BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 039222
         (659 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3ZX0|A Chain A, Ntpdase1 In Complex With Heptamolybdate
 pdb|3ZX0|B Chain B, Ntpdase1 In Complex With Heptamolybdate
 pdb|3ZX0|C Chain C, Ntpdase1 In Complex With Heptamolybdate
 pdb|3ZX0|D Chain D, Ntpdase1 In Complex With Heptamolybdate
 pdb|3ZX2|A Chain A, Ntpdase1 In Complex With Decavanadate
 pdb|3ZX2|B Chain B, Ntpdase1 In Complex With Decavanadate
 pdb|3ZX2|C Chain C, Ntpdase1 In Complex With Decavanadate
 pdb|3ZX2|D Chain D, Ntpdase1 In Complex With Decavanadate
          Length = 452

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 165/376 (43%), Gaps = 50/376 (13%)

Query: 113 AAIKPLLQWAEKQIPEHAHKTTSLFIYATAGVR--RLPTSDSKWLLDNAWSILKKNSPFL 170
           A +   ++ + ++IP      T +++ ATAG+R  R+ +  S   +  A S   K+ PF 
Sbjct: 89  AYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFD 148

Query: 171 CQRDWVKIISGTEEAYYGWTALNYRTGMLGAIPKKETFGSLDLGGSSLQVTFESKEHMHN 230
            Q    KII+G EE  YGW  +NY  G     P   TFG+LDLGGSS Q+TF        
Sbjct: 149 FQG--AKIITGQEEGAYGWITINYLLGRF-KTPGGSTFGALDLGGSSTQITFVPLNSTLE 205

Query: 231 --ETNLNLRIGAVNHHLSAYSLSGYGLNDAFDKSVVKLLKRIPNVTTSDLVNGKVEIKHP 288
             ET+L  R+   ++ +  +S   YG     D+++ + L +   V++  +      +K P
Sbjct: 206 APETSLQFRLYGTDYTVYTHSFLCYGK----DQALWQKLAQDIQVSSGGI------LKDP 255

Query: 289 CLQSGYKEQYVCSHCASSPAENGSPXXXXXXXXXXRKSGTTVQLTGAPNWEECSALAKTV 348
           C   GYK+    S    +P                +      Q+ G  ++E+C      +
Sbjct: 256 CFYPGYKKVVNVSELYGTPCTK---------RFEKKLPFNQFQVQGTGDYEQCHQSILKI 306

Query: 349 VNLSEWLNISPGVDCDMQPCALPDG--LPRPFGQFYAISGFFVVYRFFNLTSEASL---D 403
            N S          C    CA  +G  LP   G F A S F+ V  FF   +  S+   +
Sbjct: 307 FNNSH---------CPYSQCAF-NGVFLPPLQGSFGAFSAFYFVMDFFKKMANDSVSSQE 356

Query: 404 DVLEKGREFCEKTWDIARVSVP--PQPFIEQYCFRSPYVVLLLREGLHIT----DKNIIV 457
            + E  + FC K W+  + S P   + ++ +YCF   Y++ LL +G + T    D+   +
Sbjct: 357 KMTEITKNFCSKPWEEVKASYPTVKEKYLSEYCFSGTYILSLLLQGYNFTGTSWDQIHFM 416

Query: 458 G---SGSITWTLGVAL 470
           G     +  WTLG  L
Sbjct: 417 GKIKDSNAGWTLGYML 432


>pdb|3ZX3|A Chain A, Crystal Structure And Domain Rotation Of Ntpdase1 Cd39
 pdb|3ZX3|B Chain B, Crystal Structure And Domain Rotation Of Ntpdase1 Cd39
 pdb|3ZX3|C Chain C, Crystal Structure And Domain Rotation Of Ntpdase1 Cd39
 pdb|3ZX3|D Chain D, Crystal Structure And Domain Rotation Of Ntpdase1 Cd39
          Length = 452

