 2 VHAKSWTLKKHFVGYPTNSDFELKTVELP-PLKDGE---VLLEALYLTVDPYMR 51
>sp|Q14914|PTGR1_HUMAN Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2
Length = 329
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 8 VSNKRVILSNYVTGFPNESDMKITSGSIKLKVADGSKDTVLLKNLYLSCGPYMRERMSKL 67
V K L + G+P SD ++ + + + +G VLL+ L+L+ PYMR +L
Sbjct: 2 VRTKTWTLKKHFVGYPTNSDFELKTAELP-PLKNGE---VLLEALFLTVDPYMRVAAKRL 57
>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3
Length = 329
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 8 VSNKRVILSNYVTGFPNESDMKITSGSIKLKVADGSKDTVLLKNLYLSCGPYMRERMSKL 67
V K L + GFP +S+ ++ + + + +G VLL+ L+LS PYMR KL
Sbjct: 2 VQAKTWTLKKHFEGFPTDSNFELRTTELP-PLNNGE---VLLEALFLSVDPYMRVAAKKL 57
>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2
Length = 329
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 8 VSNKRVILSNYVTGFPNESDMKITSGSIKLKVADG---SKDTVLLKNLYLSCGPYMRERM 64
V K L + GFP T G+ +LK + + VLL+ L+LS PYMR
Sbjct: 2 VQAKSWTLKKHFEGFP-------TDGNFELKTTELPPLNNGEVLLEALFLSVDPYMRVAA 54
Query: 65 SKL 67
KL
Sbjct: 55 KKL 57
>sp|A1JKX1|MDTA_YERE8 Multidrug resistance protein MdtA OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=mdtA PE=3
SV=1
Length = 443
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 9 SNKRVILSNYVTGFPNESDMKITSGSIKLKVADGSKDTVLLKNLYLS 55
+NK+++ Y+ N+ D T+G+IKLK ++D VL N +++
Sbjct: 272 TNKQMLAQGYLLSIDNQIDT--TTGTIKLKARFANEDDVLFPNQFVN 316
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,749,514
Number of Sequences: 539616
Number of extensions: 1067131
Number of successful extensions: 1756
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1748
Number of HSP's gapped (non-prelim): 19
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)