BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039224
(179 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255556685|ref|XP_002519376.1| conserved hypothetical protein [Ricinus communis]
gi|223541443|gb|EEF42993.1| conserved hypothetical protein [Ricinus communis]
Length = 303
Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 135/170 (79%), Positives = 157/170 (92%), Gaps = 1/170 (0%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYRFFSY-IYNTNQGIDNAVPVLLVDGYNVCGYWPKLE 60
P+P+TSYR+KKV+KE+LPEDTELYR + +Y TNQ ID+AVPVLLVDGYNVCGYWPKL+
Sbjct: 83 PKPATSYRKKKVQKEDLPEDTELYRDPTLSLYYTNQVIDDAVPVLLVDGYNVCGYWPKLK 142
Query: 61 NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETC 120
HF+ GRLD+ARQKLI+EL+ FSM+REVKVV VFDA+MSGLPTHKE FIG+D+VF GE+C
Sbjct: 143 KHFMNGRLDIARQKLIDELITFSMLREVKVVAVFDAMMSGLPTHKETFIGIDVVFSGESC 202
Query: 121 ADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
ADAWIEKE+VALREDGCPKVWVVTSD +QQHAA+GAGAFVWSSKALVSE+
Sbjct: 203 ADAWIEKEVVALREDGCPKVWVVTSDRMQQHAAHGAGAFVWSSKALVSEI 252
>gi|118488713|gb|ABK96167.1| unknown [Populus trichocarpa]
Length = 297
Score = 285 bits (729), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 131/170 (77%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYRFFSY-IYNTNQGIDNAVPVLLVDGYNVCGYWPKLE 60
P+PSTSYRRKKVEKE+LPEDTELYR + +Y TNQ ++ VPVLLVDGYNVCGYW KL+
Sbjct: 77 PKPSTSYRRKKVEKEDLPEDTELYRDPTLSLYYTNQIVETGVPVLLVDGYNVCGYWAKLK 136
Query: 61 NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETC 120
HF+ GRLD+ARQKLI+ELV FS+ R+VKVVVVFDA+MSGLPTHKE F GVD++F GE+C
Sbjct: 137 KHFVNGRLDIARQKLIDELVAFSLARDVKVVVVFDAMMSGLPTHKENFAGVDVIFTGESC 196
Query: 121 ADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
ADAWIEKE+VAL+EDGCPKVWVVTSDH+ QHAA+GAGAF+WS KALVSEV
Sbjct: 197 ADAWIEKEVVALKEDGCPKVWVVTSDHIHQHAAHGAGAFIWSCKALVSEV 246
>gi|225465306|ref|XP_002269195.1| PREDICTED: uncharacterized protein LOC100265963 [Vitis vinifera]
gi|297739435|emb|CBI29617.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 285 bits (728), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 131/170 (77%), Positives = 153/170 (90%), Gaps = 1/170 (0%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYRFFS-YIYNTNQGIDNAVPVLLVDGYNVCGYWPKLE 60
P+P+TSYRRKKV+K++LPEDTELY + +Y TNQGID AVPVLLVDGYNVCGYW KL+
Sbjct: 64 PKPATSYRRKKVQKDDLPEDTELYHDPTVTLYYTNQGIDTAVPVLLVDGYNVCGYWMKLK 123
Query: 61 NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETC 120
HF+ GRLD+ARQKLI+ELV FS++REVKVVVVFDA+MSGLPTHKE F G+D+V+ GE+C
Sbjct: 124 KHFVNGRLDIARQKLIDELVTFSLLREVKVVVVFDAMMSGLPTHKENFAGIDVVYSGESC 183
Query: 121 ADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
ADAWIEKE+VALREDGCPKVWVVTSD+ QQ AA+GAGAFVWS KALVSE+
Sbjct: 184 ADAWIEKEVVALREDGCPKVWVVTSDNCQQQAAHGAGAFVWSCKALVSEI 233
>gi|224070772|ref|XP_002303229.1| predicted protein [Populus trichocarpa]
gi|222840661|gb|EEE78208.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 131/170 (77%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYRFFSY-IYNTNQGIDNAVPVLLVDGYNVCGYWPKLE 60
P+PSTSYRRKKVEKE+LPEDTELYR + +Y TNQ ++ VPVLLVDGYNVCGYW KL+
Sbjct: 33 PKPSTSYRRKKVEKEDLPEDTELYRDPTLSLYYTNQIVETGVPVLLVDGYNVCGYWAKLK 92
Query: 61 NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETC 120
HF+ GRLD+ARQKLI+ELV FS+ R+VKVVVVFDA+MSGLPTHKE F GVD++F GE+C
Sbjct: 93 KHFVNGRLDIARQKLIDELVAFSLARDVKVVVVFDAIMSGLPTHKENFAGVDVIFTGESC 152
Query: 121 ADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
ADAWIEKE+VAL+EDGCPKVWVVTSDH+ QHAA+GAGAF+WS KALVSEV
Sbjct: 153 ADAWIEKEVVALKEDGCPKVWVVTSDHIHQHAAHGAGAFIWSCKALVSEV 202
>gi|449431908|ref|XP_004133742.1| PREDICTED: uncharacterized protein LOC101212837 [Cucumis sativus]
Length = 304
Score = 281 bits (719), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 153/172 (88%), Gaps = 1/172 (0%)
Query: 1 MPRPSTSYRRKKVEKEELPEDTELYRFFSY-IYNTNQGIDNAVPVLLVDGYNVCGYWPKL 59
+P+P+TSYRRKKVEKE+LPEDTELYR + +Y+TNQGIDN PVLLVDGYNVCGYW KL
Sbjct: 85 VPKPATSYRRKKVEKEDLPEDTELYRDPTLALYHTNQGIDNVFPVLLVDGYNVCGYWVKL 144
Query: 60 ENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGET 119
+ HF+ GRLDVARQKLI+EL+ FSM+REVKVVVVFDA++SGLPTHKE F G+D+V+ GE+
Sbjct: 145 KKHFMNGRLDVARQKLIDELITFSMLREVKVVVVFDAMLSGLPTHKENFAGIDVVYSGES 204
Query: 120 CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEVS 171
CAD WIE E+VAL+EDGCPKVWVVTSD QHAA+GAGAF+WS KALVSE++
Sbjct: 205 CADTWIETEVVALKEDGCPKVWVVTSDVCHQHAAHGAGAFIWSCKALVSEIN 256
>gi|449525788|ref|XP_004169898.1| PREDICTED: uncharacterized protein LOC101230835, partial [Cucumis
sativus]
Length = 259
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 129/170 (75%), Positives = 151/170 (88%), Gaps = 1/170 (0%)
Query: 1 MPRPSTSYRRKKVEKEELPEDTELYRFFSY-IYNTNQGIDNAVPVLLVDGYNVCGYWPKL 59
+P+P+TSYRRKKVEKE+LPEDTELYR + +Y+TNQGIDN PVLLVDGYNVCGYW KL
Sbjct: 90 VPKPATSYRRKKVEKEDLPEDTELYRDPTLALYHTNQGIDNVFPVLLVDGYNVCGYWVKL 149
Query: 60 ENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGET 119
+ HF+ GRLDVARQKLI+EL+ FSM+REVKVVVVFDA++SGLPTHKE F G+D+V+ GE+
Sbjct: 150 KKHFMNGRLDVARQKLIDELITFSMLREVKVVVVFDAMLSGLPTHKENFAGIDVVYSGES 209
Query: 120 CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSE 169
CAD WIE E+VAL+EDGCPKVWVVTSD QHAA+GAGAF+WS KALVSE
Sbjct: 210 CADTWIETEVVALKEDGCPKVWVVTSDVCHQHAAHGAGAFIWSCKALVSE 259
>gi|356522105|ref|XP_003529690.1| PREDICTED: uncharacterized protein LOC100804585 [Glycine max]
Length = 286
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/172 (74%), Positives = 148/172 (86%), Gaps = 3/172 (1%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYR--FFSYIYNTNQGI-DNAVPVLLVDGYNVCGYWPK 58
PRPSTSYR+KKVEKE+ DT+LYR S Y QGI DNAVPVLLVDGYNVCGYW K
Sbjct: 66 PRPSTSYRKKKVEKEDDVVDTDLYRDPTTSLYYTNQQGILDNAVPVLLVDGYNVCGYWMK 125
Query: 59 LENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGE 118
L+ HF+KGRLD+ARQKLI+EL+ FSM+REVK+VVVFDA+MSGLPTHKE+F G+DI+F GE
Sbjct: 126 LKKHFVKGRLDIARQKLIDELLTFSMLREVKIVVVFDAMMSGLPTHKEDFAGLDIIFSGE 185
Query: 119 TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
TCAD WIEKE+ AL+EDGCPKVWVVTSDH Q AA+GAGAF+WS KALV+E+
Sbjct: 186 TCADTWIEKEVAALKEDGCPKVWVVTSDHCHQQAAHGAGAFIWSCKALVTEI 237
>gi|334184110|ref|NP_001189501.1| uncharacterized protein [Arabidopsis thaliana]
gi|330250485|gb|AEC05579.1| uncharacterized protein [Arabidopsis thaliana]
Length = 243
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/172 (77%), Positives = 157/172 (91%), Gaps = 2/172 (1%)
Query: 1 MPRPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGI-DNAVPVLLVDGYNVCGYWPK 58
M +P+TSYR+KKVEK+ELP+D+ELYR + +Y TNQG+ D+AVPVLLVDGYNVCGYW K
Sbjct: 22 MAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMK 81
Query: 59 LENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGE 118
L+ HF+KGRLDVARQKL++ELV FSM++EVKVVVVFDALMSGLPTHKE+F GVD++F GE
Sbjct: 82 LKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGE 141
Query: 119 TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
TCADAWIEKE+VALREDGCPKVWVVTSD QQ AA+GAGA++WSSKALVSE+
Sbjct: 142 TCADAWIEKEVVALREDGCPKVWVVTSDVCQQQAAHGAGAYIWSSKALVSEI 193
>gi|30677998|ref|NP_178346.2| uncharacterized protein [Arabidopsis thaliana]
gi|26449562|dbj|BAC41907.1| unknown protein [Arabidopsis thaliana]
gi|28950879|gb|AAO63363.1| At2g02410 [Arabidopsis thaliana]
gi|330250483|gb|AEC05577.1| uncharacterized protein [Arabidopsis thaliana]
Length = 308
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/172 (77%), Positives = 157/172 (91%), Gaps = 2/172 (1%)
Query: 1 MPRPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGI-DNAVPVLLVDGYNVCGYWPK 58
M +P+TSYR+KKVEK+ELP+D+ELYR + +Y TNQG+ D+AVPVLLVDGYNVCGYW K
Sbjct: 87 MAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMK 146
Query: 59 LENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGE 118
L+ HF+KGRLDVARQKL++ELV FSM++EVKVVVVFDALMSGLPTHKE+F GVD++F GE
Sbjct: 147 LKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGE 206
Query: 119 TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
TCADAWIEKE+VALREDGCPKVWVVTSD QQ AA+GAGA++WSSKALVSE+
Sbjct: 207 TCADAWIEKEVVALREDGCPKVWVVTSDVCQQQAAHGAGAYIWSSKALVSEI 258
>gi|334184108|ref|NP_001189500.1| uncharacterized protein [Arabidopsis thaliana]
gi|330250484|gb|AEC05578.1| uncharacterized protein [Arabidopsis thaliana]
Length = 260
Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/172 (77%), Positives = 157/172 (91%), Gaps = 2/172 (1%)
Query: 1 MPRPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGI-DNAVPVLLVDGYNVCGYWPK 58
M +P+TSYR+KKVEK+ELP+D+ELYR + +Y TNQG+ D+AVPVLLVDGYNVCGYW K
Sbjct: 39 MAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMK 98
Query: 59 LENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGE 118
L+ HF+KGRLDVARQKL++ELV FSM++EVKVVVVFDALMSGLPTHKE+F GVD++F GE
Sbjct: 99 LKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGE 158
Query: 119 TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
TCADAWIEKE+VALREDGCPKVWVVTSD QQ AA+GAGA++WSSKALVSE+
Sbjct: 159 TCADAWIEKEVVALREDGCPKVWVVTSDVCQQQAAHGAGAYIWSSKALVSEI 210
>gi|297814482|ref|XP_002875124.1| hypothetical protein ARALYDRAFT_484159 [Arabidopsis lyrata subsp.
lyrata]
gi|297320962|gb|EFH51383.1| hypothetical protein ARALYDRAFT_484159 [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/172 (77%), Positives = 157/172 (91%), Gaps = 2/172 (1%)
Query: 1 MPRPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGI-DNAVPVLLVDGYNVCGYWPK 58
M +P+TSYR+KKVEK+ELP+D+ELYR + +Y TNQG+ D+AVPVLLVDGYNVCGYW K
Sbjct: 85 MAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMK 144
Query: 59 LENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGE 118
L+ HF+KGRLDVARQKL++ELV FSM++EVKVVVVFDALMSGLPTHKE+F GVD++F GE
Sbjct: 145 LKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGE 204
Query: 119 TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
TCADAWIEKE+VALREDGCPKVWVVTSD QQ AA+GAGA++WSSKALVSE+
Sbjct: 205 TCADAWIEKEVVALREDGCPKVWVVTSDVCQQQAAHGAGAYIWSSKALVSEI 256
>gi|388515497|gb|AFK45810.1| unknown [Lotus japonicus]
Length = 317
Score = 261 bits (667), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 123/174 (70%), Positives = 147/174 (84%), Gaps = 5/174 (2%)
Query: 2 PRPSTSYRRKKVEKEELPED--TELYRF-FSYIYNTNQG--IDNAVPVLLVDGYNVCGYW 56
PRPSTSYRRKKV+ +E ++ ++LYR + +Y TNQ IDNAVPVLLVDGYNVCGYW
Sbjct: 95 PRPSTSYRRKKVDDKEDADNHNSDLYRDPTTSLYYTNQEGLIDNAVPVLLVDGYNVCGYW 154
Query: 57 PKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFP 116
KL+ HF+ GRL +ARQKLI+EL+ FSM+REVKVV VFDA+MSGLPTHKE F G+D++F
Sbjct: 155 VKLKKHFMNGRLHIARQKLIDELITFSMLREVKVVAVFDAMMSGLPTHKENFAGIDVIFS 214
Query: 117 GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
GE+ AD WIEKE+ AL+EDGCPKVWVVTSDH QQHAA+GAGAFVWS KALV+E+
Sbjct: 215 GESSADTWIEKEVSALKEDGCPKVWVVTSDHCQQHAAHGAGAFVWSCKALVTEI 268
>gi|388517267|gb|AFK46695.1| unknown [Medicago truncatula]
Length = 277
Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 139/175 (79%), Gaps = 8/175 (4%)
Query: 2 PRPSTSYRRKKVEKEELPED-TELYRF-FSYIYNTNQG----IDNA--VPVLLVDGYNVC 53
PRPST YR+KK EKE+L +D T LYR + +Y TN IDNA VPVLLVDGYNVC
Sbjct: 102 PRPSTRYRKKKAEKEDLADDQTHLYRDPTTSLYRTNHQLGGLIDNAAAVPVLLVDGYNVC 161
Query: 54 GYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDI 113
GYW KL+ HF+ G+L++ARQKLI+EL+ FS++REVKVVVVFDA+MSG P HKE G+D+
Sbjct: 162 GYWLKLKKHFLNGKLELARQKLIDELITFSILREVKVVVVFDAMMSGFPNHKEYSSGIDV 221
Query: 114 VFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVS 168
VF + AD WIEKE+ AL+EDGCPKVWVVTSDH QQ AA+GAGAF WSSKALV+
Sbjct: 222 VFSADASADTWIEKEVSALKEDGCPKVWVVTSDHCQQQAAHGAGAFAWSSKALVT 276
>gi|356541693|ref|XP_003539308.1| PREDICTED: uncharacterized protein yacP-like [Glycine max]
Length = 187
Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 118/140 (84%), Gaps = 1/140 (0%)
Query: 31 IYNTNQGI-DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVK 89
+ QGI DNAVPVLLVDGYNVCGYW KL+ HF+KGRLD+A QKLI+EL+ FSM+REVK
Sbjct: 6 VSTNQQGILDNAVPVLLVDGYNVCGYWMKLKKHFVKGRLDIAHQKLIDELLTFSMLREVK 65
Query: 90 VVVVFDALMSGLPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQ 149
++VVF A+MSGLPTHKE+F G+DI+F GETC D WIEKE+ AL+EDGCPKVWVVTSDH
Sbjct: 66 IIVVFVAMMSGLPTHKEDFAGLDIIFSGETCVDTWIEKEVAALKEDGCPKVWVVTSDHCH 125
Query: 150 QHAAYGAGAFVWSSKALVSE 169
Q A+GAGAF+WS LV++
Sbjct: 126 QQVAHGAGAFIWSCMGLVTD 145
>gi|41469629|gb|AAS07352.1| expressed protein (with alternative splicing) [Oryza sativa
Japonica Group]
gi|222626147|gb|EEE60279.1| hypothetical protein OsJ_13327 [Oryza sativa Japonica Group]
Length = 288
Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 132/170 (77%), Gaps = 1/170 (0%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYR-FFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLE 60
P+P+T YR+KKV KE LP+DT+ Y S ++ TNQG++ A PV+LVDGYNVCGYW KL+
Sbjct: 68 PQPATRYRKKKVIKEVLPDDTDFYDDASSTLHYTNQGLEIASPVILVDGYNVCGYWGKLK 127
Query: 61 NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETC 120
F+ GR ++ARQ LI+ELV FS +RE+KVVVVFDA SGL THKE + GVD+V+ G+
Sbjct: 128 KDFMNGRQEIARQMLIDELVSFSAVREIKVVVVFDAAASGLSTHKETYKGVDVVYSGDLS 187
Query: 121 ADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
AD+WIEKE+ AL DGCPKVWVVTSD L+Q A+G GA +WSSK LV E+
Sbjct: 188 ADSWIEKEVEALVADGCPKVWVVTSDALEQQLAHGEGALIWSSKRLVKEI 237
>gi|168008158|ref|XP_001756774.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692012|gb|EDQ78371.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 129/182 (70%), Gaps = 13/182 (7%)
Query: 3 RPSTSYRRKKVEKEELPEDTELY-RFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLEN 61
RPSTSYR+K VEK+E+P+ + + + +YNTN G D A VLLVDGYNVCG+WPKL+
Sbjct: 36 RPSTSYRKKPVEKQEMPDGADNFVDPTTKLYNTNDGFDFATSVLLVDGYNVCGFWPKLKK 95
Query: 62 HFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETCA 121
HF +G+L+ AR KLI EL+ F+ ++ +KVV VFDA MSGLPTHKE VDIV+ T A
Sbjct: 96 HFARGQLETARDKLIHELITFTHVKGLKVVCVFDAAMSGLPTHKECLNSVDIVYVANTDA 155
Query: 122 DAWIEKE------------IVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSE 169
D+WIE+E + LR DGCPKVWV TSD QHAA+GAGA+VWS K L+SE
Sbjct: 156 DSWIEREAILQMSNYTVWQVTLLRADGCPKVWVATSDTFHQHAAHGAGAYVWSCKNLISE 215
Query: 170 VS 171
++
Sbjct: 216 IN 217
>gi|168027423|ref|XP_001766229.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682443|gb|EDQ68861.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 249
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 127/172 (73%), Gaps = 3/172 (1%)
Query: 3 RPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLEN 61
+PSTSYR+K+V+K+++P + Y + +Y+TN G + A PVLLVDGYN+CG WPKL+
Sbjct: 36 KPSTSYRKKRVDKQDMPNGADPYEDPTTKLYHTNDGFELATPVLLVDGYNMCGAWPKLKK 95
Query: 62 HFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETCA 121
HF +G+L+ AR KLI EL+ F+ ++ VKVV VFDA+MSGLPTHKE VDIV+ +T A
Sbjct: 96 HFSRGQLETARDKLIHELITFTHVKGVKVVCVFDAVMSGLPTHKESVNSVDIVYSADTDA 155
Query: 122 DAWIEKEIVA--LREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEVS 171
D+WIE+E DGCPKVWV TSD Q AA+GAGA+VW+ K L+SE++
Sbjct: 156 DSWIEREASDCYFMADGCPKVWVATSDSFHQQAAHGAGAYVWTCKNLISEIN 207
>gi|242037447|ref|XP_002466118.1| hypothetical protein SORBIDRAFT_01g001680 [Sorghum bicolor]
gi|241919972|gb|EER93116.1| hypothetical protein SORBIDRAFT_01g001680 [Sorghum bicolor]
Length = 289
Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYR-FFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLE 60
P+P+T YR+KKV KE LP+DT+ Y S ++ TN+G++ A PV+LVDGYNVCGYW KL+
Sbjct: 69 PQPATRYRKKKVIKEVLPDDTDFYEDASSTLHLTNEGLEIASPVILVDGYNVCGYWGKLK 128
Query: 61 NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETC 120
F+ GR ++ARQ LI+ELV FS +REVKVVVVFDA SGL THKE + GVD+V+ +
Sbjct: 129 KDFMNGRQEIARQTLIDELVSFSAVREVKVVVVFDAANSGLSTHKETYKGVDVVYSADLS 188
Query: 121 ADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
AD+WIEKE+ AL DGCPKVWVVTSD L+Q A+G GA +WSSK LV E+
Sbjct: 189 ADSWIEKEVEALVADGCPKVWVVTSDALEQQLAHGEGALIWSSKRLVKEL 238
>gi|302759999|ref|XP_002963422.1| hypothetical protein SELMODRAFT_141908 [Selaginella moellendorffii]
gi|300168690|gb|EFJ35293.1| hypothetical protein SELMODRAFT_141908 [Selaginella moellendorffii]
Length = 274
Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 3 RPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLEN 61
+P+TSYR+KKV+K+ LPED E Y + + + + I PVLLVDGYN+CG WPKL+
Sbjct: 54 KPATSYRKKKVDKKSLPEDFESYEDPATQVIDCGKEITIIQPVLLVDGYNMCGVWPKLKK 113
Query: 62 HFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETCA 121
HF +G L AR+KLI+ELV FS R +KVVVVFDA SGLP+H+E VDIVF + CA
Sbjct: 114 HFARGDLLSAREKLIDELVTFSAARGMKVVVVFDAKESGLPSHRESRASVDIVFAADACA 173
Query: 122 DAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
D+WIE+E+ LR+DGCPK+ VVTSD L Q A GAGA+VWS K L+ E+
Sbjct: 174 DSWIEREVYLLRDDGCPKIRVVTSDSLHQQVANGAGAYVWSCKGLIGEI 222
>gi|195626310|gb|ACG34985.1| RNA-binding protein containing a PIN domain [Zea mays]
Length = 289
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLE 60
P+P+T YR+KKV KE LP+DT+ Y S ++ TN+G++ A PV+LVDGYNVCGYW KL+
Sbjct: 69 PQPATRYRKKKVIKEVLPDDTDFYEDPSSTLHLTNEGLEIASPVILVDGYNVCGYWGKLK 128
Query: 61 NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETC 120
F+ GR ++ARQ LI+ELV FS +REVKVVVVFDA SGL THKE + GVD+V+ +
Sbjct: 129 KDFMNGRQEIARQTLIDELVSFSAVREVKVVVVFDAANSGLSTHKETYKGVDVVYSADLS 188
Query: 121 ADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
AD+WIEKE+ AL DGCPKVWVVTSD L+Q A+G GA +WSSK LV E+
Sbjct: 189 ADSWIEKEVEALVADGCPKVWVVTSDALEQQLAHGEGALIWSSKRLVKEL 238
>gi|219363159|ref|NP_001136948.1| uncharacterized protein LOC100217107 [Zea mays]
gi|194697726|gb|ACF82947.1| unknown [Zea mays]
gi|238008270|gb|ACR35170.1| unknown [Zea mays]
gi|414873862|tpg|DAA52419.1| TPA: hypothetical protein ZEAMMB73_837918 [Zea mays]
Length = 289
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLE 60
P+P+T YR+KKV KE LP+DT+ Y S ++ TN+G++ A PV+LVDGYNVCGYW KL+
Sbjct: 69 PQPATRYRKKKVIKEVLPDDTDFYEDPSSTLHLTNEGLEIASPVILVDGYNVCGYWGKLK 128
Query: 61 NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETC 120
F+ GR ++ARQ LI+ELV FS +REVKVVVVFDA SGL THKE + GVD+V+ +
Sbjct: 129 KDFMNGRQEIARQTLIDELVSFSAVREVKVVVVFDAANSGLSTHKETYKGVDVVYSADLS 188
Query: 121 ADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
AD+WIEKE+ AL DGCPKVWVVTSD L+Q A+G GA +WSSK LV E+
Sbjct: 189 ADSWIEKEVEALVADGCPKVWVVTSDALEQQLAHGEGALIWSSKRLVKEL 238
>gi|302776834|ref|XP_002971560.1| hypothetical protein SELMODRAFT_441595 [Selaginella moellendorffii]
gi|300160692|gb|EFJ27309.1| hypothetical protein SELMODRAFT_441595 [Selaginella moellendorffii]
Length = 274
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 122/169 (72%), Gaps = 1/169 (0%)
Query: 3 RPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLEN 61
+P+TSYR+KKV+K+ LPED E Y + + + + I PVLLVDGYN+CG WPKL+
Sbjct: 54 KPATSYRKKKVDKKSLPEDFESYEDPATQVIDCGKEITIIKPVLLVDGYNMCGVWPKLKK 113
Query: 62 HFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETCA 121
HF +G L AR+KLI+ELV F R +KVVVVFDA SGLP+H+E VDIVF + CA
Sbjct: 114 HFARGDLLSAREKLIDELVTFGAARGMKVVVVFDAKESGLPSHRESRASVDIVFAADACA 173
Query: 122 DAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
D+WIE+E+ LR+DGCPK+ VVTSD L Q A GAGA+VWS K L+ E+
Sbjct: 174 DSWIEREVYLLRDDGCPKIRVVTSDSLHQQVANGAGAYVWSCKGLIGEI 222
>gi|218194081|gb|EEC76508.1| hypothetical protein OsI_14278 [Oryza sativa Indica Group]
Length = 266
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 115/169 (68%), Gaps = 21/169 (12%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLEN 61
P+P+T YR+KK G NA PV+LVDGYNVCGYW KL+
Sbjct: 68 PQPATRYRKKK---------------------HKSGFGNASPVILVDGYNVCGYWGKLKK 106
Query: 62 HFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETCA 121
F+ GR ++ARQ LI+ELV FS +RE+KVVVVFDA SGL THKE + GVD+V+ G+ A
Sbjct: 107 DFMNGRQEIARQMLIDELVSFSAVREIKVVVVFDAAASGLSTHKETYKGVDVVYSGDLSA 166
Query: 122 DAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
D+WIEKE+ AL DGCPKVWVVTSD L+Q A+G GA +WSSK LV E+
Sbjct: 167 DSWIEKEVEALVADGCPKVWVVTSDALEQQLAHGEGALIWSSKRLVKEI 215
>gi|3894173|gb|AAC78523.1| hypothetical protein [Arabidopsis thaliana]
Length = 152
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/130 (76%), Positives = 118/130 (90%), Gaps = 2/130 (1%)
Query: 1 MPRPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGI-DNAVPVLLVDGYNVCGYWPK 58
M +P+TSYR+KKVEK+ELP+D+ELYR + +Y TNQG+ D+AVPVLLVDGYNVCGYW K
Sbjct: 1 MAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYTNQGLLDDAVPVLLVDGYNVCGYWMK 60
Query: 59 LENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGE 118
L+ HF+KGRLDVARQKL++ELV FSM++EVKVVVVFDALMSGLPTHKE+F GVD++F GE
Sbjct: 61 LKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVVVFDALMSGLPTHKEDFAGVDVIFSGE 120
Query: 119 TCADAWIEKE 128
TCADAWIEKE
Sbjct: 121 TCADAWIEKE 130
>gi|108712034|gb|ABF99829.1| expressed protein [Oryza sativa Japonica Group]
Length = 309
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 110/138 (79%)
Query: 33 NTNQGIDNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVV 92
+TNQG++ A PV+LVDGYNVCGYW KL+ F+ GR ++ARQ LI+ELV FS +RE+KVVV
Sbjct: 121 STNQGLEIASPVILVDGYNVCGYWGKLKKDFMNGRQEIARQMLIDELVSFSAVREIKVVV 180
Query: 93 VFDALMSGLPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHA 152
VFDA SGL THKE + GVD+V+ G+ AD+WIEKE+ AL DGCPKVWVVTSD L+Q
Sbjct: 181 VFDAAASGLSTHKETYKGVDVVYSGDLSADSWIEKEVEALVADGCPKVWVVTSDALEQQL 240
Query: 153 AYGAGAFVWSSKALVSEV 170
A+G GA +WSSK LV E+
Sbjct: 241 AHGEGALIWSSKRLVKEI 258
>gi|357121689|ref|XP_003562550.1| PREDICTED: uncharacterized protein LOC100834883 [Brachypodium
distachyon]
Length = 293
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 127/170 (74%), Gaps = 1/170 (0%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYRF-FSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLE 60
P+P+T +R+KKV KE LP+DT+ + S + TN+G++ A PV+LVDGYNVCGYW KL+
Sbjct: 73 PQPATRFRKKKVMKEVLPDDTDFFEDPSSTLTYTNEGLEIASPVILVDGYNVCGYWKKLK 132
Query: 61 NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETC 120
+ F+ G +ARQ LI+ELV FS +REVKVVVVFDA +SG TH E + GVD+V+ +
Sbjct: 133 SDFLNGNQGIARQMLIDELVTFSAVREVKVVVVFDAALSGHSTHTETYKGVDVVYSADLS 192
Query: 121 ADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
AD WIEKE+ AL DGCPKVWVVTSD L+Q A+G GA +WSSK LV E+
Sbjct: 193 ADCWIEKEVEALVADGCPKVWVVTSDVLEQQLAHGEGALIWSSKRLVKEI 242
>gi|356577464|ref|XP_003556845.1| PREDICTED: uncharacterized protein LOC100777272 [Glycine max]
Length = 347
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 108/151 (71%), Gaps = 10/151 (6%)
Query: 22 TELYRFFSYIYNTNQGI-DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELV 80
T LY + QGI N VPV+LVDGYNVCGYW KL+ F+KGRLD+A QKLI+EL+
Sbjct: 151 TALYWAARFGSTNLQGILHNVVPVVLVDGYNVCGYWMKLKKDFVKGRLDIAHQKLIDELL 210
Query: 81 EFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGETCADAWIEK-EIVALREDGCPK 139
FSM+R VK+V+ FDA+MSGLPTHKE+ F G + E+ ++ AL+EDGCPK
Sbjct: 211 SFSMLR-VKIVIFFDAMMSGLPTHKED-------FAGHVTLKGFNERTKVAALKEDGCPK 262
Query: 140 VWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
VWVVTS+H Q AA+G G F+WS KALV+E+
Sbjct: 263 VWVVTSNHYHQQAAHGVGTFIWSCKALVTEI 293
>gi|302795817|ref|XP_002979671.1| hypothetical protein SELMODRAFT_419362 [Selaginella moellendorffii]
gi|300152431|gb|EFJ19073.1| hypothetical protein SELMODRAFT_419362 [Selaginella moellendorffii]
Length = 156
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 60/83 (72%)
Query: 88 VKVVVVFDALMSGLPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDH 147
+KVVVVFDA SGLP+H+E VDIVF + C D+WI++E+ LR+DGCPK+ V+TSD
Sbjct: 1 MKVVVVFDAKESGLPSHRESRASVDIVFAADACTDSWIKREVYLLRDDGCPKIRVITSDS 60
Query: 148 LQQHAAYGAGAFVWSSKALVSEV 170
L Q A G G +VWS K L+ E+
Sbjct: 61 LHQQVANGTGVYVWSCKGLIGEI 83
>gi|326491367|dbj|BAJ94563.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELYRFFSYIYN-TNQG-IDNAVPVLLVDGYNVCGYWPKL 59
P+P+T +R+KKV KE LP+DT+ Y S TN G I+ A PV+LVDGYNVCGYW KL
Sbjct: 71 PQPATRFRKKKVMKEVLPDDTDFYEDPSATLTCTNDGSIEIASPVILVDGYNVCGYWGKL 130
Query: 60 ENHFIKGRLDVARQKLIEELVEFSMIR 86
++ F+ G +ARQ LI+ELV FS +R
Sbjct: 131 KSDFLNGNQGIARQMLIDELVSFSAVR 157
>gi|302797128|ref|XP_002980325.1| hypothetical protein SELMODRAFT_420051 [Selaginella moellendorffii]
gi|300151941|gb|EFJ18585.1| hypothetical protein SELMODRAFT_420051 [Selaginella moellendorffii]
Length = 206
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 60/95 (63%), Gaps = 7/95 (7%)
Query: 88 VKVVVVFDALMSGLPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDH 147
+KVVVVFDA SGLP+H+E VDIVF + CAD+WI++E+ LR+DGCPK+ V+TSD
Sbjct: 1 MKVVVVFDAKESGLPSHRESRASVDIVFAADACADSWIKREVYLLRDDGCPKIRVITSDS 60
Query: 148 LQQHAAYGAGAFV-------WSSKALVSEVSLIIY 175
L Q A GA V S L S L+IY
Sbjct: 61 LHQQVANGAIKDVRKELEQLLHSDRLFSSPKLLIY 95
>gi|302812931|ref|XP_002988152.1| hypothetical protein SELMODRAFT_426874 [Selaginella moellendorffii]
gi|300144258|gb|EFJ10944.1| hypothetical protein SELMODRAFT_426874 [Selaginella moellendorffii]
Length = 221
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 52/69 (75%)
Query: 88 VKVVVVFDALMSGLPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDH 147
+KVVVVFDA SGLP+H+E VDIVF + CAD+WI++E+ LR+DGCPK+ V+TSD
Sbjct: 1 MKVVVVFDAKESGLPSHRESRASVDIVFAADACADSWIKREVYLLRDDGCPKIRVITSDS 60
Query: 148 LQQHAAYGA 156
L Q A GA
Sbjct: 61 LHQQVANGA 69
>gi|452994661|emb|CCQ93771.1| putative ribonuclease with PIN and NYN domains [Clostridium
ultunense Esp]
Length = 172
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM----- 98
+L+VDGYN+ G WPKL G L+ AR++LIE L E+ KV+VVFDA
Sbjct: 4 ILIVDGYNIIGAWPKLRQLKESGHLEEARRQLIEILAEYQSFSGRKVIVVFDAHQVYGRE 63
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
L H+ +D+ F GE AD WIE+ V ++ +++V TSD +Q +G G
Sbjct: 64 KSLRIHR-----IDVYFTGEKETADEWIER-FVKRKKSRRNQLFVATSDETEQRVIFGGG 117
Query: 158 AFVWSSKALVSEV 170
A S++ L++E+
Sbjct: 118 ALRISARELLNEM 130
>gi|408790754|ref|ZP_11202367.1| hypothetical protein B807_1205 [Lactobacillus florum 2F]
gi|408519943|gb|EKK20056.1| hypothetical protein B807_1205 [Lactobacillus florum 2F]
Length = 173
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
P+L+VDGYN+ G WP+L+ + L ARQ+L+E L + E ++VVVFDA+ + P
Sbjct: 4 PLLVVDGYNIIGAWPELQRLGKQHGLAAARQQLLETLSNYQKYSEKEIVVVFDAMDAAGP 63
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K++ + +VF E AD++IE I ++ + +V V TSDH +Q + GA
Sbjct: 64 VQKQQERNLMVVFSAENQTADSYIEALIAKIK-NQDRQVEVATSDHAEQWTIFSNGALRT 122
Query: 162 SSKALVSEVSL 172
S++ L + + +
Sbjct: 123 SARELATAIRM 133
>gi|386320161|ref|YP_006016324.1| hypothetical protein SPSE_2254 [Staphylococcus pseudintermedius
ED99]
gi|323465332|gb|ADX77485.1| conserved hypothetical protein [Staphylococcus pseudintermedius
ED99]
Length = 175
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
+++DGYN+ G KL + K L+ AR++L+ E+ +S + + K+V VFDA G P
Sbjct: 7 VIIDGYNMIGQSQKL-SRVAKESLEEAREQLLIEISNYSAVTKGKIVCVFDAYDRGTPQS 65
Query: 105 KEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ E+ GV +VF E AD++IE+ + + + VVTSD +QHA +G GA+ SS
Sbjct: 66 EYEYHGVHVVFTKEHETADSFIERYVYNIYNKHTTHITVVTSDMSEQHAIFGTGAYRLSS 125
Query: 164 KAL 166
+ +
Sbjct: 126 REM 128
>gi|115456521|ref|NP_001051861.1| Os03g0843200 [Oryza sativa Japonica Group]
gi|113550332|dbj|BAF13775.1| Os03g0843200, partial [Oryza sativa Japonica Group]
Length = 108
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 44/57 (77%)
Query: 114 VFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
V+ G+ AD+WIEKE+ AL DGCPKVWVVTSD L+Q A+G GA +WSSK LV E+
Sbjct: 1 VYSGDLSADSWIEKEVEALVADGCPKVWVVTSDALEQQLAHGEGALIWSSKRLVKEI 57
>gi|365157346|ref|ZP_09353619.1| hypothetical protein HMPREF1015_02884 [Bacillus smithii 7_3_47FAA]
gi|363625247|gb|EHL76289.1| hypothetical protein HMPREF1015_02884 [Bacillus smithii 7_3_47FAA]
Length = 169
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G WP+L+ K L AR +LIE++ E+ KV+VVFDA + G
Sbjct: 1 MNILLVDGYNIIGAWPELQ-ELKKKDLAAARDRLIEKMAEYQGYSGFKVIVVFDAHYVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + + V++VF E AD WIEK+ + L + +V+V TSD+ +Q A +G GA
Sbjct: 60 IEKRYQNY-QVEVVFTRENESADEWIEKKAIELT-NIRNQVYVATSDYTEQWAVFGQGAL 117
Query: 160 VWSSKALV 167
S++ L+
Sbjct: 118 RISARELL 125
>gi|298709820|emb|CBJ31618.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 240
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 22/175 (12%)
Query: 6 TSYRR-KKVEKEEL--PEDTELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLENH 62
YRR K + E++ PED S+IY + + P L+VDGYN+ +W K
Sbjct: 17 NKYRRVKNTDYEDIVEPED------LSHIY-----MPDIAPALMVDGYNIIFHWSKCSIV 65
Query: 63 FIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIG---VDIVFP--G 117
G L+ AR+ L+EEL + +R V VVFDA K ++ +D+VF G
Sbjct: 66 ADNGDLEGARRILVEELDTLAAMRGWTVTVVFDAYKRKGRARK--YVTPNEIDVVFTSNG 123
Query: 118 ETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEVSL 172
