Query 039213
Match_columns 156
No_of_seqs 142 out of 1193
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 12:19:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zq4_A Ribonuclease J 1, RNAse 99.7 1.1E-16 3.8E-21 144.1 10.6 105 38-142 6-141 (555)
2 3bk2_A RNAse J, metal dependen 99.6 7.4E-16 2.5E-20 138.4 11.1 108 35-142 11-156 (562)
3 2az4_A Hypothetical protein EF 99.6 1.2E-15 4.2E-20 130.6 11.1 104 38-141 4-165 (429)
4 3iek_A Ribonuclease TTHA0252; 99.6 4.7E-15 1.6E-19 129.0 9.2 100 41-140 1-138 (431)
5 2ycb_A Beta-CAsp RNAse, cleava 99.5 1.8E-14 6.3E-19 131.0 10.6 120 20-140 160-326 (636)
6 2xr1_A Cleavage and polyadenyl 99.5 2.2E-14 7.5E-19 130.9 10.3 120 20-140 164-329 (640)
7 3af5_A Putative uncharacterize 99.5 4E-14 1.4E-18 129.2 8.9 120 20-140 169-341 (651)
8 2i7t_A Cleavage and polyadenyl 99.5 8.2E-14 2.8E-18 121.0 9.8 104 37-140 8-155 (459)
9 2i7x_A Protein CFT2; polyadeny 99.3 1E-12 3.6E-17 121.8 7.6 96 45-140 6-155 (717)
10 2cbn_A Ribonuclease Z; phospho 99.3 3.2E-12 1.1E-16 103.5 8.8 101 40-140 1-139 (306)
11 1y44_A Ribonuclease Z; zinc-de 99.3 1.1E-11 3.8E-16 101.4 11.0 100 41-140 1-137 (320)
12 2xf4_A Hydroxyacylglutathione 99.3 2.7E-12 9.1E-17 98.8 6.6 100 40-142 2-130 (210)
13 3kl7_A Putative metal-dependen 99.3 7E-12 2.4E-16 100.5 7.8 94 30-140 19-128 (235)
14 1zkp_A Hypothetical protein BA 99.3 1.9E-11 6.4E-16 97.7 10.1 102 37-141 21-156 (268)
15 3m8t_A 'BLR6230 protein; subcl 99.3 1.4E-11 4.8E-16 98.8 9.1 98 43-143 47-176 (294)
16 3tp9_A Beta-lactamase and rhod 99.3 5E-12 1.7E-16 110.0 6.7 95 41-142 6-121 (474)
17 3l6n_A Metallo-beta-lactamase; 99.3 1.1E-11 3.6E-16 95.8 7.7 86 50-140 27-134 (219)
18 1k07_A FEZ-1 beta-lactamase; m 99.2 1.7E-11 5.7E-16 97.8 8.0 97 43-142 17-147 (263)
19 4ax1_B Metallo-beta-lactamase 99.2 3.2E-11 1.1E-15 96.7 8.1 94 50-143 54-181 (303)
20 3adr_A Putative uncharacterize 99.2 8.5E-11 2.9E-15 92.7 10.1 105 39-143 4-147 (261)
21 4efz_A Metallo-beta-lactamase 99.2 3.9E-11 1.3E-15 98.3 8.0 100 41-143 7-146 (298)
22 2zwr_A Metallo-beta-lactamase 99.2 3.1E-11 1.1E-15 93.3 6.6 87 41-130 3-115 (207)
23 4hl2_A Beta-lactamase NDM-1; s 99.2 3.4E-12 1.2E-16 100.7 0.2 93 44-136 38-155 (243)
24 3g1p_A Protein PHNP; C-P lyase 99.1 9.8E-11 3.4E-15 93.8 7.6 86 53-140 38-140 (258)
25 4eyb_A Beta-lactamase NDM-1; m 99.1 9.9E-12 3.4E-16 100.8 0.2 62 45-106 66-149 (270)
26 3md7_A Beta-lactamase-like; ss 99.1 2.4E-10 8.3E-15 93.4 8.3 104 37-140 25-188 (293)
27 1m2x_A Class B carbapenemase B 99.1 2E-10 7E-15 89.4 7.5 86 50-140 23-130 (223)
28 2fhx_A SPM-1; metallo-beta-lac 99.1 1.6E-10 5.5E-15 90.6 6.7 95 46-140 22-160 (246)
29 1sml_A Protein (penicillinase) 99.1 1.5E-10 5.1E-15 92.5 6.4 90 52-141 36-157 (269)
30 3r2u_A Metallo-beta-lactamase 99.1 9.2E-11 3.2E-15 102.7 5.6 94 41-142 27-141 (466)
31 1xm8_A Glyoxalase II; structur 99.1 1.5E-10 5E-15 93.9 6.2 81 52-143 9-111 (254)
32 3hnn_A Putative diflavin flavo 99.1 1.7E-10 5.8E-15 92.8 6.4 90 52-146 41-156 (262)
33 2zo4_A Metallo-beta-lactamase 99.0 5.2E-10 1.8E-14 90.9 8.4 91 53-143 21-170 (317)
34 2vw8_A PA1000, PQSE; quinolone 99.0 6E-10 2.1E-14 90.6 8.6 93 51-143 21-160 (303)
35 1a7t_A Metallo-beta-lactamase; 99.0 2E-10 6.7E-15 90.2 5.4 86 50-140 33-140 (232)
36 3q6v_A Beta-lactamase; metallo 99.0 2.3E-10 7.9E-15 88.6 5.3 96 44-139 16-146 (233)
37 3dha_A N-acyl homoserine lacto 99.0 3.1E-10 1E-14 89.6 5.6 88 50-137 35-168 (254)
38 2qed_A Hydroxyacylglutathione 99.0 4.9E-10 1.7E-14 91.0 6.9 88 40-142 7-115 (258)
39 4ad9_A Lactb2, beta-lactamase- 99.0 3.4E-10 1.2E-14 91.5 5.7 89 51-143 29-145 (289)
40 1qh5_A Glyoxalase II, protein 99.0 6.5E-10 2.2E-14 90.5 6.6 84 41-142 3-108 (260)
41 3zwf_A Zinc phosphodiesterase 99.0 2.5E-09 8.6E-14 91.2 10.0 66 41-106 1-101 (368)
42 4dik_A Flavoprotein; TM0755, e 99.0 1.1E-09 3.9E-14 95.4 7.8 89 53-146 51-164 (410)
43 1e5d_A Rubredoxin\:oxygen oxid 99.0 5.1E-10 1.8E-14 93.8 5.2 86 52-142 33-143 (402)
44 1mqo_A Beta-lactamase II; alph 98.9 4.7E-10 1.6E-14 87.5 4.1 84 51-139 38-143 (227)
45 2r2d_A AGR_PTI_140P, Zn-depend 98.9 3E-09 1E-13 84.6 8.7 88 52-139 41-187 (276)
46 2gcu_A Putative hydroxyacylglu 98.9 1.2E-09 4.2E-14 87.9 6.5 80 50-142 11-115 (245)
47 3rpc_A Possible metal-dependen 98.9 7.8E-09 2.7E-13 83.2 9.4 88 39-140 3-129 (264)
48 2ohh_A Type A flavoprotein FPR 98.9 4.5E-09 1.5E-13 88.1 8.1 87 53-142 34-148 (404)
49 3iog_A Beta-lactamase; hydrola 98.9 1.7E-09 5.7E-14 83.4 4.5 57 50-106 19-97 (227)
50 1ycg_A Nitric oxide reductase; 98.8 3.1E-09 1E-13 88.9 6.1 86 52-142 34-144 (398)
51 2p18_A Glyoxalase II; metallop 98.8 8.2E-09 2.8E-13 86.1 8.2 88 39-141 27-152 (311)
52 2q9u_A A-type flavoprotein; fl 98.8 2.7E-09 9.4E-14 90.2 4.7 86 52-142 39-149 (414)
53 2e7y_A TRNAse Z; tRNA maturati 98.8 3.3E-09 1.1E-13 84.2 4.8 94 40-140 2-131 (280)
54 2wyl_A L-ascorbate-6-phosphate 98.8 2.8E-08 9.7E-13 83.7 10.7 95 37-141 34-182 (360)
55 3esh_A Protein similar to meta 98.8 1.9E-09 6.6E-14 86.9 2.9 56 51-106 45-141 (280)
56 3bv6_A Metal-dependent hydrola 98.8 4.4E-08 1.5E-12 83.5 11.0 94 38-141 59-206 (379)
57 1jjt_A IMP-1 metallo beta-lact 98.7 5.9E-09 2E-13 81.6 4.0 86 48-139 27-133 (228)
58 3aj3_A MLR6805 protein, 4-pyri 98.7 5E-09 1.7E-13 83.5 3.4 56 51-106 32-123 (274)
59 2y8b_A Metallo-B-lactamase; hy 98.7 8.3E-09 2.8E-13 83.1 4.8 87 50-137 64-172 (265)
60 3jxp_A Coenzyme PQQ synthesis 98.7 1.5E-08 5.3E-13 85.1 6.2 89 53-141 40-163 (321)
61 1p9e_A Methyl parathion hydrol 98.7 1.6E-08 5.4E-13 84.4 5.0 54 53-106 96-179 (331)
62 2bib_A CBPE, teichoic acid pho 98.7 2.1E-08 7.2E-13 88.6 6.0 98 40-140 7-165 (547)
63 2cfu_A SDSA1; SDS-hydrolase, l 98.5 9.5E-08 3.3E-12 87.6 5.7 91 53-143 122-278 (658)
64 1ztc_A Hypothetical protein TM 98.5 9.1E-08 3.1E-12 74.8 4.3 50 52-101 33-103 (221)
65 4b87_A DNA cross-LINK repair 1 98.3 2E-07 6.9E-12 80.0 3.2 94 40-140 11-117 (367)
66 2p4z_A Metal-dependent hydrola 98.3 5.7E-07 1.9E-11 73.5 4.2 52 53-104 32-105 (284)
67 2yhe_A SEC-alkyl sulfatase; hy 97.5 2.1E-07 7.3E-12 85.9 0.0 94 53-146 132-292 (668)
68 1vjn_A Zn-dependent hydrolase 98.2 1.5E-06 5.3E-11 68.9 4.4 43 52-94 18-64 (220)
69 3zdk_A 5' exonuclease apollo; 98.0 7.8E-06 2.7E-10 69.4 5.9 54 83-140 27-97 (336)
70 2p97_A Hypothetical protein; p 98.0 1.2E-06 4E-11 67.5 0.6 54 50-106 20-92 (201)
71 3h3e_A Uncharacterized protein 97.6 2.1E-05 7.1E-10 65.2 2.5 46 53-103 31-93 (267)
72 4h4n_A Hypothetical protein BA 46.3 7.8 0.00027 25.5 1.3 33 28-60 6-38 (67)
73 1eiw_A Hypothetical protein MT 24.5 22 0.00074 25.4 0.7 10 83-92 6-15 (111)
74 3va4_A Mediator of DNA damage 22.0 75 0.0026 22.8 3.3 22 119-140 104-125 (132)
75 2ezd_A High mobility group pro 21.0 55 0.0019 17.9 1.8 17 3-19 3-21 (26)
No 1
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.68 E-value=1.1e-16 Score=144.13 Aligned_cols=105 Identities=23% Similarity=0.287 Sum_probs=83.9
Q ss_pred CCCeEEEEccccCcccceEEEEEeCCeEEEEecCCC--CCC-C--------------CcCee-EEEcccCccc-cc----
Q 039213 38 GPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDP--GFG-F--------------QYTNI-CIFIYNGEFN-IQ---- 94 (156)
Q Consensus 38 ~~~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~--~~~-i--------------~~~~~-aI~LTHgH~D-IG---- 94 (156)
.++|++++|||++|+|+|||+++.++.++|||||.. ... . ....+ +|||||+|.| +|
T Consensus 6 ~~~i~i~~lGg~~eiG~n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~ 85 (555)
T 3zq4_A 6 NDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPY 85 (555)
T ss_dssp CCSEEEEEEESBSSSSCCEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHH
T ss_pred CCcEEEEEcCCCCccCCEEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHH
Confidence 458999999999999999999999999999999973 211 1 01112 9999999999 88
Q ss_pred -------ccccCcchHHHH-HHHhhhhhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 95 -------QIDESPLDGKVF-DREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 95 -------pVY~t~~t~~ll-~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
|||+++.+.+++ .+............+.+++|+.+++|+++++++...
T Consensus 86 l~~~~~~pIy~t~~t~~ll~~~l~~~~~~~~~~~~~v~~g~~~~ig~~~v~~~~~~ 141 (555)
T 3zq4_A 86 LLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLNIIGEDDIVKFRKTAVSFFRTT 141 (555)
T ss_dssp HHTTCCCCEEECHHHHHHHHHHHHHHSTTTTCCEEECCTTCCEEETTEEEEEEEEB
T ss_pred HHHhcCceEEECHHHHHHHHHHHHHcCccCCCceEEeCCCCEEEECCEEEEEEeCC
Confidence 899999999999 444333332334568899999999999999998754
No 2
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.64 E-value=7.4e-16 Score=138.37 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=82.7
Q ss_pred CCCCCCeEEEEccccCcccceEEEEEeCCeEEEEecCCCCC--C----------C-----CcCee-EEEcccCccc-cc-
Q 039213 35 GSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGF--G----------F-----QYTNI-CIFIYNGEFN-IQ- 94 (156)
Q Consensus 35 ~~~~~~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~--~----------i-----~~~~~-aI~LTHgH~D-IG- 94 (156)
.....+|++++|||++++|+|||+|+.++..+|||||.... . + ....+ +|||||+|.| +|
T Consensus 11 ~~~~~~~~i~~LGg~~eig~n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHigg 90 (562)
T 3bk2_A 11 GGPQDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGG 90 (562)
T ss_dssp ---CCCEEEEEEESBSBSSCCEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTT
T ss_pred CCCCCcEEEEEecCCCCcCCCEEEEEECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCC
Confidence 33566899999999999999999999999999999997311 1 1 11122 9999999999 87
Q ss_pred ---------------ccccCcchHHHH-HHHhhhhhcc-cceEEEecCCCeEEeec-eEEeeeeec
Q 039213 95 ---------------QIDESPLDGKVF-DREALEELSK-EGVTLVIKNGEMLGVSH-LRNRRVLSN 142 (156)
Q Consensus 95 ---------------pVY~t~~t~~ll-~~~~~~~~~~-~~~~~~l~~Gd~i~ig~-~~v~~~~~~ 142 (156)
|||+++.+.+++ .+.....+.. ....+.+++|+.+++|+ ++++++...
T Consensus 91 l~~L~~~~~~~~~~~pIy~~~~t~~~l~~~l~~~~~~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~ 156 (562)
T 3bk2_A 91 LPFLLPMIFGKESPVPIYGARLTLGLLRGKLEEFGLRPGAFNLKEISPDDRIQVGRYFTLDLFRMT 156 (562)
T ss_dssp HHHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHHTTCCSTTSEEEEECTTCEEEETTTEEEEEEECC
T ss_pred HHHHHHhhccccCCceEEeCHHHHHHHHHHHHHcCCCcCCceEEEECCCCEEEeCCCEEEEEEECC
Confidence 589999999998 4333333332 34567899999999999 999998743
No 3
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.63 E-value=1.2e-15 Score=130.60 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=79.5
Q ss_pred CCCeEEEEccccCcccceEEEEEeCCeEEEEecCCCCCC--------------------C-----------------CcC
Q 039213 38 GPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFG--------------------F-----------------QYT 80 (156)
Q Consensus 38 ~~~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~--------------------i-----------------~~~ 80 (156)
..+|++.+|||.|++|+|||+|+.++..+|||||..... + ...
T Consensus 4 ~~~m~i~~lG~~~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~ 83 (429)
T 2az4_A 4 KAKTTVTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDY 83 (429)
T ss_dssp -CCEEEEEEECTTSSSCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCC
T ss_pred CCceEEEEeeCCCccCCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhccc
Confidence 447999999999999999999999999999999975310 0 111
Q ss_pred ee-EEEcccCccc-cc---------ccccCcchHHHHHHHhhhh--h--------cccceEEEecCCCeEEeeceEEeee
Q 039213 81 NI-CIFIYNGEFN-IQ---------QIDESPLDGKVFDREALEE--L--------SKEGVTLVIKNGEMLGVSHLRNRRV 139 (156)
Q Consensus 81 ~~-aI~LTHgH~D-IG---------pVY~t~~t~~ll~~~~~~~--~--------~~~~~~~~l~~Gd~i~ig~~~v~~~ 139 (156)
.+ +|||||+|.| +| |||+++.+.+++....... + ......+.+++|+.+++|+++++++
T Consensus 84 ~i~~v~lTH~H~DHiggl~~l~~~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~ 163 (429)
T 2az4_A 84 QHTAVFLSHAHLDHSRMINYLDPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISVEIV 163 (429)
T ss_dssp SEEEEECSCSCHHHHTTGGGBCTTSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEEEEEE
T ss_pred cCCEEEECCchHHHhCcHhHhcCCCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEECCEEEEEE
Confidence 22 9999999999 87 7999999999983211111 0 0123457899999999999999988
Q ss_pred ee
Q 039213 140 LS 141 (156)
Q Consensus 140 ~~ 141 (156)
..
T Consensus 164 ~~ 165 (429)
T 2az4_A 164 PV 165 (429)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 4
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.57 E-value=4.7e-15 Score=128.96 Aligned_cols=100 Identities=15% Similarity=0.195 Sum_probs=77.9
Q ss_pred eEEEEccccCcccceEEEEEeCCeEEEEecCCCCCC--------C--CcCee-EEEcccCccc-cc------------cc
Q 039213 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFG--------F--QYTNI-CIFIYNGEFN-IQ------------QI 96 (156)
Q Consensus 41 i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~--------i--~~~~~-aI~LTHgH~D-IG------------pV 96 (156)
|++.+||+++++|+|||+|+.++..+|||||..... + ....+ +|||||+|.| +| ||
T Consensus 1 M~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~~~~~~I 80 (431)
T 3iek_A 1 MRIVPFGAAREVTGSAHLLLAGGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFREGYRGPV 80 (431)
T ss_dssp CEEEECSCSSSSSCCCEEEEETTEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHTTCCSCE
T ss_pred CEEEEeCCCCCCCCcEEEEEECCeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHcCCCCeE
Confidence 689999999999999999999999999999984322 1 11223 9999999999 88 89
Q ss_pred ccCcchHHHHH-HHh-hhhhcc------------cceEEEecCCCeEEeeceEEeeee
Q 039213 97 DESPLDGKVFD-REA-LEELSK------------EGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 97 Y~t~~t~~ll~-~~~-~~~~~~------------~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
|+|+.+.+++. ... ...+.. ......++.|+.+++++++++++.
