BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039213
(156 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147856240|emb|CAN81787.1| hypothetical protein VITISV_026006 [Vitis vinifera]
Length = 1616
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 61/68 (89%), Positives = 64/68 (94%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
SKVPR+R+ R EG +KSMEDSVQRKMEQFYEGS GPPLRVLPIGGLGEIGMNCMLVGNYD
Sbjct: 803 SKVPRKRSRRMEGVKKSMEDSVQRKMEQFYEGSEGPPLRVLPIGGLGEIGMNCMLVGNYD 862
Query: 64 RYILIDAG 71
RYILIDAG
Sbjct: 863 RYILIDAG 870
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/31 (83%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDESPLDGKVFDREALEELSKEGVTL++ +
Sbjct: 999 KIDESPLDGKVFDREALEELSKEGVTLMMSD 1029
>gi|297734394|emb|CBI15641.3| unnamed protein product [Vitis vinifera]
Length = 1659
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 61/68 (89%), Positives = 64/68 (94%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
SKVPR+R+ R EG +KSMEDSVQRKMEQFYEGS GPPLRVLPIGGLGEIGMNCMLVGNYD
Sbjct: 814 SKVPRKRSRRMEGVKKSMEDSVQRKMEQFYEGSEGPPLRVLPIGGLGEIGMNCMLVGNYD 873
Query: 64 RYILIDAG 71
RYILIDAG
Sbjct: 874 RYILIDAG 881
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 46/59 (77%), Gaps = 3/59 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
P+ G++ + E L K G+ T VIKNGEMLGVSHLRNRRVLSNGFISLGKENLQ++
Sbjct: 1233 PIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLM 1291
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/31 (83%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDESPLDGKVFDREALEELSKEGVTL++ +
Sbjct: 1010 KIDESPLDGKVFDREALEELSKEGVTLMMSD 1040
>gi|255540285|ref|XP_002511207.1| conserved hypothetical protein [Ricinus communis]
gi|223550322|gb|EEF51809.1| conserved hypothetical protein [Ricinus communis]
Length = 880
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 60/68 (88%), Positives = 64/68 (94%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
SK PR+R+GR EG KSMEDSVQRKMEQFYEGSNGPPLR++PIGGLGEIGMNCMLVGNYD
Sbjct: 42 SKAPRKRSGRMEGAGKSMEDSVQRKMEQFYEGSNGPPLRIVPIGGLGEIGMNCMLVGNYD 101
Query: 64 RYILIDAG 71
RYILIDAG
Sbjct: 102 RYILIDAG 109
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 46/59 (77%), Gaps = 3/59 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
P+ G++ + E L K GV T VIKNGEMLGVSHLRNR+VLSNGFISLGKENLQ++
Sbjct: 461 PIHGELLFLKEHELLGKSTGVRHTTVIKNGEMLGVSHLRNRKVLSNGFISLGKENLQLM 519
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/31 (83%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDESPLDGKVFDREALEELSKEGVTL++ +
Sbjct: 238 KIDESPLDGKVFDREALEELSKEGVTLMMSD 268
>gi|356507349|ref|XP_003522430.1| PREDICTED: ribonuclease J-like [Glycine max]
Length = 888
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 60/65 (92%), Positives = 63/65 (96%)
Query: 7 PRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYI 66
PR+RT R EGPRKSMEDSVQRKMEQFYEGS+GPPLRVLPIGGLGEIGMNCMLVGN+DRYI
Sbjct: 46 PRKRTRRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYI 105
Query: 67 LIDAG 71
LIDAG
Sbjct: 106 LIDAG 110
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 3/58 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQV 154
P+ G++ + E L K G+ T VIKNGEMLGVSHLRNRRVLSNGFISLGKENLQ+
Sbjct: 462 PIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQL 519
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDGKVFDREALEELSKEGVTL++ +
Sbjct: 239 KIDETPLDGKVFDREALEELSKEGVTLMMSD 269
>gi|356516571|ref|XP_003526967.1| PREDICTED: ribonuclease J-like [Glycine max]
Length = 874
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 62/71 (87%), Positives = 67/71 (94%), Gaps = 2/71 (2%)
Query: 3 ESKVP--RRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVG 60
++KVP +RRTGR EGPRKSMEDSVQRKMEQFYEGS+GPPLR+LPIGGLGEIGMNCMLVG
Sbjct: 38 KTKVPPRKRRTGRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRILPIGGLGEIGMNCMLVG 97
Query: 61 NYDRYILIDAG 71
N DRYILIDAG
Sbjct: 98 NNDRYILIDAG 108
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 3/58 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQV 154
P+ G++ + E L K G+ T VIKNGEMLGVSHLRNRRVLSNGFISLGKENLQ+
Sbjct: 460 PIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQL 517
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDGKVFDREALEELSKEGVTL++ +
Sbjct: 237 KIDETPLDGKVFDREALEELSKEGVTLMMSD 267
>gi|225456284|ref|XP_002279798.1| PREDICTED: ribonuclease J-like [Vitis vinifera]
Length = 886
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 61/68 (89%), Positives = 64/68 (94%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
SKVPR+R+ R EG +KSMEDSVQRKMEQFYEGS GPPLRVLPIGGLGEIGMNCMLVGNYD
Sbjct: 41 SKVPRKRSRRMEGVKKSMEDSVQRKMEQFYEGSEGPPLRVLPIGGLGEIGMNCMLVGNYD 100
Query: 64 RYILIDAG 71
RYILIDAG
Sbjct: 101 RYILIDAG 108
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 46/59 (77%), Gaps = 3/59 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
P+ G++ + E L K G+ T VIKNGEMLGVSHLRNRRVLSNGFISLGKENLQ++
Sbjct: 460 PIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLM 518
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/31 (83%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDESPLDGKVFDREALEELSKEGVTL++ +
Sbjct: 237 KIDESPLDGKVFDREALEELSKEGVTLMMSD 267
>gi|9758283|dbj|BAB08807.1| unnamed protein product [Arabidopsis thaliana]
Length = 528
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 59/71 (83%), Positives = 65/71 (91%)
Query: 1 ARESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVG 60
+ SK PRRR+GR EG KSMEDSV+RKMEQFYEG++GPPLR+LPIGGLGEIGMNCMLVG
Sbjct: 70 SSSSKTPRRRSGRLEGVGKSMEDSVKRKMEQFYEGTDGPPLRILPIGGLGEIGMNCMLVG 129
Query: 61 NYDRYILIDAG 71
NYDRYILIDAG
Sbjct: 130 NYDRYILIDAG 140
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDGKVFDREALEELSKEGVTL++ +
Sbjct: 269 KIDEAPLDGKVFDREALEELSKEGVTLMMSD 299
>gi|449501401|ref|XP_004161356.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease J-like [Cucumis
sativus]
Length = 909
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 73/93 (78%), Gaps = 11/93 (11%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
SKVPR+R GR EG ++SMEDSVQRKMEQFYEGS+GPPLRVLPIGGLGEIGMNCMLVGNYD
Sbjct: 63 SKVPRKRPGRLEGAKRSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNYD 122
Query: 64 RYILIDAGDPGFGFQYTNICIFIYNGEFNIQQI 96
RYILIDAG +F + E +Q+I
Sbjct: 123 RYILIDAG-----------VMFPDHDELGVQKI 144
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 33/35 (94%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQV 154
T VIKNGEMLGVSHLRNRRVLSNGF SLG+ENLQ+
Sbjct: 505 TTVIKNGEMLGVSHLRNRRVLSNGFTSLGRENLQL 539
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Query: 85 FIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKNG 126
++ G++ +IDESPLDGKVFDRE LE+LSKEGVTL++ +
Sbjct: 252 ILHTGDW---KIDESPLDGKVFDRETLEQLSKEGVTLMMSDS 290
>gi|449440566|ref|XP_004138055.1| PREDICTED: ribonuclease J-like [Cucumis sativus]
Length = 909
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/93 (69%), Positives = 73/93 (78%), Gaps = 11/93 (11%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
SKVPR+R GR EG ++SMEDSVQRKMEQFYEGS+GPPLRVLPIGGLGEIGMNCMLVGNYD
Sbjct: 63 SKVPRKRPGRLEGAKRSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNYD 122
Query: 64 RYILIDAGDPGFGFQYTNICIFIYNGEFNIQQI 96
RYILIDAG +F + E +Q+I
Sbjct: 123 RYILIDAG-----------VMFPDHDELGVQKI 144
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 33/35 (94%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQV 154
T VIKNGEMLGVSHLRNRRVLSNGF SLG+ENLQ+
Sbjct: 505 TTVIKNGEMLGVSHLRNRRVLSNGFTSLGRENLQL 539
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Query: 85 FIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKNG 126
++ G++ +IDESPLDGKVFDRE LE+LSKEGVTL++ +
Sbjct: 252 ILHTGDW---KIDESPLDGKVFDRETLEQLSKEGVTLMMSDS 290
>gi|297793923|ref|XP_002864846.1| EMB2746 [Arabidopsis lyrata subsp. lyrata]
gi|297310681|gb|EFH41105.1| EMB2746 [Arabidopsis lyrata subsp. lyrata]
Length = 927
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 60/68 (88%), Positives = 64/68 (94%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
SK PRRR+GR EG KSMEDSV+RKMEQFYEG++GPPLRVLPIGGLGEIGMNCMLVGNYD
Sbjct: 72 SKTPRRRSGRPEGVGKSMEDSVKRKMEQFYEGTDGPPLRVLPIGGLGEIGMNCMLVGNYD 131
Query: 64 RYILIDAG 71
RYILIDAG
Sbjct: 132 RYILIDAG 139
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
P+ G++ + E L K G+ T VIKNGEMLGVSHLRNRRVLSNGF SLG+ENLQ++
Sbjct: 491 PIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFSSLGRENLQLM 549
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDGKVFDREALEELSKEGVTL++ +
Sbjct: 268 KIDEAPLDGKVFDREALEELSKEGVTLMMSD 298
>gi|51971236|dbj|BAD44310.1| putative protein [Arabidopsis thaliana]
Length = 911
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 59/71 (83%), Positives = 65/71 (91%)
Query: 1 ARESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVG 60
+ SK PRRR+GR EG KSMEDSV+RKMEQFYEG++GPPLR+LPIGGLGEIGMNCMLVG
Sbjct: 70 SSSSKTPRRRSGRLEGVGKSMEDSVKRKMEQFYEGTDGPPLRILPIGGLGEIGMNCMLVG 129
Query: 61 NYDRYILIDAG 71
NYDRYILIDAG
Sbjct: 130 NYDRYILIDAG 140
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
P+ G++ + E L K G+ T VIKNGEMLGVSHLRNRRVLSNGF SLG+ENLQ++
Sbjct: 492 PIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFSSLGRENLQLM 550
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDGKVFDREALEELSKEGVTL++ +
Sbjct: 269 KIDEAPLDGKVFDREALEELSKEGVTLMMSD 299
>gi|42568733|ref|NP_201147.2| RNA-metabolising metallo-beta-lactamase family protein [Arabidopsis
thaliana]
gi|28393617|gb|AAO42228.1| unknown protein [Arabidopsis thaliana]
gi|62319893|dbj|BAD93952.1| putative protein [Arabidopsis thaliana]
gi|332010363|gb|AED97746.1| RNA-metabolising metallo-beta-lactamase family protein [Arabidopsis
thaliana]
Length = 911
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 59/71 (83%), Positives = 65/71 (91%)
Query: 1 ARESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVG 60
+ SK PRRR+GR EG KSMEDSV+RKMEQFYEG++GPPLR+LPIGGLGEIGMNCMLVG
Sbjct: 70 SSSSKTPRRRSGRLEGVGKSMEDSVKRKMEQFYEGTDGPPLRILPIGGLGEIGMNCMLVG 129
Query: 61 NYDRYILIDAG 71
NYDRYILIDAG
Sbjct: 130 NYDRYILIDAG 140
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
P+ G++ + E L K G+ T VIKNGEMLGVSHLRNRRVLSNGF SLG+ENLQ++
Sbjct: 492 PIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFSSLGRENLQLM 550
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDGKVFDREALEELSKEGVTL++ +
Sbjct: 269 KIDEAPLDGKVFDREALEELSKEGVTLMMSD 299
>gi|357463617|ref|XP_003602090.1| Ribonuclease J [Medicago truncatula]
gi|355491138|gb|AES72341.1| Ribonuclease J [Medicago truncatula]
Length = 959
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 58/68 (85%), Positives = 65/68 (95%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
S+VP++R R EGPRKSMEDSVQR+MEQFYEG++GPPLRVLPIGGLGEIGMNCMLVGN+D
Sbjct: 41 SRVPQKRRRRIEGPRKSMEDSVQRRMEQFYEGNDGPPLRVLPIGGLGEIGMNCMLVGNHD 100
Query: 64 RYILIDAG 71
RYILIDAG
Sbjct: 101 RYILIDAG 108
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/58 (67%), Positives = 44/58 (75%), Gaps = 3/58 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQV 154
P+ G+ + E L K G+ T VIKNGEMLGVSHLRNRRVLSNGFISLGKENLQ+
Sbjct: 471 PVHGEYLFLKEHESLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQL 528
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/31 (77%), Positives = 29/31 (93%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDGKVFDRE LEELSKEGVTL++ +
Sbjct: 237 KIDETPLDGKVFDREGLEELSKEGVTLMMSD 267
>gi|357477147|ref|XP_003608859.1| Ribonuclease J [Medicago truncatula]
gi|355509914|gb|AES91056.1| Ribonuclease J [Medicago truncatula]
Length = 739
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/68 (85%), Positives = 63/68 (92%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
+KV +R R EGPRKSMEDSVQRKMEQFYEGS+GPPLRVLPIGGLGEIGMNCMLVGN+D
Sbjct: 45 AKVVHKRPRRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHD 104
Query: 64 RYILIDAG 71
RYIL+DAG
Sbjct: 105 RYILVDAG 112
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/38 (84%), Positives = 36/38 (94%)
Query: 117 EGVTLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQV 154
+G LVIKNGEMLGVSHLRNR+VLSNGFISLGKENL++
Sbjct: 502 DGKLLVIKNGEMLGVSHLRNRKVLSNGFISLGKENLEL 539
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDGKVFDREALEELSKEGVTL++ +
Sbjct: 241 KIDETPLDGKVFDREALEELSKEGVTLMMSD 271
>gi|50252673|dbj|BAD28842.1| putative metallo beta subunit lactamase [Oryza sativa Japonica
Group]
Length = 506
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/71 (81%), Positives = 65/71 (91%)
Query: 1 ARESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVG 60
++ES+ PRRR +TEG KS+EDSV+RKMEQFYEG +GPPLRVLPIGGLGEIGMNCMLVG
Sbjct: 41 SQESRTPRRRVRKTEGATKSLEDSVKRKMEQFYEGLDGPPLRVLPIGGLGEIGMNCMLVG 100
Query: 61 NYDRYILIDAG 71
NYDRYILIDAG
Sbjct: 101 NYDRYILIDAG 111
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 35/42 (83%), Gaps = 3/42 (7%)
Query: 84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
I + G++ +IDESP+DGK+FDR+ALEELSKEGVTL++ +
Sbjct: 232 IIFHTGDW---KIDESPVDGKIFDRQALEELSKEGVTLMMSD 270
>gi|222623010|gb|EEE57142.1| hypothetical protein OsJ_07047 [Oryza sativa Japonica Group]
Length = 868
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/71 (81%), Positives = 65/71 (91%)
Query: 1 ARESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVG 60
++ES+ PRRR +TEG KS+EDSV+RKMEQFYEG +GPPLRVLPIGGLGEIGMNCMLVG
Sbjct: 41 SQESRTPRRRVRKTEGATKSLEDSVKRKMEQFYEGLDGPPLRVLPIGGLGEIGMNCMLVG 100
Query: 61 NYDRYILIDAG 71
NYDRYILIDAG
Sbjct: 101 NYDRYILIDAG 111
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/36 (80%), Positives = 35/36 (97%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
T VIKNGEMLGVSHLRNRRVLSNGF++LGKE+L+++
Sbjct: 486 TTVIKNGEMLGVSHLRNRRVLSNGFVALGKEDLRLM 521
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 35/42 (83%), Gaps = 3/42 (7%)
Query: 84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
I + G++ +IDESP+DGK+FDR+ALEELSKEGVTL++ +
Sbjct: 232 IIFHTGDW---KIDESPVDGKIFDRQALEELSKEGVTLMMSD 270
>gi|242060800|ref|XP_002451689.1| hypothetical protein SORBIDRAFT_04g005900 [Sorghum bicolor]
gi|241931520|gb|EES04665.1| hypothetical protein SORBIDRAFT_04g005900 [Sorghum bicolor]
Length = 875
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/95 (66%), Positives = 72/95 (75%), Gaps = 11/95 (11%)
Query: 2 RESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGN 61
+ES+ PRRR +TEG KS+EDSV+RKMEQFYEG +GPPLRVLPIGGLGEIGMNCMLVGN
Sbjct: 47 QESRTPRRRLRKTEGATKSLEDSVKRKMEQFYEGVDGPPLRVLPIGGLGEIGMNCMLVGN 106
Query: 62 YDRYILIDAGDPGFGFQYTNICIFIYNGEFNIQQI 96
YDRYILIDAG +F EF +Q+I
Sbjct: 107 YDRYILIDAG-----------VMFPDYDEFGVQKI 130
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/36 (83%), Positives = 35/36 (97%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
T VIKNGEMLGVSHLR+RRVLSNGF+SLGKE+LQ++
Sbjct: 491 TTVIKNGEMLGVSHLRSRRVLSNGFVSLGKEDLQLM 526
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 35/42 (83%), Gaps = 3/42 (7%)
Query: 84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
I + G++ +IDESP+DGK+FDR+ALEELSKEGVTL++ +
Sbjct: 237 IIFHTGDW---KIDESPVDGKIFDRQALEELSKEGVTLMMSD 275
>gi|218190927|gb|EEC73354.1| hypothetical protein OsI_07566 [Oryza sativa Indica Group]
Length = 871
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/71 (81%), Positives = 65/71 (91%)
Query: 1 ARESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVG 60
++ES+ PRRR +TEG KS+EDSV+RKMEQFYEG +GPPLRVLPIGGLGEIGMNCMLVG
Sbjct: 41 SQESRTPRRRVRKTEGATKSLEDSVKRKMEQFYEGLDGPPLRVLPIGGLGEIGMNCMLVG 100
Query: 61 NYDRYILIDAG 71
NYDRYILIDAG
Sbjct: 101 NYDRYILIDAG 111
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/36 (80%), Positives = 35/36 (97%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
T VIKNGEMLGVSHLRNRRVLSNGF++LGKE+L+++
Sbjct: 486 TTVIKNGEMLGVSHLRNRRVLSNGFVALGKEDLRLM 521
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 35/42 (83%), Gaps = 3/42 (7%)
Query: 84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
I + G++ +IDESP+DGK+FDR+ALEELSKEGVTL++ +
Sbjct: 232 IIFHTGDW---KIDESPVDGKIFDRQALEELSKEGVTLMMSD 270
>gi|356565270|ref|XP_003550865.1| PREDICTED: ribonuclease J-like [Glycine max]
Length = 886
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 58/67 (86%), Positives = 62/67 (92%)
Query: 5 KVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDR 64
KV R+R+ R EGPRKSMEDSVQ KME+FYEG +GPPLRVLPIGGLGEIGMNCMLVGNYDR
Sbjct: 44 KVLRKRSRRIEGPRKSMEDSVQCKMEEFYEGQDGPPLRVLPIGGLGEIGMNCMLVGNYDR 103
Query: 65 YILIDAG 71
YILIDAG
Sbjct: 104 YILIDAG 110
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/59 (66%), Positives = 46/59 (77%), Gaps = 3/59 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
P+ G++ + E L K G+ T VIKNGEMLGVSHLRNRRVLSNGFISLGKENLQ++
Sbjct: 479 PIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLM 537
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/31 (77%), Positives = 30/31 (96%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDG+VFDREALEELSKEGVTL++ +
Sbjct: 239 KIDETPLDGRVFDREALEELSKEGVTLMMSD 269
>gi|413935958|gb|AFW70509.1| hypothetical protein ZEAMMB73_357548 [Zea mays]
Length = 169
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 85/126 (67%), Gaps = 19/126 (15%)
Query: 2 RESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGN 61
+ES+ PRRR +TEG KS+EDSV+RKMEQFYEG++GPPLRVLPIGGLGEIGMNCMLVGN
Sbjct: 47 QESRTPRRRLRKTEGATKSLEDSVKRKMEQFYEGADGPPLRVLPIGGLGEIGMNCMLVGN 106
Query: 62 YDRYILIDAGDPGFGFQYTNICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTL 121
YDRYILIDAG +F EF +Q+I + D +++ S + +
Sbjct: 107 YDRYILIDAG-----------VMFPDYDEFGVQKI--------IPDTTFIKKWSHKIEAV 147
Query: 122 VIKNGE 127
+I +G
Sbjct: 148 IITHGH 153
>gi|413926325|gb|AFW66257.1| hypothetical protein ZEAMMB73_692349 [Zea mays]
Length = 146
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/70 (84%), Positives = 65/70 (92%)
Query: 2 RESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGN 61
+ES+ PRRR +TEG KS+EDSV+RKMEQFYEGS+GPPLRVLPIGGLGEIGMNCMLVGN
Sbjct: 47 QESRTPRRRLRKTEGASKSLEDSVKRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGN 106
Query: 62 YDRYILIDAG 71
YDRYILIDAG
Sbjct: 107 YDRYILIDAG 116
>gi|224119634|ref|XP_002318122.1| predicted protein [Populus trichocarpa]
gi|222858795|gb|EEE96342.1| predicted protein [Populus trichocarpa]
Length = 890
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/65 (86%), Positives = 61/65 (93%)
Query: 7 PRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYI 66
PR+RTGR EG KSMEDSV+RKMEQFYEG +GPPLR++PIGGLGEIGMNCMLVGNYDRYI
Sbjct: 47 PRKRTGRKEGTGKSMEDSVKRKMEQFYEGPDGPPLRIVPIGGLGEIGMNCMLVGNYDRYI 106
Query: 67 LIDAG 71
LIDAG
Sbjct: 107 LIDAG 111
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 3/59 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
P+ G++ + E L K G+ T VIKNGEMLGVSHLRNRRVLSNGF+SLGKENLQ++
Sbjct: 463 PIHGELLFLKEHELLGKSTGIQHTTVIKNGEMLGVSHLRNRRVLSNGFVSLGKENLQLM 521
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 29/31 (93%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDESPLDGKVFDRE LEELSKEGVTL++ +
Sbjct: 240 KIDESPLDGKVFDRETLEELSKEGVTLMMSD 270
>gi|168046126|ref|XP_001775526.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673196|gb|EDQ59723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 582
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/60 (78%), Positives = 55/60 (91%)
Query: 12 GRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
G EGP++S +D+V RKM+ F+EGS+GPPLRVLPIGGLGEIGMNCMLVGNYDRYI+IDAG
Sbjct: 1 GHYEGPKRSRDDAVTRKMKSFHEGSDGPPLRVLPIGGLGEIGMNCMLVGNYDRYIMIDAG 60
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
T VIKNGEMLGV+ LRN RVLS+GF LG+E L+++
Sbjct: 436 TAVIKNGEMLGVAPLRNGRVLSSGFSQLGREKLKLM 471
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDESP+DG VFDR ALE+L KEGVTL++ +
Sbjct: 189 KIDESPVDGNVFDRVALEQLQKEGVTLMMSD 219
>gi|224133910|ref|XP_002321690.1| predicted protein [Populus trichocarpa]
gi|222868686|gb|EEF05817.1| predicted protein [Populus trichocarpa]
Length = 63
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/57 (87%), Positives = 55/57 (96%)
Query: 15 EGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
EG KSMEDSV+RKMEQFYEGS+GPPLR++PIGGLGEIGMNCMLVGN+DRYILIDAG
Sbjct: 2 EGAGKSMEDSVKRKMEQFYEGSDGPPLRIVPIGGLGEIGMNCMLVGNFDRYILIDAG 58
>gi|302786496|ref|XP_002975019.1| hypothetical protein SELMODRAFT_102611 [Selaginella
moellendorffii]
gi|300157178|gb|EFJ23804.1| hypothetical protein SELMODRAFT_102611 [Selaginella
moellendorffii]
Length = 829
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 8 RRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYIL 67
+ R G EG S +D+VQR M +FYEG NGPPLR+LPIGGLGEIGMNCMLVG+YDRYI+
Sbjct: 1 QSRYGILEGAGHSKDDAVQRTMRKFYEGRNGPPLRILPIGGLGEIGMNCMLVGHYDRYIM 60
Query: 68 IDAG 71
IDAG
Sbjct: 61 IDAG 64
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
T VI+NGEMLGVS LRNRRVLS+GF +LGKE+LQ++
Sbjct: 439 TKVIRNGEMLGVSPLRNRRVLSSGFAALGKEDLQLM 474
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDGK+FDR LEEL KEGVTL++ +
Sbjct: 193 KIDENPLDGKIFDRNTLEELGKEGVTLMMSD 223
>gi|302791347|ref|XP_002977440.1| hypothetical protein SELMODRAFT_107166 [Selaginella
moellendorffii]
gi|300154810|gb|EFJ21444.1| hypothetical protein SELMODRAFT_107166 [Selaginella
moellendorffii]
Length = 835
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/64 (71%), Positives = 53/64 (82%)
Query: 8 RRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYIL 67
+ R G EG S +D+VQR M +FYEG NGPPLR+LPIGGLGEIGMNCMLVG+YDRYI+
Sbjct: 1 QSRYGILEGAGYSKDDAVQRTMRKFYEGRNGPPLRILPIGGLGEIGMNCMLVGHYDRYIM 60
Query: 68 IDAG 71
IDAG
Sbjct: 61 IDAG 64
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
T VI+NGEMLGVS LRNRRVLS+GF +LGKE+LQ++
Sbjct: 439 TKVIRNGEMLGVSPLRNRRVLSSGFAALGKEDLQLM 474
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+PLDGK+FDR LEEL KEGVTL++ +
Sbjct: 193 KIDENPLDGKIFDRNTLEELGKEGVTLMMSD 223
>gi|413955882|gb|AFW88531.1| putative homeodomain containing protein [Zea mays]
Length = 673
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/35 (88%), Positives = 35/35 (100%)
Query: 121 LVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
LVIKNGEMLGVSHLRNRRVLSNGF+SLGKE+LQ++
Sbjct: 193 LVIKNGEMLGVSHLRNRRVLSNGFVSLGKEDLQLM 227
>gi|413926324|gb|AFW66256.1| putative metallo-beta-lactamase homeodomain-containing protein [Zea
mays]
Length = 695
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 3/59 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
P+ G++ + E L + G+ T VIKNGEMLGVSHLRNRRVLSNGF+SLGKE+LQ++
Sbjct: 289 PVHGELLFLKEHESLGRSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFVSLGKEDLQLM 347
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Query: 84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
I + G++ +IDESP+DGK FDR+ALEELSKEGVTL++ +
Sbjct: 58 IIFHTGDW---KIDESPVDGKNFDRQALEELSKEGVTLMMSD 96
>gi|413935960|gb|AFW70511.1| putative metallo-beta-lactamase homeodomain-containing protein [Zea
mays]
Length = 510
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/36 (86%), Positives = 35/36 (97%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
T VIKNGEMLGVSHLRNRRVLSNGF+SLGKE+LQ++
Sbjct: 127 TTVIKNGEMLGVSHLRNRRVLSNGFVSLGKEDLQLM 162
>gi|414877081|tpg|DAA54212.1| TPA: putative homeodomain containing protein [Zea mays]
Length = 514
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 46/59 (77%), Gaps = 3/59 (5%)
Query: 100 PLDGKVFDREALEELSKE-GV--TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
P+ G++ + E L + G+ T VIKNGEMLGVSHLRNRR+LSNGF+SLGKE+LQ++
Sbjct: 149 PIHGELLFLKEHESLGRSTGIRHTTVIKNGEMLGVSHLRNRRLLSNGFVSLGKEDLQLM 207
>gi|413926323|gb|AFW66255.1| putative metallo-beta-lactamase homeodomain-containing protein [Zea
mays]
Length = 366
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQ 153
T VIKNGEMLGVSHLRNRRVLSNGF+SLGKE+LQ
Sbjct: 312 TTVIKNGEMLGVSHLRNRRVLSNGFVSLGKEDLQ 345
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Query: 84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
I + G++ +IDESP+DGK FDR+ALEELSKEGVTL++ +
Sbjct: 58 IIFHTGDW---KIDESPVDGKNFDRQALEELSKEGVTLMMSD 96
>gi|224133916|ref|XP_002321691.1| predicted protein [Populus trichocarpa]
gi|222868687|gb|EEF05818.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 34/36 (94%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
T VIKNGEMLGVSHLRNRRVLSNGF+ LGKENLQ++
Sbjct: 160 TAVIKNGEMLGVSHLRNRRVLSNGFVFLGKENLQLM 195
>gi|413923440|gb|AFW63372.1| hypothetical protein ZEAMMB73_090162 [Zea mays]
Length = 188
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 34/35 (97%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQV 154
T VIKNGEMLGVSHLRNRRVLS+GF+SLGKE+LQV
Sbjct: 127 TTVIKNGEMLGVSHLRNRRVLSSGFVSLGKEDLQV 161
>gi|307106517|gb|EFN54762.1| hypothetical protein CHLNCDRAFT_35723 [Chlorella variabilis]
Length = 814
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/31 (90%), Positives = 30/31 (96%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LRVLPIGGLGEIGMNCML+G YDRYIL+DAG
Sbjct: 94 LRVLPIGGLGEIGMNCMLIGVYDRYILVDAG 124
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 25/31 (80%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+P+DG+ FDR+ +E+ +EGV+L + +
Sbjct: 253 KIDENPVDGESFDRQVFDEIGREGVSLFMSD 283
>gi|159467781|ref|XP_001692070.1| hypothetical protein CHLREDRAFT_115745 [Chlamydomonas
reinhardtii]
gi|158278797|gb|EDP04560.1| predicted protein [Chlamydomonas reinhardtii]
Length = 415
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 31/34 (91%)
Query: 38 GPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
GPPLR+LPIGGLGEIGMNCML G DRY++IDAG
Sbjct: 1 GPPLRILPIGGLGEIGMNCMLAGVGDRYVVIDAG 34
>gi|145350454|ref|XP_001419620.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579852|gb|ABO97913.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 413
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 33/35 (94%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ PPL++LP+GGLGEIGMNCMLVG+ DRY+L+DAG
Sbjct: 2 DDPPLKILPLGGLGEIGMNCMLVGSGDRYVLLDAG 36
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 85 FIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
++ G++ +IDE+P+DG++FDR + E + EGVTL++ +
Sbjct: 158 IVHTGDW---KIDENPVDGRIFDRTSWERVGNEGVTLMMSD 195
>gi|413919101|gb|AFW59033.1| hypothetical protein ZEAMMB73_701062 [Zea mays]
gi|413919102|gb|AFW59034.1| hypothetical protein ZEAMMB73_701062 [Zea mays]
Length = 159
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENL 152
T VIKNGEMLGVSHLRNRRVLSNGF+SLGKE+L
Sbjct: 127 TTVIKNGEMLGVSHLRNRRVLSNGFVSLGKEDL 159
>gi|412990832|emb|CCO18204.1| predicted protein [Bathycoccus prasinos]
Length = 850
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 31/33 (93%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PP+++LP+GGLGEIGMNCMLVG DRYIL+DAG
Sbjct: 206 PPIKILPLGGLGEIGMNCMLVGVNDRYILLDAG 238
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE P+D ++FDR A E++ KEGVTL++ +
Sbjct: 367 KIDEDPVDNQIFDRTAWEQVGKEGVTLMMSD 397
>gi|357149376|ref|XP_003575091.1| PREDICTED: ribonuclease J-like [Brachypodium distachyon]
Length = 605
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/36 (72%), Positives = 33/36 (91%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQVI 155
T VIKNGEMLGVSHLRNR+VLSNGF++LGK+ +++
Sbjct: 220 TTVIKNGEMLGVSHLRNRKVLSNGFVALGKQEFKLM 255
>gi|187766731|gb|ACD36970.1| chloroplast RNase J variant 2 [Chlamydomonas reinhardtii]
Length = 767
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LR+LPIGGLGEIGMNCML G DRY++IDAG
Sbjct: 119 LRILPIGGLGEIGMNCMLAGVGDRYVVIDAG 149
>gi|302835740|ref|XP_002949431.1| hypothetical protein VOLCADRAFT_59321 [Volvox carteri f.