E+ AD ++E+ L++ GCP V V T D L Q GAGA V+S ++ E+ +
Sbjct: 124 ES-ADMYVERLTEQLKDSGCPNVMVATGDKLMQSLVVGAGAEVFSPDRIIEEIEI 177
>gi|158319525|ref|YP_001512032.1| hypothetical protein Clos_0474 [Alkaliphilus oremlandii OhILAs]
gi|158139724|gb|ABW18036.1| protein of unknown function DUF901 [Alkaliphilus oremlandii OhILAs]
Length = 170
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 4/131 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L++DGYNV WP+LE + L+VAR LI ++ E+ + + V++VFDA L+ G
Sbjct: 5 LILDGYNVINSWPELE-RLMSQSLEVARTDLIGKMAEYRAYKGINVIIVFDAYLVKGSNR 63
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E+ GV+IVF E ADA+IE+ I L + +V VVT+D ++Q G GA S
Sbjct: 64 SNEKLQGVEIVFTKEKETADAYIERLITQLSSN-RNRVSVVTNDWVEQQMVLGGGATRVS 122
Query: 163 SKALVSEVSLI 173
+ +V E I
Sbjct: 123 VREMVLEFDQI 133
>gi|255022534|ref|ZP_05294520.1| Yacp protein [Listeria monocytogenes FSL J1-208]
gi|422808358|ref|ZP_16856769.1| hypothetical protein LMIV_0014 [Listeria monocytogenes FSL J1-208]
gi|378753392|gb|EHY63976.1| hypothetical protein LMIV_0014 [Listeria monocytogenes FSL J1-208]
Length = 170
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L F+K R L+ AR KL+E + E+ +VVVVFDA
Sbjct: 3 QILLVDGYNVIGAWPEL--SFLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVRG 60
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V++VF E AD +IE++ + + + ++ V TSD+ +Q A +G GA
Sbjct: 61 VKRKSKKYQVEVVFTHEDETADEYIEQKAIEWK-NARTQIMVATSDYTEQWAIFGQGALR 119
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 120 ISSRELLFEIQ 130
>gi|116871625|ref|YP_848406.1| hypothetical protein lwe0205 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740503|emb|CAK19623.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 170
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L F+K R L+ AR KLIE + E+ +VVVVFDA
Sbjct: 3 QILLVDGYNVIGAWPEL--SFLKDRDLEAARDKLIEWMAEYQSYTGYRVVVVFDAQFVRG 60
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V++VF E AD +IE++ + + + ++ V TSD+ +Q A +G GA
Sbjct: 61 VKRKSKKHQVEVVFTHEDETADEYIEQKAIEWK-NARTQIIVATSDYTEQWAIFGQGALR 119
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 120 ISSRELLFEIQ 130
>gi|428773072|ref|YP_007164860.1| hypothetical protein Cyast_1246 [Cyanobacterium stanieri PCC 7202]
gi|428687351|gb|AFZ47211.1| protein of unknown function DUF901 [Cyanobacterium stanieri PCC
7202]
Length = 183
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G W L+ K L+ ARQ L++ LV ++ + ++ VVFDA P
Sbjct: 9 ILLVDGYNIIGAWNSLKRIRDKNGLEYARQSLLDILVNYTGYKALETTVVFDAHYQKTPG 68
Query: 104 HKEEF---IGVDIVFPGETCADAWIEKEIVALRE---DGCPKVWVVTSDHLQQHAAYGAG 157
+KE++ + V ET AD +IEK + + D ++ V TSD Q+H G G
Sbjct: 69 YKEKYSDRVSVHYTSHNET-ADTYIEKYCASFQRKNPDTSTRIIVATSDQAQRHTVVGYG 127
Query: 158 AFVWSSKALVSEVSL 172
A S++ L E+ L
Sbjct: 128 AEWMSAQHLAKEIDL 142
>gi|16799351|ref|NP_469619.1| hypothetical protein lin0274 [Listeria innocua Clip11262]
gi|16412703|emb|CAC95507.1| lin0274 [Listeria innocua Clip11262]
Length = 170
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L F+K R L+ AR KLIE + E+ +VVVVFDA
Sbjct: 3 QILLVDGYNVIGAWPEL--SFLKDRDLEAARDKLIEWMAEYQSYTGYRVVVVFDAQFVRG 60
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V++VF E AD +IE++ + + + ++ V TSD+ +Q A +G GA
Sbjct: 61 VKRKSKKHQVEVVFTHEDETADEYIEQKAIEWK-NARTQIIVATSDYTEQWAIFGQGALR 119
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 120 ISSRELLFEIQ 130
>gi|422411614|ref|ZP_16488573.1| YacP [Listeria innocua FSL S4-378]
gi|423099302|ref|ZP_17087009.1| hypothetical protein HMPREF0557_00875 [Listeria innocua ATCC 33091]
gi|313620924|gb|EFR92098.1| YacP [Listeria innocua FSL S4-378]
gi|370794200|gb|EHN61982.1| hypothetical protein HMPREF0557_00875 [Listeria innocua ATCC 33091]
Length = 171
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L F+K R L+ AR KLIE + E+ +VVVVFDA
Sbjct: 4 QILLVDGYNVIGAWPEL--SFLKDRDLEAARDKLIEWMAEYQSYTGYRVVVVFDAQFVRG 61
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V++VF E AD +IE++ + + + ++ V TSD+ +Q A +G GA
Sbjct: 62 VKRKSKKHQVEVVFTHEDETADEYIEQKAIEWK-NARTQIIVATSDYTEQWAIFGQGALR 120
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 121 ISSRELLFEIQ 131
>gi|300857264|ref|YP_003782248.1| RNA-binding protein [Clostridium ljungdahlii DSM 13528]
gi|300437379|gb|ADK17146.1| putative RNA-binding protein [Clostridium ljungdahlii DSM 13528]
Length = 170
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+ VDGYNV WPKL N IK L+ ARQ LIE L +S+ + KV +VFDA M
Sbjct: 4 IFVDGYNVINSWPKLNN--IKNYSLETARQSLIETLSNYSVYKGYKVFIVFDAHMVSGSL 61
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K+E I V +VF E AD++IE+ + + +V+VVTSD L+Q + GA
Sbjct: 62 EKKEKINKNVVVVFTKENETADSFIERTVNNIGRKN--EVFVVTSDSLEQQVTFQRGAVR 119
Query: 161 WSSKALVSEVS 171
SS EV+
Sbjct: 120 MSSIEFYHEVN 130
>gi|46906475|ref|YP_012864.1| hypothetical protein LMOf2365_0254 [Listeria monocytogenes serotype
4b str. F2365]
gi|47094583|ref|ZP_00232235.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|217965670|ref|YP_002351348.1| hypothetical protein LMHCC_2397 [Listeria monocytogenes HCC23]
gi|226222871|ref|YP_002756978.1| Yacp protein [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|254825714|ref|ZP_05230715.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254853491|ref|ZP_05242839.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254932461|ref|ZP_05265820.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|254991758|ref|ZP_05273948.1| Yacp protein [Listeria monocytogenes FSL J2-064]
gi|255520314|ref|ZP_05387551.1| Yacp protein [Listeria monocytogenes FSL J1-175]
gi|290892617|ref|ZP_06555610.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|300764633|ref|ZP_07074625.1| hypothetical protein LMHG_11121 [Listeria monocytogenes FSL N1-017]
gi|386006971|ref|YP_005925249.1| hypothetical protein lmo4a_0258 [Listeria monocytogenes L99]
gi|386025553|ref|YP_005946329.1| hypothetical protein LMM7_0265 [Listeria monocytogenes M7]
gi|386731007|ref|YP_006204503.1| Yacp protein [Listeria monocytogenes 07PF0776]
gi|404279792|ref|YP_006680690.1| hypothetical protein LMOSLCC2755_0240 [Listeria monocytogenes
SLCC2755]
gi|404285609|ref|YP_006692195.1| hypothetical protein LMOSLCC2482_0242 [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|404406695|ref|YP_006689410.1| hypothetical protein LMOSLCC2376_0212 [Listeria monocytogenes
SLCC2376]
gi|404412343|ref|YP_006697930.1| hypothetical protein LMOSLCC7179_0237 [Listeria monocytogenes
SLCC7179]
gi|405748585|ref|YP_006672051.1| hypothetical protein LMOATCC19117_0250 [Listeria monocytogenes ATCC
19117]
gi|405751459|ref|YP_006674924.1| hypothetical protein LMOSLCC2378_0255 [Listeria monocytogenes
SLCC2378]
gi|405754327|ref|YP_006677791.1| hypothetical protein LMOSLCC2540_0248 [Listeria monocytogenes
SLCC2540]
gi|406703015|ref|YP_006753369.1| hypothetical protein LMOL312_0240 [Listeria monocytogenes L312]
gi|417316548|ref|ZP_12103192.1| Yacp protein [Listeria monocytogenes J1-220]
gi|422408273|ref|ZP_16485234.1| YacP [Listeria monocytogenes FSL F2-208]
gi|424713107|ref|YP_007013822.1| Uncharacterized protein yacP [Listeria monocytogenes serotype 4b
str. LL195]
gi|424821973|ref|ZP_18246986.1| YacP [Listeria monocytogenes str. Scott A]
gi|46879739|gb|AAT03041.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
str. F2365]
gi|47017043|gb|EAL07924.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|217334940|gb|ACK40734.1| YacP [Listeria monocytogenes HCC23]
gi|225875333|emb|CAS04030.1| Putative Yacp protein [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258606863|gb|EEW19471.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|290557926|gb|EFD91447.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|293584017|gb|EFF96049.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293594958|gb|EFG02719.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300514740|gb|EFK41795.1| hypothetical protein LMHG_11121 [Listeria monocytogenes FSL N1-017]
gi|307569781|emb|CAR82960.1| conserved hypothetical protein [Listeria monocytogenes L99]
gi|313611168|gb|EFR85992.1| YacP [Listeria monocytogenes FSL F2-208]
gi|328476083|gb|EGF46792.1| Yacp protein [Listeria monocytogenes J1-220]
gi|332310653|gb|EGJ23748.1| YacP [Listeria monocytogenes str. Scott A]
gi|336022134|gb|AEH91271.1| hypothetical protein LMM7_0265 [Listeria monocytogenes M7]
gi|384389765|gb|AFH78835.1| Yacp protein [Listeria monocytogenes 07PF0776]
gi|404217785|emb|CBY69149.1| hypothetical protein LMOATCC19117_0250 [Listeria monocytogenes ATCC
19117]
gi|404220659|emb|CBY72022.1| hypothetical protein LMOSLCC2378_0255 [Listeria monocytogenes
SLCC2378]
gi|404223527|emb|CBY74889.1| hypothetical protein LMOSLCC2540_0248 [Listeria monocytogenes
SLCC2540]
gi|404226427|emb|CBY47832.1| hypothetical protein LMOSLCC2755_0240 [Listeria monocytogenes
SLCC2755]
gi|404238042|emb|CBY59443.1| hypothetical protein LMOSLCC7179_0237 [Listeria monocytogenes
SLCC7179]
gi|404240844|emb|CBY62244.1| hypothetical protein LMOSLCC2376_0212 [Listeria monocytogenes
SLCC2376]
gi|404244538|emb|CBY02763.1| hypothetical protein LMOSLCC2482_0242 [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|406360045|emb|CBY66318.1| hypothetical protein LMOL312_0240 [Listeria monocytogenes L312]
gi|424012291|emb|CCO62831.1| Uncharacterized protein yacP [Listeria monocytogenes serotype 4b
str. LL195]
Length = 170
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L F+K R L+ AR KL+E + E+ +VVVVFDA
Sbjct: 3 QILLVDGYNVIGAWPEL--SFLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVRG 60
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V++VF E AD +IE++ + + + ++ V TSD+ +Q A +G GA
Sbjct: 61 VKRKSKKYQVEVVFTHEDETADEYIEQKAIEWK-NVRTQIMVATSDYTEQWAIFGQGALR 119
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 120 ISSRELLFEIQ 130
>gi|386042578|ref|YP_005961383.1| hypothetical protein [Listeria monocytogenes 10403S]
gi|404409476|ref|YP_006695064.1| hypothetical protein LMOSLCC5850_0237 [Listeria monocytogenes
SLCC5850]
gi|345535812|gb|AEO05252.1| hypothetical protein LMRG_02664 [Listeria monocytogenes 10403S]
gi|404229302|emb|CBY50706.1| hypothetical protein LMOSLCC5850_0237 [Listeria monocytogenes
SLCC5850]
Length = 170
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L F+K R L+ AR KL+E + E+ +VVVVFDA
Sbjct: 3 QILLVDGYNVIGAWPEL--SFLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVRG 60
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V++VF E AD +IE++ + + + ++ V TSD+ +Q A +G GA
Sbjct: 61 VKRKSKKYQVEVVFTHEDETADEYIEQKAIEWK-NVRTQIMVATSDYTEQWAIFGQGALR 119
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 120 ISSRELLFEIQ 130
>gi|334120877|ref|ZP_08494954.1| protein of unknown function DUF901 [Microcoleus vaginatus FGP-2]
gi|333455876|gb|EGK84516.1| protein of unknown function DUF901 [Microcoleus vaginatus FGP-2]
Length = 184
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP+L + L+ AR++LIE LV +S +++ + +VFDA P
Sbjct: 9 VLLVDGYNIIGLWPRLREKRDRDELETARRELIEVLVNYSAVQDFEARLVFDAHYRDTPG 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALRED-----GCPKVWVVTSDHLQQHAAYG 155
KE + + V G+T AD +IEK +LR + G ++ V TSD QQ G
Sbjct: 69 VKEIITKNLSVHYTDFGQT-ADTYIEKSCASLRYELRSVKGKGRMIVATSDRAQQLTVVG 127
Query: 156 AGAFVWSSKALVSEV 170
GA S++ L ++V
Sbjct: 128 YGAEWMSAEQLAADV 142
>gi|422414688|ref|ZP_16491645.1| YacP [Listeria innocua FSL J1-023]
gi|313625370|gb|EFR95161.1| YacP [Listeria innocua FSL J1-023]
Length = 171
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L F+K R L+ +R KLIE + E+ +VVVVFDA
Sbjct: 4 QILLVDGYNVIGAWPEL--SFLKDRDLEASRDKLIEWMAEYQSYTGYRVVVVFDAQFVRG 61
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V++VF E AD +IE++ + + + ++ V TSD+ +Q A +G GA
Sbjct: 62 VKRKSKKHQVEVVFTHEDETADEYIEQKAIEWK-NARTQIIVATSDYTEQWAIFGQGALR 120
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 121 ISSRELLFEIQ 131
>gi|428317392|ref|YP_007115274.1| protein of unknown function DUF901 [Oscillatoria nigro-viridis PCC
7112]
gi|428241072|gb|AFZ06858.1| protein of unknown function DUF901 [Oscillatoria nigro-viridis PCC
7112]
Length = 184
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 9/136 (6%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
VLLVDGYN+ G WP+L + L+ AR++LIE LV +S +++ + +VFDA P
Sbjct: 8 AVLLVDGYNIIGLWPRLREKRDRDELETARRELIEVLVNYSAVQDFEARLVFDAHYRDTP 67
Query: 103 THKE---EFIGVDIVFPGETCADAWIEKEIVALRED-----GCPKVWVVTSDHLQQHAAY 154
KE + + V G+T AD +IEK +LR + G ++ V TSD QQ
Sbjct: 68 GVKEIITKNLSVHYTDFGQT-ADTYIEKSCASLRYELRSVKGKGRMIVATSDRAQQLTVV 126
Query: 155 GAGAFVWSSKALVSEV 170
G GA S++ L ++V
Sbjct: 127 GYGAEWMSAEQLAADV 142
>gi|347547718|ref|YP_004854046.1| hypothetical protein LIV_0219 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346980789|emb|CBW84699.1| Putative Yacp protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 170
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L ++K R L+ AR KLIE + E+ +VVVVFDA
Sbjct: 3 QILLVDGYNVIGAWPEL--SYLKDRDLEAARDKLIEWMAEYQSYTGYRVVVVFDAQFVRG 60
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K V++VF E AD +IE++ + + D ++ V TSD+ +Q A +G GA
Sbjct: 61 VKRKSMKHQVEVVFTHEDETADEFIEQKAIEWK-DARTQIIVATSDYTEQWAIFGQGALR 119
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 120 ISSRELLFEIQ 130
>gi|150392178|ref|YP_001322227.1| hypothetical protein Amet_4496 [Alkaliphilus metalliredigens QYMF]
gi|149952040|gb|ABR50568.1| protein of unknown function DUF901 [Alkaliphilus metalliredigens
QYMF]
Length = 169
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L++DGYNV WPKL+ +G LD AR++L+E + E+ + ++V+VVFDA L+ G
Sbjct: 5 LVLDGYNVLNGWPKLK-ELCQGDLDGARKELLEMMAEYGSFKGIEVIVVFDAHLVKGSMQ 63
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E+ GV++VF E AD++IE+ I L +V V T+D +Q G GA S
Sbjct: 64 KNEKLKGVEVVFTKEKQTADSYIERLITEL--SIRNRVVVATNDWAEQQMVLGGGATRIS 121
Query: 163 SKALVSE 169
+ LV E
Sbjct: 122 VRELVLE 128
>gi|347751612|ref|YP_004859177.1| hypothetical protein Bcoa_1183 [Bacillus coagulans 36D1]
gi|347584130|gb|AEP00397.1| protein of unknown function DUF901 [Bacillus coagulans 36D1]
Length = 173
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 5/136 (3%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-M 98
N + +LLVDGYN+ G WP+L+ + L AR +L+E + E+ + KV+VVFDA +
Sbjct: 3 NKMNILLVDGYNIIGAWPELQ-KLKQKDLGAARDRLVEIMAEYQGYTDDKVIVVFDAYGV 61
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
GL K + V+++F E AD IEK + L + +++V TSD +Q +G G
Sbjct: 62 KGLE-KKYRYHKVEVIFTKENETADERIEKMAIKL-NNIRTQIYVATSDFTEQWQIFGQG 119
Query: 158 AFVWSSKALVSEVSLI 173
A S++ L+++V +I
Sbjct: 120 ALRISARELLTKVEMI 135
>gi|434397894|ref|YP_007131898.1| protein of unknown function DUF901 [Stanieria cyanosphaera PCC
7437]
gi|428268991|gb|AFZ34932.1| protein of unknown function DUF901 [Stanieria cyanosphaera PCC
7437]
Length = 182
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ G W +L+ L+ AR++LIE L+ ++ +R + +VFDA P++
Sbjct: 10 LLVDGYNIIGAWSQLKESRDLYGLEAARRELIEALINYAALRTYQTQIVFDAHYQKTPSY 69
Query: 105 KEE---FIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYGAG 157
EE F+ V ET AD +IE+ A R +D ++ V TSD QQ G G
Sbjct: 70 SEEYTSFLSVYYTAFAET-ADTYIERLCAAFRSNKYQDKYARIIVATSDRAQQLTVTGYG 128
Query: 158 AFVWSSKALVSEVSL 172
A S++ L EV +
Sbjct: 129 AEWLSAQKLAGEVEI 143
>gi|16802288|ref|NP_463773.1| hypothetical protein lmo0242 [Listeria monocytogenes EGD-e]
gi|47097642|ref|ZP_00235162.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|254828702|ref|ZP_05233389.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|254913472|ref|ZP_05263484.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937947|ref|ZP_05269644.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|255027364|ref|ZP_05299350.1| hypothetical protein LmonocytFSL_15273 [Listeria monocytogenes FSL
J2-003]
gi|284800537|ref|YP_003412402.1| hypothetical protein LM5578_0284 [Listeria monocytogenes 08-5578]
gi|284993723|ref|YP_003415491.1| hypothetical protein LM5923_0283 [Listeria monocytogenes 08-5923]
gi|386045879|ref|YP_005964211.1| YacP protein [Listeria monocytogenes J0161]
gi|386049171|ref|YP_005967162.1| hypothetical protein [Listeria monocytogenes FSL R2-561]
gi|386052519|ref|YP_005970077.1| hypothetical protein [Listeria monocytogenes Finland 1998]
gi|404282674|ref|YP_006683571.1| hypothetical protein LMOSLCC2372_0244 [Listeria monocytogenes
SLCC2372]
gi|405757230|ref|YP_006686506.1| hypothetical protein LMOSLCC2479_0243 [Listeria monocytogenes
SLCC2479]
gi|16409607|emb|CAD00769.1| lmo0242 [Listeria monocytogenes EGD-e]
gi|47013986|gb|EAL04999.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258601107|gb|EEW14432.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258610556|gb|EEW23164.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|284056099|gb|ADB67040.1| hypothetical protein LM5578_0284 [Listeria monocytogenes 08-5578]
gi|284059190|gb|ADB70129.1| hypothetical protein LM5923_0283 [Listeria monocytogenes 08-5923]
gi|293591480|gb|EFF99814.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345532870|gb|AEO02311.1| YacP protein [Listeria monocytogenes J0161]
gi|346423017|gb|AEO24542.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-561]
gi|346645170|gb|AEO37795.1| conserved hypothetical protein [Listeria monocytogenes Finland
1998]
gi|404232176|emb|CBY53579.1| hypothetical protein LMOSLCC2372_0244 [Listeria monocytogenes
SLCC2372]
gi|404235112|emb|CBY56514.1| hypothetical protein LMOSLCC2479_0243 [Listeria monocytogenes
SLCC2479]
Length = 170
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L ++K R L+ AR KL+E + E+ +VVVVFDA
Sbjct: 3 QILLVDGYNVIGAWPEL--SYLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVRG 60
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V++VF E AD +IE++ + + + ++ V TSD+ +Q A +G GA
Sbjct: 61 VKRKSKKYQVEVVFTHEDETADEYIEQKAIEWK-NVRTQIMVATSDYTEQWAIFGQGALR 119
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 120 ISSRELLFEIQ 130
>gi|315274659|ref|ZP_07869499.1| YacP [Listeria marthii FSL S4-120]
gi|313615716|gb|EFR89004.1| YacP [Listeria marthii FSL S4-120]
Length = 170
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L ++K R L+ AR KL+E + E+ +VVVVFDA
Sbjct: 3 QILLVDGYNVIGAWPEL--SYLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFVRG 60
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V++VF E AD +IE++ + + + ++ V TSD+ +Q A +G GA
Sbjct: 61 VKRKSKKYQVEVVFTHEDETADEYIEQKAIEWK-NVRTQIMVATSDYTEQWAIFGQGALR 119
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 120 ISSRELLFEIQ 130
>gi|443475344|ref|ZP_21065297.1| protein of unknown function DUF901 [Pseudanabaena biceps PCC 7429]
gi|443019866|gb|ELS33900.1| protein of unknown function DUF901 [Pseudanabaena biceps PCC 7429]
Length = 181
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
PV+LVDGYNV G W L+ D+AR L E +V FS K +VFDA + P
Sbjct: 7 PVMLVDGYNVIGLWRHLQEMRDLQGFDIARSHLTETMVNFSAFHGYKTTLVFDAYVQATP 66
Query: 103 THKEEFI-GVDIVFPGET-CADAWIEKEIVALRED---GCPKVWVVTSDHLQQHAAYGAG 157
E + + F AD +IE++ R D ++ VVTSD QQ A G G
Sbjct: 67 AKAERITKNLKLYFTDHNETADTYIERQCGKYRRDPLRHLKRIIVVTSDRAQQLTAVGFG 126
Query: 158 AFVWSSKALVSEVSLII 174
A S+ AL EV +
Sbjct: 127 AEWLSATALEQEVEATL 143
>gi|336112780|ref|YP_004567547.1| hypothetical protein BCO26_0102 [Bacillus coagulans 2-6]
gi|335366210|gb|AEH52161.1| protein of unknown function DUF901 [Bacillus coagulans 2-6]
Length = 173
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 5/136 (3%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-M 98
N + +LLVDGYN+ G WP+L+ + L AR +L+E + E+ + KV+VVFDA +
Sbjct: 3 NKMNILLVDGYNIIGAWPELQ-KLKQKDLGAARDRLVEIMAEYQGYTDDKVIVVFDAYGV 61
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
GL K + V+++F E AD IEK + L + +++V TSD +Q +G G
Sbjct: 62 KGLE-KKYRYHKVEVIFTKENETADERIEKMAIKL-NNIRTQIYVATSDFTEQWQIFGQG 119
Query: 158 AFVWSSKALVSEVSLI 173
A S++ L+++V +I
Sbjct: 120 ALRISARELLTKVEVI 135
>gi|212637936|ref|YP_002314456.1| PIN domain/Zn-ribbon domain-containing protein [Anoxybacillus
flavithermus WK1]
gi|212559416|gb|ACJ32471.1| PIN domain containing protein [Anoxybacillus flavithermus WK1]
Length = 172
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS 99
+ + +L+VDGYN+ G WP+L L +AR +L+E++ E+ KV++VFDA +
Sbjct: 2 SKMDILIVDGYNIIGAWPEL-RELRDTDLSLARDRLVEKMAEYQAFTGCKVIIVFDAHLV 60
Query: 100 GLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
T K V+++F E AD IEK +L++ KV+V TSD+ +Q A +G GA
Sbjct: 61 QGTTKKYVDHQVEVIFTKENETADEHIEKLAKSLQQVRT-KVYVATSDYTEQWAIFGQGA 119
Query: 159 FVWSSKALVSEVSLI 173
S++ L+ EV +
Sbjct: 120 LRKSARELLIEVDAV 134
>gi|86609568|ref|YP_478330.1| hypothetical protein CYB_2120 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558110|gb|ABD03067.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 180
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ G WP L + +++AR +L+E L + R + VV+DA P
Sbjct: 9 LLVDGYNIIGAWPTLNQLARRSLMELARLRLVESLANYVAFRGYQATVVYDAYAQPTPAR 68
Query: 105 KEEF-IGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+E G++I++ GET AD+ IE+ L++DGC +V V TSD +QQ G A
Sbjct: 69 QERSPSGIEILYTSYGET-ADSCIERLCAQLQKDGC-RVRVATSDRVQQLVIGGYNAEWV 126
Query: 162 SSKALVSEV 170
S++ L EV
Sbjct: 127 SAEQLWDEV 135
>gi|422417735|ref|ZP_16494690.1| YacP [Listeria seeligeri FSL N1-067]
gi|313635071|gb|EFS01421.1| YacP [Listeria seeligeri FSL N1-067]
Length = 183
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L ++K R L+ AR KLIE + E+ +VVVVFDA
Sbjct: 16 QILLVDGYNVIGAWPEL--SYLKERDLEAARDKLIEWMAEYQSYTGYRVVVVFDAQFVRG 73
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K +++VF E AD +IE++ + + D ++ V TSD+ +Q A +G GA
Sbjct: 74 VKRKSVKHRIEVVFTHEDETADEFIEQKAIEWK-DARTQIIVATSDYTEQWAIFGQGALR 132
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 133 ISSRELLFEIQ 143
>gi|433447294|ref|ZP_20410891.1| hypothetical protein AF6_0090 [Anoxybacillus flavithermus
TNO-09.006]
gi|431999958|gb|ELK20865.1| hypothetical protein AF6_0090 [Anoxybacillus flavithermus
TNO-09.006]
Length = 169
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +L+VDGYN+ G WP+L L +AR +L+E++ E+ KV++VFDA +
Sbjct: 1 MDILIVDGYNIIGAWPEL-RELRDTDLSLARDRLVEKMAEYQAFTGCKVIIVFDAHLVQG 59
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
T K V+++F E AD IEK +L++ KV+V TSD+ +Q A +G GA
Sbjct: 60 TTKKYVDHQVEVIFTKENETADEHIEKLAKSLQQVRT-KVYVATSDYTEQWAIFGQGALR 118
Query: 161 WSSKALVSEVSLI 173
S++ L+ EV +
Sbjct: 119 KSARELLIEVDAV 131
>gi|289433596|ref|YP_003463468.1| hypothetical protein lse_0227 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|422420839|ref|ZP_16497792.1| YacP [Listeria seeligeri FSL S4-171]
gi|289169840|emb|CBH26378.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|313639755|gb|EFS04506.1| YacP [Listeria seeligeri FSL S4-171]
Length = 170
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L ++K R L+ AR KLIE + E+ +VVVVFDA
Sbjct: 3 QILLVDGYNVIGAWPEL--SYLKERDLEAARDKLIEWMAEYQSYTGYRVVVVFDAQFVRG 60
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K +++VF E AD +IE++ + + D ++ V TSD+ +Q A +G GA
Sbjct: 61 VKRKSVKHRIEVVFTHEDETADEFIEQKAIEWK-DARTQIIVATSDYTEQWAIFGQGALR 119
Query: 161 WSSKALVSEVS 171
SS+ L+ E+
Sbjct: 120 ISSRELLFEIQ 130
>gi|86605394|ref|YP_474157.1| hypothetical protein CYA_0681 [Synechococcus sp. JA-3-3Ab]
gi|86553936|gb|ABC98894.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
Length = 180
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ G WP L + +++AR +L+E L + R + VV+DA P
Sbjct: 9 LLVDGYNIIGAWPTLSQLARRSLMELARLRLVESLANYVAFRGYQATVVYDAYAQPTPAR 68
Query: 105 KEEF-IGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+E G++I++ GET AD+ IE+ L+ DGC +V V TSD +QQ G A
Sbjct: 69 QERSPSGIEILYTSYGET-ADSCIERLCAQLQRDGC-RVRVATSDRVQQLVIGGYNAEWV 126
Query: 162 SSKALVSEV 170
S++ L EV
Sbjct: 127 SAEQLWDEV 135
>gi|428305374|ref|YP_007142199.1| hypothetical protein Cri9333_1804 [Crinalium epipsammum PCC 9333]
gi|428246909|gb|AFZ12689.1| protein of unknown function DUF901 [Crinalium epipsammum PCC 9333]
Length = 182
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 7/134 (5%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
VLLVDGYNV G W L+ ++ L+ +RQ LIE LV +S + ++ ++FDA
Sbjct: 8 SVLLVDGYNVIGAWSSLQQTRVRDGLEASRQALIEALVNYSALEALETYIIFDAQYQDTR 67
Query: 103 THKE---EFIGVDIVFPGETCADAWIEKEIVALRED---GCPKVWVVTSDHLQQHAAYGA 156
++ E + + + G+T AD +IEK +LR D +V V TSD QQ G
Sbjct: 68 SYSEVITQNLSIYYTDFGQT-ADTYIEKFCASLRHDVSKSGQRVIVATSDRTQQLMVVGY 126
Query: 157 GAFVWSSKALVSEV 170
GA + S++ L V
Sbjct: 127 GAELMSAQQLFDAV 140
>gi|299821036|ref|ZP_07052924.1| tetracycline resistance protein [Listeria grayi DSM 20601]
gi|299816701|gb|EFI83937.1| tetracycline resistance protein [Listeria grayi DSM 20601]
Length = 170
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+LLVDGYNV G WP+L +K + L+ AR++L+E + E+ +VVVVFDA
Sbjct: 4 ILLVDGYNVIGAWPEL--SMLKAQNLEAARERLLEAMAEYKSYTGYRVVVVFDAQYVSGA 61
Query: 103 THKEEFIGVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K V+IVF + AD +IE++ + + + ++ V TSD+ +Q A +G GA
Sbjct: 62 KRKTNKHQVEIVFTKKDETADEYIERKAIEWK-NAKTQIIVATSDYTEQWAIFGQGALRI 120
Query: 162 SSKALVSEVS 171
SS+ L+ E+
Sbjct: 121 SSRELLFEIQ 130
>gi|428168285|gb|EKX37232.1| hypothetical protein GUITHDRAFT_145185 [Guillardia theta CCMP2712]
Length = 315
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 10/138 (7%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL--MSG 100
P+ VDGYNV G W KL+ G + AR L +E+ +F+ R + +V+DA+ +G
Sbjct: 128 PIFFVDGYNVIGQWNKLKKKRDNGDISGARDVLYDEISQFAHYRGCQCTIVYDAVGYTAG 187
Query: 101 LPTHKEEFI--GVDIVFPGETCADAWIE---KEIVALRE-DGC--PKVWVVTSDHLQQHA 152
LP + E GV++V+ + AD +I+ EI +E DG PKV++ +SD
Sbjct: 188 LPITQAEMTRAGVEVVYVRDESADTYIQARTAEISTWKEKDGIKPPKVYMCSSDRAISDI 247
Query: 153 AYGAGAFVWSSKALVSEV 170
A G GA V SS + E+
Sbjct: 248 ATGHGALVLSSALFIQEI 265
>gi|261417589|ref|YP_003251271.1| hypothetical protein GYMC61_0089 [Geobacillus sp. Y412MC61]
gi|297528464|ref|YP_003669739.1| hypothetical protein GC56T3_0088 [Geobacillus sp. C56-T3]
gi|319765247|ref|YP_004130748.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|375006900|ref|YP_004980530.1| PIN domain/Zn-ribbon domain-containing protein [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448236398|ref|YP_007400456.1| DUF901 family protein [Geobacillus sp. GHH01]
gi|261374046|gb|ACX76789.1| protein of unknown function DUF901 [Geobacillus sp. Y412MC61]
gi|297251716|gb|ADI25162.1| protein of unknown function DUF901 [Geobacillus sp. C56-T3]
gi|317110113|gb|ADU92605.1| protein of unknown function DUF901 [Geobacillus sp. Y412MC52]
gi|359285746|gb|AEV17430.1| PIN domain containing protein [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445205240|gb|AGE20705.1| DUF901 family protein [Geobacillus sp. GHH01]
Length = 170
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +L+VDGYN+ G WP+L +G L AR LIE++ ++ VV+VFDA +
Sbjct: 1 MNILIVDGYNIIGAWPELRRLKEEGDLAAARDLLIEKMADYKGFTGDHVVIVFDAHLVQG 60
Query: 102 PTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + VD++F E AD IE+ L + KV+V TSD+ +Q +G GA
Sbjct: 61 NEKKYKHYDVDVIFTKEHETADERIERLAKTLM-NARTKVYVATSDYTEQWTVFGQGALR 119
Query: 161 WSSKALVSEVSLI 173
S++ L+ EV +
Sbjct: 120 KSARELLDEVETV 132
>gi|37522562|ref|NP_925939.1| hypothetical protein glr2993 [Gloeobacter violaceus PCC 7421]
gi|35213563|dbj|BAC90934.1| glr2993 [Gloeobacter violaceus PCC 7421]
Length = 174
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP- 102
+LLVDGYNV G WP+L + L+ AR +L+E+L ++ R + V+VFDA + P
Sbjct: 4 ILLVDGYNVVGAWPRLARLRDRHSLEAARNELVEQLAGYASFRGYRAVLVFDAQLVTSPL 63
Query: 103 THKEEFIGVDIVFPG-ETCADAWIEK-EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
E +++ F E AD++IE+ LRE+ +V V TSD QQ GA
Sbjct: 64 VRASETPHLEVCFTDYEQTADSFIEQYSYQLLRENRRRRVMVATSDRAQQVLVLAQGADW 123
Query: 161 WSSKALVSEV 170
SS+ L+ EV
Sbjct: 124 LSSEQLLKEV 133
>gi|356564438|ref|XP_003550461.1| PREDICTED: uncharacterized protein LOC100793151 [Glycine max]
Length = 128
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 128 EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
++ AL+EDGCPKVWVVTSDH Q AA+GAGAF+WS KALV+E+
Sbjct: 37 KVAALKEDGCPKVWVVTSDHCHQQAAHGAGAFIWSCKALVTEI 79
>gi|407978596|ref|ZP_11159425.1| hypothetical protein BA1_05312 [Bacillus sp. HYC-10]
gi|407414792|gb|EKF36418.1| hypothetical protein BA1_05312 [Bacillus sp. HYC-10]
Length = 170
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +LLVDGYN+ G WP+L+ H + + AR LI+ L E+ +V+VVFDA M
Sbjct: 1 MDILLVDGYNMIGAWPRLQ-HLKENSFEEARDVLIQHLAEYQAYTGYRVIVVFDAHMVKG 59
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K V+++F E AD IEK L + ++ V TSD+ +Q A +G GA
