BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039203
(125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94CG2|BET12_ARATH Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4
Length = 130
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 107/125 (85%), Gaps = 2/125 (1%)
Query: 1 MSYRREHRASKGALFDEYDGLEEGGLKASSSYSSGIDEHDNDKAIDGLKERAVFLKRLTG 60
M++RRE+RAS+ +LFD DGLEEG L+ASSSY+ DE DND+A++ L++R FLKR+TG
Sbjct: 1 MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAH--DERDNDEALENLQDRVSFLKRVTG 58
Query: 61 DIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFKMVFEKKSNRRICTLVGSFVVSFFVL 120
DIHEEVE+HNRLLD++GN MD++RGIMSGT++RFK+VFEKKSNR+ C L+ FV+ F ++
Sbjct: 59 DIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIM 118
Query: 121 YYLIR 125
YYLIR
Sbjct: 119 YYLIR 123
>sp|Q9M2J9|BET11_ARATH Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1
Length = 122
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 103/125 (82%), Gaps = 3/125 (2%)
Query: 1 MSYRREHRASKGALFDEYDGLEEGGLKASSSYSSGIDEHDNDKAIDGLKERAVFLKRLTG 60
M+ RRE R + +LFD G+EEGG++A+SSYS I+EH+N++A++GL++R + LKRL+G
Sbjct: 1 MNPRREPRGGRSSLFD---GIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSG 57
Query: 61 DIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFKMVFEKKSNRRICTLVGSFVVSFFVL 120
DI+EEV++HNR+LDRMGN MD+SRG +SGTMDRFK VFE KS+RR+ TLV SFV F V+
Sbjct: 58 DINEEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVI 117
Query: 121 YYLIR 125
YYL R
Sbjct: 118 YYLTR 122
>sp|Q62896|BET1_RAT BET1 homolog OS=Rattus norvegicus GN=Bet1 PE=1 SV=1
Length = 118
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 19 DGLEEGGLKASSSYSSGID--EHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRM 76
DG GG +SG + E +ND+ + L+ + +K L+ +I EV++ N+LL M
Sbjct: 8 DGAPPGGYGNYGYANSGYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNKLLAEM 67
Query: 77 GNSMDASRGIMSGTMDRFKMVFEKKSNRRICTLVGSFVVSFFVLYYLIR 125
+ D++ G + TM R K++ + +C ++ + FFV+Y++I+
Sbjct: 68 DSQFDSTTGFLGKTMGRLKILSRGSQTKLLCYMMLFSLFVFFVIYWIIK 116
>sp|O35623|BET1_MOUSE BET1 homolog OS=Mus musculus GN=Bet1 PE=3 SV=1
Length = 118
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 51/88 (57%)
Query: 38 EHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFKMV 97
E +ND+ + L+ + +K L+ +I EV++ N+LL M + D++ G + TM R K++
Sbjct: 29 EEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNKLLAEMDSQFDSTTGFLGKTMGRLKIL 88
Query: 98 FEKKSNRRICTLVGSFVVSFFVLYYLIR 125
+ +C ++ + FFV+Y++I+
Sbjct: 89 SRGSQTKLLCYMMLFSLFVFFVIYWIIK 116
>sp|O15155|BET1_HUMAN BET1 homolog OS=Homo sapiens GN=BET1 PE=1 SV=1
Length = 118
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 28 ASSSYSSGIDEHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIM 87
A+S YS+ E +N++ + L+ + +K L+ +I EV++ N+LL M + D++ G +
Sbjct: 21 ANSGYSA--CEEENERLTESLRSKVTAIKSLSIEIGHEVKTQNKLLAEMDSQFDSTTGFL 78
Query: 88 SGTMDRFKMVFEKKSNRRICTLVGSFVVSFFVLYYLIR 125
TM + K++ + +C ++ + FF++Y++I+
Sbjct: 79 GKTMGKLKILSRGSQTKLLCYMMLFSLFVFFIIYWIIK 116
>sp|Q68EL3|BET1L_DANRE BET1-like protein OS=Danio rerio GN=bet1l PE=3 SV=1
Length = 110
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 38 EHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRF-KM 96