nagariensis]
gi|300265258|gb|EFJ49450.1| hypothetical protein VOLCADRAFT_59321 [Volvox carteri f.
nagariensis]
Length = 463
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LR+LPIGGLGEIGMNCML G DRY++IDAG
Sbjct: 32 LRILPIGGLGEIGMNCMLAGVRDRYVVIDAG 62
>gi|303275824|ref|XP_003057206.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461558|gb|EEH58851.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 813
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/33 (69%), Positives = 29/33 (87%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PP++ LP+GGLGEIGMNC LVG +RY+L+DAG
Sbjct: 146 PPIKFLPLGGLGEIGMNCALVGTENRYVLLDAG 178
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+P+DG FDR A E + +EGVTL++ +
Sbjct: 310 KIDENPVDGLNFDRSAWERVGQEGVTLMMSD 340
>gi|187766729|gb|ACD36969.1| chloroplast RNase J variant 1 [Chlamydomonas reinhardtii]
Length = 920
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LR+LPIGGLGEIGMNCML G DRY++IDAG
Sbjct: 119 LRILPIGGLGEIGMNCMLAGVGDRYVVIDAG 149
>gi|255088049|ref|XP_002505947.1| predicted protein [Micromonas sp. RCC299]
gi|226521218|gb|ACO67205.1| predicted protein [Micromonas sp. RCC299]
Length = 791
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 40 PLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P++ LP+GGLGEIGMNC LVG +RY+L+DAG
Sbjct: 133 PIKFLPLGGLGEIGMNCALVGTENRYVLLDAG 164
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE+P+DG FDRE E + KEGVTL++ +
Sbjct: 294 KIDENPVDGLNFDREQFERVGKEGVTLMMSD 324
>gi|161899375|ref|XP_001712914.1| regulator of transcription that contains myb domains [Bigelowiella
natans]
gi|75756408|gb|ABA27302.1| regulator of transcription that contains myb domains [Bigelowiella
natans]
Length = 636
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 23 DSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+++ RK + E + V+P+GGLGEIGMNCML+G+ R+ILID G
Sbjct: 55 NTILRKKNRVIEQVLDKDIIVVPLGGLGEIGMNCMLIGSKKRFILIDCG 103
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Query: 84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLR--NRRVLS 141
+ ++ G++ +IDE PLDG+ FDRE LE +SKE V L++ + +SH R + +V+
Sbjct: 224 LIVHTGDW---KIDEFPLDGEKFDREFLESISKEKVLLMMSDSTN-SLSHGRTASEKVVQ 279
Query: 142 NGFISL 147
+ +S+
Sbjct: 280 DSLVSI 285
>gi|413935959|gb|AFW70510.1| hypothetical protein ZEAMMB73_470070 [Zea mays]
Length = 201
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
Query: 84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKNG 126
I + G++ +IDESP+DGK FDR+ALEELSKEGVTL++ +
Sbjct: 58 IIFHTGDW---KIDESPVDGKKFDRQALEELSKEGVTLMMSDS 97
>gi|413923439|gb|AFW63371.1| hypothetical protein ZEAMMB73_090162 [Zea mays]
Length = 528
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/24 (91%), Positives = 23/24 (95%)
Query: 120 TLVIKNGEMLGVSHLRNRRVLSNG 143
T VIKNGEMLGVSHLRNRRVLS+G
Sbjct: 319 TTVIKNGEMLGVSHLRNRRVLSSG 342
>gi|92114196|ref|YP_574124.1| beta-lactamase-like protein [Chromohalobacter salexigens DSM
3043]
gi|91797286|gb|ABE59425.1| beta-lactamase-like protein [Chromohalobacter salexigens DSM
3043]
Length = 560
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PPL +LP+GG GEIGMN L G+ D +I++D G
Sbjct: 14 PPLHMLPLGGCGEIGMNFTLYGHQDHWIVVDCG 46
>gi|153002975|ref|YP_001377300.1| beta-lactamase domain-containing protein [Anaeromyxobacter sp.
Fw109-5]
gi|152026548|gb|ABS24316.1| beta-lactamase domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 550
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 38 GPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PP+R++P+GGLGEIGMNCM + R ++D G
Sbjct: 2 APPVRIVPLGGLGEIGMNCMAIEADGRMAVVDCG 35
>gi|162448647|ref|YP_001611014.1| metallo-beta-lactamase [Sorangium cellulosum So ce56]
gi|161159229|emb|CAN90534.1| hypothetical metallo-beta-lactamase family protein [Sorangium
cellulosum So ce56]
Length = 613
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGFQYTNICIFIYNGEFN 92
LR++P+GGLGE+GMNC+ + D +LID G F T++ + +Y+ F+
Sbjct: 71 LRLVPLGGLGEVGMNCLALQQADGLLLIDC---GVTFPSTDLGVDVYHPRFD 119
>gi|308808075|ref|XP_003081348.1| putative metallo beta subunit lactamase (ISS) [Ostreococcus tauri]
gi|116059810|emb|CAL55517.1| putative metallo beta subunit lactamase (ISS) [Ostreococcus tauri]
Length = 404
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 17/85 (20%)
Query: 85 FIYNGEFNIQQIDESPLDGKVFDREALEELSKE--------GV--TLVIKNGEMLGVSHL 134
++ G++ +IDE+P+DG FDR + E + +E GV T VI NGEMLGV+ L
Sbjct: 145 IVHTGDW---KIDETPVDGLHFDRTSWERVGQEXXXXXXXSGVMHTTVIGNGEMLGVTPL 201
Query: 135 RNRR---VLSNGFISLGKENLQVIL 156
++ L N F +GK LQ +
Sbjct: 202 AKKKQHGTLGN-FHRVGKARLQTMF 225
>gi|436842894|ref|YP_007327272.1| Beta-lactamase domain protein [Desulfovibrio hydrothermalis AM13
= DSM 14728]
gi|432171800|emb|CCO25173.1| Beta-lactamase domain protein [Desulfovibrio hydrothermalis AM13
= DSM 14728]
Length = 567
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L V P+GGLGEIG+NCML+ + ++ID G
Sbjct: 4 PQLTVCPLGGLGEIGLNCMLLSTAESLVIIDCG 36
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 20/81 (24%)
Query: 59 VGNYDRYILIDAGDPGFGF--------------QYTNICIFIYNGEFNIQQIDESPLDGK 104
V YDR +D GD F F T + ++ G+F +ID PLDG+
Sbjct: 119 VKAYDR---VDLGDMAFNFFPVCHSIIDGFGLGIETPVGRVVHTGDF---KIDRDPLDGQ 172
Query: 105 VFDREALEELSKEGVTLVIKN 125
D +A +E S++GVTL+ +
Sbjct: 173 ATDLKAFKEFSEQGVTLLFSD 193
>gi|320106083|ref|YP_004181673.1| RNA-metabolising metallo-beta-lactamase [Terriglobus saanensis
SP1PR4]
gi|319924604|gb|ADV81679.1| RNA-metabolising metallo-beta-lactamase [Terriglobus saanensis
SP1PR4]
Length = 557
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N L+V+P+GGLGE GMNCM + D I+IDAG
Sbjct: 6 NVDKLKVIPLGGLGEFGMNCMAIRYKDDIIVIDAG 40
>gi|373486810|ref|ZP_09577481.1| RNA-metabolising metallo-beta-lactamase [Holophaga foetida DSM
6591]
gi|372010763|gb|EHP11366.1| RNA-metabolising metallo-beta-lactamase [Holophaga foetida DSM
6591]
Length = 574
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 31 QFYEGSNGPP----LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
Q ++ + PP LR++PIGGLGE GMNCM+V L+D G
Sbjct: 6 QPFDSWSEPPAEGELRLVPIGGLGEFGMNCMVVHTSKSLFLVDCG 50
>gi|406906160|gb|EKD47403.1| hypothetical protein ACD_66C00079G0002 [uncultured bacterium]
Length = 621
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 7 PRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYI 66
P + RT+ PR + + R + Q ++G G +R++ +GGL E+G NC L+ + I
Sbjct: 37 PVLQQNRTQQPRPTQQ---HRPVVQTFKGQAGEEVRLIVLGGLEEVGRNCTLIEYKNDII 93
Query: 67 LIDAG 71
LID G
Sbjct: 94 LIDMG 98
>gi|322436584|ref|YP_004218796.1| RNA-metabolising metallo-beta-lactamase [Granulicella tundricola
MP5ACTX9]
gi|321164311|gb|ADW70016.1| RNA-metabolising metallo-beta-lactamase [Granulicella tundricola
MP5ACTX9]
Length = 554
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LR++P+GGLGE GMNCM + D I+IDAG
Sbjct: 6 LRLIPLGGLGEFGMNCMALRWQDDIIVIDAG 36
>gi|86156524|ref|YP_463309.1| beta-lactamase-like protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773035|gb|ABC79872.1| Beta-lactamase-like protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 550
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 40 PLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P+R++P+GGLGEIGMNCM V R ++D G
Sbjct: 4 PVRIVPLGGLGEIGMNCMAVECDGRIAVVDCG 35
>gi|307545565|ref|YP_003898044.1| ribonuclease J [Halomonas elongata DSM 2581]
gi|307217589|emb|CBV42859.1| K07021 [Halomonas elongata DSM 2581]
Length = 556
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 40 PLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PL +LP+GG GEIGMN L + DR+I +D G
Sbjct: 15 PLHLLPLGGCGEIGMNLTLYEHRDRWIAVDCG 46
>gi|189426463|ref|YP_001953640.1| beta-lactamase [Geobacter lovleyi SZ]
gi|189422722|gb|ACD97120.1| beta-lactamase domain protein [Geobacter lovleyi SZ]
Length = 593
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 40 PLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PLR++ +GGLGEIG+NCM D IL+DAG
Sbjct: 47 PLRIVALGGLGEIGINCMAYEYGDDLILVDAG 78
>gi|94969119|ref|YP_591167.1| beta-lactamase-like protein [Candidatus Koribacter versatilis
Ellin345]
gi|94551169|gb|ABF41093.1| beta-lactamase-like protein [Candidatus Koribacter versatilis
Ellin345]
Length = 556
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+V+P+GGLGE GMNCM V D ++IDAG
Sbjct: 6 LQVIPLGGLGEFGMNCMAVRYGDDIVVIDAG 36
>gi|390959089|ref|YP_006422846.1| putative metallo-beta-lactamase superfamily hydrolase
[Terriglobus roseus DSM 18391]
gi|390414007|gb|AFL89511.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Terriglobus roseus DSM 18391]
Length = 553
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGE GMNCM + D ++IDAG
Sbjct: 6 LKIIPLGGLGEFGMNCMAIQWKDDIVVIDAG 36
>gi|242278739|ref|YP_002990868.1| beta-lactamase [Desulfovibrio salexigens DSM 2638]
gi|242121633|gb|ACS79329.1| beta-lactamase domain protein [Desulfovibrio salexigens DSM 2638]
Length = 567
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ P L V P+GGLGEIG+NCM++ + +++D G
Sbjct: 2 SDPQLTVCPLGGLGEIGLNCMMLSTAETAVVVDCG 36
>gi|258406059|ref|YP_003198801.1| beta-lactamase domain-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257798286|gb|ACV69223.1| beta-lactamase domain protein [Desulfohalobium retbaense DSM
5692]
Length = 555
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 34 EGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
E ++ P + + P+GGLG+IG+NCML+ D +LID G
Sbjct: 3 EKNDTPWVTLSPLGGLGQIGLNCMLLETADSAVLIDCG 40
>gi|51892694|ref|YP_075385.1| zinc-dependent hydrolase [Symbiobacterium thermophilum IAM 14863]
gi|51856383|dbj|BAD40541.1| Zn-dependent hydrolase beta-lactamase superfamily
[Symbiobacterium thermophilum IAM 14863]
Length = 558
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L V+P+GGLGEIG NCM+V D I+IDAG
Sbjct: 11 LYVIPLGGLGEIGKNCMVVQYGDDIIVIDAG 41
>gi|78780129|ref|YP_398241.1| hypothetical protein PMT9312_1744 [Prochlorococcus marinus str.
MIT 9312]
gi|78713628|gb|ABB50805.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9312]
Length = 660
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG--DPGFGFQYTNICI 84
SN P LRV+P+GGL EIG N + D +L+DAG P G NI +
Sbjct: 21 SNTPALRVIPLGGLHEIGKNTCVFEYGDELMLVDAGLAFPSDGMHGVNIVM 71
>gi|225873096|ref|YP_002754555.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum
ATCC 51196]
gi|225792097|gb|ACO32187.1| metallo-beta-lactamase family protein [Acidobacterium capsulatum
ATCC 51196]
Length = 553
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+NG L+++P+GGLGE GMNCM + D ++IDAG
Sbjct: 2 TNGK-LQIIPLGGLGEFGMNCMALRWQDDIVVIDAG 36
>gi|404492235|ref|YP_006716341.1| metal-dependent hydrolase [Pelobacter carbinolicus DSM 2380]
gi|77544342|gb|ABA87904.1| metal-dependent hydrolase, beta-lactamase superfamily [Pelobacter
carbinolicus DSM 2380]
Length = 564
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Query: 39 PP--LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PP +R+LP+GGLGEIG+N M+V D ++ID G
Sbjct: 13 PPEAVRILPLGGLGEIGLNMMVVEYRDELLIIDCG 47
>gi|193875754|gb|ACF24513.1| myb domain containing transcription regulator [Gymnochlora
stellata]
Length = 552
Score = 42.0 bits (97), Expect = 0.095, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 49 LGEIGMNCMLVGNYDRYILIDAG 71
LGEIGMNCML+G +++I+IDAG
Sbjct: 3 LGEIGMNCMLIGENNKFIIIDAG 25
>gi|291458554|ref|ZP_06597944.1| metallo-beta-lactamase family protein [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291419087|gb|EFE92806.1| metallo-beta-lactamase family protein [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 615
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 10 RTGRTEGPRKSMEDSVQRKMEQFYEGSN---GPPLRVLPIGGLGEIGMNCMLVGNYDRYI 66
RTG +S E +R+ EQ +G+ G +RV+P+GGL +IGMN + + I
Sbjct: 32 RTGGRADRTRSAEHGGRRQTEQQTKGARAGAGGSVRVIPLGGLDQIGMNITAIETEESLI 91
Query: 67 LIDAG 71
++D G
Sbjct: 92 IVDCG 96
>gi|123969393|ref|YP_001010251.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus
marinus str. AS9601]
gi|123199503|gb|ABM71144.1| Predicted hydrolase of the metallo-beta-lactamase superfamily
[Prochlorococcus marinus str. AS9601]
Length = 662
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 19 KSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGD--PGFG 76
+S DS + K SN P LRV+P+GGL EIG N + D +L+DAG P G
Sbjct: 11 RSTHDSSRSK-------SNTPALRVIPLGGLHEIGKNTCVFEYGDELMLVDAGLAFPSDG 63
Query: 77 FQYTNICI 84
N+ +
Sbjct: 64 MHGVNVVM 71
>gi|229827982|ref|ZP_04454051.1| hypothetical protein GCWU000342_00030 [Shuttleworthia satelles DSM
14600]
gi|229792576|gb|EEP28690.1| hypothetical protein GCWU000342_00030 [Shuttleworthia satelles DSM
14600]
Length = 642
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 2 RESKV--PRR--RTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCM 57
+ES+ PRR R +TE +S V+ + + +NGP ++++P+GGLG+IGMN
Sbjct: 54 KESRTTAPRRSTRPRKTEMQDQSDLPQVKSARGRGRKKANGPTVKIIPLGGLGQIGMNIT 113
Query: 58 LVGNYDRYILIDAG 71
+ I++D G
Sbjct: 114 AFEYGNDIIVVDCG 127
>gi|284044691|ref|YP_003395031.1| beta-lactamase [Conexibacter woesei DSM 14684]
gi|283948912|gb|ADB51656.1| beta-lactamase domain protein [Conexibacter woesei DSM 14684]
Length = 556
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+G LRVLP+GGLGEIG N +V DR +++D G
Sbjct: 2 SGGTLRVLPLGGLGEIGKNMTVVEYDDRIVVVDTG 36
>gi|347734086|ref|ZP_08867138.1| metallo-beta-lactamase superfamily protein [Desulfovibrio sp. A2]
gi|347517178|gb|EGY24371.1| metallo-beta-lactamase superfamily protein [Desulfovibrio sp. A2]
Length = 553
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L + P+GGLGEIG+NC + D +L+D G
Sbjct: 6 PHLTITPLGGLGEIGLNCQIWSTPDSMVLVDCG 38
>gi|239908431|ref|YP_002955173.1| hypothetical protein DMR_37960 [Desulfovibrio magneticus RS-1]
gi|239798298|dbj|BAH77287.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 551
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ P + + P+GGLGEIG+NCM + + D I++D G
Sbjct: 2 TGSPAVTLYPLGGLGEIGLNCMALVSGDSMIVVDCG 37
>gi|410463033|ref|ZP_11316575.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Desulfovibrio magneticus str. Maddingley MBC34]
gi|409983855|gb|EKO40202.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Desulfovibrio magneticus str. Maddingley MBC34]
Length = 551
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ P + + P+GGLGEIG+NCM + + D I++D G
Sbjct: 2 TGSPAVTLYPLGGLGEIGLNCMALVSGDSMIVVDCG 37
>gi|261367048|ref|ZP_05979931.1| metallo-beta-lactamase family protein [Subdoligranulum variabile
DSM 15176]
gi|282571168|gb|EFB76703.1| hypothetical protein SUBVAR_05080 [Subdoligranulum variabile DSM
15176]
Length = 662
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 6 VPRRRTGRTEGPR---------KSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNC 56
VP R+ R+ GP+ K+ +++ + YE + P+ + P+GGLGE+G N
Sbjct: 68 VPAPRSRRSRGPQGQNNATAANKTQTRRGRKQQARGYEMTPAIPMHICPLGGLGEVGKNI 127
Query: 57 MLVGNYDRYILIDAG 71
L IL+D G
Sbjct: 128 TLYECQGDMILVDCG 142
>gi|116749032|ref|YP_845719.1| beta-lactamase domain-containing protein [Syntrophobacter
fumaroxidans MPOB]
gi|116698096|gb|ABK17284.1| beta-lactamase domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 561
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 29 MEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
M Q E L+++P+GGLGEIG+N M++ D ++IDAG
Sbjct: 1 MMQKQEDVQPSALKIIPLGGLGEIGLNMMVLEYEDTIVVIDAG 43
>gi|197120523|ref|YP_002132474.1| beta-lactamase [Anaeromyxobacter sp. K]
gi|196170372|gb|ACG71345.1| beta-lactamase domain protein [Anaeromyxobacter sp. K]
Length = 546
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R++P+GGLGEIGMNCM V R ++D G
Sbjct: 1 MRIVPLGGLGEIGMNCMAVECDGRIAVVDCG 31
>gi|220915234|ref|YP_002490538.1| beta-lactamase domain-containing protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219953088|gb|ACL63472.1| beta-lactamase domain protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 546
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R++P+GGLGEIGMNCM V R ++D G
Sbjct: 1 MRIVPLGGLGEIGMNCMAVECDGRIAVVDCG 31
>gi|291569899|dbj|BAI92171.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 615
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 23 DSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
D+V + EQ E N P L+++P+GGL EIG N + D I++DAG
Sbjct: 8 DNVPKNREQTPE-DNSPKLKIIPLGGLHEIGKNTCVFEYEDEIIILDAG 55
>gi|218888010|ref|YP_002437331.1| beta-lactamase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758964|gb|ACL09863.1| beta-lactamase domain protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 553
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L + P+GGLGEIG+NC + D +L+D G
Sbjct: 6 PHLTITPLGGLGEIGLNCQIWSTPDSMVLVDCG 38
>gi|409993300|ref|ZP_11276446.1| hypothetical protein APPUASWS_19367 [Arthrospira platensis str.