Sbjct: 60 IEKKRTNHRVEVIFTRENETADERIEKLAQDL-NNIRTQIHVATSDYTEQWAIFGQGALR 118
Query: 161 WSSKALVSEVSLI 173
S++ L+ E+ +I
Sbjct: 119 KSARELLREIEVI 131
>gi|389573530|ref|ZP_10163604.1| yacP [Bacillus sp. M 2-6]
gi|388426845|gb|EIL84656.1| yacP [Bacillus sp. M 2-6]
Length = 170
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +LLVDGYN+ G WP+L+ H + + AR LI+ L E+ +V+VVFDA M
Sbjct: 1 MDILLVDGYNMIGAWPRLQ-HLKENSFEEARDVLIQHLAEYQAYTGYRVIVVFDAHMVKG 59
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K V+++F E AD IEK L + ++ V TSD+ +Q A +G GA
Sbjct: 60 IEKKRTNHRVEVIFTRENETADERIEKLAQDL-NNIRTQIHVATSDYTEQWAIFGQGALR 118
Query: 161 WSSKALVSEVSLI 173
S++ L+ E+ +I
Sbjct: 119 KSARELLREIEVI 131
>gi|297582429|ref|YP_003698209.1| hypothetical protein [Bacillus selenitireducens MLS10]
gi|297140886|gb|ADH97643.1| protein of unknown function DUF901 [Bacillus selenitireducens
MLS10]
Length = 169
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM-SGLP 102
+LLVDGYN+ G W +L + K L+ AR +LIE++ E+ +V++VFDA M GL
Sbjct: 4 ILLVDGYNIIGDWVELRD-LQKTDLEGARDQLIEKMAEYQAYTGTEVIIVFDAHMVPGLG 62
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
F V+I++ E AD IEK + L+ K++V TSD ++Q + +GA+
Sbjct: 63 KSYRNF-SVEILYTREKETADERIEKLVTELKRVDT-KIYVATSDFVEQRVIFASGAYRK 120
Query: 162 SSKALVSEVS 171
S++ L +EVS
Sbjct: 121 SARELRTEVS 130
>gi|56418623|ref|YP_145941.1| hypothetical protein GK0088 [Geobacillus kaustophilus HTA426]
gi|56378465|dbj|BAD74373.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 170
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +L+VDGYN+ G WP+L +G L AR LIE++ ++ VV+VFDA +
Sbjct: 1 MNILIVDGYNMIGAWPELRRLKEEGDLAAARDLLIEKMADYKGFTGDHVVIVFDAHLVQG 60
Query: 102 PTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + VD++F E AD IE+ L + KV+V TSD+ +Q +G GA
Sbjct: 61 NEKKYKHYDVDVIFTKEHETADERIERLAKTLM-NARTKVYVATSDYTEQWTVFGQGALR 119
Query: 161 WSSKALVSEVSLI 173
S++ L+ EV +
Sbjct: 120 KSARELLDEVETV 132
>gi|170077699|ref|YP_001734337.1| hypothetical protein SYNPCC7002_A1079 [Synechococcus sp. PCC 7002]
gi|169885368|gb|ACA99081.1| conserved hypothetical protein (DUF901) [Synechococcus sp. PCC
7002]
Length = 180
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G W +L+ + L++AR +LIE L+ ++ + VVFDA P+
Sbjct: 9 LLLVDGYNVIGAWQELKATRDRHGLEMARDELIEVLINYASHNCYRTKVVFDAHYQQTPS 68
Query: 104 HKEE---FIGVDIVFPGETCADAWIEKEIVALRED-GCP-KVWVVTSDHLQQHAAYGAGA 158
+EE F+ ET AD +IEK A + D P +V VVTSD Q+H G GA
Sbjct: 69 QEEEHTQFVSAYYTAFSET-ADTYIEKACAAFQHDYNTPRRVIVVTSDQAQRHTVVGYGA 127
Query: 159 FVWSSKALVSEVS 171
SS L S+V+
Sbjct: 128 EWMSSLKLQSDVA 140
>gi|223934292|ref|ZP_03626215.1| protein of unknown function DUF901 [Streptococcus suis 89/1591]
gi|302024498|ref|ZP_07249709.1| hypothetical protein Ssui0_08109 [Streptococcus suis 05HAS68]
gi|330833533|ref|YP_004402358.1| hypothetical protein SSUST3_1759 [Streptococcus suis ST3]
gi|386584943|ref|YP_006081346.1| hypothetical protein SSUD9_1936 [Streptococcus suis D9]
gi|223897039|gb|EEF63477.1| protein of unknown function DUF901 [Streptococcus suis 89/1591]
gi|329307756|gb|AEB82172.1| protein of unknown function DUF901 [Streptococcus suis ST3]
gi|353737089|gb|AER18098.1| protein of unknown function DUF901 [Streptococcus suis D9]
Length = 173
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
VL+VDGYN+ +W + F KG LD AR L+ L ++ +++V+ VFDA + GL
Sbjct: 5 VLIVDGYNMIAFWQATKQDFKKGDLDAARTTLLRTLSHYAAFEQIEVICVFDAHHVPGLR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V ++F E AD++IE+ L D +V V TSD +Q + GA
Sbjct: 65 QQYDEF-KVSVIFTEEEETADSYIERLSAQLNSDRRKQVSVATSDLNEQWVVFSQGALRV 123
Query: 162 SSKALVSEVSLI 173
S++ L +I
Sbjct: 124 SARELEERTRII 135
>gi|389857418|ref|YP_006359661.1| hypothetical protein SSUST1_1796 [Streptococcus suis ST1]
gi|353741136|gb|AER22143.1| protein of unknown function DUF901 [Streptococcus suis ST1]
Length = 173
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
VL+VDGYN+ +W + F KG LD AR L+ L ++ +++V+ VFDA + GL
Sbjct: 5 VLIVDGYNMIAFWQATKQDFKKGDLDAARTTLLRTLSHYATFEQIEVICVFDAHHVPGLR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V ++F E AD++IE+ L D +V V TSD +Q + GA
Sbjct: 65 QQYDEF-KVSVIFTEEEETADSYIERLSAQLNSDRRKQVSVATSDLNEQWVVFSQGALRV 123
Query: 162 SSKALVSEVSLI 173
S++ L +I
Sbjct: 124 SARELEERTRVI 135
>gi|317126838|ref|YP_004093120.1| hypothetical protein Bcell_0098 [Bacillus cellulosilyticus DSM
2522]
gi|315471786|gb|ADU28389.1| protein of unknown function DUF901 [Bacillus cellulosilyticus DSM
2522]
Length = 170
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 3/128 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP+L++ + L+ AR KLIE + E+ ++V V+FDA M
Sbjct: 4 VLLVDGYNMIGDWPELKDLQLTD-LEGARDKLIEHMAEYQAYTGIEVTVIFDAHMVPGLG 62
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
K + ++I++ E AD IEK + L+ +++V TSD ++Q + +GAF S
Sbjct: 63 KKYQNYRINIIYTREKETADERIEKLVKELKRVDT-QIYVATSDFVEQRVIFASGAFRKS 121
Query: 163 SKALVSEV 170
++ L +EV
Sbjct: 122 ARELRTEV 129
>gi|415886297|ref|ZP_11548120.1| PIN domain containing protein [Bacillus methanolicus MGA3]
gi|387588950|gb|EIJ81271.1| PIN domain containing protein [Bacillus methanolicus MGA3]
Length = 168
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +L+VDGYN+ G WP+L L AR +LIE + E+ +V++VFDA + G
Sbjct: 1 MDILIVDGYNIIGAWPEL-RALKNIDLAAARDRLIESMAEYQAYTGYRVIIVFDAYFVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + F V+++F E AD IEK ++L + ++ V TSD+ +Q A +G GA
Sbjct: 60 IEKKYKNF-NVEVIFTRENETADERIEKLAISL-SNRKTQIHVATSDYTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L++E+ +I
Sbjct: 118 RKSARELLTEMEVI 131
>gi|421875254|ref|ZP_16306848.1| conserved hypothetical protein [Brevibacillus laterosporus GI-9]
gi|372455722|emb|CCF16397.1| conserved hypothetical protein [Brevibacillus laterosporus GI-9]
Length = 190
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Query: 29 SYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREV 88
SY+ + +L+VDGYN+ G WP+L + ++D AR LI +L E+ +
Sbjct: 10 SYLEENEMAKRKSKQLLIVDGYNIIGAWPQLRVLKDQDQMDEARDILISQLAEYQSYSGI 69
Query: 89 KVVVVFDAL-MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSD 146
KV+VVFDA + G+ +E+F +++ F + AD IE+ + E +++V TSD
Sbjct: 70 KVIVVFDAYKIPGIGKKQEDF-KIEVYFTKKKETADEKIERLVHEFFEKN-RQIYVATSD 127
Query: 147 HLQQHAAYGAGAFVWSSKALVSEV 170
+ Q +G GA S++ L+ EV
Sbjct: 128 YTSQRVIFGQGALRKSARELLLEV 151
>gi|146319555|ref|YP_001199267.1| hypothetical protein SSU05_1901 [Streptococcus suis 05ZYH33]
gi|146321749|ref|YP_001201460.1| hypothetical protein SSU98_1902 [Streptococcus suis 98HAH33]
gi|253752558|ref|YP_003025699.1| hypothetical protein SSUSC84_1718 [Streptococcus suis SC84]
gi|253754384|ref|YP_003027525.1| hypothetical protein SSU1695 [Streptococcus suis P1/7]
gi|253756318|ref|YP_003029458.1| hypothetical protein SSUBM407_1766 [Streptococcus suis BM407]
gi|386578707|ref|YP_006075113.1| hypothetical protein [Streptococcus suis GZ1]
gi|386580780|ref|YP_006077185.1| hypothetical protein SSUJS14_1858 [Streptococcus suis JS14]
gi|386588978|ref|YP_006085379.1| hypothetical protein SSUA7_1720 [Streptococcus suis A7]
gi|403062320|ref|YP_006650536.1| hypothetical protein YYK_08135 [Streptococcus suis S735]
gi|145690361|gb|ABP90867.1| hypothetical protein SSU05_1901 [Streptococcus suis 05ZYH33]
gi|145692555|gb|ABP93060.1| hypothetical protein SSU98_1902 [Streptococcus suis 98HAH33]
gi|251816847|emb|CAZ52494.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818782|emb|CAZ56622.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|251820630|emb|CAR47390.1| conserved hypothetical protein [Streptococcus suis P1/7]
gi|292559170|gb|ADE32171.1| conserved hypothetical protein [Streptococcus suis GZ1]
gi|319758972|gb|ADV70914.1| hypothetical protein SSUJS14_1858 [Streptococcus suis JS14]
gi|354986139|gb|AER45037.1| hypothetical protein SSUA7_1720 [Streptococcus suis A7]
gi|402809646|gb|AFR01138.1| hypothetical protein YYK_08135 [Streptococcus suis S735]
Length = 173
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
VL+VDGYN+ +W + F KG LD AR L+ L ++ +++V+ VFDA + GL
Sbjct: 5 VLIVDGYNMIAFWQATKQDFKKGDLDAARTTLLRTLSHYAAFEQIEVICVFDAHHVPGLR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V ++F E AD++IE+ L D +V V TSD +Q + GA
Sbjct: 65 QQYDEF-KVSVIFTEEEETADSYIERLSAQLNSDRRKQVSVATSDLNEQWVVFSQGALRV 123
Query: 162 SSKALVSEVSLI 173
S++ L +I
Sbjct: 124 SARELEERTKVI 135
>gi|154684615|ref|YP_001419776.1| hypothetical protein RBAM_001220 [Bacillus amyloliquefaciens FZB42]
gi|375360787|ref|YP_005128826.1| hypothetical protein BACAU_0097 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384263727|ref|YP_005419434.1| putative ribonuclease with PIN and NYN domains [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385267124|ref|ZP_10045211.1| YacP-like NYN domain-containing protein [Bacillus sp. 5B6]
gi|387896625|ref|YP_006326921.1| hypothetical protein MUS_0108 [Bacillus amyloliquefaciens Y2]
gi|394994768|ref|ZP_10387475.1| YacP [Bacillus sp. 916]
gi|421733029|ref|ZP_16172144.1| hypothetical protein WYY_18174 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429503631|ref|YP_007184815.1| hypothetical protein B938_00500 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|451348513|ref|YP_007447144.1| hypothetical protein KSO_018915 [Bacillus amyloliquefaciens IT-45]
gi|452854160|ref|YP_007495843.1| putative ribonuclease with PIN and NYN domains [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|126363076|emb|CAM35803.1| hypothetical YcaP protein [Bacillus amyloliquefaciens FZB42]
gi|154350466|gb|ABS72545.1| YacP [Bacillus amyloliquefaciens FZB42]
gi|371566781|emb|CCF03631.1| putative protein yacP [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|380497080|emb|CCG48118.1| putative ribonuclease with PIN and NYN domains [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385151620|gb|EIF15557.1| YacP-like NYN domain-containing protein [Bacillus sp. 5B6]
gi|387170735|gb|AFJ60196.1| conserved hypothetical protein YacP [Bacillus amyloliquefaciens Y2]
gi|393804335|gb|EJD65747.1| YacP [Bacillus sp. 916]
gi|407073070|gb|EKE46068.1| hypothetical protein WYY_18174 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429485221|gb|AFZ89145.1| hypothetical protein B938_00500 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|449852271|gb|AGF29263.1| hypothetical protein KSO_018915 [Bacillus amyloliquefaciens IT-45]
gi|452078420|emb|CCP20170.1| putative ribonuclease with PIN and NYN domains [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 170
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +LLVDGYN+ G WP+L++ + AR LI+++ E+ ++V+VVFDA +
Sbjct: 1 MDILLVDGYNMIGAWPQLKD-LKANSFEEARDVLIQKMAEYQSYTGIRVIVVFDAHLVKG 59
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K+ V+++F E AD IEK AL + ++ V TSD+ +Q A +G GA
Sbjct: 60 IEKKQTNHRVEVIFTRENETADERIEKLAQAL-NNIATQIHVATSDYTEQWAIFGQGALR 118
Query: 161 WSSKALVSEVSLI 173
S++ L+ EV I
Sbjct: 119 KSARELLREVDTI 131
>gi|381183090|ref|ZP_09891854.1| hypothetical protein KKC_07342 [Listeriaceae bacterium TTU M1-001]
gi|380317013|gb|EIA20368.1| hypothetical protein KKC_07342 [Listeriaceae bacterium TTU M1-001]
Length = 170
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP+L N L++AR LI ++ E+ +V+VFDA
Sbjct: 4 ILLVDGYNVIGAWPELSN-LKDYDLEMARNSLIAKMAEYQSYTGYDIVIVFDAQYVRGIQ 62
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
K E V IVF E AD +IE++ + + + ++ V TSD+ +Q A +G GA S
Sbjct: 63 RKMERHKVKIVFTKEDETADEYIERKAIEWK-NAKTQIMVATSDYTEQWAIFGQGALRIS 121
Query: 163 SKALVSEVS 171
S+ L E+
Sbjct: 122 SRELFFEIQ 130
>gi|365903455|ref|ZP_09441278.1| hypothetical protein LmalK3_08001 [Lactobacillus malefermentans
KCTC 3548]
Length = 179
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP+L+ ++ RL+ AR +LI+ +VE+ R +++VVVFDA+ T
Sbjct: 5 LLIVDAYNLIGSWPELKQLKLQDRLEDARDRLIQMMVEYRKYRAIEIVVVFDAMYVPGVT 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ G+++V+ + AD++IE + ++ +V V T+D +Q + GA
Sbjct: 65 QNKQYRGLEVVWTAKNETADSYIEA-LAKEKQSRLLQVTVATNDQAEQWMIFSEGALRIP 123
Query: 163 SKALVSEVSL 172
L+ ++ L
Sbjct: 124 GDELLGDIHL 133
>gi|417092067|ref|ZP_11956801.1| protein of unknown function DUF901 [Streptococcus suis R61]
gi|353532636|gb|EHC02305.1| protein of unknown function DUF901 [Streptococcus suis R61]
Length = 173
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
VL+VDGYN+ +W + F KG LD AR L+ L ++ +++V+ VFDA + GL
Sbjct: 5 VLIVDGYNMIAFWQTTKQDFKKGDLDAARTTLLRTLSHYAAFEQIEVICVFDAHHVPGLR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V ++F E AD++IE+ L D +V V TSD +Q + GA
Sbjct: 65 QQYDEF-KVSVIFTEEEETADSYIERLSSQLNSDRRKQVSVATSDLNEQWVVFSQGALRV 123
Query: 162 SSKALVSEVSLI 173
S++ L +I
Sbjct: 124 SARELEERTRVI 135
>gi|308171988|ref|YP_003918693.1| ribonuclease [Bacillus amyloliquefaciens DSM 7]
gi|384157710|ref|YP_005539783.1| ribonuclease with PIN and NYN domains [Bacillus amyloliquefaciens
TA208]
gi|384162504|ref|YP_005543883.1| ribonuclease with PIN and NYN domains [Bacillus amyloliquefaciens
LL3]
gi|384166726|ref|YP_005548104.1| ribonuclease with PIN and NYN domains [Bacillus amyloliquefaciens
XH7]
gi|307604852|emb|CBI41223.1| putative ribonuclease with PIN and NYN domains [Bacillus
amyloliquefaciens DSM 7]
gi|328551798|gb|AEB22290.1| ribonuclease with PIN and NYN domains [Bacillus amyloliquefaciens
TA208]
gi|328910059|gb|AEB61655.1| putative ribonuclease with PIN and NYN domains [Bacillus
amyloliquefaciens LL3]
gi|341826005|gb|AEK87256.1| putative ribonuclease with PIN and NYN domains [Bacillus
amyloliquefaciens XH7]
Length = 170
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +LLVDGYN+ G WP+L++ + AR LI+++ E+ +KV+VVFDA +
Sbjct: 1 MDILLVDGYNMIGAWPQLKD-LKANSFEEARDVLIQKMAEYQSYTGIKVIVVFDAHLVKG 59
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K V+++F E AD IEK AL + ++ V TSD+ +Q A +G GA
Sbjct: 60 IEKKHTNHRVEVIFTRENETADERIEKLAQAL-NNIATQIHVATSDYTEQWAIFGQGALR 118
Query: 161 WSSKALVSEVSLI 173
S++ L+ EV I
Sbjct: 119 KSARELLREVDAI 131
>gi|398303909|ref|ZP_10507495.1| ribonuclease with PIN and NYN domains [Bacillus vallismortis
DV1-F-3]
Length = 170
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G WP+L++ + AR LI+++ E+ +V+VVFDA L+ G
Sbjct: 1 MDILLVDGYNMIGAWPQLKD-LKANSFEEARNVLIQKMAEYQSYTGNRVIVVFDAHLVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
L K+ V+++F E AD IEK AL + ++ V TSD+ +Q A +G GA
Sbjct: 60 LE-KKQTNHRVEVIFTKENETADERIEKLAQAL-NNIATQIHVATSDYTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L+ EV I
Sbjct: 118 RKSARELLREVEAI 131
>gi|399055787|ref|ZP_10743437.1| putative RNA-binding protein containing a PIN domain [Brevibacillus
sp. CF112]
gi|398046650|gb|EJL39244.1| putative RNA-binding protein containing a PIN domain [Brevibacillus
sp. CF112]
Length = 174
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 4/130 (3%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-M 98
A +L+VDGYN+ G WP+L + R+D AR +LI ++ E+ +KV++VFDA +
Sbjct: 5 KAKQLLIVDGYNIIGAWPELRLLKDQERMDEARDRLISKMAEYQSYTGIKVIIVFDAYNV 64
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
G+ E+++ V+I F + AD IE ++V+ +++V TSD+ Q +G G
Sbjct: 65 PGIGRQMEDYL-VEIYFTKKKETADEKIE-QLVSEFHQKNRQIYVATSDYTSQRVIFGQG 122
Query: 158 AFVWSSKALV 167
A S++ L+
Sbjct: 123 ALRKSARELL 132
>gi|410454407|ref|ZP_11308346.1| PIN domain/Zn-ribbon domain-containing protein [Bacillus
bataviensis LMG 21833]
gi|409932222|gb|EKN69189.1| PIN domain/Zn-ribbon domain-containing protein [Bacillus
bataviensis LMG 21833]
Length = 169
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSG 100
+ +LLVDGYN+ G WP+L +K R L AR +L+E + E+ +V+VVFDA
Sbjct: 1 MDILLVDGYNIIGAWPEL--RALKERDLPAARDRLVERMAEYQAFSGYRVIVVFDAYYVQ 58
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
K + V+++F E AD IEK ++L + ++ V TSD +Q A +G GA
Sbjct: 59 GIEKKYKNHKVEVIFTKENETADERIEKMAISL-SNRRTQIHVATSDFTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L+ E+S I
Sbjct: 118 RKSARELLLEMSTI 131
>gi|398813153|ref|ZP_10571855.1| putative RNA-binding protein containing a PIN domain [Brevibacillus
sp. BC25]
gi|398039314|gb|EJL32452.1| putative RNA-binding protein containing a PIN domain [Brevibacillus
sp. BC25]
Length = 174
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 41 AVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MS 99
A +L+VDGYN+ G WP L + R+D AR +LI ++ E+ VKV++VFDA +
Sbjct: 6 AKQLLIVDGYNIIGAWPDLRLLKDQERMDEARDQLIAKMAEYQSYTGVKVIIVFDAYNVP 65
Query: 100 GLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
G+ E+F V++ F + AD IE ++V+ + +++V TSD+ Q +G GA
Sbjct: 66 GIGRQMEDF-QVEVYFTKKKETADEKIE-QLVSQFHNKNRQIYVATSDYTSQRVIFGQGA 123
Query: 159 FVWSSKALV 167
S++ L+
Sbjct: 124 LRKSARELL 132
>gi|222530010|ref|YP_002573892.1| hypothetical protein Athe_2042 [Caldicellulosiruptor bescii DSM
6725]
gi|312621715|ref|YP_004023328.1| hypothetical protein Calkro_0615 [Caldicellulosiruptor
kronotskyensis 2002]
gi|222456857|gb|ACM61119.1| protein of unknown function DUF901 [Caldicellulosiruptor bescii DSM
6725]
gi|312202182|gb|ADQ45509.1| protein of unknown function DUF901 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 168
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L+VDGYN W L + LD AR+KLI+ L +FS + K+ +VFD+ L+ G
Sbjct: 3 LMVDGYNFINAWDYLRK-IAEDDLDSARKKLIDILADFSGYKGYKITIVFDSHLVKGAMR 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
KE F V+IVF E AD +IE+ + + K+ VVTSD+L+Q G GA
Sbjct: 62 KKETFSNVEIVFTKEGETADNYIEQYV--YKNSKNEKIGVVTSDYLEQLIILGDGALRIP 119
Query: 163 SKALVSEV 170
+ L+ E+
Sbjct: 120 PRELIYEI 127
>gi|358061010|ref|ZP_09147696.1| hypothetical protein SS7213T_12162 [Staphylococcus simiae CCM 7213]
gi|357256533|gb|EHJ06895.1| hypothetical protein SS7213T_12162 [Staphylococcus simiae CCM 7213]
Length = 174
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 8/126 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L++DGYN+ G KL + K L+ ARQ+L++ + +S + +V+ VFDA SG+
Sbjct: 6 LIIDGYNMIGQSSKL-SAIAKENLEEARQQLLDTIANYSAVITDEVICVFDAYEQSGI-- 62
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ E+I GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+
Sbjct: 63 -EREYIYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSEQHAIFGSGAYR 121
Query: 161 WSSKAL 166
SS+ +
Sbjct: 122 ISSREM 127
>gi|427718990|ref|YP_007066984.1| hypothetical protein Cal7507_3759 [Calothrix sp. PCC 7507]
gi|427351426|gb|AFY34150.1| protein of unknown function DUF901 [Calothrix sp. PCC 7507]
Length = 186
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
VLLVDGYN+ G WP L+ L+ AR +L+E + +S + +VFDA
Sbjct: 8 AVLLVDGYNIIGAWPCLKKTRDNAGLEAARGELVEAMTSYSSFQGYDTQIVFDAQYHNAS 67
Query: 103 THKE---EFIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYG 155
++KE E + V G+T AD +IEK +LR + ++ V TSD QQ G
Sbjct: 68 SNKEIITELLSVHYTDFGQT-ADTYIEKTCASLRYQIAQSRIARMIVATSDRAQQLTVQG 126
Query: 156 AGAFVWSSKALVSEVSLII 174
GA S++ L EV +
Sbjct: 127 YGAEWLSAQQLCGEVETTV 145
>gi|308802033|ref|XP_003078330.1| 3'-5' exonuclease, putative (ISS) [Ostreococcus tauri]
gi|116056782|emb|CAL53071.1| 3'-5' exonuclease, putative (ISS) [Ostreococcus tauri]
Length = 1013
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 42 VPVLLVDGYNVCGYWPK----LENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL 97
PVLL+DGYNVCG F KG +D AR L +V+F +VV+V+DA
Sbjct: 72 APVLLIDGYNVCGLGEDGVEAASEAFAKGDMDAARVALTNAVVDFKSFSGYRVVLVWDAD 131
Query: 98 MSGLPTHKE-----EFIGVDIVFPGETCADAWIEKEIVALRE-DGCPKVWVVTSDHLQQH 151
+ E + G +V+ + AD+WIE + +E D V+V TSD
Sbjct: 132 RTKDKDEDEIEGDLDADGFQVVYSVKNDADSWIEARVAKEKEIDENKAVYVATSDGALSS 191
Query: 152 AAYGAGAFVWSSKALVSEV 170
A G+GA+V ++KA V E+
Sbjct: 192 IARGSGAYVITAKAFVEEL 210
>gi|433543312|ref|ZP_20499722.1| hypothetical protein D478_06374 [Brevibacillus agri BAB-2500]
gi|432185441|gb|ELK42932.1| hypothetical protein D478_06374 [Brevibacillus agri BAB-2500]
Length = 174
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 4/130 (3%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-M 98
A +L+VDGYN+ G WP+L + R+D AR +LI ++ E+ +KV++VFDA +
Sbjct: 5 KAKQLLIVDGYNIIGAWPELRLLKDQERMDEARDQLISKMAEYQSYTGIKVIIVFDAYNV 64
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
G+ E+++ V+I F + AD IE ++V+ +++V TSD+ Q +G G
Sbjct: 65 PGIGRQMEDYL-VEIYFTKKKETADEKIE-QLVSEFHQKNRQIYVATSDYTSQRVIFGQG 122
Query: 158 AFVWSSKALV 167
A S++ L+
Sbjct: 123 ALRKSARELL 132
>gi|157690880|ref|YP_001485342.1| hypothetical protein BPUM_0082 [Bacillus pumilus SAFR-032]
gi|194017443|ref|ZP_03056054.1| YacP [Bacillus pumilus ATCC 7061]
gi|157679638|gb|ABV60782.1| hypothetical protein YacP [Bacillus pumilus SAFR-032]
gi|194010715|gb|EDW20286.1| YacP [Bacillus pumilus ATCC 7061]
Length = 170
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +LLVDGYN+ G WP+L+ H + + AR LI+ L E+ +V+VVFDA M
Sbjct: 1 MDILLVDGYNMIGAWPRLQ-HLKENSFEEARDILIQNLAEYQAYTGYRVIVVFDAHMVKG 59
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K V+++F E AD IEK L + ++ V TSD +Q A +G GA
Sbjct: 60 IEKKRINHRVEVIFTRENETADERIEKLAQDL-NNIRTQIHVATSDFTEQWAIFGQGALR 118
Query: 161 WSSKALVSEVSLI 173
S++ L+ E+ +I
Sbjct: 119 KSARELLREIEVI 131
>gi|339006563|ref|ZP_08639138.1| hypothetical protein BRLA_c03050 [Brevibacillus laterosporus LMG
15441]
gi|338775772|gb|EGP35300.1| hypothetical protein BRLA_c03050 [Brevibacillus laterosporus LMG
15441]
Length = 174
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VDGYN+ G WP+L + ++D AR LI +L E+ +KV+VVFDA + G+
Sbjct: 9 LLIVDGYNIIGAWPQLRVLKDQDQMDEARDILISQLAEYQSYSGIKVIVVFDAYKIPGIG 68
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+E+F +++ F + AD IE+ + E +++V TSD+ Q +G GA
Sbjct: 69 KKQEDF-KIEVYFTKKKETADEKIERLVHEFFEKN-RQIYVATSDYTSQRVIFGQGALRK 126
Query: 162 SSKALVSEV 170
S++ L+ EV
Sbjct: 127 SARELLLEV 135
>gi|387928129|ref|ZP_10130807.1| PIN domain containing protein [Bacillus methanolicus PB1]
gi|387587715|gb|EIJ80037.1| PIN domain containing protein [Bacillus methanolicus PB1]
Length = 168
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +++VDGYN+ G WP+L L AR +LI+ + E+ +V++VFDA + G
Sbjct: 1 MDIMIVDGYNIIGAWPEL-RALKNSDLAAARDRLIDNMAEYQAYTGYRVIIVFDAQFVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + F V+++F E AD IEK ++L + ++ V TSD+ +Q A +G GA
Sbjct: 60 VEKKYKNF-KVEVIFTRENETADERIEKLAISL-SNRKTQIHVATSDYTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L++E+ +I
Sbjct: 118 RKSARELLTEMEVI 131
>gi|70727475|ref|YP_254391.1| hypothetical protein SH2476 [Staphylococcus haemolyticus JCSC1435]
gi|68448201|dbj|BAE05785.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 175
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L++DGYN+ G P+L K L AR++L++ + ++ + ++V VFDA SG+
Sbjct: 6 LIIDGYNMIGQSPEL-GKIAKDNLQEAREQLLDAIANYNAVVADEIVCVFDAYEQSGI-- 62
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ E+I GV VF E AD++IE+ + L + VVTSD +QHA +GAGA+
Sbjct: 63 -EREYIYHGVKTVFTKEKETADSYIERYVYNLYNKHTTHITVVTSDMSEQHAIFGAGAYR 121
Query: 161 WSSKAL 166
SS+ +
Sbjct: 122 VSSREM 127
>gi|86606395|ref|YP_475158.1| hypothetical protein CYA_1740 [Synechococcus sp. JA-3-3Ab]
gi|86554937|gb|ABC99895.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
Length = 180
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP L+ + LD+AR +L+E L + R + VV+DA P
Sbjct: 8 VLLVDGYNIIGAWPTLKKLARRSLLDLARLRLVESLASYVAFRGYRATVVYDAYTQPTPA 67
Query: 104 HKEEF-IGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+E G++I + GET ADA IE+ L+ +V V TSD +QQ G A
Sbjct: 68 RQERSPSGIEIFYTAYGET-ADACIERLCAQLQAKAY-RVRVATSDRVQQWVIGGYNAEW 125
Query: 161 WSSKALVSEV 170
S++ L +EV
Sbjct: 126 LSAEQLWAEV 135
>gi|354568341|ref|ZP_08987506.1| protein of unknown function DUF901 [Fischerella sp. JSC-11]
gi|353540704|gb|EHC10177.1| protein of unknown function DUF901 [Fischerella sp. JSC-11]
Length = 183
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
V LVDGYN+ G W L+ + L+ AR +LIE L ++S + + +VFDA +
Sbjct: 9 VFLVDGYNIIGTWSCLKRTRDQAGLEAARWELIEALTDYSAFQGYETQIVFDAQYQNASS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYGA 156
+KE E + V G+T AD +IEK +LR + P+V V TSD QQ G
Sbjct: 69 NKEVITELVSVYYTDFGQT-ADTYIEKACASLRPAIAQSLIPRVIVATSDRAQQLMVQGY 127
Query: 157 GAFVWSSKALVSEVSLII 174
GA S++ L EV +
Sbjct: 128 GAEWLSAQQLCYEVQATV 145
>gi|258422621|ref|ZP_05685527.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|417890338|ref|ZP_12534415.1| hypothetical protein SA21200_2130 [Staphylococcus aureus subsp.
aureus 21200]
gi|418282541|ref|ZP_12895306.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21202]
gi|418308154|ref|ZP_12919807.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21194]
gi|418559644|ref|ZP_13124179.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21252]
gi|418888433|ref|ZP_13442570.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418993247|ref|ZP_13540886.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG290]
gi|257847193|gb|EEV71201.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|341855065|gb|EGS95919.1| hypothetical protein SA21200_2130 [Staphylococcus aureus subsp.
aureus 21200]
gi|365169542|gb|EHM60788.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21202]
gi|365241634|gb|EHM82378.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21194]
gi|371974487|gb|EHO91817.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21252]
gi|377747210|gb|EHT71176.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG290]
gi|377754885|gb|EHT78790.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1524]
Length = 174
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L N K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-NAIAKENLEEARMQLIDAIANYNAVISDEIICVFDAYDQSGVER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|311070744|ref|YP_003975667.1| ribonuclease with PIN and NYN domains [Bacillus atrophaeus 1942]
gi|419823191|ref|ZP_14346751.1| putative ribonuclease with PIN and NYN domains [Bacillus atrophaeus
C89]
gi|310871261|gb|ADP34736.1| putative ribonuclease with PIN and NYN domains [Bacillus atrophaeus
1942]
gi|388472722|gb|EIM09485.1| putative ribonuclease with PIN and NYN domains [Bacillus atrophaeus
C89]
Length = 170
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G WP+L++ + AR LI+++ E+ +V+VVFDA L+ G
Sbjct: 1 MDILLVDGYNMIGAWPQLKD-LKANSFEEARDVLIQKMAEYQSYTGNRVIVVFDAHLVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + V+++F E AD IEK AL + ++ V TSD+ +Q A +G GA
Sbjct: 60 IEKKRTNH-RVEVIFTKENETADERIEKLAQAL-NNIATQIHVATSDYTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L+ EV I
Sbjct: 118 RKSARELLREVETI 131
>gi|392969842|ref|ZP_10335254.1| putative uncharacterized protein [Staphylococcus equorum subsp.
equorum Mu2]
gi|403047545|ref|ZP_10903013.1| hypothetical protein SOJ_26220 [Staphylococcus sp. OJ82]
gi|392512130|emb|CCI58450.1| putative uncharacterized protein [Staphylococcus equorum subsp.
equorum Mu2]
gi|402763079|gb|EJX17173.1| hypothetical protein SOJ_26220 [Staphylococcus sp. OJ82]
Length = 174
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G L + K L+ AR +L+ + ++ + +VV VFDA P
Sbjct: 6 LIIDGYNMIGQSQDL-SRIAKDNLEEARDQLLTAIANYNAVIADEVVCVFDAYEQSGPPT 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L E + VVTSD +QHA +GAGA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSYIERYVYDLYEKHTRHITVVTSDMSEQHAIFGAGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|417643011|ref|ZP_12293082.1| hypothetical protein SEVCU121_1430 [Staphylococcus warneri VCU121]
gi|330686265|gb|EGG97877.1| hypothetical protein SEVCU121_1430 [Staphylococcus epidermidis
VCU121]
Length = 175
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR++LI+ + ++ + ++V VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SKIAKENLEEAREQLIDAIANYNAVIADEIVCVFDAYEQSGIER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV VF E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTVFTKEKETADSFIERYVYELYDKHTTHITVVTSDMSEQHAIFGSGAYRVSS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|428313556|ref|YP_007124533.1| RNA-binding protein containing a PIN domain [Microcoleus sp. PCC
7113]
gi|428255168|gb|AFZ21127.1| putative RNA-binding protein containing a PIN domain [Microcoleus
sp. PCC 7113]
Length = 183
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G W L+ L+ AR +L+E LV +S + + VVFDA P
Sbjct: 9 ILLVDGYNVIGSWSNLKTTRDHDGLEAARHELVEALVNYSAFQGYETQVVFDAHAQNTPI 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALRE----DGCPKVWVVTSDHLQQHAAYGA 156
+ E ++ V G+T AD +IEK + C ++ V TSD QQ G
Sbjct: 69 YCEVLTTYLSVYYTDFGQT-ADTYIEKYCASFHHYKLCRPCNRLIVATSDRAQQLTVIGY 127
Query: 157 GAFVWSSKALVSEVSLI 173
GA SS+ L S+V I
Sbjct: 128 GAEWMSSQQLASDVEFI 144
>gi|16077165|ref|NP_387978.1| ribonuclease with PIN and NYN domains [Bacillus subtilis subsp.