T Consensus 81 y~t~~t~~l~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~ 138 (431)
T 3iek_A 81 YATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQ 138 (431)
T ss_dssp EECHHHHHHHHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEE
T ss_pred EEcHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEe
Confidence 99999999883 211 111111 024678999999999999999885
No 5
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.54 E-value=1.8e-14 Score=131.01 Aligned_cols=120 Identities=15% Similarity=0.269 Sum_probs=86.5
Q ss_pred cccHHHHhhhhcccCCCCCCCeEEEEccccCcccceEEEEEeCCeEEEEecCCCCCC---------C-----CcCee-EE
Q 039213 20 SMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFG---------F-----QYTNI-CI 84 (156)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~---------i-----~~~~~-aI 84 (156)
+++..+...+++.+.. ...+|++++||+.+++|.|||+|+.++..+|||||..... + ....+ +|
T Consensus 160 ~~l~~i~~~i~~~~~~-~~~~m~i~~LG~~~evg~s~~lI~~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~V 238 (636)
T 2ycb_A 160 KILQQLGNRIHQKPKY-DNDWARLTAMGGFREVGRSCLYLQTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAV 238 (636)
T ss_dssp HHHHHHHHHHTSCCSS-CCCCCEEEEEESSSSSSCCEEEEECSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEE
T ss_pred HHHHHhhhccccccCC-CCCeEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcccccchhhccccccccCCcccCcEE
Confidence 4444554445544433 4568999999999999999999999999999999986432 1 11122 99
Q ss_pred EcccCccc-cc------------ccccCcchHHHHH-HHh-h------hh--hcc--------cceEEEecCCCeEEe-e
Q 039213 85 FIYNGEFN-IQ------------QIDESPLDGKVFD-REA-L------EE--LSK--------EGVTLVIKNGEMLGV-S 132 (156)
Q Consensus 85 ~LTHgH~D-IG------------pVY~t~~t~~ll~-~~~-~------~~--~~~--------~~~~~~l~~Gd~i~i-g 132 (156)
||||+|.| +| |||+|+.+.+++. ... . .. ... ......++.|+.+++ +
T Consensus 239 lLTH~H~DHiGglp~L~~~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~g 318 (636)
T 2ycb_A 239 IITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAP 318 (636)
T ss_dssp ECSSSSHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEET
T ss_pred EECCCChHHhcCHHHHHhcCCCCeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecC
Confidence 99999999 87 8999999999872 211 0 00 000 013578999999999 8
Q ss_pred ceEEeeee
Q 039213 133 HLRNRRVL 140 (156)
Q Consensus 133 ~~~v~~~~ 140 (156)
++++++..
T Consensus 319 gi~v~~~~ 326 (636)
T 2ycb_A 319 DIRLTLHN 326 (636)
T ss_dssp TEEEEEEE
T ss_pred CeEEEEeC
Confidence 89998764
No 6
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.53 E-value=2.2e-14 Score=130.87 Aligned_cols=120 Identities=18% Similarity=0.244 Sum_probs=86.6
Q ss_pred cccHHHHhhhhcccCCCCCCCeEEEEccccCcccceEEEEEeCCeEEEEecCCCCCC----C---C---c---Cee-EEE
Q 039213 20 SMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFG----F---Q---Y---TNI-CIF 85 (156)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~----i---~---~---~~~-aI~ 85 (156)
+++..+...+++.... ...+|++.+||+.+++|.|||+|+.++..+|||||..... + . . ..+ +||
T Consensus 164 ~~l~~i~~~i~~~~~~-~~~~m~I~~LG~~~evg~s~~LI~~~~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~Vl 242 (640)
T 2xr1_A 164 EILKTVGRKIHRECTS-KDQWVRVTALGGCKEVGRSCFLLSTPESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVI 242 (640)
T ss_dssp HHHHHHHHHHTSCCCC-SCCCCEEEEEECSSSSBCCEEEEECSSCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEE
T ss_pred HHHHHHhhhccCcccC-CCCceEEEEEecCCCCCCcEEEEEECCeEEEEeCCCCccccccccccccccccCCcccCcEEE
Confidence 3444554455554433 5568999999999999999999999999999999986421 1 1 1 123 999
Q ss_pred cccCccc-cc------------ccccCcchHHHHH-HHh------h-hh--hcc--------cceEEEecCCCeEEe-ec
Q 039213 86 IYNGEFN-IQ------------QIDESPLDGKVFD-REA------L-EE--LSK--------EGVTLVIKNGEMLGV-SH 133 (156)
Q Consensus 86 LTHgH~D-IG------------pVY~t~~t~~ll~-~~~------~-~~--~~~--------~~~~~~l~~Gd~i~i-g~ 133 (156)
|||+|.| +| |||+|+.+.+++. ... + .. ... ......++.|+.+++ ++
T Consensus 243 lTH~H~DHiGgl~~L~~~~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg 322 (640)
T 2xr1_A 243 VTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPD 322 (640)
T ss_dssp CCSSCHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETT
T ss_pred ECCCChhhhccHHHHHhcCCCCeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCC
Confidence 9999999 87 8999999998872 211 0 00 000 013578999999999 88
Q ss_pred eEEeeee
Q 039213 134 LRNRRVL 140 (156)
Q Consensus 134 ~~v~~~~ 140 (156)
+++++..
T Consensus 323 ~~v~~~~ 329 (640)
T 2xr1_A 323 IKLTFHN 329 (640)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9998754
No 7
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.50 E-value=4e-14 Score=129.23 Aligned_cols=120 Identities=18% Similarity=0.260 Sum_probs=86.7
Q ss_pred cccHHHHhhhhcccCCCCCCCeEEEEccccCcccceEEEEEeCCeEEEEecCCCCCC----------CC---c------C
Q 039213 20 SMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFG----------FQ---Y------T 80 (156)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~----------i~---~------~ 80 (156)
.+..+++..+++.... ...+|++.+||+.+++|.|||+|+.++..+|||||..... +. . .
T Consensus 169 ~~l~~~~~~i~~~~~~-~~~~m~i~~LG~~~~vg~s~~LI~~~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~ 247 (651)
T 3af5_A 169 KFLRQVGRNIYRKPEY-KSRWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREG 247 (651)
T ss_dssp HHHHHHHHHHTSSSCC-CCSCEEEEEEECSSSSSCCEEEEEESSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTT
T ss_pred HHHHHhccceecCCcC-CCCceEEEEEecCCCCCCcEEEEEECCcEEEEeCCCChhccccchhhcccccchhhccCcccC
Confidence 3444455555554433 5668999999999999999999999999999999986321 11 1 2
Q ss_pred ee-EEEcccCccc-cc-------------ccccCcchHHHHH-HHh-h------hh--hcc--------cceEEEecCCC
Q 039213 81 NI-CIFIYNGEFN-IQ-------------QIDESPLDGKVFD-REA-L------EE--LSK--------EGVTLVIKNGE 127 (156)
Q Consensus 81 ~~-aI~LTHgH~D-IG-------------pVY~t~~t~~ll~-~~~-~------~~--~~~--------~~~~~~l~~Gd 127 (156)
.+ +|||||+|.| +| |||+|+.+++++. ... . .. ... ......++.|+
T Consensus 248 ~Id~VllTH~H~DHiGglp~L~~~~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 327 (651)
T 3af5_A 248 LLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGE 327 (651)
T ss_dssp CCCEEECSCSSHHHHTTHHHHHHTTCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTC
T ss_pred CCCEEEECCCChHhhcCHHHHHhcCCCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCC
Confidence 23 9999999999 87 7999999998872 211 0 00 000 01357899999
Q ss_pred eEEe-eceEEeeee
Q 039213 128 MLGV-SHLRNRRVL 140 (156)
Q Consensus 128 ~i~i-g~~~v~~~~ 140 (156)
.+++ +++++++..
T Consensus 328 ~~~l~ggi~v~~~~ 341 (651)
T 3af5_A 328 VRDISPDIRLTLHN 341 (651)
T ss_dssp CEEEETTEEEEEEE
T ss_pred EEEecCCEEEEEec
Confidence 9999 889998754
No 8
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.49 E-value=8.2e-14 Score=120.98 Aligned_cols=104 Identities=15% Similarity=0.176 Sum_probs=77.9
Q ss_pred CCCCeEEEEccccCcccceEEEEEeCCeEEEEecCCCCC----C-------CCcCee-EEEcccCccc-cc---------
Q 039213 37 NGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGF----G-------FQYTNI-CIFIYNGEFN-IQ--------- 94 (156)
Q Consensus 37 ~~~~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~----~-------i~~~~~-aI~LTHgH~D-IG--------- 94 (156)
...+|++.+||+.+++|.|||+|+.++..+|||||.... . +....+ +|||||+|.| +|
T Consensus 8 ~~~~m~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~ 87 (459)
T 2i7t_A 8 ESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKT 87 (459)
T ss_dssp -CEEEEEEEEESSSSSSSCEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHS
T ss_pred CCCeEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhc
Confidence 345799999999999999999999999999999998521 1 111123 9999999999 88
Q ss_pred ----ccccCcchHHHHH-HHhh----------------hhh-cccceEEEecCCCeEEeeceEEeeee
Q 039213 95 ----QIDESPLDGKVFD-REAL----------------EEL-SKEGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 95 ----pVY~t~~t~~ll~-~~~~----------------~~~-~~~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
|||+++.|.+++. .... ..+ ........++.|+.++++++++.++.
T Consensus 88 ~~~~~iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 155 (459)
T 2i7t_A 88 SFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYH 155 (459)
T ss_dssp SCCSEEEEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEE
T ss_pred CCCCCEEechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEe
Confidence 6999999988772 2110 001 00124578999999999999998864
No 9
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.35 E-value=1e-12 Score=121.83 Aligned_cols=96 Identities=11% Similarity=-0.041 Sum_probs=70.6
Q ss_pred EccccCcccceEEEEEeCCeEEEEecCCCCCCC-----------CcCee-EEEcccCccc-cc-----------------
Q 039213 45 PIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGF-----------QYTNI-CIFIYNGEFN-IQ----------------- 94 (156)
Q Consensus 45 ~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~i-----------~~~~~-aI~LTHgH~D-IG----------------- 94 (156)
.+||++++++|||+|+.++..||||||...... ..+.+ +|||||+|.| +|
T Consensus 6 L~gg~~ev~~n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~ 85 (717)
T 2i7x_A 6 NCCDDGSGTTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRI 85 (717)
T ss_dssp EECCSSSSSCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTC
T ss_pred EeecCCCCCCCEEEEEECCeEEEEeCCCCcccchhhhHHHHHHhcCCCCCEEEECCCChHHHCCHHHHHHhhhhcccCCc
Confidence 347789999999999999999999999875211 11233 9999999999 97
Q ss_pred ccccCcchHHHHH-HHhh----hhhc--------------c-cceEEEecCCCeEEe----eceEEeeee
Q 039213 95 QIDESPLDGKVFD-REAL----EELS--------------K-EGVTLVIKNGEMLGV----SHLRNRRVL 140 (156)
Q Consensus 95 pVY~t~~t~~ll~-~~~~----~~~~--------------~-~~~~~~l~~Gd~i~i----g~~~v~~~~ 140 (156)
|||+|+.|.+++. .... .... . ....+.++.|+.+++ +++++.++.
T Consensus 86 pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~ 155 (717)
T 2i7x_A 86 QVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYN 155 (717)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEE
T ss_pred eEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEEC
Confidence 5999999998762 1110 0000 0 013468899999999 899998874
No 10
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.33 E-value=3.2e-12 Score=103.55 Aligned_cols=101 Identities=14% Similarity=0.124 Sum_probs=74.2
Q ss_pred CeEEEEccccCcc-----cceEEEEEe----CCeEEEEecCCCCC------CCCcCee-EEEcccCccc-cc--------
Q 039213 40 PLRVLPIGGLGEI-----GMNCMLVGN----YDRYILIDAGDPGF------GFQYTNI-CIFIYNGEFN-IQ-------- 94 (156)
Q Consensus 40 ~i~~~~LGg~gei-----g~Ncy~v~~----~~~~iIID~G~~~~------~i~~~~~-aI~LTHgH~D-IG-------- 94 (156)
+|++.+||..+.+ +.|||+|+. ++..+|||||.... .+....+ +|||||+|.| ++
T Consensus 1 ~m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~G~~~~~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~ 80 (306)
T 2cbn_A 1 AMNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCS 80 (306)
T ss_dssp CCEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTHHHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHH
T ss_pred CeEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEECCHHHHHHHHHhCCCHHHcCEEEEecCCchhhCChHHHHHH
Confidence 4788999987776 569999998 88999999997421 1122233 9999999999 85
Q ss_pred ----------ccccCcchHHHHH-HHhhhh--hcccceEEEecCCCeEEeeceEEeeee
Q 039213 95 ----------QIDESPLDGKVFD-REALEE--LSKEGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 95 ----------pVY~t~~t~~ll~-~~~~~~--~~~~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
+||+++.+.+++. ...... ...+...+.+++|+.+++++++++++.
T Consensus 81 ~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 139 (306)
T 2cbn_A 81 RSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYP 139 (306)
T ss_dssp HHHTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECSSEEEEEEE
T ss_pred HHhcCCCCCeEEEcCccHHHHHHHHHHhhccCCCceEEEEEcCCCcEeecCCEEEEEEE
Confidence 4999999998883 221111 111224578899999999999998875
No 11
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.31 E-value=1.1e-11 Score=101.40 Aligned_cols=100 Identities=15% Similarity=0.106 Sum_probs=73.2
Q ss_pred eEEEEccccCcc-----cceEEEEEe---CCeEEEEecCCCCC------CCCcCee-EEEcccCccc-cc----------
Q 039213 41 LRVLPIGGLGEI-----GMNCMLVGN---YDRYILIDAGDPGF------GFQYTNI-CIFIYNGEFN-IQ---------- 94 (156)
Q Consensus 41 i~~~~LGg~gei-----g~Ncy~v~~---~~~~iIID~G~~~~------~i~~~~~-aI~LTHgH~D-IG---------- 94 (156)
|++.+||..+.+ +.|||+|+. ++..+|||||.... .+....+ +|||||+|.| ++
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~ 80 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRS 80 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTHHHHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHH
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCHHHHHHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHH
Confidence 578888877765 579999999 89999999997421 1222233 9999999999 85
Q ss_pred --------ccccCcchHHHH-HHHhhhh--hcccceEEEecCCCeEEeeceEEeeee
Q 039213 95 --------QIDESPLDGKVF-DREALEE--LSKEGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 95 --------pVY~t~~t~~ll-~~~~~~~--~~~~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
+||+++.+.+++ ....... ...+...+.+++|+.++++++++.++.
T Consensus 81 ~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~p 137 (320)
T 1y44_A 81 FQGGEDELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVS 137 (320)
T ss_dssp HTTCCSCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEECCSEEEEECSSEEEEEEE
T ss_pred hcCCCCCEEEEeCHHHHHHHHHHHHhhccCCCCceEEEEcCCCceEecCCEEEEEEE
Confidence 499999998888 3221111 111234578899999999999988875
No 12
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.31 E-value=2.7e-12 Score=98.84 Aligned_cols=100 Identities=14% Similarity=0.242 Sum_probs=70.6
Q ss_pred CeEEEEccccCcccceEEEEEe--CCeEEEEecCCCCCCC-------CcCeeEEEcccCccc-cc-----------cccc
Q 039213 40 PLRVLPIGGLGEIGMNCMLVGN--YDRYILIDAGDPGFGF-------QYTNICIFIYNGEFN-IQ-----------QIDE 98 (156)
Q Consensus 40 ~i~~~~LGg~geig~Ncy~v~~--~~~~iIID~G~~~~~i-------~~~~~aI~LTHgH~D-IG-----------pVY~ 98 (156)
+|+.+++|. ++.|||+|+. ++..+|||||.....+ ..+..+||+||+|.| +| +||+
T Consensus 2 ~i~~~~~~~---~~~n~~li~~~~~~~~iLiD~G~~~~~l~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~ 78 (210)
T 2xf4_A 2 NYRIIPVTA---FSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHYGVPVIG 78 (210)
T ss_dssp EEEEEEETT---TTEEEEEEECTTTCEEEEECCCSCHHHHHHHHHHHTCEEEEEECSCSCHHHHTTHHHHHHHHTCCEEC
T ss_pred eEEEEeeCC---cccEEEEEEecCCCcEEEEcCCCCHHHHHHHHHHcCCceeEEEECCCChhhhcCHHHHHHHcCCcEEE
Confidence 367788854 7899999985 5789999999642222 222239999999999 88 7999
Q ss_pred CcchHHHH-HHHh----hhhhc---ccceEEEecCCCeEEeeceEEeeeeec
Q 039213 99 SPLDGKVF-DREA----LEELS---KEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 99 t~~t~~ll-~~~~----~~~~~---~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
++.+.+.+ +... ....+ ....+..+++|+.+++|+.+++.+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~p 130 (210)
T 2xf4_A 79 PEKEDEFWLQGLPAQSRMFGLDECQPLTPDRWLNDGDRVSVGNVTLQVLHCP 130 (210)
T ss_dssp CCGGGHHHHHTHHHHHHHTTCCCCCCCCCSBCCCTTCEEEETTEEEEEEECC
T ss_pred ecchHHHHhccchhhhhhcCCcccCCCCCceEECCCCEEEECCeEEEEEECC
Confidence 99998877 3111 11111 111235788999999999988888643
No 13
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.28 E-value=7e-12 Score=100.49 Aligned_cols=94 Identities=16% Similarity=0.209 Sum_probs=71.8
Q ss_pred hcccCCCCCCCeEEEEccccCcccceEEEEEeCCeEEEEecCCCCCCC-CcCee-EEEcccCccc-cc------------
Q 039213 30 EQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGF-QYTNI-CIFIYNGEFN-IQ------------ 94 (156)
Q Consensus 30 ~~~~~~~~~~~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~i-~~~~~-aI~LTHgH~D-IG------------ 94 (156)
.+.+.......|++..+ |.|||+|+.++..+|||||.....+ ..+.+ +|||||+|.| ++
T Consensus 19 ~~~~~~~~~~~~~it~l------g~s~~li~~~~~~iliDpg~~~~~~~~~~~id~VliTH~H~DH~~~~~l~~~~~~~~ 92 (235)
T 3kl7_A 19 GDSFKTKSGKELTITFI------KHGSLMLTYDNHSIQVDPVSEYADYTTFPKADIILITHEHGDHLDPKAIQAVEKSDT 92 (235)
T ss_dssp EEEEECTTSCEEEEEEE------ETTEEEEEETTEEEEESCCTTTCCTTSSCCCSEEEECCSSTTTCCHHHHHHHCCTTC
T ss_pred HhhcCCCCCCCeEEEEE------cceEEEEEECCEEEEECCCCCccchhhCCCCCEEEECCCccccCCHHHHHHhhcCCC
Confidence 34444334567888888 6799999999999999999865443 22233 9999999999 88
Q ss_pred ccccCcchHHHHHHHhhhhhcccceEEEecCCC-eEEeeceEEeeee
Q 039213 95 QIDESPLDGKVFDREALEELSKEGVTLVIKNGE-MLGVSHLRNRRVL 140 (156)
Q Consensus 95 pVY~t~~t~~ll~~~~~~~~~~~~~~~~l~~Gd-~i~ig~~~v~~~~ 140 (156)
|||+++.+.+.+. ....+++|+ .+++|+++++.+.
