Query 039205
Match_columns 158
No_of_seqs 130 out of 680
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 12:10:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039205.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039205hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f6o_A Metacaspase-1; rossmann 100.0 1.1E-36 3.9E-41 259.4 11.0 134 4-156 104-327 (350)
2 4af8_A Metacaspase MCA2; hydro 100.0 1E-33 3.4E-38 242.5 14.0 141 4-157 144-333 (367)
3 3bij_A Uncharacterized protein 99.9 3.3E-27 1.1E-31 195.2 10.1 128 7-155 53-251 (285)
4 3uoa_B Mucosa-associated lymph 99.7 5.8E-16 2E-20 133.5 11.2 112 8-156 48-200 (390)
5 1f1j_A Caspase-7 protease; cas 98.3 3.3E-06 1.1E-10 70.4 10.5 122 8-156 115-272 (305)
6 2j32_A Caspase-3; Pro-caspase3 98.3 2.3E-06 7.7E-11 69.2 9.1 118 8-157 62-217 (250)
7 3sir_A Caspase; hydrolase; 2.6 98.3 5E-06 1.7E-10 67.6 10.2 123 8-156 65-223 (259)
8 1m72_A Caspase-1; caspase, cys 98.3 5E-06 1.7E-10 68.1 10.1 122 7-156 76-233 (272)
9 4ehd_A Caspase-3; caspase, apo 98.2 9.5E-06 3.3E-10 66.7 10.9 119 8-156 90-244 (277)
10 2nn3_C Caspase-1; cysteine pro 98.2 7E-06 2.4E-10 68.6 9.4 121 8-156 105-261 (310)
11 3h11_B Caspase-8; cell death, 98.1 3.3E-05 1.1E-09 63.1 11.3 129 8-157 70-236 (271)
12 3e4c_A Caspase-1; zymogen, inf 98.0 2.8E-05 9.5E-10 64.6 9.7 129 8-157 103-277 (302)
13 1nw9_B Caspase 9, apoptosis-re 98.0 7.7E-05 2.6E-09 60.9 11.1 57 80-156 196-253 (277)
14 3od5_A Caspase-6; caspase doma 97.9 7.2E-05 2.5E-09 61.3 10.6 129 8-157 67-235 (278)
15 2fp3_A Caspase NC; apoptosis, 97.8 0.00012 4.1E-09 61.1 10.2 131 7-157 104-285 (316)
16 3h11_A CAsp8 and FADD-like apo 97.1 0.0018 6.2E-08 52.9 8.6 130 8-157 75-244 (272)
17 2h54_A Caspase-1; allosteric s 96.3 0.0032 1.1E-07 48.4 4.0 33 8-40 86-120 (178)
18 1pyo_A Caspase-2; apoptosis, c 90.6 0.24 8.2E-06 37.5 3.9 34 7-40 78-113 (167)
19 2dko_A Caspase-3; low barrier 88.2 0.36 1.2E-05 35.6 3.3 33 8-40 62-95 (146)
20 1qtn_A Caspase-8; apoptosis, d 87.0 0.58 2E-05 35.1 3.8 34 7-40 75-109 (164)
21 2ql9_B Caspase-7; cysteine pro 82.9 4.7 0.00016 27.3 6.7 56 81-156 8-64 (97)
22 2ql9_A Caspase-7; cysteine pro 82.4 0.94 3.2E-05 34.4 3.2 33 8-40 90-123 (173)
23 2dko_B Caspase-3; low barrier 82.0 5.2 0.00018 27.5 6.7 57 80-156 13-70 (103)
24 2xzd_B Caspase-3; hydrolase-pr 81.4 5.3 0.00018 28.3 6.7 57 80-156 12-69 (118)
25 1sc3_B Interleukin-1 beta conv 80.1 8 0.00027 25.8 6.9 56 81-156 6-62 (88)
26 1pyo_B Caspase-2; apoptosis, c 77.9 8 0.00027 26.6 6.6 57 80-156 11-68 (105)
27 1qtn_B Caspase-8; apoptosis, d 77.6 5.5 0.00019 26.9 5.5 57 81-157 10-68 (95)
28 3rjm_B Caspase-2; caspase-2, c 68.6 21 0.00071 25.1 7.0 57 80-156 12-69 (117)
29 3p45_A Caspase-6; protease, hu 63.3 6.1 0.00021 30.1 3.4 33 8-40 90-123 (179)
30 2hd9_A UPF0310 protein PH1033; 61.3 5.8 0.0002 29.0 2.9 18 20-37 30-47 (145)
31 2gbs_A Hypothetical protein RP 59.2 6.8 0.00023 29.0 2.9 19 19-37 37-55 (145)
32 3sma_A FRBF; N-acetyl transfer 59.1 9.7 0.00033 31.1 4.2 30 5-36 18-47 (286)
33 1zce_A Hypothetical protein AT 58.5 7.1 0.00024 29.2 3.0 19 19-37 38-56 (155)
34 2ar1_A Hypothetical protein; s 57.3 7.5 0.00026 29.6 3.0 20 19-38 53-72 (172)
35 2eve_A Hypothetical protein ps 56.1 8.1 0.00028 29.0 3.0 19 19-37 35-53 (157)
36 3ijw_A Aminoglycoside N3-acety 53.2 13 0.00045 30.0 4.0 28 7-36 13-40 (268)
37 2p5d_A UPF0310 protein mjecl36 51.3 8.9 0.0003 28.0 2.5 15 20-34 33-47 (147)
38 2nyg_A YOKD protein; PFAM02522 49.6 16 0.00055 29.4 4.0 27 8-36 12-38 (273)
39 3eop_A Thymocyte nuclear prote 49.0 12 0.00042 28.5 3.0 18 20-37 47-64 (176)
40 2l6n_A Uncharacterized protein 42.3 13 0.00046 26.7 2.2 35 120-154 82-116 (132)
41 2lxr_A NADH dehydrogenase I su 42.1 17 0.00057 24.0 2.4 29 8-36 7-36 (76)
42 3pkz_A Recombinase SIN; small 40.3 15 0.00052 25.3 2.2 19 16-34 44-62 (124)
43 2k1g_A Lipoprotein SPR; soluti 39.0 11 0.00038 27.1 1.3 13 23-35 66-78 (135)
44 1x3l_A Hypothetical protein PH 38.8 26 0.00088 30.3 3.8 36 8-43 100-137 (440)
45 2wtz_A UDP-N-acetylmuramoyl-L- 38.7 19 0.00065 31.2 3.0 28 13-40 480-507 (535)
46 1cvr_A Gingipain R, RGPB; casp 36.9 22 0.00076 30.4 3.1 24 9-40 190-213 (435)
47 2b8n_A Glycerate kinase, putat 36.4 27 0.00094 30.1 3.6 36 8-43 104-141 (429)
48 2gm5_A Transposon gamma-delta 35.1 20 0.00069 25.3 2.2 20 15-34 44-63 (139)
49 1xho_A Chorismate mutase; sout 33.9 35 0.0012 25.2 3.3 43 9-53 44-92 (148)
50 3kw0_A Cysteine peptidase; str 32.7 22 0.00076 27.3 2.2 22 17-40 32-53 (214)
51 2pbc_A FK506-binding protein 2 31.7 22 0.00075 23.4 1.8 24 24-47 5-30 (102)
52 1dbf_A Protein (chorismate mut 31.5 40 0.0014 24.3 3.2 43 9-53 15-63 (127)
53 1gdt_A GD resolvase, protein ( 30.9 25 0.00086 25.6 2.2 19 16-34 46-64 (183)
54 3epz_A DNA (cytosine-5)-methyl 30.8 33 0.0011 27.8 2.9 29 127-155 175-203 (268)
55 4dot_A Group XVI phospholipase 30.3 24 0.00083 25.7 1.9 14 23-36 6-19 (140)
56 1ufy_A Chorismate mutase; shik 28.9 57 0.002 23.3 3.7 42 9-52 14-62 (122)
57 2jyx_A Lipoprotein SPR; soluti 28.9 19 0.00065 25.5 1.1 14 23-36 66-79 (136)
58 2r0q_C Putative transposon TN5 28.7 28 0.00097 26.0 2.2 21 15-35 43-63 (209)
59 1yel_A AT1G16640; CESG, protei 28.7 36 0.0012 22.8 2.5 29 16-44 67-100 (104)
60 3gt2_A Putative uncharacterize 28.2 26 0.0009 25.0 1.8 12 23-34 88-99 (142)
61 4dpz_X HRAS-like suppressor 2; 28.0 25 0.00086 25.5 1.7 14 23-36 6-19 (137)
62 3pbi_A Invasion protein; pepti 25.9 38 0.0013 26.2 2.4 11 23-33 157-167 (214)
63 3ne0_A Resuscitation promoting 25.4 39 0.0013 26.2 2.4 11 23-33 157-167 (214)
64 1pqs_A Cell division control p 25.2 34 0.0012 22.3 1.8 18 139-156 9-26 (77)
65 1e8c_A UDP-N-acetylmuramoylala 25.1 44 0.0015 28.4 3.0 28 13-40 442-469 (498)
66 2vn1_A 70 kDa peptidylprolyl i 24.8 38 0.0013 23.3 2.1 23 24-46 33-58 (129)
67 2l6p_A PHAC1, PHAC2 and PHAD g 24.3 20 0.00068 25.4 0.5 34 120-153 75-108 (124)
68 1wgn_A UBAP1, ubiquitin associ 23.5 17 0.00057 23.2 -0.0 21 8-28 41-61 (63)
69 2ppn_A FK506-binding protein 1 23.1 42 0.0014 22.0 2.0 14 25-38 16-29 (107)
70 4dip_A Peptidyl-prolyl CIS-tra 23.1 38 0.0013 23.1 1.8 23 24-46 28-53 (125)
71 1t11_A Trigger factor, TF; hel 22.9 59 0.002 27.1 3.3 31 8-38 134-174 (392)
72 4b4t_W RPN10, 26S proteasome r 22.3 1.1E+02 0.0038 24.3 4.7 36 5-40 19-59 (268)
73 3kz7_A FK506-binding protein 3 21.9 45 0.0015 22.4 2.0 24 25-48 20-45 (119)
74 2z1c_A Hydrogenase expression/ 21.6 31 0.0011 22.4 1.0 15 21-35 32-46 (75)
75 2lkn_A AH receptor-interacting 21.2 40 0.0014 25.0 1.7 23 25-47 27-53 (165)
76 1hxv_A Trigger factor; FKBP fo 21.2 37 0.0013 23.2 1.4 23 24-46 29-52 (113)
77 2awg_A 38 kDa FK-506 binding p 21.1 43 0.0015 22.6 1.7 22 24-45 29-52 (118)
78 1f56_A Plantacyanin; cupredoxi 21.1 41 0.0014 22.3 1.5 27 24-50 18-51 (91)
79 3uj3_X DNA-invertase; helix-tu 21.0 28 0.00095 25.6 0.7 19 17-35 44-62 (193)
80 1yat_A FK506 binding protein; 20.7 50 0.0017 22.0 2.0 23 25-47 22-46 (113)
81 4dol_A AT1G53520, 94270-95700, 20.5 83 0.0028 23.9 3.4 28 11-38 132-161 (217)
82 1q1o_A Cell division control p 20.3 76 0.0026 21.7 2.8 18 139-156 30-47 (98)
83 4ici_A Putative flavoprotein; 20.2 40 0.0014 24.4 1.5 13 28-40 14-26 (171)
84 3nyi_A FAT acid-binding protei 20.2 96 0.0033 24.8 3.9 33 6-40 65-97 (297)
No 1
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=259.39 Aligned_cols=134 Identities=37% Similarity=0.655 Sum_probs=98.2
Q ss_pred CCCCcchHHHHHHHHHHHHhhCCCCCEEEEEeccCCC-------------------------------------------
Q 039205 4 DPLKWPTKYNMRMALCWLMQGCQPGDSLVFHFSGHAS------------------------------------------- 40 (158)
Q Consensus 4 ~~~~~aTr~nI~~al~~L~~~a~~gD~v~f~fSGHG~------------------------------------------- 40 (158)
++...|||+||+++|+||+++++|||+|||||||||.
T Consensus 104 ~~~~~pTr~nI~~aL~~L~~~a~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I~ddeL~~~L~~~l~~ 183 (350)
T 4f6o_A 104 DLVRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPLQQ 183 (350)
T ss_dssp CGGGSCCHHHHHHHHHHHHTTCCTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCEEHHHHHHHHTTTCCT
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCcccHHHHHHHHHhhcCC
Confidence 4556799999999999999999999999999999998
Q ss_pred -----cccccCCCCCcCCcchhhccCccccc----cccccCC--------------------CCCCcc------------
Q 039205 41 -----CIIDACHSGTMLDLPFLCRMDRRGRY----IWEDHRP--------------------RSGTWK------------ 79 (158)
Q Consensus 41 -----~i~DcCHSG~~~r~p~~~~~~~~g~~----~~~~~~~--------------------~~g~~~------------ 79 (158)
+||||||||+++|+||.++.+ |.+ .|++... ..+++|
T Consensus 184 g~~vt~IlD~ChSGt~ldlp~~~~~~--g~~~e~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (350)
T 4f6o_A 184 GVRLTALFDSCHSGTVLDLPYTYSTK--GIIKEPNIWKDVGQDGLQAAISYATGNRAALIGSLGSIFKTVKGGMGNNVDR 261 (350)
T ss_dssp TCEEEEEECSSSCTTTTCCSEEEETT--EEEECCCC--------------------------------------------
T ss_pred CCeEEEEEccCCCCcccccccccccc--cccCcchhhhhccccccchhhhhccccchhhcccchhhhhhhccccccccch
Confidence 899999999999999988752 221 1322100 001111
Q ss_pred ------cCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 039205 80 ------GASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSFIQASELGHGTTYGRMLTSMRS 153 (158)
Q Consensus 80 ------~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~all~~L~~~~~~s~~~l~~~vr~ 153 (158)
..+++++|+||||+|+|+|+|+. ++|..+|||||+|+++|+++|++||.+|++.||+
T Consensus 262 ~~~~~~~~~~~~vi~~SgCkD~QtSaD~~-----------------~~g~~~GAmTyafi~aL~~~p~~tY~~Ll~~~r~ 324 (350)
T 4f6o_A 262 ERVRQIKFSAADVVMLSGSKDNQTSADAV-----------------EDGQNTGAMSHAFIKVMTLQPQQSYLSLLQNMRK 324 (350)
T ss_dssp -------CCCSEEEEEEEEC------------------------------CCCHHHHHHHHHHHHCCCCBHHHHHHHHHH
T ss_pred hhhhhccCCCCCEEEEEecCCCCchhhhc-----------------cCCceeehhHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 35678999999999999999998 6688999999999999999999999999999999
Q ss_pred HHh
Q 039205 154 TIY 156 (158)
Q Consensus 154 ~v~ 156 (158)
.|+
T Consensus 325 ~L~ 327 (350)
T 4f6o_A 325 ELA 327 (350)
T ss_dssp HHT
T ss_pred HHH
Confidence 987
No 2
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=100.00 E-value=1e-33 Score=242.48 Aligned_cols=141 Identities=30% Similarity=0.508 Sum_probs=109.4
Q ss_pred CCCCcchHHHHHHHHHHHHhhCCCCCEEEEEeccCCC-------------------------------------------
Q 039205 4 DPLKWPTKYNMRMALCWLMQGCQPGDSLVFHFSGHAS------------------------------------------- 40 (158)
Q Consensus 4 ~~~~~aTr~nI~~al~~L~~~a~~gD~v~f~fSGHG~------------------------------------------- 40 (158)
+...+|||+||+++|+||+++++|||++||||||||.