 Score =  113 bits (282), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 165/376 (43%), Gaps = 50/376 (13%)

Query: 113 AAIKPLLQWAEKQIPEHAHKTTSLFIYATAGVR--RLPTSDSKWLLDNAWSILKKNSPFL 170
           A +   ++ + ++IP      T +++ ATAG+R  R+ +  S   +  A S   K+ PF 
Sbjct: 89  AYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFD 148

Query: 171 CQRDWVKIISGTEEAYYGWTALNYRTGMLGAIPKKETFGSLDLGGSSLQVTFESKEHMHN 230
            Q    KII+G EE  YGW  +NY  G     P   TFG+LDLGG+S Q+TF        
Sbjct: 149 FQG--AKIITGQEEGAYGWITINYLLGRF-KTPGGSTFGALDLGGASTQITFVPLNSTLE 205

Query: 231 --ETNLNLRIGAVNHHLSAYSLSGYGLNDAFDKSVVKLLKRIPNVTTSDLVNGKVEIKHP 288
             ET+L  R+   ++ +  +S   YG     D+++ + L +   V++  +      +K P
Sbjct: 206 APETSLQFRLYGTDYTVYTHSFLCYGK----DQALWQKLAQDIQVSSGGI------LKDP 255

Query: 289 CLQSGYKEQYVCSHCASSPAENGSPXXXXXXXXXXRKSGTTVQLTGAPNWEECSALAKTV 348
           C   GYK+    S    +P                +      Q+ G  ++E+C      +
Sbjct: 256 CFYPGYKKVVNVSELYGTPCTK---------RFEKKLPFNQFQVQGTGDYEQCHQSILKI 306

Query: 349 VNLSEWLNISPGVDCDMQPCALPDG--LPRPFGQFYAISGFFVVYRFFNLTSEASL---D 403
            N S          C    CA  +G  LP   G F A S F+ V  FF   +  S+   +
Sbjct: 307 FNNSH---------CPYSQCAF-NGVFLPPLQGSFGAFSAFYFVMDFFKKMANDSVSSQE 356

Query: 404 DVLEKGREFCEKTWDIARVSVP--PQPFIEQYCFRSPYVVLLLREGLHIT----DKNIIV 457
            + E  + FC K W+  + S P   + ++ +YCF   Y++ LL +G + T    D+   +
Sbjct: 357 KMTEITKNFCSKPWEEVKASYPTVKEKYLSEYCFSGTYILSLLLQGYNFTGTSWDQIHFM 416

Query: 458 G---SGSITWTLGVAL 470
           G     +  WTLG  L
Sbjct: 417 GKIKDSNAGWTLGYML 432


>pdb|3CJ1|A Chain A, Structure Of Rattus Norvegicus Ntpdase2
 pdb|3CJ7|A Chain A, Structure Of Rattus Norvegicus Ntpdase2 In Complex With
           Amp
 pdb|3CJ9|A Chain A, Structure Of Rattus Norvegicus Ntpdase2 In Complex With
           Calcium, Amp And Phosphate
 pdb|3CJA|A Chain A, Structure Of Rattus Norvegicus Ntpdase2 In Complex With
           Calcium And Amppnp
          Length = 456

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 155/374 (41%), Gaps = 53/374 (14%)

Query: 119 LQWAEKQIPEHAHKTTSLFIYATAGVRRLPTSDSKWLLDNAWSILKKNSPFLCQRDWVKI 178
           L+ A + +P   H +T L++ ATAG+R L  +  +       ++ +  + +       +I
Sbjct: 95  LEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARI 154

Query: 179 ISGTEEAYYGWTALNY------RTGMLG--AIPKKETFGSLDLGGSSLQVTFESKEHMHN 230
           +SG +E  +GW   NY      + G +G    P+K T G++DLGG+S Q+TFE+     +
Sbjct: 155 LSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFETTSPSED 214