T Consensus 93 ~v~~~~~~~~~l~-----------~~~~l~~g~~~~~~g~~~i~~~p 128 (235)
T 3kl7_A 93 EIIANENSQKKLG-----------KGKVLKNGDTDTSISYMKIEAVP 128 (235)
T ss_dssp EEEECHHHHHHHT-----------CSEECCTTCEECCSTTCEEEEEE
T ss_pred EEEEcHHHHHHhc-----------CcEEecCCCEEEEECCEEEEEEE
Confidence 6888877766651 135788999 9999999999883
No 14
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.28 E-value=1.9e-11 Score=97.75 Aligned_cols=102 Identities=12% Similarity=0.144 Sum_probs=74.4
Q ss_pred CCCCeEEEEccccCcc-----cceEEEEEeCCeEEEEecCCCC----CC-CCcCee-EEEcccCccc-cc----------
Q 039213 37 NGPPLRVLPIGGLGEI-----GMNCMLVGNYDRYILIDAGDPG----FG-FQYTNI-CIFIYNGEFN-IQ---------- 94 (156)
Q Consensus 37 ~~~~i~~~~LGg~gei-----g~Ncy~v~~~~~~iIID~G~~~----~~-i~~~~~-aI~LTHgH~D-IG---------- 94 (156)
....|++..||..+.+ +.|||+|+.++..+|||||... .. +....+ +|||||.|.| ++
T Consensus 21 ~~~~m~i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~~~~~~l~~~~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~ 100 (268)
T 1zkp_A 21 QSNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGVLAQLQKYITPSDIDAVVLSHYHHDHVADIGVLQYARL 100 (268)
T ss_dssp CSSCEEEEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCTTHHHHHTTTCCGGGCCEEECSCCCHHHHTTHHHHHHHHH
T ss_pred CCCCcEEEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCHHHHHHHHHhCCcccCCEEEEecCCchhhCCHHHHHHHHH
Confidence 4557999999876655 5899999999999999999742 11 222233 9999999999 86
Q ss_pred ------------ccccCcchHHHHHHHhhhhhcccceEEEecCCCeEEeeceEEeeeee
Q 039213 95 ------------QIDESPLDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLS 141 (156)
Q Consensus 95 ------------pVY~t~~t~~ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~ 141 (156)
+||+++.+.+++... ..........+++|+.+++|+++++++..
T Consensus 101 ~~~~~~~~~~~~~i~~~~~~~~~l~~~---~~~~~~~~~~~~~g~~~~~g~~~v~~~~~ 156 (268)
T 1zkp_A 101 ITSATKGQLPELPIYGHTFDENGFHSL---THEPHTKGIPYNPEETLQIGPFSISFLKT 156 (268)
T ss_dssp HHHHHHCCCCCEEEEECSSSHHHHHTT---CBTTTEEEEECCTTSCEEETTEEEEEEEC
T ss_pred hcccccCCCCceEEEeCccHHHHHHhc---ccCCccceEEecCCCeEEECCEEEEEEEC
Confidence 257777777766211 01122345788999999999999988764
No 15
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.27 E-value=1.4e-11 Score=98.83 Aligned_cols=98 Identities=14% Similarity=0.223 Sum_probs=71.3
Q ss_pred EEEccccCcccceEEEEEeCCeEEEEecCCCCC--CC-------CcC--ee-EEEcccCccc-cc-----------cccc
Q 039213 43 VLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGF--GF-------QYT--NI-CIFIYNGEFN-IQ-----------QIDE 98 (156)
Q Consensus 43 ~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~--~i-------~~~--~~-aI~LTHgH~D-IG-----------pVY~ 98 (156)
++.+| ..+.|||+|+.++..+|||||.+.. .+ .+. .+ +||+||+|.| +| +||+
T Consensus 47 v~~~~---~~~~n~~li~~~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~ 123 (294)
T 3m8t_A 47 IYYVG---TDGIAVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKETGAQLVA 123 (294)
T ss_dssp EEECC---CSSSCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHHCCEEEE
T ss_pred EEEeC---CCCeEEEEEEECCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhccCCEEEE
Confidence 56664 4789999999999999999997421 11 222 23 9999999999 88 7999
Q ss_pred CcchHHHHHHH---h-----hhhhcccceEEEecCCCeEEeeceEEeeeeecc
Q 039213 99 SPLDGKVFDRE---A-----LEELSKEGVTLVIKNGEMLGVSHLRNRRVLSNG 143 (156)
Q Consensus 99 t~~t~~ll~~~---~-----~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~~ 143 (156)
++.+.+++... . .........+..+++|+.+++|+.+++.+...+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pg 176 (294)
T 3m8t_A 124 GERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPG 176 (294)
T ss_dssp EGGGHHHHHHTCBTTBTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCS
T ss_pred ChHHHHHHhcccccCccccccCCCCCCCCceEeCCCCEEEeCCEEEEEEeCCC
Confidence 99999988311 0 001111123478999999999999999887544
No 16
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.26 E-value=5e-12 Score=109.96 Aligned_cols=95 Identities=17% Similarity=0.139 Sum_probs=70.0
Q ss_pred eEEEEccccCcccceEEEEE--eCCeEEEEecCCCCCCC-------CcCeeEEEcccCccc-cc-----------ccccC
Q 039213 41 LRVLPIGGLGEIGMNCMLVG--NYDRYILIDAGDPGFGF-------QYTNICIFIYNGEFN-IQ-----------QIDES 99 (156)
Q Consensus 41 i~~~~LGg~geig~Ncy~v~--~~~~~iIID~G~~~~~i-------~~~~~aI~LTHgH~D-IG-----------pVY~t 99 (156)
++.+..|+ .+.|||+|. .+++++|||||.....+ ..+..+||+||+|.| +| +||++
T Consensus 6 i~~~~~~~---~~~n~yli~~~~~~~~ilID~g~~~~~~~~~l~~~~~~i~~Il~TH~H~DH~gg~~~l~~~~~~~i~~~ 82 (474)
T 3tp9_A 6 LRRFYDEG---LAHASYLVGCQETGEACVIDPARDVEPYLLTAKREGLRIVAALETHIHADFVSGAREMADRAGAAICVS 82 (474)
T ss_dssp EEEEEETT---TTEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHHCCEEEEE
T ss_pred EEEEecCC---ceeEEEEEEECCCCEEEEEcCCCChHHHHHHHHHcCCeeEEEEcCcCchhhhCCHHHHHHHHCCcEEEc
Confidence 45566644 889999994 56899999999754333 222339999999999 88 89999
Q ss_pred cchHHHHHHHhhhhhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 100 PLDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 100 ~~t~~ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
+.+...+.. .......+..+++|+.+++|+++++.++..
T Consensus 83 ~~~~~~~~~----~~~~~~~~~~~~~g~~~~~g~~~i~~i~tP 121 (474)
T 3tp9_A 83 DEGPPEWKS----EYVKAYPHRLLKDGDELHFGNVRIVVMHTP 121 (474)
T ss_dssp CCSCGGGCC----GGGGGSSEEEECTTCEEEETTEEEEEEECC
T ss_pred Ccchhhhcc----cccccccceECCCCCEEEECCEEEEEEECC
Confidence 988776621 111223457899999999999999888743
No 17
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.26 E-value=1.1e-11 Score=95.79 Aligned_cols=86 Identities=13% Similarity=0.128 Sum_probs=66.0
Q ss_pred CcccceEEEEEeCCeEEEEecCCCCCC---C--------CcCeeEEEcccCccc-cc----------ccccCcchHHHHH
Q 039213 50 GEIGMNCMLVGNYDRYILIDAGDPGFG---F--------QYTNICIFIYNGEFN-IQ----------QIDESPLDGKVFD 107 (156)
Q Consensus 50 geig~Ncy~v~~~~~~iIID~G~~~~~---i--------~~~~~aI~LTHgH~D-IG----------pVY~t~~t~~ll~ 107 (156)
+.++.|||+|..++..+|||||..... + ..+..+||+||+|.| +| +||+++.+.+++.
T Consensus 27 ~~~~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~ 106 (219)
T 3l6n_A 27 KEYSANSMYLVTKKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNNKGIKTYATAKTNEFLK 106 (219)
T ss_dssp EEEEEEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHHTTCEEEECHHHHHHHH
T ss_pred ccccceEEEEEeCCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHhCCCEEEEcHHHHHHHH
Confidence 456889999999999999999975321 1 112239999999999 88 8999999988882
Q ss_pred HHhhhhhcccceEEEecCCCeEEeeceEEeeee
Q 039213 108 REALEELSKEGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
.. . .+.....+++|+.+++|+.+++.+.
T Consensus 107 ~~---~--~~~~~~~~~~g~~~~~g~~~i~~~~ 134 (219)
T 3l6n_A 107 KD---G--KATSTEIIKTGKPYRIGGEEFVVDF 134 (219)
T ss_dssp HT---T--CCCCSEECCTTSEEEETTEEEEEEC
T ss_pred hc---C--CCCCcEecCCCCEEEECCEEEEEEe
Confidence 11 1 1233568999999999998888875
No 18
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.24 E-value=1.7e-11 Score=97.79 Aligned_cols=97 Identities=14% Similarity=0.170 Sum_probs=69.8
Q ss_pred EEEccccCcccceEEEEEeCCeEEEEecCCCCC---------CCCcC--ee-EEEcccCccc-cc-----------cccc
Q 039213 43 VLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGF---------GFQYT--NI-CIFIYNGEFN-IQ-----------QIDE 98 (156)
Q Consensus 43 ~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~---------~i~~~--~~-aI~LTHgH~D-IG-----------pVY~ 98 (156)
++.+|+ .+.|||+|..++..+|||||.... ...+. ++ +||+||+|.| +| +||+
T Consensus 17 v~~i~~---~~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~v~~ 93 (263)
T 1k07_A 17 LYYVGT---DDLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQTKAKYMV 93 (263)
T ss_dssp EEECCB---SSBCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHHCCEEEE
T ss_pred EEEECC---CCeEEEEEEeCCceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhcCCEEEE
Confidence 556643 689999999999999999997521 11222 23 9999999999 88 7999
Q ss_pred CcchHHHH-HHHhhh---------hhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 99 SPLDGKVF-DREALE---------ELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 99 t~~t~~ll-~~~~~~---------~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
++.+.+++ ...... .......+..+++|+.+++|+.+++.+...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~i~~p 147 (263)
T 1k07_A 94 MDEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTP 147 (263)
T ss_dssp EHHHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECC
T ss_pred cHHHHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEECCeEEEEEECC
Confidence 99999888 311000 111112457899999999999888887643
No 19
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.21 E-value=3.2e-11 Score=96.71 Aligned_cols=94 Identities=18% Similarity=0.275 Sum_probs=69.2
Q ss_pred CcccceEEEEEeCCeEEEEecCCCCC---------CCCcC--ee-EEEcccCccc-cc-----------ccccCcchHHH
Q 039213 50 GEIGMNCMLVGNYDRYILIDAGDPGF---------GFQYT--NI-CIFIYNGEFN-IQ-----------QIDESPLDGKV 105 (156)
Q Consensus 50 geig~Ncy~v~~~~~~iIID~G~~~~---------~i~~~--~~-aI~LTHgH~D-IG-----------pVY~t~~t~~l 105 (156)
|..+.|||+|..++..+|||||.+.. ...+. ++ +||+||+|.| +| +||+++.+.++
T Consensus 54 g~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~ 133 (303)
T 4ax1_B 54 GTCGISALLVTSDAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKATGAPVYARAPAIDT 133 (303)
T ss_dssp SBSSSCCEEECCTTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHHCCCEEEEHHHHHH
T ss_pred CCCCceEEEEEeCCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhcCCEEEEcHHHHHH
Confidence 44689999999999999999997421 11222 23 9999999999 88 89999999998
Q ss_pred H-HHHh---h------hhhcccceEEEecCCCeEEeeceEEeeeeecc
Q 039213 106 F-DREA---L------EELSKEGVTLVIKNGEMLGVSHLRNRRVLSNG 143 (156)
Q Consensus 106 l-~~~~---~------~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~~ 143 (156)
+ .... . ........+..+++|+.+++|+.+++.+...+
T Consensus 134 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pg 181 (303)
T 4ax1_B 134 LKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPG 181 (303)
T ss_dssp HHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCS
T ss_pred HhccccCccccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCC
Confidence 8 3210 0 01112235688999999999999999887544
No 20
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.20 E-value=8.5e-11 Score=92.74 Aligned_cols=105 Identities=14% Similarity=0.150 Sum_probs=72.5
Q ss_pred CCeEEEEcc-ccCcccceEEEEEeCCeEEEEecCCCCC--CCC-cCee-EEEcccCccc-cc-----------ccccCcc
Q 039213 39 PPLRVLPIG-GLGEIGMNCMLVGNYDRYILIDAGDPGF--GFQ-YTNI-CIFIYNGEFN-IQ-----------QIDESPL 101 (156)
Q Consensus 39 ~~i~~~~LG-g~geig~Ncy~v~~~~~~iIID~G~~~~--~i~-~~~~-aI~LTHgH~D-IG-----------pVY~t~~ 101 (156)
..+.++.+| .......|||+|..++..+|||||.... .+. ...+ +||+||+|.| +| +||+++.
T Consensus 4 ~~i~~i~~~~~g~~~~~~~~li~~~~~~iLiD~G~~~~~~~l~~~~~i~~vi~TH~H~DH~gg~~~l~~~~~~~i~~~~~ 83 (261)
T 3adr_A 4 RGLHSIPAGPVEFPEIATVYVMCGEKLTVMIDAGVSNSIADFSFLDKLDYIVLTHLHIDHIGLLPELLQVYKAKVLVKSG 83 (261)
T ss_dssp CEEEEEECSCTTCGGGSEEEEEECSSCEEEECCCCTTCCCCCTTCSCCCEEECSCCSGGGTTTHHHHHHHSCCEEEEETT
T ss_pred CCeEEEeccCCCCCCceEEEEEEcCCcEEEEeCCCCCChhhcCCCCCCcEEEECCCCccccCCHHHHHHHhCCeEEECHH
Confidence 356777776 3234568999998778899999998532 122 2223 9999999999 88 6999998
Q ss_pred hHHHH-HHH---h------------hhhh-----cc-cceEEEecCCCeEEeeceEEeeeeecc
Q 039213 102 DGKVF-DRE---A------------LEEL-----SK-EGVTLVIKNGEMLGVSHLRNRRVLSNG 143 (156)
Q Consensus 102 t~~ll-~~~---~------------~~~~-----~~-~~~~~~l~~Gd~i~ig~~~v~~~~~~~ 143 (156)
+.+.+ +.. . .... .. ......+++|+.+++|+++++.+...+
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pG 147 (261)
T 3adr_A 84 FKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPG 147 (261)
T ss_dssp CTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTT
T ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEECCEEEEEEECCC
Confidence 88766 211 0 0001 11 123467899999999999998887544
No 21
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.19 E-value=3.9e-11 Score=98.35 Aligned_cols=100 Identities=13% Similarity=0.021 Sum_probs=70.1
Q ss_pred eEEEEccccCcccceEEEEEe--CCeEEEEecCCCC------------CCC-------CcCeeEEEcccCccc-cc----
Q 039213 41 LRVLPIGGLGEIGMNCMLVGN--YDRYILIDAGDPG------------FGF-------QYTNICIFIYNGEFN-IQ---- 94 (156)
Q Consensus 41 i~~~~LGg~geig~Ncy~v~~--~~~~iIID~G~~~------------~~i-------~~~~~aI~LTHgH~D-IG---- 94 (156)
++.+.. +..+.|||+|.. .++++|||||..- ..+ ..+..+||+||+|.| +|
T Consensus 7 i~~~~~---~~~~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~i~~Il~TH~H~DH~gg~~~ 83 (298)
T 4efz_A 7 VEGFFD---PATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPY 83 (298)
T ss_dssp EEEEEC---TTTCBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCEEEEEECSSCCSSSBCCHHH
T ss_pred EEEEec---CCcccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCcceEEEECCCchhhhhhHHH
Confidence 445555 458999999987 5789999999731 111 222239999999999 88
Q ss_pred -------ccccCcchHHHHHHHh-hhhhc------ccceEEEecCCCeEEeeceEEeeeeecc
Q 039213 95 -------QIDESPLDGKVFDREA-LEELS------KEGVTLVIKNGEMLGVSHLRNRRVLSNG 143 (156)
Q Consensus 95 -------pVY~t~~t~~ll~~~~-~~~~~------~~~~~~~l~~Gd~i~ig~~~v~~~~~~~ 143 (156)
+||+++.+.+++.... ..... ....+..+++|+.+++|+.+++.++..+
T Consensus 84 l~~~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~vi~tPG 146 (298)
T 4efz_A 84 LKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPG 146 (298)
T ss_dssp HHHHHCCEEEEETTHHHHHHHHHHHTTCCTTSCSSSTTSSEEECTTCEEEETTEEEEEEECCS
T ss_pred HHHHhCCcEEEChhHHHHHHHHHHhcCCcccccccccCCCEEeCCCCEEEECCEEEEEEECCC
Confidence 8999999888773111 11111 1123478999999999999998887543
No 22
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.18 E-value=3.1e-11 Score=93.26 Aligned_cols=87 Identities=20% Similarity=0.271 Sum_probs=61.1
Q ss_pred eEEEEccccCcccceEEEEEeCCeEEEEecCCCCCCC-------CcCeeEEEcccCccc-cc-----------ccccCcc
Q 039213 41 LRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFGF-------QYTNICIFIYNGEFN-IQ-----------QIDESPL 101 (156)
Q Consensus 41 i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~i-------~~~~~aI~LTHgH~D-IG-----------pVY~t~~ 101 (156)
|+++++| .++.|||+|..++..+|||||.....+ ..+..+||+||+|.| +| +||+++.
T Consensus 3 i~~~~~g---~~~~n~~li~~~~~~iliD~G~~~~~l~~~l~~~g~~i~~vilTH~H~DH~gg~~~l~~~~~~~v~~~~~ 79 (207)
T 2zwr_A 3 VFPVTLG---PLQENAYLVETGEGPVLIDPGDEPEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEALDLPVYLHPL 79 (207)
T ss_dssp EEEEEET---TTTEEEEEEEETTEEEEECCCSCHHHHHHHHHHHTCCCSCEECSCCCGGGTTTHHHHHHHHCCCEEECGG
T ss_pred EEEEecC---CcccEEEEEEeCCcEEEEeCCCCHHHHHHHHHHcCCcccEEEECCCChHHHccHHHHHHHhCCcEEECHH
Confidence 5666764 589999999999999999999643211 222239999999999 88 7999999
Q ss_pred hHHHH-HHHhh-h--hhcc---cceEEEecCCCeEE
Q 039213 102 DGKVF-DREAL-E--ELSK---EGVTLVIKNGEMLG 130 (156)
Q Consensus 102 t~~ll-~~~~~-~--~~~~---~~~~~~l~~Gd~i~ 130 (156)
+.+++ +.... . .... +..+..+++|+.++
T Consensus 80 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~i~ 115 (207)
T 2zwr_A 80 DLPLYEGADLAARAWGLAIPKPPLPVRPLEEGMRLF 115 (207)
T ss_dssp GHHHHHTHHHHHHHTTCCCCCCCSCCEECCTTCEET
T ss_pred HHHHHhCchhhhhhcCCCCCcCCCCceEeCCCCEEE
Confidence 99988 32111 0 1111 11356788998876
No 23
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.16 E-value=3.4e-12 Score=100.68 Aligned_cols=93 Identities=10% Similarity=0.132 Sum_probs=65.5
Q ss_pred EEccccCcccceEEEEEeCCeEEEEecCCCC---CCC--------CcCeeEEEcccCccc-cc----------ccccCcc
Q 039213 44 LPIGGLGEIGMNCMLVGNYDRYILIDAGDPG---FGF--------QYTNICIFIYNGEFN-IQ----------QIDESPL 101 (156)
Q Consensus 44 ~~LGg~geig~Ncy~v~~~~~~iIID~G~~~---~~i--------~~~~~aI~LTHgH~D-IG----------pVY~t~~ 101 (156)
.+++|.|.++.|||+|..++..+|||||... ..+ ..+..+||+||+|.| +| +||+++.