T Consensus 144 ~~~~~pTr~nI~~aL~~L~~~a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~ddeL~~lLv~~l~~g 223 (367)
T 4af8_A 144 GRTDQPTRDNIVRYMAWLVKDAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVDDDIHKLLFSRLPEK 223 (367)
T ss_dssp TCCBCCCHHHHHHHHHHHHHTCCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEHHHHHHHHTTTCCTT
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccHHHHHHHHHHhccCC
Confidence 3456999999999999999999999999999999998
Q ss_pred ----cccccCCCCCcCCcchhhccCc--cccccccccCCCCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHH
Q 039205 41 ----CIIDACHSGTMLDLPFLCRMDR--RGRYIWEDHRPRSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLML 114 (158)
Q Consensus 41 ----~i~DcCHSG~~~r~p~~~~~~~--~g~~~~~~~~~~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~ 114 (158)
+||||||||+++++||.++... .+...+...+.+.+ ...++++|+||||+++|+|+|+..... |+
T Consensus 224 ~~v~vIlD~ChSGt~~dlp~~~~~r~~~~~~~~~~~~~~~~~---~~~~~~vi~~Sac~d~QtSad~~~~~~---f~--- 294 (367)
T 4af8_A 224 VRLTAVFDCGHSGSIMDLPFTYVCSGGEQASGTPHMKRIREG---NDVLGDVMMISGCADEQTSADVKNTAT---FG--- 294 (367)
T ss_dssp CEEEEEEECTTCCCCTTCSEEEECCTTCCTTSCCCCEECSSC---CCCCSEEEEEEEECCCSCCCCCC------------
T ss_pred CEEEEEEeCCCCCcccccccccccccccccccchhhhhhccC---CCCCCCEEEEEecCCCCchhhhhcccc---cc---
Confidence 8999999999999998655321 11111111111111 245778999999999999999872111 11
Q ss_pred HHhhccCCCccchHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc
Q 039205 115 YERALSNIPSIGAITYSFIQASELGHGTTYGRMLTSMRSTIYH 157 (158)
Q Consensus 115 ~~~~~~~g~~~GafT~all~~L~~~~~~s~~~l~~~vr~~v~~ 157 (158)
. +++..+|+|||+|+++|++++++||.+|+++||+.|++
T Consensus 295 -~---g~~~~~GafTyali~~L~~~~~~Ty~~Ll~~vr~~l~~ 333 (367)
T 4af8_A 295 -T---GSTGAGGAATQCITCMLMNNQSLSYGKLLIETRDMLKR 333 (367)
T ss_dssp -----CCCBCBSHHHHHHHHHHHCCSCCBHHHHHHHHHHHHHH
T ss_pred -c---cccCcccHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 0 13578999999999999999999999999999999985
No 3
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=99.94 E-value=3.3e-27 Score=195.17 Aligned_cols=128 Identities=23% Similarity=0.319 Sum_probs=95.9
Q ss_pred CcchHHHHHHHHHHHHhhCCCCCEEEEEeccCCC-------------------------------------------ccc
Q 039205 7 KWPTKYNMRMALCWLMQGCQPGDSLVFHFSGHAS-------------------------------------------CII 43 (158)
Q Consensus 7 ~~aTr~nI~~al~~L~~~a~~gD~v~f~fSGHG~-------------------------------------------~i~ 43 (158)
.+||++||+++|+||+++++|||+++|||||||. +|+
T Consensus 53 ~~~t~~~i~~al~~l~~~~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~~i~~~~l~~~l~~l~~~~~~~vil 132 (285)
T 3bij_A 53 KAATRAKVIDAIGKAAKALGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDGELIDDELYALLGKFAAGVRVLVFS 132 (285)
T ss_dssp GGCCHHHHHHHHHHHHHHCCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSSEEEHHHHHHHHTTSCSSCEEEEEE
T ss_pred CccCHHHHHHHHHHHHHhCCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCCCccHHHHHHHHHhccCCCeEEEEE
Confidence 4699999999999999999999999999999995 999
Q ss_pred ccCCCCCcCC-cchhhccCcc------cc--cccccc----------C-------C-CCCCcccCCCCCeEEEEecCCCc
Q 039205 44 DACHSGTMLD-LPFLCRMDRR------GR--YIWEDH----------R-------P-RSGTWKGASGGEAISFSSCDDNQ 96 (158)
Q Consensus 44 DcCHSG~~~r-~p~~~~~~~~------g~--~~~~~~----------~-------~-~~g~~~~~~~~~~i~lsAc~~~q 96 (158)
||||||++.+ +||....... |. .++... . . .........++++++|+||+++|
T Consensus 133 D~C~SG~~~~~~p~~~~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~lsa~~~~q 212 (285)
T 3bij_A 133 DSCHSGTVVKMAYYNGTTAARSAGPDEGEIRYRAMPQSVAMRTYRANREFYDTIQQKTKKVDLADVKASILLISGCQDNQ 212 (285)
T ss_dssp ECCCCCCHHHHHHTTC-------------CEESBCCHHHHHHHHHHTHHHHHHHHHHCCCCCTTTCSSEEEEEESSCTTS
T ss_pred ecCCCCccccccccccccccccccccccccceeecCchhhhhhhhcchhHHHHHhhhcccccccCCCCCEEEEEeCCCCc
Confidence 9999999998 6763321000 00 000000 0 0 00000123467899999999999
Q ss_pred cccccccchhHHHHHHHHHHhhccCCCccchHHHHHHHHHhcCC-CCCHHHHHHHHHHHH
Q 039205 97 TSADTSSLTDIELFNLMLYERALSNIPSIGAITYSFIQASELGH-GTTYGRMLTSMRSTI 155 (158)
Q Consensus 97 ~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~all~~L~~~~-~~s~~~l~~~vr~~v 155 (158)
+|+|.. .+|+|||+|+++|+... .+||.+|+++|++.+
T Consensus 213 ~A~e~~---------------------~~G~FT~aLl~~L~~~~~~~s~~~l~~~v~~~~ 251 (285)
T 3bij_A 213 LSQDGA---------------------FNGAFTGQLLRVWKNGLYKGSYRSFHKAIVRRM 251 (285)
T ss_dssp CCEECS---------------------SSCHHHHHHHHHHGGGTCCSCHHHHHHHHHHHS
T ss_pred cccccc---------------------cCCHHHHHHHHHHhhCCCCcCHHHHHHHHHHhc
Confidence 999854 58999999999999744 699999999999865
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=99.65 E-value=5.8e-16 Score=133.45 Aligned_cols=112 Identities=12% Similarity=0.022 Sum_probs=91.5
Q ss_pred cchHHHHHHHHHHHHhhCCCCCEEEEEeccCCC-----------------------------------------cccccC
Q 039205 8 WPTKYNMRMALCWLMQGCQPGDSLVFHFSGHAS-----------------------------------------CIIDAC 46 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~a~~gD~v~f~fSGHG~-----------------------------------------~i~DcC 46 (158)
.+|+++|.++|+++.++++++|.++|||||||. +|+|||
T Consensus 48 DlT~~eI~~aL~~f~~~~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~~~~K~kL~ILDAC 127 (390)
T 3uoa_B 48 DLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQEKETGLNVFLLDMC 127 (390)
T ss_dssp SCCHHHHHHHHHHHHHTCCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHHTTCSEEEEEEESC
T ss_pred cCCHHHHHHHHHHHHhhCCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHHhcCCCceEEEEECC
Confidence 489999999999999999999999999999996 899999
Q ss_pred CCCCcCCcchhhccCccccccccccCCCCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccc
Q 039205 47 HSGTMLDLPFLCRMDRRGRYIWEDHRPRSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIG 126 (158)
Q Consensus 47 HSG~~~r~p~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~G 126 (158)
+|+...+.. . . +..+...+++.+++.||.+++.|+|.. .++..+|
T Consensus 128 rg~~~~~~~----~--~------------~~~~ip~~ad~Li~yAT~pG~~A~r~~-----------------~d~~~gS 172 (390)
T 3uoa_B 128 RKRNDYDDT----I--P------------ILDALKVTANIVFGYATCQGAEAFEIQ-----------------HSGLANG 172 (390)
T ss_dssp CCCCTTCCC----C--C------------CCCCCCCCSCEEEEESSCTTCCCEECS-----------------SCTTCCC
T ss_pred CCCCccccc----c--c------------ccccCcccCCcEEEEEcCCCcEeeecC-----------------CCCCCCC
Confidence 996443210 0 0 011123467889999999999999865 2346799
Q ss_pred hHHHHHHHHHhcCCCCCHHHHHHHHHHHHh
Q 039205 127 AITYSFIQASELGHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 127 afT~all~~L~~~~~~s~~~l~~~vr~~v~ 156 (158)
.||++|+++|++ ..+..+|+.+|+..|.
T Consensus 173 ~FtqaL~e~L~~--~~dl~~LLt~Vn~~Va 200 (390)
T 3uoa_B 173 IFMKFLKDRLLE--DKKITVLLDEVAEDMG 200 (390)
T ss_dssp HHHHHHTTTTTC--SSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcc--CCCHHHHHHHHHHHHh
Confidence 999999999998 6999999999999985
No 5
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=98.33 E-value=3.3e-06 Score=70.40 Aligned_cols=122 Identities=13% Similarity=0.011 Sum_probs=82.4
Q ss_pred cchHHHHHHHHHHHHhhC-CCCCEEEEEeccCCC----------------------------------cccccCCCCCcC
Q 039205 8 WPTKYNMRMALCWLMQGC-QPGDSLVFHFSGHAS----------------------------------CIIDACHSGTML 52 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~a-~~gD~v~f~fSGHG~----------------------------------~i~DcCHSG~~~ 52 (158)
..|++.|.++|+.+.+.. +..|.++|+|.|||. +|+|+|-.....
T Consensus 115 dlt~~em~~~l~~~~~~~h~~~d~~vv~ilsHG~~~~i~g~D~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~ 194 (305)
T 1f1j_A 115 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENVIYGKDGVTPIKDLTAHFRGDRSKTLLEKPKLFFIQACRGTELD 194 (305)
T ss_dssp SCCHHHHHHHHHHHHHSCGGGEEEEEEEEESCEETTEEECSSSEEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCB
T ss_pred CcCHHHHHHHHHHHHHhhcCCCCEEEEEEecCCCCCeEEecCCeEEHHHHHHHhhhccChhhcCCceEEEeccccCCccc
Confidence 478999999999987763 678999999999998 555555322211
Q ss_pred CcchhhccCccccccccccCCCCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHH
Q 039205 53 DLPFLCRMDRRGRYIWEDHRPRSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSF 132 (158)
Q Consensus 53 r~p~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~al 132 (158)
+..... .+.. .+. ......+....++.++..|..++..|+... ..++.|+.+|
T Consensus 195 ~g~~~~----~~~~--~~~-~~~~~~~ip~~aD~LiayST~pG~vs~r~~--------------------~~GS~FiqaL 247 (305)
T 1f1j_A 195 DGIQAD----SGPI--NDT-DANPRYKIPVEADFLFAYSTVPGYYSWRSP--------------------GRGSWFVQAL 247 (305)
T ss_dssp CCBC----------------------CBCTTTTEEEEESSCTTBCCEEET--------------------TTEEHHHHHH
T ss_pred CCcccc----CCcc--ccc-ccccccccCCCCCEEEEEECCCCeeccCCC--------------------CCCCHHHHHH
Confidence 100000 0000 000 000011234567899999999999998644 3577999999
Q ss_pred HHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 133 IQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 133 l~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
++.|++ ++...-.+|+.+|+..|.
T Consensus 248 ~~~l~~~~~~~dl~~ilt~Vn~~V~ 272 (305)
T 1f1j_A 248 CSILEEHGKDLEIMQILTRVNDRVA 272 (305)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 999998 567999999999999885
No 6
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=98.32 E-value=2.3e-06 Score=69.22 Aligned_cols=118 Identities=14% Similarity=0.034 Sum_probs=82.1
Q ss_pred cchHHHHHHHHHHHHhhC-CCCCEEEEEeccCCC----------------------------------cccccCCCCCcC
Q 039205 8 WPTKYNMRMALCWLMQGC-QPGDSLVFHFSGHAS----------------------------------CIIDACHSGTML 52 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~a-~~gD~v~f~fSGHG~----------------------------------~i~DcCHSG~~~ 52 (158)
..|++.|.++|+.+.+.. +..|.++++|.|||. +|+|+|--....
T Consensus 62 dlt~~em~~~l~~~~~~~~~~~d~~v~~~lsHG~~g~i~~~D~~v~l~~i~~~f~~~~cp~L~gKPKlf~iqACRg~~~~ 141 (250)
T 2j32_A 62 DLTREEIVELMRDVSKEDHSKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELD 141 (250)
T ss_dssp SCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCEETTEEEETTEEEEHHHHHHTTSTTTCGGGTTSCEEEEEESCSEEECB
T ss_pred CCCHHHHHHHHHHHHHhhccCCCEEEEEECCCCCCCeEEecCCcEEHHHHHHHhccccChhHcCCCeEEEEecccCCccc
Confidence 579999999999998774 678999999999998 333444211000
Q ss_pred CcchhhccCccccccccccCCCCC--CcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHH
Q 039205 53 DLPFLCRMDRRGRYIWEDHRPRSG--TWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITY 130 (158)
Q Consensus 53 r~p~~~~~~~~g~~~~~~~~~~~g--~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~ 130 (158)
+ |. .. +..+..+ ..+.+.+++.++..|..+...|+... ..++.|+.
T Consensus 142 ~----------g~-~~-~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~r~~--------------------~~gS~fiq 189 (250)
T 2j32_A 142 C----------GI-AT-DSGVDDDMACHKIPVEADFLYAYSTAPGYYSWRNS--------------------KDGSWFIQ 189 (250)
T ss_dssp C----------CC-CC-----------CCCCTTTTEEEEESSCTEECCEEET--------------------TTEEHHHH
T ss_pred C----------Cc-cc-cCCccccccccccCCCCCEEEEEeCCCccEEecCC--------------------CCCcHHHH
Confidence 0 00 00 0000001 12234567899999999999998754 36789999
Q ss_pred HHHHHHhc-CCCCCHHHHHHHHHHHHhc
Q 039205 131 SFIQASEL-GHGTTYGRMLTSMRSTIYH 157 (158)
Q Consensus 131 all~~L~~-~~~~s~~~l~~~vr~~v~~ 157 (158)
+|++.|++ .+...-.+|+.+|+..|.+
T Consensus 190 ~L~~~l~~~~~~~dl~~ilt~V~~~V~~ 217 (250)
T 2j32_A 190 SLCAMLKQYADKLEFMHILTRVNRKVAT 217 (250)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 99999998 6779999999999998853
No 7
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=98.28 E-value=5e-06 Score=67.62 Aligned_cols=123 Identities=12% Similarity=0.026 Sum_probs=82.1
Q ss_pred cchHHHHHHHHHHHHhh-CCCCCEEEEEeccCCC----------------------------------cccccCCCCCcC
Q 039205 8 WPTKYNMRMALCWLMQG-CQPGDSLVFHFSGHAS----------------------------------CIIDACHSGTML 52 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~-a~~gD~v~f~fSGHG~----------------------------------~i~DcCHSG~~~ 52 (158)
..|++.|.++|+.+.+. .+..|.++++|.|||. +|+|+|-.....