Query: 231 ETN-LNLRIGAVNHHLSAYSLSGYGLNDAFDKSVVKLLKRIPNVTTSDLVNGKVEIKHPC 289
             N ++LR+   ++ +  +S   YG     D+ +++LL        S L   ++   HPC
Sbjct: 215 PGNEVHLRLYGQHYRVYTHSFLCYGR----DQILLRLL-------ASAL---QIHRFHPC 260

Query: 290 LQSGYKEQYVCSHCASSPAENGSPXXXXXXXXXXRKSGTTVQLTGAPNWEECSALAKTVV 349
              GY  Q +      SP   G                  V L+G  N   C  L   + 
Sbjct: 261 WPKGYSTQVLLQEVYQSPCTMGQRPRAF-------NGSAIVSLSGTSNATLCRDLVSRLF 313

Query: 350 NLSEWLNISPGVDCDMQPCALPDGLPRP--FGQFYAISGFFVVYRFFNLTSEASLDDV-- 405
           N+S          C    C+  +G+ +P   G F A S F+    F        +  +  
Sbjct: 314 NISS---------CPFSQCSF-NGVFQPPVAGNFIAFSAFYYTVDFLTTVMGLPVGTLKQ 363

Query: 406 LEKGREF-CEKTWDIARVSVPPQPF-IEQYCFRSPYVVLLLREGLHITDKNI-------I 456
           LE+  E  C +TW   +  VP Q   +  YC  + ++  LL  G H  +++         
Sbjct: 364 LEEATEITCNQTWTELQARVPGQKTRLADYCAVAMFIHQLLSRGYHFDERSFREVVFQKK 423

Query: 457 VGSGSITWTLGVAL 470
               ++ W LG  L
Sbjct: 424 AADTAVGWALGYML 437


>pdb|3AAP|A Chain A, Crystal Structure Of Lp1ntpdase From Legionella
           Pneumophila
 pdb|3AAQ|A Chain A, Crystal Structure Of Lp1ntpdase From Legionella
           Pneumophila In Complex With The Inhibitor Arl 67156
 pdb|3AAR|A Chain A, Crystal Structure Of Lp1ntpdase From Legionella
           Pneumophila In Complex With Amppnp
          Length = 353

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 141/350 (40%), Gaps = 81/350 (23%)

Query: 136 LFIYATAGVRRLPTSDSKWLLDNAWSILKKNSPFLCQRDWVKIISGTEEAYYGWTALNYR 195
           ++ YATAG+R LP S  K   D      ++ S +  Q    K I+G +EA + W A+NY+
Sbjct: 73  VYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQW--QLVEAKTITGNDEALFDWLAVNYK 130

Query: 196 TGMLGAIPKKETFGSLDLGGSSLQVTF----ESKEHMHNETNLNLRIGAVNHHLSAYSLS 251
              L ++  K + G +D+GG+S+Q+ F     ++   HN+  LN+       +++ Y  S
Sbjct: 131 LDTLKSVQNK-SVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIY----GQNINLYVHS 185

Query: 252 GYGLNDAFDKSVVKLLKRIPNVTTSDLVNGKVEIKHPCLQSGYKEQYVCSHCASSPAENG 311
             GL                         G+ E+ H  L S             S   N 
Sbjct: 186 FLGL-------------------------GQTEMSHQFLNS------------PSCFAND 208

Query: 312 SPXXXXXXXXXXRKSGTTVQLTGAPNWEECSALAKTVVNLSEWLNISPGVDCDMQPC-AL 370
            P             G + Q       EE ++L  +V  +++           +QP  AL
Sbjct: 209 YPL----------PDGESGQGNAPSCKEEVTSLMNSVHKVNQ----------QIQPLLAL 248

Query: 371 PDGLPRPFGQFYAISGF--FVVYRFFNL-TSEASLDDVLEKG-REFCEKTWDIARVSVPP 426
                 P  ++Y+I G       + F+   SE +   +L++G  + C + WDI     P 
Sbjct: 249 -----NPVNEWYSIGGISNLASSQLFHFENSELTNQSLLQQGDNQICHQQWDILNGQYPD 303