T Consensus 38 ~~~~~~g~~~~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~~~~~v~~~~~ 117 (243)
T 4hl2_A 38 LDMPGFGAVASNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANAL 117 (243)
T ss_dssp EEETTTEEEEEEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHTTCEEEEEHH
T ss_pred cccCCCCcccceEEEEEECCcEEEEECCCCCccHHHHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHhCCCeEEECHH
Confidence 3455567789999999999999999999631 111 223339999999999 88 8999999
Q ss_pred hHHHH-HHHhh-h-hhcccceEEEecCCCeEEeeceEE
Q 039213 102 DGKVF-DREAL-E-ELSKEGVTLVIKNGEMLGVSHLRN 136 (156)
Q Consensus 102 t~~ll-~~~~~-~-~~~~~~~~~~l~~Gd~i~ig~~~v 136 (156)
+.+++ +.... . .......+..+++|+.+++|++++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v 155 (243)
T 4hl2_A 118 SNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKV 155 (243)
T ss_dssp HHHHGGGTTCCCCSEEECBCTTSBBCGGGSTTCTTEEE
T ss_pred HHHHHhcccccccccccccccceEecCCCeEEECCEEE
Confidence 99888 31110 0 000011234578899999999888
No 24
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.13 E-value=9.8e-11 Score=93.80 Aligned_cols=86 Identities=14% Similarity=0.083 Sum_probs=59.6
Q ss_pred cceEEEEEeCCeEEEEecCCCCCC--CCcCee-EEEcccCccc-cc-------------ccccCcchHHHHHHHhhhhhc
Q 039213 53 GMNCMLVGNYDRYILIDAGDPGFG--FQYTNI-CIFIYNGEFN-IQ-------------QIDESPLDGKVFDREALEELS 115 (156)
Q Consensus 53 g~Ncy~v~~~~~~iIID~G~~~~~--i~~~~~-aI~LTHgH~D-IG-------------pVY~t~~t~~ll~~~~~~~~~ 115 (156)
..+||+|+.++..+|||||.+... +....+ +|||||+|.| ++ +||+++.+..+.........
T Consensus 38 ~~s~~li~~~~~~iLiD~G~~~~~~~~~~~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~- 116 (258)
T 3g1p_A 38 QPCSGVVKFNDAITLIDAGLHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCDDLFKHPGL- 116 (258)
T ss_dssp CBSEEEEEETTEEEEECCCCTTHHHHCCTTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCSTTTTTSCTT-
T ss_pred cCceEEEEECCcEEEEECCchHHHhhcCcccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhhHHHHhcCCCc-
Confidence 478999999999999999954311 112223 9999999999 87 68888877621111100001
Q ss_pred ccceEEEecCCCeEEeeceEEeeee
Q 039213 116 KEGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 116 ~~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
......+++|+.+++|+++++.+.
T Consensus 117 -~~~~~~~~~g~~~~~g~~~v~~~~ 140 (258)
T 3g1p_A 117 -LDFSHTVEPFVVFDLQGLQVTPLP 140 (258)
T ss_dssp -EEEEEECCTTCCEEETTEEEEEEE
T ss_pred -cccccccCCCCeEEECCEEEEEEE
Confidence 111257899999999999999876
No 25
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.09 E-value=9.9e-12 Score=100.81 Aligned_cols=62 Identities=11% Similarity=0.200 Sum_probs=50.6
Q ss_pred EccccCcccceEEEEEeCCeEEEEecCCCCCC---C--------CcCeeEEEcccCccc-cc----------ccccCcch
Q 039213 45 PIGGLGEIGMNCMLVGNYDRYILIDAGDPGFG---F--------QYTNICIFIYNGEFN-IQ----------QIDESPLD 102 (156)
Q Consensus 45 ~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~---i--------~~~~~aI~LTHgH~D-IG----------pVY~t~~t 102 (156)
...|.|.++.|||+|..+++++|||+|..... + ..+..+||+||+|.| +| |+|+++.+
T Consensus 66 ~~~~~G~~~~N~ylv~~~~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~ 145 (270)
T 4eyb_A 66 DMPGFGAVASNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALS 145 (270)
T ss_dssp EETTTEEEEEEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHTTCEEEEEHHH
T ss_pred ccCCCCccceEEEEEEECCEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHCCCeEEECHHH
Confidence 34566788899999999999999999974321 1 233349999999999 88 89999999
Q ss_pred HHHH
Q 039213 103 GKVF 106 (156)
Q Consensus 103 ~~ll 106 (156)
.+++
T Consensus 146 ~~~~ 149 (270)
T 4eyb_A 146 NQLA 149 (270)
T ss_dssp HHHG
T ss_pred HHHH
Confidence 9988
No 26
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.09 E-value=2.4e-10 Score=93.42 Aligned_cols=104 Identities=14% Similarity=0.086 Sum_probs=71.6
Q ss_pred CCCCeEEEEccccCcccc---------------------eEEEEEe--C-C--eEEEEecCCCCCC-C---CcCee-EEE
Q 039213 37 NGPPLRVLPIGGLGEIGM---------------------NCMLVGN--Y-D--RYILIDAGDPGFG-F---QYTNI-CIF 85 (156)
Q Consensus 37 ~~~~i~~~~LGg~geig~---------------------Ncy~v~~--~-~--~~iIID~G~~~~~-i---~~~~~-aI~ 85 (156)
....|++..||..+..|. +||+|+. + + ..+|||||..... + ....+ +||
T Consensus 25 ~~~~m~v~~LG~g~~~G~P~~~c~c~~C~~~~~~~~R~~~s~li~~~~~~g~~~~iLID~G~~~~~~l~~~~~~~id~Il 104 (293)
T 3md7_A 25 PRNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRMQMIDSGVHMLDAAV 104 (293)
T ss_dssp CCSEEEEEEEECBCTTCBSCTTCCCTTSCTTCGGGCBCBCEEEEEEECTTCCEEEEEECCCTTHHHHHHHHTCCCCSEEE
T ss_pred CCCcEEEEEEeecCCCCcccCCCCCccCCccCCCCcccccEEEEEecCCCCceeEEEEECCccHHHHHHhcCCCcccEEE
Confidence 345799999985433222 7899995 4 4 7999999953211 1 22233 999
Q ss_pred cccCccc-cc----------------ccccCcchHHHH-HHHhh--h-----hhcccceEEEecCCCeEEeec----eEE
Q 039213 86 IYNGEFN-IQ----------------QIDESPLDGKVF-DREAL--E-----ELSKEGVTLVIKNGEMLGVSH----LRN 136 (156)
Q Consensus 86 LTHgH~D-IG----------------pVY~t~~t~~ll-~~~~~--~-----~~~~~~~~~~l~~Gd~i~ig~----~~v 136 (156)
|||.|.| ++ |||+++.+.+.+ ..... . ........+.+++|+.+++++ +++
T Consensus 105 iTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~g~~~~~~~v 184 (293)
T 3md7_A 105 YTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYPPILSMHDIAPETPFSIEGAGGAIRF 184 (293)
T ss_dssp CSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCCTTCCCCCCEEEEECCTTCCEEECCTTCCEEE
T ss_pred EcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhccccccCCCCceEEEEcCCCCcEEECCCCCcEEE
Confidence 9999999 76 799999998888 32211 0 011112467889999999999 999
Q ss_pred eeee
Q 039213 137 RRVL 140 (156)
Q Consensus 137 ~~~~ 140 (156)
+.+.
T Consensus 185 ~~~~ 188 (293)
T 3md7_A 185 EPFS 188 (293)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 27
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.09 E-value=2e-10 Score=89.36 Aligned_cols=86 Identities=9% Similarity=0.060 Sum_probs=64.5
Q ss_pred CcccceEEEEEeCCeEEEEecCCCCC---CC--------CcCeeEEEcccCccc-cc----------ccccCcchHHHHH
Q 039213 50 GEIGMNCMLVGNYDRYILIDAGDPGF---GF--------QYTNICIFIYNGEFN-IQ----------QIDESPLDGKVFD 107 (156)
Q Consensus 50 geig~Ncy~v~~~~~~iIID~G~~~~---~i--------~~~~~aI~LTHgH~D-IG----------pVY~t~~t~~ll~ 107 (156)
+..+.|||+|..++..+|||||.... .+ ..+..+||+||+|.| +| +||+++.+.+++.
T Consensus 23 ~~~~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~g~~i~~vi~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~ 102 (223)
T 1m2x_A 23 TKYAANAVYLVTDKGVVVIDCPWGEDKFKSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGKIGAKTYSTKMTDSILA 102 (223)
T ss_dssp EEEEEEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHHTTCEEEEEHHHHHHHH
T ss_pred CcccccEEEEEeCCEEEEEeCCCChhHHHHHHHHHHHHhCCCeEEEEeccCCccccCchhhHhhCCCeEEEcHHHHHHHH
Confidence 45789999999999999999997421 11 122239999999999 88 6999998888872
Q ss_pred HHhhhhhcccceEEEecCCCeEEeeceEEeeee
Q 039213 108 REALEELSKEGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
.. ... .....+++|+.+++|+.+++.+.
T Consensus 103 ~~---~~~--~~~~~~~~g~~~~~g~~~i~~~~ 130 (223)
T 1m2x_A 103 KE---NKP--RAQYTFDNNKSFKVGKSEFQVYY 130 (223)
T ss_dssp HT---TCC--CCSEEESSCEEEEETTEEEEEEC
T ss_pred hc---Ccc--CCceecCCCceEEECCEEEEEEe
Confidence 11 111 12367899999999998888874
No 28
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.08 E-value=1.6e-10 Score=90.61 Aligned_cols=95 Identities=7% Similarity=0.071 Sum_probs=65.4
Q ss_pred ccccCcccceEEEEEeC-CeEEEEecCCCC---CCC--------CcCeeEEEcccCccc-cc----------ccccCcch
Q 039213 46 IGGLGEIGMNCMLVGNY-DRYILIDAGDPG---FGF--------QYTNICIFIYNGEFN-IQ----------QIDESPLD 102 (156)
Q Consensus 46 LGg~geig~Ncy~v~~~-~~~iIID~G~~~---~~i--------~~~~~aI~LTHgH~D-IG----------pVY~t~~t 102 (156)
+.+...++.|||+|..+ +..+|||||... ..+ ....++||+||+|.| +| +||+++.+
T Consensus 22 i~~~~~~~~n~~li~~~~~~~iLiD~G~~~~~~~~l~~~l~~~~~~~~~~vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~ 101 (246)
T 2fhx_A 22 VTDRDFYSSNVLVAKMLDGTVVIVSSPFENLGTQTLMDWVAKTMKPKKVVAINTHFHLDGTGGNEIYKKMGAETWSSDLT 101 (246)
T ss_dssp EEETTTTTEEEEEEECTTSEEEEESCCSSHHHHHHHHHHHHHHHCCSEEEEECCSSSHHHHTTHHHHHHTTCEEEEEHHH
T ss_pred EECcCCCCCCEEEEEeCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCcEEEEeCCCCccccChHHHHhhcCCEEEEcHHH
Confidence 33334578999999876 578999999752 111 233458999999999 88 79999999
Q ss_pred HHHH-HHHhh------h-----h----h---cc--cceEEEecCCCeEEeeceEEeeee
Q 039213 103 GKVF-DREAL------E-----E----L---SK--EGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 103 ~~ll-~~~~~------~-----~----~---~~--~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
.+++ ..... . . + .. +.....+++|+.+++|+.+++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~~~~ 160 (246)
T 2fhx_A 102 KQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSF 160 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEEC
T ss_pred HHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEECCEEEEEEe
Confidence 9888 31100 0 0 0 11 123346889999999998888764
No 29
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.07 E-value=1.5e-10 Score=92.51 Aligned_cols=90 Identities=13% Similarity=0.216 Sum_probs=65.0
Q ss_pred ccceEEEEEeCCeEEEEecCCCCC---------CCCcC--ee-EEEcccCccc-cc-----------ccccCcchHHHHH
Q 039213 52 IGMNCMLVGNYDRYILIDAGDPGF---------GFQYT--NI-CIFIYNGEFN-IQ-----------QIDESPLDGKVFD 107 (156)
Q Consensus 52 ig~Ncy~v~~~~~~iIID~G~~~~---------~i~~~--~~-aI~LTHgH~D-IG-----------pVY~t~~t~~ll~ 107 (156)
.+.|||+|..++..+|||||.... ...+. .+ +||+||+|.| +| +||+++.+.+++.
T Consensus 36 ~~~~~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~l~ 115 (269)
T 1sml_A 36 EDLTALLVQTPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRTGAKVAANAESAVLLA 115 (269)
T ss_dssp TTBCCEEEEETTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHSSCEEEECHHHHHHHH
T ss_pred CCcEEEEEEeCCceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhcCCeEEECHHHHHHHh
Confidence 578999999999999999997421 11222 33 9999999999 88 7999999988882
Q ss_pred -HHh-h--h----hhcccceEEEecCCCeEEeeceEEeeeee
Q 039213 108 -REA-L--E----ELSKEGVTLVIKNGEMLGVSHLRNRRVLS 141 (156)
Q Consensus 108 -~~~-~--~----~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~ 141 (156)
... . . .......+..+++|+.+++|+++++.+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~ 157 (269)
T 1sml_A 116 RGGSDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFM 157 (269)
T ss_dssp TTTCSBTTTBTSSCCCCCCCSEECCTTCEEEETTEEEEEEEC
T ss_pred cCCccccccccccCCCCCCCCeEeCCCCEEEECCEEEEEEEC
Confidence 110 0 0 01111234689999999999988888763
No 30
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.07 E-value=9.2e-11 Score=102.71 Aligned_cols=94 Identities=10% Similarity=0.032 Sum_probs=67.8
Q ss_pred eEEEEccccCcccceEEEEEe--CCeEEEEecCCCCCCC-------CcCeeEEEcccCccc-cc-----------ccccC
Q 039213 41 LRVLPIGGLGEIGMNCMLVGN--YDRYILIDAGDPGFGF-------QYTNICIFIYNGEFN-IQ-----------QIDES 99 (156)
Q Consensus 41 i~~~~LGg~geig~Ncy~v~~--~~~~iIID~G~~~~~i-------~~~~~aI~LTHgH~D-IG-----------pVY~t 99 (156)
++.+..| ..+.|||+|.+ +++++|||||.....+ ..+..+||+||+|.| +| +||++
T Consensus 27 i~~~~~~---~~~~nsyli~~~~~~~~vlID~g~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~a~v~~~ 103 (466)
T 3r2u_A 27 FKQFYDK---HLSQASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKLNANIYVS 103 (466)
T ss_dssp EEEEEET---TTTEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTCEEEEEECSSCCSSSCCCHHHHHHHHCCEEEEE
T ss_pred EEEEecC---CccceEEEEEeCCCCEEEEEcCCCCHHHHHHHHHHCCCeeeEEEECCCChhhhccHHHHHHhhCCeEEEC
Confidence 4446654 48999999975 5789999999643332 222339999999999 88 78998
Q ss_pred cchHHHHHHHhhhhhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 100 PLDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 100 ~~t~~ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
+.+.+.+.. . . .+..+..+++|+.+++|+++++.++..
T Consensus 104 ~~~~~~~~~---~-~-~~~~~~~~~~g~~l~~g~~~l~vi~tP 141 (466)
T 3r2u_A 104 GESDDTLGY---K-N-MPNHTHFVQHNDDIYVGNIKLKVLHTP 141 (466)
T ss_dssp CCSCTTTSC---C-S-CCTTCEEECTTCEEEETTEEEEEEECC
T ss_pred cchhhhhcc---c-c-CCCCCEEeCCCCEEEECCEEEEEEECC
Confidence 876554410 0 0 112457899999999999999988744
No 31
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.07 E-value=1.5e-10 Score=93.93 Aligned_cols=81 Identities=10% Similarity=0.154 Sum_probs=59.7
Q ss_pred ccc-eEEEEEeC--CeEEEEecCCCCCCC-------CcCeeEEEcccCccc-cc-----------ccccCcchHHHHHHH
Q 039213 52 IGM-NCMLVGNY--DRYILIDAGDPGFGF-------QYTNICIFIYNGEFN-IQ-----------QIDESPLDGKVFDRE 109 (156)
Q Consensus 52 ig~-Ncy~v~~~--~~~iIID~G~~~~~i-------~~~~~aI~LTHgH~D-IG-----------pVY~t~~t~~ll~~~ 109 (156)
.+. |||+|..+ +.++|||||.. ..+ ..+..+||+||+|.| +| +||+++.+.+.+
T Consensus 9 ~~~n~~yli~~~~~~~~~lID~g~~-~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~--- 84 (254)
T 1xm8_A 9 LKDNYAYILHDEDTGTVGVVDPSEA-EPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMDKDRI--- 84 (254)
T ss_dssp TTTEEEEEEECTTTCCEEEECCSSH-HHHHHHHHHHTCCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEEGGGGGGS---
T ss_pred cCCeEEEEEEECCCCEEEEEeCCCH-HHHHHHHHHcCCCccEEEECCCCCcccccHHHHHHHcCCeEEEchhhhhcC---
Confidence 345 49999985 67999999942 111 222239999999999 88 788888765544
Q ss_pred hhhhhcccceEEEecCCCeEEeeceEEeeeeecc
Q 039213 110 ALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSNG 143 (156)
Q Consensus 110 ~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~~ 143 (156)
. ..+..+++|+.+++|+.+++.+...+
T Consensus 85 -----~--~~~~~~~~g~~~~lg~~~~~vi~tPG 111 (254)
T 1xm8_A 85 -----P--GIDMALKDGDKWMFAGHEVHVMDTPG 111 (254)
T ss_dssp -----T--TEEEEECTTCEEEETTEEEEEEECCS
T ss_pred -----C--CCceeeCCCCEEEECCEEEEEEECCC
Confidence 1 13568999999999999988887544
No 32
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.07 E-value=1.7e-10 Score=92.77 Aligned_cols=90 Identities=11% Similarity=-0.027 Sum_probs=66.6
Q ss_pred ccceEEEEEeCCeEEEEecCCCC--CC--------CCcCee-EEEcccCccc-cc------------ccccCcchHHHH-
Q 039213 52 IGMNCMLVGNYDRYILIDAGDPG--FG--------FQYTNI-CIFIYNGEFN-IQ------------QIDESPLDGKVF- 106 (156)
Q Consensus 52 ig~Ncy~v~~~~~~iIID~G~~~--~~--------i~~~~~-aI~LTHgH~D-IG------------pVY~t~~t~~ll- 106 (156)
...|||+|.. ++.+|||||... .. +....+ +||+||+|.| +| +||+++.+.+.+
T Consensus 41 ~~~N~yli~~-~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~ 119 (262)
T 3hnn_A 41 TTSNSYVIEG-DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLR 119 (262)
T ss_dssp EEEEEEEEES-SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHH
T ss_pred cEEEEEEEEC-CCEEEEECCCcchHHHHHHHHHHhCChhhCCEEEECCCCcchhchHHHHHHHCCCCEEEECHHHHHHHH
Confidence 4679999997 789999999742 11 112233 9999999999 88 799999998888
Q ss_pred HHHhhhhhcccceEEEecCCCeEEee-ceEEeeeeecccee
Q 039213 107 DREALEELSKEGVTLVIKNGEMLGVS-HLRNRRVLSNGFIS 146 (156)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~Gd~i~ig-~~~v~~~~~~~~~~ 146 (156)
+... .....+..+++|+.+++| +.+++.+...+-+.