T Consensus 65 dlt~~em~~~l~~~~~~~h~~~d~~v~~~lsHG~~g~i~~~D~~v~l~~i~~~f~~~~cpsL~gKPKlf~iQACRG~~~~ 144 (259)
T 3sir_A 65 DCRYKDILRTIEYSASQNHSDSDCILVAILSHGEMGYIYAKDTQYKLDNIWSFFTANHCPSLAGKPKLFFIQACQGDRLD 144 (259)
T ss_dssp ECSHHHHHHHHHHHHTSCCTTEEEEEEEEEECTTCCCCCCTTHHHHHHHTTGGGSTTTCGGGSSSCEEEEEEEETTSCEE
T ss_pred CCCHHHHHHHHHHHHHhhccCCCEEEEEEecCCCCCeEEeCCCcEEHHHHHHHhhhccCccccCCCCEEEEecCCCCccc
Confidence 57999999999998865 5778999999999998 344444321110
Q ss_pred CcchhhccCccccccccccCCCCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHH
Q 039205 53 DLPFLCRMDRRGRYIWEDHRPRSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSF 132 (158)
Q Consensus 53 r~p~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~al 132 (158)
+.-.... +. .+.........+.+..++.++..|..++..|+... ..+..|+.+|
T Consensus 145 ~g~~~~~----~~--~~~dg~~~~~~~ip~~aD~Li~yST~pG~vs~r~~--------------------~~GS~fiq~L 198 (259)
T 3sir_A 145 GGVTMQR----SQ--TETDGDSSMSYKIPVHADFLIAYSTVPGFYSWRNT--------------------TRGSWFMQSL 198 (259)
T ss_dssp C-----------------------CEECCCCTTEEEEEEEECCSCCCSSC--------------------CCSCHHHHHH
T ss_pred CCccccc----Cc--ccccCcccccccCCCCCCEEEEEECCCCeEeecCC--------------------CCCcHHHHHH
Confidence 0000000 00 00000000112234567899999999999998644 3578999999
Q ss_pred HHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 133 IQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 133 l~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
++.|++ ++...-.+|+.+|+..|.
T Consensus 199 ~~~l~~~~~~~dl~~ilt~V~~~V~ 223 (259)
T 3sir_A 199 CAELAANGKRLDILTLLTFVCQRVA 223 (259)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 999998 567999999999999886
No 8
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=98.27 E-value=5e-06 Score=68.11 Aligned_cols=122 Identities=12% Similarity=0.029 Sum_probs=82.3
Q ss_pred CcchHHHHHHHHHHHHhh-CCCCCEEEEEeccCCC----------------------------------cccccCCCCCc
Q 039205 7 KWPTKYNMRMALCWLMQG-CQPGDSLVFHFSGHAS----------------------------------CIIDACHSGTM 51 (158)
Q Consensus 7 ~~aTr~nI~~al~~L~~~-a~~gD~v~f~fSGHG~----------------------------------~i~DcCHSG~~ 51 (158)
...|++.|.++|+.+.+. .+..|.++++|.|||. +|+|+|--.-.
T Consensus 76 ~dlt~~em~~~l~~~~~~dh~~~d~~v~~~lsHG~~~~i~~~D~~v~l~~i~~~f~~~~cpsL~gKPKlffiqACRg~~~ 155 (272)
T 1m72_A 76 PNLKSEEINKFIQQTAEMDHSDADCLLVAVLTHGELGMLYAKDTHYKPDNLWYYFTADKCPTLAGKPKLFFIQACQGDRL 155 (272)
T ss_dssp ESCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCEETTEEECSSSEECTTHHHHTTSTTTCGGGTTSCEEEEEESCSSSBC
T ss_pred cCcCHHHHHHHHHHHHHhhcCCCCEEEEEEcCCCCCCEEEecCCcEEHHHHHHHhccccChhhcCCceEEEEeCCCCCcc
Confidence 357999999999999876 4778999999999997 44444431111
Q ss_pred CCcchhhccCccccccccccCCCCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHH
Q 039205 52 LDLPFLCRMDRRGRYIWEDHRPRSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYS 131 (158)
Q Consensus 52 ~r~p~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~a 131 (158)
.+.....+ .+.........+.+..++.++..|..+...|+... ..+..|+.+
T Consensus 156 ~~g~~~~~--------~~~d~~~~~~~~iP~~aD~Li~ysT~pG~vs~r~~--------------------~~GS~fiq~ 207 (272)
T 1m72_A 156 DGGITLSR--------TETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRNT--------------------TRGSWFMQA 207 (272)
T ss_dssp BCCEEEEC-----------------CEEECTTCSEEEEESSCTTBCCEEET--------------------TTEEHHHHH
T ss_pred cCCccccc--------cccccccccccccCCCCCEEEEEeCCCCcEeecCC--------------------CCCCHHHHH
Confidence 00000000 00000000011234457889999999999998644 357889999
Q ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 132 FIQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 132 ll~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
|++.|++ ++...-.+|+.+|+..|.
T Consensus 208 L~~~l~~~~~~~dl~~ilt~V~~~V~ 233 (272)
T 1m72_A 208 LCEELRYAGTERDILTLLTFVCQKVA 233 (272)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 9999998 577999999999999885
No 9
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=98.23 E-value=9.5e-06 Score=66.70 Aligned_cols=119 Identities=14% Similarity=0.048 Sum_probs=83.7
Q ss_pred cchHHHHHHHHHHHHhh-CCCCCEEEEEeccCCC----------------------------------cccccCCCCCcC
Q 039205 8 WPTKYNMRMALCWLMQG-CQPGDSLVFHFSGHAS----------------------------------CIIDACHSGTML 52 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~-a~~gD~v~f~fSGHG~----------------------------------~i~DcCHSG~~~ 52 (158)
..|++.|.++|+.+.+. ....|.++++|.+||. +|+|+|--....
T Consensus 90 dlt~~em~~~l~~f~~~dh~~~d~~vv~ilSHG~~g~i~g~D~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~ 169 (277)
T 4ehd_A 90 DLTREEIVELMRDVSKEDHSKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELD 169 (277)
T ss_dssp SCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCEETTEEEETTEEEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCB
T ss_pred CCCHHHHHHHHHHHHhhcccCCCEEEEEEEcCCCCCEEEEeCCcEeHHHHHHHhhhccCchhcCCccEEEEecCCCCccc
Confidence 47999999999999875 5778999999999998 556666422111
Q ss_pred CcchhhccCccccccccccCCCCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHH
Q 039205 53 DLPFLCRMDRRGRYIWEDHRPRSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSF 132 (158)
Q Consensus 53 r~p~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~al 132 (158)
+ ..... .+. . ...+..+.+..++.++..|..++..|+... ..+..|+.+|
T Consensus 170 ~-g~~~~---~~~----~--~~~~~~~ip~~aD~Li~yST~pG~vs~r~~--------------------~~GS~fIq~L 219 (277)
T 4ehd_A 170 C-GIETD---SGV----D--DDMACHKIPVEADFLYACSTAPGYYSWRNS--------------------KDGSWFIQSL 219 (277)
T ss_dssp C-CCCC-------------------CCCCTTTTEEEEESSCTTBCCEEET--------------------TTEEHHHHHH
T ss_pred C-Ccccc---CCc----c--ccccccccCCCCCEEEEEECCCCeEeecCC--------------------CCCcHHHHHH
Confidence 1 00000 000 0 000112234567899999999999998654 3578999999
Q ss_pred HHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 133 IQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 133 l~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
++.|++ .+...-.+|+.+|+..|.
T Consensus 220 ~~~l~~~~~~~dl~~ilt~V~~~V~ 244 (277)
T 4ehd_A 220 CAMLKQYADKLEFMHILTRVNRKVA 244 (277)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 999998 677999999999999885
No 10
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=98.19 E-value=7e-06 Score=68.58 Aligned_cols=121 Identities=12% Similarity=0.012 Sum_probs=81.1
Q ss_pred cchHHHHHHHHHHHHhh-CCCCCEEEEEeccCCC----------------------------------cccccCCCCCcC
Q 039205 8 WPTKYNMRMALCWLMQG-CQPGDSLVFHFSGHAS----------------------------------CIIDACHSGTML 52 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~-a~~gD~v~f~fSGHG~----------------------------------~i~DcCHSG~~~ 52 (158)
..|++.|.++|+.+.+. .+..|.++|+|.|||. +|+|+|--.-..
T Consensus 105 dlt~~em~~~l~~f~~~dh~~~D~~vv~ilSHG~~g~i~g~D~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~d 184 (310)
T 2nn3_C 105 NLKSEEINKFIQQTAEMDHSDADCLLVAVLTAGELGMLYAKDTHYKPDNLWYYFTADKCPTLAGKPKLFFIQACQGDRLD 184 (310)
T ss_dssp SCCHHHHHHHHHHHHSSCGGGBSCEEEEEEEEEETTEEECSSCEECTHHHHGGGSTTTCGGGTTSCEEEEEEEECCCCCC
T ss_pred CCCHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCCEEEecCCcEEHHHHHHHhccccChhhcCCceEEEEecccCCccc
Confidence 57999999999999876 4778999999999998 333333211110
Q ss_pred CcchhhccCccccccccccCCCCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHH
Q 039205 53 DLPFLCRMDRRGRYIWEDHRPRSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSF 132 (158)
Q Consensus 53 r~p~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~al 132 (158)
+.....+ .+.........+.+..++.++..|..+...|+... ..+..|+.+|
T Consensus 185 ~g~~~~~--------~~~d~~~~~~~~iP~~aD~LiayST~pG~vS~R~~--------------------~~GSwFIqaL 236 (310)
T 2nn3_C 185 GGITLSR--------TETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRNT--------------------TRGSWFMQAL 236 (310)
T ss_dssp CCC---------------------CCCCCCSTTEEEEECCCCCEEESSSS--------------------EEEEHHHHHH
T ss_pred cCccccc--------cccccccccccccCCCCCEEEEEeCCCCceeecCC--------------------CCCCHHHHHH
Confidence 0000000 00000000011234457889999999999998643 3678999999
Q ss_pred HHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 133 IQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 133 l~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
++.|++ ++...-.+|+.+|+..|.
T Consensus 237 ~~~l~~~~~~~dl~~ilt~Vn~~V~ 261 (310)
T 2nn3_C 237 CEELRYAGTERDILTLLTFVCQKVA 261 (310)
T ss_dssp HHHHHTTTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 999998 467999999999999885
No 11
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=98.09 E-value=3.3e-05 Score=63.12 Aligned_cols=129 Identities=12% Similarity=-0.041 Sum_probs=82.5
Q ss_pred cchHHHHHHHHHHHHhh-CCCCCEEEEEeccCCC-----------------------------------cccccCCCCCc
Q 039205 8 WPTKYNMRMALCWLMQG-CQPGDSLVFHFSGHAS-----------------------------------CIIDACHSGTM 51 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~-a~~gD~v~f~fSGHG~-----------------------------------~i~DcCHSG~~ 51 (158)
..|.+.|.++|+.+.+. -+..|.++++|.+||. +|+|+|-....
T Consensus 70 dlt~~em~~~l~~~~~~~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~ 149 (271)
T 3h11_B 70 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDNY 149 (271)
T ss_dssp SCCHHHHHHHHHHHHHSCCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEEEEESCCSSBC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhccChhhcCCccEEEEeccCCCcc
Confidence 57999999999998764 3678999999999998 45555542221
Q ss_pred CCcchhhccCccccccccccCCCCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHH
Q 039205 52 LDLPFLCRMDRRGRYIWEDHRPRSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYS 131 (158)
Q Consensus 52 ~r~p~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~a 131 (158)
-+.-.+.. +.......+...........+..++.++..|..++..|+... ..+..|+.+
T Consensus 150 ~~gv~~~~-~~~~~~~~e~d~~~~~~~~iP~~aD~Li~yST~pG~vs~R~~--------------------~~GS~fIq~ 208 (271)
T 3h11_B 150 QKGIPVET-ASEEQPYLEMALSSPQTRYIPDEADFLLGMATVNNCVSYRNP--------------------AEGTWYIQS 208 (271)
T ss_dssp C-----------------------CCCCSCSSSSEEEEESSCTTBCCEEET--------------------TTEEHHHHH
T ss_pred cCCceecc-CCccccccccccccccccccCCCCceEEEEECCCCceeecCC--------------------CCCcHHHHH
Confidence 11000000 000000000000000111234567899999999999998654 356799999
Q ss_pred HHHHHhc-CC-CCCHHHHHHHHHHHHhc
Q 039205 132 FIQASEL-GH-GTTYGRMLTSMRSTIYH 157 (158)
Q Consensus 132 ll~~L~~-~~-~~s~~~l~~~vr~~v~~ 157 (158)
|++.|++ .+ ...-.+|+.+|+..|.+
T Consensus 209 L~~~l~~~~~~~~dl~~ilt~Vn~~V~~ 236 (271)
T 3h11_B 209 LCQSLRERCPRGDDILTILTEVNYEVSN 236 (271)
T ss_dssp HHHHHHHHGGGTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHhh
Confidence 9999998 45 79999999999998864
No 12
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=98.02 E-value=2.8e-05 Score=64.63 Aligned_cols=129 Identities=19% Similarity=0.181 Sum_probs=81.1
Q ss_pred cchHHHHHHHHHHHHh--hCCCCCEEEEEeccCCC--cccccCCC---CCcCCcc-----h------------------h
Q 039205 8 WPTKYNMRMALCWLMQ--GCQPGDSLVFHFSGHAS--CIIDACHS---GTMLDLP-----F------------------L 57 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~--~a~~gD~v~f~fSGHG~--~i~DcCHS---G~~~r~p-----~------------------~ 57 (158)
..|++.|.++|+.+.+ +.+..|.++++|.|||. .|+..=++ +....+. + .