+ +N + + L + LK L DI ++ E N LD M ++ ++ G+++G++ RF M
Sbjct: 17 DAENKRMAENLASKVSRLKSLAYDIDKDAEEQNAYLDGMDSNFLSATGLLTGSVKRFSTM 76
Query: 97 VFEKKSNRRI-CTLVGSFVVSFFVLYYLI 124
V + NR+I C + VV+FF+LYYL+
Sbjct: 77 VRSGRDNRKILCYVSVGLVVAFFLLYYLV 105
>sp|O35153|BET1L_MOUSE BET1-like protein OS=Mus musculus GN=Bet1l PE=3 SV=1
Length = 111
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 29 SSSYSSGIDEHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMS 88
SS I + +N + D L + LK L DI + E NR LD M + + G+++
Sbjct: 9 SSGAVEDILDRENKRMADSLASKVTRLKSLALDIDRDTEDQNRYLDGMDSDFTSVTGLLT 68
Query: 89 GTMDRF-KMVFEKKSNRR-ICTLVGSFVVSFFVLYYLI 124
G++ RF M + NR+ +C + +V+FF+L YL+
Sbjct: 69 GSVKRFSTMARSGRDNRKLLCGMAVVLIVAFFILSYLL 106
>sp|Q3MHP8|BET1L_BOVIN BET1-like protein OS=Bos taurus GN=BET1L PE=3 SV=1
Length = 111
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 36 IDEHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRF- 94
I + +N + D L + LK L DI + E NR LD M + + G+++G++ RF
Sbjct: 16 ILDRENKRMADSLASKVTRLKSLALDIDRDAEDQNRYLDGMDSDFTSMTGLLTGSVKRFS 75
Query: 95 KMVFEKKSNRR-ICTLVGSFVVSFFVLYYLI 124
M + NR+ +C + +V+FF+L YL+
Sbjct: 76 TMARSGRDNRKLLCGVAVGLIVAFFILSYLL 106
>sp|Q5RBX2|BET1L_PONAB BET1-like protein OS=Pongo abelii GN=BET1L PE=3 SV=1
Length = 111
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 36 IDEHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRF- 94
I + +N + D L + LK L DI ++ E NR LD M + + G+++G++ RF
Sbjct: 16 ILDRENKRMADNLASKVTRLKSLALDIDKDAEDQNRYLDGMDSDFTSMTGLLTGSVKRFS 75
Query: 95 KMVFEKKSNRR-ICTLVGSFVVSFFVLYYLI 124
M + NR+ +C + +V+FF+L Y +
Sbjct: 76 TMARSGRDNRKLLCGMAVGLIVAFFILSYFL 106
>sp|O35152|BET1L_RAT BET1-like protein OS=Rattus norvegicus GN=Bet1l PE=1 SV=1
Length = 111
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 36 IDEHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFK 95
I + +N + D L + LK L DI + E NR LD M + + G+++G++ RF
Sbjct: 16 IVDRENKRMADSLASKVTRLKSLALDIDRDTEDQNRYLDGMDSDFTSVTGLLTGSVKRFS 75
Query: 96 MVFEKKSNRR--ICTLVGSFVVSFFVLYYL 123
V + R +C + +V+FF+L YL
Sbjct: 76 TVARSGRDTRKLLCGMAVVLIVAFFILSYL 105
>sp|Q9NYM9|BET1L_HUMAN BET1-like protein OS=Homo sapiens GN=BET1L PE=1 SV=1
Length = 111
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 36 IDEHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRF- 94
I + +N + D L + LK L DI + E NR LD M + + +++G++ RF
Sbjct: 16 ILDRENKRMADSLASKVTRLKSLALDIDRDAEDQNRYLDGMDSDFTSMTSLLTGSVKRFS 75
Query: 95 KMVFEKKSNRR-ICTLVGSFVVSFFVLYYLI 124
M + NR+ +C + +V+FF+L Y +
Sbjct: 76 TMARSGQDNRKLLCGMAVGLIVAFFILSYFL 106
>sp|Q946Y7|SYP61_ARATH Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1
Length = 245
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 56/120 (46%)
Query: 5 REHRASKGALFDEYDGLEEGGLKASSSYSSGIDEHDNDKAIDGLKERAVFLKRLTGDIHE 64
R + + + +D+Y G ++ G S S + D+ +D L + + + IH+
Sbjct: 123 RMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHD 182
Query: 65 EVESHNRLLDRMGNSMDASRGIMSGTMDRFKMVFEKKSNRRICTLVGSFVVSFFVLYYLI 124
E+ + R++D + MD+++ + + MV +K + ++ +V F +L+ L+
Sbjct: 183 ELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILFVLV 242
>sp|Q09730|SFT1_SCHPO Protein transport protein sft1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sft1 PE=3 SV=1