T Consensus 120 ~~~~----~~~~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht 156 (262)
T 3hnn_A 120 AAFP----DDNLNILPMRGKETLDLGKGHVLKFLPIPSPRW 156 (262)
T ss_dssp HHSS----SSCCEEEECCSSCEEECSTTCEEEEEECCCSSC
T ss_pred HHhC----CCCCceEEeCCCCEEEcCCCcEEEEEECCCCCC
Confidence 3211 012356789999999998 88888887655343
No 33
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.04 E-value=5.2e-10 Score=90.93 Aligned_cols=91 Identities=14% Similarity=0.072 Sum_probs=66.0
Q ss_pred cceEEEEEeCCeEEEEecCCCCCC----C-------CcC--ee-EEEcccCccc-cc----------ccccCcchHHHH-
Q 039213 53 GMNCMLVGNYDRYILIDAGDPGFG----F-------QYT--NI-CIFIYNGEFN-IQ----------QIDESPLDGKVF- 106 (156)
Q Consensus 53 g~Ncy~v~~~~~~iIID~G~~~~~----i-------~~~--~~-aI~LTHgH~D-IG----------pVY~t~~t~~ll- 106 (156)
+.|||+|..++.++|||||..... + .+. ++ +||+||.|.| +| +||+++.+.+.+
T Consensus 21 ~~n~~li~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~ 100 (317)
T 2zo4_A 21 TVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGLGARVFLHEEEFARGH 100 (317)
T ss_dssp EEEEEEEEETTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHTTCEEEEEGGGTTTHH
T ss_pred cEEEEEEEcCCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhCCCEEEEcHHHHHHHH
Confidence 689999999999999999985420 1 221 23 9999999999 88 699999988877
Q ss_pred HHHh--------------hhhhc-------------------ccceEEEecCCCeEEeeceEEeeeeecc
Q 039213 107 DREA--------------LEELS-------------------KEGVTLVIKNGEMLGVSHLRNRRVLSNG 143 (156)
Q Consensus 107 ~~~~--------------~~~~~-------------------~~~~~~~l~~Gd~i~ig~~~v~~~~~~~ 143 (156)
.... ....+ ....+..+++|+.+++|+.+++.+...+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~gg~~~~~i~tpG 170 (317)
T 2zo4_A 101 RFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPG 170 (317)
T ss_dssp HHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEEECCS
T ss_pred hhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeCCceEEEEECCC
Confidence 2110 00010 1124578999999999999988887543
No 34
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.04 E-value=6e-10 Score=90.59 Aligned_cols=93 Identities=13% Similarity=0.171 Sum_probs=65.5
Q ss_pred cccceEEEE-EeCCeEEEEecCCCC--CC----C-----CcCe-eEEEcccCccc-cc------------ccccCcchHH
Q 039213 51 EIGMNCMLV-GNYDRYILIDAGDPG--FG----F-----QYTN-ICIFIYNGEFN-IQ------------QIDESPLDGK 104 (156)
Q Consensus 51 eig~Ncy~v-~~~~~~iIID~G~~~--~~----i-----~~~~-~aI~LTHgH~D-IG------------pVY~t~~t~~ 104 (156)
..+.|||+| ..++.++|||||... .. + .... .+||+||+|.| +| +||+++.+.+
T Consensus 21 ~~~~n~~li~~~~~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~a~v~~~~~~~~ 100 (303)
T 2vw8_A 21 DVQVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQ 100 (303)
T ss_dssp CTTSCEEEEEEETTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEEEHHHHH
T ss_pred CCCceEEEEEeCCCceEEEECCCCCcHHHHHHHHHHHhcCcccceEEEeccCCccccCCHHHHHHhCCCCeEEECHHHHH
Confidence 368999999 488899999999853 11 1 1122 39999999999 88 6999999888
Q ss_pred HH-HHHhh-----------hhhc--------ccceEEEecCCCeEEeec-eEEeeeeecc
Q 039213 105 VF-DREAL-----------EELS--------KEGVTLVIKNGEMLGVSH-LRNRRVLSNG 143 (156)
Q Consensus 105 ll-~~~~~-----------~~~~--------~~~~~~~l~~Gd~i~ig~-~~v~~~~~~~ 143 (156)
.+ +.... ..+. .......+++|+.+++|+ .+++.+...+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~g~~l~~i~~pG 160 (303)
T 2vw8_A 101 AWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHG 160 (303)
T ss_dssp HTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTT
T ss_pred HHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecCCCeEEEEEECCC
Confidence 77 21100 0000 011236789999999998 8998887554
No 35
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.04 E-value=2e-10 Score=90.15 Aligned_cols=86 Identities=12% Similarity=0.020 Sum_probs=64.6
Q ss_pred CcccceEEEEEeCCeEEEEecCCCCC---CC-------CcCee-EEEcccCccc-cc----------ccccCcchHHHHH
Q 039213 50 GEIGMNCMLVGNYDRYILIDAGDPGF---GF-------QYTNI-CIFIYNGEFN-IQ----------QIDESPLDGKVFD 107 (156)
Q Consensus 50 geig~Ncy~v~~~~~~iIID~G~~~~---~i-------~~~~~-aI~LTHgH~D-IG----------pVY~t~~t~~ll~ 107 (156)
|.++.|||+|..++..+|||||.... .+ ....+ +||+||+|.| +| +||+++.+.+++.
T Consensus 33 g~~~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~ 112 (232)
T 1a7t_A 33 GMVPSNGMIVINNHQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQRKGVQSYANQMTIDLAK 112 (232)
T ss_dssp EEEEEEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHH
T ss_pred ccccceEEEEEeCCEEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHhCCCeEEEcHHHHHHHH
Confidence 55679999999999999999997421 11 11123 9999999999 88 6999998888872
Q ss_pred HHhhhhhcccceEEEecCCCeEEeeceEEeeee
Q 039213 108 REALEELSKEGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
.. .+. .....+++|+.+++|+.+++.+.
T Consensus 113 ~~---~~~--~~~~~~~~g~~~~~g~~~i~~~~ 140 (232)
T 1a7t_A 113 EK---GLP--VPEHGFTDSLTVSLDGMPLQCYY 140 (232)
T ss_dssp HH---TCC--CCSEEESSEEEEEETTEEEEEEC
T ss_pred hc---CCC--CCceecCCCCEEEECCeEEEEEe
Confidence 11 111 23467899999999998888875
No 36
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.02 E-value=2.3e-10 Score=88.62 Aligned_cols=96 Identities=13% Similarity=-0.021 Sum_probs=63.4
Q ss_pred EEccccCcccceEEEEEeCCeEEEEecCCCCC---CC-------CcCee-EEEcccCccc-cc----------ccccCcc
Q 039213 44 LPIGGLGEIGMNCMLVGNYDRYILIDAGDPGF---GF-------QYTNI-CIFIYNGEFN-IQ----------QIDESPL 101 (156)
Q Consensus 44 ~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~---~i-------~~~~~-aI~LTHgH~D-IG----------pVY~t~~ 101 (156)
+.+.+.+..+.|||+|..++..+|||||.... .+ ....+ +||+||+|.| +| +||+++.
T Consensus 16 ~~i~~~~~~~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~~~~~v~~~~~ 95 (233)
T 3q6v_A 16 YIVEDKEYVQENSMVYIGTDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKTLGAKIVATQM 95 (233)
T ss_dssp EEEEECSSSCEEEEEEECSSCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHH
T ss_pred EEEeCCCcCCCcEEEEEeCCeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhhCCCEEEEcHH
Confidence 33433355789999999999999999998431 11 11223 9999999999 88 7999999
Q ss_pred hHHHH-HHHhh---------hhh---cccceEEEecCCCeEEeeceEEeee
Q 039213 102 DGKVF-DREAL---------EEL---SKEGVTLVIKNGEMLGVSHLRNRRV 139 (156)
Q Consensus 102 t~~ll-~~~~~---------~~~---~~~~~~~~l~~Gd~i~ig~~~v~~~ 139 (156)
+.+++ ..... ... .....+..++++..+..+.+++-..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~ 146 (233)
T 3q6v_A 96 TYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGDFNLQNGSIRAMYL 146 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCSEEESSCEEETTTTEEEECC
T ss_pred HHHHHHhhhHHHHHHHhccccccccccccCCCEEeCCCeEEcCceEEEEEC
Confidence 99998 32110 000 1112335677777777666665443
No 37
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.01 E-value=3.1e-10 Score=89.59 Aligned_cols=88 Identities=19% Similarity=0.226 Sum_probs=58.8
Q ss_pred CcccceEEEEEeCCeEEEEecCCCCC-------------------------CC-------CcC--ee-EEEcccCccc-c
Q 039213 50 GEIGMNCMLVGNYDRYILIDAGDPGF-------------------------GF-------QYT--NI-CIFIYNGEFN-I 93 (156)
Q Consensus 50 geig~Ncy~v~~~~~~iIID~G~~~~-------------------------~i-------~~~--~~-aI~LTHgH~D-I 93 (156)
.++..|||+|+.++..+|||||.... .+ .+. ++ +||+||+|.| +
T Consensus 35 ~~~~~~~~lI~~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~l~~~g~~~~~I~~VilTH~H~DH~ 114 (254)
T 3dha_A 35 LNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHA 114 (254)
T ss_dssp EEEEEEEEEEEETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHHH
T ss_pred EEEeeEEEEEECCCccEEEECCCChhhhcccccccccccccccccccCchhhHHHHHHHcCCCHHHCCEEEcCCChhhcC
Confidence 35788999999999999999997521 01 111 12 9999999999 8
Q ss_pred c--------ccccCcchHHHH-HHHh-hhhhcccceEEEecCCCeEEeeceEEe
Q 039213 94 Q--------QIDESPLDGKVF-DREA-LEELSKEGVTLVIKNGEMLGVSHLRNR 137 (156)
Q Consensus 94 G--------pVY~t~~t~~ll-~~~~-~~~~~~~~~~~~l~~Gd~i~ig~~~v~ 137 (156)
| +||+++.+.+.+ .... ......+.....+.+|+...++++++-
T Consensus 115 gg~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 168 (254)
T 3dha_A 115 GGNGAFTNTPIIVQRTEYEAALHREEYMKECILPHLNYKIIEGDYEVVPGVQLL 168 (254)
T ss_dssp TTGGGCSSSCEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEECSSEEEETTEEEE
T ss_pred CChHHCCCCEEEECHHHHHHhhccccccccccCcccceEEecCCccccCCEEEE
Confidence 8 899999998888 2110 011111222345556777777775554
No 38
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.01 E-value=4.9e-10 Score=91.02 Aligned_cols=88 Identities=13% Similarity=0.201 Sum_probs=61.9
Q ss_pred CeEEEEccccCcccceEEEEEe-CCeEEEEecCCCCCCC-------CcCeeEEEcccCccc-cc------------cccc
Q 039213 40 PLRVLPIGGLGEIGMNCMLVGN-YDRYILIDAGDPGFGF-------QYTNICIFIYNGEFN-IQ------------QIDE 98 (156)
Q Consensus 40 ~i~~~~LGg~geig~Ncy~v~~-~~~~iIID~G~~~~~i-------~~~~~aI~LTHgH~D-IG------------pVY~ 98 (156)
.|++..+.. +. +.|||+|.. +++++|||||.. ..+ ..+..+||+||+|.| +| +||+
T Consensus 7 ~m~i~~i~~-~~-~n~~yli~~~~~~~vlID~G~~-~~i~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~ 83 (258)
T 2qed_A 7 SMNLNSIPA-FQ-DNYIWVLTNDEGRCVIVDPGEA-APVLKAIAEHKWMPEAIFLTHHHHDHVGGVKELLQHFPQMTVYG 83 (258)
T ss_dssp CCEEEEEEE-TT-TEEEEEEECTTSEEEEECCSCH-HHHHHHHHHHTCEEEEEECCSCCHHHHTTHHHHHHHCTTCEEEE
T ss_pred ccEEEEecc-cC-ceEEEEEEECCCcEEEEeCCCc-HHHHHHHHHcCCCCCEEEeCCCCccccCCHHHHHHHCCCCEEEe
Confidence 455666643 22 456999998 688999999953 111 222339999999999 88 5777
Q ss_pred CcchHHHHHHHhhhhhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 99 SPLDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 99 t~~t~~ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
++.+. ++ ..+..+++|+.+++|+.+++.+...
T Consensus 84 ~~~~~----------~~--~~~~~~~~g~~~~~g~~~~~vi~tP 115 (258)
T 2qed_A 84 PAETQ----------DK--GATHLVGDGDTIRVLGEKFTLFATP 115 (258)
T ss_dssp CGGGG----------GG--TCSEECCTTCEEEETTEEEEEEECC
T ss_pred ccccc----------CC--CCcEEeCCCCEEEECCcEEEEEECC
Confidence 76442 11 2346899999999999998888743
No 39
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.00 E-value=3.4e-10 Score=91.47 Aligned_cols=89 Identities=22% Similarity=0.265 Sum_probs=60.7
Q ss_pred cccceEEEEEeCCeEEEEecCCCCCC-----C-------CcCeeEEEcccCccc-cc---------------ccccCcch
Q 039213 51 EIGMNCMLVGNYDRYILIDAGDPGFG-----F-------QYTNICIFIYNGEFN-IQ---------------QIDESPLD 102 (156)
Q Consensus 51 eig~Ncy~v~~~~~~iIID~G~~~~~-----i-------~~~~~aI~LTHgH~D-IG---------------pVY~t~~t 102 (156)
..+.|||+|+.++.++|||||..... + ..+..+||+||+|.| +| +||+++.+
T Consensus 29 ~~~~n~~li~~~~~~ilID~G~~~~~~~~~~l~~~l~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~ 108 (289)
T 4ad9_A 29 LQGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRN 108 (289)
T ss_dssp BTCCEEEEECSSSSEEEECCCSTTCHHHHHHHHHHHHHTTCCEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCS
T ss_pred CCceEEEEEecCCceEEEeCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCC
Confidence 35899999999899999999975311 1 223339999999999 88 34444332
Q ss_pred HHHHHHHhhhhhcccceEEEecCCCeEEeeceEEeeeeecc
Q 039213 103 GKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSNG 143 (156)
Q Consensus 103 ~~ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~~ 143 (156)
....... . .....+..+++|+.+++|+.+++.+...+
T Consensus 109 ~~~~~~~--~--~~~~~~~~~~~g~~~~~gg~~~~~~~~pG 145 (289)
T 4ad9_A 109 PQREEII--G--NGEQQYVYLKDGDVIKTEGATLRVLYTPG 145 (289)
T ss_dssp SCCCCCB--T--TTTBCEEECCTTCEEEETTEEEEEEECCS
T ss_pred cchhhhc--c--CCCCceEEcCCCCEEEeCCeEEEEEECCC
Confidence 1111000 0 11234678999999999999999987544
No 40
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=98.98 E-value=6.5e-10 Score=90.51 Aligned_cols=84 Identities=14% Similarity=0.095 Sum_probs=59.9
Q ss_pred eEEEEccccCcccceEEEEEeC--CeEEEEecCCCCCCC-------CcCeeEEEcccCccc-cc------------cccc
Q 039213 41 LRVLPIGGLGEIGMNCMLVGNY--DRYILIDAGDPGFGF-------QYTNICIFIYNGEFN-IQ------------QIDE 98 (156)
Q Consensus 41 i~~~~LGg~geig~Ncy~v~~~--~~~iIID~G~~~~~i-------~~~~~aI~LTHgH~D-IG------------pVY~ 98 (156)
|+.+++| .+.|||+|..+ ++++|||||.. ..+ ..+..+||+||+|.| +| +||+
T Consensus 3 i~~i~~~----~~n~~yli~~~~~~~~vlID~G~~-~~i~~~l~~~g~~i~~IllTH~H~DH~gg~~~l~~~~~~~~v~~ 77 (260)
T 1qh5_A 3 VEVLPAL----TDNYMYLVIDDETKEAAIVDPVQP-QKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYG 77 (260)
T ss_dssp EEEEEET----TTEEEEEEEETTTTEEEEESCSSH-HHHHHHHHHHTCEEEEEECCCSSHHHHTTHHHHHHHSTTCEEEE
T ss_pred EEEEEec----CceEEEEEEECCCCEEEEEcCCCH-HHHHHHHHHcCCCccEEEeCCCCccccCCHHHHHHHCCCCEEEE
Confidence 5667774 35569999985 68999999942 111 222339999999999 88 4666
Q ss_pred CcchHHHHHHHhhhhhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 99 SPLDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 99 t~~t~~ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
++.+. +..+..+++|+.+++|+.+++.+...
T Consensus 78 ~~~~~-------------~~~~~~~~~g~~~~~g~~~~~vi~tP 108 (260)
T 1qh5_A 78 GDDRI-------------GALTHKITHLSTLQVGSLNVKCLATP 108 (260)
T ss_dssp SCTTS-------------TTCSEECCTTCEEEETTEEEEEEECC
T ss_pred CcccC-------------CCCCEEeCCCCEEEECCEEEEEEECC
Confidence 65321 12346789999999999888887643
No 41
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=98.97 E-value=2.5e-09 Score=91.24 Aligned_cols=66 Identities=17% Similarity=0.111 Sum_probs=50.9
Q ss_pred eEEEEccccCc-----ccceEEEEEeCCeEEEEecCCCCC------CCCcCee-EEEcccCccc-cc-------------
Q 039213 41 LRVLPIGGLGE-----IGMNCMLVGNYDRYILIDAGDPGF------GFQYTNI-CIFIYNGEFN-IQ------------- 94 (156)
Q Consensus 41 i~~~~LGg~ge-----ig~Ncy~v~~~~~~iIID~G~~~~------~i~~~~~-aI~LTHgH~D-IG------------- 94 (156)
|++.+||..+. .+.|||+|+.++..+|||||.... .+....+ +|||||.|.| ++
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~G~g~~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~ 80 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQS 80 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEETTEEEEECCCTTHHHHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEECCeEEEEeCChhHHHHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhcc
Confidence 57788875553 368999999999999999996321 1222233 9999999999 86
Q ss_pred ---------ccccCcchHHHH
Q 039213 95 ---------QIDESPLDGKVF 106 (156)
Q Consensus 95 ---------pVY~t~~t~~ll 106 (156)
+||+++.+.+++
T Consensus 81 ~~~~~~~~l~iygp~~~~~~l 101 (368)
T 3zwf_A 81 GSMVSKQPIEIYGPVGLRDFI 101 (368)
T ss_dssp ------CCEEEEEETTHHHHH
T ss_pred ccccCCCCeEEEEcHHHHHHH
Confidence 489999998888
No 42
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=98.96 E-value=1.1e-09 Score=95.38 Aligned_cols=89 Identities=18% Similarity=0.166 Sum_probs=66.9
Q ss_pred cceEEEEEeCCeEEEEecCCCCC---------C-CCcCee-EEEcccCccc-cc-------------ccccCcchHHHHH
Q 039213 53 GMNCMLVGNYDRYILIDAGDPGF---------G-FQYTNI-CIFIYNGEFN-IQ-------------QIDESPLDGKVFD 107 (156)
Q Consensus 53 g~Ncy~v~~~~~~iIID~G~~~~---------~-i~~~~~-aI~LTHgH~D-IG-------------pVY~t~~t~~ll~ 107 (156)
.-|||+|..+++.+|||+|.... . +....+ +||+||.|.| +| +||+++.+..++.