T Consensus 103 dlt~~em~~~l~~f~~~~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F~~~~CpsL~gKPKlffIQA 182 (302)
T 3e4c_A 103 NLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQA 182 (302)
T ss_dssp SCCHHHHHHHHHHHHTCGGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHTSTTTCGGGTTSCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhhccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHHhhhcchhhcCCccEEEEEC
Confidence 5799999999999985 45678999999999998 22221111 0111110 0 0
Q ss_pred hccCcccccccc-ccCC---------C-----CCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCC
Q 039205 58 CRMDRRGRYIWE-DHRP---------R-----SGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNI 122 (158)
Q Consensus 58 ~~~~~~g~~~~~-~~~~---------~-----~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g 122 (158)
|+.+..+. .|. +... . .+..+...+++.++..|..++..|+...
T Consensus 183 CRG~~~~~-~~~~ds~~~~~~~~~~~~~~~~~d~~~~ip~~aDfLi~yST~pG~vS~R~~-------------------- 241 (302)
T 3e4c_A 183 ARGDSPGV-VWFKDSVGVSGNLSLPTTEEFEDDAIKKAHIEKDFIAFCSSTPDNVSWRHP-------------------- 241 (302)
T ss_dssp ECSSSCCC-CCCCCC--------CCCCCCCCCHHHHTSCSSCSEEEEEECCCCCCCSSST--------------------
T ss_pred CCCCCCCc-ceeccCcccccccccccccccccccccccCCCCCEEEEEeCCCCceeecCC--------------------
Confidence 00000000 000 0000 0 0011234567889999999999998654
Q ss_pred CccchHHHHHHHHHhc-CCCCCHHHHHHHHHHHHhc
Q 039205 123 PSIGAITYSFIQASEL-GHGTTYGRMLTSMRSTIYH 157 (158)
Q Consensus 123 ~~~GafT~all~~L~~-~~~~s~~~l~~~vr~~v~~ 157 (158)
..+..|+.+|++.|++ .+...-.+|+.+|+..|.+
T Consensus 242 ~~GSwFIqaL~~~l~~~~~~~dl~~il~~V~~~v~~ 277 (302)
T 3e4c_A 242 TMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFEQ 277 (302)
T ss_dssp TCCCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHTSS
T ss_pred CCCcHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhC
Confidence 3567999999999998 6779999999999988753
No 13
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=97.95 E-value=7.7e-05 Score=60.90 Aligned_cols=57 Identities=11% Similarity=-0.053 Sum_probs=48.0
Q ss_pred cCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHHHHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 80 GASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSFIQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 80 ~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~all~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
.+.+++.++..|..+...|+... ..+..|+.+|++.|++ .+...-.+|+.+|+..|.
T Consensus 196 ip~~aD~Li~ysT~pG~vs~R~~--------------------~~GS~fiq~L~~~l~~~~~~~dl~~ilt~V~~~V~ 253 (277)
T 1nw9_B 196 LPTPSDIFVSYSTFPGFVSWRDP--------------------KSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVS 253 (277)
T ss_dssp CCCSCSEEEEEECCCCBSSTTCT--------------------TSCBHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEcCCCCeEEEcCC--------------------CCCcHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence 34567899999999999998643 2466899999999998 678999999999999885
No 14
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=97.93 E-value=7.2e-05 Score=61.35 Aligned_cols=129 Identities=12% Similarity=0.070 Sum_probs=84.9
Q ss_pred cchHHHHHHHHHHHHhh-CCCCCEEEEEeccCCC----------------------------------cccccCCCCCcC
Q 039205 8 WPTKYNMRMALCWLMQG-CQPGDSLVFHFSGHAS----------------------------------CIIDACHSGTML 52 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~-a~~gD~v~f~fSGHG~----------------------------------~i~DcCHSG~~~ 52 (158)
..|++.|.++|+.+.+. -+..|.++++|.+||. +|+|+|-....-
T Consensus 67 dlt~~em~~~l~~~~~~~h~~~d~~vv~ilSHG~~g~i~g~D~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~ 146 (278)
T 3od5_A 67 DLKAEELLLKIHEVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHD 146 (278)
T ss_dssp SCCHHHHHHHHHHHHHSCCTTBSCEEEEEESCEETTEEECSSSEEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCB
T ss_pred CCCHHHHHHHHHHHHhhcccCCCEEEEEEECCCCCCEEEEeCCeEEHHHHHHHhccccChhhcCCCcEEEEecCCCCccc
Confidence 57999999999998654 4678999999999998 666666522211
Q ss_pred CcchhhccCcc-c--cccc-cccCCCCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchH
Q 039205 53 DLPFLCRMDRR-G--RYIW-EDHRPRSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAI 128 (158)
Q Consensus 53 r~p~~~~~~~~-g--~~~~-~~~~~~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~Gaf 128 (158)
+ ......... . .... +.........+.+..++.++..|..++..|+... ..+..|
T Consensus 147 ~-g~~~~~~~~~~~~~l~~~~~~~~~~~~~~iP~~aD~Li~yST~pG~vs~R~~--------------------~~GS~f 205 (278)
T 3od5_A 147 V-PVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRET--------------------VNGSWY 205 (278)
T ss_dssp C-EECCC---------------------CCCEETTTTEEEEESSCTTBCCEEET--------------------TTEEHH
T ss_pred C-CeecccccccccccccccccccccccccccCCCCCeEEEEeCCCCeEEecCC--------------------CCCcHH
Confidence 1 100000000 0 0000 0000001112234568999999999999998754 357899
Q ss_pred HHHHHHHHhc-CCCCCHHHHHHHHHHHHhc
Q 039205 129 TYSFIQASEL-GHGTTYGRMLTSMRSTIYH 157 (158)
Q Consensus 129 T~all~~L~~-~~~~s~~~l~~~vr~~v~~ 157 (158)
..+|++.|++ .+...-.+|+.+|+..|.+
T Consensus 206 Iq~L~~~l~~~~~~~dl~~ilt~Vn~~V~~ 235 (278)
T 3od5_A 206 IQDLCEMLGKYGSSLEFTELLTLVNRKVSQ 235 (278)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 9999999998 5679999999999998863
No 15
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=97.82 E-value=0.00012 Score=61.14 Aligned_cols=131 Identities=9% Similarity=-0.035 Sum_probs=83.1
Q ss_pred CcchHHHHHHHHHHHHhhC-C-CCCEEEEEeccCCC---------------------------------------ccccc
Q 039205 7 KWPTKYNMRMALCWLMQGC-Q-PGDSLVFHFSGHAS---------------------------------------CIIDA 45 (158)
Q Consensus 7 ~~aTr~nI~~al~~L~~~a-~-~gD~v~f~fSGHG~---------------------------------------~i~Dc 45 (158)
...|++.|.++|+.+.+.. + ..|.++++|.+||. +|+|+
T Consensus 104 ~dlt~~em~~~l~~f~~~~h~~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlffiQA 183 (316)
T 2fp3_A 104 GNVNQDQFFKLLTMVTSSSYVQNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHFQTAKCPYLVNKPKVLMFPF 183 (316)
T ss_dssp CSCCHHHHHHHHHHHHTSHHHHTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTTSTTTCGGGTTSCEEEEESC
T ss_pred cCCCHHHHHHHHHHHHHHhhcCCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHhccccChhhcCCceEEEEec
Confidence 3579999999999998765 3 79999999999996 56666
Q ss_pred CCCCCcCCcchhhccCccc-ccc-cc------ccCC-CCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHH
Q 039205 46 CHSGTMLDLPFLCRMDRRG-RYI-WE------DHRP-RSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYE 116 (158)
Q Consensus 46 CHSG~~~r~p~~~~~~~~g-~~~-~~------~~~~-~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~ 116 (158)
|-..-..+.-........+ ... .. .... .....+....++.++..|..+...|+...
T Consensus 184 CRG~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~iP~~aD~Li~yST~pG~vS~R~~-------------- 249 (316)
T 2fp3_A 184 ARGDEYDLGHPKNQGNLMEPVYTAQEEKWPDTQTEGIPSPSTNVPSLADTLVCYANTPGYVTHRDL-------------- 249 (316)
T ss_dssp C---------------------------------------CCCCCCCCSEEEEECCCSCCCBTTTB--------------
T ss_pred CCCCcccCCceeccCcccccccccccccccccccccccccccccCCCCCEEEEEeCCCCceeccCC--------------
Confidence 6422111100000000000 000 00 0000 01112234568899999999999998643
Q ss_pred hhccCCCccchHHHHHHHHHhc-CCCCCHHHHHHHHHHHHhc
Q 039205 117 RALSNIPSIGAITYSFIQASEL-GHGTTYGRMLTSMRSTIYH 157 (158)
Q Consensus 117 ~~~~~g~~~GafT~all~~L~~-~~~~s~~~l~~~vr~~v~~ 157 (158)
..+..|+.+|++.|++ .+...-.+||.+|+..|.+
T Consensus 250 ------~~GSwFIq~L~~~l~~~~~~~dl~~ilt~Vn~~V~~ 285 (316)
T 2fp3_A 250 ------DTGSWYIQKFCQVMADHAHDTDLEDILKKTSEAVGN 285 (316)
T ss_dssp ------CHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHS
T ss_pred ------CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 3567999999999998 6779999999999999864
No 16
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=97.13 E-value=0.0018 Score=52.91 Aligned_cols=130 Identities=12% Similarity=0.069 Sum_probs=78.5
Q ss_pred cchHHHHHHHHHHHHh--hCCCCCEEEEEeccCCC----cccccCCCC----------------CcCCcc--h---hhcc
Q 039205 8 WPTKYNMRMALCWLMQ--GCQPGDSLVFHFSGHAS----CIIDACHSG----------------TMLDLP--F---LCRM 60 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~--~a~~gD~v~f~fSGHG~----~i~DcCHSG----------------~~~r~p--~---~~~~ 60 (158)
..|.+.|.+.|+.+.+ +.+..|.+++.+.+||. .-.|..... +....| + .|+.
T Consensus 75 dlt~~em~~~l~~~~~~~dh~~~d~~v~~ilSHG~~g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPKlffiQACRG 154 (272)
T 3h11_A 75 HLSMHGISQILGQFACMPEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKMFFIQNYVV 154 (272)
T ss_dssp SCBHHHHHHHHHHHHTCGGGGGCSEEEEEEEEEEETTEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHhccccCCCCEEEEEEEcCCCCCeEEEEcCCcceEeHHHHHHHhccccChhhcCCCcEEEEECCCC
Confidence 4799999999999986 47889999999999998 112221100 000001 0 1110
Q ss_pred C--c--cccccccccCC---------CCCCcccCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccch
Q 039205 61 D--R--RGRYIWEDHRP---------RSGTWKGASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGA 127 (158)
Q Consensus 61 ~--~--~g~~~~~~~~~---------~~g~~~~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~Ga 127 (158)
+ . .|.....+..+ ..+..+.+..++.++..|..+...|+... ..+..
T Consensus 155 ~~~~~~~g~~~~~D~~~~~~~~~~~~~~~~~~iP~~aDfL~~yST~pg~~s~R~~--------------------~~GSw 214 (272)
T 3h11_A 155 SEGQLENSSLLEVDGPAMKNVEFKAQKRGLCTVHREADFFWSLCTADMSLLEQSH--------------------SSPSL 214 (272)
T ss_dssp --------------------------------CCTTCSEEEEEEEEEGGGTSSTT--------------------CCCCH
T ss_pred CCcccCCCcceeccCcccccccccccccccccCCCCCCEEEEEeccCCeEEEEeC--------------------CCCCH
Confidence 0 0 00000000000 00112234567888888888888887433 35678
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHhc
Q 039205 128 ITYSFIQASELGHGTTYGRMLTSMRSTIYH 157 (158)
Q Consensus 128 fT~all~~L~~~~~~s~~~l~~~vr~~v~~ 157 (158)
|..+|.+.|++.....-.+|+.+|+..|.+
T Consensus 215 fIq~Lc~~l~~~~~~dl~~ilt~Vn~~V~~ 244 (272)
T 3h11_A 215 YLQCLSQKLRQERKRPLLDLHIELNGYMYD 244 (272)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 999999999986568999999999998853
No 17
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=96.31 E-value=0.0032 Score=48.39 Aligned_cols=33 Identities=21% Similarity=0.164 Sum_probs=29.0
Q ss_pred cchHHHHHHHHHHHHhh--CCCCCEEEEEeccCCC
Q 039205 8 WPTKYNMRMALCWLMQG--CQPGDSLVFHFSGHAS 40 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~--a~~gD~v~f~fSGHG~ 40 (158)
..|++.|.++|+.+.+. .+..|.++++|.|||.
T Consensus 86 dlt~~em~~~l~~f~~~~d~~~~d~~v~~~lsHG~ 120 (178)
T 2h54_A 86 NLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHGI 120 (178)
T ss_dssp SCCHHHHHHHHHHHHTCGGGGGCSCEEEEEESCBC
T ss_pred CCCHHHHHHHHHHHHhhhhcCCCCEEEEEEecCCC
Confidence 47999999999999863 4678999999999998
No 18
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=90.59 E-value=0.24 Score=37.45 Aligned_cols=34 Identities=21% Similarity=0.099 Sum_probs=29.5
Q ss_pred CcchHHHHHHHHHHHHh--hCCCCCEEEEEeccCCC
Q 039205 7 KWPTKYNMRMALCWLMQ--GCQPGDSLVFHFSGHAS 40 (158)
Q Consensus 7 ~~aTr~nI~~al~~L~~--~a~~gD~v~f~fSGHG~ 40 (158)
...|.+.|.+.|+.+.+ .-+..|.+++.+.+||.
T Consensus 78 ~dlt~~em~~~l~~~~~~~dh~~~dc~vv~ilSHG~ 113 (167)
T 1pyo_A 78 CDQTAQEMQEKLQNFAQLPAHRVTDSCIVALLSHGV 113 (167)
T ss_dssp ESCCHHHHHHHHHHHHTCGGGGTSSEEEEEEESCEE
T ss_pred eCCCHHHHHHHHHHhhhhhhccCCCEEEEEeCCCCC
Confidence 35789999999999987 45678999999999998
No 19
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=88.23 E-value=0.36 Score=35.63 Aligned_cols=33 Identities=12% Similarity=-0.024 Sum_probs=28.8
Q ss_pred cchHHHHHHHHHHHHhhC-CCCCEEEEEeccCCC
Q 039205 8 WPTKYNMRMALCWLMQGC-QPGDSLVFHFSGHAS 40 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~a-~~gD~v~f~fSGHG~ 40 (158)
..|.+.|.+.|+.+.+.- +..|.+++.+.+||.
T Consensus 62 dlt~~em~~~l~~~~~~dh~~~dc~vv~ilSHG~ 95 (146)
T 2dko_A 62 DLTREEIVELMRDVSKEDHSKRSSFVCVLLSHGE 95 (146)
T ss_dssp SCCHHHHHHHHHHHHHSCCTTEEEEEEEEESCEE
T ss_pred CCCHHHHHHHHHHHHHhhcCCCCeEEEEeccCCC
Confidence 479999999999988764 667999999999998
No 20
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=86.97 E-value=0.58 Score=35.15 Aligned_cols=34 Identities=12% Similarity=-0.087 Sum_probs=29.2
Q ss_pred CcchHHHHHHHHHHHHhh-CCCCCEEEEEeccCCC
Q 039205 7 KWPTKYNMRMALCWLMQG-CQPGDSLVFHFSGHAS 40 (158)
Q Consensus 7 ~~aTr~nI~~al~~L~~~-a~~gD~v~f~fSGHG~ 40 (158)
...|.+.|.+.|+.+.+. -+..|.+++.+.+||.