Paraca]
gi|409935835|gb|EKN77353.1| hypothetical protein APPUASWS_19367 [Arthrospira platensis str.
Paraca]
Length = 632
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 23 DSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
D+V + EQ E N P L+++P+GGL EIG N + D I++DAG
Sbjct: 25 DNVPKNREQTPE-DNSPKLKIIPLGGLHEIGKNTCVFEYEDEIIILDAG 72
>gi|291456206|ref|ZP_06595596.1| metallo-beta-lactamase family protein [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|417942792|ref|ZP_12586054.1| Metallo-beta-lactamase family protein [Bifidobacterium breve CECT
7263]
gi|291381483|gb|EFE89001.1| metallo-beta-lactamase family protein [Bifidobacterium breve DSM
20213 = JCM 1192]
gi|376166511|gb|EHS85412.1| Metallo-beta-lactamase family protein [Bifidobacterium breve CECT
7263]
Length = 618
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
S+ P R+ T+ +D+V ++ +GS +R+ P+GGLGEIG N ++
Sbjct: 32 SRTPSRKINATQQATAPQQDAVLIAPPKYRKGS----MRITPLGGLGEIGRNMNVIEYNG 87
Query: 64 RYILIDAG 71
+LID G
Sbjct: 88 HLLLIDCG 95
>gi|384197451|ref|YP_005583195.1| hypothetical protein HMPREF9228_1387 [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|333110057|gb|AEF27073.1| conserved hypothetical protein [Bifidobacterium breve
ACS-071-V-Sch8b]
Length = 618
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
S+ P R+ T+ +D+V ++ +GS +R+ P+GGLGEIG N ++
Sbjct: 32 SRTPSRKINATQQATAPQQDAVLIAPPKYRKGS----MRITPLGGLGEIGRNMNVIEYNG 87
Query: 64 RYILIDAG 71
+LID G
Sbjct: 88 HLLLIDCG 95
>gi|256545150|ref|ZP_05472516.1| metallo-beta-lactamase family protein [Anaerococcus vaginalis
ATCC 51170]
gi|256399191|gb|EEU12802.1| metallo-beta-lactamase family protein [Anaerococcus vaginalis
ATCC 51170]
Length = 556
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+V+P+GGLGEIG NC +V + I+ID G
Sbjct: 5 LKVIPLGGLGEIGKNCTIVEYKNEMIMIDCG 35
>gi|120603149|ref|YP_967549.1| beta-lactamase domain-containing protein [Desulfovibrio vulgaris
DP4]
gi|120563378|gb|ABM29122.1| beta-lactamase domain protein [Desulfovibrio vulgaris DP4]
Length = 554
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ P + P+GGLGEIG+NC + D +LID G
Sbjct: 4 HAPHFTITPLGGLGEIGLNCQVWSTADSTVLIDCG 38
>gi|300866440|ref|ZP_07111132.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300335544|emb|CBN56292.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 620
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 25 VQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGD--PGFGFQYTNI 82
++ M + + S+ P L+++P+GGL EIG N + D IL+DAG P G NI
Sbjct: 14 LKDSMMRMTKNSSEPTLKIIPLGGLHEIGKNTCVFEYEDEIILLDAGLAFPSDGMHGVNI 73
Query: 83 CI 84
+
Sbjct: 74 VL 75
>gi|46579289|ref|YP_010097.1| metallo-beta-lactamase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387152673|ref|YP_005701609.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio vulgaris
RCH1]
gi|46448703|gb|AAS95356.1| metallo-beta-lactamase family protein [Desulfovibrio vulgaris
str. Hildenborough]
gi|311233117|gb|ADP85971.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio vulgaris
RCH1]
Length = 554
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ P + P+GGLGEIG+NC + D +LID G
Sbjct: 4 HAPHFTITPLGGLGEIGLNCQVWSTADSTVLIDCG 38
>gi|212696189|ref|ZP_03304317.1| hypothetical protein ANHYDRO_00725 [Anaerococcus hydrogenalis DSM
7454]
gi|212676818|gb|EEB36425.1| hypothetical protein ANHYDRO_00725 [Anaerococcus hydrogenalis DSM
7454]
Length = 558
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+V+P+GGLGEIG NC +V + I+ID G
Sbjct: 7 LKVIPLGGLGEIGKNCTVVEYKNEMIMIDCG 37
>gi|325846725|ref|ZP_08169640.1| hypothetical protein HMPREF9246_0645 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481483|gb|EGC84524.1| hypothetical protein HMPREF9246_0645 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 558
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+V+P+GGLGEIG NC +V + I+ID G
Sbjct: 7 LKVIPLGGLGEIGKNCTVVEYKNEMIMIDCG 37
>gi|227484978|ref|ZP_03915294.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus
lactolyticus ATCC 51172]
gi|227237133|gb|EEI87148.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus
lactolyticus ATCC 51172]
Length = 558
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+N LR++PIGGL E+G NC LV + I+ID G
Sbjct: 2 TNEKKLRIIPIGGLHEVGKNCALVEYGNDMIMIDCG 37
>gi|294790514|ref|ZP_06755672.1| metallo-beta-lactamase family protein [Scardovia inopinata F0304]
gi|294458411|gb|EFG26764.1| metallo-beta-lactamase family protein [Scardovia inopinata F0304]
Length = 612
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 12/72 (16%)
Query: 8 RRRTGRTEGPRKSMEDSVQRKMEQ--------FYEGSNGPPLRVLPIGGLGEIGMNCMLV 59
R+ GR+ G RK+ + Q ++ +++GS +R++P+GGLGEIG N ++
Sbjct: 23 RKGNGRSHGGRKTAPAAAQTVAQEGKLVAPPKYHKGS----MRIVPLGGLGEIGRNMNVI 78
Query: 60 GNYDRYILIDAG 71
+LID G
Sbjct: 79 EYNGHILLIDCG 90
>gi|296453655|ref|YP_003660798.1| beta-lactamase domain-containing protein [Bifidobacterium longum
subsp. longum JDM301]
gi|384202019|ref|YP_005587766.1| beta-lactamase domain-containing protein [Bifidobacterium longum
subsp. longum KACC 91563]
gi|291517280|emb|CBK70896.1| Predicted hydrolase of the metallo-beta-lactamase superfamily
[Bifidobacterium longum subsp. longum F8]
gi|296183086|gb|ADG99967.1| beta-lactamase domain protein [Bifidobacterium longum subsp.
longum JDM301]
gi|338755026|gb|AEI98015.1| beta-lactamase domain-containing protein [Bifidobacterium longum
subsp. longum KACC 91563]
Length = 616
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
S+ P R+ T +D+V ++ +GS +R+ P+GGLGEIG N ++
Sbjct: 30 SRTPSRKINATRQATAPQQDAVLIAPPKYRKGS----MRITPLGGLGEIGRNMNVIEYNG 85
Query: 64 RYILIDAG 71
+LID G
Sbjct: 86 HLLLIDCG 93
>gi|167525833|ref|XP_001747251.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774546|gb|EDQ88175.1| predicted protein [Monosiga brevicollis MX1]
Length = 806
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 18/83 (21%)
Query: 44 LPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGFQYTNICIFIYNGEFNIQQIDESPLDG 103
+P+GG G++GMNC L G +++++ID G F F+ +G +G
Sbjct: 115 VPLGGCGQVGMNCSLFGYQNKWLMIDYG-MMFDFE---------SGALGA--------NG 156
Query: 104 KVFDREALEELSKEGVTLVIKNG 126
V D +EE K+ V LV+ +G
Sbjct: 157 YVADTTFIEERKKDLVALVVTHG 179
>gi|46191137|ref|ZP_00120594.2| COG0595: Predicted hydrolase of the metallo-beta-lactamase
superfamily [Bifidobacterium longum DJO10A]
gi|189439813|ref|YP_001954894.1| metallo-beta-lactamase superfamily hydrolase [Bifidobacterium
longum DJO10A]
gi|317482566|ref|ZP_07941581.1| metallo-beta-lactamase superfamily protein [Bifidobacterium sp.
12_1_47BFAA]
gi|322688625|ref|YP_004208359.1| hypothetical protein BLIF_0437 [Bifidobacterium longum subsp.
infantis 157F]
gi|419848670|ref|ZP_14371763.1| hypothetical protein HMPREF1313_0293 [Bifidobacterium longum
subsp. longum 1-6B]
gi|419854466|ref|ZP_14377254.1| hypothetical protein HMPREF1312_0188 [Bifidobacterium longum
subsp. longum 44B]
gi|189428248|gb|ACD98396.1| Putative metallo-beta-lactamase superfamily hydrolase
[Bifidobacterium longum DJO10A]
gi|316915988|gb|EFV37395.1| metallo-beta-lactamase superfamily protein [Bifidobacterium sp.
12_1_47BFAA]
gi|320459961|dbj|BAJ70581.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
gi|386407203|gb|EIJ22183.1| hypothetical protein HMPREF1313_0293 [Bifidobacterium longum
subsp. longum 1-6B]
gi|386417806|gb|EIJ32278.1| hypothetical protein HMPREF1312_0188 [Bifidobacterium longum
subsp. longum 44B]
Length = 616
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
S+ P R+ T +D+V ++ +GS +R+ P+GGLGEIG N ++
Sbjct: 30 SRTPSRKINATRQATAPQQDAVLIAPPKYRKGS----MRITPLGGLGEIGRNMNVIEYNG 85
Query: 64 RYILIDAG 71
+LID G
Sbjct: 86 HLLLIDCG 93
>gi|322690611|ref|YP_004220181.1| hypothetical protein BLLJ_0420 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|419851195|ref|ZP_14374147.1| hypothetical protein HMPREF1314_0499 [Bifidobacterium longum
subsp. longum 35B]
gi|419852849|ref|ZP_14375702.1| hypothetical protein HMPREF1315_1834 [Bifidobacterium longum
subsp. longum 2-2B]
gi|320455467|dbj|BAJ66089.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
gi|386406890|gb|EIJ21883.1| hypothetical protein HMPREF1314_0499 [Bifidobacterium longum
subsp. longum 35B]
gi|386409544|gb|EIJ24386.1| hypothetical protein HMPREF1315_1834 [Bifidobacterium longum
subsp. longum 2-2B]
Length = 616
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
S+ P R+ T +D+V ++ +GS +R+ P+GGLGEIG N ++
Sbjct: 30 SRTPSRKINATRQATAPQQDAVLIAPPKYRKGS----MRITPLGGLGEIGRNMNVIEYNG 85
Query: 64 RYILIDAG 71
+LID G
Sbjct: 86 HLLLIDCG 93
>gi|227546371|ref|ZP_03976420.1| possible metal-dependent hydrolase [Bifidobacterium longum subsp.
longum ATCC 55813]
gi|239622374|ref|ZP_04665405.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|227213352|gb|EEI81224.1| possible metal-dependent hydrolase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|239514371|gb|EEQ54238.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 630
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
S+ P R+ T +D+V ++ +GS +R+ P+GGLGEIG N ++
Sbjct: 44 SRTPSRKINATRQATAPQQDAVLIAPPKYRKGS----MRITPLGGLGEIGRNMNVIEYNG 99
Query: 64 RYILIDAG 71
+LID G
Sbjct: 100 HLLLIDCG 107
>gi|23465758|ref|NP_696361.1| hypothetical protein BL1192 [Bifidobacterium longum NCC2705]
gi|23326444|gb|AAN24997.1| widely conserved hypothetical protein with metallo-beta-lactamase
domain [Bifidobacterium longum NCC2705]
Length = 637
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
S+ P R+ T +D+V ++ +GS +R+ P+GGLGEIG N ++
Sbjct: 51 SRTPSRKINATRQATAPQQDAVLIAPPKYRKGS----MRITPLGGLGEIGRNMNVIEYNG 106
Query: 64 RYILIDAG 71
+LID G
Sbjct: 107 HLLLIDCG 114
>gi|384200115|ref|YP_005585858.1| hypothetical protein [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|320459067|dbj|BAJ69688.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 616
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
S+ P R+ T +D+V ++ +GS +R+ P+GGLGEIG N ++
Sbjct: 30 SRTPSRKINATRQATAPQQDAVLIAPPKYRKGS----MRITPLGGLGEIGRNMNVIEYNG 85
Query: 64 RYILIDAG 71
+LID G
Sbjct: 86 HLLLIDCG 93
>gi|312133218|ref|YP_004000557.1| metallo-beta-lactamase superfamily hydrolase [Bifidobacterium
longum subsp. longum BBMN68]
gi|311772419|gb|ADQ01907.1| Putative metallo-Beta-lactamase superfamily hydrolase
[Bifidobacterium longum subsp. longum BBMN68]
Length = 616
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYD 63
S+ P R+ T +D+V ++ +GS +R+ P+GGLGEIG N ++
Sbjct: 30 SRTPSRKINATRQATAPQQDAVLIAPPKYRKGS----MRITPLGGLGEIGRNMNVIEYNG 85
Query: 64 RYILIDAG 71
+LID G
Sbjct: 86 HLLLIDCG 93
>gi|347754195|ref|YP_004861759.1| putative metallo-beta-lactamase superfamily hydrolase [Candidatus
Chloracidobacterium thermophilum B]
gi|347586713|gb|AEP11243.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Candidatus Chloracidobacterium thermophilum B]
Length = 557
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L ++P+GGLGE GMNCM++ I+IDAG
Sbjct: 8 LEIIPLGGLGEFGMNCMVLRYGADIIVIDAG 38
>gi|392412445|ref|YP_006449052.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Desulfomonile tiedjei DSM 6799]
gi|390625581|gb|AFM26788.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Desulfomonile tiedjei DSM 6799]
Length = 562
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LRVLP+GGLGEIG+N M+V +IDAG
Sbjct: 5 LRVLPLGGLGEIGLNMMIVSYGRDAFIIDAG 35
>gi|338529943|ref|YP_004663277.1| metallo-beta-lactamase family protein [Myxococcus fulvus HW-1]
gi|337256039|gb|AEI62199.1| metallo-beta-lactamase family protein [Myxococcus fulvus HW-1]
Length = 546
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+V+P+GGLGEIG+N M++ +LIDAG
Sbjct: 2 LQVIPLGGLGEIGLNSMVIACRGELLLIDAG 32
>gi|428211851|ref|YP_007084995.1| hypothetical protein Oscil6304_1365 [Oscillatoria acuminata PCC
6304]
gi|428000232|gb|AFY81075.1| hypothetical protein Oscil6304_1365 [Oscillatoria acuminata PCC
6304]
Length = 615
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 35 GSN--GPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
GSN GP L+++P+GGL EIG N + D IL+DAG
Sbjct: 24 GSNVSGPTLKIIPLGGLHEIGKNTCVFEFEDEIILVDAG 62
>gi|126697180|ref|YP_001092066.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus
marinus str. MIT 9301]
gi|126544223|gb|ABO18465.1| Predicted hydrolase of the metallo-beta-lactamase superfamily
[Prochlorococcus marinus str. MIT 9301]
Length = 661
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 19 KSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG--DPGFG 76
+S DS + K SN P LRV+P+GGL EIG N + + +L+DAG P G
Sbjct: 11 RSTHDSSRSK-------SNTPALRVIPLGGLHEIGKNTCVFEYGEELMLVDAGLAFPSDG 63
Query: 77 FQYTNICI 84
N+ +
Sbjct: 64 MHGVNVVM 71
>gi|88608757|ref|YP_506699.1| metallo-beta-lactamase family protein [Neorickettsia sennetsu
str. Miyayama]
gi|88600926|gb|ABD46394.1| metallo-beta-lactamase family, beta-CASP subfamily [Neorickettsia
sennetsu str. Miyayama]
Length = 542
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G R+I+ID G
Sbjct: 6 LIFLPLGGTGEIGMNVTLYGYKGRWIMIDCG 36
>gi|423065160|ref|ZP_17053950.1| beta-lactamase domain protein [Arthrospira platensis C1]
gi|406713292|gb|EKD08463.1| beta-lactamase domain protein [Arthrospira platensis C1]
Length = 615
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 23 DSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
D++ + EQ E N P L+++P+GGL EIG N + D I++DAG
Sbjct: 8 DNLPKNREQTPE-DNSPKLKIIPLGGLHEIGKNTCVFEYEDEIIILDAG 55
>gi|209525651|ref|ZP_03274189.1| beta-lactamase domain protein [Arthrospira maxima CS-328]
gi|209493984|gb|EDZ94301.1| beta-lactamase domain protein [Arthrospira maxima CS-328]
Length = 621
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 23 DSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
D++ + EQ E N P L+++P+GGL EIG N + D I++DAG
Sbjct: 14 DNLPKNREQTPE-DNSPKLKIIPLGGLHEIGKNTCVFEYEDEIIILDAG 61
>gi|78043054|ref|YP_360002.1| metallo-beta-lactamase [Carboxydothermus hydrogenoformans Z-2901]
gi|77995169|gb|ABB14068.1| metallo-beta-lactamase family protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 554
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG N M++ D I+IDAG
Sbjct: 8 LQIIPLGGLGEIGKNMMVIKYNDAIIVIDAG 38
>gi|405355441|ref|ZP_11024667.1| Zn-dependent hydrolase [Chondromyces apiculatus DSM 436]
gi|397091783|gb|EJJ22585.1| Zn-dependent hydrolase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 546
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L V+P+GGLGEIG+N M++ +LIDAG
Sbjct: 2 LHVIPLGGLGEIGLNSMVIACRGEMLLIDAG 32
>gi|108758638|ref|YP_629736.1| metallo-beta-lactamase [Myxococcus xanthus DK 1622]
gi|108462518|gb|ABF87703.1| metallo-beta-lactamase family protein [Myxococcus xanthus DK
1622]
Length = 546
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L V+P+GGLGEIG+N M++ +LIDAG
Sbjct: 2 LHVIPLGGLGEIGLNSMVIACRGEMLLIDAG 32
>gi|392375664|ref|YP_003207497.1| ribonuclease J 1 (RNase J1) [Candidatus Methylomirabilis oxyfera]
gi|258593357|emb|CBE69696.1| Ribonuclease J 1 (RNase J1) [Candidatus Methylomirabilis oxyfera]
Length = 548
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R++P+GGLGEIG+N +V D ++IDAG
Sbjct: 1 MRIVPLGGLGEIGLNMTVVETEDDLLVIDAG 31
>gi|254526119|ref|ZP_05138171.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9202]
gi|221537543|gb|EEE39996.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9202]
Length = 657
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 23 DSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG--DPGFGFQYT 80
+ ++ ++Q +N P L+++P+GGL EIG N + D ILID G P G
Sbjct: 4 NQIKSNIKQAQTKTNSPCLKIIPLGGLHEIGKNTCVFEYGDDIILIDGGLAFPSDGMHGV 63
Query: 81 NICI 84
N+ +
Sbjct: 64 NVVM 67
>gi|157414258|ref|YP_001485124.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus
marinus str. MIT 9215]
gi|157388833|gb|ABV51538.1| Predicted hydrolase of the metallo-beta-lactamase superfamily
[Prochlorococcus marinus str. MIT 9215]
Length = 657
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 23 DSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG--DPGFGFQYT 80
+ ++ ++Q +N P L+++P+GGL EIG N + D ILID G P G
Sbjct: 4 NQIKSNIKQAQTKTNSPCLKIIPLGGLHEIGKNTCVFEYGDDIILIDGGLAFPSDGMHGV 63
Query: 81 NICI 84
N+ +
Sbjct: 64 NVVM 67
>gi|167630475|ref|YP_001680974.1| metallo-beta-lactamase family protein [Heliobacterium
modesticaldum Ice1]
gi|167593215|gb|ABZ84963.1| metallo-beta-lactamase family protein, putative [Heliobacterium
modesticaldum Ice1]
Length = 573
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGFQYTNICIFIYNGEFNIQQ 95
SN P + V+P+GG+GE+G N +++ D I+ID+G G + I + I + + +Q
Sbjct: 22 SNLPTVSVIPLGGVGEVGKNMLVIEYGDDIIVIDSGVKFPGEELLGIDLVIPDITYLVQN 81
Query: 96 ID 97
D
Sbjct: 82 AD 83
>gi|376294809|ref|YP_005166039.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio
desulfuricans ND132]
gi|323457370|gb|EGB13235.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio
desulfuricans ND132]
Length = 551
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 38 GPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG-----DPGFGFQYTNIC 83
G + P+GGLGEIGMNCML +++D G D FG C
Sbjct: 3 GTSFTLYPLGGLGEIGMNCMLYRTEKSLVMVDCGLMFPEDYHFGVDVVIPC 53
>gi|312879542|ref|ZP_07739342.1| RNA-metabolising metallo-beta-lactamase [Aminomonas paucivorans DSM
12260]
gi|310782833|gb|EFQ23231.1| RNA-metabolising metallo-beta-lactamase [Aminomonas paucivorans DSM
12260]
Length = 593
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 74 GFGFQYTNICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
GF + T + + ++ G+F ++D +P+DG++ D A EL KEGV L++ +
Sbjct: 172 GFAIR-TPVGLVVHTGDF---KLDATPIDGRITDYSAFAELGKEGVLLLLSD 219
>gi|428218959|ref|YP_007103424.1| Ribocuclease J [Pseudanabaena sp. PCC 7367]
gi|427990741|gb|AFY70996.1| Ribocuclease J [Pseudanabaena sp. PCC 7367]
Length = 611
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGD--PGFGFQYTNICI 84
S+ P L+++P+GGL EIG N + D +L+D G PG G NI +