T Consensus 51 syNsYLI~~~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l~ 130 (410)
T 4dik_A 51 SYNAYLVKLNGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFGKRLLE 130 (410)
T ss_dssp EEEEEEEECSSCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHHH
T ss_pred EEEEEEEEECCeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHHHHHHH
Confidence 44999999999999999996431 1 111223 9999999999 88 6899998888882
Q ss_pred HHhhhhhcccceEEEecCCCeEEeeceEEeeeeecccee
Q 039213 108 REALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSNGFIS 146 (156)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~~~~~ 146 (156)
.. .. ......+++|+++++|+.+++++..-+.|.
T Consensus 131 ~~----~~-~~~~~~v~dGd~l~lG~~~L~~i~tPg~H~ 164 (410)
T 4dik_A 131 GF----YG-IKDVTVVKDGEEREIGGKKFKFVMTPWLHW 164 (410)
T ss_dssp HH----HC-CCCEEECCTTCEEEETTEEEEEEECTTSSS
T ss_pred hh----cC-ccceeEecCCCEEeecceEEEEecCCCCCC
Confidence 11 11 234578999999999999999988665443
No 43
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=98.95 E-value=5.1e-10 Score=93.79 Aligned_cols=86 Identities=20% Similarity=0.169 Sum_probs=64.3
Q ss_pred ccceEEEEEeCCeEEEEecCCCC--CCC--------CcCee-EEEcccCccc-cc------------ccccCcchHHHH-
Q 039213 52 IGMNCMLVGNYDRYILIDAGDPG--FGF--------QYTNI-CIFIYNGEFN-IQ------------QIDESPLDGKVF- 106 (156)
Q Consensus 52 ig~Ncy~v~~~~~~iIID~G~~~--~~i--------~~~~~-aI~LTHgH~D-IG------------pVY~t~~t~~ll- 106 (156)
.+.|||+|+ ++..+|||||... ..+ ....+ +||+||+|.| +| |||+++.+.+++
T Consensus 33 ~~~n~~li~-~~~~iliD~G~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~ 111 (402)
T 1e5d_A 33 TTYNAYLVE-DEKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAME 111 (402)
T ss_dssp EEEEEEEEC-SSSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHHHHHHH
T ss_pred cceEEEEEE-CCCEEEEeCCCCccHHHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHCCCCEEEEChHHHHHHH
Confidence 478999999 5678999999852 111 11223 9999999999 87 799999999888
Q ss_pred HHHhhhhhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 107 DREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
.... .+ ...+..+++|+.+++|+++++++...
T Consensus 112 ~~~~---~~-~~~~~~~~~g~~~~~g~~~~~~~~~p 143 (402)
T 1e5d_A 112 SHFH---YK-DWPVQVVKHGETLSLGKRTVTFYETR 143 (402)
T ss_dssp HHHC---CS-SCCEEEECTTCEEECSSCEEEEEECT
T ss_pred HHhC---CC-CCceEEcCCCCEEEECCCEEEEEeCC
Confidence 3221 11 23467899999999999999888654
No 44
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=98.94 E-value=4.7e-10 Score=87.52 Aligned_cols=84 Identities=8% Similarity=0.125 Sum_probs=62.0
Q ss_pred cccceEEEEEeCCeEEEEecCCCCC---CC------C-cCe-eEEEcccCccc-cc----------ccccCcchHHHHHH
Q 039213 51 EIGMNCMLVGNYDRYILIDAGDPGF---GF------Q-YTN-ICIFIYNGEFN-IQ----------QIDESPLDGKVFDR 108 (156)
Q Consensus 51 eig~Ncy~v~~~~~~iIID~G~~~~---~i------~-~~~-~aI~LTHgH~D-IG----------pVY~t~~t~~ll~~ 108 (156)
.++.|||+|+.++.++|||||.... .+ . ... .+||+||+|.| +| +||+++.+.+++..
T Consensus 38 ~~~~n~~li~~~~~~iliD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~ 117 (227)
T 1mqo_A 38 AVPSNGLVLNTSKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKERGIKAHSTALTAELAKK 117 (227)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHHTCEEECBHHHHHHHHH
T ss_pred eecceEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhCCcEEEeccchHHHHHh
Confidence 3578999999999999999998631 11 0 122 39999999999 88 69999988887731
Q ss_pred HhhhhhcccceEEEecCCCeEEeeceEEeee
Q 039213 109 EALEELSKEGVTLVIKNGEMLGVSHLRNRRV 139 (156)
Q Consensus 109 ~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~ 139 (156)
. ... .....+++|+.+++|+++++.+
T Consensus 118 ~---~~~--~~~~~~~~~~~~~~g~~~i~~~ 143 (227)
T 1mqo_A 118 N---GYE--EPLGDLQTVTNLKFGNMKVETF 143 (227)
T ss_dssp T---TCC--CCCCCBCSEEEEEETTEEEEEE
T ss_pred c---CCC--CCccccCCCCeeeECCEEEEEE
Confidence 1 111 1234677889999999888876
No 45
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=98.93 E-value=3e-09 Score=84.63 Aligned_cols=88 Identities=9% Similarity=0.018 Sum_probs=61.4
Q ss_pred ccceEEEEEeCCeEEEEecCCCCCC------------------------C-------CcC--ee-EEEcccCccc-cc--
Q 039213 52 IGMNCMLVGNYDRYILIDAGDPGFG------------------------F-------QYT--NI-CIFIYNGEFN-IQ-- 94 (156)
Q Consensus 52 ig~Ncy~v~~~~~~iIID~G~~~~~------------------------i-------~~~--~~-aI~LTHgH~D-IG-- 94 (156)
+..|||+|+.++..+|||||..... + .+. ++ +||+||+|.| +|
T Consensus 41 ~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~ 120 (276)
T 2r2d_A 41 IPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCV 120 (276)
T ss_dssp EEEEEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTG
T ss_pred eeeEEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCCh
Confidence 4679999999999999999986432 1 111 23 9999999999 88
Q ss_pred ------ccccCcchHHHH-HHHhh---------hhhc----ccceEEEec-CCCeEEee-ceEEeee
Q 039213 95 ------QIDESPLDGKVF-DREAL---------EELS----KEGVTLVIK-NGEMLGVS-HLRNRRV 139 (156)
Q Consensus 95 ------pVY~t~~t~~ll-~~~~~---------~~~~----~~~~~~~l~-~Gd~i~ig-~~~v~~~ 139 (156)
+||+++.+.+.+ ..... ..+. .......++ +|+.++++ ++++...
T Consensus 121 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~ 187 (276)
T 2r2d_A 121 EYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNF 187 (276)
T ss_dssp GGCSSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEE
T ss_pred hhCCCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEecCCEEEEeC
Confidence 799999888877 32110 0011 123456777 48999997 6777665
No 46
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=98.93 E-value=1.2e-09 Score=87.86 Aligned_cols=80 Identities=14% Similarity=0.091 Sum_probs=57.8
Q ss_pred CcccceEEEEEeC----CeEEEEecCCCC-CCC-------CcCeeEEEcccCccc-cc------------ccccCcchHH
Q 039213 50 GEIGMNCMLVGNY----DRYILIDAGDPG-FGF-------QYTNICIFIYNGEFN-IQ------------QIDESPLDGK 104 (156)
Q Consensus 50 geig~Ncy~v~~~----~~~iIID~G~~~-~~i-------~~~~~aI~LTHgH~D-IG------------pVY~t~~t~~ 104 (156)
+..+.|||+|..+ ++++|||||... ..+ .....+||+||.|.| +| +||+++.+..
T Consensus 11 ~~~~~~~yli~~~~~~~~~~ilID~g~~~~~~~~~~l~~~g~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~ 90 (245)
T 2gcu_A 11 NESSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGS 90 (245)
T ss_dssp TTTTEEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHTCEEEEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGGGCC
T ss_pred CCCceEEEEEEcCCCCCCcEEEEeCCCchHHHHHHHHHHCCCeeeEEEeCCCChhhhhhHHHHHHhCCCCeEEecccccc
Confidence 3478999999984 689999999742 111 222339999999999 88 3555543311
Q ss_pred HHHHHhhhhhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 105 VFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 105 ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
..+..+++|+.+++|+.+++.+...
T Consensus 91 -------------~~~~~~~~g~~~~~g~~~i~v~~tp 115 (245)
T 2gcu_A 91 -------------KADLFLEPGDKVSIGDIYLEVRATP 115 (245)
T ss_dssp -------------CCSEEECTTCEEEETTEEEEEEECC
T ss_pred -------------cCCEEcCCCCEEEECCEEEEEEECC
Confidence 1346789999999999988888643
No 47
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=98.88 E-value=7.8e-09 Score=83.25 Aligned_cols=88 Identities=13% Similarity=0.044 Sum_probs=63.2
Q ss_pred CCeEEEEccccCcccceEEEEEeCCeEEEEecCCCCCC---------------------CCc---C-ee-EEEcccCccc
Q 039213 39 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFG---------------------FQY---T-NI-CIFIYNGEFN 92 (156)
Q Consensus 39 ~~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~---------------------i~~---~-~~-aI~LTHgH~D 92 (156)
.+|++..+ |.|||+|+.++..|||||+..... +.. + .+ +|||||+|.|
T Consensus 3 ~~m~it~l------Gha~~li~~~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~D 76 (264)
T 3rpc_A 3 AMTQYTHI------RNATGKLTIKNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLD 76 (264)
T ss_dssp CCCEEEEE------ETTEEEEEETTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGG
T ss_pred ceEEEEEE------eCcEEEEEECCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchh
Confidence 47888877 679999999999999999764310 111 1 22 9999999999
Q ss_pred -cc-----------ccccC-cchHHHHHHHhhhhhcccceEEEecCCCeEEeeceEEeeee
Q 039213 93 -IQ-----------QIDES-PLDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 93 -IG-----------pVY~t-~~t~~ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
++ |||++ +.+++++... .+. ....+ |+.++++++++.++.
T Consensus 77 H~~~~~~~~~~~~~~v~~~~~~~~~~l~~~---g~~---~~~~~--~~~~~~~~~~i~~~p 129 (264)
T 3rpc_A 77 HWDDTAINSIPKSLPIFVQNTADKELITSQ---GFI---DVRII--FESLEFNGITLRKTG 129 (264)
T ss_dssp GSCHHHHHHSCTTSCEEESSHHHHHHHHHT---TCS---CEEEC--SSEEEETTEEEEEEC
T ss_pred hCCCHHHHhhccCCeEEEeCHHHHHHHHhc---CCC---eeEEe--cccEEECCEEEEEec
Confidence 88 89999 7777666211 111 22334 688999999998764
No 48
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=98.88 E-value=4.5e-09 Score=88.12 Aligned_cols=87 Identities=18% Similarity=0.164 Sum_probs=65.2
Q ss_pred cceEEEEEeCCeEEEEecCCCCC--CC-----------CcCee-EEEcccCccc-cc------------ccccCcchHHH
Q 039213 53 GMNCMLVGNYDRYILIDAGDPGF--GF-----------QYTNI-CIFIYNGEFN-IQ------------QIDESPLDGKV 105 (156)
Q Consensus 53 g~Ncy~v~~~~~~iIID~G~~~~--~i-----------~~~~~-aI~LTHgH~D-IG------------pVY~t~~t~~l 105 (156)
..|||+|..++..+|||||.... .+ ....+ +||+||.|.| +| +||+++.+.+.
T Consensus 34 ~~n~~li~~~~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~~~~~~~ 113 (404)
T 2ohh_A 34 TYNAYLVCGDEGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAVKG 113 (404)
T ss_dssp EECCEEEECSSCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHSTTCCEEECHHHHHH
T ss_pred eEEEEEEEeCCcEEEEeCCCCccHHHHHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHHCCCCEEEECHHHHHH
Confidence 56999999988899999998521 11 11223 9999999999 88 69999999888
Q ss_pred H-HHHhhhhhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 106 F-DREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 106 l-~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
+ +... .+.......+++|+.+++|+.+++.+...
T Consensus 114 ~~~~~~---~~~~~~~~~~~~g~~~~~g~~~i~~~~~p 148 (404)
T 2ohh_A 114 LLKHYP---SLREAEFMTVKTGDVLDLGGKTLTFLETP 148 (404)
T ss_dssp HHHHCG---GGGGSCEEECCTTCEEECSSCEEEEEECT
T ss_pred HHHHhc---ccccCCceEcCCCCEEEECCEEEEEEeCC
Confidence 8 3211 11122457899999999999988888754
No 49
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=98.85 E-value=1.7e-09 Score=83.41 Aligned_cols=57 Identities=7% Similarity=-0.074 Sum_probs=46.1
Q ss_pred CcccceEEEEEeCCeEEEEecCCCCC---C-------CCcCee-EEEcccCccc-cc----------ccccCcchHHHH
Q 039213 50 GEIGMNCMLVGNYDRYILIDAGDPGF---G-------FQYTNI-CIFIYNGEFN-IQ----------QIDESPLDGKVF 106 (156)
Q Consensus 50 geig~Ncy~v~~~~~~iIID~G~~~~---~-------i~~~~~-aI~LTHgH~D-IG----------pVY~t~~t~~ll 106 (156)
+..+.|||+|..++..+|||||.... . +....+ +||+||+|.| +| +||+++.+.+++
T Consensus 19 ~~~~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~ 97 (227)
T 3iog_A 19 YYVQENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKSIGAKVVSTRQTRDLM 97 (227)
T ss_dssp SSSCEEEEEEECSSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHH
T ss_pred CcccCcEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhhCCCeEEECHHHHHHH
Confidence 45789999999999999999997321 1 122233 9999999999 88 899999999988
No 50
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=98.84 E-value=3.1e-09 Score=88.95 Aligned_cols=86 Identities=9% Similarity=0.047 Sum_probs=63.6
Q ss_pred ccceEEEEEeCCeEEEEecCCCC--CCC--------CcCee-EEEcccCccc-cc------------ccccCcchHHHH-
Q 039213 52 IGMNCMLVGNYDRYILIDAGDPG--FGF--------QYTNI-CIFIYNGEFN-IQ------------QIDESPLDGKVF- 106 (156)
Q Consensus 52 ig~Ncy~v~~~~~~iIID~G~~~--~~i--------~~~~~-aI~LTHgH~D-IG------------pVY~t~~t~~ll- 106 (156)
...|||+|.. +..+|||||... ..+ ....+ +||+||.|.| +| +||+++.+.+.+
T Consensus 34 ~~~n~~li~~-~~~iliD~g~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~ 112 (398)
T 1ycg_A 34 TTYNAYLIVD-DKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSLK 112 (398)
T ss_dssp EEECCEEECS-SSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHHHHH
T ss_pred eeEEEEEEEC-CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHHCCCCEEEEcHHHHHHHH
Confidence 4689999995 468999999852 111 12233 9999999999 88 799999998888
Q ss_pred HHHhhhhhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 107 DREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
+.. ..+ ......+++|+.+++|+.+++++...
T Consensus 113 ~~~---~~~-~~~~~~~~~g~~~~~g~~~~~~~~~p 144 (398)
T 1ycg_A 113 AHY---SHI-DFNYTIVKTGTSVSLGKRSLTFIEAP 144 (398)
T ss_dssp HHT---CSC-CCEEEECCTTCEEECSSCEEEEEECT
T ss_pred HHh---CCC-CcceEEeCCCCEEeeCCcEEEEEeCC
Confidence 321 111 13467899999999999888887643
No 51
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=98.83 E-value=8.2e-09 Score=86.11 Aligned_cols=88 Identities=14% Similarity=0.156 Sum_probs=58.1
Q ss_pred CCeEEEEccccCccc-ceEEEEEe--CCeEEEEecCCCCCCC-----------C-----cCeeEEEcccCccc-cc--c-
Q 039213 39 PPLRVLPIGGLGEIG-MNCMLVGN--YDRYILIDAGDPGFGF-----------Q-----YTNICIFIYNGEFN-IQ--Q- 95 (156)
Q Consensus 39 ~~i~~~~LGg~geig-~Ncy~v~~--~~~~iIID~G~~~~~i-----------~-----~~~~aI~LTHgH~D-IG--p- 95 (156)
..|++..+.. .+ .|||+|.. ++.++|||||.....+ . .+..+||+||.|.| +| +
T Consensus 27 ~~m~i~~i~~---~~~n~~ylI~~~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~ 103 (311)
T 2p18_A 27 SAFSVTVVPT---LKDNFSYLINDHTTHTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAK 103 (311)
T ss_dssp TTEEEEEEEE---TTTEEEEEEEETTTTEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHH
T ss_pred CCcEEEEEec---CCCcEEEEEEeCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHH
Confidence 3555555532 34 45999998 5889999998643211 2 12239999999999 88 1
Q ss_pred ---------------cccCcchHHHHHHHhhhhhcccceEEEecCCCeEEeeceEEeeeee
Q 039213 96 ---------------IDESPLDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLS 141 (156)
Q Consensus 96 ---------------VY~t~~t~~ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~ 141 (156)
||+++.+ .+ +..+..+++|+.+++|+.+++.+..
T Consensus 104 l~~~~~~~~~~~~~~v~~~~~~----------~~--~~~~~~l~~g~~l~lg~~~l~vi~t 152 (311)
T 2p18_A 104 LKAELEAMNSTVPVVVVGGAND----------SI--PAVTKPVREGDRVQVGDLSVEVIDA 152 (311)
T ss_dssp HHHHHHSCC--CCCEEEEEGGG----------TC--TTCSEEECTTCEEEETTEEEEEEEC
T ss_pred HHHhhhhcccCCCCEEEEechh----------cC--CCCceEeCCCCEEEECCeEEEEEEC
Confidence 2222211 11 1245689999999999988888764
No 52
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=98.81 E-value=2.7e-09 Score=90.23 Aligned_cols=86 Identities=9% Similarity=0.090 Sum_probs=63.4
Q ss_pred ccceEEEEEeCCeEEEEecCCCCC--CC--------CcCee-EEEcccCccc-cc------------ccccCcchHHHH-
Q 039213 52 IGMNCMLVGNYDRYILIDAGDPGF--GF--------QYTNI-CIFIYNGEFN-IQ------------QIDESPLDGKVF- 106 (156)
Q Consensus 52 ig~Ncy~v~~~~~~iIID~G~~~~--~i--------~~~~~-aI~LTHgH~D-IG------------pVY~t~~t~~ll- 106 (156)
...|||+|.. +..+|||||.... .+ ....+ +||+||+|.| +| +||+++.+.+.+
T Consensus 39 ~~~n~~li~~-~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~ 117 (414)
T 2q9u_A 39 SSYNSYFIDD-ECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLK 117 (414)
T ss_dssp EEECCEEECS-SSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHHHHH
T ss_pred cceeEEEEEC-CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHHCCCCEEEECHHHHHHHH
Confidence 3689999986 7789999998421 11 11233 9999999999 88 699999998887
Q ss_pred HHHhhhhhcccceEEEecCCCeEEeeceEEeeeeec
Q 039213 107 DREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLSN 142 (156)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~~ 142 (156)
+... .. ......+++|+.+++|+.+++.+...