T Consensus 75 ~dlt~~em~~~l~~~~~~dh~~~dc~vv~ilSHG~ 109 (164)
T 1qtn_A 75 DDCTVEQIYEILKIYQLMDHSNMDCFICCILSHGD 109 (164)
T ss_dssp ESCCHHHHHHHHHHHHHSCCTTCSCEEEEEESCEE
T ss_pred cCCCHHHHHHHHHHHHHhhccCCCEEEEEeCCCCC
Confidence 357899999999998765 3678999999999998
No 21
>2ql9_B Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_B* 2ql5_B* 2qlb_B* 2qlf_B 2qlj_B* 3edr_B 3ibc_B 3ibf_B 1i51_B
Probab=82.92 E-value=4.7 Score=27.27 Aligned_cols=56 Identities=11% Similarity=-0.025 Sum_probs=46.5
Q ss_pred CCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHHHHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 81 ASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSFIQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 81 ~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~all~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
+..++.++.-|+.++-.|+-.. ..+..|-.+|.+.|++ ++...-.+|+.+|+.+|.
T Consensus 8 P~~aDfL~~yST~pG~~S~R~~--------------------~~GSwfIq~Lc~~l~~~~~~~dl~~ilt~Vn~~V~ 64 (97)
T 2ql9_B 8 PVEADFLFAYSTVPGYYSWRSP--------------------GRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVA 64 (97)
T ss_dssp CTTTTEEEEESSCTTBCCEEET--------------------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeCCCCcEeeecC--------------------CCCCeeHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 4567889999999998887433 3577899999999998 667899999999998885
No 22
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=82.38 E-value=0.94 Score=34.43 Aligned_cols=33 Identities=9% Similarity=-0.109 Sum_probs=28.3
Q ss_pred cchHHHHHHHHHHHHhhC-CCCCEEEEEeccCCC
Q 039205 8 WPTKYNMRMALCWLMQGC-QPGDSLVFHFSGHAS 40 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~a-~~gD~v~f~fSGHG~ 40 (158)
..|.+.|.+.|+.+.+.- +..|.+++.+.+||.
T Consensus 90 dlt~~em~~~l~~~s~~dh~~~dc~vvvilSHG~ 123 (173)
T 2ql9_A 90 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGE 123 (173)
T ss_dssp SCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCEE
T ss_pred CCCHHHHHHHHHHHHHhhccCCCeEEEeecCCCC
Confidence 469999999999987653 567999999999998
No 23
>2dko_B Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 2c2k_B* 2c2m_B* 2c2o_B* 2c1e_B* 2cdr_B* 2cnk_B* 2cnl_B* 2cnn_B* 2cno_B* 2cjy_B 1pau_B 1re1_B* 1rhk_B* 1rhm_B* 1rhq_B* 1rhr_B* 1rhu_B* 1rhj_B* 1i3o_B* 3edq_B ...
Probab=81.99 E-value=5.2 Score=27.46 Aligned_cols=57 Identities=11% Similarity=-0.039 Sum_probs=47.2
Q ss_pred cCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHHHHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 80 GASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSFIQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 80 ~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~all~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
.+..++.++.-|+.++-.|+-.+ ..+..|-.+|.+.|++ ++...-.+|+.+|+.+|.
T Consensus 13 iP~~aDfL~~yST~pG~vS~R~~--------------------~~GSwfIq~Lc~~l~~~~~~~dl~~ilT~Vn~~V~ 70 (103)
T 2dko_B 13 IPVEADFLYAYSTAPGYYSWRNS--------------------KDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVA 70 (103)
T ss_dssp CCTTTTEEEEESSCTTBCCEEET--------------------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEeCCCCcEeEEcC--------------------CCCCeeHHHHHHHHHHhCCcccHHHHHHHHHHHHH
Confidence 35667899999999999987543 3567899999999998 667999999999998875
No 24
>2xzd_B Caspase-3; hydrolase-protein binding complex, de novo protein, apoptosi ankyrin repeat protein, ribosome display; 2.10A {Homo sapiens} PDB: 2xzt_B 2y0b_B
Probab=81.38 E-value=5.3 Score=28.27 Aligned_cols=57 Identities=11% Similarity=-0.039 Sum_probs=47.1
Q ss_pred cCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHHHHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 80 GASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSFIQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 80 ~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~all~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
....++.++.-|+.++-.|+-.+ ..+..|-.+|.+.|++ .+...-.+|+.+|+.+|.
T Consensus 12 iP~~aDfLi~yST~pG~vS~R~~--------------------~~GSwFIQ~Lc~vl~~~~~~~dl~~ilT~Vn~~Va 69 (118)
T 2xzd_B 12 IPVEADFLYAYSTAPGYYSWRNS--------------------KDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVA 69 (118)
T ss_dssp ECTTTTEEEEESSCTTBCCCEET--------------------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEeCCCCCEeeEeC--------------------CCCCccHHHHHHHHHHhCCcccHHHHHHHHHHHHH
Confidence 35567889999999999887543 3567899999999998 667999999999998875
No 25
>1sc3_B Interleukin-1 beta convertase; malonate-bound caspase-1, hydrolase; 1.80A {Homo sapiens} SCOP: c.17.1.1 PDB: 1ice_B 1bmq_B* 1rwm_B* 1rwk_B* 1rwo_B* 1rwp_B* 1rwv_B* 1rww_B* 1rwn_B* 1sc1_B 1rwx_B 1sc4_B 2h4y_B* 2hbq_B* 2hbr_B* 3ns7_B* 3d6f_B* 3d6h_B* 3d6m_B* 2h4w_B* ...
Probab=80.07 E-value=8 Score=25.76 Aligned_cols=56 Identities=11% Similarity=0.071 Sum_probs=46.1
Q ss_pred CCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHHHHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 81 ASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSFIQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 81 ~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~all~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
+..++.++.-|+.++-.|+-.. ..+.-|-.+|.+.|++ .+...-.+|+.+|+..+.
T Consensus 6 p~~aDfL~~yST~pG~~S~R~~--------------------~~GSwfIq~Lc~~l~~~~~~~dl~~il~~V~~~v~ 62 (88)
T 1sc3_B 6 HIEKDFIAFCSSTPDNVSWRHP--------------------TMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFE 62 (88)
T ss_dssp CSSCSEEEEESSCTTBCCCEET--------------------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHTC
T ss_pred CCCCCEEEEEeCCCCCEeeEcC--------------------CCCCHHHHHHHHHHHHhCCcCcHHHHHHHHHHHHh
Confidence 4567899999999998887543 3567899999999998 667899999999998774
No 26
>1pyo_B Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 2p2c_B 3r5j_B 3r6g_B 3r7b_B 3r7n_B 3r7s_B 3r6l_B
Probab=77.89 E-value=8 Score=26.56 Aligned_cols=57 Identities=11% Similarity=0.030 Sum_probs=47.0
Q ss_pred cCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHHHHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 80 GASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSFIQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 80 ~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~all~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
.+..++.++.-|+.++-.|+-.. ..+..|-.+|.+.|++ .....-.+|+.+|+..|.
T Consensus 11 iP~~aDfL~~yST~pG~~S~R~~--------------------~~GSwFIq~Lc~~l~~~~~~~dl~~ilt~Vn~~V~ 68 (105)
T 1pyo_B 11 LPTRSDMICGYACLKGTAAMRNT--------------------KRGSWYIEALAQVFSERACDMHVADMLVKVNALIK 68 (105)
T ss_dssp ECSSCSEEEEESSCTTBCCEEET--------------------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEeCCCCcEEEecC--------------------CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Confidence 35577889998999988887433 3577899999999998 677999999999999885
No 27
>1qtn_B Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_B* 3kjq_B* 2y1l_B 1f9e_B* 1qdu_B*
Probab=77.56 E-value=5.5 Score=26.94 Aligned_cols=57 Identities=11% Similarity=-0.064 Sum_probs=46.0
Q ss_pred CCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHHHHHHhc-CCCC-CHHHHHHHHHHHHhc
Q 039205 81 ASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSFIQASEL-GHGT-TYGRMLTSMRSTIYH 157 (158)
Q Consensus 81 ~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~all~~L~~-~~~~-s~~~l~~~vr~~v~~ 157 (158)
+..++.++.-|+.++-.|+-.. ..+..|-.+|.+.|++ ++.. .-.+|+.+|+..|.+
T Consensus 10 P~~aDfL~~ysT~pG~~S~R~~--------------------~~GSwfIq~Lc~~l~~~~~~~~dl~~ilt~Vn~~V~~ 68 (95)
T 1qtn_B 10 PDEADFLLGMATVNNCVSYRNP--------------------AEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSN 68 (95)
T ss_dssp CTTCSEEEEESSCTTBCCEEET--------------------TTEEHHHHHHHHHHHHHGGGTCCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeCCCCcEEEecC--------------------CCCcHHHHHHHHHHHHhCCccccHHHHHHHHHHHHHH
Confidence 4567889999999988887433 3567899999999998 4556 899999999998863
No 28
>3rjm_B Caspase-2; caspase-2, caspase, hydrolase-hydrolase inhibitor; HET: 3PX; 2.55A {Homo sapiens}
Probab=68.61 E-value=21 Score=25.09 Aligned_cols=57 Identities=11% Similarity=0.030 Sum_probs=47.1
Q ss_pred cCCCCCeEEEEecCCCccccccccchhHHHHHHHHHHhhccCCCccchHHHHHHHHHhc-CCCCCHHHHHHHHHHHHh
Q 039205 80 GASGGEAISFSSCDDNQTSADTSSLTDIELFNLMLYERALSNIPSIGAITYSFIQASEL-GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 80 ~~~~~~~i~lsAc~~~q~a~e~~~~~~~~~~~~~~~~~~~~~g~~~GafT~all~~L~~-~~~~s~~~l~~~vr~~v~ 156 (158)
.+..++.++.-|+.++-.|+-.+ ..+-.|-.+|.+.|++ .....-.+|+.+|+..|.
T Consensus 12 iP~eADfL~~yST~pGyvS~R~~--------------------~~GSwFIQ~Lc~vl~~~~~~~dLl~ilT~Vn~~Va 69 (117)
T 3rjm_B 12 LPTRSDMICGYACLKGTAAMRNT--------------------KRGSWYIEALAQVFSERACDMHVADMLVKVNALIK 69 (117)
T ss_dssp BCSSCSEEEEESSCTTCCCEEET--------------------TTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred CCCccCEEEEEcCCCCeECeeec--------------------CCCChHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 35568999999999999998543 3567899999999998 556899999999999885
No 29
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=63.33 E-value=6.1 Score=30.08 Aligned_cols=33 Identities=12% Similarity=0.057 Sum_probs=27.5
Q ss_pred cchHHHHHHHHHHHHhh-CCCCCEEEEEeccCCC
Q 039205 8 WPTKYNMRMALCWLMQG-CQPGDSLVFHFSGHAS 40 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~-a~~gD~v~f~fSGHG~ 40 (158)
..|.+.|.+.|+.+.+. -+..|.+++.+..||.
T Consensus 90 dlt~~em~~~l~~~~~~dh~~~dc~vvvilSHG~ 123 (179)
T 3p45_A 90 DLKAEELLLKIHEVSTVSHADADCFVCVFLSHGE 123 (179)
T ss_dssp SCCHHHHHHHHHHHHTSCCTTBSCEEEEEESCEE
T ss_pred CCCHHHHHHHHHHHhhhhcCCCCEEEEEEeccCC
Confidence 47899999999997643 2466999999999998
No 30
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=61.32 E-value=5.8 Score=28.96 Aligned_cols=18 Identities=28% Similarity=0.421 Sum_probs=15.4
Q ss_pred HHHhhCCCCCEEEEEecc
Q 039205 20 WLMQGCQPGDSLVFHFSG 37 (158)
Q Consensus 20 ~L~~~a~~gD~v~f~fSG 37 (158)
+.+.+.++||.++||=|+
T Consensus 30 n~lr~mk~GD~~~fYhs~ 47 (145)
T 2hd9_A 30 NTLSRVKPGDKLVIYVRQ 47 (145)
T ss_dssp HHHTTCCTTCEEEEEECC
T ss_pred HHHHhCCCCCEEEEEEcc
Confidence 456789999999999985
No 31
>2gbs_A Hypothetical protein RPA0253; alpha-beta, RPR3, NESG, structural genomics, COG294 protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: b.122.1.8
Probab=59.18 E-value=6.8 Score=28.99 Aligned_cols=19 Identities=21% Similarity=0.230 Sum_probs=15.8
Q ss_pred HHHHhhCCCCCEEEEEecc
Q 039205 19 CWLMQGCQPGDSLVFHFSG 37 (158)
Q Consensus 19 ~~L~~~a~~gD~v~f~fSG 37 (158)
++++.+.++||.+|||=|+
T Consensus 37 rn~mr~Mk~GD~~ffYHS~ 55 (145)
T 2gbs_A 37 KLHMVAMRRGDRAFYYHSN 55 (145)
T ss_dssp HHHHHHCCTTCEEEEEETT
T ss_pred HHHHHhcCCCCEEEEEEeC
Confidence 3556678999999999887
No 32
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=59.11 E-value=9.7 Score=31.11 Aligned_cols=30 Identities=30% Similarity=0.413 Sum_probs=25.5
Q ss_pred CCCcchHHHHHHHHHHHHhhCCCCCEEEEEec
Q 039205 5 PLKWPTKYNMRMALCWLMQGCQPGDSLVFHFS 36 (158)
Q Consensus 5 ~~~~aTr~nI~~al~~L~~~a~~gD~v~f~fS 36 (158)
....-|++.|+++|+.| .+++||+|++|=|
T Consensus 18 ~~~~~T~~~L~~~L~~L--GI~~Gd~llVHsS 47 (286)
T 3sma_A 18 DRELVTRDRLASDLAAL--GVRPGGVLLVHAS 47 (286)
T ss_dssp -CCEECHHHHHHHHHHH--TCCTTCEEEEEEC
T ss_pred cCCCcCHHHHHHHHHHc--CCCCCCEEEEEec
Confidence 35567999999999998 5889999999976
No 33
>1zce_A Hypothetical protein ATU2648; alpha-beta protein., structural genomics, PSI, protein struc initiative; 1.30A {Agrobacterium tumefaciens str} SCOP: b.122.1.8
Probab=58.45 E-value=7.1 Score=29.20 Aligned_cols=19 Identities=26% Similarity=0.176 Sum_probs=16.2
Q ss_pred HHHHhhCCCCCEEEEEecc
Q 039205 19 CWLMQGCQPGDSLVFHFSG 37 (158)
Q Consensus 19 ~~L~~~a~~gD~v~f~fSG 37 (158)
++++.+.+.||.+|||=|+
T Consensus 38 rN~mr~Mk~GD~~fFYHS~ 56 (155)
T 1zce_A 38 RNNMRAMKIGDKGFFYHSN 56 (155)
T ss_dssp HHHHHTCCTTCEEEEEETT
T ss_pred HHHHHhccCCCEEEEEEeC
Confidence 4556689999999999997
No 34
>2ar1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP, unknown F; 1.60A {Leishmania major} SCOP: b.122.1.8
Probab=57.28 E-value=7.5 Score=29.58 Aligned_cols=20 Identities=25% Similarity=0.285 Sum_probs=16.1
Q ss_pred HHHHhhCCCCCEEEEEeccC
Q 039205 19 CWLMQGCQPGDSLVFHFSGH 38 (158)
Q Consensus 19 ~~L~~~a~~gD~v~f~fSGH 38 (158)
++++.+.++||.+|||=|+.
