BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039216
(394 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FLE8|Y5986_ARATH Uncharacterized protein At5g39865 OS=Arabidopsis thaliana
GN=At5g39865 PE=1 SV=1
Length = 390
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 92/168 (54%), Gaps = 22/168 (13%)
Query: 248 GDESVIFYTTTLRGIRKTFEDCSSVRFLLESFKVIFFERDVSMHIEFREELWKVLDCK-- 305
G E V+ Y T+LRGIRKT+EDC ++R +L+S + ERDVSMH F++EL K+L+ K
Sbjct: 223 GKERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFN 282
Query: 306 ----AVPPRLFIKGRYIGGAAEVLTLHEQGKLRPLFDGIPIDRSDGP-----CDGCAGVR 356
PR+F+ +Y+GG E+ L+E G+L L + P C+ C VR
Sbjct: 283 NGVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVR 342
Query: 357 FVLCFRCCGSHKV----------VTGDGLASQCQECNENGLIICPYCC 394
FV C C GS K+ VT G +C CNENGLI C CC
Sbjct: 343 FVPCETCSGSCKLYHEGEEEDEGVTEYGF-QRCPYCNENGLIRCHVCC 389
>sp|Q9LH89|Y3885_ARATH Uncharacterized protein At3g28850 OS=Arabidopsis thaliana
GN=At3g28850 PE=1 SV=1
Length = 428
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 90/179 (50%), Gaps = 32/179 (17%)
Query: 248 GDESVIFYTTTLRGIRKTFEDCSSVRFLLESFKVIFFERDVSMHIEFREELWKVLDCK-- 305
G E VI Y T+LRGIRKT+E+ VR +L+S + ERDVSMH F++EL ++L K
Sbjct: 249 GKERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELLGEKFN 308
Query: 306 ----AVPPRLFIKGRYIGGAAEVLTLHEQGKLRPLFDGIPI--DRSDGP---CDGCAGVR 356
PR+F+ +YIGGA E+ L+E GKL L G + +G C+ C VR
Sbjct: 309 KGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEENQNGNGLECEACGDVR 368
Query: 357 FVLCFRCCGSHKVVTGDGLAS---------------------QCQECNENGLIICPYCC 394
FV C C GS KV C +CNENGLI CP CC
Sbjct: 369 FVPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYGFQTCPDCNENGLIRCPVCC 427
>sp|Q9VNL4|GRCR1_DROME Glutaredoxin domain-containing cysteine-rich protein CG31559
OS=Drosophila melanogaster GN=CG31559 PE=1 SV=2
Length = 454
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 252 VIFYTTTLRGIRKTFEDCSSVRFLLESFKVIFFERDVSMHIEFREELWKVLDCKAV-PPR 310
V+ YTT++ IR+T+ C++V+ +L + V F ERDV M +E++ E+ + + V P+
Sbjct: 307 VVLYTTSMGIIRETYTKCANVKQILRTLLVKFEERDVFMSVEYQAEMRQRMQSGQVRVPQ 366
Query: 311 LFIKGRYIGGAAEVLTLHEQGKLRPLFDGIPIDRSDGPCDGCAGVRFVLCFRCCGSHKVV 370
L+++G++IG A V ++E G+LR L S C C G R + C C GS K V
Sbjct: 367 LYVEGQHIGDAETVERMNESGELRQLLKPYKSMASTYTCQTCGGYRLLPCPSCNGSKKSV 426
Query: 371 -----TGDGLASQCQECNENGLIICPYC 393
T + +A +C C+E GL+ C C
Sbjct: 427 HRNHFTAEFVALKCMNCDEVGLVKCHNC 454
>sp|Q9W4S1|GRCR2_DROME Glutaredoxin domain-containing cysteine-rich protein CG12206
OS=Drosophila melanogaster GN=CG12206 PE=2 SV=2
Length = 582
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 84/148 (56%), Gaps = 6/148 (4%)