T Consensus 118 ~~~~---~~-~~~~~~~~~g~~~~lg~~~~~~~~~p 149 (414)
T 2q9u_A 118 ILYG---ME-KATWLIVDDKYTLKIGKRTLKFIPVP 149 (414)
T ss_dssp HHHC---CT-TCCEEECCTTCCEECSSCEEEEEECT
T ss_pred HHhC---CC-CCeeEEeCCCCEEEECCeEEEEEeCC
Confidence 3221 11 12457899999999999888887654
No 53
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=98.81 E-value=3.3e-09 Score=84.19 Aligned_cols=94 Identities=13% Similarity=0.086 Sum_probs=60.7
Q ss_pred CeEEEEccccCcccceEEEEEeCCeEEEEecCCCCCC-C--CcCee-EEEcccCccc-cc--------------------
Q 039213 40 PLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGFG-F--QYTNI-CIFIYNGEFN-IQ-------------------- 94 (156)
Q Consensus 40 ~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~~-i--~~~~~-aI~LTHgH~D-IG-------------------- 94 (156)
+|+.++.|+ .+.|||+ ++..+|||||..... + ....+ +|||||+|.| ++
T Consensus 2 ~i~~~~~g~---~~~~~~i---~~~~iLiD~G~~~~~~l~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~ 75 (280)
T 2e7y_A 2 NIIGFSKAL---FSTWIYY---SPERILFDAGEGVSTTLGSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPL 75 (280)
T ss_dssp CEEEEEETT---TEEEEEE---GGGTEEEEECTTHHHHHGGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCE
T ss_pred EEEEEecCC---ceEEEEE---CCcEEEEECCcchHHHhccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCC
Confidence 366677754 4445554 467899999974311 1 11122 9999999999 86
Q ss_pred ccccCcchHHHH-HHHhh-h----hhcccceEEEecCCCeEEee-----ceEEeeee
Q 039213 95 QIDESPLDGKVF-DREAL-E----ELSKEGVTLVIKNGEMLGVS-----HLRNRRVL 140 (156)
Q Consensus 95 pVY~t~~t~~ll-~~~~~-~----~~~~~~~~~~l~~Gd~i~ig-----~~~v~~~~ 140 (156)
+||+++.+. ++ +.... . ........+.+++|+.+++| +++++++.
T Consensus 76 ~v~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~ 131 (280)
T 2e7y_A 76 DVFYPEGNR-AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFR 131 (280)
T ss_dssp EEEEETTCH-HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEE
T ss_pred EEEECccHH-HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEE
Confidence 257777777 66 32111 1 11112346789999999999 89998875
No 54
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=98.80 E-value=2.8e-08 Score=83.72 Aligned_cols=95 Identities=9% Similarity=0.127 Sum_probs=67.5
Q ss_pred CCCCeEEEEccccCcccceEEEEEeC-CeEEEEe--cCCCCC-----------------------------C--CC---c
Q 039213 37 NGPPLRVLPIGGLGEIGMNCMLVGNY-DRYILID--AGDPGF-----------------------------G--FQ---Y 79 (156)
Q Consensus 37 ~~~~i~~~~LGg~geig~Ncy~v~~~-~~~iIID--~G~~~~-----------------------------~--i~---~ 79 (156)
....|++..+ |.|||+|+.+ +..|||| ||.... . +. +
T Consensus 34 ~~~~~~it~l------G~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~l 107 (360)
T 2wyl_A 34 APGTFAMWWL------GCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAI 107 (360)
T ss_dssp CTTCEEEEEE------ETTEEEEECTTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGGC
T ss_pred CCCcEEEEEe------cccEEEEEeCCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccCHHHc
Confidence 4557888888 5689999996 8999999 664210 0 11 1
Q ss_pred Cee-EEEcccCccc-cc---------------ccccCcchHHHHHHHhhhhhcccceEEEecCCCeEEeeceEEeeeee
Q 039213 80 TNI-CIFIYNGEFN-IQ---------------QIDESPLDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLS 141 (156)
Q Consensus 80 ~~~-aI~LTHgH~D-IG---------------pVY~t~~t~~ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~ 141 (156)
..+ +|||||+|.| +| +||+++.+.+++... .+. ......++.|+.++++++++.++..
T Consensus 108 ~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~~~---g~~-~~~~~~l~~g~~~~~g~~~v~~~~~ 182 (360)
T 2wyl_A 108 RQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGW---GVP-KERCIVVKPGDVVKVKDIEIHALDA 182 (360)
T ss_dssp CCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHHH---TCC-GGGEEECCTTCEEEETTEEEEEEEC
T ss_pred CCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHHHc---CCC-hheEEEcCCCCEEEECCEEEEEEec
Confidence 223 9999999999 87 478887777766211 121 1245789999999999999988764
No 55
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=98.79 E-value=1.9e-09 Score=86.85 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=44.5
Q ss_pred cccceEEEEEeCCeEEEEecCCCCC----------------CC-------CcC--ee-EEEcccCccc-cc---------
Q 039213 51 EIGMNCMLVGNYDRYILIDAGDPGF----------------GF-------QYT--NI-CIFIYNGEFN-IQ--------- 94 (156)
Q Consensus 51 eig~Ncy~v~~~~~~iIID~G~~~~----------------~i-------~~~--~~-aI~LTHgH~D-IG--------- 94 (156)
+++.|||+|+.+++.+|||||.... .+ .+. .+ +|||||+|.| +|
T Consensus 45 ~~~~n~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~ 124 (280)
T 3esh_A 45 NLPTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHA 124 (280)
T ss_dssp EEECCCEEEECSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCC
T ss_pred EEeEEEEEEEECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCccccccccc
Confidence 4689999999999999999998642 11 111 22 9999999999 88
Q ss_pred -----ccccCcchHHHH
Q 039213 95 -----QIDESPLDGKVF 106 (156)
Q Consensus 95 -----pVY~t~~t~~ll 106 (156)
+||+++.+.+++
T Consensus 125 ~fp~a~i~~~~~~~~~~ 141 (280)
T 3esh_A 125 IFENAIHVVQQDEWHEF 141 (280)
T ss_dssp SSTTCEEEEEHHHHHHH
T ss_pred CCCCCEEEECHHHHHHh
Confidence 588888888877
No 56
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=98.77 E-value=4.4e-08 Score=83.48 Aligned_cols=94 Identities=13% Similarity=0.152 Sum_probs=66.9
Q ss_pred CCCeEEEEccccCcccceEEEEEeC-CeEEEEe--cCCCCC-----------------------------C--CC---cC
Q 039213 38 GPPLRVLPIGGLGEIGMNCMLVGNY-DRYILID--AGDPGF-----------------------------G--FQ---YT 80 (156)
Q Consensus 38 ~~~i~~~~LGg~geig~Ncy~v~~~-~~~iIID--~G~~~~-----------------------------~--i~---~~ 80 (156)
...+++..+ |.|||+|+.+ +..|||| ||.... + +. +.
T Consensus 59 ~~~~~it~l------G~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~~~ 132 (379)
T 3bv6_A 59 PNTFSMWWL------GCTGIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIK 132 (379)
T ss_dssp TTCEEEEEE------ETTEEEEEETTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCC
T ss_pred CCceEEEEe------cccEEEEEeCCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccChHHCC
Confidence 456888877 5699999996 8999999 653210 0 11 22
Q ss_pred ee-EEEcccCccc-cc---------------ccccCcchHHHHHHHhhhhhcccceEEEecCCCeEEeeceEEeeeee
Q 039213 81 NI-CIFIYNGEFN-IQ---------------QIDESPLDGKVFDREALEELSKEGVTLVIKNGEMLGVSHLRNRRVLS 141 (156)
Q Consensus 81 ~~-aI~LTHgH~D-IG---------------pVY~t~~t~~ll~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~~ 141 (156)
.+ +|||||+|.| +| +||+++.+++++... .+. ....+.+++|+.++++++++..+..
T Consensus 133 ~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~~~---g~~-~~~~~~l~~g~~~~~g~~~v~~~~~ 206 (379)
T 3bv6_A 133 EIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLGW---GVP-QERCIVAKVGDVLEIGDVKIRVLDS 206 (379)
T ss_dssp CCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHHH---TCC-GGGEEECCTTCEEEETTEEEEEEEC
T ss_pred CCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHHHc---CCC-hhhEEEeCCCCEEEECCEEEEEEec
Confidence 23 9999999999 97 478887777766211 121 1245789999999999999988764
No 57
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=98.73 E-value=5.9e-09 Score=81.65 Aligned_cols=86 Identities=12% Similarity=0.026 Sum_probs=58.1
Q ss_pred ccCcccceEEEEEeCCeEEEEecCCCC---CCC-------CcCeeEEEcccCccc-cc----------ccccCcchHHHH
Q 039213 48 GLGEIGMNCMLVGNYDRYILIDAGDPG---FGF-------QYTNICIFIYNGEFN-IQ----------QIDESPLDGKVF 106 (156)
Q Consensus 48 g~geig~Ncy~v~~~~~~iIID~G~~~---~~i-------~~~~~aI~LTHgH~D-IG----------pVY~t~~t~~ll 106 (156)
|.+.++.|||+|..++..+|||||... ..+ ..+..+||+||+|.| +| +||+++.+.+++
T Consensus 27 g~~~~~~n~~li~~~~~~iliD~g~~~~~~~~~~~~l~~~g~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~ 106 (228)
T 1jjt_A 27 GWGVVPKHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELL 106 (228)
T ss_dssp TSCEEEEEEEEEEETTEEEEESCCSSHHHHHHHHHHHHTTTCEEEEEECSSSSHHHHTTHHHHHHTTCCEEEEHHHHHHH
T ss_pred CCccccceEEEEEECCcEEEEeCCCChhhHHHHHHHHHHcCCCeeEEEeCCCChhhhccHHHHHhCCCEEEEChHHHHHH
Confidence 335678999999999999999999742 111 222239999999999 88 799999998888
Q ss_pred HHHhhhhhcccceEEEecCCCeEEeeceEEeee
Q 039213 107 DREALEELSKEGVTLVIKNGEMLGVSHLRNRRV 139 (156)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~ 139 (156)
.... ...+. ..+ +|+.+.+++.+++.+
T Consensus 107 ~~~~---~~~~~--~~~-~g~~~~l~~~~i~~~ 133 (228)
T 1jjt_A 107 KKDG---KVQAT--NSF-SGVNYWLVKNKIEVF 133 (228)
T ss_dssp HHTT---CCCCS--EEE-CSSCCEEETTTEEEE
T ss_pred HhcC---CcCcc--ccc-cCcceEecCceEEEE
Confidence 2111 01111 223 366667776666654
No 58
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=98.72 E-value=5e-09 Score=83.48 Aligned_cols=56 Identities=13% Similarity=0.051 Sum_probs=44.9
Q ss_pred cccceEEEEEeCCeEEEEecCCCCC-----------------CC-------CcC--ee-EEEcccCccc-cc--------
Q 039213 51 EIGMNCMLVGNYDRYILIDAGDPGF-----------------GF-------QYT--NI-CIFIYNGEFN-IQ-------- 94 (156)
Q Consensus 51 eig~Ncy~v~~~~~~iIID~G~~~~-----------------~i-------~~~--~~-aI~LTHgH~D-IG-------- 94 (156)
.++.|||+|+.++..+|||||.... .+ .+. ++ +||+||+|.| +|
T Consensus 32 ~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~~~a 111 (274)
T 3aj3_A 32 RFPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYFPHA 111 (274)
T ss_dssp EEEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGCTTS
T ss_pred EeeEEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhCCCC
Confidence 4678999999999999999998531 11 121 23 9999999999 88
Q ss_pred ccccCcchHHHH
Q 039213 95 QIDESPLDGKVF 106 (156)
Q Consensus 95 pVY~t~~t~~ll 106 (156)
+||+++.+.+.+
T Consensus 112 ~v~~~~~~~~~~ 123 (274)
T 3aj3_A 112 KKICHRSEVPQA 123 (274)
T ss_dssp EEEEETTHHHHH
T ss_pred EEEECHHHHHHH
Confidence 799999998877
No 59
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=98.72 E-value=8.3e-09 Score=83.13 Aligned_cols=87 Identities=13% Similarity=0.134 Sum_probs=58.8
Q ss_pred CcccceEEEEEeCCeEEEEecCCCC---CCC--------CcCeeEEEcccCccc-cc----------ccccCcchHHHHH
Q 039213 50 GEIGMNCMLVGNYDRYILIDAGDPG---FGF--------QYTNICIFIYNGEFN-IQ----------QIDESPLDGKVFD 107 (156)
Q Consensus 50 geig~Ncy~v~~~~~~iIID~G~~~---~~i--------~~~~~aI~LTHgH~D-IG----------pVY~t~~t~~ll~ 107 (156)
+..+.|||+|..++..+|||+|... ..+ ..+..+||+||+|.| +| +||+++.+.+++.
T Consensus 64 ~~~~~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~g~~i~~VilTH~H~DH~gg~~~~~~~~a~v~~~~~~~~~~~ 143 (265)
T 2y8b_A 64 TVYSSNGLIVRDADELLLIDTAWGAKNTVALLAEIEKQIGLPVTRSISTHFHDDRVGGVDVLRAAGVATYTSPLTRQLAE 143 (265)
T ss_dssp EEEEEEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHHTTCEEEECHHHHHHHH
T ss_pred CcccceEEEEEECCeEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCChhhcCCHHHHhhCCCeEEECHHHHHHHH
Confidence 4578999999999999999999731 111 223339999999999 88 6999999988882
Q ss_pred HHhhhhhcccceEEEecCCCeEEeeceEEe
Q 039213 108 REALEELSKEGVTLVIKNGEMLGVSHLRNR 137 (156)
Q Consensus 108 ~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~ 137 (156)
.... ..........+++|+.+++|++++.
T Consensus 144 ~~~~-~~~~~~~~~~~~~~~~~~~g~~~v~ 172 (265)
T 2y8b_A 144 AAGN-EVPAHSLKALSSSGDVVRFGPVEVF 172 (265)
T ss_dssp HTTC-CCCSEECSSCSSTTEEEEETTEEEE
T ss_pred hccc-ccccccccccCCCCcEEeecCEEEE
Confidence 1100 0000000011367888888887774
No 60
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=98.71 E-value=1.5e-08 Score=85.14 Aligned_cols=89 Identities=12% Similarity=0.050 Sum_probs=63.0
Q ss_pred cceEEEEEeCCe-EEEEecCCCCC----C---------CCcCee-EEEcccCccc-cc-----------ccccCcchHHH
Q 039213 53 GMNCMLVGNYDR-YILIDAGDPGF----G---------FQYTNI-CIFIYNGEFN-IQ-----------QIDESPLDGKV 105 (156)
Q Consensus 53 g~Ncy~v~~~~~-~iIID~G~~~~----~---------i~~~~~-aI~LTHgH~D-IG-----------pVY~t~~t~~l 105 (156)
..+|++|+.++. ++|||||.... . +....+ +|||||+|.| ++ |||+++.+.+.
T Consensus 40 ~~ss~li~~~~~~~iLiD~G~~~~~~l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~~~~~~vy~~~~~~~~ 119 (321)
T 3jxp_A 40 TQSSIALSDDGVHWILCNASPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQVWCTDMVHQD 119 (321)
T ss_dssp CBCEEEEESSSSSEEEECCCTTHHHHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGGCCEEEEECHHHHHH
T ss_pred cceEEEEEeCCceEEEEeCCchHHHHHHhcccccccccCCcccCCEEEECCCChhhhhhHHHHHhcCCCeEEECHHHHHH
Confidence 467999998876 59999996311 0 122233 9999999999 87 89999999988
Q ss_pred H-HHHhhhhh-c---ccceEEEecCCCeEEe---eceEEeeeee
Q 039213 106 F-DREALEEL-S---KEGVTLVIKNGEMLGV---SHLRNRRVLS 141 (156)
Q Consensus 106 l-~~~~~~~~-~---~~~~~~~l~~Gd~i~i---g~~~v~~~~~ 141 (156)
+ ..+..... . .....+.+++|+.+++ ++++|+++..
T Consensus 120 l~~~~~~f~~~~~~~~~i~~~~i~~g~~~~i~~~~~~~V~~~~v 163 (321)
T 3jxp_A 120 LTTGFPLFNMLSHWNGGLQWNRIELEGSFVIDACPNLKFTPFPL 163 (321)
T ss_dssp TTTTSCHHHHHTTTTTCEEEEECCSSSCEECTTSTTEEEEEEEE
T ss_pred HHhhCccccccccccCceeEEEcCCCCeEEeccCCCeEEEEEEe
Confidence 8 32211010 0 1124578889999999 9999998664
No 61
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=98.67 E-value=1.6e-08 Score=84.38 Aligned_cols=54 Identities=17% Similarity=0.351 Sum_probs=42.2
Q ss_pred cceEEEEEeCCeEEEEecCCCC------CCC-------CcC--ee-EEEcccCccc-cc-------------ccccCcch
Q 039213 53 GMNCMLVGNYDRYILIDAGDPG------FGF-------QYT--NI-CIFIYNGEFN-IQ-------------QIDESPLD 102 (156)
Q Consensus 53 g~Ncy~v~~~~~~iIID~G~~~------~~i-------~~~--~~-aI~LTHgH~D-IG-------------pVY~t~~t 102 (156)
..|||+|+.++..+|||+|... ..+ .+. ++ +||+||.|.| +| +||+++.+
T Consensus 96 ~~n~~LI~~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~~fp~a~v~~~~~~ 175 (331)
T 1p9e_A 96 SVTGYLVNTGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFPNAVVRADQKE 175 (331)
T ss_dssp EEEEEEEECSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESSTTCEEECBHHH
T ss_pred EEEEEEEEECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccccCCCCEEEECHHH
Confidence 4679999999999999999752 112 121 23 9999999999 88 58888888
Q ss_pred HHHH
Q 039213 103 GKVF 106 (156)
Q Consensus 103 ~~ll 106 (156)
.+++
T Consensus 176 ~~~~ 179 (331)
T 1p9e_A 176 ADFW 179 (331)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8877
No 62
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=98.67 E-value=2.1e-08 Score=88.58 Aligned_cols=98 Identities=8% Similarity=0.218 Sum_probs=63.8
Q ss_pred CeEEEEccccCcccceEEEEEeCCeEEEEecCCCCC--------------------C-----C-------CcCee-EEEc
Q 039213 40 PLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGDPGF--------------------G-----F-------QYTNI-CIFI 86 (156)
Q Consensus 40 ~i~~~~LGg~geig~Ncy~v~~~~~~iIID~G~~~~--------------------~-----i-------~~~~~-aI~L 86 (156)
.|.++.+| .-+.||++|+.++..+|||||.... . + .+..+ +|||
T Consensus 7 ~I~~ldvG---~gqg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vil 83 (547)
T 2bib_A 7 KIHFINVQ---EGGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILV 83 (547)
T ss_dssp EEEEECBS---SSBCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEEC
T ss_pred eEEEEEcC---CCCceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEE
Confidence 45566664 3478999999999999999997521 0 0 12223 9999
Q ss_pred ccCccc-cc------------ccccCcchHHHH-HH-----------Hhhhhhcccc-eEE--EecCCCeEEeeceEEee
Q 039213 87 YNGEFN-IQ------------QIDESPLDGKVF-DR-----------EALEELSKEG-VTL--VIKNGEMLGVSHLRNRR 138 (156)
Q Consensus 87 THgH~D-IG------------pVY~t~~t~~ll-~~-----------~~~~~~~~~~-~~~--~l~~Gd~i~ig~~~v~~ 138 (156)
||+|.| +| +||+++.+.+.+ +. .....+.... ... .+..|+.+++|+++++.