Sbjct: 5 SDSPALKIIPLGGLKEIGKNTWVFEINDEIMLLDGGLGFPGDGMHGVNIVL 55
>gi|383453397|ref|YP_005367386.1| metallo-beta-lactamase family protein [Corallococcus coralloides
DSM 2259]
gi|380728023|gb|AFE04025.1| metallo-beta-lactamase family protein [Corallococcus coralloides
DSM 2259]
Length = 546
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L V+P+GGLGEIG+N M++ +LIDAG
Sbjct: 2 LHVIPLGGLGEIGLNAMVLACRGEMLLIDAG 32
>gi|310819554|ref|YP_003951912.1| metallo-beta-lactamase family protein [Stigmatella aurantiaca
DW4/3-1]
gi|309392626|gb|ADO70085.1| Metallo-beta-lactamase family protein [Stigmatella aurantiaca
DW4/3-1]
Length = 546
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L V+P+GGLGEIG+N M++ +LIDAG
Sbjct: 2 LHVIPLGGLGEIGLNAMVLACRGEMLLIDAG 32
>gi|251773185|gb|EES53738.1| Metallo-beta-lactamase family protein [Leptospirillum
ferrodiazotrophum]
Length = 580
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
S+G L+++P+GGLGE+GMN + R I++D G
Sbjct: 27 SSGSSLKIIPLGGLGEVGMNMTVYETEGRIIVVDCG 62
>gi|303247589|ref|ZP_07333860.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio
fructosovorans JJ]
gi|302491069|gb|EFL50963.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio
fructosovorans JJ]
Length = 551
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P + + P+GGLGEIG+NCM + + + I++D G
Sbjct: 5 PAVTLYPLGGLGEIGLNCMALVSGESMIVVDCG 37
>gi|297617212|ref|YP_003702371.1| RNA-metabolising metallo-beta-lactamase [Syntrophothermus
lipocalidus DSM 12680]
gi|297145049|gb|ADI01806.1| RNA-metabolising metallo-beta-lactamase [Syntrophothermus
lipocalidus DSM 12680]
Length = 554
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 43 VLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
V+P+GGLGEIG N MLV D ++IDAG
Sbjct: 10 VIPLGGLGEIGKNMMLVRYQDNIVVIDAG 38
>gi|169838044|ref|ZP_02871232.1| metallo-beta-lactamase family protein, putative [candidate division
TM7 single-cell isolate TM7a]
Length = 486
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 36 SNGPPLRVLPIGGLGEIGM-NCMLVGNYDRYILIDAGDPGFGF 77
S GP L+V+PIGGLGE+G+ M+ YD ILI D GF F
Sbjct: 90 SQGPKLKVMPIGGLGEMGIGKNMMAIEYDNEILII--DMGFLF 130
>gi|167957347|ref|ZP_02544421.1| predicted hydrolase [candidate division TM7 single-cell isolate
TM7c]
Length = 412
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 36 SNGPPLRVLPIGGLGEIGM-NCMLVGNYDRYILIDAGDPGFGF 77
S GP L+V+PIGGLGE+G+ M+ YD ILI D GF F
Sbjct: 90 SQGPKLKVMPIGGLGEMGIGKNMMAIEYDNEILII--DMGFLF 130
>gi|262068265|ref|ZP_06027877.1| metallo-beta-lactamase family protein [Fusobacterium periodonticum
ATCC 33693]
gi|291378003|gb|EFE85521.1| metallo-beta-lactamase family protein [Fusobacterium periodonticum
ATCC 33693]
Length = 634
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC +V D I+IDAG
Sbjct: 81 MYVIPLGGLEEVGKNCTIVQYKDEIIIIDAG 111
>gi|422317053|ref|ZP_16398422.1| hypothetical protein FPOG_01752 [Fusobacterium periodonticum D10]
gi|404590270|gb|EKA92720.1| hypothetical protein FPOG_01752 [Fusobacterium periodonticum D10]
Length = 640
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC +V D I+IDAG
Sbjct: 87 MYVIPLGGLEEVGKNCTIVQYKDEIIIIDAG 117
>gi|340752540|ref|ZP_08689339.1| metal dependent hydrolase [Fusobacterium sp. 2_1_31]
gi|340567305|gb|EEO37385.2| metal dependent hydrolase [Fusobacterium sp. 2_1_31]
Length = 640
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC +V D I+IDAG
Sbjct: 87 MYVIPLGGLEEVGKNCTIVQYKDEIIIIDAG 117
>gi|227499545|ref|ZP_03929652.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus
tetradius ATCC 35098]
gi|227218304|gb|EEI83558.1| metallo-beta lactamase superfamily hydrolase [Anaerococcus
tetradius ATCC 35098]
Length = 568
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N LR++P+GGL E+G NC LV + I+ID G
Sbjct: 11 NDKKLRIIPLGGLQEVGKNCTLVEYGNDMIMIDCG 45
>gi|408419098|ref|YP_006760512.1| ribonuclease J 1 [Desulfobacula toluolica Tol2]
gi|405106311|emb|CCK79808.1| predicted ribonuclease J 1 [Desulfobacula toluolica Tol2]
Length = 549
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG+N M++ D +IDAG
Sbjct: 2 LKIIPLGGLGEIGLNMMVIEYDDVIFIIDAG 32
>gi|358466358|ref|ZP_09176188.1| hypothetical protein HMPREF9093_00658 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069108|gb|EHI79056.1| hypothetical protein HMPREF9093_00658 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 1274
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC +V D I+IDAG
Sbjct: 721 MYVIPLGGLEEVGKNCTIVQYKDEIIIIDAG 751
>gi|428307447|ref|YP_007144272.1| Ribocuclease J [Crinalium epipsammum PCC 9333]
gi|428248982|gb|AFZ14762.1| Ribocuclease J [Crinalium epipsammum PCC 9333]
Length = 600
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 25 VQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ +KM GS P L+++P+GGL EIG N + D IL+DAG
Sbjct: 8 ITKKMANTNNGSQ-PSLKIIPLGGLHEIGKNTCVFEFNDEIILLDAG 53
>gi|374312592|ref|YP_005059022.1| beta-lactamase [Granulicella mallensis MP5ACTX8]
gi|358754602|gb|AEU37992.1| beta-lactamase domain protein [Granulicella mallensis MP5ACTX8]
Length = 553
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGE GMNC+ + D ++IDAG
Sbjct: 6 LQMIPLGGLGEFGMNCLALRFGDDILVIDAG 36
>gi|397170054|ref|ZP_10493480.1| RNA-metabolising metallo-beta-lactamase [Alishewanella aestuarii
B11]
gi|396088260|gb|EJI85844.1| RNA-metabolising metallo-beta-lactamase [Alishewanella aestuarii
B11]
Length = 460
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ R++++D G
Sbjct: 17 LWFLPLGGCGEIGMNLNLYGHAGRWLMVDCG 47
>gi|294782585|ref|ZP_06747911.1| metallo-beta-lactamase family protein [Fusobacterium sp. 1_1_41FAA]
gi|294481226|gb|EFG29001.1| metallo-beta-lactamase family protein [Fusobacterium sp. 1_1_41FAA]
Length = 626
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC +V D I+IDAG
Sbjct: 73 MYVIPLGGLEEVGKNCTIVQYKDEIIIIDAG 103
>gi|256830142|ref|YP_003158870.1| beta-lactamase domain-containing protein [Desulfomicrobium
baculatum DSM 4028]
gi|256579318|gb|ACU90454.1| beta-lactamase domain protein [Desulfomicrobium baculatum DSM
4028]
Length = 550
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 45 PIGGLGEIGMNCMLVGNYDRYILIDAG 71
P+GGLGEIGMNCM + IL+D G
Sbjct: 10 PLGGLGEIGMNCMALETEQSMILVDCG 36
>gi|375111364|ref|ZP_09757574.1| RNA-metabolising metallo-beta-lactamase [Alishewanella jeotgali
KCTC 22429]
gi|374568540|gb|EHR39713.1| RNA-metabolising metallo-beta-lactamase [Alishewanella jeotgali
KCTC 22429]
Length = 460
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ R++++D G
Sbjct: 17 LWFLPLGGCGEIGMNLNLYGHAGRWLMVDCG 47
>gi|393762384|ref|ZP_10351011.1| RNA-metabolising metallo-beta-lactamase [Alishewanella agri BL06]
gi|392606619|gb|EIW89503.1| RNA-metabolising metallo-beta-lactamase [Alishewanella agri BL06]
Length = 460
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ R++++D G
Sbjct: 17 LWFLPLGGCGEIGMNLNLYGHAGRWLMVDCG 47
>gi|257066434|ref|YP_003152690.1| beta-lactamase domain-containing protein [Anaerococcus prevotii
DSM 20548]
gi|256798314|gb|ACV28969.1| beta-lactamase domain protein [Anaerococcus prevotii DSM 20548]
Length = 560
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N LR++P+GGL E+G NC LV + I+ID G
Sbjct: 3 NDKKLRIIPLGGLQEVGKNCTLVEYGNDMIMIDCG 37
>gi|383935642|ref|ZP_09989076.1| beta-lactamase domain-containing protein [Rheinheimera
nanhaiensis E407-8]
gi|383703211|dbj|GAB59167.1| beta-lactamase domain-containing protein [Rheinheimera
nanhaiensis E407-8]
Length = 474
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ R++++D G
Sbjct: 29 LWFLPLGGCGEIGMNLNLYGHAGRWLMVDCG 59
>gi|88797891|ref|ZP_01113479.1| metallo-beta-lactamase family protein [Reinekea blandensis
MED297]
gi|88779568|gb|EAR10755.1| metallo-beta-lactamase family protein [Reinekea sp. MED297]
Length = 450
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 29 MEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
M GS L LP+GG GEIGMN L G+ D ++++D G
Sbjct: 1 MSTLLPGSKD--LYFLPLGGTGEIGMNMNLYGHDDHWLMVDCG 41
>gi|374301140|ref|YP_005052779.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio africanus
str. Walvis Bay]
gi|332554076|gb|EGJ51120.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio africanus
str. Walvis Bay]
Length = 554
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 45 PIGGLGEIGMNCMLVGNYDRYILIDAG 71
P+GGLGEIG+NCM++ D I+ID G
Sbjct: 12 PLGGLGEIGLNCMVLECGDSMIMIDCG 38
>gi|384248483|gb|EIE21967.1| Metallo-hydrolase/oxidoreductase [Coccomyxa subellipsoidea C-169]
Length = 662
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 95 QIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+IDE P+DG FDR E +SKEGV L + +
Sbjct: 147 KIDEDPMDGDKFDRNTFEAVSKEGVALFMSD 177
>gi|217967537|ref|YP_002353043.1| beta-lactamase domain-containing protein [Dictyoglomus turgidum
DSM 6724]
gi|217336636|gb|ACK42429.1| beta-lactamase domain protein [Dictyoglomus turgidum DSM 6724]
Length = 548
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+V+PIGG GEIG N +L+ D I+IDAG
Sbjct: 5 LKVIPIGGFGEIGKNMLLLQYGDSIIVIDAG 35
>gi|389580750|ref|ZP_10170777.1| hypothetical protein DespoDRAFT_02784 [Desulfobacter postgatei
2ac9]
gi|389402385|gb|EIM64607.1| hypothetical protein DespoDRAFT_02784 [Desulfobacter postgatei
2ac9]
Length = 550
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG+N M+V D +IDAG
Sbjct: 2 LKLIPLGGLGEIGLNMMVVEYNDVIFIIDAG 32
>gi|376006283|ref|ZP_09783575.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|375325344|emb|CCE19328.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
Length = 632
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 23 DSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
D++ + EQ E N P L+++P+GGL EIG N + D I++DAG
Sbjct: 25 DNLPKNREQTPE-DNYPKLKIIPLGGLHEIGKNTCVFEYEDEIIILDAG 72
>gi|383763721|ref|YP_005442703.1| hypothetical protein CLDAP_27660 [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381383989|dbj|BAM00806.1| hypothetical protein CLDAP_27660 [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 550
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGFQYTNICIFIYNGEFNIQQIDE 98
+RV+P+GGLGEIG N M++ + ++IDAG + I I I + + ++++D+
Sbjct: 1 MRVIPLGGLGEIGKNMMVLESEGNLLVIDAGLMFPTSEMHGIDIVIPDATYVMERMDK 58
>gi|390558850|ref|ZP_10243245.1| Ribonuclease J 1 [Nitrolancetus hollandicus Lb]
gi|390174591|emb|CCF82535.1| Ribonuclease J 1 [Nitrolancetus hollandicus Lb]
Length = 554
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P +RV+P+GG+GE+G NC L+ +LID G
Sbjct: 4 PRIRVIPLGGVGEVGKNCTLIEYRGDIVLIDLG 36
>gi|342214080|ref|ZP_08706788.1| hypothetical protein HMPREF9200_0908 [Veillonella sp. oral taxon
780 str. F0422]
gi|341595765|gb|EGS38404.1| hypothetical protein HMPREF9200_0908 [Veillonella sp. oral taxon
780 str. F0422]
Length = 639
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 8 RRRTGRTEGPRKSME-DSVQRKMEQFYEG-SNGPPLRVLPIGGLGEIGMNCMLVGNYDRY 65
RR++ R GPRK ++ K EQ + L+++P+GGLGEIG N + D
Sbjct: 59 RRQSNR--GPRKPQRANTTVEKHEQINRSHARKDKLQIIPLGGLGEIGKNMTIFQYGDDI 116
Query: 66 ILIDAG 71
+++DAG
Sbjct: 117 VVLDAG 122
>gi|428777913|ref|YP_007169700.1| RNA-metabolising metallo-beta-lactamase [Halothece sp. PCC 7418]
gi|428692192|gb|AFZ45486.1| RNA-metabolising metallo-beta-lactamase [Halothece sp. PCC 7418]
Length = 618
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LR++P+GGL EIG N ++ D IL+DAG
Sbjct: 8 PNLRIIPLGGLHEIGKNTCIIEYGDEMILLDAG 40
>gi|315649555|ref|ZP_07902640.1| beta-lactamase domain protein [Paenibacillus vortex V453]
gi|315275028|gb|EFU38403.1| beta-lactamase domain protein [Paenibacillus vortex V453]
Length = 572
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 21 MEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ D +Q + PP+R+ +GGLGEIG N V + ILIDAG
Sbjct: 6 LTDQIQTAKPAKKPRPSAPPVRIFALGGLGEIGKNMYGVEFKNEIILIDAG 56
>gi|123967075|ref|YP_001012156.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus
marinus str. MIT 9515]
gi|123201441|gb|ABM73049.1| Predicted hydrolase of the metallo-beta-lactamase superfamily
[Prochlorococcus marinus str. MIT 9515]
Length = 667
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG--DPGFGFQYTNICI 84
SN P L+++P+GGL EIG N + D ILID G P G N+ +
Sbjct: 20 SNEPALKIIPLGGLHEIGKNTCVFEYEDDIILIDGGLAFPSDGMHGVNVVM 70
>gi|357633496|ref|ZP_09131374.1| beta-lactamase domain protein [Desulfovibrio sp. FW1012B]
gi|357582050|gb|EHJ47383.1| beta-lactamase domain protein [Desulfovibrio sp. FW1012B]
Length = 551
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 45 PIGGLGEIGMNCMLVGNYDRYILIDAG 71
P+GGLGEIG+NCM + + D I++D G
Sbjct: 11 PLGGLGEIGLNCMALVSGDSMIVVDCG 37
>gi|305681497|ref|ZP_07404304.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305659702|gb|EFM49202.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length = 685
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 26/122 (21%)
Query: 4 SKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSN---------GPP---LRVLPIGGLGE 51
SK P++ TGR GP ++ +R + + +G++ PP LR+ +GG+ E
Sbjct: 73 SKTPKKTTGRGSGP-VGRDNRNRRNVVKSMQGADLTGRLPLPKNPPKNGLRIYALGGISE 131
Query: 52 IGMNCMLVGNYDRYILIDAGDPGFGFQYTNICIFIYNGEFNIQQI--DESPLDGKVFDRE 109
IG N + +R +++D G +F +GE + I D P++ K+ + +
Sbjct: 132 IGRNMTVFEYNNRLLIVDCG-----------VLFPSSGEPGVDLILPDFGPIEDKIGNVD 180
Query: 110 AL 111
AL
Sbjct: 181 AL 182
>gi|407785287|ref|ZP_11132435.1| ribonuclease [Celeribacter baekdonensis B30]
gi|407203319|gb|EKE73306.1| ribonuclease [Celeribacter baekdonensis B30]
Length = 554
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Query: 41 LRVLPIGGLGEIGMNCMLVG----NYDRYILIDAG 71
L LP+GG GEIGMNC + G +RYI++D G
Sbjct: 5 LLYLPLGGAGEIGMNCYVYGYGPAGSERYIVVDLG 39
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 86 IYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVI 123
I+ G+F ++DE+P+ G+ FDR EE+SK+GV ++
Sbjct: 161 IHTGDF---KLDETPVVGEAFDRALWEEVSKDGVKAMV 195
>gi|386393641|ref|ZP_10078422.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Desulfovibrio sp. U5L]
gi|385734519|gb|EIG54717.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Desulfovibrio sp. U5L]
Length = 551
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 45 PIGGLGEIGMNCMLVGNYDRYILIDAG 71
P+GGLGEIG+NCM + + D I++D G
Sbjct: 11 PLGGLGEIGLNCMAMVSGDSMIVVDCG 37
>gi|224368802|ref|YP_002602963.1| hydrolase [Desulfobacterium autotrophicum HRM2]
gi|223691518|gb|ACN14801.1| hydrolase (metallo-beta-lactamase superfamily) [Desulfobacterium
autotrophicum HRM2]
Length = 549
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG+N M+ D ++IDAG
Sbjct: 2 LKIIPLGGLGEIGLNMMVFEYGDTIVVIDAG 32
>gi|442318508|ref|YP_007358529.1| metallo-beta-lactamase family protein [Myxococcus stipitatus DSM
14675]
gi|441486150|gb|AGC42845.1| metallo-beta-lactamase family protein [Myxococcus stipitatus DSM
14675]
Length = 548
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+V+P+GGLGEIG+N +++ +LIDAG
Sbjct: 2 LQVIPLGGLGEIGLNSLVIACNGEMLLIDAG 32
>gi|428773294|ref|YP_007165082.1| RNA-metabolising metallo-beta-lactamase [Cyanobacterium stanieri
PCC 7202]
gi|428687573|gb|AFZ47433.1| RNA-metabolising metallo-beta-lactamase [Cyanobacterium stanieri
PCC 7202]
Length = 634
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 8 RRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPP-----LRVLPIGGLGEIGMNCMLVGNY 62
R+ + +T P +++D+ + K + + S LRV+P+GGL EIG N +
Sbjct: 12 RKTSNKTTKPSNNLKDTPKIKPKTIDKNSQETRDDRNLLRVIPLGGLHEIGKNTCIYEYG 71
Query: 63 DRYILIDAGD--PGFGFQYTNICI 84
D I++DAG P G N+ +
Sbjct: 72 DEIIVVDAGIGFPTDGMHGINVVL 95
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 79 YTNICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVI---KNGEMLGVS 132
+T + + I+ G++ +ID +P+DG+ FD L EL ++GV V+ N E+ G +
Sbjct: 196 HTPVGVLIHTGDY---KIDHTPVDGEYFDLHRLAELGEQGVLCVLGDSTNSEVPGFT 249
>gi|310829298|ref|YP_003961655.1| beta-lactamase [Eubacterium limosum KIST612]
gi|308741032|gb|ADO38692.1| beta-lactamase domain protein [Eubacterium limosum KIST612]
Length = 581
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Query: 37 NGPP-----LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N PP L+V+PIGGLGEIG N + D I++D G
Sbjct: 25 NHPPKHKDKLKVIPIGGLGEIGKNMTVFEYKDEMIIVDCG 64
>gi|209966404|ref|YP_002299319.1| metallo-beta-lactamase superfamily [Rhodospirillum centenum SW]
gi|209959870|gb|ACJ00507.1| metallo-beta-lactamase superfamily [Rhodospirillum centenum SW]
Length = 495
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 1 ARESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVG 60
A P+R+ R P ++ E R + G++ + LP+GG IGMN L G
Sbjct: 10 APRGTAPKRQ--RRSAPARTPETGAGRTIPGPVPGAD--EILFLPLGGCSRIGMNMTLYG 65
Query: 61 NYDRYILIDAG 71
+ +++++DAG
Sbjct: 66 HAGKWLIVDAG 76
>gi|119503446|ref|ZP_01625529.1| metallo-beta-lactamase family protein [marine gamma
proteobacterium HTCC2080]
gi|119460508|gb|EAW41600.1| metallo-beta-lactamase family protein [marine gamma
proteobacterium HTCC2080]
Length = 454
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 44 LPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LP+GG GEIGMN L G+ R++L+D G
Sbjct: 11 LPLGGTGEIGMNLNLYGHNGRWLLVDCG 38
>gi|435853472|ref|YP_007314791.1| hypothetical protein Halha_0725 [Halobacteroides halobius DSM
5150]
gi|433669883|gb|AGB40698.1| hypothetical protein Halha_0725 [Halobacteroides halobius DSM
5150]
Length = 554
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N + ++P+GG+GEIG N MLV D +++DAG
Sbjct: 5 NNDSVSIIPLGGIGEIGKNMMLVEMNDEILVVDAG 39
>gi|345893677|ref|ZP_08844470.1| hypothetical protein HMPREF1022_03130 [Desulfovibrio sp.
6_1_46AFAA]
gi|345045931|gb|EGW49829.1| hypothetical protein HMPREF1022_03130 [Desulfovibrio sp.
6_1_46AFAA]
Length = 552
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N P L + P+GGLGEIG+NC L +++D G
Sbjct: 2 NEPYLSITPLGGLGEIGLNCQLWETEGGVVMVDCG 36
>gi|303328310|ref|ZP_07358748.1| metallo-beta-lactamase family protein [Desulfovibrio sp.
3_1_syn3]
gi|302861640|gb|EFL84576.1| metallo-beta-lactamase family protein [Desulfovibrio sp.