Length = 91
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 40 DNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFKMVFE 99
N++ ++ L + LK +T DI+ + R+ DR S + + + F V
Sbjct: 4 QNERRLETLSGQVSSLKNVTYDIYSRANDYTRI-DRATESFSGLSNSVKKSTENFFRVVR 62
Query: 100 KKSNRRICTLVGSFVVSFFVLYY 122
RRI T+V + V S ++YY
Sbjct: 63 SAGRRRIMTMVLAIVGSILIIYY 85
>sp|P43682|SFT1_YEAST Protein transport protein SFT1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SFT1 PE=1 SV=1
Length = 97
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 38 EHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFKMV 97
E +ND+ ++GL + + + +I + S + ++++M +S+ + + + R +
Sbjct: 10 ESNNDRKLEGLANKLATFRNINQEIGDRAVSDSSVINQMTDSLGSMFTDIKNSSSR--LT 67
Query: 98 FEKKSNRRICTLVGSFVVSFFVLYYLIR 125
K+ I +VG ++ FF+LY L +
Sbjct: 68 RSLKAGNSIWRMVGLALLIFFILYTLFK 95
>sp|B6YST9|SYL_THEON Leucine--tRNA ligase OS=Thermococcus onnurineus (strain NA1)
GN=leuS PE=3 SV=1
Length = 967
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 10 SKGALFDEYDGLEEGGLKASSSYSSGIDEHDNDKAIDGLKERAVFLKRLTGDIHEEVESH 69
SKG + + D +EE G Y G+ EHD+D D + ++ G + ++VE
Sbjct: 654 SKGNVLNFIDAIEENGADVVRLYIMGLAEHDSD--FD-------WRRKEVGKLRKQVERF 704
Query: 70 NRLLDRMGNSMDASRGIMSGTMDRFKM 96
L+ S +A G+ +DR+ +
Sbjct: 705 YELVSEFA-SYEAKEGVELKDIDRWML 730
>sp|O60499|STX10_HUMAN Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1
Length = 249
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 19 DGLEEGGLKASSSYSSGIDEH---------DNDKAIDGLKERAVFLKRLTGDIHEEVESH 69
D L+ + A+S Y I+E + D+ ++ + LK ++G + EE++
Sbjct: 135 DLLDASAVSATSRY---IEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQ 191
Query: 70 NRLLDRMGNSMDASRGIMSGTMDRFKMVFEKKSNRR-ICTL 109
+LD MD ++ M G + + V S+RR C +
Sbjct: 192 GIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAI 232
>sp|Q70EL4|UBP43_HUMAN Ubiquitin carboxyl-terminal hydrolase 43 OS=Homo sapiens GN=USP43
PE=1 SV=2
Length = 1123
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Query: 77 GNSMDASRGI------MSGTMDRFKMVFEKKSNRR 105
GNS D+ RG + GT+ + VF KK NRR
Sbjct: 976 GNSKDSRRGTSELDRPLQGTLTLLRSVFRKKENRR 1010
>sp|Q59E55|NAB_DROME NGFI-A-binding protein homolog OS=Drosophila melanogaster GN=nab
PE=1 SV=3
Length = 625
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 3 YRREHRASKGALFDEYDGLEEGGLKASSSYSSGIDEHDNDKAIDGLKERAVFLKRLTGDI 62
YR RAS A +D LE GG Y +G +E A+ G+ + + ++RL +
Sbjct: 122 YRVLQRASLLAYYDTL--LEMGGDDVQQLYDAGEEEFLEIMALVGMASKPLHVRRLQKAL 179
Query: 63 HE 64
HE
Sbjct: 180 HE 181
>sp|Q8NKR7|SYL_PYRKO Leucine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=leuS PE=3 SV=2
Length = 967
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 10 SKGALFDEYDGLEEGGLKASSSYSSGIDEHDNDKAIDGLKERAVFLKRLTGDIHEEVESH 69
SKG + + D +EE G Y G+ EHD+D D + ++ G + ++VE
Sbjct: 654 SKGNVLNFIDAIEENGADVVRLYIMGLAEHDSD--FD-------WRRKEVGKLRKQVERF 704
Query: 70 NRLLDRMGNSMDASRGIMSGTMDRFKM 96
L+ + +A G+ +DR+ +
Sbjct: 705 YELVSEFA-TYEAKEGVELKDIDRWML 730
>sp|Q96EY4|TMA16_HUMAN Translation machinery-associated protein 16 OS=Homo sapiens
GN=TMA16 PE=1 SV=2
Length = 203
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 54 FLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFKMVFE 99