subtilis str. 168]
gi|221307909|ref|ZP_03589756.1| hypothetical protein Bsubs1_00505 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312230|ref|ZP_03594035.1| hypothetical protein BsubsN3_00500 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317164|ref|ZP_03598458.1| hypothetical protein BsubsJ_00505 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321427|ref|ZP_03602721.1| hypothetical protein BsubsS_00505 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321313768|ref|YP_004206055.1| putative ribonuclease with PIN and NYN domains [Bacillus subtilis
BSn5]
gi|384173758|ref|YP_005555143.1| YacP [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|402774340|ref|YP_006628284.1| ribonuclease with PIN and NYN domains [Bacillus subtilis QB928]
gi|418034775|ref|ZP_12673244.1| putative ribonuclease with PIN and NYN [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|428277512|ref|YP_005559247.1| hypothetical protein BSNT_00196 [Bacillus subtilis subsp. natto
BEST195]
gi|430755601|ref|YP_007211162.1| hypothetical protein A7A1_0109 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449092810|ref|YP_007425301.1| putative ribonuclease with PIN and NYN domains [Bacillus subtilis
XF-1]
gi|452916590|ref|ZP_21965212.1| yacP-like NYN domain protein [Bacillus subtilis MB73/2]
gi|586909|sp|P37574.1|YACP_BACSU RecName: Full=Uncharacterized protein YacP
gi|467484|dbj|BAA05330.1| unknown [Bacillus subtilis]
gi|2632364|emb|CAB11873.1| putative ribonuclease with PIN and NYN domains [Bacillus subtilis
subsp. subtilis str. 168]
gi|291482469|dbj|BAI83544.1| hypothetical protein BSNT_00196 [Bacillus subtilis subsp. natto
BEST195]
gi|320020042|gb|ADV95028.1| putative ribonuclease with PIN and NYN domains [Bacillus subtilis
BSn5]
gi|349592982|gb|AEP89169.1| YacP [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|351468429|gb|EHA28649.1| putative ribonuclease with PIN and NYN [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|402479526|gb|AFQ56035.1| Putative ribonuclease with PIN and NYN domains [Bacillus subtilis
QB928]
gi|407955788|dbj|BAM49028.1| ribonuclease [Bacillus subtilis BEST7613]
gi|407963059|dbj|BAM56298.1| ribonuclease [Bacillus subtilis BEST7003]
gi|430020121|gb|AGA20727.1| Hypothetical protein YacP [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449026725|gb|AGE61964.1| putative ribonuclease with PIN and NYN domains [Bacillus subtilis
XF-1]
gi|452114499|gb|EME04899.1| yacP-like NYN domain protein [Bacillus subtilis MB73/2]
Length = 170
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G WP+L++ + AR LI+++ E+ +V+VVFDA L+ G
Sbjct: 1 MDILLVDGYNMIGAWPQLKD-LKANSFEEARDVLIQKMAEYQSYTGNRVIVVFDAHLVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
L K+ V+++F E AD IEK AL + ++ V TSD+ +Q A +G GA
Sbjct: 60 LE-KKQTNHRVEVIFTKENETADERIEKLAQALN-NIATQIHVATSDYTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEV 170
S++ L+ EV
Sbjct: 118 RKSARELLREV 128
>gi|411120230|ref|ZP_11392606.1| putative RNA-binding protein containing a PIN domain
[Oscillatoriales cyanobacterium JSC-12]
gi|410710386|gb|EKQ67897.1| putative RNA-binding protein containing a PIN domain
[Oscillatoriales cyanobacterium JSC-12]
Length = 183
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 7/137 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYNV G W L+ L+ AR++L+E L+ +S + VVFDA P+
Sbjct: 9 VLLVDGYNVVGCWHDLKKVRDSEGLEEARRRLVESLMNYSAYQGYDTRVVFDAQYRDCPS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALRED---GCPKVWVVTSDHLQQHAAYGAG 157
++E ++ V G+T AD +IEK A R D ++ V TSD QQ G G
Sbjct: 69 NREVITSYLSVCYTDFGQT-ADTYIEKACAAFRNDLRKFHSRLIVATSDRAQQLTVVGYG 127
Query: 158 AFVWSSKALVSEVSLII 174
A S++ L +EV ++
Sbjct: 128 AECISAEQLANEVDSVL 144
>gi|440755079|ref|ZP_20934281.1| hypothetical protein O53_3478 [Microcystis aeruginosa TAIHU98]
gi|440175285|gb|ELP54654.1| hypothetical protein O53_3478 [Microcystis aeruginosa TAIHU98]
Length = 186
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 9 LLLVDGYNVIGSWPSLKKISDRHGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQDTPG 68
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 69 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 128
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 129 HWISAQRLEVEVDL 142
>gi|414078438|ref|YP_006997756.1| hypothetical protein ANA_C13267 [Anabaena sp. 90]
gi|413971854|gb|AFW95943.1| hypothetical protein ANA_C13267 [Anabaena sp. 90]
Length = 182
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 71/141 (50%), Gaps = 9/141 (6%)
Query: 42 VP-VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSG 100
VP VLLVDGYN+ G WP L L+ AR +L+E + +S + VVFDA
Sbjct: 6 VPAVLLVDGYNIIGAWPCLIKTRDYAGLEAARGELVEAMTNYSAFQGYDTQVVFDAQYQN 65
Query: 101 LPTHKE---EFIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAA 153
P+++E +F+ V G+T AD +IEK +LR + ++ V TSD QQ
Sbjct: 66 TPSNRETITDFLTVHYTDFGQT-ADTYIEKTCASLRHQIAQSLLSRMIVATSDRAQQLTV 124
Query: 154 YGAGAFVWSSKALVSEVSLII 174
G GA S+ L EV +
Sbjct: 125 QGYGAEWLSAHQLCGEVETTV 145
>gi|398309199|ref|ZP_10512673.1| ribonuclease with PIN and NYN domains [Bacillus mojavensis RO-H-1]
Length = 170
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G WP+L++ + AR LI+++ E+ +V+VVFDA L+ G
Sbjct: 1 MDILLVDGYNMIGAWPQLKD-LKANSFEEARDVLIQKMAEYQSYTGNRVIVVFDAHLVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
L K+ V+++F E AD IEK AL + ++ V TSD+ +Q A +G GA
Sbjct: 60 LE-KKQTNHRVEVIFTKENETADERIEKLAQALN-NISTQIHVATSDYTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEV 170
S++ L+ EV
Sbjct: 118 RKSARELLREV 128
>gi|297618402|ref|YP_003703561.1| hypothetical protein Slip_2255 [Syntrophothermus lipocalidus DSM
12680]
gi|297146239|gb|ADI02996.1| protein of unknown function DUF901 [Syntrophothermus lipocalidus
DSM 12680]
Length = 171
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL 101
VLLVDGY++ WP+L + L AR+KL+E ++ ++ +VV+VFDA + G
Sbjct: 4 TVLLVDGYSIINSWPEL-SRLKSDNLQRAREKLVELMINYAGFTGRQVVIVFDAHQVKGA 62
Query: 102 PTHKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+E F GV+++F GET AD IE+ + + +V+V TSD +Q +G GA+
Sbjct: 63 VGSRETFNGVEVLFSREGET-ADEVIERLVGDYAAEEEQEVYVATSDWTEQRIVFGKGAY 121
Query: 160 VWSSKALVSEV 170
S++ L EV
Sbjct: 122 RVSARELYHEV 132
>gi|365851760|ref|ZP_09392180.1| hypothetical protein HMPREF9103_00957 [Lactobacillus parafarraginis
F0439]
gi|363716139|gb|EHL99555.1| hypothetical protein HMPREF9103_00957 [Lactobacillus parafarraginis
F0439]
Length = 180
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP L GRL AR +L+ EL E+ R+V ++VVFDA+ +P
Sbjct: 5 LLIVDAYNMIGNWPHLNKLKQAGRLADARDELLAELSEYKKYRDVNMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ + F D+ + AD++IE + ++D +V V TSD +Q + AGA
Sbjct: 63 NSKSFRKFDMEIVWTSKDQTADSYIE-ALSRKKQDRFTQVIVATSDQAEQWTIFSAGALR 121
Query: 161 WSSKALVSEV 170
++ L+ +V
Sbjct: 122 IPARELLGDV 131
>gi|425457195|ref|ZP_18836901.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389801501|emb|CCI19321.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 186
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 9 LLLVDGYNVIGAWPSLKKISDRQGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQDTPG 68
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 69 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 128
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 129 HWISAQRLEVEVDL 142
>gi|418323152|ref|ZP_12934441.1| YacP-like NYN domain protein [Staphylococcus pettenkoferi VCU012]
gi|365230245|gb|EHM71355.1| YacP-like NYN domain protein [Staphylococcus pettenkoferi VCU012]
Length = 175
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ GY +L + K L+ AR++L+ + ++ + ++V VFDA +
Sbjct: 6 LIIDGYNMIGYSKEL-SRLAKENLEEAREQLLIAIANYNAVVADEIVCVFDAYEQAGVEN 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV VF E AD++IE+ + L + + VVTSD +QHA +GAGA+ SS
Sbjct: 65 EHIYHGVKTVFTKEKETADSFIERYVYDLYDKHTRHITVVTSDMSEQHAIFGAGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|406669674|ref|ZP_11076940.1| hypothetical protein HMPREF9707_00843 [Facklamia ignava CCUG 37419]
gi|405582795|gb|EKB56785.1| hypothetical protein HMPREF9707_00843 [Facklamia ignava CCUG 37419]
Length = 192
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 35 NQGIDNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVF 94
N+G+ +L VDGYN+ G WP+L + + L AR L+ EL + R+++V+VVF
Sbjct: 10 NEGVTLKQDILFVDGYNMIGAWPELNHLKQRDELGAARDLLLFELSNYRKYRDIQVIVVF 69
Query: 95 DA-LMSGLPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHA 152
DA + G+ + +E+ +VF E AD++IE+E V + +V V TSD +Q
Sbjct: 70 DAQFVPGITSSYDEY-ECTVVFTAEGETADSYIERE-VPRYINPLTRVVVATSDAAEQWM 127
Query: 153 AYGAGAFVWSSKALVSEV 170
+ G S+K L+ EV
Sbjct: 128 IFQQGVLRQSAKELLMEV 145
>gi|387878964|ref|YP_006309267.1| putative cytosolic protein [Streptococcus parasanguinis FW213]
gi|386792421|gb|AFJ25456.1| putative cytosolic protein [Streptococcus parasanguinis FW213]
Length = 170
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMIAFWQETRQLFQKSELDAARNILLQKLSHYASFEGIEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
EEF V +VF GE AD +IE+ + A +V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVQVVFTGEDETADDYIER-LAAELNTPLHQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSLI 173
S++ L V+++
Sbjct: 123 SARELEKRVAVV 134
>gi|312867962|ref|ZP_07728166.1| conserved hypothetical protein [Streptococcus parasanguinis F0405]
gi|322390888|ref|ZP_08064396.1| protein of hypothetical function DUF901 [Streptococcus
parasanguinis ATCC 903]
gi|311096366|gb|EFQ54606.1| conserved hypothetical protein [Streptococcus parasanguinis F0405]
gi|321142401|gb|EFX37871.1| protein of hypothetical function DUF901 [Streptococcus
parasanguinis ATCC 903]
Length = 170
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMIAFWQETRQLFQKSELDAARNILLQKLSHYASFEGIEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
EEF V +VF GE AD +IE+ + A +V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVQVVFTGEDETADDYIER-LAAELNTPLHQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSLI 173
S++ L V+++
Sbjct: 123 SARELEKRVAVV 134
>gi|296333094|ref|ZP_06875548.1| putative ribonuclease with PIN and NYN domains [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305672796|ref|YP_003864467.1| ribonuclease with PIN and NYN domains [Bacillus subtilis subsp.
spizizenii str. W23]
gi|350264197|ref|YP_004875504.1| hypothetical protein GYO_0125 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|386756678|ref|YP_006229894.1| ribonuclease with PIN and NYN domains [Bacillus sp. JS]
gi|296149710|gb|EFG90605.1| putative ribonuclease with PIN and NYN domains [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305411039|gb|ADM36157.1| putative ribonuclease with PIN and NYN domains [Bacillus subtilis
subsp. spizizenii str. W23]
gi|349597084|gb|AEP84872.1| YacP [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|384929960|gb|AFI26638.1| ribonuclease with PIN and NYN domains [Bacillus sp. JS]
Length = 170
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G WP+L++ + AR LI+++ E+ +V+VVFDA L+ G
Sbjct: 1 MDILLVDGYNMIGAWPQLKD-LKANSFEEARDVLIQKMAEYQSYTGNRVIVVFDAHLVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
L K+ V+++F E AD IEK AL + ++ V TSD+ +Q A +G GA
Sbjct: 60 LE-KKQTNHRVEVIFTKENETADERIEKLAQALN-NIATQIHVATSDYTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEV 170
S++ L+ EV
Sbjct: 118 RKSARELLREV 128
>gi|404416862|ref|ZP_10998675.1| hypothetical protein SARL_03301 [Staphylococcus arlettae CVD059]
gi|403490750|gb|EJY96282.1| hypothetical protein SARL_03301 [Staphylococcus arlettae CVD059]
Length = 175
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L++DGYN+ G L + + L+ AR++L+ + FS + +V+ VFDA SGL +
Sbjct: 6 LIIDGYNMIGQSKTL-SKLAQENLEEAREQLLIAIANFSAVVADEVICVFDAYDQSGLQS 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ E+ GV VF E AD++IEK + L + VVTSD +QHA +G GA+ S
Sbjct: 65 -EYEYHGVKTVFTKEKETADSYIEKYVYDLYNKHTTHITVVTSDMSEQHAIFGTGAYRIS 123
Query: 163 SKAL 166
S+ +
Sbjct: 124 SREM 127
>gi|425448932|ref|ZP_18828776.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389766596|emb|CCI07768.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 203
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 26 LLLVDGYNVIGAWPSLKKISDRHGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQDTPG 85
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 86 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 145
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 146 HWISAQRLEIEVDL 159
>gi|425437271|ref|ZP_18817694.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389677770|emb|CCH93307.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 186
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 9 LLLVDGYNVIGSWPSLKKISDRHGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQDTPG 68
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 69 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 128
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 129 HWISAQRLEIEVDL 142
>gi|311029030|ref|ZP_07707120.1| hypothetical protein Bm3-1_00464 [Bacillus sp. m3-13]
Length = 169
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSG 100
+ +LLVDGYN+ G WP+L +K + L +AR LI + E+ KV++VFDA MS
Sbjct: 1 MDILLVDGYNIIGAWPEL--RVLKDQDLAMARDILISRMAEYQAYTGYKVIIVFDAHMSQ 58
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
K + V++++ E AD IEK ++L D ++ V TSD +Q A +G GA
Sbjct: 59 GIETKYKNHRVEVIYTRENETADERIEKLAISL-SDIRTQIHVATSDFTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L++E I
Sbjct: 118 RKSARELLNESDAI 131
>gi|337283290|ref|YP_004622761.1| hypothetical protein HMPREF0833_11802 [Streptococcus parasanguinis
ATCC 15912]
gi|335370883|gb|AEH56833.1| protein of hypothetical function DUF901 [Streptococcus
parasanguinis ATCC 15912]
Length = 170
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMIAFWQETRQLFQKSELDAARNILLQKLSHYASFEGIEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
EEF V +VF GE AD +IE+ + A +V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVQVVFTGEDETADDYIER-LAAELNTPLHQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSLI 173
S++ L V+++
Sbjct: 123 SARELEKRVAVV 134
>gi|402299376|ref|ZP_10818987.1| putative RNAse [Bacillus alcalophilus ATCC 27647]
gi|401725414|gb|EJS98699.1| putative RNAse [Bacillus alcalophilus ATCC 27647]
Length = 169
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G WPKL K L++AR +LIE + E+ +V V+FDA M
Sbjct: 4 ILLVDGYNMIGAWPKLRTLKDKD-LELARDQLIEIMAEYQAYTGYEVKVIFDAHMVEGVG 62
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVAL-REDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + VD+++ G+ AD IEK + L R D + V TSD +Q +G GA
Sbjct: 63 KKYKNYRVDVIYTGKNETADERIEKLVSELNRLDRT--IHVATSDFTEQSITFGKGALRK 120
Query: 162 SSKALVSEVSLI 173
S++ L++E ++
Sbjct: 121 SARELLTETEIM 132
>gi|384049286|ref|YP_005497303.1| DNA-directed RNA polymerase subunit alpha [Bacillus megaterium
WSH-002]
gi|345446977|gb|AEN91994.1| DNA-directed RNA polymerase, alpha subunit [Bacillus megaterium
WSH-002]
Length = 169
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +LLVDGYN+ G WP L L AR LIE++ E+ +V++VFDA M
Sbjct: 1 MDILLVDGYNMIGAWPDLRK-LRDNDLASARDLLIEKMAEYQAYMGYRVIIVFDAHMVEG 59
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + VD+VF E AD +IEK L + ++ V TSD +Q A +G GA
Sbjct: 60 IEKKAKNHKVDVVFTRENETADEYIEKLAQEL-NNVKTQIHVATSDFTEQWAIFGQGALR 118
Query: 161 WSSKALVSEVSLI 173
S++ L +E+ I
Sbjct: 119 ISARELYNEIEQI 131
>gi|340356798|ref|ZP_08679439.1| tetracycline resistance protein [Sporosarcina newyorkensis 2681]
gi|339620136|gb|EGQ24707.1| tetracycline resistance protein [Sporosarcina newyorkensis 2681]
Length = 170
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
VLLVDGYNV G WP+L+ K AR +LIE + E+ + +V+VVFDA L+ G+
Sbjct: 5 VLLVDGYNVIGAWPELQA-LKKEDFAQARDRLIERMAEYQAHKGWRVIVVFDAHLVPGIE 63
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K+++ VD+VF E AD IEK +V+ + ++ V TSD ++Q + GA
Sbjct: 64 KRKKQY-RVDVVFTRENETADERIEK-LVSELSNRLTQIHVATSDLVEQWVVFAQGALRV 121
Query: 162 SSKALVSEVS 171
S++ L E+
Sbjct: 122 SARELELEMK 131
>gi|323141398|ref|ZP_08076289.1| hypothetical protein HMPREF9443_01061 [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414147|gb|EFY04975.1| hypothetical protein HMPREF9443_01061 [Phascolarctobacterium
succinatutens YIT 12067]
Length = 172
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYNV W + L+ AR+ L+ + E++ + + +VVFDA
Sbjct: 5 LIIDGYNVINAWKDFA-QLRQENLEHARELLVAGVAEYAAFKGYRAIVVFDAQEVAGAAA 63
Query: 105 KEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E+ G+D+VF GET AD+WIE+ LR KV+VVTSD+ +Q GAGA+ S
Sbjct: 64 SEKIHGIDVVFTDEGET-ADSWIERRAYELRRV-QAKVFVVTSDYAEQINILGAGAYRIS 121
Query: 163 SK 164
S+
Sbjct: 122 SR 123
>gi|113474990|ref|YP_721051.1| hypothetical protein Tery_1227 [Trichodesmium erythraeum IMS101]
gi|110166038|gb|ABG50578.1| protein of unknown function DUF901 [Trichodesmium erythraeum
IMS101]
Length = 181
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G W +L L+ AR+ LIE LV +S +++ +VFD+ PT
Sbjct: 9 ILLVDGYNVIGLWSRLREICNFHGLETARRDLIEALVNYSASQDLNTQIVFDSQYQYTPT 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALRED---GCPKVWVVTSDHLQQHAAYGAG 157
KE + + V G+T AD +IEK +LR + ++ V TSD +Q+ G G
Sbjct: 69 TKEIITDKLSVHYTEFGQT-ADTYIEKACASLRTEVHLSRSRLIVATSDRVQRLTVIGYG 127
Query: 158 AFVWSSKALVSEV 170
A SS+ L +V
Sbjct: 128 AEWMSSQQLAHDV 140
>gi|425468284|ref|ZP_18847314.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389885044|emb|CCI34695.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 203
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 26 LLLVDGYNVIGAWPSLKKISDRHGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQDTPG 85
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 86 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 145
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 146 HWISAQRLEIEVDL 159
>gi|443323826|ref|ZP_21052819.1| putative RNA-binding protein containing a PIN domain, partial
[Xenococcus sp. PCC 7305]
gi|442796385|gb|ELS05662.1| putative RNA-binding protein containing a PIN domain, partial
[Xenococcus sp. PCC 7305]
Length = 159
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ G W L+ L+ AR LIE LV F+ + E + +VFDA P++
Sbjct: 10 LLVDGYNIIGSWSDLKKSRDHHGLETARHVLIESLVNFAPMVEYRTQIVFDAHFQNTPSY 69
Query: 105 KEEF---IGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYGAG 157
E++ + V ET AD +IEK + R ++ ++ V T+D Q+ G G
Sbjct: 70 SEKYTPLVSVHFTAFAET-ADTYIEKFCASFRNTEYQEHSSRLIVATNDRAQKLTVTGYG 128
Query: 158 AFVWSSKALVSEVSL 172
A S++ L EV +
Sbjct: 129 AECISAQRLAGEVEI 143
>gi|422850121|ref|ZP_16896797.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK115]
gi|325689009|gb|EGD31017.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK115]
Length = 173
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + ++F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRSYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVTVVFTEEEETADDYIERLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|290968522|ref|ZP_06560061.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
28L]
gi|290781518|gb|EFD94107.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
28L]
Length = 179
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 81/136 (59%), Gaps = 10/136 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS-GLP 102
+L+VDGYN+ WP+L+ F + R + AR++L+E L E++ + V+V +VFDA+ + G
Sbjct: 4 LLIVDGYNIIHAWPELKAVFTRDR-EHARERLVELLAEYAGAKGVEVFIVFDAIYTPGEM 62
Query: 103 THKEEFIGVDIVFP--GETCADAWIEKEIV-ALREDG----CPKVWVVTSDHLQQHAAYG 155
T ++ ++F GET AD++IE+ + L+ D P ++V TSD +Q G
Sbjct: 63 TTRQIGTFCTVIFTSCGET-ADSYIERTVYEKLKTDDNIYPLPSIYVATSDGPEQAQILG 121
Query: 156 AGAFVWSSKALVSEVS 171
AGA+ S++ L +V
Sbjct: 122 AGAYRLSARELREKVQ 137
>gi|428298247|ref|YP_007136553.1| hypothetical protein Cal6303_1536 [Calothrix sp. PCC 6303]
gi|428234791|gb|AFZ00581.1| protein of unknown function DUF901 [Calothrix sp. PCC 6303]
Length = 184
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM 98
+A VLLVDGYN+ G W L+ + L+ AR +LIE L +S +VFDA
Sbjct: 4 SSAPAVLLVDGYNIIGAWSCLKKTRDQSGLEAARYELIESLTSYSAFHGYDTQIVFDAHY 63
Query: 99 SGLPTHKE---EFIGVDIVFPGETCADAWIEKEIVALREDGC----PKVWVVTSDHLQQH 151
+H+E E + V G+T AD +IEK LR+ +V V TSD ++Q
Sbjct: 64 QNTCSHREVITELLSVHYTDFGQT-ADTYIEKSCAGLRQQLAQSLISRVIVATSDRIEQL 122
Query: 152 AAYGAGAFVWSSKALVSEVSLII 174
G GA S+ L EV L +
Sbjct: 123 MVGGYGAEWLSALQLCHEVQLSV 145
>gi|295702332|ref|YP_003595407.1| hypothetical protein BMD_0116 [Bacillus megaterium DSM 319]
gi|294799991|gb|ADF37057.1| protein of unknown function (DUF901) [Bacillus megaterium DSM 319]
Length = 169
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 42 VPVLLVDGYNVCGYWP---KLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM 98
+ +LLVDGYN+ G WP KL ++ + G AR LIE++ E+ +V++VFDA M
Sbjct: 1 MDILLVDGYNMIGAWPDLRKLRDNDLAG----ARDLLIEKMAEYQAYMGYRVIIVFDAHM 56
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
K + VD+VF E AD +IEK L + ++ V TSD +Q A +G G
Sbjct: 57 VEGIEKKAKNHKVDVVFTRENETADEYIEKLAQEL-NNVKTQIHVATSDFTEQWAIFGQG 115
Query: 158 AFVWSSKALVSEVSLI 173
A S++ L +E+ I
Sbjct: 116 ALRISARELYNEIEQI 131
>gi|386586988|ref|YP_006083390.1| hypothetical protein SSUD12_1874 [Streptococcus suis D12]
gi|353739134|gb|AER20142.1| protein of unknown function DUF901 [Streptococcus suis D12]
Length = 173
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
VL+VDGYN+ +W + F KG LD AR L+ L ++ +++V+ VFDA + GL
Sbjct: 5 VLIVDGYNMIAFWQTTKQDFKKGDLDAARTTLLRTLSHYAAFEQIEVICVFDAHHVPGLR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V ++F E AD++IE+ L +V V TSD +Q + GA
Sbjct: 65 QQYDEF-KVSVIFTEEEETADSYIERLSAQLNSARRKQVSVATSDLNEQWVVFSQGALRV 123
Query: 162 SSKALVSEVSLI 173
S++ L +I
Sbjct: 124 SARELEERTRVI 135
>gi|427725156|ref|YP_007072433.1| hypothetical protein Lepto7376_3390 [Leptolyngbya sp. PCC 7376]
gi|427356876|gb|AFY39599.1| protein of unknown function DUF901 [Leptolyngbya sp. PCC 7376]
Length = 180
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS 99
+A ++LVDGYNV G W +L+ + L++AR +LIE L+ ++ K VVFDA
Sbjct: 5 SASALVLVDGYNVIGAWNELKETRDEHGLEMARDELIEVLINYASHNTYKTKVVFDAQYQ 64
Query: 100 GLPTHKEEF---IGVDIVFPGETCADAWIEKEIVALREDGC--PKVWVVTSDHLQQHAAY 154
P+H+E++ + V ET AD +IE+ R ++ VVTSD Q+H
Sbjct: 65 NTPSHEEDYTQLLSVCYTAFSET-ADTYIERTCANFRHTYTIPNRIIVVTSDQAQRHTVV 123
Query: 155 GAGAFVWSSKALVSEV 170
G GA SS L + +
Sbjct: 124 GYGAEWMSSLKLQTAI 139
>gi|425444305|ref|ZP_18824360.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389730337|emb|CCI05371.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 181
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 9 LLLVDGYNVIGAWPSLKKISDRHGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQDTPG 68
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 69 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 128
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 129 HWISAQRLEIEVDL 142
>gi|300868344|ref|ZP_07112970.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300333637|emb|CBN58156.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 182
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP+L + + L++AR+ LIEELV +S + +VFDA P
Sbjct: 9 VLLVDGYNMIGLWPRLSDKRDRDGLEMARRHLIEELVNYSAFLGLDARLVFDAYYQDTPC 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALR---EDGCPKVWVVTSDHLQQHAAYGAG 157
KE + + V G+T AD +IEK LR ++ V TSD QQ G G
Sbjct: 69 VKEIITKNLSVYYTEFGQT-ADTYIEKSCAVLRYELRSLKRRLIVATSDRAQQLTVVGYG 127
Query: 158 AFVWSSKALVSEV 170
A S+ L +V
Sbjct: 128 AEWMSALQLARDV 140
>gi|386582857|ref|YP_006079261.1| hypothetical protein SSU12_1836 [Streptococcus suis SS12]
gi|353735003|gb|AER16013.1| hypothetical protein SSU12_1836 [Streptococcus suis SS12]
Length = 173
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
VL+VDGYN+ +W + F KG LD AR L+ L ++ +++V+ VFDA + GL
Sbjct: 5 VLIVDGYNMIAFWQATKQDFKKGDLDAARTTLLRTLSHYAAFEQIEVICVFDAHHVPGLR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V ++F E AD++IE+ L +V V TSD +Q + GA
Sbjct: 65 QQYDEF-KVSVIFTEEEETADSYIERLSAQLNSARRKQVSVATSDLNEQWVVFSQGALRV 123
Query: 162 SSKALVSEVSLI 173
S++ L +I
Sbjct: 124 SARELEERTKVI 135
>gi|403238388|ref|ZP_10916974.1| DNA-directed RNA polymerase subunit alpha [Bacillus sp. 10403023]
Length = 169
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G WP+L H AR LIE++ E+ KV+VVFDA L+ G
Sbjct: 1 MDILLVDGYNIIGAWPEL-RHLKTNDFSAARDLLIEKMAEYQAYTGYKVIVVFDAHLVPG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + K + V+++F E AD IEK L + ++ V TSD +Q +G GA
Sbjct: 60 IES-KTKNRKVEVIFTRENETADERIEKLAQQLN-NIKTQIHVATSDFTEQWQIFGQGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L++E+ ++
Sbjct: 118 RKSARELLTEMEVV 131
>gi|239636930|ref|ZP_04677928.1| conserved hypothetical protein [Staphylococcus warneri L37603]
gi|239597478|gb|EEQ79977.1| conserved hypothetical protein [Staphylococcus warneri L37603]
Length = 175
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR++LI+ + ++ + ++V VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SKIAKENLEEAREQLIDAIANYNAVIADEIVCVFDAYEQSGIER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTLFTKEKETADSFIERYVYELYDKHTTHITVVTSDMSEQHAIFGSGAYRVSS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|408355468|ref|YP_006843999.1| hypothetical protein AXY_01050 [Amphibacillus xylanus NBRC 15112]
gi|407726239|dbj|BAM46237.1| hypothetical protein AXY_01050 [Amphibacillus xylanus NBRC 15112]
Length = 169
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 11/135 (8%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSG 100
+ VLLVDGYN+ G W +L+ LD ARQ LIE + E+ ++V++VFDA + G
Sbjct: 1 MDVLLVDGYNIIGDWDELK-RLRDIDLDQARQLLIERMAEYQAYLGIRVIIVFDAYEVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIE---KEIVALREDGCPKVWVVTSDHLQQHAAYGA 156
+ +++ V+I++ E AD IE K+I+ ++ KV+V TSD ++Q +
Sbjct: 60 VEAKDKQY-NVEIIYTKEKETADQCIERLVKQIINVQ----TKVYVATSDFVEQRTIFQQ 114
Query: 157 GAFVWSSKALVSEVS 171
GA+ S++ L EV+
Sbjct: 115 GAYRKSARELEIEVN 129
>gi|149183932|ref|ZP_01862317.1| hypothetical protein BSG1_18900 [Bacillus sp. SG-1]
gi|148848355|gb|EDL62620.1| hypothetical protein BSG1_18900 [Bacillus sp. SG-1]
Length = 169
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +LLVDGYN+ G WP+L L AR +L+E + E+ +V+VVFDA
Sbjct: 1 MDILLVDGYNIIGAWPELR-ELKNSDLAAARDRLVECMAEYQGYTGYRVIVVFDAQYVNG 59
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + VD+ + E AD IEK + L + +++V TSD +Q A +G GA
Sbjct: 60 IERKYKNYKVDVFYTRENETADERIEKLAIEL-NNIRTQIYVATSDFTEQWAIFGQGALR 118
Query: 161 WSSKALVSEVSLI 173
S++ L +E+ I
Sbjct: 119 KSARELFNEMQTI 131
>gi|289551667|ref|YP_003472571.1| hypothetical protein SLGD_02356 [Staphylococcus lugdunensis
HKU09-01]
gi|315659127|ref|ZP_07911992.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
gi|385785214|ref|YP_005761387.1| hypothetical protein SLUG_22740 [Staphylococcus lugdunensis
N920143]
gi|418415994|ref|ZP_12989197.1| hypothetical protein HMPREF9308_02362 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418637317|ref|ZP_13199642.1| YacP-like NYN domain protein [Staphylococcus lugdunensis VCU139]
gi|289181198|gb|ADC88443.1| Hypothetical protein DUF901, C-terminal domain of ribosome
protection-type Tc-resistance proteins [Staphylococcus
lugdunensis HKU09-01]
gi|315495851|gb|EFU84181.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
gi|339895470|emb|CCB54798.1| conserved hypothetical protein [Staphylococcus lugdunensis N920143]
gi|374839457|gb|EHS02971.1| YacP-like NYN domain protein [Staphylococcus lugdunensis VCU139]
gi|410873852|gb|EKS21786.1| hypothetical protein HMPREF9308_02362 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 175
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P+L K L+ AR++L++ + +S + +VV VFDA
Sbjct: 6 LVIDGYNMIGQSPELMT-IAKESLEEAREQLLDAIANYSAVIADEVVCVFDAYEQSGIER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV I++ E AD++IE+ + L + VVTSD +QHA +G GA+ SS
Sbjct: 65 EYMYHGVKIIYTKEKETADSYIERYVYDLYNKHTTHITVVTSDMSEQHAIFGTGAYRVSS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|386712448|ref|YP_006178770.1| hypothetical protein HBHAL_1112 [Halobacillus halophilus DSM 2266]
gi|384072003|emb|CCG43493.1| conserved hypothetical protein [Halobacillus halophilus DSM 2266]
Length = 169
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ VL+VDGYN+ G WP+L+ + AR LIE + E+ +++V+FDA
Sbjct: 1 MNVLIVDGYNMIGAWPELK-RLKEQDFGQARDLLIEMMAEYQSYTGDRIIVIFDAYHVRG 59
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K++ V+++F E AD IEK + D +V+V TSD+ +Q +G GAF
Sbjct: 60 VAKKQKNYKVEVIFTKENETADERIEK-LAGELNDVRTQVYVATSDYAEQRTIFGQGAFR 118
Query: 161 WSSKALVSEVSLI 173
S++ L EV I
Sbjct: 119 KSARELYIEVKNI 131
>gi|440682969|ref|YP_007157764.1| protein of unknown function DUF901 [Anabaena cylindrica PCC 7122]
gi|428680088|gb|AFZ58854.1| protein of unknown function DUF901 [Anabaena cylindrica PCC 7122]
Length = 182
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G W L+ L+ AR +LIE + +S + + +VFDA P+
Sbjct: 9 ILLVDGYNIIGAWTCLKKTRDHAGLEAARGELIEAITNYSAFQGYETQIVFDAQYQNTPS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALRED--GC--PKVWVVTSDHLQQHAAYGA 156
++E +F+ V G+T AD +IEK ++R C +V V TSD QQ G
Sbjct: 69 NRENITDFLTVHYTDFGQT-ADTYIEKSCASMRHQIAQCLISRVIVATSDRAQQLMVQGY 127
Query: 157 GAFVWSSKALVSEVSLII 174
GA S+ L EV +
Sbjct: 128 GAEWLSAHQLCGEVETTV 145
>gi|312126946|ref|YP_003991820.1| hypothetical protein Calhy_0714 [Caldicellulosiruptor
hydrothermalis 108]
gi|311776965|gb|ADQ06451.1| protein of unknown function DUF901 [Caldicellulosiruptor
hydrothermalis 108]
Length = 168
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L+VDGYN W L + +D AR+KLI+ L +FS + K+ +VFD+ L+ G
Sbjct: 3 LMVDGYNFINAWELLRK-IAEDDMDSARKKLIDILADFSGYKGYKITIVFDSHLVKGAMR 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
KE F V+++F E AD +IE+ + + K+ VVTSD+L+Q G GA
Sbjct: 62 KKETFSNVEVIFTKEGETADNYIEQYVY--KNSKNEKIGVVTSDYLEQLMILGDGALRIP 119
Query: 163 SKALVSEV 170
+ L+ E+
Sbjct: 120 PRELIYEI 127
>gi|335049761|ref|ZP_08542747.1| hypothetical protein HMPREF1039_0990 [Megasphaera sp. UPII 199-6]
gi|333762256|gb|EGL39760.1| hypothetical protein HMPREF1039_0990 [Megasphaera sp. UPII 199-6]
Length = 179
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 81/136 (59%), Gaps = 10/136 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS-GLP 102
+L+VDGYN+ WP+L+ F + R + AR++L+E L E++ + V+V +VFDA+ + G
Sbjct: 4 LLIVDGYNIIHAWPELKAVFTRDR-EHARERLVELLAEYAGAKGVEVFIVFDAIYTPGEM 62
Query: 103 THKEEFIGVDIVFP--GETCADAWIEKEIV-ALREDG----CPKVWVVTSDHLQQHAAYG 155
T ++ ++F GET AD++IE+ + L+ D P ++V TSD +Q G
Sbjct: 63 TTRQIGTFCTVIFTSCGET-ADSYIERTVYEKLKTDDNIYPLPSIYVATSDGPEQAQILG 121
Query: 156 AGAFVWSSKALVSEVS 171
AGA+ S++ L +V
Sbjct: 122 AGAYRLSARELREKVQ 137
>gi|262052420|ref|ZP_06024620.1| hypothetical protein SA930_0256 [Staphylococcus aureus 930918-3]
gi|259159666|gb|EEW44710.1| hypothetical protein SA930_0256 [Staphylococcus aureus 930918-3]
Length = 174
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SAIAKENLEEARMQLIDAIANYNAVISDEIICVFDAYDQSCVER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|229917376|ref|YP_002886022.1| hypothetical protein EAT1b_1651 [Exiguobacterium sp. AT1b]
gi|229468805|gb|ACQ70577.1| protein of unknown function DUF901 [Exiguobacterium sp. AT1b]
Length = 179
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G WP L + + AR LIE + E+ + +V +VFDA M
Sbjct: 8 LLLVDGYNIIGAWPHLRS-LRDVDFEQARNLLIEAMAEYQAVSGKEVTIVFDAHMRYGRE 66
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
KE+ VD+V+ E AD WIE+ L +D ++V T+D +Q +G GA
Sbjct: 67 SKEKRSRVDVVYTKENETADEWIERRAHELVDDRLITLFVATNDFTEQWVIFGQGAL 123
>gi|443635007|ref|ZP_21119178.1| putative ribonuclease with PIN and NYN domain protein [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
gi|443345198|gb|ELS59264.1| putative ribonuclease with PIN and NYN domain protein [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
Length = 170
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G WP+L++ + AR LI+++ E+ +V+VVFDA L+ G
Sbjct: 1 MDILLVDGYNMIGAWPQLKD-LKANSFEEARDVLIQKMAEYQSYTGNRVIVVFDAHLVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
L K V+++F E AD IEK AL + ++ V TSD+ +Q A +G GA
Sbjct: 60 LEK-KHTNHRVEVIFTKENETADERIEKLAQALN-NVATQIHVATSDYTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEV 170
S++ L+ EV
Sbjct: 118 RKSARELLREV 128
>gi|312135728|ref|YP_004003066.1| hypothetical protein Calow_1728 [Caldicellulosiruptor owensensis
OL]
gi|311775779|gb|ADQ05266.1| protein of unknown function DUF901 [Caldicellulosiruptor owensensis
OL]
Length = 168
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L+VDGYN W L+ + LD AR+KLI+ L +FS R K+ VVFD+ L+ G
Sbjct: 3 LMVDGYNFINAWDILKK-IAEEDLDSARKKLIDILADFSGYRGYKITVVFDSHLVKGAMR 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
KE V++VF E AD++IE+ + + K+ VVTSD+L+Q G GA
Sbjct: 62 RKEIISNVEVVFTKEGETADSYIEQYV--YKNSKNEKIGVVTSDYLEQLIILGDGALRIP 119
Query: 163 SKALVSEV 170
+ L+ E+
Sbjct: 120 PRELIYEI 127
>gi|425459959|ref|ZP_18839445.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389827476|emb|CCI21224.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 186
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 9 LLLVDGYNVIGSWPSLKKISDRHGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQDTPG 68
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 69 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 128
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 129 QWISAQRLEIEVDL 142
>gi|392393360|ref|YP_006429962.1| small GTP-binding protein domain-containing protein
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390524438|gb|AFM00169.1| small GTP-binding protein domain protein [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 882
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ WP+L+ +K +D AR +L++ L + IR+ +++VVFDA + G P
Sbjct: 715 LLVDGYNIIFAWPELKE-LVKDNMDGARMRLLDTLSNYQGIRKCRIMVVFDAYRVQGHPE 773
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + IV+ E AD +IE+ A + V TSD LQQ GAG + S
Sbjct: 774 EVVDYDTIRIVYTKEAQTADQYIER--FAYDHQKKFNIAVATSDGLQQIIIRGAGCALLS 831
Query: 163 SKALVSEVSL 172
+K L E+ +
Sbjct: 832 AKDLKEEIEM 841
>gi|17232037|ref|NP_488585.1| hypothetical protein all4545 [Nostoc sp. PCC 7120]
gi|17133681|dbj|BAB76244.1| all4545 [Nostoc sp. PCC 7120]
Length = 182
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP L+ K L+ AR +L+E + +S + +VFDA +
Sbjct: 9 VLLVDGYNIIGAWPCLKKTRDKNGLEAARGQLVEAMTSYSSFQGYDTQIVFDAHYQNTCS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYGA 156
+KE E + V G+T AD +IEK +LR + +V V TSD QQ G
Sbjct: 69 NKEIITELVSVYYTDFGQT-ADTYIEKICASLRPEVSQARISRVIVATSDRAQQLTVQGY 127
Query: 157 GAFVWSSKALVSEVSLII 174
GA S+ L EV +
Sbjct: 128 GAEWLSAYQLCGEVETTV 145
>gi|425438688|ref|ZP_18819030.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389718837|emb|CCH97260.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 203
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 26 LLLVDGYNVIGAWPSLKKISDRHGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQDTPG 85
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 86 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 145
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 146 QWISAQRLEIEVDL 159
>gi|325845851|ref|ZP_08169049.1| hypothetical protein HMPREF9246_1541 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325481757|gb|EGC84789.1| hypothetical protein HMPREF9246_1541 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 174
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS-GLP 102
+ VDGYN+ WP L NH + L++AR+KLI+E+ E++ + KVVVVFDA S G
Sbjct: 8 ITYVDGYNIINSWPDL-NHIKENSLELAREKLIDEMAEYASLSNEKVVVVFDAYNSDGEK 66
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEK--EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
+ E +GV+IV+ + AD +IEK A R + V VVT D Q A+ GA
Sbjct: 67 ENIFEKLGVEIVYTKKFQTADTYIEKMTNQYARRHN----VKVVTDDGQVQSLAFERGA 121
>gi|319946270|ref|ZP_08020510.1| hypothetical protein containing DUF901 [Streptococcus australis
ATCC 700641]
gi|417920390|ref|ZP_12563898.1| hypothetical protein HMPREF9961_0264 [Streptococcus australis ATCC
700641]
gi|319747652|gb|EFV99905.1| hypothetical protein containing DUF901 [Streptococcus australis
ATCC 700641]
gi|342829536|gb|EGU63888.1| hypothetical protein HMPREF9961_0264 [Streptococcus australis ATCC
700641]
Length = 171
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K LD AR L+E+L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKKSELDAARTILLEKLSHYASFEGIRVICVFDAQYMPGIR 64
Query: 103 THKEEFIGVDIVFPG-ETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
EEF V +VF E AD +IE+ + A +V V TSD +Q + GA
Sbjct: 65 QTYEEF-QVQVVFTAEEETADDYIER-LAAELNTPLHQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSLI 173
S++ L V+++
Sbjct: 123 SARELEKRVAVV 134
>gi|428770161|ref|YP_007161951.1| hypothetical protein Cyan10605_1805 [Cyanobacterium aponinum PCC
10605]
gi|428684440|gb|AFZ53907.1| protein of unknown function DUF901 [Cyanobacterium aponinum PCC
10605]
Length = 182
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+LLVDGYNV G W L++ + L+ AR LIE L+ +S +E++ +VFDA
Sbjct: 8 AILLVDGYNVIGSWAYLQSIRDQKGLEYARNSLIESLINYSGYKELETKIVFDAHYQKTV 67
Query: 103 THKEEF---IGVDIVFPGETCADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGA 156
++E++ + V ET AD +IEK V + ++ V TSD Q+H G
Sbjct: 68 KNEEKYSKSLSVHYTSYSET-ADTYIEKFCASFVRQNPESRTRIIVATSDQAQRHTVVGY 126
Query: 157 GAFVWSSKALVSEV 170
GA S++ L EV
Sbjct: 127 GAEWMSAQKLAKEV 140
>gi|89100739|ref|ZP_01173594.1| YacP [Bacillus sp. NRRL B-14911]
gi|89084556|gb|EAR63702.1| YacP [Bacillus sp. NRRL B-14911]
Length = 169
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +L+VDGYN+ G WP L L AR KL+E++ EF +V++VFDA
Sbjct: 1 MDILIVDGYNIIGAWPDL-RELKNKDLGAARDKLVEKMAEFQGYSGYRVIIVFDAHYVKG 59
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V++VF E AD IEK ++L + ++ V TSD+ +Q A +G GA
Sbjct: 60 TEKKFKNYKVEVVFTKENESADERIEKLAISLN-NIKTQIHVATSDYTEQWAIFGQGALR 118
Query: 161 WSSKALVSEV 170
S++ L+ E+
Sbjct: 119 ISARELLIEM 128
>gi|425466847|ref|ZP_18846141.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389830524|emb|CCI27431.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 203
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 26 LLLVDGYNVIGAWPSLKKISDRQGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQHTPG 85
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 86 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 145
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 146 QWISAQRLEIEVDL 159
>gi|407797872|ref|ZP_11144787.1| hypothetical protein MJ3_13164 [Salimicrobium sp. MJ3]
gi|407017635|gb|EKE30392.1| hypothetical protein MJ3_13164 [Salimicrobium sp. MJ3]
Length = 169
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 42 VPVLLVDGYNVCGYWPKLE---NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM 98
+ +LLVDGYN+ G WP+L+ +H + G AR LI L E+ R +V+VVFDA
Sbjct: 1 MNILLVDGYNMIGAWPELKELRDHDLSG----ARDLLIGMLAEYQSYRGERVIVVFDAYH 56
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
K++ +++++ E AD IEK + D KV+V TSD+ QQ + G
Sbjct: 57 VRGMERKQQSAKIEVIYTKENETADERIEK-LSGELNDVRTKVYVATSDYAQQRVIFAQG 115
Query: 158 AFVWSSKAL 166
A+ S++ L
Sbjct: 116 AYRISAREL 124
>gi|443650349|ref|ZP_21130469.1| hypothetical protein C789_1009 [Microcystis aeruginosa DIANCHI905]