3_1_syn3]
Length = 552
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N P L + P+GGLGEIG+NC L +++D G
Sbjct: 2 NEPYLSITPLGGLGEIGLNCQLWETEGGVVMVDCG 36
>gi|206901025|ref|YP_002250872.1| metallo-beta-lactamase family protein [Dictyoglomus thermophilum
H-6-12]
gi|206740128|gb|ACI19186.1| metallo-beta-lactamase family protein [Dictyoglomus thermophilum
H-6-12]
Length = 548
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++PIGG GEIG N +L+ D I+IDAG
Sbjct: 5 LKIIPIGGFGEIGKNMLLLQYGDTIIVIDAG 35
>gi|33241261|ref|NP_876203.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|33238791|gb|AAQ00856.1| Metallo-beta-lactamase superfamily hydrolase [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 647
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
S P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 11 SKEPSLRVIPLGGLHEIGKNTCVFEYGDELMLVDAG 46
>gi|410658689|ref|YP_006911060.1| Zn-dependent hydrolase, RNA-metabolising [Dehalobacter sp. DCA]
gi|410661678|ref|YP_006914049.1| Zn-dependent hydrolase, RNA-metabolising [Dehalobacter sp. CF]
gi|409021044|gb|AFV03075.1| Zn-dependent hydrolase, RNA-metabolising [Dehalobacter sp. DCA]
gi|409024034|gb|AFV06064.1| Zn-dependent hydrolase, RNA-metabolising [Dehalobacter sp. CF]
Length = 554
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG N LV ++ I+IDAG
Sbjct: 7 LQIIPLGGLGEIGKNMTLVKYDNQMIMIDAG 37
>gi|444916671|ref|ZP_21236784.1| Ribonuclease J2 (endoribonuclease in RNA processing) [Cystobacter
fuscus DSM 2262]
gi|444711956|gb|ELW52889.1| Ribonuclease J2 (endoribonuclease in RNA processing) [Cystobacter
fuscus DSM 2262]
Length = 547
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L V+P+GGLGEIG+N M++ +LID G
Sbjct: 2 LHVIPLGGLGEIGLNAMVIACRGEMLLIDCG 32
>gi|171742292|ref|ZP_02918099.1| hypothetical protein BIFDEN_01398 [Bifidobacterium dentium ATCC
27678]
gi|171277906|gb|EDT45567.1| hypothetical protein BIFDEN_01398 [Bifidobacterium dentium ATCC
27678]
Length = 646
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 22/92 (23%)
Query: 2 RESKVPRRRTGRTE----------------GPRKSMEDSVQRKMEQFYEGSNGPP----- 40
+ES R+ +GRT G R+S + Q Q PP
Sbjct: 28 KESATTRKSSGRTRNANGAGRGKGTGTRSAGNRRSTRPAPQATAPQQDSVLIAPPKYRKG 87
Query: 41 -LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R++P+GGLGEIG N +V +LID G
Sbjct: 88 SMRIVPLGGLGEIGRNMNVVEYNGHLLLIDCG 119
>gi|306822237|ref|ZP_07455619.1| metallo-beta-lactamase [Bifidobacterium dentium ATCC 27679]
gi|309802284|ref|ZP_07696392.1| conserved hypothetical protein [Bifidobacterium dentium JCVIHMP022]
gi|304554619|gb|EFM42524.1| metallo-beta-lactamase [Bifidobacterium dentium ATCC 27679]
gi|308221167|gb|EFO77471.1| conserved hypothetical protein [Bifidobacterium dentium JCVIHMP022]
Length = 646
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 22/92 (23%)
Query: 2 RESKVPRRRTGRTE----------------GPRKSMEDSVQRKMEQFYEGSNGPP----- 40
+ES R+ +GRT G R+S + Q Q PP
Sbjct: 28 KESATTRKSSGRTRNANGAGRGKGTGTRSAGNRRSTRPAPQATAPQQDSVLIAPPKYRKG 87
Query: 41 -LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R++P+GGLGEIG N +V +LID G
Sbjct: 88 SMRIVPLGGLGEIGRNMNVVEYNGHLLLIDCG 119
>gi|254797166|ref|YP_003082006.1| metallo-beta-lactamase family, beta-casp subfamily [Neorickettsia
risticii str. Illinois]
gi|254590406|gb|ACT69768.1| metallo-beta-lactamase family, beta-casp subfamily [Neorickettsia
risticii str. Illinois]
Length = 542
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G ++I+ID G
Sbjct: 6 LIFLPLGGTGEIGMNVTLYGYKGQWIMIDCG 36
>gi|384170959|ref|YP_005552336.1| hypothetical protein [Arcobacter sp. L]
gi|345470569|dbj|BAK72019.1| conserved hypothetical protein [Arcobacter sp. L]
Length = 643
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LRV P+GGLGEIG N M++ + I++D G
Sbjct: 94 LRVTPLGGLGEIGGNMMVIETENEAIIVDVG 124
>gi|116074354|ref|ZP_01471616.1| hypothetical protein RS9916_37927 [Synechococcus sp. RS9916]
gi|116069659|gb|EAU75411.1| hypothetical protein RS9916_37927 [Synechococcus sp. RS9916]
Length = 690
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 35 GSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+N P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 16 AANEPCLRVIPLGGLHEIGKNTCVFEYGDDLMLVDAG 52
>gi|334143885|ref|YP_004537041.1| RNA-metabolising metallo-beta-lactamase [Thioalkalimicrobium
cyclicum ALM1]
gi|333964796|gb|AEG31562.1| RNA-metabolising metallo-beta-lactamase [Thioalkalimicrobium
cyclicum ALM1]
Length = 456
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 44 LPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGFQ 78
LP+GG+GEIG N ML G+ Y+++D G GF+
Sbjct: 21 LPLGGVGEIGQNMMLYGHDGHYLMVDC---GLGFE 52
>gi|317153877|ref|YP_004121925.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio
aespoeensis Aspo-2]
gi|316944128|gb|ADU63179.1| RNA-metabolising metallo-beta-lactamase [Desulfovibrio
aespoeensis Aspo-2]
Length = 552
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG-----DPGFGFQYTNIC 83
++ L P+GGLGEIGMNCM +L+D G D FG C
Sbjct: 2 ADTTSLTFYPLGGLGEIGMNCMAFKTERSMVLVDCGLMFPEDYHFGVDVVIPC 54
>gi|297623851|ref|YP_003705285.1| RNA-metabolising metallo-beta-lactamase [Truepera radiovictrix
DSM 17093]
gi|297165031|gb|ADI14742.1| RNA-metabolising metallo-beta-lactamase [Truepera radiovictrix
DSM 17093]
Length = 574
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 13 RTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
RT + S R ++ S LR++P+GG+GEIG N V D +LID G
Sbjct: 3 RTRKHPAGAKGSAGRSTDKEAAQSAPKALRIIPLGGMGEIGKNMFAVEYEDEILLIDGG 61
>gi|336401183|ref|ZP_08581955.1| hypothetical protein HMPREF0404_01246 [Fusobacterium sp. 21_1A]
gi|336418585|ref|ZP_08598859.1| metallo-beta-lactamase family protein [Fusobacterium sp. 11_3_2]
gi|423136949|ref|ZP_17124592.1| hypothetical protein HMPREF9942_00730 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|336161540|gb|EGN64541.1| hypothetical protein HMPREF0404_01246 [Fusobacterium sp. 21_1A]
gi|336164522|gb|EGN67427.1| metallo-beta-lactamase family protein [Fusobacterium sp. 11_3_2]
gi|371961016|gb|EHO78659.1| hypothetical protein HMPREF9942_00730 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 631
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 80 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 110
>gi|126665320|ref|ZP_01736302.1| metallo-beta-lactamase family protein [Marinobacter sp. ELB17]
gi|126629948|gb|EBA00564.1| metallo-beta-lactamase family protein [Marinobacter sp. ELB17]
Length = 460
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ R++++D G
Sbjct: 8 LWFLPLGGTGEIGMNLNLYGHDGRWLMVDCG 38
>gi|399543321|ref|YP_006556629.1| metallo-beta-lactamase family protein [Marinobacter sp. BSs20148]
gi|399158653|gb|AFP29216.1| metallo-beta-lactamase family protein [Marinobacter sp. BSs20148]
Length = 460
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ R++++D G
Sbjct: 8 LWFLPLGGTGEIGMNLNLYGHDGRWLMVDCG 38
>gi|417002314|ref|ZP_11941703.1| hypothetical protein HMPREF9290_1338 [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479455|gb|EGC82551.1| hypothetical protein HMPREF9290_1338 [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 560
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N LR++P+GGL E+G NC +V + I+ID G
Sbjct: 3 NDKKLRIIPLGGLQEVGKNCTVVEYGNDMIMIDCG 37
>gi|421145279|ref|ZP_15605164.1| metal dependent hydrolase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|395488316|gb|EJG09186.1| metal dependent hydrolase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 635
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 84 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 114
>gi|345888493|ref|ZP_08839576.1| hypothetical protein HMPREF0178_02350 [Bilophila sp. 4_1_30]
gi|345040662|gb|EGW44899.1| hypothetical protein HMPREF0178_02350 [Bilophila sp. 4_1_30]
Length = 551
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L + P+GGLGEIGMNC + + +L+D G
Sbjct: 6 LTITPLGGLGEIGMNCQMWNTPEGCVLVDCG 36
>gi|354584588|ref|ZP_09003482.1| RNA-metabolising metallo-beta-lactamase [Paenibacillus lactis
154]
gi|353194109|gb|EHB59612.1| RNA-metabolising metallo-beta-lactamase [Paenibacillus lactis
154]
Length = 572
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 21 MEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ D +Q PP+R+ +GGLGEIG N V + ILIDAG
Sbjct: 6 LNDQIQNAKPAKKPRPTAPPVRLFALGGLGEIGKNMYGVEFKNEIILIDAG 56
>gi|37520588|ref|NP_923965.1| hypothetical protein glr1019 [Gloeobacter violaceus PCC 7421]
gi|35211582|dbj|BAC88960.1| glr1019 [Gloeobacter violaceus PCC 7421]
Length = 587
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 40 PLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PLR+ P+GGLGEIG N + D +L+D G
Sbjct: 11 PLRITPLGGLGEIGKNTWIFQVNDEIMLLDGG 42
>gi|428768436|ref|YP_007160226.1| Ribocuclease J [Cyanobacterium aponinum PCC 10605]
gi|428682715|gb|AFZ52182.1| Ribocuclease J [Cyanobacterium aponinum PCC 10605]
Length = 644
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 35 GSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+N P ++++P+GGL EIG N + D IL+DAG
Sbjct: 46 SNNQPHVKIVPLGGLHEIGKNTCIYEYEDEMILVDAG 82
>gi|317484613|ref|ZP_07943517.1| metallo-beta-lactamase superfamily protein [Bilophila wadsworthia
3_1_6]
gi|316924153|gb|EFV45335.1| metallo-beta-lactamase superfamily protein [Bilophila wadsworthia
3_1_6]
Length = 551
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L + P+GGLGEIGMNC + + +L+D G
Sbjct: 6 LTITPLGGLGEIGMNCQMWNTPEGCVLVDCG 36
>gi|254492430|ref|ZP_05105602.1| RNA-metabolising metallo-beta-lactamase family [Methylophaga
thiooxidans DMS010]
gi|224462322|gb|EEF78599.1| RNA-metabolising metallo-beta-lactamase family [Methylophaga
thiooxydans DMS010]
Length = 458
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 44 LPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LP+GG GEIGMN L G+ R++++D G
Sbjct: 11 LPLGGTGEIGMNLNLYGHNGRWLMVDCG 38
>gi|327398207|ref|YP_004339076.1| Ribocuclease J [Hippea maritima DSM 10411]
gi|327180836|gb|AEA33017.1| Ribocuclease J [Hippea maritima DSM 10411]
Length = 551
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 74 GFGFQYT-NICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKNG 126
G GF T ++ + I+ G+F +ID++P+DGK FD E +GV L++ +
Sbjct: 142 GVGFAITTDVGVIIHTGDF---KIDQTPVDGKPFDMLKFSEYGSKGVKLLLSDS 192
>gi|443673354|ref|ZP_21138422.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
gi|443414169|emb|CCQ16760.1| putative uncharacterized protein [Rhodococcus sp. AW25M09]
Length = 621
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 1 ARESKVPRRRTGRTEGPRKSME-DSVQRKMEQFYEGSNGPP------LRVLPIGGLGEIG 53
AR+ K + + RT+ P K E D QR PP LRV+ +GG+GEIG
Sbjct: 32 ARQGKPMVQNSARTQRPDKRREFDPTQRL--------GTPPKAPFKGLRVVALGGIGEIG 83
Query: 54 MNCMLVGNYDRYILIDAG 71
N + + R ++ID G
Sbjct: 84 RNMTVFEHQGRLLIIDCG 101
>gi|401679272|ref|ZP_10811205.1| hypothetical protein HMPREF1151_0513 [Veillonella sp. ACP1]
gi|400219854|gb|EJO50716.1| hypothetical protein HMPREF1151_0513 [Veillonella sp. ACP1]
Length = 724
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 35 GSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
GSN +++P+GGLGEIG N + D I++DAG
Sbjct: 171 GSNKGKFQIIPLGGLGEIGKNMTIFQYEDEIIVLDAG 207
>gi|326430409|gb|EGD75979.1| metallo-beta-lactamase superfamily [Salpingoeca sp. ATCC 50818]
Length = 613
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 27 RKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+++EQ ++ N ++P+GG EIGMNC L + +R++++D G
Sbjct: 53 KQLEQLFK-DNDKDHFLIPMGGAEEIGMNCNLYVHKNRFLMVDLG 96
>gi|260893524|ref|YP_003239621.1| beta-lactamase [Ammonifex degensii KC4]
gi|260865665|gb|ACX52771.1| beta-lactamase domain protein [Ammonifex degensii KC4]
Length = 553
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG NCM V + ++ID G
Sbjct: 6 LQIIPLGGLGEIGKNCMAVRCGNDIVVIDCG 36
>gi|303229778|ref|ZP_07316558.1| conserved hypothetical protein [Veillonella atypica
ACS-134-V-Col7a]
gi|302515538|gb|EFL57500.1| conserved hypothetical protein [Veillonella atypica
ACS-134-V-Col7a]
Length = 724
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 35 GSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
GSN +++P+GGLGEIG N + D I++DAG
Sbjct: 171 GSNKGKFQIIPLGGLGEIGKNMTIFQYEDEIIVLDAG 207
>gi|289765864|ref|ZP_06525242.1| Zn-dependent hydrolase [Fusobacterium sp. D11]
gi|289717419|gb|EFD81431.1| Zn-dependent hydrolase [Fusobacterium sp. D11]
Length = 552
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 1 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 31
>gi|429727922|ref|ZP_19262670.1| ribonuclease J 1 [Peptostreptococcus anaerobius VPI 4330]
gi|429151017|gb|EKX93905.1| ribonuclease J 1 [Peptostreptococcus anaerobius VPI 4330]
Length = 556
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+N ++++P+GGL EIG N L+ D I+IDAG
Sbjct: 4 NNNDKIKIIPLGGLNEIGKNMTLIEYKDEIIVIDAG 39
>gi|187934604|ref|YP_001885784.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum
B str. Eklund 17B]
gi|187722757|gb|ACD23978.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum
B str. Eklund 17B]
Length = 572
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 21 MEDSVQRKMEQF----YEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
ME+ ++ ++ + N P L+++P+GGLGEIG N D I+ID G
Sbjct: 1 MENITEKNLKSYKPKKVSLKNKPKLKIIPLGGLGEIGKNITAFEYGDEIIVIDCG 55
>gi|329923198|ref|ZP_08278684.1| ribonuclease J 1 [Paenibacillus sp. HGF5]
gi|328941524|gb|EGG37814.1| ribonuclease J 1 [Paenibacillus sp. HGF5]
Length = 572
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 21 MEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ D +Q + PP+R+ +GGLGEIG N V + I+IDAG
Sbjct: 6 LTDKIQTAKPAKKPRPSAPPVRIFALGGLGEIGKNMYGVEFKNEIIIIDAG 56
>gi|261409393|ref|YP_003245634.1| beta-lactamase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261285856|gb|ACX67827.1| beta-lactamase domain protein [Paenibacillus sp. Y412MC10]
Length = 572
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 21 MEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ D +Q + PP+R+ +GGLGEIG N V + I+IDAG
Sbjct: 6 LTDKIQTAKPAKKPRPSAPPVRIFALGGLGEIGKNMYGVEFKNEIIIIDAG 56
>gi|303231742|ref|ZP_07318465.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513691|gb|EFL55710.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
Length = 724
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 35 GSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
GSN +++P+GGLGEIG N + D I++DAG
Sbjct: 171 GSNKGKFQIIPLGGLGEIGKNMTIFQYEDEIIVLDAG 207
>gi|34763180|ref|ZP_00144146.1| Zn-dependent hydrolase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27887149|gb|EAA24254.1| Zn-dependent hydrolase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 552
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 1 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 31
>gi|218782205|ref|YP_002433523.1| beta-lactamase domain-containing protein [Desulfatibacillum
alkenivorans AK-01]
gi|218763589|gb|ACL06055.1| beta-lactamase domain protein [Desulfatibacillum alkenivorans
AK-01]
Length = 560
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 2/33 (6%)
Query: 40 PLRVLPIGGLGEIGMNCMLVGNYDRYIL-IDAG 71
PL+++P+GGLGEIG+N M V YD IL +D+G
Sbjct: 12 PLKIIPLGGLGEIGLN-MTVFEYDGVILVVDSG 43
>gi|294785214|ref|ZP_06750502.1| metallo-beta-lactamase family protein [Fusobacterium sp. 3_1_27]
gi|294486928|gb|EFG34290.1| metallo-beta-lactamase family protein [Fusobacterium sp. 3_1_27]
Length = 610
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 59 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 89
>gi|256845480|ref|ZP_05550938.1| metal-dependent hydrolase [Fusobacterium sp. 3_1_36A2]
gi|256719039|gb|EEU32594.1| metal-dependent hydrolase [Fusobacterium sp. 3_1_36A2]
Length = 610
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 59 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 89
>gi|237742207|ref|ZP_04572688.1| Zn-dependent hydrolase [Fusobacterium sp. 4_1_13]
gi|229429855|gb|EEO40067.1| Zn-dependent hydrolase [Fusobacterium sp. 4_1_13]
Length = 610
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 59 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 89
>gi|428780528|ref|YP_007172314.1| hypothetical protein Dacsa_2346 [Dactylococcopsis salina PCC
8305]
gi|428694807|gb|AFZ50957.1| hypothetical protein Dacsa_2346 [Dactylococcopsis salina PCC
8305]
Length = 638
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 17 PRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGD--PG 74
P K+ + +K + + LR++P+GGL EIG N ++ + IL+DAG P
Sbjct: 4 PIKNQNKPIIKKKQPMSNNESQSNLRIIPLGGLHEIGKNTCIIEYEEEMILLDAGIGFPD 63
Query: 75 FGFQYTNICI 84
G N+ +
Sbjct: 64 EGMHGINVVL 73
>gi|87301617|ref|ZP_01084457.1| hypothetical protein WH5701_03044 [Synechococcus sp. WH 5701]
gi|87283834|gb|EAQ75788.1| hypothetical protein WH5701_03044 [Synechococcus sp. WH 5701]
Length = 673
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 15 PALRVIPLGGLHEIGKNTCVFEYGDELMLVDAG 47
>gi|183602113|ref|ZP_02963481.1| hypothetical protein BIFLAC_07662 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219683025|ref|YP_002469408.1| beta-lactamase-like protein [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191345|ref|YP_002968739.1| hypothetical protein Balac_1328 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196751|ref|YP_002970306.1| hypothetical protein Balat_1328 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|384194343|ref|YP_005580089.1| metallo-beta-lactamase family protein [Bifidobacterium animalis
subsp. lactis BLC1]
gi|384195907|ref|YP_005581652.1| hypothetical protein BalV_1285 [Bifidobacterium animalis subsp.
lactis V9]
gi|423679877|ref|ZP_17654753.1| hypothetical protein FEM_14903 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183218606|gb|EDT89249.1| hypothetical protein BIFLAC_07662 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219620675|gb|ACL28832.1| beta-lactamase-like protein [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249737|gb|ACS46677.1| hypothetical protein Balac_1328 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251305|gb|ACS48244.1| hypothetical protein Balat_1328 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295794338|gb|ADG33873.1| hypothetical protein BalV_1285 [Bifidobacterium animalis subsp.
lactis V9]
gi|345283202|gb|AEN77056.1| metallo-beta-lactamase family protein [Bifidobacterium animalis
subsp. lactis BLC1]
gi|366040876|gb|EHN17389.1| hypothetical protein FEM_14903 [Bifidobacterium animalis subsp.
lactis BS 01]
Length = 635
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 1 ARESKVPR-RRTGRTEGPRKSMEDSVQRKM---EQFYEGSNGPP------LRVLPIGGLG 50
A ++K PR R++ R R + +V + + + E PP +R++P+GGLG
Sbjct: 30 ASQAKSPRTRKSTRNTSTRVRKQINVNKPLATSDTQDENRVAPPKYRKGSMRIVPLGGLG 89
Query: 51 EIGMNCMLVGNYDRYILIDAG 71
EIG N ++ +LID G
Sbjct: 90 EIGRNMNVIEYNGHILLIDCG 110
>gi|148241169|ref|YP_001226326.1| metallo-beta-lactamase superfamily hydrolase [Synechococcus sp.
RCC307]
gi|147849479|emb|CAK26973.1| Predicted hydrolase of the metallo-beta-lactamase superfamily
[Synechococcus sp. RCC307]
Length = 619
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +LIDAG
Sbjct: 11 PTLRVIPLGGLHEIGKNTCVFEFGDDLVLIDAG 43
>gi|242309136|ref|ZP_04808291.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524177|gb|EEQ64043.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 658
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R+ PIGGLGEIG N ++ + I+IDAG
Sbjct: 110 VRITPIGGLGEIGGNMTVIETQNSAIIIDAG 140
>gi|384189979|ref|YP_005575727.1| Metal-dependent hydrolase [Bifidobacterium animalis subsp. lactis
BB-12]
gi|384192769|ref|YP_005578516.1| Hydrolase acting on ester bonds [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
gi|289177471|gb|ADC84717.1| Metal-dependent hydrolase [Bifidobacterium animalis subsp. lactis
BB-12]
gi|340365506|gb|AEK30797.1| Hydrolase acting on ester bonds [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
Length = 641
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 1 ARESKVPR-RRTGRTEGPRKSMEDSVQRKM---EQFYEGSNGPP------LRVLPIGGLG 50
A ++K PR R++ R R + +V + + + E PP +R++P+GGLG
Sbjct: 36 ASQAKSPRTRKSTRNTSTRVRKQINVNKPLATSDTQDENRVAPPKYRKGSMRIVPLGGLG 95
Query: 51 EIGMNCMLVGNYDRYILIDAG 71
EIG N ++ +LID G
Sbjct: 96 EIGRNMNVIEYNGHILLIDCG 116
>gi|386867472|ref|YP_006280466.1| hypothetical protein BANAN_06475 [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385701555|gb|AFI63503.1| hypothetical protein BANAN_06475 [Bifidobacterium animalis subsp.
animalis ATCC 25527]
Length = 615
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 1 ARESKVPR-RRTGRTEGPRKSMEDSVQRKM---EQFYEGSNGPP------LRVLPIGGLG 50
A ++K PR R++ R R + +V + + + E PP +R++P+GGLG
Sbjct: 10 ASQAKSPRTRKSTRNTSTRVRKQINVNKPLATSDTQDENRVAPPKYRKGSMRIVPLGGLG 69
Query: 51 EIGMNCMLVGNYDRYILIDAG 71
EIG N ++ +LID G
Sbjct: 70 EIGRNMNVIEYNGHILLIDCG 90
>gi|389691133|ref|ZP_10180026.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Microvirga sp. WSM3557]
gi|388589376|gb|EIM29665.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Microvirga sp. WSM3557]
Length = 557
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 35 GSNGPPLRVLPIGGLGEIGMNCMLVG----NYDRYILIDAGDPGFG 76
SN L LP+GGLGEIGMN L G ++IL+D G GFG
Sbjct: 2 ASNQDELVFLPLGGLGEIGMNAALYGFGPEAERQWILVDCG-MGFG 46
>gi|72383088|ref|YP_292443.1| hypothetical protein PMN2A_1250 [Prochlorococcus marinus str.
NATL2A]
gi|72002938|gb|AAZ58740.1| Conserved hypothetical protein MG423 [Prochlorococcus marinus
str. NATL2A]
Length = 644
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ P LR++P+GGLGEIG N + D +++DAG
Sbjct: 11 TKSPCLRIIPLGGLGEIGKNTCVFEYGDDIMILDAG 46
>gi|84497074|ref|ZP_00995896.1| hypothetical protein JNB_12808 [Janibacter sp. HTCC2649]
gi|84381962|gb|EAP97844.1| hypothetical protein JNB_12808 [Janibacter sp. HTCC2649]
Length = 565
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 39 PP--LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PP LRV+P+GGLGEIG N + + R +++D G
Sbjct: 18 PPNGLRVVPLGGLGEIGRNMTVYEHAGRLLIVDCG 52
>gi|251781074|ref|ZP_04823994.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243085389|gb|EES51279.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 554
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N P L+++P+GGLGEIG N D I+ID G
Sbjct: 3 NKPKLKIIPLGGLGEIGKNITAFEYGDEIIVIDCG 37
>gi|452204723|ref|YP_007484852.1| beta-lactamase domain-containing protein [Dehalococcoides
mccartyi BTF08]
gi|452111779|gb|AGG07510.1| beta-lactamase domain-containing protein [Dehalococcoides
mccartyi BTF08]
Length = 551
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L+++P+GGLGEIG N M V + ILID G
Sbjct: 4 PKLKIVPLGGLGEIGKNMMSVEYGEDIILIDCG 36
>gi|296451285|ref|ZP_06893025.1| metallo-beta-lactamase [Clostridium difficile NAP08]
gi|296880363|ref|ZP_06904326.1| metallo-beta-lactamase [Clostridium difficile NAP07]
gi|296259891|gb|EFH06746.1| metallo-beta-lactamase [Clostridium difficile NAP08]
gi|296428604|gb|EFH14488.1| metallo-beta-lactamase [Clostridium difficile NAP07]
Length = 573
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 26 QRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
Q++M Q ++ N ++V+ +GGL E+G N +V D I+IDAG
Sbjct: 12 QKEMMQLFK-KNTNKIKVMALGGLNEVGKNMTVVEYKDEIIVIDAG 56
>gi|289432329|ref|YP_003462202.1| RNA-metabolising metallo-beta-lactamase [Dehalococcoides sp. GT]
gi|288946049|gb|ADC73746.1| RNA-metabolising metallo-beta-lactamase [Dehalococcoides sp. GT]
Length = 551
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L+++P+GGLGEIG N M V + ILID G
Sbjct: 4 PKLKIVPLGGLGEIGKNMMSVEYGEDIILIDCG 36
>gi|270307806|ref|YP_003329864.1| metallo-beta-lactamase [Dehalococcoides sp. VS]
gi|270153698|gb|ACZ61536.1| metallo-beta-lactamase [Dehalococcoides sp. VS]
Length = 551
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L+++P+GGLGEIG N M V + ILID G
Sbjct: 4 PKLKIVPLGGLGEIGKNMMSVEYGEDIILIDCG 36
>gi|57234760|ref|YP_181182.1| metallo-beta-lactamase [Dehalococcoides ethenogenes 195]
gi|57225208|gb|AAW40265.1| metallo-beta-lactamase family protein [Dehalococcoides
ethenogenes 195]
Length = 551
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L+++P+GGLGEIG N M V + ILID G
Sbjct: 4 PKLKIVPLGGLGEIGKNMMSVEYGEDIILIDCG 36
>gi|335042556|ref|ZP_08535583.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Methylophaga aminisulfidivorans MP]
gi|333789170|gb|EGL55052.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Methylophaga aminisulfidivorans MP]
Length = 458
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 44 LPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LP+GG GEIGMN L G+ R++++D G
Sbjct: 11 LPLGGTGEIGMNLNLYGHDGRWLMVDCG 38
>gi|73748280|ref|YP_307519.1| metallo-beta-lactamase [Dehalococcoides sp. CBDB1]
gi|147669060|ref|YP_001213878.1| beta-lactamase domain-containing protein [Dehalococcoides sp.
BAV1]
gi|452203287|ref|YP_007483420.1| beta-lactamase domain-containing protein [Dehalococcoides
mccartyi DCMB5]
gi|73659996|emb|CAI82603.1| metallo-beta-lactamase family protein [Dehalococcoides sp. CBDB1]
gi|146270008|gb|ABQ17000.1| beta-lactamase domain protein [Dehalococcoides sp. BAV1]
gi|452110346|gb|AGG06078.1| beta-lactamase domain-containing protein [Dehalococcoides
mccartyi DCMB5]
Length = 551
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L+++P+GGLGEIG N M V + ILID G
Sbjct: 4 PKLKIVPLGGLGEIGKNMMSVEYGEDIILIDCG 36
>gi|260682896|ref|YP_003214181.1| metallo-beta-lactamase [Clostridium difficile CD196]
gi|260686494|ref|YP_003217627.1| metallo-beta-lactamase [Clostridium difficile R20291]
gi|423082322|ref|ZP_17070914.1| ribonuclease J 1 [Clostridium difficile 002-P50-2011]
gi|423087714|ref|ZP_17076100.1| ribonuclease J 1 [Clostridium difficile 050-P50-2011]
gi|423090877|ref|ZP_17079163.1| ribonuclease J 1 [Clostridium difficile 70-100-2010]
gi|260209059|emb|CBA62187.1| metallo beta-lactamase superfamily protein [Clostridium difficile
CD196]
gi|260212510|emb|CBE03446.1| metallo beta-lactamase superfamily protein [Clostridium difficile
R20291]
gi|357544028|gb|EHJ26034.1| ribonuclease J 1 [Clostridium difficile 050-P50-2011]
gi|357548648|gb|EHJ30508.1| ribonuclease J 1 [Clostridium difficile 002-P50-2011]
gi|357555992|gb|EHJ37614.1| ribonuclease J 1 [Clostridium difficile 70-100-2010]
Length = 573
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 26 QRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
Q++M Q ++ N ++V+ +GGL E+G N +V D I+IDAG
Sbjct: 12 QKEMMQLFK-KNTNKIKVMALGGLNEVGKNMTVVEYKDEIIVIDAG 56
>gi|410862017|ref|YP_006977251.1| metallo-beta-lactamase family protein [Alteromonas macleodii
AltDE1]
gi|410819279|gb|AFV85896.1| metallo-beta-lactamase family protein [Alteromonas macleodii
AltDE1]
Length = 461
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L +P+GG GEIGMN L G+ R++++D G
Sbjct: 9 LWFVPLGGTGEIGMNLNLYGHNGRWLMVDCG 39
>gi|253574696|ref|ZP_04852036.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251845742|gb|EES73750.1| beta-lactamase domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 569
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PP+R+ +GG+GEIG N + D ILIDAG
Sbjct: 20 PPVRIFSLGGIGEIGKNMYGIEFRDEIILIDAG 52
>gi|334340485|ref|YP_004545465.1| RNA-metabolising metallo-beta-lactamase [Desulfotomaculum ruminis
DSM 2154]
gi|334091839|gb|AEG60179.1| RNA-metabolising metallo-beta-lactamase [Desulfotomaculum ruminis
DSM 2154]
Length = 554
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L V+P+GGLGEIG N V D +LID G
Sbjct: 5 PKLAVIPLGGLGEIGKNMTAVRFGDHIVLIDCG 37
>gi|117924914|ref|YP_865531.1| beta-lactamase domain-containing protein [Magnetococcus marinus
MC-1]
gi|117608670|gb|ABK44125.1| beta-lactamase domain protein [Magnetococcus marinus MC-1]
Length = 559
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 29 MEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
M EGS +R+LP+GGLGEIGMN M+ + ++ D G
Sbjct: 1 MTSSTEGS----VRILPLGGLGEIGMNLMVYECQGKLLVFDTG 39
>gi|332142126|ref|YP_004427864.1| metallo-beta-lactamase family protein [Alteromonas macleodii str.
