BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039213
ARESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVG
NYDRYILIDAGDPGFGFQYTNICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVT
LVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVIL

High Scoring Gene Products

Symbol, full name Information P value
emb2746
AT5G63420
protein from Arabidopsis thaliana 2.1e-36
CHY_1157
metallo-beta-lactamase family protein
protein from Carboxydothermus hydrogenoformans Z-2901 2.7e-06
NSE_0829
metallo-beta-lactamase family, beta-CASP subfamily
protein from Neorickettsia sennetsu str. Miyayama 9.8e-06
DET_0438
metallo-beta-lactamase family protein
protein from Dehalococcoides ethenogenes 195 2.4e-05
GSU3113
Metal-dependent hydrolase, beta-lactamase superfamily
protein from Geobacter sulfurreducens PCA 0.00089
GSU_3113
metallo-beta-lactamase family protein
protein from Geobacter sulfurreducens PCA 0.00089

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039213
        (156 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2167336 - symbol:emb2746 "embryo defective 274...   267  2.1e-36   2
TIGR_CMR|CHY_1157 - symbol:CHY_1157 "metallo-beta-lactama...    92  2.7e-06   2
TIGR_CMR|NSE_0829 - symbol:NSE_0829 "metallo-beta-lactama...    89  9.8e-06   2
TIGR_CMR|DET_0438 - symbol:DET_0438 "metallo-beta-lactama...    89  2.4e-05   3
UNIPROTKB|Q748A2 - symbol:GSU3113 "Metal-dependent hydrol...    82  0.00089   2
TIGR_CMR|GSU_3113 - symbol:GSU_3113 "metallo-beta-lactama...    82  0.00089   2


>TAIR|locus:2167336 [details] [associations]
            symbol:emb2746 "embryo defective 2746" species:3702
            "Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] [GO:0009793 "embryo development
            ending in seed dormancy" evidence=NAS] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0015979 "photosynthesis" evidence=RCA] [GO:0045333 "cellular
            respiration" evidence=RCA] InterPro:IPR001005 InterPro:IPR001279
            InterPro:IPR004613 InterPro:IPR009057 Pfam:PF00753 SMART:SM00717
            SMART:SM00849 Pfam:PF07521 EMBL:CP002688 GO:GO:0009507
            GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016787
            InterPro:IPR017877 PROSITE:PS50090 InterPro:IPR011108
            PANTHER:PTHR11203:SF22 EMBL:BT004210 EMBL:AK221272 IPI:IPI00544432
            RefSeq:NP_201147.2 UniGene:At.28999 ProteinModelPortal:Q84W56
            SMR:Q84W56 STRING:Q84W56 PRIDE:Q84W56 EnsemblPlants:AT5G63420.1
            GeneID:836461 KEGG:ath:AT5G63420 TAIR:At5g63420 InParanoid:Q84W56
            OMA:GSSHAFK PhylomeDB:Q84W56 ProtClustDB:CLSN2681121
            Genevestigator:Q84W56 Uniprot:Q84W56
        Length = 911

 Score = 267 (99.0 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
 Identities = 49/53 (92%), Positives = 53/53 (100%)

Query:    19 KSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
             KSMEDSV+RKMEQFYEG++GPPLR+LPIGGLGEIGMNCMLVGNYDRYILIDAG
Sbjct:    88 KSMEDSVKRKMEQFYEGTDGPPLRILPIGGLGEIGMNCMLVGNYDRYILIDAG 140

 Score = 164 (62.8 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
 Identities = 37/59 (62%), Positives = 45/59 (76%)

Query:   100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
             P+ G++   +  E L K  G+  T VIKNGEMLGVSHLRNRRVLSNGF SLG+ENLQ++
Sbjct:   492 PIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFSSLGRENLQLM 550

 Score = 132 (51.5 bits), Expect = 4.8e-33, Sum P(2) = 4.8e-33
 Identities = 27/52 (51%), Positives = 39/52 (75%)

Query:    95 QIDESPLDGKVFDREALEELSKEGVTLVIKNG-EMLGVSHLRNRRVLSNGFI 145
             +IDE+PLDGKVFDREALEELSKEGVTL++ +   +L      + +V+++  +
Sbjct:   269 KIDEAPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTISEKVVADALV 320