gi|159026668|emb|CAO89018.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443334698|gb|ELS49195.1| hypothetical protein C789_1009 [Microcystis aeruginosa DIANCHI905]
Length = 186
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 9 LLLVDGYNVIGAWPSLKKISDRHGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQDTPG 68
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 69 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 128
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 129 QWISAQRLEIEVDL 142
>gi|75908729|ref|YP_323025.1| hypothetical protein Ava_2515 [Anabaena variabilis ATCC 29413]
gi|75702454|gb|ABA22130.1| Protein of unknown function DUF901 [Anabaena variabilis ATCC 29413]
Length = 182
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP L+ K L+ AR +L+E + +S + +VFDA +
Sbjct: 9 VLLVDGYNIIGAWPCLKKTRDKNGLEAARGQLVEAMTSYSSYQGYDTQIVFDAHYQNTCS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYGA 156
+KE E + V G+T AD +IEK +LR + +V V TSD QQ G
Sbjct: 69 NKEIITELVSVYYTDFGQT-ADTYIEKICASLRPEVSQARISRVIVATSDRAQQLTVQGY 127
Query: 157 GAFVWSSKALVSEVSLII 174
GA S+ L EV +
Sbjct: 128 GAEWLSAYQLCGEVETTV 145
>gi|166364655|ref|YP_001656928.1| hypothetical protein MAE_19140 [Microcystis aeruginosa NIES-843]
gi|166087028|dbj|BAG01736.1| hypothetical protein MAE_19140 [Microcystis aeruginosa NIES-843]
Length = 186
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ + P
Sbjct: 9 LLLVDGYNVIGAWPSLKKISDRHGLEPARDKLIETLIGYTHHQGYQTQIVFDSYLQDTPG 68
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK D P ++ V TSD+ Q+ G GA
Sbjct: 69 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWHDRAPAIGRIIVATSDNAQKMTVMGYGA 128
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 129 QWISAQRLEIEVDL 142
>gi|419799886|ref|ZP_14325202.1| YacP-like NYN domain protein [Streptococcus parasanguinis F0449]
gi|385696727|gb|EIG27197.1| YacP-like NYN domain protein [Streptococcus parasanguinis F0449]
Length = 170
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMIAFWQETRQLFQKSELDAARNILLQKLSHYASFEGIEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
E+F V +VF GE AD +IE+ + A +V V TSD +Q + GA
Sbjct: 65 QTYEDF-NVQVVFTGEDETADDYIER-LAAELNTPLHQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSLI 173
S++ L V+++
Sbjct: 123 SARELEKRVAVV 134
>gi|421489763|ref|ZP_15937139.1| YacP-like NYN domain protein [Streptococcus anginosus SK1138]
gi|400374351|gb|EJP27270.1| YacP-like NYN domain protein [Streptococcus anginosus SK1138]
Length = 174
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + + F KG LD AR L+ L ++ +++++ VFDA M G+
Sbjct: 5 ILLVDGYNMVAFWQETRSLFNKGELDAARTILLNRLSNYASFEQLEIICVFDAQYMPGIR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V +VF E AD +IE+ + A + +V V TSD +Q + GA
Sbjct: 65 QTYDEF-NVTVVFTEEEETADDYIER-LAAELNNPINQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSL 172
S++ L V++
Sbjct: 123 SARELEKRVAV 133
>gi|422880786|ref|ZP_16927242.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK355]
gi|332365774|gb|EGJ43531.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK355]
Length = 173
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVKVVFTEEEETADDYIERLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAI 133
>gi|160879963|ref|YP_001558931.1| small GTP-binding protein [Clostridium phytofermentans ISDg]
gi|160428629|gb|ABX42192.1| small GTP-binding protein [Clostridium phytofermentans ISDg]
Length = 885
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 6 TSYRRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLENHFIK 65
++++R K +E E T +Y+ N+ +N LLVDGYN+ WP+L H +
Sbjct: 685 STWKRSKSARESYYEPT------TYV---NRQKENKEEYLLVDGYNIIHAWPELNEH-VD 734
Query: 66 GRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPTHKEEFIGVDIVFPGET-CADA 123
+ AR KL++ L + IR+ +++VVFDA + G P ++ + +V+ E AD
Sbjct: 735 ENMHGARMKLLDILCNYQGIRKCQIIVVFDAYRLLGHPEEVIDYHNIHVVYTKEAQTADQ 794
Query: 124 WIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAFVWSSKALVSEVSLI 173
+IEK D K + V TSD LQQ GAG + S++ L E+ +
Sbjct: 795 YIEK----FAHDNQKKYDITVATSDGLQQIIIRGAGCSLLSARDLKEEIDRV 842
>gi|422863419|ref|ZP_16910050.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK408]
gi|327472393|gb|EGF17824.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK408]
Length = 173
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ + L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVTVVFTEEEETADDYIERLVAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKAL 166
S++ L
Sbjct: 121 RVSAREL 127
>gi|414156839|ref|ZP_11413140.1| hypothetical protein HMPREF9186_01560 [Streptococcus sp. F0442]
gi|410869832|gb|EKS17792.1| hypothetical protein HMPREF9186_01560 [Streptococcus sp. F0442]
Length = 171
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMIAFWQETRQLFQKSELDAARNILLQKLSHYASFEGIEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V +VF GE AD +IE+ + A +V V TSD +Q + GA
Sbjct: 65 QTYDEF-NVQVVFTGEDETADDYIER-LAAELNTPLHQVSVATSDLHEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSLI 173
S++ L V+++
Sbjct: 123 SARELEKRVAVV 134
>gi|319649134|ref|ZP_08003342.1| YacP protein [Bacillus sp. BT1B_CT2]
gi|404487461|ref|YP_006711567.1| hypothetical protein BLi00115 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423680490|ref|ZP_17655329.1| YacP [Bacillus licheniformis WX-02]
gi|52346455|gb|AAU39089.1| DUF901 family protein YacP [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317388834|gb|EFV69653.1| YacP protein [Bacillus sp. BT1B_CT2]
gi|383441596|gb|EID49305.1| YacP [Bacillus licheniformis WX-02]
Length = 170
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G WP+L++ + + AR LI+++ E+ +V+VVFDA L+ G
Sbjct: 1 MDILLVDGYNMIGAWPQLKD-LKENSFEEARDLLIQKMAEYQSYTGFRVIVVFDAHLVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ K V+++F E AD IEK +V+ ++ V TSD+ +Q A +G GA
Sbjct: 60 IEKKKVNH-RVEVIFTRENETADERIEK-LVSDLNSIQTQIHVATSDYTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L+ EV I
Sbjct: 118 RKSARELLREVEAI 131
>gi|418962964|ref|ZP_13514812.1| YacP-like NYN domain protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383344733|gb|EID22888.1| YacP-like NYN domain protein [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 174
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + + F KG LDVAR L+ +L ++ +++++ VFDA M G+
Sbjct: 5 ILLVDGYNMVAFWQETRSLFNKGELDVARTILLNKLSNYASFEQLEIICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V +VF E AD +IE+ L + +V V TSD +Q + GA
Sbjct: 65 QTYDEF-NVTVVFTEEEETADDYIERLATDL-NNPRNQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSL 172
S++ L V++
Sbjct: 123 SARELEKRVAV 133
>gi|296131815|ref|YP_003639062.1| hypothetical protein TherJR_0274 [Thermincola potens JR]
gi|296030393|gb|ADG81161.1| protein of unknown function DUF901 [Thermincola potens JR]
Length = 170
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L++DGYN+ WP+L + + AR KLI+ L E+ ++R +++VVFDA L+ G
Sbjct: 4 ILIIDGYNIIHAWPELAG-LMDKEPEHARDKLIDILAEYRVLRNCRIIVVFDAHLVKGGL 62
Query: 103 THKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+E GV++++ GET AD+ IE+ + ++G +V V TSD QQ +G GA
Sbjct: 63 GGRETRNGVEVIYSQEGET-ADSVIERLVSMYIKEG--RVAVATSDWSQQSFIFGKGAAR 119
Query: 161 WSSKALVSEVS 171
++ LV EV+
Sbjct: 120 MPARELVEEVT 130
>gi|253577161|ref|ZP_04854481.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843405|gb|EES71433.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 173
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
VLLVDGYN+ G WP+L K L AR +L+E L ++ KV+VVFDA + GL
Sbjct: 7 VLLVDGYNMIGGWPEL-AELSKQDLQAARDRLLERLADYQAFSGRKVIVVFDAYRVPGLG 65
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ V++VF E AD IE+ +V +++V TSD ++QH +G GA
Sbjct: 66 KSYTQN-KVELVFTKEKETADECIER-LVGELSHRRRQIYVATSDMVEQHVIFGQGALRI 123
Query: 162 SSKALVSEV 170
S++ L+ +V
Sbjct: 124 SARELLIQV 132
>gi|312792761|ref|YP_004025684.1| hypothetical protein Calkr_0523 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179901|gb|ADQ40071.1| protein of unknown function DUF901 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 168
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L+VDGYN W L + LD AR+KLI+ L +FS + K+ +VFD+ L+ G
Sbjct: 3 LMVDGYNFINAWENLRK-IAEDDLDSARKKLIDILADFSGYKGYKITIVFDSHLVKGAMR 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
KE V+++F E AD +IE+ + + K+ VVTSD+L+Q G GA
Sbjct: 62 KKETISNVEVIFTKEGETADNYIEQYV--YKNSKNEKIGVVTSDYLEQLMILGDGALRIP 119
Query: 163 SKALVSEV 170
+ L+ E+
Sbjct: 120 PRELIYEI 127
>gi|49482762|ref|YP_039986.1| hypothetical protein SAR0536 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257424646|ref|ZP_05601073.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427314|ref|ZP_05603713.1| YacP [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429950|ref|ZP_05606334.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432652|ref|ZP_05609012.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435556|ref|ZP_05611604.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282903120|ref|ZP_06311011.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
C160]
gi|282904910|ref|ZP_06312768.1| hypothetical protein SDAG_01897 [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282907860|ref|ZP_06315695.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910173|ref|ZP_06317977.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913365|ref|ZP_06321154.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M899]
gi|282918320|ref|ZP_06326057.1| hypothetical protein SASG_01875 [Staphylococcus aureus subsp.
aureus C427]
gi|282923282|ref|ZP_06330962.1| hypothetical protein SARG_00602 [Staphylococcus aureus subsp.
aureus C101]
gi|283957330|ref|ZP_06374783.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293500411|ref|ZP_06666262.1| hypothetical protein SCAG_00941 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293509356|ref|ZP_06668067.1| hypothetical protein SAZG_00504 [Staphylococcus aureus subsp.
aureus M809]
gi|293523943|ref|ZP_06670630.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M1015]
gi|295427070|ref|ZP_06819706.1| hypothetical protein SIAG_02436 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590577|ref|ZP_06949216.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|384868543|ref|YP_005748739.1| hypothetical protein HMPREF0772_12657 [Staphylococcus aureus subsp.
aureus TCH60]
gi|415684088|ref|ZP_11449243.1| hypothetical protein CGSSa00_12722 [Staphylococcus aureus subsp.
aureus CGS00]
gi|417889307|ref|ZP_12533398.1| hypothetical protein SA21195_1696 [Staphylococcus aureus subsp.
aureus 21195]
gi|418566009|ref|ZP_13130398.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21264]
gi|418581208|ref|ZP_13145291.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418595408|ref|ZP_13159022.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21342]
gi|418601628|ref|ZP_13165048.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21345]
gi|418891136|ref|ZP_13445253.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418896918|ref|ZP_13450991.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418899882|ref|ZP_13453941.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418908287|ref|ZP_13462295.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG149]
gi|418916342|ref|ZP_13470305.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418922165|ref|ZP_13476082.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418981400|ref|ZP_13529115.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418985033|ref|ZP_13532723.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|49240891|emb|CAG39558.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272216|gb|EEV04339.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275507|gb|EEV06980.1| YacP [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279147|gb|EEV09748.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282067|gb|EEV12202.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257284747|gb|EEV14866.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282314150|gb|EFB44540.1| hypothetical protein SARG_00602 [Staphylococcus aureus subsp.
aureus C101]
gi|282317454|gb|EFB47826.1| hypothetical protein SASG_01875 [Staphylococcus aureus subsp.
aureus C427]
gi|282322397|gb|EFB52719.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M899]
gi|282325565|gb|EFB55873.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328244|gb|EFB58522.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331735|gb|EFB61246.1| hypothetical protein SDAG_01897 [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282596075|gb|EFC01036.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
C160]
gi|283790781|gb|EFC29596.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920906|gb|EFD97967.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M1015]
gi|291095416|gb|EFE25677.1| hypothetical protein SCAG_00941 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467453|gb|EFF09968.1| hypothetical protein SAZG_00504 [Staphylococcus aureus subsp.
aureus M809]
gi|295128858|gb|EFG58488.1| hypothetical protein SIAG_02436 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297576876|gb|EFH95591.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|312439048|gb|ADQ78119.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH60]
gi|315193896|gb|EFU24290.1| hypothetical protein CGSSa00_12722 [Staphylococcus aureus subsp.
aureus CGS00]
gi|341851717|gb|EGS92628.1| hypothetical protein SA21195_1696 [Staphylococcus aureus subsp.
aureus 21195]
gi|371971883|gb|EHO89275.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21264]
gi|374398047|gb|EHQ69245.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21345]
gi|374401547|gb|EHQ72613.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21342]
gi|377704964|gb|EHT29272.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377707220|gb|EHT31513.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377708165|gb|EHT32456.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377711992|gb|EHT36215.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377732093|gb|EHT56144.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377735488|gb|EHT59518.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377751694|gb|EHT75622.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377755626|gb|EHT79524.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG149]
gi|377761697|gb|EHT85566.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 174
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SAIAKENLEEARMQLIDTIANYNAVISDEIICVFDAYDQSGVER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|422872285|ref|ZP_16918778.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK1087]
gi|328944842|gb|EGG39002.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK1087]
Length = 173
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++VV VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVVCVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVTVVFTEEEETADDYIERLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|302872438|ref|YP_003841074.1| hypothetical protein COB47_1812 [Caldicellulosiruptor obsidiansis
OB47]
gi|302575297|gb|ADL43088.1| protein of unknown function DUF901 [Caldicellulosiruptor
obsidiansis OB47]
Length = 168
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L+VDGYN W L + LD AR+KLI+ L +FS + K+ +VFD+ L+ G
Sbjct: 3 LMVDGYNFINAWENLRK-IAEEDLDSARKKLIDILADFSGYKGYKITIVFDSHLVKGSMR 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
KE V+++F E AD +IE+ + + K+ VVTSD+L+Q G GA
Sbjct: 62 RKETISNVEVIFTKEGETADNYIEQYV--YKNSKNEKIGVVTSDYLEQLIILGDGALRIP 119
Query: 163 SKALVSEV 170
+ L+ E+
Sbjct: 120 PRELIHEI 127
>gi|212695901|ref|ZP_03304029.1| hypothetical protein ANHYDRO_00434 [Anaerococcus hydrogenalis DSM
7454]
gi|212677024|gb|EEB36631.1| hypothetical protein ANHYDRO_00434 [Anaerococcus hydrogenalis DSM
7454]
Length = 176
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 9/119 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS-GLP 102
+ VDGYN+ WP L NH + L++AR+KLI+E+ E++ + KVVVVFDA S G
Sbjct: 8 ITYVDGYNIINSWPDL-NHIKENSLELAREKLIDEMAEYASLSNEKVVVVFDAYNSDGEK 66
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEK--EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
+ E +GV+IV+ + AD +IEK A R + V VVT D Q A+ GA
Sbjct: 67 ENIFEKLGVEIVYTKKFQTADTYIEKMTNQYARRHN----VKVVTDDGQVQSLAFERGA 121
>gi|430748588|ref|YP_007211496.1| RNA-binding protein containing a PIN domain [Thermobacillus
composti KWC4]
gi|430732553|gb|AGA56498.1| putative RNA-binding protein containing a PIN domain
[Thermobacillus composti KWC4]
Length = 183
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL 101
VLLVDGYN+ G WP+LE +K R + AR +L++ L E+ +V V+FDA + GL
Sbjct: 8 VLLVDGYNMIGAWPELER--LKERDFEEARDRLLDLLAEYQGYSGTRVYVIFDAHQVPGL 65
Query: 102 P-THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
T+K++ + V ET AD IE+ + L G ++V TSD ++QH A+G GA
Sbjct: 66 GRTYKQQKLTVIYTKENET-ADECIERLVGELSGRG-RHIYVATSDLVEQHVAFGKGALR 123
Query: 161 WSSKALVSEV 170
S++ L+ E+
Sbjct: 124 ISARELLIEI 133
>gi|21282217|ref|NP_645305.1| hypothetical protein MW0488 [Staphylococcus aureus subsp. aureus
MW2]
gi|49485397|ref|YP_042618.1| hypothetical protein SAS0490 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651409|ref|YP_185465.1| hypothetical protein SACOL0579 [Staphylococcus aureus subsp. aureus
COL]
gi|82750240|ref|YP_415981.1| hypothetical protein SAB0483 [Staphylococcus aureus RF122]
gi|87160481|ref|YP_493221.1| hypothetical protein SAUSA300_0518 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194295|ref|YP_499087.1| hypothetical protein SAOUHSC_00514 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151220707|ref|YP_001331529.1| hypothetical protein NWMN_0495 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161508772|ref|YP_001574431.1| hypothetical protein USA300HOU_0526 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141031|ref|ZP_03565524.1| hypothetical protein SauraJ_05253 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253732540|ref|ZP_04866705.1| protein of hypothetical function DUF901 [Staphylococcus aureus
subsp. aureus TCH130]
gi|258452735|ref|ZP_05700733.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|262049575|ref|ZP_06022444.1| hypothetical protein SAD30_0369 [Staphylococcus aureus D30]
gi|282915855|ref|ZP_06323620.1| hypothetical protein SATG_01952 [Staphylococcus aureus subsp.
aureus D139]
gi|282924446|ref|ZP_06332118.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|283769688|ref|ZP_06342580.1| YacP [Staphylococcus aureus subsp. aureus H19]
gi|284023542|ref|ZP_06377940.1| hypothetical protein Saura13_03092 [Staphylococcus aureus subsp.
aureus 132]
gi|294850308|ref|ZP_06791042.1| hypothetical protein SKAG_02400 [Staphylococcus aureus A9754]
gi|297208754|ref|ZP_06925182.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|300912844|ref|ZP_07130286.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|379013814|ref|YP_005290050.1| hypothetical protein SAVC_02250 [Staphylococcus aureus subsp.
aureus VC40]
gi|379020303|ref|YP_005296965.1| hypothetical protein M013TW_0517 [Staphylococcus aureus subsp.
aureus M013]
gi|384546813|ref|YP_005736066.1| hypothetical protein SAOV_0568 [Staphylococcus aureus subsp. aureus
ED133]
gi|384861195|ref|YP_005743915.1| hypothetical protein SAA6008_00539 [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384869118|ref|YP_005751832.1| hypothetical protein SAT0131_00585 [Staphylococcus aureus subsp.
aureus T0131]
gi|385780798|ref|YP_005756969.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|386728290|ref|YP_006194673.1| hypothetical protein ST398NM01_0608 [Staphylococcus aureus subsp.
aureus 71193]
gi|387142222|ref|YP_005730615.1| hypothetical protein SATW20_06020 [Staphylococcus aureus subsp.
aureus TW20]
gi|387601887|ref|YP_005733408.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ST398]
gi|404477919|ref|YP_006709349.1| hypothetical protein C248_0606 [Staphylococcus aureus 08BA02176]
gi|415688902|ref|ZP_11452417.1| hypothetical protein CGSSa01_14585 [Staphylococcus aureus subsp.
aureus CGS01]
gi|416840767|ref|ZP_11903954.1| hypothetical protein SAO11_1361 [Staphylococcus aureus O11]
gi|416846017|ref|ZP_11906360.1| hypothetical protein SAO46_1002 [Staphylococcus aureus O46]
gi|417648372|ref|ZP_12298198.1| hypothetical protein SA21189_0786 [Staphylococcus aureus subsp.
aureus 21189]
gi|417654162|ref|ZP_12303889.1| hypothetical protein SA21193_1248 [Staphylococcus aureus subsp.
aureus 21193]
gi|417796778|ref|ZP_12443982.1| hypothetical protein SA21305_0605 [Staphylococcus aureus subsp.
aureus 21305]
gi|417895982|ref|ZP_12539958.1| hypothetical protein SA21235_0905 [Staphylococcus aureus subsp.
aureus 21235]
gi|417899772|ref|ZP_12543673.1| hypothetical protein SA21259_0582 [Staphylococcus aureus subsp.
aureus 21259]
gi|417902210|ref|ZP_12546079.1| hypothetical protein SA21266_0349 [Staphylococcus aureus subsp.
aureus 21266]
gi|417902882|ref|ZP_12546743.1| hypothetical protein SA21269_1001 [Staphylococcus aureus subsp.
aureus 21269]
gi|418279330|ref|ZP_12892693.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21178]
gi|418286188|ref|ZP_12898839.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21209]
gi|418310641|ref|ZP_12922177.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21331]
gi|418312794|ref|ZP_12924302.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21334]
gi|418315292|ref|ZP_12926756.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21340]
gi|418318092|ref|ZP_12929506.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21232]
gi|418320313|ref|ZP_12931674.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
VCU006]
gi|418561535|ref|ZP_13126023.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21262]
gi|418569671|ref|ZP_13133990.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21283]
gi|418573390|ref|ZP_13137584.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21333]
gi|418578423|ref|ZP_13142518.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418642031|ref|ZP_13204232.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-24]
gi|418643829|ref|ZP_13205984.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-55]
gi|418646225|ref|ZP_13208336.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-88]
gi|418651278|ref|ZP_13213286.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-91]
gi|418658737|ref|ZP_13220446.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-111]
gi|418871558|ref|ZP_13425934.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-125]
gi|418874550|ref|ZP_13428816.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418902796|ref|ZP_13456837.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418905099|ref|ZP_13459128.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418911201|ref|ZP_13465184.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|418924760|ref|ZP_13478663.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418927848|ref|ZP_13481734.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418933463|ref|ZP_13487287.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418949155|ref|ZP_13501414.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-157]
gi|418950128|ref|ZP_13502330.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-160]
gi|418954709|ref|ZP_13506665.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-189]
gi|418980357|ref|ZP_13528140.1| Putative cytosolic protein [Staphylococcus aureus subsp. aureus
DR10]
gi|418987433|ref|ZP_13535106.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|419774867|ref|ZP_14300821.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CO-23]
gi|421149297|ref|ZP_15608955.1| hypothetical protein Newbould305_1058 [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422744669|ref|ZP_16798624.1| hypothetical protein HMPREF9529_02524 [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745096|ref|ZP_16799042.1| hypothetical protein HMPREF9528_00131 [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424784386|ref|ZP_18211196.1| Hypothetical protein CN79_0513 [Staphylococcus aureus CN79]
gi|440707558|ref|ZP_20888253.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21282]
gi|440734007|ref|ZP_20913620.1| hypothetical protein SASA_00160 [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443638283|ref|ZP_21122330.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21196]
gi|448741475|ref|ZP_21723439.1| hypothetical protein C429_1481 [Staphylococcus aureus KT/314250]
gi|448743997|ref|ZP_21725902.1| hypothetical protein C428_1227 [Staphylococcus aureus KT/Y21]
gi|13183699|gb|AAK15306.1|AF327733_3 YacP [Staphylococcus aureus subsp. aureus str. Newman]
gi|21203653|dbj|BAB94353.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49243840|emb|CAG42265.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285595|gb|AAW37689.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
COL]
gi|82655771|emb|CAI80171.1| conserved hypothetical protein [Staphylococcus aureus RF122]
gi|87126455|gb|ABD20969.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201853|gb|ABD29663.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373507|dbj|BAF66767.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160367581|gb|ABX28552.1| hypothetical protein USA300HOU_0526 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253729469|gb|EES98198.1| protein of hypothetical function DUF901 [Staphylococcus aureus
subsp. aureus TCH130]
gi|257859608|gb|EEV82458.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|259162315|gb|EEW46888.1| hypothetical protein SAD30_0369 [Staphylococcus aureus D30]
gi|269940105|emb|CBI48481.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282320151|gb|EFB50496.1| hypothetical protein SATG_01952 [Staphylococcus aureus subsp.
aureus D139]
gi|282592857|gb|EFB97861.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|283459835|gb|EFC06925.1| YacP [Staphylococcus aureus subsp. aureus H19]
gi|283469825|emb|CAQ49036.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ST398]
gi|294822820|gb|EFG39255.1| hypothetical protein SKAG_02400 [Staphylococcus aureus A9754]
gi|296886699|gb|EFH25604.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|298693864|gb|ADI97086.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300885948|gb|EFK81151.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|302750424|gb|ADL64601.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|315196656|gb|EFU27003.1| hypothetical protein CGSSa01_14585 [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141603|gb|EFW33442.1| hypothetical protein HMPREF9528_00131 [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320141769|gb|EFW33597.1| hypothetical protein HMPREF9529_02524 [Staphylococcus aureus subsp.
aureus MRSA177]
gi|323439803|gb|EGA97520.1| hypothetical protein SAO11_1361 [Staphylococcus aureus O11]
gi|323443095|gb|EGB00715.1| hypothetical protein SAO46_1002 [Staphylococcus aureus O46]
gi|329313253|gb|AEB87666.1| YacP [Staphylococcus aureus subsp. aureus T0131]
gi|329731035|gb|EGG67408.1| hypothetical protein SA21189_0786 [Staphylococcus aureus subsp.
aureus 21189]
gi|329731976|gb|EGG68332.1| hypothetical protein SA21193_1248 [Staphylococcus aureus subsp.
aureus 21193]
gi|334268164|gb|EGL86609.1| hypothetical protein SA21305_0605 [Staphylococcus aureus subsp.
aureus 21305]
gi|341841188|gb|EGS82651.1| hypothetical protein SA21235_0905 [Staphylococcus aureus subsp.
aureus 21235]
gi|341843805|gb|EGS85026.1| hypothetical protein SA21266_0349 [Staphylococcus aureus subsp.
aureus 21266]
gi|341844380|gb|EGS85597.1| hypothetical protein SA21259_0582 [Staphylococcus aureus subsp.
aureus 21259]
gi|341850501|gb|EGS91619.1| hypothetical protein SA21269_1001 [Staphylococcus aureus subsp.
aureus 21269]
gi|359829612|gb|AEV77590.1| Hypothetical protein M013TW_0517 [Staphylococcus aureus subsp.
aureus M013]
gi|364521787|gb|AEW64537.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|365167742|gb|EHM59119.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21209]
gi|365170664|gb|EHM61625.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21178]
gi|365227499|gb|EHM68693.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
VCU006]
gi|365236345|gb|EHM77241.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21331]
gi|365237708|gb|EHM78553.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21334]
gi|365243922|gb|EHM84590.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21340]
gi|365244333|gb|EHM84994.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21232]
gi|371977392|gb|EHO94663.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21262]
gi|371981755|gb|EHO98917.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21333]
gi|371985483|gb|EHP02551.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21283]
gi|374362511|gb|AEZ36616.1| hypothetical protein SAVC_02250 [Staphylococcus aureus subsp.
aureus VC40]
gi|375017808|gb|EHS11411.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-24]
gi|375026184|gb|EHS19570.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-91]
gi|375027255|gb|EHS20620.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-55]
gi|375033425|gb|EHS26618.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-88]
gi|375037637|gb|EHS30656.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-111]
gi|375368111|gb|EHS72038.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-125]
gi|375369599|gb|EHS73472.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-157]
gi|375372474|gb|EHS76214.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-189]
gi|375377652|gb|EHS81103.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-160]
gi|377696450|gb|EHT20805.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377719221|gb|EHT43391.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377724579|gb|EHT48694.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|377737760|gb|EHT61769.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377741811|gb|EHT65796.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377746055|gb|EHT70026.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377766639|gb|EHT90472.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377771243|gb|EHT94997.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|377771890|gb|EHT95643.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|379991885|gb|EIA13347.1| Putative cytosolic protein [Staphylococcus aureus subsp. aureus
DR10]
gi|383971368|gb|EID87446.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CO-23]
gi|384229583|gb|AFH68830.1| putative cytosolic protein [Staphylococcus aureus subsp. aureus
71193]
gi|394330214|gb|EJE56306.1| hypothetical protein Newbould305_1058 [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|404439408|gb|AFR72601.1| hypothetical protein C248_0606 [Staphylococcus aureus 08BA02176]
gi|421956985|gb|EKU09309.1| Hypothetical protein CN79_0513 [Staphylococcus aureus CN79]
gi|436431902|gb|ELP29254.1| hypothetical protein SASA_00160 [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436505880|gb|ELP41739.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21282]
gi|443409720|gb|ELS68212.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21196]
gi|445547776|gb|ELY16038.1| hypothetical protein C429_1481 [Staphylococcus aureus KT/314250]
gi|445562736|gb|ELY18902.1| hypothetical protein C428_1227 [Staphylococcus aureus KT/Y21]
Length = 174
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SAIAKENLEEARMQLIDAIANYNAVISDEIICVFDAYDQSGVER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|427709222|ref|YP_007051599.1| hypothetical protein Nos7107_3891 [Nostoc sp. PCC 7107]
gi|427361727|gb|AFY44449.1| protein of unknown function DUF901 [Nostoc sp. PCC 7107]
Length = 183
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM 98
+A VLLVDGYN+ G WP L+N L+ AR +L+E ++ +S + + +VFDA
Sbjct: 4 SSAPAVLLVDGYNIIGAWPCLKNTRDSAGLEAARGELVEAMIGYSSFQGYETQIVFDAQY 63
Query: 99 SGLPTHKE---EFIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQH 151
+++E E + V G+T AD +IEK +LR ++ V TSD QQ
Sbjct: 64 HNASSNREVITELVSVYYTDFGQT-ADTYIEKFCASLRPQIAASRVSRMIVATSDRAQQL 122
Query: 152 AAYGAGAFVWSSKALVSEVSLII 174
G GA S++ L + V +
Sbjct: 123 VVQGYGAEWLSAQQLCNAVETTV 145
>gi|445060490|ref|YP_007385894.1| hypothetical protein A284_10685 [Staphylococcus warneri SG1]
gi|443426547|gb|AGC91450.1| hypothetical protein A284_10685 [Staphylococcus warneri SG1]
Length = 175
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR++LI+ + ++ + ++V VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SKIAKENLEEAREQLIDAIANYNAVIADEIVCVFDAYEQSGIER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + V VF E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHSVKTVFTKEKETADSFIERYVYELYDKHTTHITVVTSDMSEQHAIFGSGAYRVSS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|422857613|ref|ZP_16904263.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK1057]
gi|327462796|gb|EGF09118.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK1057]
Length = 171
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVTVVFTEEEETADDYIERLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|422877297|ref|ZP_16923767.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK1056]
gi|332359936|gb|EGJ37750.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK1056]
Length = 173
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVKVVFTEEEETADDYIERLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|417918628|ref|ZP_12562178.1| hypothetical protein HMPREF9962_0094 [Streptococcus parasanguinis
SK236]
gi|342828298|gb|EGU62672.1| hypothetical protein HMPREF9962_0094 [Streptococcus parasanguinis
SK236]
Length = 170
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMIAFWQETRQLFQKSELDAARNILLQKLSHYASFEGIEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V +VF GE AD +IE+ + A +V V TSD +Q + GA
Sbjct: 65 QTYKEF-NVQVVFTGEDETADDYIER-LAAELNTPLHQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSLI 173
S++ L V+++
Sbjct: 123 SARELEKRVAVV 134
>gi|315221312|ref|ZP_07863235.1| conserved hypothetical protein [Streptococcus anginosus F0211]
gi|315189671|gb|EFU23363.1| conserved hypothetical protein [Streptococcus anginosus F0211]
Length = 174
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + + F KG LD AR L+ L ++ +++++ VFDA M G+
Sbjct: 5 ILLVDGYNMVAFWQETRSLFNKGELDAARTILLNRLSNYASFEKLEIICVFDAQYMPGIR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V +VF E AD +IE+ + A + +V V TSD +Q + GA
Sbjct: 65 QTYDEF-NVTVVFTEEEETADDYIER-LAAELNNPINQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSL 172
S++ L V++
Sbjct: 123 SARELEKRVAV 133
>gi|282897942|ref|ZP_06305937.1| Protein of unknown function DUF901 [Raphidiopsis brookii D9]
gi|281197086|gb|EFA71987.1| Protein of unknown function DUF901 [Raphidiopsis brookii D9]
Length = 160
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G WP L+ L+ AR L+E + +S + +VFDA P+
Sbjct: 9 ILLVDGYNIIGSWPCLKKTRDDSSLEAARYHLVELITNYSAFEGYESHIVFDAHYQNTPS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALRED--GC--PKVWVVTSDHLQQHAAYGA 156
++E +F+ V G+T AD +IEK LR C +V V TSD QQ G
Sbjct: 69 NREMITDFLTVHYTEFGQT-ADTYIEKVCAGLRHQVAQCLVSRVIVATSDRAQQLVVQGY 127
Query: 157 GAFVWSSKALVSEV 170
GA S++ L ++V
Sbjct: 128 GAEWLSARQLCNQV 141
>gi|422856500|ref|ZP_16903156.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK1]
gi|327460671|gb|EGF07006.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK1]
Length = 173
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVTVVFTEEEETADDYIERLAAKL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|304381869|ref|ZP_07364516.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|304339655|gb|EFM05602.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
Length = 174
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SAIAKENLEEARMQLIDAIANYNAVISDEIICVFDAYDQSGVER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSKQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|434387535|ref|YP_007098146.1| putative RNA-binding protein containing a PIN domain [Chamaesiphon
minutus PCC 6605]
gi|428018525|gb|AFY94619.1| putative RNA-binding protein containing a PIN domain [Chamaesiphon
minutus PCC 6605]
Length = 195
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 68/142 (47%), Gaps = 16/142 (11%)
Query: 44 VLLVDGYNVCGYWPKLENHFIK---------GRLDVARQKLIEELVEFSMIREVKVVVVF 94
VLLVDGYNV G W L + K L+ AR KL+E L+ +S + + VVF
Sbjct: 9 VLLVDGYNVIGAWTDLHDRHTKHNPLQSGSQADLEAARAKLVEALINYSAFEDYETKVVF 68
Query: 95 DALMSGLPTHKEEFI-GVDIVFPG--ETCADAWIEKEIVALRED---GCPKVWVVTSDHL 148
DA P + E + I + ET AD +IEK A R D ++ V TSD
Sbjct: 69 DAYSRDAPAYCETITPNLSIHYTDFLET-ADTYIEKFCAAFRHDLQYSASRLIVATSDRA 127
Query: 149 QQHAAYGAGAFVWSSKALVSEV 170
QQ A G GA SS L+S V
Sbjct: 128 QQLTAIGFGAEWISSLQLISNV 149
>gi|346722813|ref|YP_001180162.2| hypothetical protein [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|345106784|gb|ABP66971.2| protein of unknown function DUF901 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 170
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
+VDGYN W KL+ K L+VAR+KLI+ L +FS + ++ VVFD+ L+ G
Sbjct: 3 FMVDGYNFINAWSKLK-EIAKDDLEVARKKLIDILADFSGYKGYRITVVFDSHLVKGAQR 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
KE +++VF E AD +IEK + + VVTSD+L+Q G GA
Sbjct: 62 KKEVINNIEVVFTKEGETADNYIEKYV--YENAKYESIAVVTSDYLEQLMILGNGAVRMP 119
Query: 163 SKALVSEV 170
+ L+ E+
Sbjct: 120 PRELIYEI 127
>gi|404372661|ref|ZP_10977956.1| hypothetical protein CSBG_00031 [Clostridium sp. 7_2_43FAA]
gi|226911204|gb|EEH96405.1| hypothetical protein CSBG_00031 [Clostridium sp. 7_2_43FAA]
Length = 170
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ ++ VDGYNV WP L+ D ARQ LI+ L +S+ + K+++VFDA
Sbjct: 1 MKIIFVDGYNVINSWPNLKKQ-KDYSFDGARQSLIDSLHNYSVYEDCKIIIVFDAHKVTR 59
Query: 102 PTHKEEFI--GVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
K+E I + IVF GET AD++IE+E+ L +V+VVTSD L+Q + G
Sbjct: 60 SIEKKEDINSNISIVFTKDGET-ADSYIEREVHNLGR--RFEVYVVTSDWLEQQTIFQRG 116
Query: 158 AFVWSSKALVSEV 170
A S+ +EV
Sbjct: 117 AVRISALEFYNEV 129
>gi|434402552|ref|YP_007145437.1| putative RNA-binding protein containing a PIN domain
[Cylindrospermum stagnale PCC 7417]
gi|428256807|gb|AFZ22757.1| putative RNA-binding protein containing a PIN domain
[Cylindrospermum stagnale PCC 7417]
Length = 183
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
VLLVDGYN+ G WP L+ L+ AR +L+E + +S + + +VFDA
Sbjct: 8 AVLLVDGYNIIGAWPCLKKTRDSAGLEAARGELVETMTSYSSFQGYETQIVFDAQYQNSS 67
Query: 103 THKEEFIGVDIVFP---GETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYG 155
++KE + V+ G+T AD +IEK + R + +V V TSD QQ G
Sbjct: 68 SNKETITDLLSVYYTDFGQT-ADTYIEKSCASFRYQVAQSLISRVIVATSDRAQQLMVQG 126
Query: 156 AGAFVWSSKALVSEVSLII 174
GA S++ L EV +
Sbjct: 127 YGAEWLSAQQLCGEVEATV 145
>gi|15923522|ref|NP_371056.1| hypothetical protein SAV0532 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926210|ref|NP_373743.1| hypothetical protein SA0491 [Staphylococcus aureus subsp. aureus
N315]
gi|148266992|ref|YP_001245935.1| hypothetical protein SaurJH9_0555 [Staphylococcus aureus subsp.