'Deep ecotype']
gi|327552148|gb|AEA98866.1| metallo-beta-lactamase family protein [Alteromonas macleodii str.
'Deep ecotype']
Length = 461
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L +P+GG GEIGMN L G+ R++++D G
Sbjct: 9 LWFVPLGGTGEIGMNLNLYGHNGRWLMVDCG 39
>gi|119477737|ref|ZP_01617887.1| metallo-beta-lactamase family protein [marine gamma
proteobacterium HTCC2143]
gi|119449240|gb|EAW30480.1| metallo-beta-lactamase family protein [marine gamma
proteobacterium HTCC2143]
Length = 441
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ +++++D G
Sbjct: 8 LWFLPLGGCGEIGMNLSLYGHNGQWLMVDCG 38
>gi|118578825|ref|YP_900075.1| beta-lactamase domain-containing protein [Pelobacter propionicus
DSM 2379]
gi|118501535|gb|ABK98017.1| beta-lactamase domain protein [Pelobacter propionicus DSM 2379]
Length = 569
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N PLR++P+GGLGEIG+N M +++D G
Sbjct: 18 NTDPLRIIPLGGLGEIGLNMMAYECGGDILIVDCG 52
>gi|429760628|ref|ZP_19293094.1| hypothetical protein HMPREF0870_01545 [Veillonella atypica KON]
gi|429176886|gb|EKY18236.1| hypothetical protein HMPREF0870_01545 [Veillonella atypica KON]
Length = 571
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 35 GSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
GSN +++P+GGLGEIG N + D I++DAG
Sbjct: 18 GSNKGKFQIIPLGGLGEIGKNMTIFQYEDEIIVLDAG 54
>gi|153953954|ref|YP_001394719.1| metal-dependent hydrolase [Clostridium kluyveri DSM 555]
gi|219854568|ref|YP_002471690.1| hypothetical protein CKR_1225 [Clostridium kluyveri NBRC 12016]
gi|146346835|gb|EDK33371.1| Predicted metal-dependent hydrolase [Clostridium kluyveri DSM 555]
gi|219568292|dbj|BAH06276.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 555
Score = 37.0 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 79 YTNICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVI 123
+T+ I ++ G+F ++D +P+DG V D ELSK+GVT+++
Sbjct: 152 HTSAGIILHTGDF---KVDYTPIDGSVIDLARFAELSKKGVTVML 193
>gi|428201402|ref|YP_007079991.1| hypothetical protein Ple7327_1019 [Pleurocapsa sp. PCC 7327]
gi|427978834|gb|AFY76434.1| hypothetical protein Ple7327_1019 [Pleurocapsa sp. PCC 7327]
Length = 595
Score = 37.0 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 34 EGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ N P L+++P+GGL EIG N + D +L+DAG
Sbjct: 3 QNGNQPNLKIIPLGGLHEIGKNTCIFEYDDEILLLDAG 40
>gi|284928624|ref|YP_003421146.1| hypothetical protein UCYN_00320 [cyanobacterium UCYN-A]
gi|284809083|gb|ADB94788.1| conserved hypothetical protein [cyanobacterium UCYN-A]
Length = 617
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 26 QRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ KM Q + S L+++P+GGL EIG N ++ D ILIDAG
Sbjct: 16 KEKMNQITKEST---LKIIPLGGLHEIGKNTCVLEYGDEIILIDAG 58
>gi|19704545|ref|NP_604107.1| metal dependent hydrolase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296328424|ref|ZP_06870950.1| metallo-beta-lactamase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19714831|gb|AAL95406.1| Metal dependent hydrolase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296154498|gb|EFG95290.1| metallo-beta-lactamase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 608
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 57 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 87
>gi|421527051|ref|ZP_15973656.1| metal dependent hydrolase [Fusobacterium nucleatum ChDC F128]
gi|402256780|gb|EJU07257.1| metal dependent hydrolase [Fusobacterium nucleatum ChDC F128]
Length = 620
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 69 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 99
>gi|395225407|ref|ZP_10403931.1| hypothetical protein ThvES_00006460 [Thiovulum sp. ES]
gi|394446429|gb|EJF07256.1| hypothetical protein ThvES_00006460 [Thiovulum sp. ES]
Length = 636
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 26 QRKMEQF--YEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
QR+++ F + + +R+ P+GGLGE+G N ++ + ILID G
Sbjct: 71 QRRLQSFNKLDFNTDAKIRITPLGGLGEVGGNLTVIETENEAILIDVG 118
>gi|237752125|ref|ZP_04582605.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376367|gb|EEO26458.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 669
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R+ PIGGLGEIG N ++ + I+IDAG
Sbjct: 121 VRITPIGGLGEIGGNMTIIETQNSAIIIDAG 151
>gi|253827193|ref|ZP_04870078.1| putative hydrolase [Helicobacter canadensis MIT 98-5491]
gi|313141397|ref|ZP_07803590.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510599|gb|EES89258.1| putative hydrolase [Helicobacter canadensis MIT 98-5491]
gi|313130428|gb|EFR48045.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 659
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R+ PIGGLGEIG N ++ + I+IDAG
Sbjct: 111 VRITPIGGLGEIGGNMTIIETQNSAIIIDAG 141
>gi|218247709|ref|YP_002373080.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC
8801]
gi|257060954|ref|YP_003138842.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC
8802]
gi|218168187|gb|ACK66924.1| beta-lactamase domain protein [Cyanothece sp. PCC 8801]
gi|256591120|gb|ACV02007.1| beta-lactamase domain protein [Cyanothece sp. PCC 8802]
Length = 588
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGD--PGFGFQYTNICI 84
P L+++P+GGL EIG N + D IL+DAG P G NI +
Sbjct: 8 PTLKIIPLGGLHEIGKNTCIFEYGDEIILLDAGIAFPTEGMHGVNIVL 55
>gi|410726430|ref|ZP_11364668.1| hypothetical protein A370_02762 [Clostridium sp. Maddingley
MBC34-26]
gi|410600675|gb|EKQ55201.1| hypothetical protein A370_02762 [Clostridium sp. Maddingley
MBC34-26]
Length = 569
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
S P++++P+GGLGEIG N D I+ID G
Sbjct: 17 SKATPIKIIPLGGLGEIGKNMTAFEYDDEIIVIDCG 52
>gi|338814556|ref|ZP_08626570.1| RNA-metabolising metallo-beta-lactamase [Acetonema longum DSM
6540]
gi|337273492|gb|EGO62115.1| RNA-metabolising metallo-beta-lactamase [Acetonema longum DSM
6540]
Length = 556
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG-------DPGFGFQYTNICIFIYNGEF 91
P ++++P+GGLGEIG N ++ D I+ID G PG +I + N +F
Sbjct: 6 PKIQIIPLGGLGEIGKNMTVIRYGDDIIVIDCGLMFPEDDMPGIDLVIPDITYLLENRDF 65
>gi|119485218|ref|ZP_01619603.1| hypothetical protein L8106_07209 [Lyngbya sp. PCC 8106]
gi|119457446|gb|EAW38571.1| hypothetical protein L8106_07209 [Lyngbya sp. PCC 8106]
Length = 617
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 22 EDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
++SV++ + + S+G L+++P+GGL EIG N + D IL+DAG
Sbjct: 13 KNSVRKPLSK----SDGTGLKIIPLGGLHEIGKNTCVFEYDDEIILLDAG 58
>gi|160880426|ref|YP_001559394.1| beta-lactamase domain-containing protein [Clostridium
phytofermentans ISDg]
gi|160429092|gb|ABX42655.1| beta-lactamase domain protein [Clostridium phytofermentans ISDg]
Length = 618
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P ++++P+GGLG+IGMN D I++D G
Sbjct: 71 PAVKIIPLGGLGQIGMNITAFEYQDSIIVVDCG 103
>gi|434399023|ref|YP_007133027.1| Ribocuclease J [Stanieria cyanosphaera PCC 7437]
gi|428270120|gb|AFZ36061.1| Ribocuclease J [Stanieria cyanosphaera PCC 7437]
Length = 584
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
++ P L+++P+GGL EIG N + D IL+DAG
Sbjct: 4 NDKPTLKIIPLGGLHEIGKNTCVFEYEDEIILLDAG 39
>gi|374292596|ref|YP_005039631.1| putative metallo-beta-lactamase superfamily hydrolase
[Azospirillum lipoferum 4B]
gi|357424535|emb|CBS87414.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Azospirillum lipoferum 4B]
Length = 571
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ +++++D G
Sbjct: 26 LYFLPLGGSGEIGMNLNLYGHRGKWLMVDLG 56
>gi|288958973|ref|YP_003449314.1| metallo-beta-lactamase [Azospirillum sp. B510]
gi|288911281|dbj|BAI72770.1| metallo-beta-lactamase [Azospirillum sp. B510]
Length = 561
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ +++++D G
Sbjct: 16 LYFLPLGGSGEIGMNLNLYGHRGKWLMVDLG 46
>gi|227874505|ref|ZP_03992677.1| metallo-beta lactamase superfamily hydrolase [Oribacterium sinus
F0268]
gi|227839649|gb|EEJ50107.1| metallo-beta lactamase superfamily hydrolase [Oribacterium sinus
F0268]
Length = 662
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 27 RKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
RK + ++GS ++V+P+GGL +IGMN + D I++D G
Sbjct: 103 RKPKHSFQGS----VKVIPLGGLDQIGMNITAIETEDTMIIVDCG 143
>gi|186681331|ref|YP_001864527.1| beta-lactamase domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186463783|gb|ACC79584.1| beta-lactamase domain protein [Nostoc punctiforme PCC 73102]
Length = 590
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+N L+++P+GGL EIG N L D IL+DAG
Sbjct: 6 ANNSALKIIPLGGLHEIGKNTCLFEYDDEIILLDAG 41
>gi|422338241|ref|ZP_16419201.1| metallo-beta-lactamase family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355372879|gb|EHG20218.1| metallo-beta-lactamase family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 631
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 80 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 110
>gi|422934367|ref|ZP_16966569.1| metallo-beta-lactamase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339891027|gb|EGQ80065.1| metallo-beta-lactamase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 586
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 35 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 65
>gi|260494164|ref|ZP_05814295.1| metal-dependent hydrolase [Fusobacterium sp. 3_1_33]
gi|260198310|gb|EEW95826.1| metal-dependent hydrolase [Fusobacterium sp. 3_1_33]
Length = 608
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 57 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 87
>gi|237744251|ref|ZP_04574732.1| metal dependent hydrolase [Fusobacterium sp. 7_1]
gi|229431480|gb|EEO41692.1| metal dependent hydrolase [Fusobacterium sp. 7_1]
Length = 608
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 57 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 87
>gi|254302946|ref|ZP_04970304.1| metal-dependent hydrolase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323138|gb|EDK88388.1| metal-dependent hydrolase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 631
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ V+P+GGL E+G NC ++ D I++DAG
Sbjct: 80 MYVIPLGGLEEVGKNCTIIQYKDEIIIVDAG 110
>gi|220904137|ref|YP_002479449.1| beta-lactamase domain-containing protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219868436|gb|ACL48771.1| beta-lactamase domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 552
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L + P+GGLGEIG+NC L +++D G
Sbjct: 4 PYLTITPLGGLGEIGLNCQLWETAGGVVMVDCG 36
>gi|406885963|gb|EKD33065.1| hypothetical protein ACD_76C00095G0003 [uncultured bacterium]
Length = 1116
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 61 NYDRYILIDAGDPGFGFQYTNICIFIYNGEFNIQQIDES--PLDGKVFDREALEELSKEG 118
N+DRY L G F +N F + D+S P + ++ +E L ++ +E
Sbjct: 266 NFDRYDLGKVGR------------FKFNMRFGLDSSDDSVTPEEKRILSKEDLVQIVREI 313
Query: 119 VTLVIKNGEMLGVSHLRNRRVLSNG 143
++L I G+ V HL NRRV S G
Sbjct: 314 ISLNISQGDPDDVDHLGNRRVRSVG 338
>gi|451343010|ref|ZP_21912089.1| hypothetical protein HMPREF9943_00314 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449338378|gb|EMD17527.1| hypothetical protein HMPREF9943_00314 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 578
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 42 RVLPIGGLGEIGMNCMLVGNYDRYILIDAGD-------PGFGFQYTNICIFIYNGE 90
R+ +GGL E+G NC +V D I+IDAG PG + + YN +
Sbjct: 30 RIFALGGLNEVGKNCYVVEQDDEIIVIDAGVKFASEGLPGIDYVIPDFSYLKYNSK 85
>gi|427712750|ref|YP_007061374.1| hypothetical protein Syn6312_1673 [Synechococcus sp. PCC 6312]
gi|427376879|gb|AFY60831.1| hypothetical protein Syn6312_1673 [Synechococcus sp. PCC 6312]
Length = 604
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L+++P+GGL EIG N + D IL+DAG
Sbjct: 8 PALKIIPLGGLHEIGKNTCVFEYEDEIILLDAG 40
>gi|363898468|ref|ZP_09324991.1| hypothetical protein HMPREF9625_00008 [Oribacterium sp. ACB1]
gi|395208027|ref|ZP_10397364.1| hypothetical protein HMPREF1145_0422 [Oribacterium sp. ACB8]
gi|361960935|gb|EHL14165.1| hypothetical protein HMPREF9625_00008 [Oribacterium sp. ACB1]
gi|394706235|gb|EJF13754.1| hypothetical protein HMPREF1145_0422 [Oribacterium sp. ACB8]
Length = 737
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 27 RKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGFQYTNICIFI 86
+K + ++GS ++V+P+GGL +IGMN + D I++D G F I + I
Sbjct: 178 KKPKHTFQGS----VKVIPLGGLDQIGMNITAIETEDSMIIVDCGLAFPSFNMLGIDLVI 233
Query: 87 YNGEFNIQQIDE 98
+ + QI +
Sbjct: 234 PDITYIKSQIHK 245
>gi|359414286|ref|ZP_09206751.1| Ribocuclease J [Clostridium sp. DL-VIII]
gi|357173170|gb|EHJ01345.1| Ribocuclease J [Clostridium sp. DL-VIII]
Length = 571
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 40 PLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PL+++P+GGLGEIG N D I+ID G
Sbjct: 23 PLKIIPLGGLGEIGKNMTAFEYKDEIIVIDCG 54
>gi|317968355|ref|ZP_07969745.1| hydrolase of the metallo-beta-lactamase superfamily protein
[Synechococcus sp. CB0205]
Length = 662
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 35 GSNG----PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
G NG P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 7 GRNGAAKQPHLRVIPLGGLHEIGKNTCVFEYGDDIMLVDAG 47
>gi|148555908|ref|YP_001263490.1| beta-lactamase domain-containing protein [Sphingomonas wittichii
RW1]
gi|148501098|gb|ABQ69352.1| beta-lactamase domain protein [Sphingomonas wittichii RW1]
Length = 546
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 38 GPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG----DPGF 75
G L L +GG GEIGMN L G +++++D G DPG+
Sbjct: 5 GNELLFLALGGSGEIGMNVNLYGTQGKWVMVDLGLTFADPGY 46
>gi|291454503|ref|ZP_06593893.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|359148588|ref|ZP_09181726.1| metallo-beta-lactamase superfamily hydrolase [Streptomyces sp.
S4]
gi|421741724|ref|ZP_16179905.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Streptomyces sp. SM8]
gi|291357452|gb|EFE84354.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|406689854|gb|EKC93694.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Streptomyces sp. SM8]
Length = 561
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 9/42 (21%)
Query: 38 GPP-------LRVLPIGGLGEIGMNCMLVGNYD-RYILIDAG 71
GPP LRV P+GGLGEIG N M V YD R +++D G
Sbjct: 9 GPPPKLPKGGLRVTPLGGLGEIGRN-MTVFEYDGRLLIVDCG 49
>gi|188587868|ref|YP_001920895.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum
E3 str. Alaska E43]
gi|188498149|gb|ACD51285.1| metallo-beta-lactamase superfamily protein [Clostridium botulinum
E3 str. Alaska E43]
Length = 554
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N P L+++P+GGLGEIG N D ++ID G
Sbjct: 3 NKPKLKIIPLGGLGEIGKNITAFEYGDEIVVIDCG 37
>gi|172035211|ref|YP_001801712.1| hypothetical protein cce_0295 [Cyanothece sp. ATCC 51142]
gi|354555715|ref|ZP_08975015.1| Ribocuclease J [Cyanothece sp. ATCC 51472]
gi|171696665|gb|ACB49646.1| CHP_MG423-containing protein [Cyanothece sp. ATCC 51142]
gi|353552365|gb|EHC21761.1| Ribocuclease J [Cyanothece sp. ATCC 51472]
Length = 589
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 29 MEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
M Q + SN L+++P+GGL EIG N ++ D ILIDAG
Sbjct: 1 MSQTKKQSN---LKIIPLGGLHEIGKNTCVLEYNDEIILIDAG 40
>gi|410659256|ref|YP_006911627.1| Zn-dependent hydrolase, RNA-metabolising [Dehalobacter sp. DCA]
gi|410662243|ref|YP_006914614.1| Zn-dependent hydrolase, RNA-metabolising [Dehalobacter sp. CF]
gi|409021611|gb|AFV03642.1| Zn-dependent hydrolase, RNA-metabolising [Dehalobacter sp. DCA]
gi|409024599|gb|AFV06629.1| Zn-dependent hydrolase, RNA-metabolising [Dehalobacter sp. CF]
Length = 599
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG N ++ ++ IL+DAG
Sbjct: 7 LQIIPLGGLGEIGKNMTVIRYNNKIILVDAG 37
>gi|440780279|ref|ZP_20958867.1| RNA-metabolising metallo-beta-lactamase [Clostridium pasteurianum
DSM 525]
gi|440221955|gb|ELP61159.1| RNA-metabolising metallo-beta-lactamase [Clostridium pasteurianum
DSM 525]
Length = 556
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N ++V+P+GGLGEIG N + D I+ID G
Sbjct: 5 NKSKIKVIPLGGLGEIGKNITAIEYADEIIVIDCG 39
>gi|83311870|ref|YP_422134.1| metallo-beta-lactamase superfamily hydrolase [Magnetospirillum
magneticum AMB-1]
gi|82946711|dbj|BAE51575.1| Predicted hydrolase of the metallo-beta-lactamase superfamily
[Magnetospirillum magneticum AMB-1]
Length = 549
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG+GEIGMN L G +++++D G
Sbjct: 6 LLFLPLGGVGEIGMNLALYGYDGKWLMVDCG 36
>gi|329936620|ref|ZP_08286327.1| Zn-dependent hydrolase [Streptomyces griseoaurantiacus M045]
gi|329303850|gb|EGG47733.1| Zn-dependent hydrolase [Streptomyces griseoaurantiacus M045]
Length = 561
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 9/42 (21%)
Query: 38 GPP-------LRVLPIGGLGEIGMNCMLVGNYD-RYILIDAG 71
GPP LRV P+GGLGEIG N M V YD R +++D G
Sbjct: 9 GPPSPLPEGGLRVTPLGGLGEIGRN-MTVFEYDGRLLIVDCG 49
>gi|406597141|ref|YP_006748271.1| metallo-beta-lactamase family protein [Alteromonas macleodii ATCC
27126]
gi|406374462|gb|AFS37717.1| metallo-beta-lactamase family protein [Alteromonas macleodii ATCC
27126]
Length = 462
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ +++++D G
Sbjct: 9 LWFLPLGGTGEIGMNLNLYGHDGQWLMVDCG 39
>gi|451818485|ref|YP_007454686.1| ribonuclease J 1 [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451784464|gb|AGF55432.1| ribonuclease J 1 [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 569
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 40 PLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
PL+++P+GGLGEIG N D I+ID G
Sbjct: 21 PLKIIPLGGLGEIGKNMTAFEYNDEIIVIDCG 52
>gi|434388316|ref|YP_007098927.1| hypothetical protein Cha6605_4471 [Chamaesiphon minutus PCC 6605]
gi|428019306|gb|AFY95400.1| hypothetical protein Cha6605_4471 [Chamaesiphon minutus PCC 6605]
Length = 605
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 34 EGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ S+ P L+V+P+GGL EIG N + D +L+DAG
Sbjct: 15 KNSSEPTLKVIPLGGLHEIGKNTCVFEINDEILLLDAG 52
>gi|416395221|ref|ZP_11686296.1| Zn-dependent hydrolase, RNA-metabolising [Crocosphaera watsonii
WH 0003]
gi|357263140|gb|EHJ12182.1| Zn-dependent hydrolase, RNA-metabolising [Crocosphaera watsonii
WH 0003]
Length = 593
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L+++P+GGL EIG N ++ + IL+DAG
Sbjct: 8 PSLKIIPLGGLHEIGKNTCILEYKEEIILVDAG 40
>gi|392382107|ref|YP_005031304.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Azospirillum brasilense Sp245]
gi|356877072|emb|CCC97873.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Azospirillum brasilense Sp245]
Length = 572
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ +++++D G
Sbjct: 27 LYFLPLGGSGEIGMNLNLYGHRGKWLMVDLG 57
>gi|329896592|ref|ZP_08271623.1| Metallo-beta-lactamase family protein, RNA-specific [gamma
proteobacterium IMCC3088]
gi|328921699|gb|EGG29073.1| Metallo-beta-lactamase family protein, RNA-specific [gamma
proteobacterium IMCC3088]
Length = 454
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G R++++D G
Sbjct: 5 LVFLPLGGTGEIGMNLNLYGYKGRWLMVDCG 35
>gi|289423582|ref|ZP_06425383.1| putative ribonuclease J1 [Peptostreptococcus anaerobius 653-L]
gi|289156084|gb|EFD04748.1| putative ribonuclease J1 [Peptostreptococcus anaerobius 653-L]
Length = 556
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+N ++++P+GGL EIG N ++ D I+IDAG
Sbjct: 4 NNNDKIKIIPLGGLNEIGKNMTIIEYKDEIIVIDAG 39
>gi|209964534|ref|YP_002297449.1| metallo-beta-lactamase [Rhodospirillum centenum SW]
gi|209958000|gb|ACI98636.1| metallo-beta-lactamase, putative [Rhodospirillum centenum SW]
Length = 560
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L +P+GG GEIGMN L G+ R++++D G
Sbjct: 17 LYFVPLGGSGEIGMNLNLYGHAGRWLMVDLG 47
>gi|67923141|ref|ZP_00516631.1| Conserved hypothetical protein MG423 [Crocosphaera watsonii WH
8501]
gi|67855039|gb|EAM50308.1| Conserved hypothetical protein MG423 [Crocosphaera watsonii WH
8501]
Length = 593
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L+++P+GGL EIG N ++ + IL+DAG
Sbjct: 8 PSLKIIPLGGLHEIGKNTCILEYKEEIILVDAG 40
>gi|407688093|ref|YP_006803266.1| metallo-beta-lactamase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291473|gb|AFT95785.1| metallo-beta-lactamase family protein [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 462
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ +++++D G
Sbjct: 9 LWFLPLGGTGEIGMNLNLYGHDGQWLMVDCG 39
>gi|357392225|ref|YP_004907066.1| hypothetical protein KSE_53350 [Kitasatospora setae KM-6054]
gi|311898702|dbj|BAJ31110.1| hypothetical protein KSE_53350 [Kitasatospora setae KM-6054]
Length = 561
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LR+ P+GGLGEIG N ++ DR +++D G
Sbjct: 19 LRITPLGGLGEIGRNMTVLEYGDRILIVDCG 49
>gi|254417095|ref|ZP_05030841.1| conserved hypothetical protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176073|gb|EDX71091.1| conserved hypothetical protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 597
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ P L+++P+GGL EIG N + D IL+DAG
Sbjct: 16 SSPALKIIPLGGLHEIGKNTCIFEFNDEIILLDAG 50
>gi|407684158|ref|YP_006799332.1| metallo-beta-lactamase family protein [Alteromonas macleodii str.
'English Channel 673']
gi|407245769|gb|AFT74955.1| metallo-beta-lactamase family protein [Alteromonas macleodii str.