Query: 252 VIFYTTTLRGIRKTFEDCSSVRFLLESFKVIFFERDVSMHIEFREELWKVLDCKAV-PPR 310
V+ YTT++ IR T+ C++V+ +L + + F ERD+ M +E+++E+ + + + + P+
Sbjct: 435 VVLYTTSMGIIRDTYAKCANVKKILRTLLIKFEERDIFMSVEYQQEMRERMQDETIRVPQ 494
Query: 311 LFIKGRYIGGAAEVLTLHEQGKLRPLFDGIPIDRSDGPCDGCAGVRFVLCFRCCGSHKVV 370
LF++G+ IG A V L+E G+LR L + C C G R + C C GS K +
Sbjct: 495 LFVEGQLIGDANIVERLNESGELRQLLRPYKSIATAYTCQTCGGYRMLPCPACNGSKKSM 554
Query: 371 -----TGDGLASQCQECNENGLIICPYC 393
T + +A +C C+E GLI CP C
Sbjct: 555 HRNHFTAEFVALKCMNCDEVGLIKCPNC 582
>sp|Q50H32|GRCR1_MOUSE Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus
musculus GN=Grxcr1 PE=1 SV=1
Length = 290
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 12/152 (7%)
Query: 252 VIFYTTTLRGIRKTFEDCSSVRFLLESFKVIFFERDVSMHIEFREELWKVLDCKAVP--- 308
V+ YTT LR +R TFE C VR + ++ +V F E++++++ ++ +EL + C+ V
Sbjct: 139 VVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGDYGKELDE--RCRRVSEAP 196
Query: 309 --PRLFIKGRYIGGAAEVLTLHEQGKLRPLFDGIPIDRSDGPCDGCAGVRFVLCFRCCGS 366
P +FI G Y+GGA ++L+++E G+L+ L I + C C G F+ C C GS
Sbjct: 197 SLPVVFIDGHYLGGAEKILSMNESGELQDLLTKIERVQHPHECPSCGGFGFLPCSVCHGS 256
Query: 367 HKVV-----TGDGLASQCQECNENGLIICPYC 393
V T A +C CNENGL C C
Sbjct: 257 KMSVFRNCFTDAFKALKCTACNENGLQRCKNC 288
>sp|A8MXD5|GRCR1_HUMAN Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo
sapiens GN=GRXCR1 PE=1 SV=1
Length = 290
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 12/152 (7%)
Query: 252 VIFYTTTLRGIRKTFEDCSSVRFLLESFKVIFFERDVSMHIEFREELWKVLDCKAVP--- 308
V+ YTT LR +R TFE C VR + ++ +V F E++++++ E+ +EL + C+ V
Sbjct: 139 VVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGEYGKELDE--RCRRVSEAP 196
Query: 309 --PRLFIKGRYIGGAAEVLTLHEQGKLRPLFDGIPIDRSDGPCDGCAGVRFVLCFRCCGS 366
P +FI G Y+GGA ++L+++E G+L+ + I + C C G F+ C C GS
Sbjct: 197 SLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHECPSCGGFGFLPCSVCHGS 256
Query: 367 -----HKVVTGDGLASQCQECNENGLIICPYC 393
T A +C CNENGL C C
Sbjct: 257 KMSMFRNCFTDSFKALKCTACNENGLQRCKNC 288
>sp|Q6AXW1|GLRX2_RAT Glutaredoxin-2, mitochondrial OS=Rattus norvegicus GN=Glrx2 PE=2
SV=2
Length = 157
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 293 EFREELWKVLDCKAVPPRLFIKGRYIGGAAEVLTLHEQGKLRPLFDGIPIDRS 345
+F+E L+K+ + VP R+F+ G +IGGAA+ LH++GKL PL +++S
Sbjct: 100 QFQEALYKMTGERTVP-RIFVNGIFIGGAADTHRLHKEGKLLPLVHQCYLNKS 151
>sp|Q9L7Q2|ZMPB_STRPN Zinc metalloprotease ZmpB OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=zmpB PE=3 SV=2
Length = 1906
Score = 38.9 bits (89), Expect = 0.062, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 30/207 (14%)