T Consensus 53 RN~mr~Mk~GD~vfFYHS~c 72 (172)
T 2ar1_A 53 RNNMRAMSVGDKVLFYHSNT 72 (172)
T ss_dssp HHHHHHCCTTCEEEEEECSS
T ss_pred HHHHHhcCCCCEEEEEecCC
Confidence 45566889999999998863
No 35
>2eve_A Hypothetical protein pspto5229; alpha-beta protein, structural genomics, PSI, protein struct initiative; HET: MPO; 1.60A {Pseudomonas syringae PV} SCOP: b.122.1.8 PDB: 2g2x_A
Probab=56.13 E-value=8.1 Score=28.96 Aligned_cols=19 Identities=21% Similarity=0.329 Sum_probs=15.5
Q ss_pred HHHHhhCCCCCEEEEEecc
Q 039205 19 CWLMQGCQPGDSLVFHFSG 37 (158)
Q Consensus 19 ~~L~~~a~~gD~v~f~fSG 37 (158)
++++.+.+.||.+|||=|+
T Consensus 35 rN~mr~Mk~GD~~ffYHS~ 53 (157)
T 2eve_A 35 RNFLRTMAEGDEFFFYHSS 53 (157)
T ss_dssp HHHHHHCCTTCEEEEEECS
T ss_pred HHHHHhcCCCCEEEEEecC
Confidence 3556678999999999776
No 36
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=53.20 E-value=13 Score=29.95 Aligned_cols=28 Identities=25% Similarity=0.173 Sum_probs=24.5
Q ss_pred CcchHHHHHHHHHHHHhhCCCCCEEEEEec
Q 039205 7 KWPTKYNMRMALCWLMQGCQPGDSLVFHFS 36 (158)
Q Consensus 7 ~~aTr~nI~~al~~L~~~a~~gD~v~f~fS 36 (158)
..-|++.|++.|+.| .+++||+|++|=|
T Consensus 13 ~~~t~~~l~~~L~~L--Gi~~Gd~llVHsS 40 (268)
T 3ijw_A 13 LPNTIKTITNDLRKL--GLKKGMTVIVHSS 40 (268)
T ss_dssp SCBCHHHHHHHHHHH--TCCTTCEEEEEEC
T ss_pred CCcCHHHHHHHHHHc--CCCCCCEEEEEec
Confidence 346999999999988 5899999999976
No 37
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=51.29 E-value=8.9 Score=27.99 Aligned_cols=15 Identities=20% Similarity=0.317 Sum_probs=12.9
Q ss_pred HHHhhCCCCCEEEEE
Q 039205 20 WLMQGCQPGDSLVFH 34 (158)
Q Consensus 20 ~L~~~a~~gD~v~f~ 34 (158)
+.+.+.++||.++||
T Consensus 33 n~lr~Mk~GD~~~fY 47 (147)
T 2p5d_A 33 NTINKVKVGDKLIIY 47 (147)
T ss_dssp HHHTTCCTTCEEEEE
T ss_pred HHHHhCCCCCEEEEE
Confidence 456689999999999
No 38
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=49.65 E-value=16 Score=29.41 Aligned_cols=27 Identities=30% Similarity=0.258 Sum_probs=23.9
Q ss_pred cchHHHHHHHHHHHHhhCCCCCEEEEEec
Q 039205 8 WPTKYNMRMALCWLMQGCQPGDSLVFHFS 36 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~a~~gD~v~f~fS 36 (158)
.-|++.|+++|+.| ++++||+|++|=|
T Consensus 12 ~~T~~~L~~~L~~L--GI~~Gd~llVHsS 38 (273)
T 2nyg_A 12 PRTKQSITEDLKAL--GLKKGMTVLVHSS 38 (273)
T ss_dssp CBCHHHHHHHHHHH--TCCTTCEEEEEEC
T ss_pred CcCHHHHHHHHHHc--CCCCCCEEEEEec
Confidence 56899999999988 5899999999976
No 39
>3eop_A Thymocyte nuclear protein 1; unknown function, nucleus, phosphoprotein; 2.30A {Homo sapiens} SCOP: b.122.1.0
Probab=48.99 E-value=12 Score=28.50 Aligned_cols=18 Identities=17% Similarity=0.320 Sum_probs=14.3
Q ss_pred HHHhhCCCCCEEEEEecc
Q 039205 20 WLMQGCQPGDSLVFHFSG 37 (158)
Q Consensus 20 ~L~~~a~~gD~v~f~fSG 37 (158)
+++.+.+.||.+|||=|+
T Consensus 47 N~mR~Mk~GD~~fFYHSn 64 (176)
T 3eop_A 47 NFLRAMKLGEEAFFYHSN 64 (176)
T ss_dssp HHHHHCCTTCEEEEEECC
T ss_pred HHHHhcCCCCEEEEEecC
Confidence 344468899999999886
No 40
>2l6n_A Uncharacterized protein YP_001092504.1; PJ06155C, DUF971, structural genomics, PSI-biology, protein initiative; NMR {Shewanella loihica}
Probab=42.33 E-value=13 Score=26.67 Aligned_cols=35 Identities=9% Similarity=0.174 Sum_probs=29.3
Q ss_pred cCCCccchHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 039205 120 SNIPSIGAITYSFIQASELGHGTTYGRMLTSMRST 154 (158)
Q Consensus 120 ~~g~~~GafT~all~~L~~~~~~s~~~l~~~vr~~ 154 (158)
.+|...|.|++.+|+.|..+...-|++-++++++.
T Consensus 82 sDGH~SGiYs~~~L~~l~~~~~~~w~~yl~~l~~~ 116 (132)
T 2l6n_A 82 DDGHDTGLYSWKVLYDLASNQVDLWENYLARLRAA 116 (132)
T ss_dssp TTTBCCCCEEHHHHHHHHTTTTHHHHHHHHHHHHH
T ss_pred CCCCccCEECHHHHHHHhhhHHHHHHHHHHHHHHc
Confidence 45778899999999999988778888888887753
No 41
>2lxr_A NADH dehydrogenase I subunit E; HP1264, oxidoreductase; NMR {Helicobacter pylori}
Probab=42.11 E-value=17 Score=23.97 Aligned_cols=29 Identities=28% Similarity=0.381 Sum_probs=24.2
Q ss_pred cchHHHHHHHHHHHH-hhCCCCCEEEEEec
Q 039205 8 WPTKYNMRMALCWLM-QGCQPGDSLVFHFS 36 (158)
Q Consensus 8 ~aTr~nI~~al~~L~-~~a~~gD~v~f~fS 36 (158)
++-+++..+.|..++ +++++|.+++|.|=
T Consensus 7 RhLk~~f~~rm~ei~~~~~~~gEV~IFlFE 36 (76)
T 2lxr_A 7 RPLKAGIFERLEELIEKEMQPNEVAIFMFE 36 (76)
T ss_dssp GGGTTTTHHHHHHHHHTTSCTTCEEEEEEC
T ss_pred hhhHHHHHHHHHHHHHhccCCCcEEEEEEE
Confidence 455678889999988 58999999999985
No 42
>3pkz_A Recombinase SIN; small serine recombinase, resolvase, DNA, recombination; 1.80A {Staphylococcus aureus}
Probab=40.29 E-value=15 Score=25.32 Aligned_cols=19 Identities=16% Similarity=0.142 Sum_probs=15.5
Q ss_pred HHHHHHHhhCCCCCEEEEE
Q 039205 16 MALCWLMQGCQPGDSLVFH 34 (158)
Q Consensus 16 ~al~~L~~~a~~gD~v~f~ 34 (158)
.+|+.|++.+++||+|+++
T Consensus 44 p~l~~ll~~~~~gd~lvv~ 62 (124)
T 3pkz_A 44 PILQKALNFVEMGDRFIVE 62 (124)
T ss_dssp HHHHHHHHHCCTTCEEEES
T ss_pred HHHHHHHHHHHCCCEEEEe
Confidence 4788888889999988764
No 43
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=38.98 E-value=11 Score=27.15 Aligned_cols=13 Identities=23% Similarity=0.483 Sum_probs=10.7
Q ss_pred hhCCCCCEEEEEe
Q 039205 23 QGCQPGDSLVFHF 35 (158)
Q Consensus 23 ~~a~~gD~v~f~f 35 (158)
++++|||+|||.-
T Consensus 66 ~~l~pGDLvFf~~ 78 (135)
T 2k1g_A 66 SNLRTGDLVLFRA 78 (135)
T ss_dssp GGCCTTEEEEEEE
T ss_pred HHccCCcEEEECC
Confidence 5789999998854
No 44
>1x3l_A Hypothetical protein PH0495; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 2.10A {Pyrococcus horikoshii}
Probab=38.80 E-value=26 Score=30.35 Aligned_cols=36 Identities=17% Similarity=0.238 Sum_probs=27.5
Q ss_pred cchHHHHHHH--HHHHHhhCCCCCEEEEEeccCCCccc
Q 039205 8 WPTKYNMRMA--LCWLMQGCQPGDSLVFHFSGHASCII 43 (158)
Q Consensus 8 ~aTr~nI~~a--l~~L~~~a~~gD~v~f~fSGHG~~i~ 43 (158)
.|....+..+ +-.+++.+.++|.|++..||=|+.+|
T Consensus 100 vPD~~s~~Aa~~il~~~~~l~~~Dlvl~LISGGGSALl 137 (440)
T 1x3l_A 100 IPDEKSILGAKEALSILNRARENDIVFILISGGGSALF 137 (440)
T ss_dssp SCCHHHHHHHHHHHHHHHHCCTTSEEEEEECTTHHHHS
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCEEEEEecCcHHHhh
Confidence 4566655544 34778999999999999999999444
No 45
>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, C shape; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} PDB: 2xja_A*
Probab=38.74 E-value=19 Score=31.17 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhhCCCCCEEEEEeccCCC
Q 039205 13 NMRMALCWLMQGCQPGDSLVFHFSGHAS 40 (158)
Q Consensus 13 nI~~al~~L~~~a~~gD~v~f~fSGHG~ 40 (158)
+..++++++.+.+++||+|++-=|||=.
T Consensus 480 d~~~Ai~~a~~~a~~gD~VLv~GsGhe~ 507 (535)
T 2wtz_A 480 DRRDAIRHAVAWARPGDVVLIAGKGHET 507 (535)
T ss_dssp SHHHHHHHHHHHCCTTCEEEEESCTTCC
T ss_pred CHHHHHHHHHHhCCCCCEEEEEeCCCcc
Confidence 3456777788889999999999999865
No 46
>1cvr_A Gingipain R, RGPB; caspases, cysteine proteinase, hydrolase-hydrolase inhibitor; HET: H37; 2.00A {Porphyromonas gingivalis} SCOP: b.1.18.12 c.17.1.2
Probab=36.86 E-value=22 Score=30.38 Aligned_cols=24 Identities=25% Similarity=0.261 Sum_probs=15.7
Q ss_pred chHHHHHHHHHHHHhhCCCCCEEEEEeccCCC
Q 039205 9 PTKYNMRMALCWLMQGCQPGDSLVFHFSGHAS 40 (158)
Q Consensus 9 aTr~nI~~al~~L~~~a~~gD~v~f~fSGHG~ 40 (158)
+++++|.++++. ...++.|.|||+
T Consensus 190 ~~~~~I~~~ln~--------G~~ivnY~GHG~ 213 (435)
T 1cvr_A 190 VTPKNIIDAFNG--------GISLVNYTGHGS 213 (435)
T ss_dssp CCHHHHHHHHHH--------CCSEEEEESCBC
T ss_pred cCHHHHHHHHhC--------CCeEEEEecCCC
Confidence 445666655542 336777889999
No 47
>2b8n_A Glycerate kinase, putative; TM1585, glycerate kinase (EC 2.7.1.31), structural genomics, center for structural genomics, JCSG; 2.53A {Thermotoga maritima} SCOP: c.118.1.1
Probab=36.41 E-value=27 Score=30.08 Aligned_cols=36 Identities=19% Similarity=0.390 Sum_probs=27.3
Q ss_pred cchHHHHHHH--HHHHHhhCCCCCEEEEEeccCCCccc
Q 039205 8 WPTKYNMRMA--LCWLMQGCQPGDSLVFHFSGHASCII 43 (158)
Q Consensus 8 ~aTr~nI~~a--l~~L~~~a~~gD~v~f~fSGHG~~i~ 43 (158)
.|....+..+ +-.+++.+.++|.|++.-||=|+.+|
T Consensus 104 vPD~~s~~Aa~~il~l~~~l~~~Dlvl~LISGGGSALl 141 (429)
T 2b8n_A 104 VPDENTIKTTRRVLELVDQLNENDTVLFLLSGGGSSLF 141 (429)
T ss_dssp SCCHHHHHHHHHHHHHHSSCCTTCEEEEEECTTHHHHS
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCEEEEEecCcHHHHh
Confidence 4566655544 34778999999999999999999433
No 48
>2gm5_A Transposon gamma-delta resolvase; site specific recombination, recombin; 2.10A {Escherichia coli} PDB: 2rsl_A 1gdr_A 1ght_A 1hx7_A
Probab=35.14 E-value=20 Score=25.27 Aligned_cols=20 Identities=25% Similarity=0.346 Sum_probs=16.3
Q ss_pred HHHHHHHHhhCCCCCEEEEE
Q 039205 15 RMALCWLMQGCQPGDSLVFH 34 (158)
Q Consensus 15 ~~al~~L~~~a~~gD~v~f~ 34 (158)
..+|+.|++.+++||.|+++
T Consensus 44 Rp~l~~ll~~~~~gd~lvV~ 63 (139)
T 2gm5_A 44 RKGLDLLRMKVKEGDVILVK 63 (139)
T ss_dssp CHHHHHHHHHCCTTCEEEES
T ss_pred cHHHHHHHHHHHCCCEEEEE
Confidence 46788999999999977664
No 49
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=33.90 E-value=35 Score=25.23 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=29.8
Q ss_pred chHHHHHHHHHHHHh------hCCCCCEEEEEeccCCCcccccCCCCCcCC
Q 039205 9 PTKYNMRMALCWLMQ------GCQPGDSLVFHFSGHASCIIDACHSGTMLD 53 (158)
Q Consensus 9 aTr~nI~~al~~L~~------~a~~gD~v~f~fSGHG~~i~DcCHSG~~~r 53 (158)
=|++.|++|-++|++ +.+|.|++-++||- +-=+|+|+=+.+.|
T Consensus 44 Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTv--T~DL~A~FPA~aaR 92 (148)
T 1xho_A 44 NTADEIVAETQKLLKEMAEKNGLEEDDIISIIFTV--TKDLDAAFPAIAAR 92 (148)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE--CTTCCSSCTHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEe--CCccCccChHHHHH
Confidence 478888888777753 57899999999982 22255666554444
No 50
>3kw0_A Cysteine peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: LYS; 2.50A {Bacillus cereus}
Probab=32.72 E-value=22 Score=27.31 Aligned_cols=22 Identities=23% Similarity=0.232 Sum_probs=16.6
Q ss_pred HHHHHHhhCCCCCEEEEEeccCCC
Q 039205 17 ALCWLMQGCQPGDSLVFHFSGHAS 40 (158)
Q Consensus 17 al~~L~~~a~~gD~v~f~fSGHG~ 40 (158)
.++.+.++++|||+|+| +|.+.