aureus JH9]
gi|150393039|ref|YP_001315714.1| hypothetical protein SaurJH1_0569 [Staphylococcus aureus subsp.
aureus JH1]
gi|156978861|ref|YP_001441120.1| hypothetical protein SAHV_0530 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253315642|ref|ZP_04838855.1| hypothetical protein SauraC_05757 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255005326|ref|ZP_05143927.2| hypothetical protein SauraM_02625 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257795369|ref|ZP_05644348.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258408944|ref|ZP_05681225.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258420418|ref|ZP_05683361.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258439339|ref|ZP_05690271.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258444079|ref|ZP_05692416.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258446347|ref|ZP_05694505.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258448440|ref|ZP_05696555.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|258453796|ref|ZP_05701770.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|269202155|ref|YP_003281424.1| hypothetical protein SAAV_0494 [Staphylococcus aureus subsp. aureus
ED98]
gi|282894967|ref|ZP_06303190.1| hypothetical protein SGAG_02310 [Staphylococcus aureus A8117]
gi|282928869|ref|ZP_06336460.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|295406909|ref|ZP_06816712.1| hypothetical protein SMAG_02081 [Staphylococcus aureus A8819]
gi|296275778|ref|ZP_06858285.1| hypothetical protein SauraMR_05502 [Staphylococcus aureus subsp.
aureus MR1]
gi|297246267|ref|ZP_06930116.1| hypothetical protein SLAG_02348 [Staphylococcus aureus A8796]
gi|384863861|ref|YP_005749220.1| hypothetical protein ECTR2_486 [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|387149693|ref|YP_005741257.1| hypothetical protein SA2981_0508 [Staphylococcus aureus 04-02981]
gi|415694007|ref|ZP_11455612.1| hypothetical protein CGSSa03_13072 [Staphylococcus aureus subsp.
aureus CGS03]
gi|417650819|ref|ZP_12300584.1| hypothetical protein SA21172_2476 [Staphylococcus aureus subsp.
aureus 21172]
gi|417801363|ref|ZP_12448456.1| hypothetical protein SA21318_1166 [Staphylococcus aureus subsp.
aureus 21318]
gi|417893550|ref|ZP_12537576.1| hypothetical protein SA21201_2334 [Staphylococcus aureus subsp.
aureus 21201]
gi|418423705|ref|ZP_12996852.1| hypothetical protein MQA_01629 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418426649|ref|ZP_12999675.1| hypothetical protein MQC_01793 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418429575|ref|ZP_13002506.1| hypothetical protein MQE_02006 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418432470|ref|ZP_13005270.1| hypothetical protein MQG_02015 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418436184|ref|ZP_13008001.1| hypothetical protein MQI_01628 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418439083|ref|ZP_13010804.1| hypothetical protein MQK_01844 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418442063|ref|ZP_13013680.1| hypothetical protein MQM_02081 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418445191|ref|ZP_13016682.1| hypothetical protein MQO_02121 [Staphylococcus aureus subsp. aureus
VRS8]
gi|418448131|ref|ZP_13019536.1| hypothetical protein MQQ_01974 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418450955|ref|ZP_13022297.1| hypothetical protein MQS_02297 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418453972|ref|ZP_13025245.1| hypothetical protein MQU_02280 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418456876|ref|ZP_13028091.1| hypothetical protein MQW_02344 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418566829|ref|ZP_13131197.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21272]
gi|418639542|ref|ZP_13201787.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-3]
gi|418662553|ref|ZP_13224097.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-122]
gi|418877382|ref|ZP_13431621.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418880239|ref|ZP_13434459.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418883166|ref|ZP_13437366.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418885826|ref|ZP_13439976.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418893992|ref|ZP_13448093.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418913723|ref|ZP_13467696.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418919348|ref|ZP_13473294.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418930562|ref|ZP_13484410.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418990427|ref|ZP_13538088.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|419785937|ref|ZP_14311681.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-M]
gi|424775952|ref|ZP_18202939.1| hypothetical protein HMPREF1384_02364 [Staphylococcus aureus subsp.
aureus CM05]
gi|443637212|ref|ZP_21121297.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21236]
gi|13700423|dbj|BAB41721.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246300|dbj|BAB56694.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|147740061|gb|ABQ48359.1| protein of unknown function DUF901 [Staphylococcus aureus subsp.
aureus JH9]
gi|149945491|gb|ABR51427.1| protein of unknown function DUF901 [Staphylococcus aureus subsp.
aureus JH1]
gi|156720996|dbj|BAF77413.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257789341|gb|EEV27681.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257840295|gb|EEV64758.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257843608|gb|EEV68014.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257847676|gb|EEV71675.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257850749|gb|EEV74694.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257854941|gb|EEV77886.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257858309|gb|EEV81196.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257864052|gb|EEV86806.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262074445|gb|ACY10418.1| hypothetical protein SAAV_0494 [Staphylococcus aureus subsp. aureus
ED98]
gi|282589477|gb|EFB94566.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282762649|gb|EFC02786.1| hypothetical protein SGAG_02310 [Staphylococcus aureus A8117]
gi|285816232|gb|ADC36719.1| Hypothetical protein DUF901 [Staphylococcus aureus 04-02981]
gi|294968140|gb|EFG44166.1| hypothetical protein SMAG_02081 [Staphylococcus aureus A8819]
gi|297176865|gb|EFH36123.1| hypothetical protein SLAG_02348 [Staphylococcus aureus A8796]
gi|312829028|emb|CBX33870.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128825|gb|EFT84824.1| hypothetical protein CGSSa03_13072 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329727941|gb|EGG64390.1| hypothetical protein SA21172_2476 [Staphylococcus aureus subsp.
aureus 21172]
gi|334276889|gb|EGL95132.1| hypothetical protein SA21318_1166 [Staphylococcus aureus subsp.
aureus 21318]
gi|341854321|gb|EGS95192.1| hypothetical protein SA21201_2334 [Staphylococcus aureus subsp.
aureus 21201]
gi|371983574|gb|EHP00716.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21272]
gi|375017182|gb|EHS10804.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-3]
gi|375036052|gb|EHS29139.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-122]
gi|377696090|gb|EHT20446.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377698340|gb|EHT22688.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377716279|gb|EHT40462.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377716429|gb|EHT40611.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377722549|gb|EHT46674.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377727124|gb|EHT51231.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377732677|gb|EHT56727.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377758329|gb|EHT82214.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377767313|gb|EHT91111.1| yacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
CIGC348]
gi|383361746|gb|EID39112.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-M]
gi|387720922|gb|EIK08813.1| hypothetical protein MQE_02006 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387721087|gb|EIK08974.1| hypothetical protein MQC_01793 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387722497|gb|EIK10295.1| hypothetical protein MQA_01629 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387727536|gb|EIK15049.1| hypothetical protein MQG_02015 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387729544|gb|EIK16979.1| hypothetical protein MQI_01628 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387731584|gb|EIK18866.1| hypothetical protein MQK_01844 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387738387|gb|EIK25430.1| hypothetical protein MQO_02121 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387739638|gb|EIK26634.1| hypothetical protein MQQ_01974 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387739800|gb|EIK26783.1| hypothetical protein MQM_02081 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387746903|gb|EIK33623.1| hypothetical protein MQS_02297 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387748313|gb|EIK35002.1| hypothetical protein MQU_02280 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387749118|gb|EIK35762.1| hypothetical protein MQW_02344 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402346731|gb|EJU81808.1| hypothetical protein HMPREF1384_02364 [Staphylococcus aureus subsp.
aureus CM05]
gi|408422963|emb|CCJ10374.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408424951|emb|CCJ12338.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408426940|emb|CCJ14303.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408428928|emb|CCJ26093.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408430916|emb|CCJ18231.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408432910|emb|CCJ20195.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408434899|emb|CCJ22159.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408436884|emb|CCJ24127.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|443406090|gb|ELS64675.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21236]
Length = 174
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SAIAKENLEEARMQLIDAIANYNAVISDEIICVFDAYDQSGVER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHIAVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|406027302|ref|YP_006726134.1| hypothetical protein LBUCD034_1524 [Lactobacillus buchneri CD034]
gi|405125791|gb|AFS00552.1| hypothetical protein LBUCD034_1524 [Lactobacillus buchneri CD034]
Length = 177
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP L RL+ AR +L+ EL E+ R++ ++VVFDA+ +P
Sbjct: 5 LLIVDAYNMIGNWPHLNKLKQANRLEDARDQLLAELSEYKKYRDINMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ + F D+ + AD++IE + +++ +V V TSD +Q + AGA
Sbjct: 63 NSKSFRKFDMEIVWTSKDQTADSYIEA-LAHRKQNRFTQVIVATSDQAEQWTIFAAGALR 121
Query: 161 WSSKALVSEVS 171
++ L+ +V
Sbjct: 122 IPARELLRDVQ 132
>gi|331701827|ref|YP_004398786.1| hypothetical protein Lbuc_1469 [Lactobacillus buchneri NRRL
B-30929]
gi|329129170|gb|AEB73723.1| protein of unknown function DUF901 [Lactobacillus buchneri NRRL
B-30929]
Length = 177
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP L RL+ AR +L+ EL E+ R++ ++VVFDA+ +P
Sbjct: 5 LLIVDAYNMIGNWPHLNKLKQANRLEDARDQLLAELSEYKKYRDINMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ + F D+ + AD++IE + +++ +V V TSD +Q + AGA
Sbjct: 63 NSKSFRKFDMEIVWTSKDQTADSYIEA-LAHRKQNRFTQVIVATSDQAEQWTIFAAGALR 121
Query: 161 WSSKALVSEVS 171
++ L+ +V
Sbjct: 122 IPARELLRDVQ 132
>gi|119511424|ref|ZP_01630535.1| hypothetical protein N9414_16424 [Nodularia spumigena CCY9414]
gi|119463889|gb|EAW44815.1| hypothetical protein N9414_16424 [Nodularia spumigena CCY9414]
Length = 183
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
VLLVDGYN+ G WP L+ L+ AR +L+E + +S + + +VFDA
Sbjct: 8 AVLLVDGYNIIGAWPCLKKTRDHAGLEAARWELVEAMTNYSSFQGYETQIVFDAQYHQAS 67
Query: 103 THKE---EFIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYG 155
+++E E + V G+T AD +IEK +LR + +V V TSD QQ G
Sbjct: 68 SNQEIITELLSVHYTDFGQT-ADTYIEKSCASLRYKIAQSLIHRVIVATSDRAQQLMVQG 126
Query: 156 AGAFVWSSKALVSEVSLII 174
GA S++ L EV I
Sbjct: 127 YGAEWLSAQQLCGEVETTI 145
>gi|418654873|ref|ZP_13216766.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-99]
gi|375014270|gb|EHS07962.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-99]
Length = 174
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGRSPTL-SAIAKENLEEARMQLIDAIANYNAVISDEIICVFDAYDQSGVER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHIAVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|387779672|ref|YP_005754470.1| hypothetical protein SARLGA251_04680 [Staphylococcus aureus subsp.
aureus LGA251]
gi|344176774|emb|CCC87236.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
LGA251]
Length = 174
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SAIAKENLEEARMQLIDAIANYNAVISDEIICVFDAYDQSGVEK 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|125718826|ref|YP_001035959.1| hypothetical protein SSA_2036 [Streptococcus sanguinis SK36]
gi|422861475|ref|ZP_16908115.1| PIN domain containing protein [Streptococcus sanguinis SK330]
gi|125498743|gb|ABN45409.1| Conserved hypothetical cytosolic protein [Streptococcus sanguinis
SK36]
gi|327468343|gb|EGF13828.1| PIN domain containing protein [Streptococcus sanguinis SK330]
Length = 173
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QAYEEF-NVTVVFTEEEETADDYIERLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|401682669|ref|ZP_10814560.1| YacP-like NYN domain protein [Streptococcus sp. AS14]
gi|422825530|ref|ZP_16873709.1| PIN domain containing protein [Streptococcus sanguinis SK678]
gi|422850784|ref|ZP_16897454.1| PIN domain containing protein [Streptococcus sanguinis SK150]
gi|422853459|ref|ZP_16900123.1| PIN domain containing protein [Streptococcus sanguinis SK160]
gi|422884834|ref|ZP_16931282.1| PIN domain containing protein [Streptococcus sanguinis SK49]
gi|324996032|gb|EGC27943.1| PIN domain containing protein [Streptococcus sanguinis SK678]
gi|325695532|gb|EGD37432.1| PIN domain containing protein [Streptococcus sanguinis SK150]
gi|325697471|gb|EGD39357.1| PIN domain containing protein [Streptococcus sanguinis SK160]
gi|332359264|gb|EGJ37085.1| PIN domain containing protein [Streptococcus sanguinis SK49]
gi|400184320|gb|EJO18565.1| YacP-like NYN domain protein [Streptococcus sp. AS14]
Length = 173
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVTVVFTEEEETADDYIERLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|422847548|ref|ZP_16894231.1| PIN domain containing protein [Streptococcus sanguinis SK72]
gi|325686892|gb|EGD28917.1| PIN domain containing protein [Streptococcus sanguinis SK72]
Length = 173
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QAYEEF-NVTVVFTEEEETADDYIERLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|73663532|ref|YP_302313.1| hypothetical protein SSP2223 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72496047|dbj|BAE19368.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 173
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 8/126 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L++DGYN+ G +L + + L+ AR++L+ + ++ + +VV VFDA SG PT
Sbjct: 6 LIIDGYNMIGQSQEL-SRIAQDNLEEAREQLLIAIANYNAVIADEVVCVFDAYEQSGAPT 64
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
E++ GV +F E AD++IE+ + L + + VVTSD +QHA +GAGA+
Sbjct: 65 ---EYMYHGVKTIFTKEKETADSYIERYVYDLYDKHTRHITVVTSDMSEQHAIFGAGAYR 121
Query: 161 WSSKAL 166
SS+ +
Sbjct: 122 VSSREM 127
>gi|422879663|ref|ZP_16926128.1| PIN domain containing protein [Streptococcus sanguinis SK1059]
gi|422929509|ref|ZP_16962450.1| PIN domain containing protein [Streptococcus sanguinis ATCC 29667]
gi|422932478|ref|ZP_16965409.1| PIN domain containing protein [Streptococcus sanguinis SK340]
gi|332365572|gb|EGJ43332.1| PIN domain containing protein [Streptococcus sanguinis SK1059]
gi|339614749|gb|EGQ19439.1| PIN domain containing protein [Streptococcus sanguinis ATCC 29667]
gi|339618229|gb|EGQ22827.1| PIN domain containing protein [Streptococcus sanguinis SK340]
Length = 173
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVTVVFTEEEETADDYIERLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|422824391|ref|ZP_16872578.1| PIN domain containing protein [Streptococcus sanguinis SK405]
gi|324992440|gb|EGC24361.1| PIN domain containing protein [Streptococcus sanguinis SK405]
Length = 173
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE+ L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVTVVFTEEEETADDYIERLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|298492257|ref|YP_003722434.1| hypothetical protein Aazo_3775 ['Nostoc azollae' 0708]
gi|298234175|gb|ADI65311.1| protein of unknown function DUF901 ['Nostoc azollae' 0708]
Length = 182
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G WP L+ L+ AR +L+E + +S + + +VFDA +
Sbjct: 9 ILLVDGYNIIGAWPCLKTTRDDAGLEAARGELVEAITNYSAFQGYETQIVFDAQYQNTAS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALREDGCP----KVWVVTSDHLQQHAAYGA 156
+E +F+ V G+T AD +IEK LR +V V TSD QQ G
Sbjct: 69 KRETITDFLTVHYTDFGQT-ADTYIEKACAGLRHQIAQCLIYRVIVATSDRAQQLMVQGY 127
Query: 157 GAFVWSSKALVSEV 170
GA S++ L EV
Sbjct: 128 GAEWLSAQQLCGEV 141
>gi|282899271|ref|ZP_06307242.1| protein of unknown function DUF901 [Cylindrospermopsis raciborskii
CS-505]
gi|281195840|gb|EFA70766.1| protein of unknown function DUF901 [Cylindrospermopsis raciborskii
CS-505]
Length = 182
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G WP L+ ++ AR L+E + +S + +VFDA P+
Sbjct: 9 ILLVDGYNIIGSWPCLKKTRDDSSMEAARDHLVELITNYSAFEGYESHIVFDAHYQNTPS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALRED--GC--PKVWVVTSDHLQQHAAYGA 156
++E +F+ V G+T AD +IEK LR C +V V TSD QQ G
Sbjct: 69 NREMITDFLTVHYTEFGQT-ADTYIEKVCAGLRHQVAQCLVSRVIVATSDRAQQLVVQGY 127
Query: 157 GAFVWSSKALVSEV 170
GA S++ L ++V
Sbjct: 128 GAEWLSARQLCNQV 141
>gi|452994190|emb|CCQ94249.1| conserved hypothetical protein [Clostridium ultunense Esp]
Length = 177
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM-SGLPT 103
L VDGYN+ W L L+VAR++LIE + E+ +KV+VVFDA M G
Sbjct: 12 LFVDGYNIINSWSNLR-ELSNLNLEVAREELIETMAEYQHYSGIKVIVVFDAHMVKGNAG 70
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
KE GV++++ E AD +IEK + + +V V TSD ++Q G G S
Sbjct: 71 KKEMVKGVEVIYTKENETADQYIEKTLDDI--GRIKRVRVATSDWMEQQIVLGRGGTRVS 128
Query: 163 SKALVSEV 170
++ L E+
Sbjct: 129 ARELEVEI 136
>gi|28212188|ref|NP_783132.1| tetracycline resistance protein [Clostridium tetani E88]
gi|28204632|gb|AAO37069.1| tetracycline resistance protein [Clostridium tetani E88]
Length = 170
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 14/139 (10%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFDALMSG 100
+ + VDGYNV WP+L+ IK L+ +R+KL+E L +S + KV +VFDA M
Sbjct: 1 MKTIFVDGYNVINSWPELKE--IKDYSLESSRKKLMEILQNYSTYKGYKVFLVFDAHMVD 58
Query: 101 LPTHKEEFIGVDIVF----PGETCADAWIEKEI--VALREDGCPKVWVVTSDHLQQHAAY 154
K+E G +++ GET AD++IEK++ + + D C VVTSD ++Q +
Sbjct: 59 KSIEKKERCGENLIIVFTKEGET-ADSYIEKKVNNIGRKRDVC----VVTSDSMEQQVIF 113
Query: 155 GAGAFVWSSKALVSEVSLI 173
GA SS E+ ++
Sbjct: 114 QRGAIRMSSLEFYHEIKVV 132
>gi|242372750|ref|ZP_04818324.1| protein of hypothetical function DUF901 [Staphylococcus epidermidis
M23864:W1]
gi|242349523|gb|EES41124.1| protein of hypothetical function DUF901 [Staphylococcus epidermidis
M23864:W1]
Length = 175
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR++L++ + ++ + ++V VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SAVAKESLEEAREQLLDAIANYNALIADEIVCVFDAYEQSGIER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV VF E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYVYHGVKTVFTKEKETADSFIERYVYELYDKHTTHITVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|308070994|ref|YP_003872599.1| hypothetical protein PPE_04297 [Paenibacillus polymyxa E681]
gi|305860273|gb|ADM72061.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 173
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP+L + ++ + AR +L+E L + +V+VVFDA M +P
Sbjct: 7 VLLVDGYNMIGAWPEL-SALVQSGMQEARDRLLERLADHQAYSGRRVIVVFDAYM--VPG 63
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ F V I F E AD IE+ + L ++V TSD ++QH A+G GA
Sbjct: 64 LGKTFAQSKVQIYFTREKETADECIERLVREL-SSKRRSIYVATSDQVEQHVAFGQGALR 122
Query: 161 WSSK 164
S++
Sbjct: 123 VSAR 126
>gi|379795004|ref|YP_005325002.1| hypothetical protein SAMSHR1132_04770 [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356871994|emb|CCE58333.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 174
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SAIAKENLEEARLQLIDAIANYNAVISDEIICVFDAYEQSGIER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|319891497|ref|YP_004148372.1| hypothetical protein SPSINT_0207 [Staphylococcus pseudintermedius
HKU10-03]
gi|317161193|gb|ADV04736.1| Hypothetical protein SPSINT_0207 [Staphylococcus pseudintermedius
HKU10-03]
Length = 162
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 65 KGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGE-TCADA 123
K L+ AR++L+ E+ +S + + K+V VFDA G P + E+ GV +VF E AD+
Sbjct: 13 KESLEEAREQLLIEISNYSAVTKGKIVCVFDAYDRGTPQSEYEYHGVHVVFTKEHETADS 72
Query: 124 WIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKAL 166
+IE+ + + + VVTSD +QHA +G GA+ SS+ +
Sbjct: 73 FIERYVYNIYNKHTTHITVVTSDMSEQHAIFGTGAYRLSSREM 115
>gi|433461673|ref|ZP_20419279.1| hypothetical protein D479_08873 [Halobacillus sp. BAB-2008]
gi|432189845|gb|ELK46910.1| hypothetical protein D479_08873 [Halobacillus sp. BAB-2008]
Length = 169
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSG 100
+ VL+VDGYN+ G WP+L + L AR LIE + E+ ++++VFDA + G
Sbjct: 1 MNVLIVDGYNMIGAWPELVK-LKEKDLGQARDLLIEMMAEYQSYTGDRIMIVFDAYHVRG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
L ++ + V+++F E AD IEK + D +V+V TSD+ +Q +G GAF
Sbjct: 60 LEKKQQNY-KVEVLFTKENETADERIEK-LAGELNDVRTQVYVATSDYAEQRTIFGQGAF 117
Query: 160 VWSSKALVSEVSLI 173
S++ L EV I
Sbjct: 118 RKSARELYIEVKNI 131
>gi|226309788|ref|YP_002769682.1| hypothetical protein BBR47_02010 [Brevibacillus brevis NBRC 100599]
gi|226092736|dbj|BAH41178.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 174
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 41 AVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MS 99
A +L+VDGYN+ G WP L + R+D AR +LI ++ E+ V V++VFDA +
Sbjct: 6 AKQLLIVDGYNIIGAWPDLRLLKDQERMDEARDQLIAKMAEYQSYTGVMVIIVFDAYNVP 65
Query: 100 GLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
G E+F V++ F + AD IE ++V+ + +++V TSD+ Q +G GA
Sbjct: 66 GSGRQMEDF-QVEVYFTKKKETADEKIE-QLVSQFHNKNRQIYVATSDYTSQRVIFGQGA 123
Query: 159 FVWSSKALV 167
S++ L+
Sbjct: 124 LRKSARELL 132
>gi|410666866|ref|YP_006919237.1| hypothetical protein Tph_c04960 [Thermacetogenium phaeum DSM 12270]
gi|409104613|gb|AFV10738.1| hypothetical protein Tph_c04960 [Thermacetogenium phaeum DSM 12270]
Length = 176
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYNV WP+ ++ + L AR +LI L EF ++V+VVFDA + G
Sbjct: 4 ILLVDGYNVISSWPEFKD-LKEAELAHARDRLIAILSEFRAFCGMRVIVVFDAHQVKGGT 62
Query: 103 THKEEFIGVDIVFP--GETCADAWIEKEIVALREDGC---PKVWVVTSDHLQQHAAYGAG 157
E+ G+++V+ GET AD WIEK R +G P ++VVT D L+Q G
Sbjct: 63 EQCEQCQGIEVVYTKEGET-ADNWIEKFAARQRREGTPGKPPLFVVTYDWLEQRIISAQG 121
Query: 158 AFVWSSKALVSEVS 171
A+ + + L E+
Sbjct: 122 AYRITPEELRREIQ 135
>gi|83591296|ref|YP_431305.1| hypothetical protein Moth_2480 [Moorella thermoacetica ATCC 39073]
gi|83574210|gb|ABC20762.1| Protein of unknown function DUF901 [Moorella thermoacetica ATCC
39073]
Length = 166
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ VL+VDGYN WP+L + D AR KLI EL+ + KV+VVFDA + G
Sbjct: 1 MDVLIVDGYNFLHNWPEL-TRLKESSFDHARDKLITELINYQAYWGGKVIVVFDAHKVPG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+E+ GV++++ GE ADA IE+ + + E G +V+V TSD +Q G GA
Sbjct: 60 AVEKREKLGGVEVIYSGEGETADAVIERLVGDITETG--QVYVATSDWAEQRMILGKGAL 117
>gi|344997047|ref|YP_004799390.1| hypothetical protein Calla_1831 [Caldicellulosiruptor lactoaceticus
6A]
gi|343965266|gb|AEM74413.1| protein of unknown function DUF901 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 168
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L+VDGYN W L + LD AR+KLI+ L +FS + K+ +VFD+ L+ G
Sbjct: 3 LMVDGYNFINAWENLRK-IAEDDLDSARKKLIDILADFSGYKGYKITIVFDSHLVKGAMR 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+E V+++F E AD +IE+ + + K+ VVTSD+L+Q G GA
Sbjct: 62 KRETISNVEVIFTKEGETADNYIEQYV--YKNSKNEKIGVVTSDYLEQLIILGDGALRIP 119
Query: 163 SKALVSEV 170
+ L+ E+
Sbjct: 120 PRELIYEI 127
>gi|354557112|ref|ZP_08976371.1| small GTP-binding protein [Desulfitobacterium metallireducens DSM
15288]
gi|353550697|gb|EHC20126.1| small GTP-binding protein [Desulfitobacterium metallireducens DSM
15288]
Length = 880
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L+ + +D AR KL++ L + IR+ +++VVFDA + H
Sbjct: 715 LLVDGYNIIHAWPELKA-LVDENMDGARMKLLDSLSNYQGIRKCQIIVVFDAYR--VQGH 771
Query: 105 KEE---FIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
EE ++ + IVF E AD +IE+ AL + V TSD L+Q GAG +
Sbjct: 772 FEEVIDYLNIHIVFTREAQTADQYIER--FALGNQKRYNITVATSDGLEQLIIRGAGCSL 829
Query: 161 WSSKALVSEV 170
S++ L E+
Sbjct: 830 LSARELKIEI 839
>gi|253731137|ref|ZP_04865302.1| protein of hypothetical function DUF901 [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|386830176|ref|YP_006236830.1| hypothetical protein SAEMRSA15_04590 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417798462|ref|ZP_12445628.1| hypothetical protein SA21310_2070 [Staphylococcus aureus subsp.
aureus 21310]
gi|418599366|ref|ZP_13162855.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21343]
gi|418656922|ref|ZP_13218706.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-105]
gi|253725102|gb|EES93831.1| protein of hypothetical function DUF901 [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|334275792|gb|EGL94067.1| hypothetical protein SA21310_2070 [Staphylococcus aureus subsp.
aureus 21310]
gi|374397473|gb|EHQ68683.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
21343]
gi|375031922|gb|EHS25182.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-105]
gi|385195568|emb|CCG15177.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
Length = 174
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G P L + K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGQSPTL-SAIAKENLEEARIQLIDAIANYNAVISDEIICVFDAYDQSGVER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|307155299|ref|YP_003890683.1| hypothetical protein Cyan7822_5535 [Cyanothece sp. PCC 7822]
gi|306985527|gb|ADN17408.1| protein of unknown function DUF901 [Cyanothece sp. PCC 7822]
Length = 182
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G W L+ + L+ AR++L+E L+ ++ + VVFDA P+
Sbjct: 9 LLLVDGYNIIGSWSSLKQIHEQRGLESARRELVENLINYTAHQGYHTQVVFDAQYQKTPS 68
Query: 104 HKEEFI-GVDIVFPG-ETCADAWIEKEIVALREDG---CPKVWVVTSDHLQQHAAYGAGA 158
+E+F + + + AD +IEK + C ++ V TSDH Q+ G GA
Sbjct: 69 TEEQFTPNLSVYYTAFAQTADTYIEKICASFYRQSFSKCSRIIVATSDHAQRLTIIGYGA 128
Query: 159 FVWSSKALVSEVSLI 173
S++ L +V +
Sbjct: 129 EWMSAQRLAHDVDFV 143
>gi|427727737|ref|YP_007073974.1| putative RNA-binding protein containing a PIN domain [Nostoc sp.
PCC 7524]
gi|427363656|gb|AFY46377.1| putative RNA-binding protein containing a PIN domain [Nostoc sp.