Query: 46 KFQQTQMESKRSEQEK------KISERIEEIEEPDIIDVEELMKDLEDEEEEEEEEEAEE 99
K +++ E +SE + K+ E E+ EP VEE+ ++E + EE+ + E
Sbjct: 209 KTEESPKEEPKSEVKPTDDTLPKVEEGKEDSAEP--APVEEVGGEVESKPEEKVAVKPES 266
Query: 100 MELDDGINDK--ENIGPPTKPKDSVSC-----NSKENVELSKKVEPLAEIDVSSFRRPDM 152
D + E G P P++ E E K VE + + S+ PD
Sbjct: 267 QPSDKPAEESKVEQAGEPVAPREDEKAPVEPEKQPEAPEEEKAVEETPKQEEST---PDT 323
Query: 153 NSGTLFDPNLLAAFEEAVNQHIRLSQEERKARIDQEKNTEETERDATIEQVD--VEKLEE 210
+ +P EE VNQ I + E A EK TE TE + +EQ V E+
Sbjct: 324 KAEETVEPK-----EETVNQSIEQPKVETPA---VEKQTEPTE-EPKVEQAGEPVAPRED 374
Query: 211 EEEPEPPYK-SRRIQKEEEEEGEESNP 236
E+ P P + ++ + EEE+ E P
Sbjct: 375 EQAPTAPVEPEKQPEVPEEEKAVEETP 401
Score = 34.7 bits (78), Expect = 1.4, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 15/174 (8%)
Query: 67 IEEIEEPDIIDVEELMKDLED--EEEEEEEEEAEEMELDDGINDKENIGPPTKPKDSVSC 124
+ E+E P I +E + E EE +EEA + E + KE KP D
Sbjct: 175 VVEVETPQSITNQEQARTENQVVETEEAPKEEAPKTEE----SPKEEPKSEVKPTDDTLP 230
Query: 125 NSKENVELSKKVEPLAEIDVSSFRRPDMNSGTLFD--PNLLAAFEEAVNQ--HIRLSQEE 180
+E E S + P+ E+ +P+ + P+ A E V Q +E+
Sbjct: 231 KVEEGKEDSAEPAPVEEVGGEVESKPEEKVAVKPESQPSDKPAEESKVEQAGEPVAPRED 290
Query: 181 RKARIDQEKNTEETERDATIEQVDVEKLEEEEEPEPPYKSRRIQKEEEEEGEES 234
KA ++ EK E E E+ VE+ ++EE P K+ + +EE +S
Sbjct: 291 EKAPVEPEKQPEAPE-----EEKAVEETPKQEESTPDTKAEETVEPKEETVNQS 339
Score = 32.0 bits (71), Expect = 8.5, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 4/165 (2%)
Query: 74 DIIDVEELMKDLEDEEEEEEEEEAEEMELDDGINDKENIGPPTKPKDSVSCNSKE--NVE 131
DI+ L LE+ + E E+E I ++E + ++ +E E
Sbjct: 152 DILKTLGLDTVLEETSAKPGEVTVVEVETPQSITNQEQARTENQVVETEEAPKEEAPKTE 211
Query: 132 LSKKVEPLAEIDVSSFRRPDMNSGTLFDPNLLAAFEEAVNQHIRLSQEERKARIDQEKNT 191
S K EP +E+ + P + G + + A E V + EE+ A + + +
Sbjct: 212 ESPKEEPKSEVKPTDDTLPKVEEGK--EDSAEPAPVEEVGGEVESKPEEKVAVKPESQPS 269
Query: 192 EETERDATIEQVDVEKLEEEEEPEPPYKSRRIQKEEEEEGEESNP 236
++ ++ +EQ E+E P ++ + EEE+ E P
Sbjct: 270 DKPAEESKVEQAGEPVAPREDEKAPVEPEKQPEAPEEEKAVEETP 314
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 157,960,209
Number of Sequences: 539616
Number of extensions: 7604360
Number of successful extensions: 109508
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 2181
Number of HSP's that attempted gapping in prelim test: 62832
Number of HSP's gapped (non-prelim): 23289
length of query: 394
length of database: 191,569,459
effective HSP length: 119
effective length of query: 275
effective length of database: 127,355,155
effective search space: 35022667625
effective search space used: 35022667625
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)