T Consensus 84 TH~H~DHiggl~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~g~~~i~~ 163 (547)
T 2bib_A 84 THTHSDHIGNVDELLSTYPVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFGDMDIQL 163 (547)
T ss_dssp CCSCHHHHTTHHHHHHHSCBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEETTEEEEE
T ss_pred cCCCccccCCHHHHHHhCCccEEEECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEecCCeeEEE
Confidence 999999 88 489988776554 10 0000011111 111 35678899999999988
Q ss_pred ee
Q 039213 139 VL 140 (156)
Q Consensus 139 ~~ 140 (156)
+.
T Consensus 164 l~ 165 (547)
T 2bib_A 164 YN 165 (547)
T ss_dssp ES
T ss_pred ec
Confidence 76
No 63
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.50 E-value=9.5e-08 Score=87.56 Aligned_cols=91 Identities=15% Similarity=0.060 Sum_probs=62.7
Q ss_pred cceEEEEEeCCeEEEEecCCCCCC-----------CCcCee-EEEcccCccc-cc----------------ccccCcchH
Q 039213 53 GMNCMLVGNYDRYILIDAGDPGFG-----------FQYTNI-CIFIYNGEFN-IQ----------------QIDESPLDG 103 (156)
Q Consensus 53 g~Ncy~v~~~~~~iIID~G~~~~~-----------i~~~~~-aI~LTHgH~D-IG----------------pVY~t~~t~ 103 (156)
..|||+|..++.++|||+|..... +....+ +||+||.|.| +| +||+++.+.
T Consensus 122 ~~N~ylI~~~~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~~~~ 201 (658)
T 2cfu_A 122 LANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFM 201 (658)
T ss_dssp SSCEEEEECSSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTHH
T ss_pred CeEEEEEEECCEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEchhHH
Confidence 589999999899999999986421 111233 9999999999 87 488998877
Q ss_pred HHH-HHH----------h--h--hhhc---------------------ccceEEEe-cCCCeEEeeceEEeeeeecc
Q 039213 104 KVF-DRE----------A--L--EELS---------------------KEGVTLVI-KNGEMLGVSHLRNRRVLSNG 143 (156)
Q Consensus 104 ~ll-~~~----------~--~--~~~~---------------------~~~~~~~l-~~Gd~i~ig~~~v~~~~~~~ 143 (156)
+.+ ..+ . . ..++ ....+..+ ++|+++++|+.+++.++..|
T Consensus 202 ~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~dG~~l~lgg~~l~vi~tPG 278 (658)
T 2cfu_A 202 EAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPG 278 (658)
T ss_dssp HHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEETTEEEEEEECTT
T ss_pred HHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecCceEEEECCEEEEEEeCCC
Confidence 655 210 0 0 0000 01123566 68999999999999988655
No 64
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=98.48 E-value=9.1e-08 Score=74.80 Aligned_cols=50 Identities=16% Similarity=0.183 Sum_probs=38.8
Q ss_pred ccceEEEEEeCCeEEEEecCCCC--CCC-------Cc--Cee-EEEcccCccc-cc--------ccccCcc
Q 039213 52 IGMNCMLVGNYDRYILIDAGDPG--FGF-------QY--TNI-CIFIYNGEFN-IQ--------QIDESPL 101 (156)
Q Consensus 52 ig~Ncy~v~~~~~~iIID~G~~~--~~i-------~~--~~~-aI~LTHgH~D-IG--------pVY~t~~ 101 (156)
-+.|||+|+.++..+|||||... ..+ .+ .++ +||+||+|.| +| +||+++.
T Consensus 33 ~~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~~~~~v~~~~~ 103 (221)
T 1ztc_A 33 HFSTVVYLEHKDRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLFENATFYVHEV 103 (221)
T ss_dssp CBCCEEEEEETTEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGCTTCEEEEEGG
T ss_pred CceEEEEEEeCCeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhCCCCEEEEeHH
Confidence 46899999999999999999741 111 12 123 9999999999 88 7898876
No 65
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=98.33 E-value=2e-07 Score=80.04 Aligned_cols=94 Identities=11% Similarity=0.020 Sum_probs=60.4
Q ss_pred CeEEEEc-cccCcccceEEEE-EeCCeEEEEecCCCCCCCCcCee-EEEcccCccc-cc--------ccccCcchHHHH-
Q 039213 40 PLRVLPI-GGLGEIGMNCMLV-GNYDRYILIDAGDPGFGFQYTNI-CIFIYNGEFN-IQ--------QIDESPLDGKVF- 106 (156)
Q Consensus 40 ~i~~~~L-Gg~geig~Ncy~v-~~~~~~iIID~G~~~~~i~~~~~-aI~LTHgH~D-IG--------pVY~t~~t~~ll- 106 (156)
++++... |..+.-+++|.++ ..++..++||+.-.. ....+ +|||||+|.| +| |||+++.|++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~~pG~~ilVD~f~~~---~~~~IdaI~lTH~H~DHiggl~~~~~~pIy~s~~t~~ll~ 87 (367)
T 4b87_A 11 NKKIPESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYG---VVEGCTAYFLTHFHSDHYAGLSKHFTFPVYCSEITGNLLK 87 (367)
T ss_dssp ------------CCCCCCCGGGBCTTSSEEESCCSSS---SCTTCCEEECCCCCHHHHTTCSTTCCSCEEECHHHHHHHH
T ss_pred hhcccccccCCCCCCCCCceEEEECCCeEEEeCCCcC---CccCCcEEEECcChHHHhCCcccccCCcEEECHHHHHHHH
Confidence 3444433 3344455777655 346777999985431 22233 9999999999 88 899999999998
Q ss_pred HHHhhhhhcccceEEEecCCCeEEeeceEEeeee
Q 039213 107 DREALEELSKEGVTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 107 ~~~~~~~~~~~~~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
..... .......++.|+.+++++++++++.
T Consensus 88 ~~l~~----~~~~~~~l~~g~~~~ig~~~v~~~~ 117 (367)
T 4b87_A 88 NKLHV----QEQYIHPLPLDTECIVNGVKVVLLD 117 (367)
T ss_dssp HHSCC----CGGGEEECCBTSCEEETTEEEEEEE
T ss_pred HHhcc----ccceEEEeCCCCEEEECCEEEEEEe
Confidence 32211 1123567889999999999998876
No 66
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=98.26 E-value=5.7e-07 Score=73.54 Aligned_cols=52 Identities=15% Similarity=0.182 Sum_probs=40.0
Q ss_pred cceEEEEEeCCeEEEEecCCCCC------CCCcC--ee-EEEcccCccc-cc------------ccccCcchHH
Q 039213 53 GMNCMLVGNYDRYILIDAGDPGF------GFQYT--NI-CIFIYNGEFN-IQ------------QIDESPLDGK 104 (156)
Q Consensus 53 g~Ncy~v~~~~~~iIID~G~~~~------~i~~~--~~-aI~LTHgH~D-IG------------pVY~t~~t~~ 104 (156)
..|||+|+.++..+|||||.... ...+. .+ +||+||+|.| +| |||+++.+.+
T Consensus 32 ~g~s~li~~~~~~iLiD~G~~~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~~~~~v~~~~~~~~ 105 (284)
T 2p4z_A 32 HGLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEILN 105 (284)
T ss_dssp SSCEEEEEETTEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHCTTCEEEEEGGGGS
T ss_pred CEEEEEEEECCeEEEEeCCCCHHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHHcCCCceecCHHHHH
Confidence 67899999999999999997431 01121 23 9999999999 87 7888887753
No 67
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=97.48 E-value=2.1e-07 Score=85.87 Aligned_cols=94 Identities=12% Similarity=-0.034 Sum_probs=61.0
Q ss_pred cceEEEEEeCCeEEEEecCCCCC---CC----C--c--Cee-EEEcccCccc-cc----------------ccccCcchH
Q 039213 53 GMNCMLVGNYDRYILIDAGDPGF---GF----Q--Y--TNI-CIFIYNGEFN-IQ----------------QIDESPLDG 103 (156)
Q Consensus 53 g~Ncy~v~~~~~~iIID~G~~~~---~i----~--~--~~~-aI~LTHgH~D-IG----------------pVY~t~~t~ 103 (156)
-.|||+|..++.++|||||.... .+ . . ..+ +||+||+|.| +| |||+|+.+.
T Consensus 132 ~~N~~lI~~~~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~~~~ 211 (668)
T 2yhe_A 132 PANMTIIEGDSGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPSGFM 211 (668)
Confidence 37999999989999999997542 11 1 1 122 9999999999 87 488888863
Q ss_pred HHH--H-HH----------hhh-----------------------h-hcc-cceEEEecCCCeEEeeceEEeeeeeccce
Q 039213 104 KVF--D-RE----------ALE-----------------------E-LSK-EGVTLVIKNGEMLGVSHLRNRRVLSNGFI 145 (156)
Q Consensus 104 ~ll--~-~~----------~~~-----------------------~-~~~-~~~~~~l~~Gd~i~ig~~~v~~~~~~~~~ 145 (156)
+.. . .. ... . ... ++....+++|+++++|+.+++.++..+-|
T Consensus 212 e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~dg~~l~lgg~~l~vi~tPG~H 291 (668)
T 2yhe_A 212 EHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLIEKPYERHTVDGVELEFQLTLGSE 291 (668)
Confidence 321 1 00 000 0 000 11212356899999999999998866633
Q ss_pred e
Q 039213 146 S 146 (156)
Q Consensus 146 ~ 146 (156)
.
T Consensus 292 t 292 (668)
T 2yhe_A 292 A 292 (668)
Confidence 3
No 68
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.15 E-value=1.5e-06 Score=68.85 Aligned_cols=43 Identities=16% Similarity=0.292 Sum_probs=30.6
Q ss_pred ccceEEEEEeCCeEEEEecCCCCCCCC--cCee-EEEcccCccc-cc
Q 039213 52 IGMNCMLVGNYDRYILIDAGDPGFGFQ--YTNI-CIFIYNGEFN-IQ 94 (156)
Q Consensus 52 ig~Ncy~v~~~~~~iIID~G~~~~~i~--~~~~-aI~LTHgH~D-IG 94 (156)
.+.|||+|+.++..+|||||.....+. ...+ +|||||.|.| ++
T Consensus 18 ~~~~~~li~~~~~~iLiD~g~~~~~~~~~~~~id~VliTH~H~DH~~ 64 (220)
T 1vjn_A 18 FGHACFALEMEGKTIVTDPFDESVGYPIPNVTADVVTESHQHFDHNA 64 (220)
T ss_dssp EETTEEEEEETTEEEEESCCC-----CCCCCBCSEEECSSCC---CG
T ss_pred ccCCEEEEEECCEEEEEcCCCCcCCCCcCCCCcCEEEECCCCCCCCC
Confidence 478999999999999999997532222 2233 9999999999 98
No 69
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=97.99 E-value=7.8e-06 Score=69.42 Aligned_cols=54 Identities=9% Similarity=0.073 Sum_probs=38.5
Q ss_pred EEEcccCccc-cc--------ccccCcchHHHH-HHHhhhhhcccceEEEecCCCeEE-------eeceEEeeee
Q 039213 83 CIFIYNGEFN-IQ--------QIDESPLDGKVF-DREALEELSKEGVTLVIKNGEMLG-------VSHLRNRRVL 140 (156)
Q Consensus 83 aI~LTHgH~D-IG--------pVY~t~~t~~ll-~~~~~~~~~~~~~~~~l~~Gd~i~-------ig~~~v~~~~ 140 (156)
||||||+|.| +| |||+++.|++++ .+..... .....+..|+.+. +|+++++++.
T Consensus 27 ai~lTH~H~DHiggl~~l~~~pVy~s~~t~~ll~~~l~~~~----~~~~~~~~~~~~~i~~~~~~~g~~~v~~~~ 97 (336)
T 3zdk_A 27 LFFLSHMHSDHTVGLSSTWARPLYCSPITAHLLHRHLQVSK----QWIQALEVGESHVLPLDEIGQETMTVTLLD 97 (336)
T ss_dssp EEECCCCCGGGSTTCSTTCCSCEEECHHHHHHHHHHHCCCT----TTEEECCTTSEEEEESSSSSSCEEEEEEEE
T ss_pred EEEECCChHHHHCchHHHcCCCEEecHHHHHHHHHhhhhcc----cceEecCCCCeEEecCcccccCCEEEEEEE
Confidence 9999999999 88 899999999999 3332211 1223455555544 4888888875
No 70
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=97.98 E-value=1.2e-06 Score=67.48 Aligned_cols=54 Identities=19% Similarity=0.150 Sum_probs=41.1
Q ss_pred CcccceEEEEEeCCeEEEEecCCCCCCC-------CcCeeEEEcccCccc-cc-----------ccccCcchHHHH
Q 039213 50 GEIGMNCMLVGNYDRYILIDAGDPGFGF-------QYTNICIFIYNGEFN-IQ-----------QIDESPLDGKVF 106 (156)
Q Consensus 50 geig~Ncy~v~~~~~~iIID~G~~~~~i-------~~~~~aI~LTHgH~D-IG-----------pVY~t~~t~~ll 106 (156)
...+.|||+|..++..+|||||.....+ . +..+||+||+ | +| +||+++.+.+.+
T Consensus 20 ~~~~~n~~li~~~~~~iliD~g~~~~~~~~~l~~~g-~i~~ii~TH~--DH~gg~~~~~~~~~a~v~~~~~~~~~~ 92 (201)
T 2p97_A 20 RNIDFNGFAWIRPEGNILIDPVALSNHDWKHLESLG-GVVWIVLTNS--DHVRSAKEIADQTYTKIAGPVAEKENF 92 (201)
T ss_dssp TTEEEEEEEECCTTCCEEESCCCCCHHHHHHHHHTT-CCSEEECSSG--GGCTTHHHHHHHSCCEEEEEGGGTTSC
T ss_pred CCcceeEEEEEeCCeeEEEECCCCcHHHHHHHHhcC-CCCEEEECCc--hhhhhHHHHHHhcCCEEEEcHhHhhhh
Confidence 4578999999998899999999422111 2 2239999999 9 88 688888776655
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=97.61 E-value=2.1e-05 Score=65.21 Aligned_cols=46 Identities=17% Similarity=0.190 Sum_probs=34.8
Q ss_pred cceEEEEEeCCeEEEEecCCCCCCC-------CcCe-eEEEcccCccc-cc--------ccccCcchH
Q 039213 53 GMNCMLVGNYDRYILIDAGDPGFGF-------QYTN-ICIFIYNGEFN-IQ--------QIDESPLDG 103 (156)
Q Consensus 53 g~Ncy~v~~~~~~iIID~G~~~~~i-------~~~~-~aI~LTHgH~D-IG--------pVY~t~~t~ 103 (156)
..+||+|+. +|||+|... .+ .+.. .+|+|||+|.| +| |||+++.+.
T Consensus 31 ~G~s~lie~----iLiD~G~~~-~l~~~l~~~gi~~~~~IvlTH~H~DH~ggl~~l~~~~v~~~~~~~ 93 (267)
T 3h3e_A 31 HGFSVLVDS----VLFDTGKSD-VFLKNARKLGIDLPKDVLISHGHYDHAGGLLYLSGKRVWLRKEAL 93 (267)
T ss_dssp SSCEEEETT----EEECCCSSS-HHHHHHHHTTCCCCSEEECSCSCHHHHGGGGGCCSCEEEEEGGGG
T ss_pred cEeHHeeee----EEEECCCcH-HHHHHHHHCCcCcCCEEEECCCChhhhCCHHHhcCCEEEECHHHH
Confidence 567888876 999999864 12 2221 49999999999 88 788887654
No 72
>4h4n_A Hypothetical protein BA_2335; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.10A {Bacillus anthracis}
Probab=46.31 E-value=7.8 Score=25.53 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=26.7
Q ss_pred hhhcccCCCCCCCeEEEEccccCcccceEEEEE
Q 039213 28 KMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVG 60 (156)
Q Consensus 28 ~~~~~~~~~~~~~i~~~~LGg~geig~Ncy~v~ 60 (156)
+++-.+|+..+.++++.++|++.|+=+|.-++.
T Consensus 6 k~pi~fkvppnsklkvtffgp~nevitnvsiin 38 (67)
T 4h4n_A 6 KKPIAFKVPPNSKLKVTFFGPYNEVITNVSIIN 38 (67)
T ss_dssp CCCEEEEECTTEEEEEEEECTTSCEEEEEEEEE
T ss_pred cCceEEEcCCCCeeEEEEecchhhhhhhHHHHH
Confidence 344556677788999999999999999987775
No 73
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=24.45 E-value=22 Score=25.40 Aligned_cols=10 Identities=30% Similarity=0.664 Sum_probs=8.3
Q ss_pred EEEcccCccc
Q 039213 83 CIFIYNGEFN 92 (156)
Q Consensus 83 aI~LTHgH~D 92 (156)
-|||||++.|
T Consensus 6 ~lFISh~~~d 15 (111)
T 1eiw_A 6 RLYITEGEVE 15 (111)
T ss_dssp EEEECCCCSH
T ss_pred EEEEecccHh
Confidence 4899999877
No 74
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=21.96 E-value=75 Score=22.83 Aligned_cols=22 Identities=9% Similarity=0.137 Sum_probs=18.4
Q ss_pred eEEEecCCCeEEeeceEEeeee
Q 039213 119 VTLVIKNGEMLGVSHLRNRRVL 140 (156)
Q Consensus 119 ~~~~l~~Gd~i~ig~~~v~~~~ 140 (156)
....|++||.|.||+....+..
T Consensus 104 ~~~~L~~GD~I~lG~~~l~f~~ 125 (132)
T 3va4_A 104 VSHRLRDQELILFADFPCQYHR 125 (132)
T ss_dssp CCEECCTTCEEEETTEEEEEEE
T ss_pred CEEECCCCCEEEECCEEEEEEE
Confidence 3468999999999998888765
No 75
>2ezd_A High mobility group protein HMG-I/HMG-Y; DNA binding protein, minor groove DNA binding, transcriptional CO-activator, architectural factor; HET: DNA; NMR {Homo sapiens} SCOP: j.10.1.1 PDB: 2eze_A*
Probab=21.00 E-value=55 Score=17.94 Aligned_cols=17 Identities=35% Similarity=0.524 Sum_probs=11.4
Q ss_pred CCCCCCcCCCC--CCCCcc
Q 039213 3 ESKVPRRRTGR--TEGPRK 19 (156)
Q Consensus 3 ~~~~~~~r~~~--~e~~~~ 19 (156)
..||||-||+- +-+..|
T Consensus 3 tpKrpRgRpkGSKNk~~~k 21 (26)
T 2ezd_A 3 TPKRPRGRPKGSKNKGAAK 21 (26)
T ss_dssp SCCCCSSCCTTCCCCSCCC
T ss_pred CCcCCCCCcCcccccCccc
Confidence 46899999985 444443
Done!