PCC 7524]
Length = 183
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP L+ L+ AR +L+E + +S + +VFDA +
Sbjct: 9 VLLVDGYNIIGAWPCLKKTRDYSGLEAARGELVEAMTSYSAFQAYDTQIVFDAHYQNTSS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYGA 156
++E E + V G+T AD +IEK +LR + +V V TSD QQ G
Sbjct: 69 NREVITELVSVHYTDFGQT-ADTYIEKICASLRPQITQTRISRVIVATSDRAQQLTVQGY 127
Query: 157 GAFVWSSKALVSEVSLII 174
GA S++ L EV +
Sbjct: 128 GAEWLSAQQLCWEVEATV 145
>gi|323350496|ref|ZP_08086158.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
VMC66]
gi|422822441|ref|ZP_16870634.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK353]
gi|322123178|gb|EFX94863.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
VMC66]
gi|324989711|gb|EGC21654.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK353]
Length = 171
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++L ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKLSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
EEF V +VF E AD +IE L PK V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVTVVFTEEEETADDYIESLAAEL---NTPKNQVSVATSDLNEQWTVFAQGAL 120
Query: 160 VWSSKALVSEVSL 172
S++ L V++
Sbjct: 121 RVSARELEKRVAV 133
>gi|23097557|ref|NP_691023.1| hypothetical protein OB0102 [Oceanobacillus iheyensis HTE831]
gi|22775780|dbj|BAC12058.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 169
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
VL+VDGYNV G W +L+ + + AR +LIE L E+ V++VFDA
Sbjct: 3 EVLIVDGYNVIGAWGELQ-RLKEKEIGQARDRLIEVLAEYQAFTGKHVILVFDAYYVRGV 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+K++ ++I++ E AD IEK +V ++ +V+V TSD+ +Q +G GA
Sbjct: 62 ENKQQKFNIEIIYTKEKETADECIEK-LVKEVKNIQTQVYVATSDYAEQRTIFGQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L+ EV
Sbjct: 121 SARELLIEVQ 130
>gi|375085577|ref|ZP_09732210.1| hypothetical protein HMPREF9454_00821 [Megamonas funiformis YIT
11815]
gi|374567182|gb|EHR38412.1| hypothetical protein HMPREF9454_00821 [Megamonas funiformis YIT
11815]
Length = 187
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
++VDGYN+ W L+ FI LD AR+KLI L+E+ + + +VFDA + +
Sbjct: 17 MVVDGYNIINAWESLKK-FINDDLDFAREKLIHLLMEYGQYEKYDITIVFDAQYTNAEEN 75
Query: 105 KEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EE +V+ E AD++IE+ + + +V+VVTSD +Q GAGA+ S
Sbjct: 76 VEEISKHCKVVYTKEKETADSYIERSVYEATKYYGREVYVVTSDGAEQSLILGAGAYRIS 135
Query: 163 SKAL 166
+ L
Sbjct: 136 ANEL 139
>gi|406671562|ref|ZP_11078801.1| hypothetical protein HMPREF9706_01061 [Facklamia hominis CCUG
36813]
gi|405580812|gb|EKB54871.1| hypothetical protein HMPREF9706_01061 [Facklamia hominis CCUG
36813]
Length = 183
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L VDGYN+ G WP+L K + AR +L+ L ++ R++K++VVFDA +SGL
Sbjct: 8 ILWVDGYNMIGSWPELARLQRKNEIAQARDRLLFILSDYQKYRDIKIIVVFDAQFVSGLS 67
Query: 103 THKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K+ IG +++V+ E AD++IEKE V +V V TSD +Q + GA
Sbjct: 68 --KQVNIGQIEVVYTQENQTADSYIEKE-VGRWISPLNRVVVATSDQAEQWLIFQKGALR 124
Query: 161 WSSKALVSEV 170
S++ L+ EV
Sbjct: 125 MSAQELLLEV 134
>gi|390441288|ref|ZP_10229420.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389835416|emb|CCI33546.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 203
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 27 FFSYIYNTNQGIDNAV------PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELV 80
FF+ N Q A+ +LLVDGYNV G WP L+ + L+ AR KLIE L+
Sbjct: 3 FFTTALNATQITLKAMLNSSDRSLLLVDGYNVIGAWPSLKKISDRHGLEPARDKLIETLI 62
Query: 81 EFSMIREVKVVVVFDALMSGLPTHKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP 138
++ + + +VFD+ + P +E + + + F AD +IEK + P
Sbjct: 63 GYTHHQGYQTQIVFDSYLQDTPGSQERYTNHLSVYFTAHAQTADTYIEKTCADFWYNRAP 122
Query: 139 ---KVWVVTSDHLQQHAAYGAGAFVWSSKALVSEVSL 172
++ V TSD+ Q+ G GA S++ L EV L
Sbjct: 123 AIGRIIVATSDNAQKMTVMGYGAQWISAQRLEIEVDL 159
>gi|402573357|ref|YP_006622700.1| small GTP-binding protein domain-containing protein
[Desulfosporosinus meridiei DSM 13257]
gi|402254554|gb|AFQ44829.1| small GTP-binding protein domain protein [Desulfosporosinus
meridiei DSM 13257]
Length = 882
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L+ + +D AR KL++ L + IR +++VVFDA + H
Sbjct: 714 LLVDGYNIIHAWPELK-ELTEDNMDGARMKLLDTLSNYQGIRRCQIIVVFDAYR--VQGH 770
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGA 158
EE I + VF E AD +IEK D K + V TSD LQQ GAG+
Sbjct: 771 FEEVIDYHNIHTVFTREAQTADQYIEK----FAHDNQKKYDITVATSDGLQQLIIRGAGS 826
Query: 159 FVWSSKALVSEV 170
++S++ L E+
Sbjct: 827 ALFSARELKVEI 838
>gi|294496965|ref|YP_003560665.1| hypothetical protein BMQ_0118 [Bacillus megaterium QM B1551]
gi|294346902|gb|ADE67231.1| protein of unknown function (DUF901) [Bacillus megaterium QM B1551]
Length = 169
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 42 VPVLLVDGYNVCGYWP---KLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM 98
+ +LLVD YN+ G WP KL ++ + G AR LIE++ E+ +V++VFDA M
Sbjct: 1 MDILLVDDYNMIGAWPDLRKLRDNDLAG----ARDLLIEKMAEYQAYMGYRVIIVFDAHM 56
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
K + VD+VF E AD +IEK L + ++ V TSD +Q A +G G
Sbjct: 57 VEGIEKKAKNHKVDVVFTRENETADEYIEKLAQEL-NNVKTQIHVATSDFTEQWAIFGQG 115
Query: 158 AFVWSSKALVSEVSLI 173
A S++ L +E+ I
Sbjct: 116 ALRISARELYNEIEQI 131
>gi|319654850|ref|ZP_08008925.1| YacP protein [Bacillus sp. 2_A_57_CT2]
gi|317393413|gb|EFV74176.1| YacP protein [Bacillus sp. 2_A_57_CT2]
Length = 169
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +LLVDGYN+ G WP+L L AR +LIE++ E+ +V++VFDA
Sbjct: 1 MDILLVDGYNIIGAWPEL-RELKNKDLSSARDRLIEKMAEYQGYSGYRVIIVFDAHYVKG 59
Query: 102 PTHKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V+++F AD IEK + L + ++ V TSD +Q +G GA
Sbjct: 60 TEKKFKDSKVEVIFTRNNETADERIEKLAIDL-SNIKTQIHVATSDFTEQWVIFGQGALR 118
Query: 161 WSSKALVSEVSLI 173
S++ L++E++LI
Sbjct: 119 KSARELLNEMNLI 131
>gi|410727958|ref|ZP_11366151.1| putative RNA-binding protein [Clostridium sp. Maddingley MBC34-26]
gi|410597518|gb|EKQ52129.1| putative RNA-binding protein [Clostridium sp. Maddingley MBC34-26]
Length = 170
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMS 99
+ + VDGYNV WP L+ + + ARQ LI++L + + + K+++VFDA ++
Sbjct: 1 MKTIFVDGYNVINSWPDLKQKK-ESSFEDARQTLIDKLHNYGVFKACKIILVFDAHKVIG 59
Query: 100 GLPTHKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
L +E + ++F GET AD++IEK++ AL ++ VVTSD+L+Q + G
Sbjct: 60 SLEKKEEINKNISVIFTKDGET-ADSYIEKKVNALGRK--HEIVVVTSDNLEQQTVFQRG 116
Query: 158 AFVWSS 163
A SS
Sbjct: 117 AVRMSS 122
>gi|410461724|ref|ZP_11315370.1| hypothetical protein BAZO_20673 [Bacillus azotoformans LMG 9581]
gi|409925491|gb|EKN62702.1| hypothetical protein BAZO_20673 [Bacillus azotoformans LMG 9581]
Length = 169
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ VL+VDGYN+ G WP+L K AR KLIE++ E+ +V++VFDA + G
Sbjct: 1 MDVLIVDGYNIIGAWPELR-ELKKTDFAGARDKLIEKMAEYKAFTGYRVIIVFDAHQVPG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ T K V++++ E AD IEK L + ++ V TSD+ +Q +G GA
Sbjct: 60 IET-KTTNHNVEVIYTKENEIADERIEKMANELN-NIKTQIHVATSDYTEQWVVFGQGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L++E++ I
Sbjct: 118 RKSARELLNEMNSI 131
>gi|333394602|ref|ZP_08476421.1| hypothetical protein LcorcK3_02197 [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
gi|336392003|ref|ZP_08573402.1| hypothetical protein LcortK3_04357 [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 175
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VL++DGYNV G WP+L+ +L AR L+ +L EF + ++++VFDA+ T
Sbjct: 5 VLIIDGYNVIGNWPELDKLKQDDKLADARDDLLAQLAEFRKYEDAEIILVFDAMYVPGIT 64
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + + +V+ E AD++IEK + ++ +V VVTSD +Q + GA S
Sbjct: 65 QRYDQYNLQVVWTQEDQTADSYIEK-LAGDLQNRLTQVTVVTSDQAEQWTIFSRGAVRIS 123
Query: 163 SK 164
S+
Sbjct: 124 SR 125
>gi|345021349|ref|ZP_08784962.1| hypothetical protein OTW25_08484 [Ornithinibacillus scapharcae
TW25]
Length = 169
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
VL+VDGYN+ G W +L K + AR +LIE + E+ +V++VFDA + G+
Sbjct: 3 VLIVDGYNIIGDWEEL-RRLKKKDMSQARDRLIELMAEYQAYSGARVIIVFDAYYVRGIE 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +++ V+++F E AD IE+ + L+ + +V+V TSD+ +Q +G GA
Sbjct: 62 SKLKQY-RVEVIFTKEKETADECIERLVKKLK-NVKTQVYVATSDYTEQRVTFGQGALRK 119
Query: 162 SSKALVSE 169
S++ L E
Sbjct: 120 SARELAIE 127
>gi|357051594|ref|ZP_09112768.1| hypothetical protein HMPREF9478_02751 [Enterococcus saccharolyticus
30_1]
gi|355379518|gb|EHG26675.1| hypothetical protein HMPREF9478_02751 [Enterococcus saccharolyticus
30_1]
Length = 172
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
P+L+VDGYN+ G WP+L + RL+ AR+ L+ L +S +K++VVFDA +
Sbjct: 3 TPLLIVDGYNMIGAWPELVLLKNQDRLEDAREALLHRLSNYSKYEGLKIIVVFDAQLVPG 62
Query: 102 PTHKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
T + ++F GET AD++IE+ I D +V V TSD +Q + GA
Sbjct: 63 VTQSYSKYQLQVIFTEEGET-ADSYIER-IAGELNDRLTQVTVATSDLAEQWVVFSQGAL 120
Query: 160 VWSSKALVSEV 170
S++ L +
Sbjct: 121 RTSARELYKSI 131
>gi|366087748|ref|ZP_09454233.1| PIN domain-containing protein [Lactobacillus zeae KCTC 3804]
Length = 179
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYNV G WP+L + DVAR +L++ L E+ K++VVFDA+ +P
Sbjct: 5 ILIVDGYNVIGNWPELAKLKAEDHFDVARDRLLDILAEYRSHENAKIIVVFDAMY--VPG 62
Query: 104 HKEEFIGVD--IVFPGET-CADAWIEKEIVALREDGCPKVW--VVTSDHLQQHAAYGAGA 158
+ + D +VF E AD++IE+ +E P V VVTSD +Q + GA
Sbjct: 63 IGKSYAKWDLQVVFTKEDETADSYIER---LAQEMNSPLVQLVVVTSDQAEQWTVFSRGA 119
Query: 159 FVWSSKALVSEVS 171
SS+ + EV
Sbjct: 120 LRISSRDFLKEVQ 132
>gi|420146262|ref|ZP_14653691.1| Hypothetical protein A11Y_170527 [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402041|gb|EJN55437.1| Hypothetical protein A11Y_170527 [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 175
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VL++DGYNV G WP+L+ +L AR L+ +L EF + ++++VFDA+ T
Sbjct: 5 VLIIDGYNVIGNWPELDKLKQDDKLADARDDLLAQLAEFRKYEDAEIILVFDAMYVPGIT 64
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + + +V+ E AD++IEK + ++ +V VVTSD +Q + GA S
Sbjct: 65 QRYDQYNLQVVWTQEDQTADSYIEK-LAGDLQNRLTQVTVVTSDQAEQWTIFSRGAVRIS 123
Query: 163 SK 164
S+
Sbjct: 124 SR 125
>gi|428212341|ref|YP_007085485.1| putative RNA-binding protein containing a PIN domain [Oscillatoria
acuminata PCC 6304]
gi|428000722|gb|AFY81565.1| putative RNA-binding protein containing a PIN domain [Oscillatoria
acuminata PCC 6304]
Length = 181
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS 99
+A P+LLVDGYN+ G W KL+ L+ +R++LIE L+ +S + +VVFDA
Sbjct: 5 SARPLLLVDGYNIIGLWSKLKTKRDFDGLEASRRELIESLINYSAFEGLDTLVVFDAHSR 64
Query: 100 GLPTHKE---EFIGVDIVFPGETCADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAA 153
P + E + + V G+T AD +IEK R + ++ V TSD QQ
Sbjct: 65 HEPCYTEVISKSLSVCYTDFGQT-ADTYIEKTCATFRRNLGNLHRRLIVATSDRAQQQTV 123
Query: 154 YGAGA 158
G GA
Sbjct: 124 LGYGA 128
>gi|357012833|ref|ZP_09077832.1| hypothetical protein PelgB_25417 [Paenibacillus elgii B69]
Length = 171
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 25/142 (17%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA------- 96
+L+VDGYN+ G WP+L+ + RL+ AR +LIE + E+ +KV+VVFDA
Sbjct: 5 ILIVDGYNIIGSWPELQ-RLKEIRLEEARDRLIETMAEYQSFSGMKVIVVFDAYYVPGLG 63
Query: 97 ---LMSGLPTH--KEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQH 151
L + LP + KE + AD IE+ +V +V+V TSD +QH
Sbjct: 64 GKYLQNKLPVYYTKE-----------KETADELIER-LVTTHIGRRKQVYVATSDMTEQH 111
Query: 152 AAYGAGAFVWSSKALVSEVSLI 173
+G GAF + L+ +V +
Sbjct: 112 VIFGKGAFRIPASELLVKVRQV 133
>gi|218439919|ref|YP_002378248.1| hypothetical protein PCC7424_2977 [Cyanothece sp. PCC 7424]
gi|218172647|gb|ACK71380.1| protein of unknown function DUF901 [Cyanothece sp. PCC 7424]
Length = 182
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM 98
++ +LLVDGYN+ G W L+ K LD AR++LIE L+ +S + VVFDA
Sbjct: 4 SSSKALLLVDGYNIIGAWSSLKQIQEKQGLDSARRELIETLINYSAHQGYTTQVVFDAQY 63
Query: 99 SGLPTHKEEFI-GVDIVFPG-ETCADAWIEKEIVALREDGC---PKVWVVTSDHLQQHAA 153
PT +E++ + + + AD +IEK + ++ V TSDH Q+
Sbjct: 64 QKSPTTQEQYTPTLSVCYTAFAQTADTYIEKICASFFRASVGLHSRIIVATSDHAQRLTI 123
Query: 154 YGAGAFVWSSKALVSEVSLIIY 175
G GA S++ L EV + +
Sbjct: 124 VGYGAEWMSAQKLAHEVDFVAH 145
>gi|319939871|ref|ZP_08014226.1| YacP protein [Streptococcus anginosus 1_2_62CV]
gi|319810882|gb|EFW07201.1| YacP protein [Streptococcus anginosus 1_2_62CV]
Length = 174
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + + F KG LD AR L+ +L ++ +++++ VFDA M G
Sbjct: 5 ILLVDGYNMVAFWQETRSLFNKGELDAARTILLNKLSNYASFEQLEIICVFDAQYMPGAR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EF V +VF E AD +IE+ L + +V V TSD +Q + GA
Sbjct: 65 QTYDEF-NVTVVFTEEEETADDYIERLATDL-NNPRNQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSL 172
S++ L V++
Sbjct: 123 SARELEKRVAV 133
>gi|153952843|ref|YP_001393608.1| hypothetical protein CKL_0204 [Clostridium kluyveri DSM 555]
gi|219853508|ref|YP_002470630.1| hypothetical protein CKR_0165 [Clostridium kluyveri NBRC 12016]
gi|146345724|gb|EDK32260.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219567232|dbj|BAH05216.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 170
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ ++ VDGYNV WP+L N + ARQ+LIE + ++ + + +VFDA M
Sbjct: 1 MRIIFVDGYNVINSWPEL-NDIKNYSFEAARQQLIETVSNYAAYKGYSIFIVFDAHMVVG 59
Query: 102 PTHKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
K E + V+++F E AD++IEK + R +V+VVTSD L+Q + GA
Sbjct: 60 SLEKREKVSENVEVIFTKENETADSFIEKTVN--RIGRRSEVFVVTSDSLEQQITFQRGA 117
Query: 159 FVWSSKALVSEV 170
SS EV
Sbjct: 118 VRMSSIEFYHEV 129
>gi|210623157|ref|ZP_03293611.1| hypothetical protein CLOHIR_01561 [Clostridium hiranonis DSM 13275]
gi|210153790|gb|EEA84796.1| hypothetical protein CLOHIR_01561 [Clostridium hiranonis DSM 13275]
Length = 187
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMSGL 101
+L+VDGYN+ W L N K L+ +R+KLI+ ++EFS K +VFDA + +
Sbjct: 13 ILIVDGYNIINAWDDL-NELSKINLESSREKLIDYMIEFSKYMGYKTTIVFDAYNVKNSA 71
Query: 102 PTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
++ V+IVF E AD++IEK I L + V TSD+ +Q G GA
Sbjct: 72 GYEEKRSDSVEIVFTKEHQTADSYIEKYIAELPNKEFIDLKVATSDYAEQQIVLGKGAAR 131
Query: 161 WSSKALVSEV 170
S++ L +V
Sbjct: 132 ISARELQLDV 141
>gi|288554707|ref|YP_003426642.1| putative RNAse [Bacillus pseudofirmus OF4]
gi|288545867|gb|ADC49750.1| putative RNAse with PIN and NYM domains [Bacillus pseudofirmus OF4]
Length = 170
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALM-SGL 101
+LLVDGYN+ G WP+L +K R L +AR +L+E + E+ +V V+FDA M +G+
Sbjct: 4 ILLVDGYNMIGAWPEL--RALKDRDLALARDRLVERMAEYQAFTGYEVKVIFDAHMVAGI 61
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ VD+++ E AD IE+ ++ L++ ++ V TSD +Q +G+GA
Sbjct: 62 GKQYLNY-RVDVIYTKENETADERIERLVLDLKQIDT-RIHVATSDFTEQSLIFGSGALR 119
Query: 161 WSSKALVSEVSL 172
S++ L+ E+ +
Sbjct: 120 KSARELLIELEV 131
>gi|374581257|ref|ZP_09654351.1| small GTP-binding protein domain protein [Desulfosporosinus
youngiae DSM 17734]
gi|374417339|gb|EHQ89774.1| small GTP-binding protein domain protein [Desulfosporosinus
youngiae DSM 17734]
Length = 883
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L+ +D AR KL++ L + IR+ +V+VVFDA + H
Sbjct: 715 LLVDGYNIIHAWPELK-ELADENMDGARMKLLDTLSNYQGIRKCRVIVVFDAYR--VQGH 771
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGA 158
EE I + +VF E AD +IEK D K + V TSD LQQ GAG+
Sbjct: 772 VEEVIDYHNIHMVFTREAQTADQYIEK----FAHDNQKKYNITVATSDGLQQLIIRGAGS 827
Query: 159 FVWSSKALVSEV 170
+ S++ L E+
Sbjct: 828 ALLSARDLKIEI 839
>gi|220928484|ref|YP_002505393.1| small GTP-binding protein [Clostridium cellulolyticum H10]
gi|219998812|gb|ACL75413.1| small GTP-binding protein [Clostridium cellulolyticum H10]
Length = 880
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L+ + AR KL++ L + IR+ +++VVFDA + H
Sbjct: 711 LLVDGYNILFAWPELKE-LADKNAEAARMKLLDSLSNYQGIRQSRIIVVFDAYR--VQGH 767
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGA 158
+EE I + +V+ E AD +IEK D K + V TSD LQQ GAG
Sbjct: 768 REEIIDYHNIHVVYTKEAQTADQYIEK----FAHDNQKKYNITVATSDGLQQIIVRGAGC 823
Query: 159 FVWSSKALVSEV 170
+ S++ L EV
Sbjct: 824 ALLSARELKIEV 835
>gi|452972578|gb|EME72407.1| hypothetical protein BSONL12_21899 [Bacillus sonorensis L12]
Length = 170
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G WP+L++ + AR LI+++ E+ +V+VVFDA L+ G
Sbjct: 1 MDILLVDGYNMIGAWPQLKD-LKANSFEEARDLLIQKMAEYQSYTGYRVIVVFDAHLVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + V+++F E AD IEK + + + ++ V TSD+ +Q A +G GA
Sbjct: 60 IEKKRINH-RVEVIFTKENETADERIEK-LASDLNNIQTQIHVATSDYTEQWAIFGQGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L+ EV I
Sbjct: 118 RKSARELLREVEAI 131
>gi|167629449|ref|YP_001679948.1| hypothetical protein HM1_1360 [Heliobacterium modesticaldum Ice1]
gi|167592189|gb|ABZ83937.1| duf901 protein [Heliobacterium modesticaldum Ice1]
Length = 173
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
L+VDGYN WP L++ ++ R D AR KLI+ L+E++ ++ +++++VFDA + G
Sbjct: 3 DTLIVDGYNALNAWPDLQD--LRARSFDHARDKLIDILIEYAALQGLQLIIVFDAHHVKG 60
Query: 101 LPTHKEEFIGVDIVFPG-ETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
EE G IV+ E AD +IE+ ++ + G VWV T D ++Q A G GA
Sbjct: 61 GKERVEERAGARIVYTREEETADRYIER-LLGRQVRG--NVWVATGDAVEQAIALGRGAC 117
Query: 160 VWSSKALVSEV 170
S + L ++V
Sbjct: 118 RLSVRELHAQV 128
>gi|332710756|ref|ZP_08430696.1| putative PIN domain RNA-binding protein [Moorea producens 3L]
gi|332350480|gb|EGJ30080.1| putative PIN domain RNA-binding protein [Moorea producens 3L]
Length = 182
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +LLVDGYNV G W L+N + L +RQ+LIE L +S +VFDA
Sbjct: 7 LAILLVDGYNVIGSWSFLKNTRDRDGLLSSRQELIETLANYSAFVGYDTEIVFDAHSLNT 66
Query: 102 PTHKEEFIGVDIVFP---GETCADAWIEKEIVALRED---GCPKVWVVTSDHLQQHAAYG 155
P +E V+ GET AD +IEK + R + ++ V TSD QQ G
Sbjct: 67 PNSREVITNNLSVYYTDFGET-ADTYIEKFCASYRTNLVQPTKRLIVATSDRAQQLTVVG 125
Query: 156 AGAFVWSSKALVSEV 170
GA S + L+S+V
Sbjct: 126 YGAQCMSCQQLLSDV 140
>gi|443320896|ref|ZP_21049970.1| putative RNA-binding protein containing a PIN domain [Gloeocapsa
sp. PCC 73106]
gi|442789401|gb|ELR99060.1| putative RNA-binding protein containing a PIN domain [Gloeocapsa
sp. PCC 73106]
Length = 184
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 37 GIDNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA 96
+ +A +LLVDGYN+ G W KL+ + L+ AR+ LI +++++ + K +VFD+
Sbjct: 2 SVSSAQALLLVDGYNIIGAWEKLQKIRDRDGLEFARRDLISLVIDYTAYQGFKTEIVFDS 61
Query: 97 LMSGLPTHKEEF---IGVDIVFPGETCADAWIEKEIVAL---REDGCPKVWVVTSDHLQQ 150
P KEE+ + V +T AD +IE+ A + ++ V TSD Q+
Sbjct: 62 HFQKTPNQKEEYSPTVSVHYTAFAQT-ADTYIERVCAAFSRSHQSVARRLIVATSDRAQR 120
Query: 151 HAAYGAGAFVWSSKALVSEV 170
A G GA +S++ E+
Sbjct: 121 LTAIGYGAECFSAEKFQKEI 140
>gi|313887562|ref|ZP_07821245.1| conserved hypothetical protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846440|gb|EFR33818.1| conserved hypothetical protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 181
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 42 VPVLLVDGYNVCGYW-PKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM-- 98
V L VDGYN+ W P +E + L+ AR +LI+ ++EFS R +++VFDA +
Sbjct: 12 VNYLFVDGYNIINSWQPLIELKNVS--LEDARNELIDIMIEFSHTRREHIILVFDAYLVK 69
Query: 99 -SGLPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDG-CPKVWVVTSDHLQQHAAYG 155
SG T+K++ G+D++F E AD +IE++ L E G V V TSD+++Q
Sbjct: 70 KSGGKTYKKD--GIDVIFTKEFETADHYIERQ---LDEIGRLTNVRVATSDNVEQQIILS 124
Query: 156 AGAFVWSSKALVSEVS 171
G S++ L +EV+
Sbjct: 125 RGGTRISARELEAEVN 140
>gi|227510712|ref|ZP_03940761.1| protein of hypothetical function DUF901 [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227513727|ref|ZP_03943776.1| YacP family protein [Lactobacillus buchneri ATCC 11577]
gi|227522456|ref|ZP_03952505.1| protein of hypothetical function DUF901 [Lactobacillus hilgardii
ATCC 8290]
gi|227083046|gb|EEI18358.1| YacP family protein [Lactobacillus buchneri ATCC 11577]
gi|227090408|gb|EEI25720.1| protein of hypothetical function DUF901 [Lactobacillus hilgardii
ATCC 8290]
gi|227189833|gb|EEI69900.1| protein of hypothetical function DUF901 [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 178
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP L RL AR +L+ EL E+ R++ ++VVFDA+ +P
Sbjct: 5 LLIVDAYNMIGNWPHLNKLKQADRLADARDQLLAELSEYKKYRDINMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ + F D+ + AD++IE + +++ +V V TSD +Q + AGA
Sbjct: 63 NSKSFRKFDMEIVWTSKDQTADSYIE-ALSRKKQNRFTQVIVATSDQAEQWTIFAAGALR 121
Query: 161 WSSKALVSEVS 171
++ L+ +V
Sbjct: 122 IPARELLRDVQ 132
>gi|333896170|ref|YP_004470044.1| hypothetical protein Thexy_0316 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111435|gb|AEF16372.1| protein of unknown function DUF901 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 164
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS-GLPT 103
+++DGYNV W L+ + L+ ARQKLI+ L F +++VFDA+ + G
Sbjct: 3 MVIDGYNVINNWQDLKLE-ARNNLEDARQKLIDILQNFRGYTGFNIILVFDAMYAKGKQQ 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIE---KEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+KE G+++V+ E AD++IE KEI+ KV VVTSD + Q G GA
Sbjct: 62 NKEYHNGIEVVYTKEGESADSYIEGLIKEIIK-----KDKVVVVTSDWILQQVVLGQGAI 116
Query: 160 VWSSKALVSEVS 171
SS+ L E++
Sbjct: 117 RMSSRELYEELN 128
>gi|418577083|ref|ZP_13141213.1| hypothetical protein SSME_22690 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379324445|gb|EHY91593.1| hypothetical protein SSME_22690 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 173
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G +L + + L+ AR++L+ + ++ + +VV VFDA +
Sbjct: 6 LIIDGYNMIGQSQEL-SRIAQDNLEEAREQLLIAIANYNAVIADEVVCVFDAYEQSGAST 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +GAGA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSYIERYVYDLYDKHTRHITVVTSDMSEQHAIFGAGAYRVSS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|317057543|ref|YP_004106010.1| small GTP-binding protein [Ruminococcus albus 7]
gi|315449812|gb|ADU23376.1| small GTP-binding protein [Ruminococcus albus 7]
Length = 858
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ W L+ + LD+AR LI L F R ++++VFDA P H
Sbjct: 715 LLVDGYNIIFAWDDLKKQAAES-LDLARSTLINRLSSFQGCRGCEMIIVFDAYRVKEPEH 773
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
++ V +V+ E AD +IE+ L +D +V V TSD L+Q G+GA S+
Sbjct: 774 IDKAGSVSVVYTKEAETADTYIERTAHQLAKD--HRVTVATSDGLEQVIIMGSGARRMSA 831
Query: 164 KALVSEV 170
L EV
Sbjct: 832 SDLKHEV 838
>gi|138893767|ref|YP_001124220.1| hypothetical protein GTNG_0088 [Geobacillus thermodenitrificans
NG80-2]
gi|196251122|ref|ZP_03149801.1| protein of unknown function DUF901 [Geobacillus sp. G11MC16]
gi|134265280|gb|ABO65475.1| Hypothetical cytosolic protein [Geobacillus thermodenitrificans
NG80-2]
gi|196209363|gb|EDY04143.1| protein of unknown function DUF901 [Geobacillus sp. G11MC16]
Length = 170
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYN+ G WP L +G L AR LI+++ ++ V++VFDA +
Sbjct: 3 ILIVDGYNIIGAWPVLRQLKEEGDLAAARDLLIDKMADYKGFTGDHVMIVFDAHLVPGNE 62
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
K + VD++F E AD IE+ L + KV+V TSD+ +Q + GA S
Sbjct: 63 KKYKNYDVDVIFTKENETADERIERLAKTLM-NARTKVYVATSDYTEQWTVFSQGALRKS 121
Query: 163 SKALVSEVSLI 173
++ L+ E+ +
Sbjct: 122 ARELLYEIEAV 132
>gi|359410053|ref|ZP_09202518.1| protein of unknown function DUF901 [Clostridium sp. DL-VIII]
gi|357168937|gb|EHI97111.1| protein of unknown function DUF901 [Clostridium sp. DL-VIII]
Length = 170
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ + VDGYNV WP L+ + + ARQ LI++L + + + ++VVFDA
Sbjct: 1 MKTIFVDGYNVINSWPDLKRN-KDSSFEGARQTLIDKLHNYGVFKACNIIVVFDAHKVAG 59
Query: 102 PTHKEEFIG--VDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
K+E + V +VF GET AD++IEK++ AL ++ VVTSD+L+Q + G
Sbjct: 60 SLEKKEEVNKHVSVVFTKDGET-ADSYIEKKVNALGRK--YEIVVVTSDNLEQQTVFQRG 116
Query: 158 AFVWSSKALVSEV 170
A SS +E+
Sbjct: 117 AVRMSSIEFYNEI 129
>gi|345862639|ref|ZP_08814856.1| small GTP-binding domain protein [Desulfosporosinus sp. OT]
gi|344324294|gb|EGW35855.1| small GTP-binding domain protein [Desulfosporosinus sp. OT]
Length = 883
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 22 TELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVE 81
T L R++ + + + LLVDGYN+ WP+L+ +D AR KL++ L
Sbjct: 692 TALERYYEPVTYVGRQKETKEEYLLVDGYNIIYAWPELK-ELADDNMDSARMKLLDTLSN 750
Query: 82 FSMIREVKVVVVFDA-LMSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPK 139
+ I++ +++VVFDA L+ G ++ + +V+ E AD +IEK D K
Sbjct: 751 YQGIQKCQIIVVFDAYLVQGRLEEIIDYHNIHMVYTKEAQTADQYIEK----FAHDNQKK 806
Query: 140 --VWVVTSDHLQQHAAYGAGAFVWSSKALVSEVS 171
+ V TSD LQQ GAG + S++ L SE+
Sbjct: 807 YNIVVATSDGLQQIIIRGAGCALLSARELKSEIQ 840
>gi|313884751|ref|ZP_07818506.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620012|gb|EFR31446.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
Length = 178
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L VDGYN+ G WP+L + + AR L+ EL FS R++ ++VVFDA + G+
Sbjct: 6 ILFVDGYNMIGAWPELSHLQRHDEIQAARDLLLFELSGFSKYRDLDIIVVFDAQFVPGIT 65
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+E+ + +VF E AD++IE+E+ + +V V TSD +Q + GA
Sbjct: 66 KSYQEY-DLTVVFTQEGETADSYIEREVQNYL-NALTRVVVATSDAAEQWMIFQQGALRQ 123
Query: 162 SSKALVSEV 170
S+K L ++
Sbjct: 124 SAKELQMDI 132
>gi|125972557|ref|YP_001036467.1| small GTP-binding protein [Clostridium thermocellum ATCC 27405]
gi|125712782|gb|ABN51274.1| small GTP-binding protein [Clostridium thermocellum ATCC 27405]
Length = 888
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L+ LD AR KL++ L + IR V+VVFDA + H
Sbjct: 713 LLVDGYNIIYAWPELKK-LADENLDGARMKLLDMLSNYQWIRRCHVIVVFDAYR--VEGH 769
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
KEE I + +V+ E AD +IEK A + V TSD LQQ G G +
Sbjct: 770 KEEIIDYYNIHVVYTREAQTADQYIEK--FAYENSKNYDITVATSDGLQQIIVRGEGCAL 827
Query: 161 WSSKALVSEV 170
S++ L +E+
Sbjct: 828 LSARELKAEL 837
>gi|256005611|ref|ZP_05430570.1| small GTP-binding protein [Clostridium thermocellum DSM 2360]
gi|385779527|ref|YP_005688692.1| small GTP-binding protein [Clostridium thermocellum DSM 1313]
gi|419722305|ref|ZP_14249451.1| small GTP-binding protein [Clostridium thermocellum AD2]
gi|419725673|ref|ZP_14252711.1| small GTP-binding protein [Clostridium thermocellum YS]
gi|255990446|gb|EEU00569.1| small GTP-binding protein [Clostridium thermocellum DSM 2360]
gi|316941207|gb|ADU75241.1| small GTP-binding protein [Clostridium thermocellum DSM 1313]
gi|380770909|gb|EIC04791.1| small GTP-binding protein [Clostridium thermocellum YS]
gi|380781652|gb|EIC11304.1| small GTP-binding protein [Clostridium thermocellum AD2]
Length = 888
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L+ LD AR KL++ L + IR V+VVFDA + H
Sbjct: 713 LLVDGYNIIYAWPELKK-LADENLDGARMKLLDMLSNYQWIRRCHVIVVFDAYR--VEGH 769
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
KEE I + +V+ E AD +IEK A + V TSD LQQ G G +
Sbjct: 770 KEEIIDYYNIHVVYTREAQTADQYIEK--FAYENSKNYDITVATSDGLQQIIVRGEGCAL 827
Query: 161 WSSKALVSEV 170
S++ L +E+
Sbjct: 828 LSARELKAEL 837
>gi|315925067|ref|ZP_07921284.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621966|gb|EFV01930.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
23263]
Length = 180
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 14/140 (10%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVA--RQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
L+VDGYNV +LE + D+A R+ LI L +S + + V+VFDA P
Sbjct: 5 LIVDGYNVIYQHAELEKRAV---FDLADEREDLIHRLANYSGFKGCETVLVFDAYAREDP 61
Query: 103 -THKEEFIGVDIVFPG-ETCADAWIEKEIVALREDGCPK-------VWVVTSDHLQQHAA 153
T +E+ +G+ +VF G + ADA+IE+ +V L D K V VVTSD Q
Sbjct: 62 KTREEKRLGITVVFTGRDITADAYIERRVVELLGDTPEKRRRSRRLVEVVTSDGAVQQMV 121
Query: 154 YGAGAFVWSSKALVSEVSLI 173
G+GA SS+ LV + I
Sbjct: 122 LGSGAVRISSRELVRAMGEI 141
>gi|326791063|ref|YP_004308884.1| small GTP-binding protein [Clostridium lentocellum DSM 5427]
gi|326541827|gb|ADZ83686.1| small GTP-binding protein [Clostridium lentocellum DSM 5427]
Length = 879
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 6 TSYRRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLENHFIK 65
++++++K +E Y+ Y N NQ D LLVDGYN+ WP+L+
Sbjct: 686 SAWKKRKTARESY------YKPVGYTMNQNQ--DKKEEYLLVDGYNIIFAWPELKE-LAN 736
Query: 66 GRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPTHKEEFIGVDIVFPGET-CADA 123
+D AR KL+E L + IR+ +++VVFDA + G E+ + +V+ E AD
Sbjct: 737 ENMDGARIKLLESLCNYQGIRKCQIIVVFDAYRVQGHRVEMIEYHNIYMVYTKEAQTADH 796
Query: 124 WIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
+IEK + D K V V TSD L+Q G G + S++ L E+
Sbjct: 797 YIEKFV----HDHKTKYHVTVATSDGLEQIIIRGQGCALLSARELKEEI 841
>gi|386727439|ref|YP_006193765.1| hypothetical protein B2K_35755 [Paenibacillus mucilaginosus K02]
gi|384094564|gb|AFH66000.1| hypothetical protein B2K_35755 [Paenibacillus mucilaginosus K02]
Length = 171
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 25/139 (17%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA------- 96
+L+VDGYN+ G WP L+ + RL+ AR +LIE + E+ +KV+VVFDA
Sbjct: 5 ILIVDGYNIIGAWPHLQ-QLKEIRLEEARDRLIEIMAEYQSFSGMKVIVVFDAYYVPGLG 63
Query: 97 ---LMSGLPTH--KEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQH 151
L S LP + KE + AD IE+ +V +V+V TSD +QH
Sbjct: 64 GKYLQSRLPVYYTKE-----------KETADELIER-LVTAHVGRRKQVYVATSDMTEQH 111
Query: 152 AAYGAGAFVWSSKALVSEV 170
+G GAF + L+ +V
Sbjct: 112 VIFGKGAFRIPASELLIKV 130
>gi|326200912|ref|ZP_08190784.1| small GTP-binding protein [Clostridium papyrosolvens DSM 2782]
gi|325988480|gb|EGD49304.1| small GTP-binding protein [Clostridium papyrosolvens DSM 2782]
Length = 882
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 13/128 (10%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L+ K D AR KL++ L + IR+ +++VVFDA + H
Sbjct: 714 LLVDGYNILFAWPELKELSDK-NTDAARMKLLDLLSNYQGIRQCRIIVVFDAYR--VQGH 770
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGA 158
+EE I + +V+ E AD +IEK D K + V TSD LQQ GAG
Sbjct: 771 REEIISYNNIHVVYTKEAQTADQYIEK----FAHDNQKKYNITVATSDGLQQIIVRGAGC 826
Query: 159 FVWSSKAL 166
+ S++ L
Sbjct: 827 ALLSAREL 834
>gi|186684658|ref|YP_001867854.1| hypothetical protein Npun_R4550 [Nostoc punctiforme PCC 73102]
gi|186467110|gb|ACC82911.1| protein of unknown function DUF901 [Nostoc punctiforme PCC 73102]
Length = 183
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
VLLVDGYN+ G WP L+ L+ AR +L+E + +S + +VFDA
Sbjct: 8 AVLLVDGYNIIGAWPCLKKTRDSVGLEAARGELVEAMTGYSAFQGYTTQIVFDAQYQNSS 67
Query: 103 THKE---EFIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYG 155
++KE E + V G+T AD +IEK + R + +V V TSD QQ G
Sbjct: 68 SNKEIITELLSVYYTDFGQT-ADTYIEKSCASFRHQIAQSLVSRVIVATSDRAQQLMIQG 126
Query: 156 AGAFVWSSKALVSEVSLII 174
GA S++ L EV +
Sbjct: 127 YGAEWLSAQQLCGEVEATV 145