Query: 427 QPFIEQYCFRSPYVVLLLREGLHITDK---NIIVGSGSITWTLGVALLEA 473
             ++ QYC  S Y   L+ +G  I      + I    ++ WT+GV L  A
Sbjct: 304 DEYLYQYCLLSSYYYALMVDGYGINPNQTIHYIPPEQNLDWTIGVVLHRA 353


>pdb|3AGR|A Chain A, Crystal Structure Of Nucleoside Triphosphate Hydrolases
           From Neospora Caninum
 pdb|3AGR|B Chain B, Crystal Structure Of Nucleoside Triphosphate Hydrolases
           From Neospora Caninum
          Length = 602

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 39/187 (20%)

Query: 136 LFIYATAGVRRLPTSDSKWLLDNAWSILK--KNSP-------FLCQRDWVKIISGTEEAY 186
           + + +TAGVR        W  +  + IL+   N P       F    +W + I+G EE  
Sbjct: 159 VLLCSTAGVRDF----HDWYREALFVILRFLINHPKPGHGYKFFTNPEWTRPITGAEEGL 214

Query: 187 YGWTALNYRTGMLGAIP-------------KKETFGSLDLGGSSLQVTFESKEHMHNETN 233
           Y + ALN+ +G LG  P             + +  G +++GG+S Q+ F     + + T 
Sbjct: 215 YAFLALNHLSGRLGEDPARCYVDEYGMKQCRNDLVGVVEVGGASTQIVFP----LQDGTA 270

Query: 234 LNLRIGAVNHHLSAYSLSGYGLNDAFDKSVVKLLKRIPNVTTSDLVNGKVEIKHPCLQSG 293
           L   I AVN     +  S +   D    S ++L      V +S      +  K  C  + 
Sbjct: 271 LPSSIRAVNLQHERFLPSRFPSADVISVSFMQL-----GVASS----SGLFFKELCSNAE 321

Query: 294 YKEQYVC 300
           ++ Q +C
Sbjct: 322 FRHQGIC 328


>pdb|4A57|A Chain A, Crystal Structure Of Toxoplasma Gondii Nucleoside
           Triphosphate Diphosphohydrolase 3 (Ntpdase3)
 pdb|4A57|B Chain B, Crystal Structure Of Toxoplasma Gondii Nucleoside
           Triphosphate Diphosphohydrolase 3 (Ntpdase3)
 pdb|4A57|C Chain C, Crystal Structure Of Toxoplasma Gondii Nucleoside
           Triphosphate Diphosphohydrolase 3 (Ntpdase3)
 pdb|4A57|D Chain D, Crystal Structure Of Toxoplasma Gondii Nucleoside
           Triphosphate Diphosphohydrolase 3 (Ntpdase3)
 pdb|4A59|A Chain A, Crystal Structure Of Toxoplasma Gondii Nucleoside
           Triphosphate Diphosphohydrolase 3 (Ntpdase3) In Complex
           With Amp
 pdb|4A59|B Chain B, Crystal Structure Of Toxoplasma Gondii Nucleoside
           Triphosphate Diphosphohydrolase 3 (Ntpdase3) In Complex
           With Amp
 pdb|4A59|C Chain C, Crystal Structure Of Toxoplasma Gondii Nucleoside
           Triphosphate Diphosphohydrolase 3 (Ntpdase3) In Complex
           With Amp
 pdb|4A59|D Chain D, Crystal Structure Of Toxoplasma Gondii Nucleoside
           Triphosphate Diphosphohydrolase 3 (Ntpdase3) In Complex
           With Amp
          Length = 611

 Score = 39.7 bits (91), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 42/208 (20%)