>TIGR_CMR|CHY_1157 [details] [associations]
            symbol:CHY_1157 "metallo-beta-lactamase family protein"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001279
            InterPro:IPR004613 Pfam:PF00753 PIRSF:PIRSF004803 SMART:SM00849
            Pfam:PF07521 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
            GO:GO:0003723 GO:GO:0016788 InterPro:IPR011108 eggNOG:COG0595
            HOGENOM:HOG000280201 KO:K12574 PANTHER:PTHR11203:SF22
            TIGRFAMs:TIGR00649 RefSeq:YP_360002.1 ProteinModelPortal:Q3ACY2
            STRING:Q3ACY2 GeneID:3726430 KEGG:chy:CHY_1157 PATRIC:21275454
            OMA:FLVDSTN BioCyc:CHYD246194:GJCN-1156-MONOMER Uniprot:Q3ACY2
        Length = 554

 Score = 92 (37.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
 Identities = 17/31 (54%), Positives = 24/31 (77%)

Query:    41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
             L+++P+GGLGEIG N M++   D  I+IDAG
Sbjct:     8 LQIIPLGGLGEIGKNMMVIKYNDAIIVIDAG 38

 Score = 72 (30.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
 Identities = 15/47 (31%), Positives = 30/47 (63%)

Query:    79 YTNICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
             +T +   ++ G+F   ++D +P+DGKV D   L EL ++GV +++ +
Sbjct:   151 HTPVGTVVHTGDF---KLDPTPVDGKVTDFYKLAELGEKGVLVLMSD 194


>TIGR_CMR|NSE_0829 [details] [associations]
            symbol:NSE_0829 "metallo-beta-lactamase family, beta-CASP
            subfamily" species:222891 "Neorickettsia sennetsu str. Miyayama"
            [GO:0003824 "catalytic activity" evidence=ISS] [GO:0016070 "RNA
            metabolic process" evidence=ISS] InterPro:IPR001279
            InterPro:IPR004613 Pfam:PF00753 SMART:SM00849 Pfam:PF07521
            GO:GO:0016787 EMBL:CP000237 GenomeReviews:CP000237_GR
            InterPro:IPR011108 eggNOG:COG0595 PANTHER:PTHR11203:SF22
            HOGENOM:HOG000280200 RefSeq:YP_506699.1 ProteinModelPortal:Q2GCU7
            STRING:Q2GCU7 GeneID:3931644 KEGG:nse:NSE_0829 PATRIC:22681653
            KO:K07021 OMA:MRDDDKL ProtClustDB:CLSK2528128
            BioCyc:NSEN222891:GHFU-835-MONOMER Uniprot:Q2GCU7
        Length = 542

 Score = 89 (36.4 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
 Identities = 19/32 (59%), Positives = 22/32 (68%)

Query:    44 LPIGGLGEIGMNCMLVGNYDRYILIDAGDPGF 75
             LP+GG GEIGMN  L G   R+I+ID G  GF
Sbjct:     9 LPLGGTGEIGMNVTLYGYKGRWIMIDCG-AGF 39

 Score = 71 (30.1 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
 Identities = 15/40 (37%), Positives = 28/40 (70%)

Query:    84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVI 123
             + I++G++   +ID+ P+ GK  D + LEELS++GV  ++
Sbjct:   153 VVIHSGDW---KIDDDPVVGKTCDFKRLEELSEKGVLAMV 189


>TIGR_CMR|DET_0438 [details] [associations]
            symbol:DET_0438 "metallo-beta-lactamase family protein"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0003824
            "catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] InterPro:IPR001279 InterPro:IPR004613 Pfam:PF00753
            PIRSF:PIRSF004803 SMART:SM00849 Pfam:PF07521 GO:GO:0046872
            GO:GO:0003723 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0016788
            InterPro:IPR011108 eggNOG:COG0595 HOGENOM:HOG000280201 KO:K12574
            PANTHER:PTHR11203:SF22 TIGRFAMs:TIGR00649 OMA:FLVDSTN
            RefSeq:YP_181182.1 ProteinModelPortal:Q3Z9B7 STRING:Q3Z9B7
            GeneID:3230229 KEGG:det:DET0438 PATRIC:21607945
            ProtClustDB:CLSK837476 BioCyc:DETH243164:GJNF-438-MONOMER
            Uniprot:Q3Z9B7
        Length = 551

 Score = 89 (36.4 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
 Identities = 18/33 (54%), Positives = 23/33 (69%)

Query:    39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
             P L+++P+GGLGEIG N M V   +  ILID G
Sbjct:     4 PKLKIVPLGGLGEIGKNMMSVEYGEDIILIDCG 36

 Score = 57 (25.1 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query:    80 TNICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
             T I   +++G+F   ++D +P+DGK  +   L  L   GV L++ +
Sbjct:   151 TPIGAVVHSGDF---KLDYTPVDGKPTNLSRLAMLGSRGVLLLMSD 193