T Consensus 32 ~~~~~~~~l~~GDlif~--~~~~~ 53 (214)
T 3kw0_A 32 KYENLINVLKTGDIFLC--SGNYL 53 (214)
T ss_dssp CHHHHTTTCCTTCEEEE--EECSH
T ss_pred CHHHHHhhCCCCCEEEE--eCCCc
Confidence 35567789999999988 56553
No 51
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=31.68 E-value=22 Score=23.35 Aligned_cols=24 Identities=25% Similarity=0.494 Sum_probs=17.4
Q ss_pred hCCCCCEEEEEeccC--CCcccccCC
Q 039205 24 GCQPGDSLVFHFSGH--ASCIIDACH 47 (158)
Q Consensus 24 ~a~~gD~v~f~fSGH--G~~i~DcCH 47 (158)
.++.||.|.++|.|. ..-+||.-.
T Consensus 5 ~~~~gd~V~v~y~~~~~dG~~~d~s~ 30 (102)
T 2pbc_A 5 KSRKGDVLHMHYTGKLEDGTEFDSSL 30 (102)
T ss_dssp CCCTTCEEEEEEEEECTTSCEEEEST
T ss_pred cCCCCCEEEEEEEEEECCCCEEEeCC
Confidence 367899999999986 224566554
No 52
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=31.48 E-value=40 Score=24.31 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=30.0
Q ss_pred chHHHHHHHHHHHHh------hCCCCCEEEEEeccCCCcccccCCCCCcCC
Q 039205 9 PTKYNMRMALCWLMQ------GCQPGDSLVFHFSGHASCIIDACHSGTMLD 53 (158)
Q Consensus 9 aTr~nI~~al~~L~~------~a~~gD~v~f~fSGHG~~i~DcCHSG~~~r 53 (158)
=|++.|++|-++|++ +.++.|++-++||-= -=+|+|+=+...|
T Consensus 15 Nt~e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T--~DL~a~FPA~aaR 63 (127)
T 1dbf_A 15 DTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT--PDLHAVFPAKAVR 63 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEC--TTCCSSCTHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC--CccCccChHHHHh
Confidence 367888888777753 578999999999932 2255666555544
No 53
>1gdt_A GD resolvase, protein (gamma delta resolvase); protein-DNA complex, double helix, overhanging base, DNA binding protein/DNA complex; 3.00A {Escherichia coli} SCOP: a.4.1.2 c.53.1.1 PDB: 1zr4_A 1zr2_A 2gm4_A 1res_A 1ret_A
Probab=30.90 E-value=25 Score=25.63 Aligned_cols=19 Identities=21% Similarity=0.286 Sum_probs=15.7
Q ss_pred HHHHHHHhhCCCCCEEEEE
Q 039205 16 MALCWLMQGCQPGDSLVFH 34 (158)
Q Consensus 16 ~al~~L~~~a~~gD~v~f~ 34 (158)
.+|+.|++.+++||+|+++
T Consensus 46 p~l~~ll~~~~~gd~lvv~ 64 (183)
T 1gdt_A 46 KGLDLLRMKVEEGDVILVK 64 (183)
T ss_dssp HHHHHHHHHCCTTCEEEES
T ss_pred HHHHHHHhcCCCCCEEEEE
Confidence 5788899999999977765
No 54
>3epz_A DNA (cytosine-5)-methyltransferase 1; winged helix domain, SH3-like barrel, cell cycle, metal BIND binding,DNA replication; HET: DNA BGC; 2.31A {Homo sapiens}
Probab=30.79 E-value=33 Score=27.76 Aligned_cols=29 Identities=14% Similarity=0.308 Sum_probs=24.4
Q ss_pred hHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 039205 127 AITYSFIQASELGHGTTYGRMLTSMRSTI 155 (158)
Q Consensus 127 afT~all~~L~~~~~~s~~~l~~~vr~~v 155 (158)
-++..+++.|.++|.+||.+|+.+|...|
T Consensus 175 ~~s~~Vie~L~~~p~~syedLL~~v~~s~ 203 (268)
T 3epz_A 175 YISKIVVEFLQSNSDSTYEDLINKIETTV 203 (268)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHHHHCB
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHccC
Confidence 45667888898999999999999997654
No 55
>4dot_A Group XVI phospholipase A2; alpha/beta fold, phospholipase/acyltransferase, phosphatidyl phosphatidylethanolamine, membrane, hydrolase; 1.96A {Homo sapiens}
Probab=30.25 E-value=24 Score=25.65 Aligned_cols=14 Identities=21% Similarity=0.316 Sum_probs=11.5
Q ss_pred hhCCCCCEEEEEec
Q 039205 23 QGCQPGDSLVFHFS 36 (158)
Q Consensus 23 ~~a~~gD~v~f~fS 36 (158)
++++|||.|+|+..
T Consensus 6 ~~~~pGDlv~~~~~ 19 (140)
T 4dot_A 6 PEPKPGDLIEIFRP 19 (140)
T ss_dssp CCCCTTCEEEEEET
T ss_pred cCCCCCCEEEEeCC
Confidence 56899999998753
No 56
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=28.90 E-value=57 Score=23.30 Aligned_cols=42 Identities=14% Similarity=0.055 Sum_probs=28.5
Q ss_pred chHHHHHHHHHHHHh------hCCC-CCEEEEEeccCCCcccccCCCCCcC
Q 039205 9 PTKYNMRMALCWLMQ------GCQP-GDSLVFHFSGHASCIIDACHSGTML 52 (158)
Q Consensus 9 aTr~nI~~al~~L~~------~a~~-gD~v~f~fSGHG~~i~DcCHSG~~~ 52 (158)
=|++.|+++-++|++ +.++ .|++-++||-= -=+|+|+=+...
T Consensus 14 n~~e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T--~DL~a~FPA~aa 62 (122)
T 1ufy_A 14 DTPEAIHQATRELLLKMLEANGIQSYEELAAVIFTVT--EDLTSAFPAEAA 62 (122)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEEC--TTCCSCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeC--CccCccChHHHH
Confidence 367888888777753 5789 99999999822 124555544433
No 57
>2jyx_A Lipoprotein SPR; solution structure, construct optimized, membrane, palmitate, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} PDB: 2k1g_A
Probab=28.89 E-value=19 Score=25.54 Aligned_cols=14 Identities=21% Similarity=0.458 Sum_probs=11.2
Q ss_pred hhCCCCCEEEEEec
Q 039205 23 QGCQPGDSLVFHFS 36 (158)
Q Consensus 23 ~~a~~gD~v~f~fS 36 (158)
++++|||+|||...
T Consensus 66 ~~l~pGDLvff~~~ 79 (136)
T 2jyx_A 66 SNLRTGDLVLFRAG 79 (136)
T ss_dssp TTCCTTEEEEEECS
T ss_pred HhCCCCCEEEECCC
Confidence 47899999998654
No 58
>2r0q_C Putative transposon TN552 DNA-invertase BIN3; site-specific recombinase, resolvase, DNA-binding protein, protein-DNA complex, DNA integration, DNA invertase, DNA recombination; 3.20A {Staphylococcus aureus}
Probab=28.74 E-value=28 Score=25.97 Aligned_cols=21 Identities=19% Similarity=0.156 Sum_probs=17.3
Q ss_pred HHHHHHHHhhCCCCCEEEEEe
Q 039205 15 RMALCWLMQGCQPGDSLVFHF 35 (158)
Q Consensus 15 ~~al~~L~~~a~~gD~v~f~f 35 (158)
..+|+.|++.+++||+|+++=
T Consensus 43 Rp~l~~ll~~~~~gd~lvv~~ 63 (209)
T 2r0q_C 43 RPILQKALNFVRMGDRFIVES 63 (209)
T ss_dssp CHHHHHHHHHCCTTCEEEESS
T ss_pred CHHHHHHHHHhhCCCEEEEee
Confidence 467889999999999887753
No 59
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=28.71 E-value=36 Score=22.77 Aligned_cols=29 Identities=14% Similarity=0.228 Sum_probs=21.6
Q ss_pred HHHHHHH--hhCCCCCEEEEEeccCCC---cccc
Q 039205 16 MALCWLM--QGCQPGDSLVFHFSGHAS---CIID 44 (158)
Q Consensus 16 ~al~~L~--~~a~~gD~v~f~fSGHG~---~i~D 44 (158)
..|+.++ ..++.||.++|.|.|... .|||
T Consensus 67 ~GW~~Fv~~~~L~~GD~lvF~~~~~~~f~V~If~ 100 (104)
T 1yel_A 67 VGWENFVKDNNLEDGKYLQFIYDRDRTFYVIIYG 100 (104)
T ss_dssp TTHHHHHHHHTCCTTCEEEEEECSSSEEEEEEEC
T ss_pred cChHHHHHHcCCCCCCEEEEEEcCCCeEEEEEEC
Confidence 4466665 468999999999998765 5555
No 60
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=28.19 E-value=26 Score=24.97 Aligned_cols=12 Identities=25% Similarity=0.526 Sum_probs=9.9
Q ss_pred hhCCCCCEEEEE
Q 039205 23 QGCQPGDSLVFH 34 (158)
Q Consensus 23 ~~a~~gD~v~f~ 34 (158)
++++|||+|||.
T Consensus 88 ~~~~pGDlvff~ 99 (142)
T 3gt2_A 88 QQARKGDLIFYG 99 (142)
T ss_dssp GGCCTTCEEEES
T ss_pred hhCCCCCEEEeC
Confidence 578999999774
No 61
>4dpz_X HRAS-like suppressor 2; alpha/beta fold, enzyme phospholipid acyltransferase, hydrol transferase; 1.25A {Homo sapiens} PDB: 4fa0_A 2kyt_A
Probab=28.00 E-value=25 Score=25.47 Aligned_cols=14 Identities=14% Similarity=-0.002 Sum_probs=11.2
Q ss_pred hhCCCCCEEEEEec
Q 039205 23 QGCQPGDSLVFHFS 36 (158)
Q Consensus 23 ~~a~~gD~v~f~fS 36 (158)
++.+|||.|+|+..
T Consensus 6 ~~~~pGDlv~~~~~ 19 (137)
T 4dpz_X 6 PRPRLGDLIEISRF 19 (137)
T ss_dssp CCCCTTCEEEEECS
T ss_pred ccCCCCCEEEEeCC
Confidence 46899999998743
No 62
>3pbi_A Invasion protein; peptidoglycan hydrolase, extracellular, invasion related Pro cell WALL, NLPC-like module, hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 3i86_A
Probab=25.85 E-value=38 Score=26.23 Aligned_cols=11 Identities=18% Similarity=0.525 Sum_probs=9.4
Q ss_pred hhCCCCCEEEE
Q 039205 23 QGCQPGDSLVF 33 (158)
Q Consensus 23 ~~a~~gD~v~f 33 (158)
++++|||+|||
T Consensus 157 ~~lqpGDLVff 167 (214)
T 3pbi_A 157 AEAKRGDLIFY 167 (214)
T ss_dssp GGCCTTCEEEE
T ss_pred hhCCCCCEEEe
Confidence 57899999886
No 63
>3ne0_A Resuscitation promoting factor interacting protei; cell WALL, peptidoglycan, hydrolase; 1.00A {Mycobacterium tuberculosis} PDB: 3pbc_A 3s0q_A 2xiv_A*
Probab=25.40 E-value=39 Score=26.20 Aligned_cols=11 Identities=18% Similarity=0.522 Sum_probs=9.6
Q ss_pred hhCCCCCEEEE
Q 039205 23 QGCQPGDSLVF 33 (158)
Q Consensus 23 ~~a~~gD~v~f 33 (158)
++++|||+|||
T Consensus 157 ~~lqpGDLvFf 167 (214)
T 3ne0_A 157 SQMRRGDVIFY 167 (214)
T ss_dssp GGCCTTCEEEE
T ss_pred hhCCCCCEEEe
Confidence 67899999986
No 64
>1pqs_A Cell division control protein 24; alpha and beta protein, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1tz1_A
Probab=25.18 E-value=34 Score=22.32 Aligned_cols=18 Identities=11% Similarity=0.219 Sum_probs=15.9
Q ss_pred CCCCCHHHHHHHHHHHHh
Q 039205 139 GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 139 ~~~~s~~~l~~~vr~~v~ 156 (158)
.+.++|.+|+++|+.+++
T Consensus 9 ~~~i~f~~L~~kI~~kl~ 26 (77)
T 1pqs_A 9 EKVWNFDDLIMAINSKIS 26 (77)
T ss_dssp TTCCCSHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHc
Confidence 467999999999999886
No 65
>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.00A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1
Probab=25.05 E-value=44 Score=28.41 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhhCCCCCEEEEEeccCCC
Q 039205 13 NMRMALCWLMQGCQPGDSLVFHFSGHAS 40 (158)
Q Consensus 13 nI~~al~~L~~~a~~gD~v~f~fSGHG~ 40 (158)
+..++++++.+.+++||+|++-=+||=.