'English Channel 673']
Length = 462
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ +++++D G
Sbjct: 9 LWFLPLGGTGEIGMNLNLYGHDGQWLMVDCG 39
>gi|240141823|ref|YP_002966331.1| Beta-lactamase family protein [Methylobacterium extorquens AM1]
gi|240011765|gb|ACS42990.1| Beta-lactamase family protein [Methylobacterium extorquens AM1]
Length = 528
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 32 FYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
F+ ++ + V+ IGG+G IG N G+ R++L+DAG
Sbjct: 32 FFPATDAESVVVMTIGGIGAIGSNWTAYGHTGRWLLVDAG 71
>gi|254430134|ref|ZP_05043837.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197624587|gb|EDY37146.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 677
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 15 PALRVIPLGGLHEIGKNTCVFEYGDDIMLVDAG 47
>gi|418057781|ref|ZP_12695767.1| beta-lactamase family protein [Methylobacterium extorquens DSM
13060]
gi|373568734|gb|EHP94677.1| beta-lactamase family protein [Methylobacterium extorquens DSM
13060]
Length = 528
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 32 FYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
F+ ++ + V+ IGG+G IG N G+ R++L+DAG
Sbjct: 32 FFPATDAESVVVMTIGGIGAIGSNWTAYGHAGRWLLVDAG 71
>gi|87123280|ref|ZP_01079131.1| hypothetical protein RS9917_05455 [Synechococcus sp. RS9917]
gi|86169000|gb|EAQ70256.1| hypothetical protein RS9917_05455 [Synechococcus sp. RS9917]
Length = 669
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 18 PTLRVIPLGGLHEIGKNTCVFEYGDDLMLVDAG 50
>gi|443320144|ref|ZP_21049265.1| hypothetical protein GLO73106DRAFT_00036040 [Gloeocapsa sp. PCC
73106]
gi|442790140|gb|ELR99752.1| hypothetical protein GLO73106DRAFT_00036040 [Gloeocapsa sp. PCC
73106]
Length = 588
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 25 VQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+++K EQ P L+++P+GGL EIG N + D IL+DAG
Sbjct: 1 MRKKTEQ------KPNLKIIPLGGLHEIGKNTCVFEYEDEIILLDAG 41
>gi|89053690|ref|YP_509141.1| beta-lactamase-like protein [Jannaschia sp. CCS1]
gi|88863239|gb|ABD54116.1| beta-lactamase-like protein [Jannaschia sp. CCS1]
Length = 558
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
Query: 44 LPIGGLGEIGMNCMLVG----NYDRYILIDAG 71
LPIGG GEIGMNC + G +R I++D G
Sbjct: 10 LPIGGAGEIGMNCYVYGYGPEGQERLIVVDTG 41
>gi|408906352|emb|CCM11822.1| Zn-dependent hydrolase, RNA-metabolising [Helicobacter heilmannii
ASB1.4]
Length = 674
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+++ P+GGLGEIG N M++ ++ I+ID G
Sbjct: 127 VKITPLGGLGEIGGNMMVIETMNQAIIIDVG 157
>gi|350564039|ref|ZP_08932858.1| RNA-metabolising metallo-beta-lactamase [Thioalkalimicrobium
aerophilum AL3]
gi|349778039|gb|EGZ32398.1| RNA-metabolising metallo-beta-lactamase [Thioalkalimicrobium
aerophilum AL3]
Length = 456
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 44 LPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGFQ 78
LP+GG+GEIG N ML + +Y+++D G GF+
Sbjct: 21 LPLGGVGEIGQNMMLYAHDGQYLMVDC---GLGFE 52
>gi|428223750|ref|YP_007107847.1| RNA-metabolising metallo-beta-lactamase [Geitlerinema sp. PCC
7407]
gi|427983651|gb|AFY64795.1| RNA-metabolising metallo-beta-lactamase [Geitlerinema sp. PCC
7407]
Length = 587
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGD--PGFGFQYTNICI 84
P L+V+P+GGL EIG N + D +L+DAG P G NI +
Sbjct: 8 PALKVIPLGGLHEIGKNTCVFEINDEIMLLDAGLAFPTDGMHGVNIVL 55
>gi|320161309|ref|YP_004174533.1| hypothetical protein ANT_19070 [Anaerolinea thermophila UNI-1]
gi|319995162|dbj|BAJ63933.1| hypothetical protein ANT_19070 [Anaerolinea thermophila UNI-1]
Length = 548
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYIL-IDAG 71
SNG LRV+P+GGLGE+G N M V YD IL +DAG
Sbjct: 2 SNGI-LRVIPLGGLGEVGRNLM-VYEYDNEILVVDAG 36
>gi|144900802|emb|CAM77666.1| metallo-beta-lactamase superfamily protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 557
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ +++++D G
Sbjct: 8 LIFLPLGGAGEIGMNMNLYGHDGKWLMVDVG 38
>gi|220909720|ref|YP_002485031.1| beta-lactamase domain-containing protein [Cyanothece sp. PCC
7425]
gi|219866331|gb|ACL46670.1| beta-lactamase domain protein [Cyanothece sp. PCC 7425]
Length = 583
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L+++P+GGL EIG N + D IL+DAG
Sbjct: 7 PTLKIIPLGGLHEIGKNTCVFEFEDEIILLDAG 39
>gi|298244005|ref|ZP_06967812.1| RNA-metabolising metallo-beta-lactamase [Ktedonobacter racemifer
DSM 44963]
gi|297557059|gb|EFH90923.1| RNA-metabolising metallo-beta-lactamase [Ktedonobacter racemifer
DSM 44963]
Length = 553
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+RV+P+GGLGEIG N M++ D +++D G
Sbjct: 6 IRVVPLGGLGEIGKNMMVIEYGDDILIVDVG 36
>gi|134299670|ref|YP_001113166.1| beta-lactamase domain-containing protein [Desulfotomaculum
reducens MI-1]
gi|134052370|gb|ABO50341.1| RNase J1 [Desulfotomaculum reducens MI-1]
Length = 559
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ P L V+P+GGLGEIG N V + ILID G
Sbjct: 2 AKQPALAVIPLGGLGEIGKNMTAVRYGEHIILIDCG 37
>gi|148643098|ref|YP_001273611.1| metal-dependent RNase [Methanobrevibacter smithii ATCC 35061]
gi|148552115|gb|ABQ87243.1| predicted metal-dependent RNase [Methanobrevibacter smithii ATCC
35061]
Length = 636
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 18 RKSMEDSVQRKMEQFYEGSNGPP--LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG---- 71
RK M +QR Q ++G+ P RV +GG E+G + ML+ + +L+D G
Sbjct: 158 RKKM---LQRLGRQIHQGTKHPNDWARVTSMGGFKEVGRSSMLLQTPNSRVLLDCGVNVA 214
Query: 72 --DPGFGFQYTNICIFIYNGEFNIQQID 97
D F Y N+ EF+I+++D
Sbjct: 215 ASDNKNAFPYLNV------PEFSIEELD 236
>gi|322379601|ref|ZP_08053938.1| UPF0036 protein [Helicobacter suis HS1]
gi|322380212|ref|ZP_08054443.1| ATP-binding metallo-beta-lactamase [Helicobacter suis HS5]
gi|321147378|gb|EFX42047.1| ATP-binding metallo-beta-lactamase [Helicobacter suis HS5]
gi|321147995|gb|EFX42558.1| UPF0036 protein [Helicobacter suis HS1]
Length = 658
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+++ P+GGLGEIG N M++ ++ I+ID G
Sbjct: 111 VKITPLGGLGEIGGNMMVIETLNQAIIIDVG 141
>gi|374315348|ref|YP_005061776.1| sugar ABC transporter periplasmic protein [Sphaerochaeta pleomorpha
str. Grapes]
gi|359350992|gb|AEV28766.1| ABC-type sugar transport system, periplasmic component
[Sphaerochaeta pleomorpha str. Grapes]
Length = 434
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 63 DRYI-------LIDAGDPGFGFQYTNICIFIYNGEFNIQQIDESPLDGKVFDREALEELS 115
DRYI ++D G G +YTN+C+F+ N Q E+ LD + + EE+
Sbjct: 127 DRYIPGSLEAVMLDGGIHGLPLEYTNLCLFV-----NKQIFREAGLDAEKDYPKTWEEVM 181
Query: 116 KEGVTLVIKNGEML 129
LV +NGE++
Sbjct: 182 SLSEKLVQRNGEII 195
>gi|258516306|ref|YP_003192528.1| beta-lactamase domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257780011|gb|ACV63905.1| beta-lactamase domain protein [Desulfotomaculum acetoxidans DSM
771]
Length = 554
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ P L ++P+GGLGEIG N M+V + ++ID+G
Sbjct: 2 ARDPKLSLIPLGGLGEIGKNMMVVRYGENLLIIDSG 37
>gi|317126116|ref|YP_004100228.1| RNA-metabolising metallo-beta-lactamase [Intrasporangium calvum
DSM 43043]
gi|315590204|gb|ADU49501.1| RNA-metabolising metallo-beta-lactamase [Intrasporangium calvum
DSM 43043]
Length = 565
Score = 36.2 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LRV+P+GGLGEIG N + + R +++D G
Sbjct: 22 LRVVPLGGLGEIGRNMTVFEHAGRLLIVDCG 52
>gi|387127983|ref|YP_006296588.1| metallo-beta-lactamase-like protein [Methylophaga sp. JAM1]
gi|386275045|gb|AFI84943.1| Metallo-beta-lactamase-like protein [Methylophaga sp. JAM1]
Length = 458
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 44 LPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LP+GG GEIGMN + G+ R++++D G
Sbjct: 11 LPLGGCGEIGMNLNVYGHNGRWLIVDCG 38
>gi|375087239|ref|ZP_09733621.1| hypothetical protein HMPREF9454_02232 [Megamonas funiformis YIT
11815]
gi|374562056|gb|EHR33391.1| hypothetical protein HMPREF9454_02232 [Megamonas funiformis YIT
11815]
Length = 555
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG N +V D I+IDAG
Sbjct: 8 LQIIPLGGLGEIGKNMTVVRYGDDIIVIDAG 38
>gi|222445335|ref|ZP_03607850.1| hypothetical protein METSMIALI_00963 [Methanobrevibacter smithii
DSM 2375]
gi|261350104|ref|ZP_05975521.1| putative mRNA 3-end processing factor [Methanobrevibacter smithii
DSM 2374]
gi|222434900|gb|EEE42065.1| arCOG00543 universal archaeal KH-domain/beta-lactamase-domain
protein [Methanobrevibacter smithii DSM 2375]
gi|288860890|gb|EFC93188.1| putative mRNA 3-end processing factor [Methanobrevibacter smithii
DSM 2374]
Length = 636
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 18 RKSMEDSVQRKMEQFYEGSNGPP--LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG---- 71
RK M +QR Q ++G+ P RV +GG E+G + ML+ + +L+D G
Sbjct: 158 RKKM---LQRLGRQIHQGTKHPNDWARVTSMGGFKEVGRSSMLLQTPNSRVLLDCGVNVA 214
Query: 72 --DPGFGFQYTNICIFIYNGEFNIQQID 97
D F Y N+ EF+I+++D
Sbjct: 215 ASDNKNAFPYLNV------PEFSIEELD 236
>gi|333909286|ref|YP_004482872.1| RNA-metabolising metallo-beta-lactamase [Marinomonas posidonica
IVIA-Po-181]
gi|333479292|gb|AEF55953.1| RNA-metabolising metallo-beta-lactamase [Marinomonas posidonica
IVIA-Po-181]
Length = 450
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ +++++D G
Sbjct: 11 LWFLPLGGTGEIGMNMNLYGHDGQWLMVDCG 41
>gi|150018945|ref|YP_001311199.1| beta-lactamase domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149905410|gb|ABR36243.1| beta-lactamase domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 571
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 79 YTNICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKNG 126
+T I + +++G+F ++D +P+DGKV D + +L K+GV L++ +
Sbjct: 168 HTPIGVIVHSGDF---KVDFTPIDGKVMDLQRYAQLGKKGVLLLMADS 212
>gi|365174948|ref|ZP_09362386.1| hypothetical protein HMPREF1006_00331 [Synergistes sp. 3_1_syn1]
gi|363613813|gb|EHL65318.1| hypothetical protein HMPREF1006_00331 [Synergistes sp. 3_1_syn1]
Length = 569
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L V P+GG+GEIG N + G D YI++D G
Sbjct: 21 LFVCPLGGMGEIGKNLTVFGYGDDYIIVDCG 51
>gi|329121653|ref|ZP_08250273.1| metallo-beta-lactamase [Dialister micraerophilus DSM 19965]
gi|327468513|gb|EGF13993.1| metallo-beta-lactamase [Dialister micraerophilus DSM 19965]
Length = 553
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGE+G N M++ D +++D+G
Sbjct: 6 LQIIPLGGLGEVGKNMMVIRYEDEIVVVDSG 36
>gi|298529119|ref|ZP_07016522.1| RNA-metabolising metallo-beta-lactamase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510555|gb|EFI34458.1| RNA-metabolising metallo-beta-lactamase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 552
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 45 PIGGLGEIGMNCMLVGNYDRYILIDAG 71
P+GGLGEIG NCM++ +LID G
Sbjct: 12 PLGGLGEIGQNCMVLETPGTMVLIDCG 38
>gi|323140799|ref|ZP_08075715.1| ribonuclease J 1 [Phascolarctobacterium succinatutens YIT 12067]
gi|322414715|gb|EFY05518.1| ribonuclease J 1 [Phascolarctobacterium succinatutens YIT 12067]
Length = 580
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 32 FYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
F+ G ++++P+GGLGEIG N + D ILIDAG
Sbjct: 25 FFLGKFQHKVQIIPLGGLGEIGKNMTVFRYGDDMILIDAG 64
>gi|313892289|ref|ZP_07825882.1| ribonuclease J 1 [Dialister microaerophilus UPII 345-E]
gi|313119427|gb|EFR42626.1| ribonuclease J 1 [Dialister microaerophilus UPII 345-E]
Length = 553
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGE+G N M++ D +++D+G
Sbjct: 6 LQIIPLGGLGEVGKNMMVIRYEDEIVVVDSG 36
>gi|296129377|ref|YP_003636627.1| RNA-metabolising metallo-beta-lactamase [Cellulomonas flavigena
DSM 20109]
gi|296021192|gb|ADG74428.1| RNA-metabolising metallo-beta-lactamase [Cellulomonas flavigena
DSM 20109]
Length = 561
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LRV+P+GGLGE+G N ++ + R ++ID G
Sbjct: 19 LRVVPLGGLGEVGRNMAVLEHAGRLLVIDCG 49
>gi|411119399|ref|ZP_11391779.1| hypothetical protein OsccyDRAFT_3320 [Oscillatoriales
cyanobacterium JSC-12]
gi|410711262|gb|EKQ68769.1| hypothetical protein OsccyDRAFT_3320 [Oscillatoriales
cyanobacterium JSC-12]
Length = 587
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGD--PGFGFQYTNICI 84
P L+++P+GGL EIG N + D +L+DAG P G NI +
Sbjct: 8 PTLKIIPLGGLHEIGKNTCVFEINDELLLLDAGLAFPTDGMHGVNIVL 55
>gi|110680445|ref|YP_683452.1| metallo-beta-lactamase family protein [Roseobacter denitrificans
OCh 114]
gi|109456561|gb|ABG32766.1| metallo-beta-lactamase family protein [Roseobacter denitrificans
OCh 114]
Length = 555
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 86 IYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVI 123
I++G+F ++DE+PL G+ FD E E+SKEGV +I
Sbjct: 162 IHSGDF---KLDETPLVGEAFDPELWAEVSKEGVKALI 196
>gi|407473800|ref|YP_006788200.1| RNA-metabolising metallo-beta-lactamase [Clostridium acidurici
9a]
gi|407050308|gb|AFS78353.1| RNA-metabolising metallo-beta-lactamase [Clostridium acidurici
9a]
Length = 553
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 38 GPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LR++P+GGL E+G N ++ D I+ID G
Sbjct: 5 SPKLRIIPLGGLYEVGKNITVIEYNDEIIVIDCG 38
>gi|429765337|ref|ZP_19297636.1| hypothetical protein HMPREF0216_01365 [Clostridium celatum DSM
1785]
gi|429186617|gb|EKY27555.1| hypothetical protein HMPREF0216_01365 [Clostridium celatum DSM
1785]
Length = 553
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R++P+GGLGEIG N ++ D I+ID G
Sbjct: 6 VRIIPLGGLGEIGKNITVIECNDEIIVIDCG 36
>gi|365135124|ref|ZP_09343649.1| hypothetical protein HMPREF1032_01445 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363613094|gb|EHL64618.1| hypothetical protein HMPREF1032_01445 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 624
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 35 GSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
G+ P++++P+GGLGE+G N L IL+D G
Sbjct: 70 GTPAVPVKIMPLGGLGEVGKNITLYECQGDMILVDCG 106
>gi|300854406|ref|YP_003779390.1| metal-dependent hydrolase [Clostridium ljungdahlii DSM 13528]
gi|300434521|gb|ADK14288.1| predicted metal-dependent hydrolase [Clostridium ljungdahlii DSM
13528]
Length = 555
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 79 YTNICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIKN 125
+T I I + G+F ++D +P+DG V D L EL K+GV L++ +
Sbjct: 152 HTPIGIIFHTGDF---KVDYTPIDGSVIDFARLAELGKKGVILMLAD 195
>gi|229820951|ref|YP_002882477.1| beta-lactamase [Beutenbergia cavernae DSM 12333]
gi|229566864|gb|ACQ80715.1| beta-lactamase domain protein [Beutenbergia cavernae DSM 12333]
Length = 561
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 15/74 (20%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYD-RYILIDAGDPGFGFQYTNICIFIYNGEFNIQQI--D 97
LR++P+GGLGE+G N M V YD R +++D G +F + + + I D
Sbjct: 19 LRIVPLGGLGEVGRN-MAVFEYDGRLLIVDCG-----------VLFPEDHQPGVDLILPD 66
Query: 98 ESPLDGKVFDREAL 111
S LDG++ D EA+
Sbjct: 67 FSYLDGRLDDIEAI 80
>gi|152994929|ref|YP_001339764.1| beta-lactamase domain-containing protein [Marinomonas sp. MWYL1]
gi|150835853|gb|ABR69829.1| beta-lactamase domain protein [Marinomonas sp. MWYL1]
Length = 447
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ +++++D G
Sbjct: 8 LWFLPLGGTGEIGMNMNLYGHDGQWLMVDCG 38
>gi|381167328|ref|ZP_09876536.1| Putative hydrolase of the metallo-beta-lactamase superfamily
[Phaeospirillum molischianum DSM 120]
gi|380683636|emb|CCG41348.1| Putative hydrolase of the metallo-beta-lactamase superfamily
[Phaeospirillum molischianum DSM 120]
Length = 553
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 29 MEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
M F EG+ L LP+GG GEIGMN L G +++++D G
Sbjct: 1 MTYFPEGNE---LYYLPLGGAGEIGMNLSLYGYDGQWLMVDLG 40
>gi|148238410|ref|YP_001223797.1| metallo-beta-lactamase superfamily hydrolase [Synechococcus sp.
WH 7803]
gi|147846949|emb|CAK22500.1| Predicted hydrolase of the metallo-beta-lactamase superfamily
[Synechococcus sp. WH 7803]
Length = 680
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 12 PCLRVIPLGGLHEIGKNTCVFEYGDDLMLVDAG 44
>gi|452750680|ref|ZP_21950427.1| Metallo-beta-lactamase family protein, RNA-specific [alpha
proteobacterium JLT2015]
gi|451961874|gb|EMD84283.1| Metallo-beta-lactamase family protein, RNA-specific [alpha
proteobacterium JLT2015]
Length = 547
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Query: 44 LPIGGLGEIGMNCMLVGNYDRYILIDAG----DPGF 75
LP+GG GEIGMN L G ++I++D G DP +
Sbjct: 10 LPLGGSGEIGMNVNLYGCQGKWIMVDLGMTFSDPAY 45
>gi|403251192|ref|ZP_10917547.1| putative hydrolase of the metallo-beta-lactamase superfamily
[actinobacterium SCGC AAA027-L06]
gi|402915483|gb|EJX36451.1| putative hydrolase of the metallo-beta-lactamase superfamily
[actinobacterium SCGC AAA027-L06]
Length = 560
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 84 IFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVI 123
+ ++ G+F ++D+ PLDGKV D E L KEGV L +
Sbjct: 167 VILHTGDF---KMDKMPLDGKVTDLETFARLGKEGVDLFL 203
>gi|88809956|ref|ZP_01125461.1| hypothetical protein WH7805_09087 [Synechococcus sp. WH 7805]
gi|88786146|gb|EAR17308.1| hypothetical protein WH7805_09087 [Synechococcus sp. WH 7805]
Length = 679
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 11 PCLRVIPLGGLHEIGKNTCVFEYGDDLMLVDAG 43
>gi|374997024|ref|YP_004972523.1| hypothetical protein Desor_4604 [Desulfosporosinus orientis DSM
765]
gi|357215390|gb|AET70008.1| conserved hypothetical protein [Desulfosporosinus orientis DSM
765]
Length = 554
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG N ++ ++ +LIDAG
Sbjct: 7 LQIIPLGGLGEIGKNMTVIRYDNQMVLIDAG 37
>gi|78183650|ref|YP_376084.1| hypothetical protein Syncc9902_0066 [Synechococcus sp. CC9902]
gi|78167944|gb|ABB25041.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Length = 690
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 13 PCLRVIPLGGLHEIGKNTCVFEYGDDLMLVDAG 45
>gi|33862208|ref|NP_893769.1| hypothetical protein PMM1652 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33634426|emb|CAE20111.1| conserved hypothetical protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 667
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG--DPGFGFQYTNICI 84
P L+++P+GGL EIG N + D ILID G P G N+ +
Sbjct: 23 PALKIIPLGGLHEIGKNTCVFEYQDDIILIDGGLAFPSDGMHGVNVVM 70
>gi|116071736|ref|ZP_01469004.1| hypothetical protein BL107_06289 [Synechococcus sp. BL107]
gi|116065359|gb|EAU71117.1| hypothetical protein BL107_06289 [Synechococcus sp. BL107]
Length = 690
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 13 PCLRVIPLGGLHEIGKNTCVFEYGDDLMLVDAG 45
>gi|342211093|ref|ZP_08703829.1| hypothetical beta-CASP family DNA/RNA hydrolase [Mycoplasma
anatis 1340]
gi|341578540|gb|EGS28913.1| hypothetical beta-CASP family DNA/RNA hydrolase [Mycoplasma
anatis 1340]
Length = 627
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 40 PLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P R++P+GG+ EIG +L+ D LIDAG
Sbjct: 3 PTRIIPLGGVQEIGKATLLIEQDDHIFLIDAG 34
>gi|147677624|ref|YP_001211839.1| hydrolase [Pelotomaculum thermopropionicum SI]
gi|146273721|dbj|BAF59470.1| predicted hydrolase [Pelotomaculum thermopropionicum SI]
Length = 554
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
Query: 79 YTNICIFIYNGEFNIQQIDESPLDGKVFDREALEELSKEGVTLVIK---NGEMLGVSHLR 135
+T + + ++ G+F +ID++P+DG+V D + L +L ++GV +++ N E G +
Sbjct: 151 HTPLGVVLHTGDF---KIDQTPVDGQVTDFQRLAQLGEKGVLVLLSDSTNAERPG--YTM 205
Query: 136 NRRVLSNGF 144
+ RV+ N F
Sbjct: 206 SERVVGNTF 214
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P L ++P+GGLGEIG N M+V + +L+D G
Sbjct: 5 PKLSLIPLGGLGEIGKNMMVVRFGENILLVDCG 37
>gi|33864604|ref|NP_896163.1| hypothetical protein SYNW0068 [Synechococcus sp. WH 8102]
gi|33632127|emb|CAE06583.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 678
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 13 PCLRVIPLGGLHEIGKNTCVFEYGDDLMLVDAG 45
>gi|315641416|ref|ZP_07896490.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus
DSM 15952]
gi|315482852|gb|EFU73374.1| metallo-beta-lactamase superfamily protein [Enterococcus italicus
DSM 15952]
Length = 567
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 19/29 (65%)
Query: 43 VLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
V IGGLGEIG NC V D ILIDAG
Sbjct: 12 VFGIGGLGEIGKNCYGVQFQDEIILIDAG 40
>gi|317121874|ref|YP_004101877.1| RNA-metabolising metallo-beta-lactamase [Thermaerobacter
marianensis DSM 12885]
gi|315591854|gb|ADU51150.1| RNA-metabolising metallo-beta-lactamase [Thermaerobacter
marianensis DSM 12885]
Length = 589
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 38 GPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
G + ++P+GGLGEIG N M++ I+IDAG
Sbjct: 39 GSAVTIVPLGGLGEIGKNMMVLETEQDLIVIDAG 72
>gi|392426742|ref|YP_006467736.1| hypothetical protein Desaci_3523 [Desulfosporosinus acidiphilus
SJ4]
gi|391356705|gb|AFM42404.1| hypothetical protein Desaci_3523 [Desulfosporosinus acidiphilus
SJ4]
Length = 554
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG N ++ ++ +LIDAG
Sbjct: 7 LQIIPLGGLGEIGKNMTVIRYDNQMVLIDAG 37
>gi|352517147|ref|YP_004886464.1| ribonuclease J [Tetragenococcus halophilus NBRC 12172]
gi|348601254|dbj|BAK94300.1| ribonuclease J [Tetragenococcus halophilus NBRC 12172]
Length = 559
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 43 VLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
V +GGLGEIG NC V D +LIDAG
Sbjct: 12 VFAVGGLGEIGKNCYGVQFQDEIVLIDAG 40
>gi|452850723|ref|YP_007492407.1| Beta-lactamase domain protein [Desulfovibrio piezophilus]
gi|451894377|emb|CCH47256.1| Beta-lactamase domain protein [Desulfovibrio piezophilus]
Length = 551
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG-----DPGFGFQYTNIC 83
L + P+GGLGEIGMNCM L+D G D FG C
Sbjct: 6 LSLYPLGGLGEIGMNCMAYVTDRSMALVDCGLMFPEDYHFGVDVVIPC 53
>gi|318043037|ref|ZP_07974993.1| hypothetical protein SCB01_15091 [Synechococcus sp. CB0101]
Length = 658
Score = 35.8 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 8 PCLRVIPLGGLHEIGKNTCVFEYGDDIMLVDAG 40
>gi|158313052|ref|YP_001505560.1| beta-lactamase domain-containing protein [Frankia sp. EAN1pec]
gi|158108457|gb|ABW10654.1| beta-lactamase domain protein [Frankia sp. EAN1pec]
Length = 561
Score = 35.8 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LR++P+GGLGEIG N + + R +++D G
Sbjct: 19 LRIIPLGGLGEIGRNMTVFEHAGRLLIVDCG 49
>gi|336436652|ref|ZP_08616364.1| hypothetical protein HMPREF0988_01949 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336007517|gb|EGN37542.1| hypothetical protein HMPREF0988_01949 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 556
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 32 FYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
F + N LR++P+GGL +IGMN D I++D G
Sbjct: 2 FVKKQNNGKLRIIPLGGLEQIGMNITAFEYEDSIIVVDCG 41
>gi|13358135|ref|NP_078409.1| hypothetical protein UU570 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|170762027|ref|YP_001752655.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum
serovar 3 str. ATCC 27815]
gi|171920343|ref|ZP_02931681.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum
serovar 1 str. ATCC 27813]
gi|183508524|ref|ZP_02958048.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum
serovar 14 str. ATCC 33697]
gi|11278692|pir||G82874 conserved hypothetical UU570 [imported] - Ureaplasma urealyticum
gi|6899578|gb|AAF30984.1|AE002155_6 conserved hypothetical [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168827604|gb|ACA32866.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum
serovar 3 str. ATCC 27815]
gi|171902767|gb|EDT49056.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum
serovar 1 str. ATCC 27813]
gi|182675961|gb|EDT87866.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum
serovar 14 str. ATCC 33697]
Length = 596
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 34 EGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGD-------PGFGFQYTNICIFI 86
E + P V +GGL EIG N +V + D ILIDAG PGF N I
Sbjct: 2 ENTKKSPTYVYALGGLEEIGKNTYVVEHEDEIILIDAGIKFANASLPGFDGTVANFDYLI 61
Query: 87 YN 88
N
Sbjct: 62 KN 63
>gi|452964808|gb|EME69841.1| metallo-beta-lactamase superfamily hydrolase [Magnetospirillum
sp. SO-1]
Length = 549
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 44 LPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LP+GG+GEIGMN L G +++++D G
Sbjct: 9 LPLGGVGEIGMNLALYGYGGQWLMVDCG 36
>gi|339627964|ref|YP_004719607.1| beta-lactamase domain-containing protein [Sulfobacillus
acidophilus TPY]
gi|379007597|ref|YP_005257048.1| ribocuclease J [Sulfobacillus acidophilus DSM 10332]
gi|339285753|gb|AEJ39864.1| beta-lactamase domain protein [Sulfobacillus acidophilus TPY]
gi|361053859|gb|AEW05376.1| Ribocuclease J [Sulfobacillus acidophilus DSM 10332]
Length = 568
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 26 QRKMEQFYEGSNGPPLRVLPIGGLGEIGMN-CMLVGNYDRYILIDAG-------DPGFGF 77
+R++E L+ +P+GGLGEIG N +LV N D ILIDAG PG
Sbjct: 6 EREVEPLASRPGPGKLQFIPLGGLGEIGKNLALLVVNQD-IILIDAGLAFPEEDMPGIDI 64
Query: 78 QYTNICIFIYNGE 90
+I I N E
Sbjct: 65 VLPDITYLIENKE 77
>gi|126659069|ref|ZP_01730209.1| hypothetical protein CY0110_04648 [Cyanothece sp. CCY0110]
gi|126619597|gb|EAZ90326.1| hypothetical protein CY0110_04648 [Cyanothece sp. CCY0110]
Length = 589
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGL EIG N ++ D ILIDAG
Sbjct: 10 LKIIPLGGLHEIGKNTCVLEYNDEIILIDAG 40
>gi|210622577|ref|ZP_03293259.1| hypothetical protein CLOHIR_01207 [Clostridium hiranonis DSM
13275]
gi|210154160|gb|EEA85166.1| hypothetical protein CLOHIR_01207 [Clostridium hiranonis DSM
13275]
Length = 557
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
N ++V+P+GG+ EIG N ++ D I+IDAG
Sbjct: 6 NDEQIKVIPLGGMNEIGKNMTVIEYRDEIIIIDAG 40
>gi|78211624|ref|YP_380403.1| hypothetical protein Syncc9605_0069 [Synechococcus sp. CC9605]
gi|78196083|gb|ABB33848.1| conserved hypothetical protein [Synechococcus sp. CC9605]
Length = 679
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 13 PCLRVIPLGGLHEIGKNTCVFEYGDDLMLVDAG 45
>gi|325290341|ref|YP_004266522.1| ribocuclease J [Syntrophobotulus glycolicus DSM 8271]
gi|324965742|gb|ADY56521.1| Ribocuclease J [Syntrophobotulus glycolicus DSM 8271]
Length = 554
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGE+G N ++ ++ ILIDAG
Sbjct: 7 LQIIPLGGLGEVGKNMTVIRYGNQMILIDAG 37
>gi|410478465|ref|YP_006766102.1| metallo-beta-lactamase superfamily hydrolase [Leptospirillum
ferriphilum ML-04]
gi|424866263|ref|ZP_18290104.1| Metallo-beta-lactamase family protein [Leptospirillum sp. Group
II 'C75']
gi|124515834|gb|EAY57343.1| Metallo-beta-lactamase family protein [Leptospirillum rubarum]
gi|387223060|gb|EIJ77432.1| Metallo-beta-lactamase family protein [Leptospirillum sp. Group
II 'C75']
gi|406773717|gb|AFS53142.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Leptospirillum ferriphilum ML-04]
Length = 562
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P +R++P+GG+GEIGMN D +++D G
Sbjct: 13 PWVRIIPLGGIGEIGMNMTAYETPDGIVVVDCG 45
>gi|383754405|ref|YP_005433308.1| putative ribonuclease J 1 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366457|dbj|BAL83285.1| putative ribonuclease J 1 [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 553
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
S L+++P+GGLGEIG N +V D ++ID+G
Sbjct: 2 SKAQKLQIIPLGGLGEIGKNMTVVRVEDEILVIDSG 37
>gi|306818232|ref|ZP_07451962.1| metallo-beta-lactamase [Mobiluncus mulieris ATCC 35239]
gi|304648971|gb|EFM46266.1| metallo-beta-lactamase [Mobiluncus mulieris ATCC 35239]
Length = 564
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LR++P+GGLGE+G N M++ + ++ID G
Sbjct: 19 LRLVPLGGLGEVGRNMMVLETEGKILIIDCG 49
>gi|170742526|ref|YP_001771181.1| beta-lactamase domain-containing protein [Methylobacterium sp.