 Score = 39 (18.8 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
 Identities = 11/21 (52%), Positives = 16/21 (76%)

Query:   126 GEMLGVSHLRNRRVLS-NGFI 145
             G++ GV  LRNRR+LS +G +
Sbjct:   446 GDVGGVV-LRNRRMLSQDGIV 465


>UNIPROTKB|Q748A2 [details] [associations]
            symbol:GSU3113 "Metal-dependent hydrolase, beta-lactamase
            superfamily" species:243231 "Geobacter sulfurreducens PCA"
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR001279
            InterPro:IPR001587 InterPro:IPR004613 Pfam:PF00753
            PIRSF:PIRSF004803 PROSITE:PS01292 SMART:SM00849 Pfam:PF07521
            GO:GO:0046872 GO:GO:0003723 EMBL:AE017180 GenomeReviews:AE017180_GR
            GO:GO:0016788 InterPro:IPR011108 KO:K12574 PANTHER:PTHR11203:SF22
            TIGRFAMs:TIGR00649 HOGENOM:HOG000280200 OMA:FLVDSTN
            RefSeq:NP_954154.2 ProteinModelPortal:Q748A2 GeneID:2687457
            KEGG:gsu:GSU3113 PATRIC:22029081 ProtClustDB:CLSK829117
            BioCyc:GSUL243231:GH27-3097-MONOMER Uniprot:Q748A2
        Length = 561

 Score = 82 (33.9 bits), Expect = 0.00089, Sum P(2) = 0.00089
 Identities = 17/35 (48%), Positives = 24/35 (68%)

Query:    37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
             NG  LR++P+GGLGEIG+N M   + +  I+ D G
Sbjct:    11 NGG-LRIIPLGGLGEIGLNMMAYEHGEDIIVADCG 44

 Score = 62 (26.9 bits), Expect = 0.00089, Sum P(2) = 0.00089
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query:    84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGV-TLVIKNGEMLGVSHLRNRRVLSN 142
             + I+ G+F   +ID++P+DG++ D         EGV  L+  +  +    +  + RV+  
Sbjct:   163 VVIHTGDF---KIDQTPVDGELTDLATFSRYGDEGVLALLADSTNVEREGYTLSERVVGE 219

Query:   143 GF 144
              F
Sbjct:   220 AF 221


>TIGR_CMR|GSU_3113 [details] [associations]
            symbol:GSU_3113 "metallo-beta-lactamase family protein"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0003824
            "catalytic activity" evidence=ISS] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001279 InterPro:IPR001587
            InterPro:IPR004613 Pfam:PF00753 PIRSF:PIRSF004803 PROSITE:PS01292
            SMART:SM00849 Pfam:PF07521 GO:GO:0046872 GO:GO:0003723
            EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0016788
            InterPro:IPR011108 KO:K12574 PANTHER:PTHR11203:SF22
            TIGRFAMs:TIGR00649 HOGENOM:HOG000280200 OMA:FLVDSTN
            RefSeq:NP_954154.2 ProteinModelPortal:Q748A2 GeneID:2687457
            KEGG:gsu:GSU3113 PATRIC:22029081 ProtClustDB:CLSK829117
            BioCyc:GSUL243231:GH27-3097-MONOMER Uniprot:Q748A2
        Length = 561

 Score = 82 (33.9 bits), Expect = 0.00089, Sum P(2) = 0.00089
 Identities = 17/35 (48%), Positives = 24/35 (68%)

Query:    37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
             NG  LR++P+GGLGEIG+N M   + +  I+ D G
Sbjct:    11 NGG-LRIIPLGGLGEIGLNMMAYEHGEDIIVADCG 44

 Score = 62 (26.9 bits), Expect = 0.00089, Sum P(2) = 0.00089
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query:    84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGV-TLVIKNGEMLGVSHLRNRRVLSN 142
             + I+ G+F   +ID++P+DG++ D         EGV  L+  +  +    +  + RV+  
Sbjct:   163 VVIHTGDF---KIDQTPVDGELTDLATFSRYGDEGVLALLADSTNVEREGYTLSERVVGE 219

Query:   143 GF 144
              F
Sbjct:   220 AF 221


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.142   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      156       144   0.00091  102 3  11 22  0.47    31
                                                     30  0.48    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  539 (57 KB)
  Total size of DFA:  122 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.51u 0.09s 14.60t   Elapsed:  00:00:02
  Total cpu time:  14.51u 0.09s 14.60t   Elapsed:  00:00:02
  Start:  Fri May 10 14:26:44 2013   End:  Fri May 10 14:26:46 2013

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