T Consensus 442 ~~~~ai~~a~~~a~~gd~VLv~GkG~~~ 469 (498)
T 1e8c_A 442 GRAEAVTCAVMQAKENDVVLVAGKGHED 469 (498)
T ss_dssp CHHHHHHHHHHHSCTTCEEEEESCTTCC
T ss_pred CHHHHHHHHHHhCCCCCEEEEecCCCcc
Confidence 3456777788889999999887677754
No 66
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=24.82 E-value=38 Score=23.30 Aligned_cols=23 Identities=17% Similarity=0.431 Sum_probs=16.4
Q ss_pred hCCCCCEEEEEeccC---CCcccccC
Q 039205 24 GCQPGDSLVFHFSGH---ASCIIDAC 46 (158)
Q Consensus 24 ~a~~gD~v~f~fSGH---G~~i~DcC 46 (158)
.++.||.|.++|.|. ..-+||.-
T Consensus 33 ~~~~gd~V~v~Y~g~~~~dG~~fd~s 58 (129)
T 2vn1_A 33 IPKKGNEVTVHYVGKLESTGKVFDSS 58 (129)
T ss_dssp SCCTTCEEEEEEEEEETTTCCEEEEG
T ss_pred cCCCCCEEEEEEEEEECCCCeEEEec
Confidence 357899999999985 22456654
No 67
>2l6p_A PHAC1, PHAC2 and PHAD genes; DUF971, structural genomics, PSI-biology, protein structure initiative, joint center for structural genomics; NMR {Pseudomonas aeruginosa}
Probab=24.29 E-value=20 Score=25.38 Aligned_cols=34 Identities=12% Similarity=0.235 Sum_probs=25.6
Q ss_pred cCCCccchHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 039205 120 SNIPSIGAITYSFIQASELGHGTTYGRMLTSMRS 153 (158)
Q Consensus 120 ~~g~~~GafT~all~~L~~~~~~s~~~l~~~vr~ 153 (158)
.+|...|.|++.+|..|..+...-|++-++++.+
T Consensus 75 sDGH~sgiY~~~~L~~l~~~~~~~~~~y~~~l~~ 108 (124)
T 2l6p_A 75 DDGHDSGLFTWDYLYELATRKDQLWADYLAELAS 108 (124)
T ss_dssp TTSCCCCCCTTHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCCcceEECHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3465689999999999987666677777776654
No 68
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=23.46 E-value=17 Score=23.17 Aligned_cols=21 Identities=19% Similarity=0.210 Sum_probs=16.2
Q ss_pred cchHHHHHHHHHHHHhhCCCC
Q 039205 8 WPTKYNMRMALCWLMQGCQPG 28 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~a~~g 28 (158)
++|-.||-+|++||+.+..|.
T Consensus 41 Kat~~NvErAaDWLFSH~D~~ 61 (63)
T 1wgn_A 41 KKKGENIEQILDYLFAHSGPS 61 (63)
T ss_dssp HHHCSCHHHHHHHHHHHSCCC
T ss_pred HHcCCCHHHHHHHHHhCCCCC
Confidence 345568999999999887663
No 69
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=23.08 E-value=42 Score=22.05 Aligned_cols=14 Identities=29% Similarity=0.629 Sum_probs=12.4
Q ss_pred CCCCCEEEEEeccC
Q 039205 25 CQPGDSLVFHFSGH 38 (158)
Q Consensus 25 a~~gD~v~f~fSGH 38 (158)
+++||.|.++|.|.
T Consensus 16 ~~~gd~V~v~y~~~ 29 (107)
T 2ppn_A 16 PKRGQTCVVHYTGM 29 (107)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred CCCCCEEEEEEEEE
Confidence 67899999999975
No 70
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=23.06 E-value=38 Score=23.12 Aligned_cols=23 Identities=17% Similarity=0.478 Sum_probs=16.7
Q ss_pred hCCCCCEEEEEeccC---CCcccccC
Q 039205 24 GCQPGDSLVFHFSGH---ASCIIDAC 46 (158)
Q Consensus 24 ~a~~gD~v~f~fSGH---G~~i~DcC 46 (158)
.++.||.|.+||.|. ...+||.-
T Consensus 28 ~~~~gd~V~v~Y~g~~~~dG~~fdss 53 (125)
T 4dip_A 28 KTKGGDLMLVHYEGYLEKDGSLFHST 53 (125)
T ss_dssp CCCTTCEEEEEEEEEETTTCCEEEEH
T ss_pred cCCCCCEEEEEEEEEECCCCcEEEEc
Confidence 367899999999986 22455654
No 71
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=22.94 E-value=59 Score=27.14 Aligned_cols=31 Identities=19% Similarity=0.199 Sum_probs=21.0
Q ss_pred cchHHHHHHHHHHHHhh----------CCCCCEEEEEeccC
Q 039205 8 WPTKYNMRMALCWLMQG----------CQPGDSLVFHFSGH 38 (158)
Q Consensus 8 ~aTr~nI~~al~~L~~~----------a~~gD~v~f~fSGH 38 (158)
..|-+.|-+.|+.|.++ ++.||.|.++|.|-
T Consensus 134 ~Vtde~Vd~~l~~l~~~~a~~~~~~~~~~~gD~V~i~y~g~ 174 (392)
T 1t11_A 134 EVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 174 (392)
T ss_dssp ---CTHHHHHHHHHHHHHCEEEECSCCCCTTCEEEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHhcCeeeecCCCCCCCCEEEEEEEEE
Confidence 34555666666666543 67899999999985
No 72
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=22.35 E-value=1.1e+02 Score=24.30 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=25.5
Q ss_pred CCCcchHH-HHHHHHHHHHh---hCCCCCEE-EEEeccCCC
Q 039205 5 PLKWPTKY-NMRMALCWLMQ---GCQPGDSL-VFHFSGHAS 40 (158)
Q Consensus 5 ~~~~aTr~-nI~~al~~L~~---~a~~gD~v-~f~fSGHG~ 40 (158)
.+..|||- ...+|++.|++ +..|+|.| ++-|+|...
T Consensus 19 ~D~~PsRl~a~k~Av~~li~~~~~~nPed~VGLVtfag~~~ 59 (268)
T 4b4t_W 19 GDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANP 59 (268)
T ss_dssp TTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSC
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhhCCCcceEEEEEecCCcc
Confidence 34678874 44567777765 56789987 677998876
No 73
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=21.93 E-value=45 Score=22.40 Aligned_cols=24 Identities=17% Similarity=0.328 Sum_probs=17.7
Q ss_pred CCCCCEEEEEeccCC--CcccccCCC
Q 039205 25 CQPGDSLVFHFSGHA--SCIIDACHS 48 (158)
Q Consensus 25 a~~gD~v~f~fSGHG--~~i~DcCHS 48 (158)
.++||.|.+||.|.= .-+||+-..
T Consensus 20 p~~gd~V~v~Y~g~~~dG~~fdss~~ 45 (119)
T 3kz7_A 20 PKKGDVVHCWYTGTLPDGTVFDTNIQ 45 (119)
T ss_dssp CCTTCEEEEEEEEECTTSCEEEECCC
T ss_pred CCCCCEEEEEEEEEECCCCEEEeccc
Confidence 578999999999852 256776544
No 74
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=21.58 E-value=31 Score=22.45 Aligned_cols=15 Identities=40% Similarity=0.747 Sum_probs=12.0
Q ss_pred HHhhCCCCCEEEEEe
Q 039205 21 LMQGCQPGDSLVFHF 35 (158)
Q Consensus 21 L~~~a~~gD~v~f~f 35 (158)
|+..+++||.|++|-
T Consensus 32 Lv~~~~vGD~VLVH~ 46 (75)
T 2z1c_A 32 LMPDTKPGDWVIVHT 46 (75)
T ss_dssp TSTTCCTTCEEEEET
T ss_pred EeCCCCCCCEEEEec
Confidence 456788999999984
No 75
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=21.23 E-value=40 Score=24.96 Aligned_cols=23 Identities=22% Similarity=0.460 Sum_probs=17.1
Q ss_pred CCCCCEEEEEeccCC----CcccccCC
Q 039205 25 CQPGDSLVFHFSGHA----SCIIDACH 47 (158)
Q Consensus 25 a~~gD~v~f~fSGHG----~~i~DcCH 47 (158)
+++||.|.+||.|-= ..+||+-.
T Consensus 27 ~~~G~~V~vhY~g~l~d~~G~~FDsS~ 53 (165)
T 2lkn_A 27 FQDGTKATFHYRTLHSDDEGTVLDDSR 53 (165)
T ss_dssp CCTTCEEEEECEEECSSSSCCEEEEST
T ss_pred CCCCCEEEEEEEEEEeCCCccEEEecc
Confidence 457999999999852 25788754
No 76
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=21.17 E-value=37 Score=23.21 Aligned_cols=23 Identities=17% Similarity=0.317 Sum_probs=16.5
Q ss_pred hCCCCCEEEEEeccC-CCcccccC
Q 039205 24 GCQPGDSLVFHFSGH-ASCIIDAC 46 (158)
Q Consensus 24 ~a~~gD~v~f~fSGH-G~~i~DcC 46 (158)
.+++||.|.++|.|- ...+||.-
T Consensus 29 ~~~~gD~V~v~Y~g~~dG~~fdss 52 (113)
T 1hxv_A 29 KLANGDIAIIDFTGIVDNKKLASA 52 (113)
T ss_dssp CCCSSEEEEEEEEEEETTEECSTT
T ss_pred CCCCCCEEEEEEEEEECCEEcccC
Confidence 578999999999975 11345554
No 77
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=21.12 E-value=43 Score=22.61 Aligned_cols=22 Identities=9% Similarity=0.158 Sum_probs=15.9
Q ss_pred hCCCCCEEEEEeccC--CCccccc
Q 039205 24 GCQPGDSLVFHFSGH--ASCIIDA 45 (158)
Q Consensus 24 ~a~~gD~v~f~fSGH--G~~i~Dc 45 (158)
.++.||.|.++|.|. ..-+||.
T Consensus 29 ~~~~gd~V~v~y~g~~~dG~~~ds 52 (118)
T 2awg_A 29 RPVKGQVVTVHLQTSLENGTRVQE 52 (118)
T ss_dssp CCCTTSEEEEEEEEECTTSCEEEE
T ss_pred cCCCCCEEEEEEEEEECCCCEEEC
Confidence 367899999999985 2245664
No 78
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=21.06 E-value=41 Score=22.34 Aligned_cols=27 Identities=26% Similarity=0.465 Sum_probs=19.3
Q ss_pred hCCCCCEEEEEecc--CCC-----cccccCCCCC
Q 039205 24 GCQPGDSLVFHFSG--HAS-----CIIDACHSGT 50 (158)
Q Consensus 24 ~a~~gD~v~f~fSG--HG~-----~i~DcCHSG~ 50 (158)
..+.||.|+|.|.- |-. .=+|.|....
T Consensus 18 ~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~ 51 (91)
T 1f56_A 18 SFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPR 51 (91)
T ss_dssp CBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCT
T ss_pred cEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCC
Confidence 46889999999973 544 2248997654
No 79
>3uj3_X DNA-invertase; helix-turn-helix, site-specific recombinase, recombination; 3.51A {Enterobacteria phage MU} PDB: 3plo_X
Probab=20.99 E-value=28 Score=25.63 Aligned_cols=19 Identities=32% Similarity=0.335 Sum_probs=15.9
Q ss_pred HHHHHHhhCCCCCEEEEEe
Q 039205 17 ALCWLMQGCQPGDSLVFHF 35 (158)
Q Consensus 17 al~~L~~~a~~gD~v~f~f 35 (158)
+|+.|++.+++||+|+++-
T Consensus 44 ~l~~ll~~~~~gd~lvv~~ 62 (193)
T 3uj3_X 44 GLKRALKRLQKGDTLVVWK 62 (193)
T ss_dssp TTHHHHHTCCTTCCEEESC
T ss_pred HHHHHHHHccCCCEEEEEE
Confidence 6788889999999988764
No 80
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=20.75 E-value=50 Score=22.01 Aligned_cols=23 Identities=22% Similarity=0.434 Sum_probs=16.8
Q ss_pred CCCCCEEEEEeccC--CCcccccCC
Q 039205 25 CQPGDSLVFHFSGH--ASCIIDACH 47 (158)
Q Consensus 25 a~~gD~v~f~fSGH--G~~i~DcCH 47 (158)
+++||.|.++|.|. ...+||.-.
T Consensus 22 ~~~gd~V~v~y~~~~~dG~~~d~s~ 46 (113)
T 1yat_A 22 PKTGDLVTIHYTGTLENGQKFDSSV 46 (113)
T ss_dssp CCTTCEEEEEEEEEETTSCEEEEST
T ss_pred CCCCCEEEEEEEEEECCCCEEEecC
Confidence 67899999999986 124566544
No 81
>4dol_A AT1G53520, 94270-95700, chalcon; chalcone-isomerase like fold, fatty-acid binding, isomerase; HET: PLM; 1.70A {Arabidopsis thaliana}
Probab=20.49 E-value=83 Score=23.86 Aligned_cols=28 Identities=11% Similarity=0.338 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhh--CCCCCEEEEEeccC
Q 039205 11 KYNMRMALCWLMQG--CQPGDSLVFHFSGH 38 (158)
Q Consensus 11 r~nI~~al~~L~~~--a~~gD~v~f~fSGH 38 (158)
-+.-++.|..+..+ +++||.+.|.|+.-
T Consensus 132 ~~~~l~~f~~~F~d~~v~kGd~i~~~~~p~ 161 (217)
T 4dol_A 132 DTTALSTFCCIFQNRPLNKGSVILLTWINT 161 (217)
T ss_dssp HHHHHHHHHHHHTTCCBCTTCEEEEEEEET
T ss_pred HHHHHHHHHHHhCCCcCCCCCEEEEEEcCC
Confidence 34455667777777 99999999999843
No 82
>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B
Probab=20.28 E-value=76 Score=21.71 Aligned_cols=18 Identities=11% Similarity=0.219 Sum_probs=16.0
Q ss_pred CCCCCHHHHHHHHHHHHh
Q 039205 139 GHGTTYGRMLTSMRSTIY 156 (158)
Q Consensus 139 ~~~~s~~~l~~~vr~~v~ 156 (158)
.+.++|.+|+++|+.+++
T Consensus 30 ~~~i~f~~L~~kI~~Kl~ 47 (98)
T 1q1o_A 30 EKVWNFDDLIMAINSKIS 47 (98)
T ss_dssp CTTCCHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHc
Confidence 467999999999999886
No 83
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=20.17 E-value=40 Score=24.41 Aligned_cols=13 Identities=31% Similarity=0.345 Sum_probs=11.4
Q ss_pred CCEEEEEeccCCC
Q 039205 28 GDSLVFHFSGHAS 40 (158)
Q Consensus 28 gD~v~f~fSGHG~ 40 (158)
--++++|||.+|.
T Consensus 14 mkilIvY~S~tGn 26 (171)
T 4ici_A 14 SKILVAYFSATGT 26 (171)
T ss_dssp CCEEEEECCSSSH
T ss_pred CCEEEEEECCCCh
Confidence 3589999999999
No 84
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=20.16 E-value=96 Score=24.77 Aligned_cols=33 Identities=9% Similarity=0.000 Sum_probs=28.1
Q ss_pred CCcchHHHHHHHHHHHHhhCCCCCEEEEEeccCCC
Q 039205 6 LKWPTKYNMRMALCWLMQGCQPGDSLVFHFSGHAS 40 (158)
Q Consensus 6 ~~~aTr~nI~~al~~L~~~a~~gD~v~f~fSGHG~ 40 (158)
..+|+-..+.+.|+.+.++- .+++++++|..=+
T Consensus 65 TSqps~~~~~~~f~~l~~~g--~~ii~i~iSs~LS 97 (297)
T 3nyi_A 65 TSLPSVESYADVFRSFVEQG--FPVVCFTITTLFS 97 (297)
T ss_dssp EECCCHHHHHHHHHHHHTTT--CCEEEEESCTTTC
T ss_pred ecCCCHHHHHHHHHHHHHCC--CeEEEEECCCcHh
Confidence 56899999999999998663 6899999998766
Done!