Query: 120 QWAEKQIPEHAHKTTSLFIYATAGVRRLPTSDSKWLLDNAWSILKK--NSP-------FL 170
           Q  EKQ  +       + + +TAGVR       +W  D  + +L+   N+P       F 
Sbjct: 143 QLNEKQKVQVKALGIPVMLCSTAGVRDF----HEWYRDALFVLLRHLINNPSPAHGYKFF 198

Query: 171 CQRDWVKIISGTEEAYYGWTALNYRTGMLGAIP-------------KKETFGSLDLGGSS 217
               W + I+G EE  + +  LN+ +  LG  P             + +  G +++GG+S
Sbjct: 199 TNPFWTRPITGAEEGLFAFITLNHLSRRLGEDPARCMIDEYGVKQCRNDLAGVVEVGGAS 258

Query: 218 LQVTFESKEHMHNETNLNLRIGAVNHHLSAYSLSGYGLNDAFDKSVVKL---------LK 268
            Q+ F  +E     T L   + AVN          Y   D    S ++L         LK
Sbjct: 259 AQIVFPLQEG----TVLPSSVRAVNLQRERLLPERYPSADVVSVSFMQLGMASSAGLFLK 314

Query: 269 RIPNVTTSDLVNGKVEIKHPCLQSGYKE 296
            +   +  + + G +   +PCL  G+++
Sbjct: 315 EL--CSNDEFLQGGI-CSNPCLFKGFQQ 339


>pdb|4A5A|A Chain A, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
           GONDII Nucleoside Triphosphate Diphosphohydrolase 3
           (Ntpdase3) In Complex With Magnesium And Amppnp
 pdb|4A5A|B Chain B, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
           GONDII Nucleoside Triphosphate Diphosphohydrolase 3
           (Ntpdase3) In Complex With Magnesium And Amppnp
 pdb|4A5A|C Chain C, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
           GONDII Nucleoside Triphosphate Diphosphohydrolase 3
           (Ntpdase3) In Complex With Magnesium And Amppnp
 pdb|4A5A|D Chain D, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
           GONDII Nucleoside Triphosphate Diphosphohydrolase 3
           (Ntpdase3) In Complex With Magnesium And Amppnp
          Length = 611

 Score = 39.7 bits (91), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 26/129 (20%)

Query: 120 QWAEKQIPEHAHKTTSLFIYATAGVRRLPTSDSKWLLDNAWSILKK--NSP-------FL 170
           Q  EKQ  +       + + +TAGVR       +W  D  + +L+   N+P       F 
Sbjct: 143 QLNEKQKVQVKALGIPVMLCSTAGVRDF----HEWYRDALFVLLRHLINNPSPAHGYKFF 198

Query: 171 CQRDWVKIISGTEEAYYGWTALNYRTGMLGAIP-------------KKETFGSLDLGGSS 217
               W + I+G EE  + +  LN+ +  LG  P             + +  G +++GG+S
Sbjct: 199 TNPFWTRPITGAEEGLFAFITLNHLSRRLGEDPARSMIDEYGVKQSRNDLAGVVEVGGAS 258

Query: 218 LQVTFESKE 226
            Q+ F  +E
Sbjct: 259 AQIVFPLQE 267


>pdb|4A5B|A Chain A, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
           GONDII Nucleoside Triphosphate Diphosphohydrolase 1
           (Ntpdase1)
 pdb|4A5B|B Chain B, Crystal Structure Of The C258sC268S VARIANT OF TOXOPLASMA
           GONDII Nucleoside Triphosphate Diphosphohydrolase 1
           (Ntpdase1)
          Length = 611

 Score = 38.1 bits (87), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 42/192 (21%)

Query: 136 LFIYATAGVRRLPTSDSKWLLDNAWSILKK--NSP-------FLCQRDWVKIISGTEEAY 186
           + + +TAGVR       +W  D  + +L+   N+P       F     W + I+G EE  
Sbjct: 159 VMLCSTAGVRDF----HEWYRDALFVLLRHLINNPSPAHGYKFFTNPFWTRPITGAEEGL 214