4-46]
gi|168196800|gb|ACA18747.1| beta-lactamase domain protein [Methylobacterium sp. 4-46]
Length = 557
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVG----NYDRYILIDAG 71
+ G L +P+GG+GEIGMN L G N ++I++D G
Sbjct: 3 TKGDELVFVPLGGVGEIGMNAALYGYGPPNSRKWIMVDCG 42
>gi|88706452|ref|ZP_01104157.1| metallo-beta-lactamase family protein [Congregibacter litoralis
KT71]
gi|88699388|gb|EAQ96502.1| metallo-beta-lactamase family protein [Congregibacter litoralis
KT71]
Length = 460
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG GEIGMN L G+ ++++D G
Sbjct: 9 LWFLPLGGCGEIGMNLNLYGHNGAWLMVDCG 39
>gi|206602078|gb|EDZ38560.1| Metallo-beta-lactamase family protein [Leptospirillum sp. Group
II '5-way CG']
Length = 562
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P +R++P+GG+GEIGMN D +++D G
Sbjct: 13 PWVRIIPLGGIGEIGMNMTAYETPDGIVVVDCG 45
>gi|114566794|ref|YP_753948.1| metallo-beta-lactamase family protein [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114337729|gb|ABI68577.1| metallo-beta-lactamase family protein [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 553
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
++++P+GGLGEIG N + D ++IDAG
Sbjct: 7 IKIIPLGGLGEIGKNMTAIRYQDSIVIIDAG 37
>gi|313143542|ref|ZP_07805735.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128573|gb|EFR46190.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 701
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R+ P+GGLGEIG N ++ D I+ID G
Sbjct: 156 VRITPLGGLGEIGGNITVIETQDSAIVIDVG 186
>gi|374986117|ref|YP_004961612.1| metallo-beta-lactamase family hydrolase [Streptomyces
bingchenggensis BCW-1]
gi|297156769|gb|ADI06481.1| metallo-beta-lactamase family hydrolase [Streptomyces
bingchenggensis BCW-1]
Length = 561
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Query: 38 GPP-------LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
GPP LRV+P+GGLGEIG N + R +++D G
Sbjct: 9 GPPPKLPEGGLRVIPLGGLGEIGRNMTVFEYGGRLLIVDCG 49
>gi|269976490|ref|ZP_06183475.1| ribonuclease J [Mobiluncus mulieris 28-1]
gi|307701733|ref|ZP_07638747.1| putative ribonuclease J 1 [Mobiluncus mulieris FB024-16]
gi|269935291|gb|EEZ91840.1| ribonuclease J [Mobiluncus mulieris 28-1]
gi|307612991|gb|EFN92246.1| putative ribonuclease J 1 [Mobiluncus mulieris FB024-16]
Length = 564
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LR++P+GGLGE+G N M++ + ++ID G
Sbjct: 19 LRLVPLGGLGEVGRNMMVLETEGKILIIDCG 49
>gi|124021789|ref|YP_001016096.1| hydrolase of the metallo-beta-lactamase superfamily protein
[Prochlorococcus marinus str. MIT 9303]
gi|123962075|gb|ABM76831.1| Predicted hydrolase of the metallo-beta-lactamase superfamily
protein [Prochlorococcus marinus str. MIT 9303]
Length = 667
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +++DAG
Sbjct: 21 PCLRVIPLGGLHEIGKNTCVFEYGDEIMMVDAG 53
>gi|408827684|ref|ZP_11212574.1| RNA-metabolising metallo-beta-lactamase [Streptomyces somaliensis
DSM 40738]
Length = 561
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYD-RYILIDAG 71
LRV P+GGLGEIG N M V YD R +++D G
Sbjct: 19 LRVTPLGGLGEIGRN-MTVFEYDGRLLIVDCG 49
>gi|23014037|ref|ZP_00053877.1| COG0595: Predicted hydrolase of the metallo-beta-lactamase
superfamily [Magnetospirillum magnetotacticum MS-1]
Length = 549
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L LP+GG+GEIGMN + G +++++D G
Sbjct: 6 LTFLPLGGVGEIGMNLAVYGYGGKWLIVDCG 36
>gi|260436319|ref|ZP_05790289.1| ribonuclease J [Synechococcus sp. WH 8109]
gi|260414193|gb|EEX07489.1| ribonuclease J [Synechococcus sp. WH 8109]
Length = 681
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
P LRV+P+GGL EIG N + D +L+DAG
Sbjct: 13 PCLRVIPLGGLHEIGKNTCVFEYGDDLMLVDAG 45
>gi|332708813|ref|ZP_08428784.1| hypothetical protein LYNGBM3L_32480 [Moorea producens 3L]
gi|332352355|gb|EGJ31924.1| hypothetical protein LYNGBM3L_32480 [Moorea producens 3L]
Length = 586
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
++ P L+++P+GGL EIG N + D +L+DAG
Sbjct: 5 TSKPALKIIPLGGLHEIGKNTCVFEFNDEILLLDAG 40
>gi|384263118|ref|YP_005418306.1| Metallo-beta-lactamase [Rhodospirillum photometricum DSM 122]
gi|378404220|emb|CCG09336.1| Metallo-beta-lactamase [Rhodospirillum photometricum DSM 122]
Length = 560
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L +P+GG GEIGMN L G R++++D G
Sbjct: 17 LYFVPLGGAGEIGMNLSLYGYRGRWLMVDLG 47
>gi|406574323|ref|ZP_11050056.1| RNA-metabolising metallo-beta-lactamase [Janibacter hoylei
PVAS-1]
gi|404556223|gb|EKA61692.1| RNA-metabolising metallo-beta-lactamase [Janibacter hoylei
PVAS-1]
Length = 741
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LRV+P+GGLGE+G N ++ + + ++ID G
Sbjct: 19 LRVIPLGGLGEVGRNMAVIEHDGQLLIIDCG 49
>gi|238926973|ref|ZP_04658733.1| metallo-beta lactamase superfamily hydrolase [Selenomonas
flueggei ATCC 43531]
gi|304436515|ref|ZP_07396489.1| metallo-beta-lactamase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|238885207|gb|EEQ48845.1| metallo-beta lactamase superfamily hydrolase [Selenomonas
flueggei ATCC 43531]
gi|304370561|gb|EFM24212.1| metallo-beta-lactamase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 567
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 34 EGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
G G ++V+P+GGLGEIG N ++ D +++D+G
Sbjct: 14 HGKGGQKVQVIPLGGLGEIGKNMTVIRVDDEILVVDSG 51
>gi|396080174|dbj|BAM33550.1| putative metallo-beta-lactamase family protein [Helicobacter
cinaedi ATCC BAA-847]
Length = 712
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R+ P+GGLGEIG N ++ D I+ID G
Sbjct: 167 VRITPLGGLGEIGGNITVIETQDSAIVIDVG 197
>gi|240145914|ref|ZP_04744515.1| metallo-beta-lactamase family protein [Roseburia intestinalis
L1-82]
gi|257201979|gb|EEV00264.1| metallo-beta-lactamase family protein [Roseburia intestinalis
L1-82]
gi|291535172|emb|CBL08284.1| conserved hypothetical protein [Roseburia intestinalis M50/1]
gi|291539700|emb|CBL12811.1| conserved hypothetical protein [Roseburia intestinalis XB6B4]
Length = 584
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 2 RESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGN 61
+E+ + + + + E P + SV+ ++ L+++P+GGL +IGMN
Sbjct: 5 KEAGISQNDSKKAERPERKKRTSVKENKKE-----KTSKLKIIPLGGLEQIGMNITAFEY 59
Query: 62 YDRYILIDAG 71
D I++D G
Sbjct: 60 EDSIIVVDCG 69
>gi|386762684|ref|YP_006236320.1| metallo-beta-lactamase family protein [Helicobacter cinaedi
PAGU611]
gi|385147701|dbj|BAM13209.1| putative metallo-beta-lactamase family protein [Helicobacter
cinaedi PAGU611]
Length = 712
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+R+ P+GGLGEIG N ++ D I+ID G
Sbjct: 167 VRITPLGGLGEIGGNITVIETQDSAIVIDVG 197
>gi|427390271|ref|ZP_18884677.1| hypothetical protein HMPREF9233_00180 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425733286|gb|EKU96092.1| hypothetical protein HMPREF9233_00180 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 557
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 34 EGSNGPP----LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
E SN P +R++P+GGLGE+G NC ++ + ++ D G
Sbjct: 4 ENSNLPAAKDAVRIVPLGGLGEVGRNCNVIEYKGKLVVADCG 45
>gi|186701651|ref|ZP_02971353.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum
serovar 6 str. ATCC 27818]
gi|186700893|gb|EDU19175.1| metallo-beta-lactamase superfamily protein [Ureaplasma parvum
serovar 6 str. ATCC 27818]
Length = 596
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 34 EGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGD-------PGFGFQYTNICIFI 86
E + P V +GGL EIG N +V + D ILIDAG PGF N I
Sbjct: 2 ENNKKSPTYVYALGGLEEIGKNTYVVEHEDEIILIDAGIKFANASLPGFDGTVANFDYLI 61
Query: 87 YN 88
N
Sbjct: 62 KN 63
>gi|119716543|ref|YP_923508.1| beta-lactamase domain-containing protein [Nocardioides sp. JS614]
gi|119537204|gb|ABL81821.1| beta-lactamase domain protein [Nocardioides sp. JS614]
Length = 561
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYD-RYILIDAG 71
LRV+P+GGLGE+G N M YD R +L+D G
Sbjct: 19 LRVIPLGGLGEVGRN-MTAFEYDGRLLLVDCG 49
>gi|373494885|ref|ZP_09585482.1| hypothetical protein HMPREF0380_01120 [Eubacterium infirmum F0142]
gi|371967247|gb|EHO84719.1| hypothetical protein HMPREF0380_01120 [Eubacterium infirmum F0142]
Length = 667
Score = 35.4 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 2 RESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGN 61
R +K + +T+ P + + + + S L+++PIGGL EIG N ++
Sbjct: 82 RSNKPAVKPLSKTKKPSVNAVSKSNKTVNTKSKKSTNDVLKIIPIGGLNEIGKNMTVLEY 141
Query: 62 YDRYILIDAG 71
D+ ++ID G
Sbjct: 142 RDQILIIDCG 151
>gi|392383807|ref|YP_005033003.1| metallo-beta-lactamase [Azospirillum brasilense Sp245]
gi|356880522|emb|CCD01484.1| metallo-beta-lactamase [Azospirillum brasilense Sp245]
Length = 503
Score = 35.4 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 44 LPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGFQYTNICIFIYNGEFNIQQIDE 98
+P+GG IGMN L G+ +++++DAG G + I + + F +++DE
Sbjct: 46 IPLGGCSRIGMNMALYGHAGKWLIVDAGVAFMGDEAPGIDSLMADPSFIEERMDE 100
>gi|402574012|ref|YP_006623355.1| hypothetical protein Desmer_3648 [Desulfosporosinus meridiei DSM
13257]
gi|402255209|gb|AFQ45484.1| hypothetical protein Desmer_3648 [Desulfosporosinus meridiei DSM
13257]
Length = 554
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L+++P+GGLGEIG N ++ ++ +L+DAG
Sbjct: 7 LQIIPLGGLGEIGKNMTVIRYDNQMVLVDAG 37
>gi|124026825|ref|YP_001015940.1| metallo-beta-lactamase superfamily hydrolase [Prochlorococcus
marinus str. NATL1A]
gi|123961893|gb|ABM76676.1| Predicted hydrolase of the metallo-beta-lactamase superfamily
[Prochlorococcus marinus str. NATL1A]
Length = 649
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 36 SNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
+ P LR++P+GGLGEIG N + + +++DAG
Sbjct: 16 TKSPCLRIIPLGGLGEIGKNTCVFEYGNDIMILDAG 51
>gi|407768996|ref|ZP_11116373.1| metallo-beta-lactamase superfamily hydrolase [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407287916|gb|EKF13395.1| metallo-beta-lactamase superfamily hydrolase [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 558
Score = 35.0 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
L +P+GG GEIGMN L G D+++++D G
Sbjct: 10 LLFVPLGGSGEIGMNLNLYGYDDQWLMVDMG 40
>gi|254393058|ref|ZP_05008219.1| hydrolase of the metallo-beta-lactamase superfamily [Streptomyces
clavuligerus ATCC 27064]
gi|326443816|ref|ZP_08218550.1| metallo-beta-lactamase family hydrolase [Streptomyces
clavuligerus ATCC 27064]
gi|197706706|gb|EDY52518.1| hydrolase of the metallo-beta-lactamase superfamily [Streptomyces
clavuligerus ATCC 27064]
Length = 561
Score = 35.0 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYD-RYILIDAG 71
LRV P+GGLGEIG N M V YD R +++D G
Sbjct: 19 LRVTPLGGLGEIGRN-MTVFEYDGRLLIVDCG 49
>gi|421076002|ref|ZP_15537004.1| Ribocuclease J [Pelosinus fermentans JBW45]
gi|392525861|gb|EIW48985.1| Ribocuclease J [Pelosinus fermentans JBW45]
Length = 554
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
++++P+GGLGEIG N +V D I+IDAG
Sbjct: 8 IQIIPLGGLGEIGKNMTVVRYGDDIIVIDAG 38
>gi|358458897|ref|ZP_09169102.1| beta-lactamase domain protein [Frankia sp. CN3]
gi|357077859|gb|EHI87313.1| beta-lactamase domain protein [Frankia sp. CN3]
Length = 561
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LR++P+GGLGEIG N + + R +++D G
Sbjct: 19 LRIIPLGGLGEIGRNMTVFEHDGRLLIVDCG 49
>gi|294815465|ref|ZP_06774108.1| metallo-beta-lactamase family hydrolase [Streptomyces
clavuligerus ATCC 27064]
gi|294328064|gb|EFG09707.1| metallo-beta-lactamase family hydrolase [Streptomyces
clavuligerus ATCC 27064]
Length = 580
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYD-RYILIDAG 71
LRV P+GGLGEIG N M V YD R +++D G
Sbjct: 38 LRVTPLGGLGEIGRN-MTVFEYDGRLLIVDCG 68
>gi|406918489|gb|EKD57039.1| hypothetical protein ACD_58C00017G0005 [uncultured bacterium]
Length = 595
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 2 RESKVPRRRTGRTEGPRKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGN 61
R+ + R+ G S + S R+ Q + L+++P+GG GEIG N M+
Sbjct: 11 RDYRSDNRKDSNNNGQNHSSQQS-SRQAGQDFNLPKTKTLKIIPLGGQGEIGKNMMVYEY 69
Query: 62 YDRYILIDAG 71
D I++D G
Sbjct: 70 GDDIIVVDMG 79
>gi|392960708|ref|ZP_10326173.1| Ribocuclease J [Pelosinus fermentans DSM 17108]
gi|421054534|ref|ZP_15517502.1| Ribocuclease J [Pelosinus fermentans B4]
gi|421057787|ref|ZP_15520553.1| Ribocuclease J [Pelosinus fermentans B3]
gi|421065823|ref|ZP_15527515.1| Ribocuclease J [Pelosinus fermentans A12]
gi|421071396|ref|ZP_15532516.1| Ribocuclease J [Pelosinus fermentans A11]
gi|392440892|gb|EIW18552.1| Ribocuclease J [Pelosinus fermentans B4]
gi|392447312|gb|EIW24566.1| Ribocuclease J [Pelosinus fermentans A11]
gi|392454605|gb|EIW31427.1| Ribocuclease J [Pelosinus fermentans DSM 17108]
gi|392458027|gb|EIW34618.1| Ribocuclease J [Pelosinus fermentans A12]
gi|392462128|gb|EIW38244.1| Ribocuclease J [Pelosinus fermentans B3]
Length = 554
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
++++P+GGLGEIG N +V D I+IDAG
Sbjct: 8 IQIIPLGGLGEIGKNMTVVRYGDDIIVIDAG 38
>gi|427405804|ref|ZP_18896009.1| hypothetical protein HMPREF9161_00369 [Selenomonas sp. F0473]
gi|425708645|gb|EKU71684.1| hypothetical protein HMPREF9161_00369 [Selenomonas sp. F0473]
Length = 562
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 34 EGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
G N ++++P+GGLGEIG N + D I+ID+G
Sbjct: 9 HGKNVQKVQIIPLGGLGEIGKNMTAIRVDDEIIVIDSG 46
>gi|403713489|ref|ZP_10939589.1| hypothetical protein KILIM_004_00620 [Kineosphaera limosa NBRC
100340]
gi|403212253|dbj|GAB94272.1| hypothetical protein KILIM_004_00620 [Kineosphaera limosa NBRC
100340]
Length = 561
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
Query: 34 EGSNGPPL-----RVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
E + PPL R++P+GGLGE+G N ++ + + ++ID G
Sbjct: 7 ELTEPPPLQPGAVRIVPLGGLGEVGRNMTVIEHEGKLLIIDCG 49
>gi|315924758|ref|ZP_07920975.1| metallo-beta-lactamase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621657|gb|EFV01621.1| metallo-beta-lactamase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 599
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LR++P+GGLGEIG N D I++D G
Sbjct: 54 LRIIPVGGLGEIGKNMTAFQYGDEIIIVDCG 84
>gi|257870007|ref|ZP_05649660.1| metallo-beta-lactamase superfamily protein [Enterococcus
gallinarum EG2]
gi|357050266|ref|ZP_09111470.1| ribonuclease J 1 [Enterococcus saccharolyticus 30_1]
gi|257804171|gb|EEV32993.1| metallo-beta-lactamase superfamily protein [Enterococcus
gallinarum EG2]
gi|355381753|gb|EHG28869.1| ribonuclease J 1 [Enterococcus saccharolyticus 30_1]
Length = 559
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 19/29 (65%)
Query: 43 VLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
V +GGLGEIG NC V D ILIDAG
Sbjct: 12 VFGVGGLGEIGKNCYGVQFQDEIILIDAG 40
>gi|404495223|ref|YP_006719329.1| metal-dependent hydrolase [Geobacter metallireducens GS-15]
gi|418065690|ref|ZP_12703061.1| RNA-metabolising metallo-beta-lactamase [Geobacter
metallireducens RCH3]
gi|78192842|gb|ABB30609.1| metal-dependent hydrolase, beta-lactamase superfamily [Geobacter
metallireducens GS-15]
gi|373561770|gb|EHP87996.1| RNA-metabolising metallo-beta-lactamase [Geobacter
metallireducens RCH3]
Length = 558
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAG 71
LRV+P+GG+GEIG+N M+ D I+ D G
Sbjct: 11 LRVIPLGGVGEIGLNMMVYEYGDDIIVADCG 41
>gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
Length = 342
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 41 LRVLPIGGLGEIGMNCM--LVGNYDRYILIDAGDPGFGFQYTNICIFIYNGEF-NIQQID 97
++VL GG G IG N + +V Y Y +I N+ Y G N+++++
Sbjct: 3 MKVLITGGAGFIGSNFVNYMVQKYPSYQII------------NLDALTYAGNLENVKEVE 50
Query: 98 ESP----LDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSNG-FISLGKENL 152
P + G + DRE +E L EG+ V+ SH+ +R + G FI +
Sbjct: 51 NEPNYRFVKGDITDRELIESLFAEGIDAVVN---FAAESHV-DRSIADPGIFIKTNVQGT 106
Query: 153 QVIL 156
QV+L
Sbjct: 107 QVLL 110
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.142 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,568,201,510
Number of Sequences: 23463169
Number of extensions: 114976844
Number of successful extensions: 248604
Number of sequences better than 100.0: 498
Number of HSP's better than 100.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 247812
Number of HSP's gapped (non-prelim): 892
length of query: 156
length of database: 8,064,228,071
effective HSP length: 118
effective length of query: 38
effective length of database: 9,590,541,425
effective search space: 364440574150
effective search space used: 364440574150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)