+L R + ++ E++E HN + DR G + ++ TM+R + FE
Sbjct: 81 YLNRFSSEL-EQIELHNSIRDRQGRRHCSRETVIKQTMERERQQFE 125
>sp|O65649|FPP5_ARATH Filament-like plant protein 5 OS=Arabidopsis thaliana GN=FPP5 PE=2
SV=2
Length = 996
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 38 EHDNDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFKMV 97
E D ++ K V+L R T ++ EE+++ L N + SR + + T+ + K++
Sbjct: 342 EISTDHKLEECKRENVYLTRRTLEMEEEIQTLKEHLSARNNELQVSRNVCAKTLGKLKIL 401
>sp|P23733|PP11_TRYBB Serine/threonine-protein phosphatase PP1(4.8) OS=Trypanosoma brucei
brucei PE=3 SV=2
Length = 346
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 57 RLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFKMVFEKKSNRRICTLVG---SF 113
R+ GD+H + RL D G DA+ + +DR +S RIC L+ SF
Sbjct: 98 RICGDVHGQYTDLLRLFDLGGFPPDANYIFLGDYVDR-----GDQSLERICLLLAYKLSF 152
Query: 114 VVSFFVL 120
+FF+L
Sbjct: 153 PETFFLL 159
>sp|Q9SF29|SYP71_ARATH Syntaxin-71 OS=Arabidopsis thaliana GN=SYP71 PE=1 SV=1
Length = 266
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 41 NDKAIDGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFK-MVFE 99
++ +D + E LK + D++EE++ L+D + +D + + T R K V +
Sbjct: 178 QEQGLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQ 237
Query: 100 KKSNRRICTLVGSFVVSFFVLYYL 123
+S+R C + + + YL
Sbjct: 238 LRSSRNFCIDIVLLCIVLGIAAYL 261
>sp|A3LU10|MSH3_PICST DNA mismatch repair protein MSH3 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=MSH3 PE=3 SV=3
Length = 1025
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 48 LKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIM 87
++ER + ++ LTGD + V++ LD+MG S+D +M
Sbjct: 466 IEERLLAIEDLTGDFNNVVDALKIQLDKMGKSLDLEELLM 505
>sp|Q5HNN1|HEM1_STAEQ Glutamyl-tRNA reductase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=hemA PE=3 SV=1
Length = 448
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 47 GLKERAVFLKRLTGDIHEEVESHNRLLDRMG 77
L+ER + + + G I EE++SHN ++ +G
Sbjct: 310 NLRERQLAAETIAGQIPEEIDSHNEWVNMLG 340
>sp|Q72K16|PAAK_THET2 Phenylacetate-coenzyme A ligase OS=Thermus thermophilus (strain
HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C0602 PE=1 SV=1
Length = 445
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 55 LKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSGTMDRFKMVFEKKSNRRICTLVGSFV 114
LKRL ++E V + RLLD G RG+ D ++ F KK++ R G F
Sbjct: 23 LKRLVAYVYERVPFYRRLLDEAGVDPKGFRGL----EDLPRIPFTKKTDLRDHYPFGLFA 78
Query: 115 V 115
V
Sbjct: 79 V 79
>sp|Q551H4|FRAY2_DICDI Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum
GN=fray2 PE=3 SV=1
Length = 1028
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 31 SYSSGIDEHDNDKAI-DGLKERAVFLKRLTGDIHEEVESHNRLLDRMGNSMDASRGIMSG 89
S+ G +EH + + LK F K TG IH +++S N L+D GN + G+ +
Sbjct: 162 SFPQGFEEHVIATILKEALKAICYFHK--TGRIHRDIKSGNILIDSNGNIQLSDFGVSAT 219
Query: 90 TMD 92
+D
Sbjct: 220 LID 222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,508,226
Number of Sequences: 539616
Number of extensions: 1704337
Number of successful extensions: 4723
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 4687
Number of HSP's gapped (non-prelim): 51
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)