Query: 187 YGWTALNYRTGMLGAIP-------------KKETFGSLDLGGSSLQVTFESKEHMHNETN 233
           + +  LN+ +  LG  P             + +  G +++GG+S Q+ F  +E     T 
Sbjct: 215 FAFITLNHLSRRLGEDPARSMIDEYGVKHSRNDLAGVVEVGGASAQIVFPLQEG----TV 270

Query: 234 LNLRIGAVNHHLSAYSLSGYGLNDAFDKSVVKL---------LKRIPNVTTSDLVNGKVE 284
           L   + AVN          Y   D    S ++L         LK +   +  + + G + 
Sbjct: 271 LPSSVRAVNLQRERLLPERYPSADVVSVSFMQLGMASSAGLFLKEL--CSNDEFLQGGI- 327

Query: 285 IKHPCLQSGYKE 296
             +PCL  G+++
Sbjct: 328 CSNPCLFKGFQQ 339


>pdb|2GNW|A Chain A, Crystal Structure Of Non-Symbiotic Plant Hemoglobin From
           Rice, B10 Mutant F40w
 pdb|2GNW|B Chain B, Crystal Structure Of Non-Symbiotic Plant Hemoglobin From
           Rice, B10 Mutant F40w
          Length = 165

 Score = 31.2 bits (69), Expect = 2.0,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 15/151 (9%)

Query: 149 TSDSKWLLDNAWSILKKNSPFLCQRDWVKIISGTEEAYYGWTALNYRTGMLGAIPKKETF 208
           + + + L+  +W+ILKK+S  +  R W+KI      A   ++ L      L   PK +T 
Sbjct: 14  SEEQEALVLKSWAILKKDSANIALRFWLKIFEVAPSASQMFSFLRNSDVPLEKNPKLKTH 73

Query: 209 GSLDLGGSSLQVTFESKEHMHNETNLNLRIGAVNHHLSAYSLSGYGLNDA-FDKSVVKLL 267
                  S   +T E+   +     + +R   +   L A  L  YG+ DA F+     LL
Sbjct: 74  AM-----SVFVMTCEAAAQLRKAGKVTVRDTTLK-RLGATHLK-YGVGDAHFEVVKFALL 126

Query: 268 KRIPNVTTSDLVNGKVEIKHPCLQSGYKEQY 298
             I     +D+ +       P ++S + E Y
Sbjct: 127 DTIKEEVPADMWS-------PAMKSAWSEAY 150


>pdb|1NTL|A Chain A, Model Of Mouse Crry-Ig Determined By Solution Scattering,
           Curve Fitting And Homology Modelling
 pdb|1NTL|B Chain B, Model Of Mouse Crry-Ig Determined By Solution Scattering,
           Curve Fitting And Homology Modelling
          Length = 551

 Score = 29.3 bits (64), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 36/94 (38%), Gaps = 26/94 (27%)

Query: 363 CDMQPCALPDGLPRPFGQFYAIS------GFFVVYR---------FFNLTSEASLDDVLE 407
           C+  PC +P G+P   G F++ +      G  V YR          FNL  E SL     
Sbjct: 121 CEWIPCEIPPGIPN--GDFFSSTREDFHYGMVVTYRCNTDARGKALFNLVGEPSLYCTSN 178

Query: 408 KGREFCEKTWDIARVSVPPQPFIE-QYCFRSPYV 440
            G        +I   S PP   IE   C   PYV
Sbjct: 179 DG--------EIGVWSGPPPQCIELNKCTPPPYV 204


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.318    0.133    0.408 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,278,975
Number of Sequences: 62578
Number of extensions: 798010
Number of successful extensions: 1812
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1788
Number of HSP's gapped (non-prelim): 13
length of query: 659
length of database: 14,973,337
effective HSP length: 105
effective length of query: 554
effective length of database: 8,402,647
effective search space: 4655066438
effective search space used: 4655066438
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)