>gi|332800098|ref|YP_004461597.1| hypothetical protein TepRe1_2168 [Tepidanaerobacter acetatoxydans
Re1]
gi|438003401|ref|YP_007273144.1| Hypothetical protein DUF901, similar to C-terminal domain of
ribosome protection-type Tc-resistance proteins
[Tepidanaerobacter acetatoxydans Re1]
gi|332697833|gb|AEE92290.1| protein of unknown function DUF901 [Tepidanaerobacter acetatoxydans
Re1]
gi|432180195|emb|CCP27168.1| Hypothetical protein DUF901, similar to C-terminal domain of
ribosome protection-type Tc-resistance proteins
[Tepidanaerobacter acetatoxydans Re1]
Length = 175
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L + K L AR KLI+ + ++S VV+VFDA
Sbjct: 9 LLVDGYNIINAWPELIDEAKKIDLGSARDKLIDIMADYSAFTGTFVVIVFDAHQVDKNRR 68
Query: 105 KEEFI-GVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
I GV++V+ GET AD +IEK + A+ KV V TSD ++Q G GA
Sbjct: 69 TSYTINGVEVVYTKEGET-ADHYIEKVVDAIGR--QEKVRVATSDWIEQQIVMGRGAHRI 125
Query: 162 SSKALVSEVSLI 173
S++ L EV+ I
Sbjct: 126 SARELYEEVNNI 137
>gi|254417552|ref|ZP_05031290.1| conserved hypothetical protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196175650|gb|EDX70676.1| conserved hypothetical protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 182
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
LLVDGYN+ G L + L ARQ+L+E L+ +S R K VVFDA T
Sbjct: 9 TLLVDGYNIIGTESSLTKMRDRHGLLAARQELVEVLINYSAFRGYKTKVVFDAHYQPTGT 68
Query: 104 HKEEFI-GVDIVFP--GETCADAWIEKEIVALREDGCPKVW-----VVTSDHLQQHAAYG 155
E+ V I + G+T AD++IEK A+R PK++ V TSD QQ G
Sbjct: 69 RHEDITPHVSICYTDFGQT-ADSYIEKFCAAVRSK--PKLFKQRLIVATSDRAQQLTVTG 125
Query: 156 AGAFVWSSKALVSEV 170
GA SS+ L+S+V
Sbjct: 126 YGAEWMSSQQLISDV 140
>gi|376262354|ref|YP_005149074.1| small GTP-binding protein domain-containing protein [Clostridium
sp. BNL1100]
gi|373946348|gb|AEY67269.1| small GTP-binding protein domain protein [Clostridium sp. BNL1100]
Length = 883
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L+ K +D AR KL++ L + IR+ +++VVFDA + H
Sbjct: 714 LLVDGYNILFAWPELKELSDKD-IDAARMKLLDLLSNYQGIRQCRIIVVFDAYR--VQGH 770
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGA 158
+EE + + +V+ E AD +IEK D K + V TSD LQQ GAG
Sbjct: 771 REEIVSYHNIHVVYTKEAQTADQYIEK----FAHDNQKKYNITVATSDGLQQIIVRGAGC 826
Query: 159 FVWSSKALVSEV 170
+ S++ L +V
Sbjct: 827 TLLSARELKIDV 838
>gi|337751743|ref|YP_004645905.1| hypothetical protein KNP414_07541 [Paenibacillus mucilaginosus
KNP414]
gi|379724687|ref|YP_005316818.1| hypothetical protein PM3016_7085 [Paenibacillus mucilaginosus 3016]
gi|336302932|gb|AEI46035.1| hypothetical protein KNP414_07541 [Paenibacillus mucilaginosus
KNP414]
gi|378573359|gb|AFC33669.1| hypothetical protein PM3016_7085 [Paenibacillus mucilaginosus 3016]
Length = 171
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 25/139 (17%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA------- 96
+L+VDGYN+ G WP L+ + RL+ AR +LIE + E+ +KV+VVFDA
Sbjct: 5 ILIVDGYNIIGAWPHLQ-QLKEIRLEEARDRLIEIMAEYQSFSGMKVIVVFDAYYVPGLG 63
Query: 97 ---LMSGLPTH--KEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQH 151
L S LP + KE + AD IE+ +V +V+V TSD +QH
Sbjct: 64 GKYLQSRLPVYYTKE-----------KETADELIER-LVTAHVGRRKQVYVATSDMTEQH 111
Query: 152 AAYGAGAFVWSSKALVSEV 170
+G GAF + L+ +V
Sbjct: 112 VIFGKGAFRIPASELLIKV 130
>gi|199598533|ref|ZP_03211950.1| PIN domain containing protein [Lactobacillus rhamnosus HN001]
gi|229552883|ref|ZP_04441608.1| tetracycline resistance protein [Lactobacillus rhamnosus LMS2-1]
gi|258509318|ref|YP_003172069.1| PIN domain/Zn-ribbon domain-containing protein [Lactobacillus
rhamnosus GG]
gi|258540507|ref|YP_003175006.1| PIN domain containing protein (Yacp-like protein) [Lactobacillus
rhamnosus Lc 705]
gi|385828954|ref|YP_005866726.1| hypothetical protein [Lactobacillus rhamnosus GG]
gi|418072171|ref|ZP_12709443.1| PIN domain containing protein (Yacp-like protein) [Lactobacillus
rhamnosus R0011]
gi|423080358|ref|ZP_17068982.1| hypothetical protein HMPREF0541_03008 [Lactobacillus rhamnosus ATCC
21052]
gi|199590575|gb|EDY98664.1| PIN domain containing protein [Lactobacillus rhamnosus HN001]
gi|229313752|gb|EEN79725.1| tetracycline resistance protein [Lactobacillus rhamnosus LMS2-1]
gi|257149245|emb|CAR88218.1| PIN domain containing protein (Yacp-like protein) [Lactobacillus
rhamnosus GG]
gi|257152183|emb|CAR91155.1| PIN domain containing protein (Yacp-like protein) [Lactobacillus
rhamnosus Lc 705]
gi|259650599|dbj|BAI42761.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
gi|357537422|gb|EHJ21446.1| PIN domain containing protein (Yacp-like protein) [Lactobacillus
rhamnosus R0011]
gi|357542700|gb|EHJ24737.1| hypothetical protein HMPREF0541_03008 [Lactobacillus rhamnosus ATCC
21052]
Length = 179
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+++VDGYNV G WP+L + DVAR +L++ L E+ K++VVFDA+ +P
Sbjct: 5 IMIVDGYNVIGNWPELAKLKAEDHFDVARDRLLDILAEYRSHENAKMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVD--IVFPGET-CADAWIEKEIVALREDGCPKVW--VVTSDHLQQHAAYGAGA 158
+ + D +VF E AD++IE+ +E P V VVTSD +Q + GA
Sbjct: 63 IGKSYAKWDLQVVFTKEDETADSYIER---LAQEMNSPLVQLVVVTSDQAEQWTVFSRGA 119
Query: 159 FVWSSKALVSEVS 171
SS+ + EV
Sbjct: 120 LRISSRDFLKEVQ 132
>gi|227533681|ref|ZP_03963730.1| PilT domain protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227188665|gb|EEI68732.1| PilT domain protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 179
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+++VDGYNV G WP+L + DVAR++L++ L E+ K++VVFDA+ +P
Sbjct: 5 IMIVDGYNVIGNWPELAKLKAEDHFDVARERLLDILAEYRSHENAKMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVD--IVFPGET-CADAWIEKEIVALRED-GCPKVW--VVTSDHLQQHAAYGAG 157
+ + D +VF E AD++IE+ L +D P V VVTSD +Q + G
Sbjct: 63 IGKSYAKWDLQVVFTKEDETADSYIER----LAQDMNSPLVQLVVVTSDQAEQWTVFSRG 118
Query: 158 AFVWSSKALVSEVS 171
A SS+ + EV
Sbjct: 119 ALRISSRDFLKEVQ 132
>gi|428774964|ref|YP_007166751.1| hypothetical protein PCC7418_0301 [Halothece sp. PCC 7418]
gi|428689243|gb|AFZ42537.1| protein of unknown function DUF901 [Halothece sp. PCC 7418]
Length = 178
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 41 AVPVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMS 99
A PVLLVDGYN+ G W +L++ ++ R L+ AR +L++ L+ ++ + VVFDA
Sbjct: 4 APPVLLVDGYNIIGAWSELKS--LRDRDLEAARDRLVDTLINYTASKGYHTQVVFDAHFQ 61
Query: 100 GLPTHKEE---FIGVDIVFPGETCADAWIEKEIVALREDG---CPKVWVVTSDHLQQHAA 153
P +E ++ V GET AD +IEK G ++ V TSD QQ
Sbjct: 62 TTPKFRETQTPYLSVYYTAYGET-ADTYIEKFCATNSRQGKVVQQRLIVATSDRAQQLTV 120
Query: 154 YGAGAFVWSSKALVSEV 170
G GA S++ L ++V
Sbjct: 121 SGYGAEWLSAQQLANDV 137
>gi|121535682|ref|ZP_01667486.1| protein of unknown function DUF901 [Thermosinus carboxydivorans
Nor1]
gi|121305713|gb|EAX46651.1| protein of unknown function DUF901 [Thermosinus carboxydivorans
Nor1]
Length = 172
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L+VDGYNV WP+L + L+ AR+KL+E L + + +V++VFDA ++G+ +
Sbjct: 5 LIVDGYNVINAWPELAA-LKEDSLEHAREKLLEILAGYGAYKGYRVIIVFDAHAVAGMES 63
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ +++V+ E AD++IEK + L G +V+VVTSD +Q GAGAF
Sbjct: 64 VEQITPDLEVVYTSEGQTADSYIEKMVYYLVRQG-HRVYVVTSDWAEQMVILGAGAFRIP 122
Query: 163 SKAL 166
++ L
Sbjct: 123 AREL 126
>gi|421773655|ref|ZP_16210295.1| PIN domain containing protein (Yacp-like protein) [Lactobacillus
rhamnosus LRHMDP3]
gi|411181559|gb|EKS48728.1| PIN domain containing protein (Yacp-like protein) [Lactobacillus
rhamnosus LRHMDP3]
Length = 179
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+++VDGYNV G WP+L + DVAR +L++ L E+ K++VVFDA+ +P
Sbjct: 5 IMIVDGYNVIGNWPELAKLKAEDHFDVARDRLLDILAEYRSHENAKMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVD--IVFPGET-CADAWIEKEIVALREDGCPKVW--VVTSDHLQQHAAYGAGA 158
+ + D +VF E AD++IE+ +E P V VVTSD +Q + GA
Sbjct: 63 IGKSYAKWDLQVVFTKEDETADSYIER---LAQEMNSPLVQLVVVTSDQAEQWTVFSRGA 119
Query: 159 FVWSSKALVSEVS 171
SS+ + EV
Sbjct: 120 LRISSRDFLKEVQ 132
>gi|357638326|ref|ZP_09136199.1| hypothetical protein STRUR_1904 [Streptococcus urinalis 2285-97]
gi|418417940|ref|ZP_12991132.1| hypothetical protein HMPREF9318_01880 [Streptococcus urinalis
FB127-CNA-2]
gi|357586780|gb|EHJ56188.1| hypothetical protein STRUR_1904 [Streptococcus urinalis 2285-97]
gi|410869470|gb|EKS17431.1| hypothetical protein HMPREF9318_01880 [Streptococcus urinalis
FB127-CNA-2]
Length = 171
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + + +F +LD AR+ L+ +L ++ + +V VFDA + G+
Sbjct: 5 ILLVDGYNMIAFWTETKQYFKTNKLDQAREILLRKLNHYAHFENIDIVCVFDAQYVPGVR 64
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E++ I + AD++IE+ + A +G V V TSD +Q + GA S
Sbjct: 65 QSYEQYKITTIFTEEDETADSYIER-LAADLNNGIHLVEVATSDLNEQWTVFSQGALRVS 123
Query: 163 SKALVSEVSLI 173
++ L V+ +
Sbjct: 124 ARELEKRVNTV 134
>gi|228475245|ref|ZP_04059970.1| conserved hypothetical protein [Staphylococcus hominis SK119]
gi|228270710|gb|EEK12119.1| conserved hypothetical protein [Staphylococcus hominis SK119]
Length = 176
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L++DGYN+ G +L + + L+ AR++L++ + ++ + ++V VFDA SG+
Sbjct: 6 LIIDGYNMIGQSREL-SKVARESLEEAREQLLDVIANYNAVVADEIVCVFDAYEQSGIE- 63
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
E+I GV VF E AD++IE+ + L + VVTSD +QHA +GAGA+
Sbjct: 64 --REYIYHGVKTVFTKEKETADSYIERYVYNLYNKHTTHITVVTSDMSEQHAIFGAGAYR 121
Query: 161 WSSKAL 166
SS+ +
Sbjct: 122 VSSREM 127
>gi|422305200|ref|ZP_16392495.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389789501|emb|CCI14483.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 181
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYNV G WP L+ + L+ AR KLIE L+ ++ + + +VFD+ P
Sbjct: 9 LLLVDGYNVIGAWPSLKKISDRHGLEPARDKLIETLIGYTHHQGYQTQIVFDSYFQDTPG 68
Query: 104 HKEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAGA 158
+E + + + F AD +IEK + P ++ V TSD+ Q+ G GA
Sbjct: 69 SQERYTNHLSVYFTAHAQTADTYIEKTCADFWYNRAPAIGRIIVATSDNAQKMTVMGYGA 128
Query: 159 FVWSSKALVSEVSL 172
S++ L EV L
Sbjct: 129 QWISAQRLEIEVDL 142
>gi|428206719|ref|YP_007091072.1| hypothetical protein Chro_1684 [Chroococcidiopsis thermalis PCC
7203]
gi|428008640|gb|AFY87203.1| protein of unknown function DUF901 [Chroococcidiopsis thermalis PCC
7203]
Length = 183
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS--- 99
PVLLVDGYN+ G W L+ + L+ AR +L E L+ +S + + +VFDA
Sbjct: 8 PVLLVDGYNIIGAWQHLKIARDRDGLEAARWQLAEALISYSAFKGLSTQIVFDAQYQQTI 67
Query: 100 GLPTHKEEFIGVDIVFPGETCADAWIEKEIVA-----LREDGCPKVWVVTSDHLQQHAAY 154
G K E + V GET AD +IE+ A L C ++ V TSD QQ
Sbjct: 68 GTQEVKTENLSVYYTNFGET-ADTYIERICAAYYRQYLNRSLCSRLIVATSDRAQQLTVM 126
Query: 155 GAGAFVWSSKALVSEV 170
G GA S+ L EV
Sbjct: 127 GYGAEWLSALQLRQEV 142
>gi|314937162|ref|ZP_07844509.1| conserved hypothetical protein [Staphylococcus hominis subsp.
hominis C80]
gi|418619640|ref|ZP_13182463.1| YacP-like NYN domain protein [Staphylococcus hominis VCU122]
gi|313655781|gb|EFS19526.1| conserved hypothetical protein [Staphylococcus hominis subsp.
hominis C80]
gi|374824206|gb|EHR88177.1| YacP-like NYN domain protein [Staphylococcus hominis VCU122]
Length = 176
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 8/126 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L++DGYN+ G +L + + L+ AR++L++ + ++ + ++V VFDA SG+
Sbjct: 6 LIIDGYNMIGQSREL-SKVARESLEEAREQLLDVIANYNAVVADEIVCVFDAYEQSGI-- 62
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ E+I GV VF E AD++IE+ + L + VVTSD +QHA +GAGA+
Sbjct: 63 -EREYIYHGVKTVFTKEKETADSYIERYVYNLYNKHTTHITVVTSDMSEQHAIFGAGAYR 121
Query: 161 WSSKAL 166
SS+ +
Sbjct: 122 VSSREM 127
>gi|374320665|ref|YP_005073794.1| hypothetical protein HPL003_03990 [Paenibacillus terrae HPL-003]
gi|357199674|gb|AET57571.1| hypothetical protein HPL003_03990 [Paenibacillus terrae HPL-003]
Length = 173
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL- 101
VLLVDGYN+ G WP+L + ++ + AR +L+E L + +V+VVFDA + GL
Sbjct: 7 VLLVDGYNMIGAWPEL-SALVQSGMQEARDRLLERLADHQAYSGRRVIVVFDAYRVPGLG 65
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
T+ + + + ET AD IE+ + L ++V TSD ++QH A+G GA
Sbjct: 66 KTYSQSKVQIYFTKEKET-ADECIERLVREL-SSRRRSIYVATSDQVEQHVAFGQGALRV 123
Query: 162 SSK 164
S++
Sbjct: 124 SAR 126
>gi|381208312|ref|ZP_09915383.1| hypothetical protein LGrbi_00065 [Lentibacillus sp. Grbi]
Length = 169
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ VL+VDGYN+ G W +L + + AR LIE+L E+ ++V++VFDA + G
Sbjct: 1 MNVLVVDGYNIIGDWEEL-RKLKQTSIGQARDMLIEKLAEYQAYTGMRVIIVFDAYYVKG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + +E+ V+I++ E AD IE+ IV ++ +V+V TSD+ +Q +G GA
Sbjct: 60 IASKLKEY-QVEIIYTKENETADECIER-IVKDLKNVINQVYVATSDYAEQRTIFGRGAL 117
Query: 160 VWSSKALVSEVSLI 173
S++ L E+ I
Sbjct: 118 RKSARELQIELDDI 131
>gi|375310824|ref|ZP_09776089.1| hypothetical protein WG8_4623 [Paenibacillus sp. Aloe-11]
gi|375077192|gb|EHS55435.1| hypothetical protein WG8_4623 [Paenibacillus sp. Aloe-11]
Length = 173
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP+L + ++ + AR +L+E L + +V+VVFDA +P
Sbjct: 7 VLLVDGYNMIGAWPEL-SALVQSGMQEARDRLLERLADHQAYSGRRVIVVFDAYR--VPG 63
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ F V I F E AD IE+ + L ++V TSD ++QH A+G GA
Sbjct: 64 LGKTFAQSKVQIYFTREKETADECIERLVREL-SSKRRSIYVATSDQVEQHVAFGQGALR 122
Query: 161 WSSK 164
S++
Sbjct: 123 VSAR 126
>gi|422866323|ref|ZP_16912948.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK1058]
gi|327488746|gb|EGF20545.1| protein of hypothetical function DUF901 [Streptococcus sanguinis
SK1058]
Length = 173
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + +F +G LD AR L+++ ++ ++V+ VFDA M G+
Sbjct: 5 ILLVDGYNMTAFWRETRPYFNRGELDAARTILLQKFSNYASFEGLEVICVFDAQYMPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
EEF V +VF E AD +IE+ + A +V V TSD +Q + GA
Sbjct: 65 QTYEEF-NVTVVFTEEEETADDYIER-LAAELNTPQNQVSVATSDLNEQWTVFAQGALRV 122
Query: 162 SSKALVSEVSL 172
S++ L V +
Sbjct: 123 SARELEKRVDV 133
>gi|392425992|ref|YP_006466986.1| small GTP-binding protein domain protein [Desulfosporosinus
acidiphilus SJ4]
gi|391355955|gb|AFM41654.1| small GTP-binding protein domain protein [Desulfosporosinus
acidiphilus SJ4]
Length = 886
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP L+ +D AR KL+E L + IR+ +++ VFDA + + H
Sbjct: 716 LLVDGYNIIYAWPGLKE-LADVNMDGARMKLLEILSNYQGIRKCQIITVFDAYL--VLGH 772
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
EE I + +VF E AD +IEK A + V TSD LQQ G+G +
Sbjct: 773 SEEVIDYHNIHLVFTKEAQTADQYIEK--FAYDHQKQYNITVATSDGLQQIIIRGSGGAL 830
Query: 161 WSSKALVSEVSL 172
S++ L E+ L
Sbjct: 831 LSARELKIEIDL 842
>gi|310644223|ref|YP_003948982.1| hypothetical protein [Paenibacillus polymyxa SC2]
gi|309249174|gb|ADO58741.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
gi|392304916|emb|CCI71279.1| putative protein yacP [Paenibacillus polymyxa M1]
Length = 173
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP+L + ++ + AR +L+E L + +V+VVFDA +P
Sbjct: 7 VLLVDGYNMIGAWPEL-SALVQSGMQEARDRLLERLADHQAYSGRRVIVVFDAYR--VPG 63
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ F V I F E AD IE+ + L ++V TSD ++QH A+G GA
Sbjct: 64 LGKTFAQSKVQIYFTREKETADECIERLVREL-SSKRRSIYVATSDQVEQHVAFGQGALR 122
Query: 161 WSSK 164
S++
Sbjct: 123 VSAR 126
>gi|384549397|ref|YP_005738649.1| hypothetical protein SAA6159_00486 [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302332246|gb|ADL22439.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 174
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G L + K L+ AR +LI+ + ++ + +++ VFDA
Sbjct: 6 LIIDGYNMIGQSQTL-SAIAKENLEEARMQLIDAIANYNAVISDEIICVFDAYDQSGVER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|307243387|ref|ZP_07525544.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
17678]
gi|306493197|gb|EFM65193.1| conserved hypothetical protein [Peptostreptococcus stomatis DSM
17678]
Length = 180
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L+VDGYN+ WP+L+ L++AR+ L+ + E+S I++ + VVFDA + G
Sbjct: 12 LVVDGYNIINAWPRLK-RVSDEDLELAREMLVAIIHEYSKIKDYEAHVVFDAYKVKGKEE 70
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E+ GV IV+ E AD +IEK I L + +V+V TSD+ +Q G G
Sbjct: 71 KYEDHHGVTIVYTKENQTADTYIEKFISGLSK--YDQVYVATSDYAEQQIVLGKGCSRVP 128
Query: 163 SKALVSEV 170
++ L+ E+
Sbjct: 129 ARELIEEL 136
>gi|373859612|ref|ZP_09602338.1| protein of unknown function DUF901 [Bacillus sp. 1NLA3E]
gi|372450607|gb|EHP24092.1| protein of unknown function DUF901 [Bacillus sp. 1NLA3E]
Length = 170
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 41 AVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMS 99
+ +L+VDGYN+ G WP+L K L AR L+E++ E+ +V+VVFDA +
Sbjct: 2 TMDILIVDGYNIIGAWPEL-IALKKKDLGAARDSLVEKMAEYQAYTGFQVIVVFDAHYVQ 60
Query: 100 GLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
G+ + V+++F E AD IEK +L + ++ V TSD +Q +G GA
Sbjct: 61 GIEKKYNNY-KVEVIFTKENESADERIEKLASSL-NNRRTQIHVATSDLTEQWVIFGQGA 118
Query: 159 FVWSSKALVSEVSLI 173
S++ L++E++ I
Sbjct: 119 LRKSARELLNEMTTI 133
>gi|223043035|ref|ZP_03613083.1| YacP [Staphylococcus capitis SK14]
gi|314932756|ref|ZP_07840125.1| conserved hypothetical protein [Staphylococcus caprae C87]
gi|417907422|ref|ZP_12551195.1| hypothetical protein SEVCU116_2413 [Staphylococcus capitis VCU116]
gi|222443889|gb|EEE49986.1| YacP [Staphylococcus capitis SK14]
gi|313654437|gb|EFS18190.1| conserved hypothetical protein [Staphylococcus caprae C87]
gi|341596315|gb|EGS38931.1| hypothetical protein SEVCU116_2413 [Staphylococcus capitis VCU116]
Length = 175
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G L + K L+ AR++L++ + ++ + ++V VFDA
Sbjct: 6 LIIDGYNMIGQSSAL-SAIAKESLEEAREQLLDAIANYNALIADEIVCVFDAYEQSGIER 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV VF E AD++IE+ + L + + VVTSD +QHA +G+GA+ SS
Sbjct: 65 EYVYHGVRTVFTKEKETADSFIERYVYELYDKHTTHITVVTSDMSEQHAIFGSGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|147676635|ref|YP_001210850.1| RNA binding protein [Pelotomaculum thermopropionicum SI]
gi|146272732|dbj|BAF58481.1| predicted RNA binding protein [Pelotomaculum thermopropionicum SI]
Length = 170
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L+VDGYN+ WP+ E RL+ AR KL+ L +S + K+ VVFDA
Sbjct: 5 LVVDGYNIIHAWPEFEK-LRDARLEHARSKLVSVLANYSPLSGQKIFVVFDAHQVKNYAE 63
Query: 105 KEEFI-GVDIVF--PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K E + G+ +++ GET ADA+IE+ + L ++G V+V TSD +Q +G GA+
Sbjct: 64 KTEIVDGIAVIYTRQGET-ADAFIERLVGDLLKEGP--VYVATSDWAEQSVVFGRGAYRL 120
Query: 162 SSKALVSEVS 171
+ + L +V+
Sbjct: 121 TPEELRRQVN 130
>gi|150015026|ref|YP_001307280.1| hypothetical protein Cbei_0134 [Clostridium beijerinckii NCIMB
8052]
gi|149901491|gb|ABR32324.1| protein of unknown function DUF901 [Clostridium beijerinckii NCIMB
8052]
Length = 170
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ + VDGYNV WP L+ + ARQ LI+ L + + ++++VFDA ++G
Sbjct: 1 MKTIFVDGYNVINSWPNLKQKK-DSSFEGARQTLIDTLHNYGVFNACRIILVFDAHKVTG 59
Query: 101 LPTHKEEF-IGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
KEE + +VF GET AD++IEK++ AL ++ VVTSD L+Q + G
Sbjct: 60 SIEKKEEVNRNISVVFTKDGET-ADSYIEKQVNALGRK--HEIVVVTSDSLEQQTIFQRG 116
Query: 158 AFVWSSKALVSEV 170
A SS +EV
Sbjct: 117 AVRMSSLEFYNEV 129
>gi|15612677|ref|NP_240980.1| hypothetical protein BH0114 [Bacillus halodurans C-125]
gi|10172726|dbj|BAB03833.1| BH0114 [Bacillus halodurans C-125]
Length = 170
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 11/134 (8%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G WP+L+ +K R L +AR KLI+ L E+ KV++VFDA M +P
Sbjct: 4 ILIVDGYNMIGAWPELKE--LKDRDLALARDKLIDRLAEYQAYTGCKVILVFDAHM--VP 59
Query: 103 ----THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
T+ I V ET AD IE+ + L+ +++V TSD +Q +G+GA
Sbjct: 60 GVGRTYNNHRIEVIYTRKNET-ADERIERLVRELKRIDT-QIYVATSDLAEQSHIFGSGA 117
Query: 159 FVWSSKALVSEVSL 172
S++ L +E+ +
Sbjct: 118 LRKSARELYNEMEV 131
>gi|385836145|ref|YP_005873920.1| yacP-like NYN domain protein [Lactobacillus rhamnosus ATCC 8530]
gi|355395637|gb|AER65067.1| yacP-like NYN domain protein [Lactobacillus rhamnosus ATCC 8530]
Length = 179
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+++VDGYNV G WP+L + DVAR +L++ L E+ K++VVFDA+ +P
Sbjct: 5 IMIVDGYNVIGNWPELAKLKAEDHFDVARDRLLDILAEYRSHENAKMIVVFDAVY--VPG 62
Query: 104 HKEEFIGVD--IVFPGET-CADAWIEKEIVALREDGCPKVW--VVTSDHLQQHAAYGAGA 158
+ + D +VF E AD++IE+ +E P V VVTSD +Q + GA
Sbjct: 63 IGKSYAKWDLQVVFTKEDETADSYIER---LAQEMNSPLVQLVVVTSDQAEQWTVFSRGA 119
Query: 159 FVWSSKALVSEVS 171
SS+ + EV
Sbjct: 120 LRISSRDFLKEVQ 132
>gi|255523095|ref|ZP_05390067.1| small GTP-binding protein [Clostridium carboxidivorans P7]
gi|255513210|gb|EET89478.1| small GTP-binding protein [Clostridium carboxidivorans P7]
Length = 887
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L K +D AR KL++ L + I+E K++VVFDA + G
Sbjct: 724 LLVDGYNIVFAWEGLR-EIAKDNIDAARTKLLDILCNYQAIKENKIIVVFDAYRVQGHQV 782
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IEK + G + V TSD+L+Q G GA + S
Sbjct: 783 EIYDYNNIHVVYTKEAETADQYIEK--FVHQNHGNYSITVATSDNLEQIIIRGNGAALLS 840
Query: 163 SKALVSEV 170
+ L+ E+
Sbjct: 841 AMELMGEI 848
>gi|384245037|gb|EIE18533.1| hypothetical protein COCSUDRAFT_68251 [Coccomyxa subellipsoidea
C-169]
Length = 360
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 36 QGIDNAVPVLLVDGYNVCGYWPKLE--NHFIKGRLDVARQKLIEELVEFSMIREVKVVVV 93
+ +D PVLLVDGYNV +E ++ L AR++L+ + +++++ + VVV
Sbjct: 154 KAVDKQPPVLLVDGYNVLLKRADMEAEQYWEAQTLADARERLVNDTRDYALVTGCRAVVV 213
Query: 94 FDALMS--GLPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDH 147
FDA + L T +E GV++V+P + AD +I E R +G P+V VV++D
Sbjct: 214 FDAFNNPETLITTREMVAGVEVVYPKGSDADMYIMAEAKLARTEGAPRVVVVSNDR 269
>gi|257866304|ref|ZP_05645957.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257873180|ref|ZP_05652833.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257800262|gb|EEV29290.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257807344|gb|EEV36166.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
Length = 172
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
P+L+VDGYN+ G WP+L + RL+ AR+ L+ L ++ +K++VVFDA +
Sbjct: 3 TPLLIVDGYNMIGAWPELVLLKNQDRLEDAREALLNRLSNYAKYEGLKIIVVFDAQLVPG 62
Query: 102 PTHKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
T ++++F GET AD++IE+ I + +V V TSD +Q + GA
Sbjct: 63 VTQSYTKYQLEVIFTEEGET-ADSYIER-IAGELNNRLTQVTVATSDLAEQWVIFSQGAL 120
Query: 160 VWSSKALVSEV 170
S++ L V
Sbjct: 121 RTSARELYKSV 131
>gi|392959720|ref|ZP_10325201.1| protein of unknown function DUF901 [Pelosinus fermentans DSM 17108]
gi|421056351|ref|ZP_15519269.1| protein of unknown function DUF901 [Pelosinus fermentans B4]
gi|421062066|ref|ZP_15524279.1| protein of unknown function DUF901 [Pelosinus fermentans B3]
gi|421064340|ref|ZP_15526224.1| protein of unknown function DUF901 [Pelosinus fermentans A12]
gi|421070074|ref|ZP_15531211.1| protein of unknown function DUF901 [Pelosinus fermentans A11]
gi|392438189|gb|EIW16047.1| protein of unknown function DUF901 [Pelosinus fermentans B4]
gi|392444786|gb|EIW22185.1| protein of unknown function DUF901 [Pelosinus fermentans B3]
gi|392448812|gb|EIW25989.1| protein of unknown function DUF901 [Pelosinus fermentans A11]
gi|392456104|gb|EIW32863.1| protein of unknown function DUF901 [Pelosinus fermentans DSM 17108]
gi|392461285|gb|EIW37499.1| protein of unknown function DUF901 [Pelosinus fermentans A12]
Length = 171
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 15/134 (11%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYNV WP+L K L+ AR KLI+ + + +++ V ++FDA +SG
Sbjct: 4 ILLVDGYNVIHAWPELSAR--KDNLEDARDKLIDMMASYGAFQDLAVTIIFDANAVSGAA 61
Query: 103 THKEEFIG-VDIVFP--GETCADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGA 156
E IG V +++ GET AD+ IE+ ++V R+ V+VVTSD ++Q GA
Sbjct: 62 VF-ENLIGHVSVIYTQEGET-ADSHIERMAYDMVRQRK----LVYVVTSDWVEQMVILGA 115
Query: 157 GAFVWSSKALVSEV 170
GA+ S++ L+ +V
Sbjct: 116 GAYRISARELLQDV 129
>gi|417981524|ref|ZP_12622189.1| uncharacterized DUF901 family protein [Lactobacillus casei 12A]
gi|417984343|ref|ZP_12624966.1| uncharacterized DUF901 family protein [Lactobacillus casei 21/1]
gi|410521663|gb|EKP96621.1| uncharacterized DUF901 family protein [Lactobacillus casei 12A]
gi|410525709|gb|EKQ00607.1| uncharacterized DUF901 family protein [Lactobacillus casei 21/1]
Length = 179
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+++VDGYNV G WP+L + DVAR +L++ L E+ K++VVFDA+ +P
Sbjct: 5 IMIVDGYNVIGNWPELAKLKAEDHFDVARDRLLDILAEYRSHENAKMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVD--IVFPGET-CADAWIEKEIVALRED-GCP--KVWVVTSDHLQQHAAYGAG 157
+ + D +VF E AD++IE+ L +D P ++ VVTSD +Q + G
Sbjct: 63 IGKSYAKWDLQVVFTKEDETADSYIER----LAQDMNSPLMQLVVVTSDQAEQWTVFSRG 118
Query: 158 AFVWSSKALVSEVS 171
A SS+ + EV
Sbjct: 119 ALRISSRDFLKEVQ 132
>gi|304405637|ref|ZP_07387296.1| protein of unknown function DUF901 [Paenibacillus curdlanolyticus
YK9]
gi|304345676|gb|EFM11511.1| protein of unknown function DUF901 [Paenibacillus curdlanolyticus
YK9]
Length = 176
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 44 VLLVDGYNVCGYWP---KLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMS 99
VLLVDGYNV G WP +L +H L+ AR L++ L ++ + V VVFDA +
Sbjct: 7 VLLVDGYNVIGAWPVLQRLRDH----DLEDARDALLDMLADYQGFTGMHVYVVFDAHQVP 62
Query: 100 GLPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
GL ++ V + + AD IE+ +V L G ++V TSD +QH A+G GA
Sbjct: 63 GLGAKYKQHEMVVVYTKEKETADECIERLVVELTMRG-RNIYVATSDMTEQHVAFGKGAL 121
Query: 160 VWSSKALVSEVS 171
S++ L+ ++
Sbjct: 122 RLSARELLIDIG 133
>gi|239630168|ref|ZP_04673199.1| PIN domain containing protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239527780|gb|EEQ66781.1| PIN domain containing protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 179
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+++VDGYNV G WP+L + DVAR +L++ L E+ K++VVFDA+ +P
Sbjct: 5 IMIVDGYNVIGNWPELAKLKAEDHFDVARDRLLDILAEYRSHENAKMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVD--IVFPGET-CADAWIEKEIVALRED-GCP--KVWVVTSDHLQQHAAYGAG 157
+ + D +VF E AD++IE+ L +D P ++ VVTSD +Q + G
Sbjct: 63 IGKSYAKWDLQVVFTKEDETADSYIER----LAQDMNSPLMQLVVVTSDQAEQWTVFSRG 118
Query: 158 AFVWSSKALVSEVS 171
A SS+ + EV
Sbjct: 119 ALRISSRDFLKEVQ 132
>gi|116495757|ref|YP_807491.1| PilT domain-containing protein [Lactobacillus casei ATCC 334]
gi|191639243|ref|YP_001988409.1| hypothetical protein LCABL_24850 [Lactobacillus casei BL23]
gi|301067313|ref|YP_003789336.1| PIN domain-containing protein [Lactobacillus casei str. Zhang]
gi|385820996|ref|YP_005857383.1| Small GTP-binding protein domain protein [Lactobacillus casei LC2W]
gi|385824179|ref|YP_005860521.1| Small GTP-binding protein domain protein [Lactobacillus casei
BD-II]
gi|409998106|ref|YP_006752507.1| hypothetical protein BN194_24410 [Lactobacillus casei W56]
gi|417987608|ref|ZP_12628163.1| uncharacterized DUF901 family protein [Lactobacillus casei 32G]
gi|417990630|ref|ZP_12631100.1| uncharacterized DUF901 family protein [Lactobacillus casei A2-362]
gi|417993943|ref|ZP_12634279.1| uncharacterized DUF901 family protein [Lactobacillus casei CRF28]
gi|417997098|ref|ZP_12637365.1| uncharacterized DUF901 family protein [Lactobacillus casei M36]
gi|417999939|ref|ZP_12640143.1| uncharacterized DUF901 family protein [Lactobacillus casei T71499]
gi|418003098|ref|ZP_12643199.1| uncharacterized DUF901 family protein [Lactobacillus casei UCD174]
gi|418006030|ref|ZP_12645999.1| uncharacterized DUF901 family protein [Lactobacillus casei UW1]
gi|418008847|ref|ZP_12648697.1| uncharacterized DUF901 family protein [Lactobacillus casei UW4]
gi|418010685|ref|ZP_12650456.1| uncharacterized DUF901 family protein [Lactobacillus casei Lc-10]
gi|418013995|ref|ZP_12653614.1| uncharacterized DUF901 family protein [Lactobacillus casei Lpc-37]
gi|116105907|gb|ABJ71049.1| PIN domain containing protein [Lactobacillus casei ATCC 334]
gi|190713545|emb|CAQ67551.1| YacP [Lactobacillus casei BL23]
gi|300439720|gb|ADK19486.1| PIN domain containing protein [Lactobacillus casei str. Zhang]
gi|327383323|gb|AEA54799.1| Small GTP-binding protein domain protein [Lactobacillus casei LC2W]
gi|327386506|gb|AEA57980.1| Small GTP-binding protein domain protein [Lactobacillus casei
BD-II]
gi|406359118|emb|CCK23388.1| Uncharacterized protein yacP [Lactobacillus casei W56]
gi|410522928|gb|EKP97866.1| uncharacterized DUF901 family protein [Lactobacillus casei 32G]
gi|410530852|gb|EKQ05615.1| uncharacterized DUF901 family protein [Lactobacillus casei CRF28]
gi|410533804|gb|EKQ08470.1| uncharacterized DUF901 family protein [Lactobacillus casei M36]
gi|410534334|gb|EKQ08988.1| uncharacterized DUF901 family protein [Lactobacillus casei A2-362]
gi|410538174|gb|EKQ12731.1| uncharacterized DUF901 family protein [Lactobacillus casei T71499]
gi|410542928|gb|EKQ17329.1| uncharacterized DUF901 family protein [Lactobacillus casei UCD174]
gi|410545050|gb|EKQ19358.1| uncharacterized DUF901 family protein [Lactobacillus casei UW1]
gi|410545572|gb|EKQ19863.1| uncharacterized DUF901 family protein [Lactobacillus casei UW4]
gi|410553264|gb|EKQ27267.1| uncharacterized DUF901 family protein [Lactobacillus casei Lc-10]
gi|410555086|gb|EKQ29049.1| uncharacterized DUF901 family protein [Lactobacillus casei Lpc-37]
Length = 179
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+++VDGYNV G WP+L + DVAR +L++ L E+ K++VVFDA+ +P
Sbjct: 5 IMIVDGYNVIGNWPELAKLKAEDHFDVARDRLLDILAEYRSHENAKMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVD--IVFPGET-CADAWIEKEIVALRED-GCPKVW--VVTSDHLQQHAAYGAG 157
+ + D +VF E AD++IE+ L +D P V VVTSD +Q + G
Sbjct: 63 IGKSYAKWDLQVVFTKEDETADSYIER----LAQDMNSPLVQLVVVTSDQAEQWTVFSRG 118
Query: 158 AFVWSSKALVSEVS 171
A SS+ + EV
Sbjct: 119 ALRISSRDFLKEVQ 132
>gi|257875923|ref|ZP_05655576.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257810089|gb|EEV38909.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 172
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
P+L+VDGYN+ G WP+L + RL+ AR+ L+ L ++ +K++VVFDA +
Sbjct: 3 TPLLIVDGYNMIGAWPELVLLKNQDRLEDAREALLNRLSNYAKYEGLKIIVVFDAQLVPG 62
Query: 102 PTHKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
T ++++F GET AD++IE+ I + +V V TSD +Q + GA
Sbjct: 63 VTQSYTKYQLEVIFTEEGET-ADSYIER-IAGELNNRLTQVTVATSDLAEQWVIFSQGAL 120
Query: 160 VWSSKALVSEV 170
S++ L V
Sbjct: 121 RTSARELYKSV 131
>gi|164686509|ref|ZP_02210537.1| hypothetical protein CLOBAR_00074 [Clostridium bartlettii DSM
16795]
gi|164604520|gb|EDQ97985.1| hypothetical protein CLOBAR_00074 [Clostridium bartlettii DSM
16795]
Length = 176
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L+VDGYN+ W +L+ ++ LD AR++LI ++E+S + +VVFDA + G
Sbjct: 10 LIVDGYNIINDWEELKALSVED-LDAARERLIHYIIEYSQYHGKRAIVVFDAYNVKGGAE 68
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+E + IV+ E AD++IEK I L + K+ V TSD+ +Q G GA S
Sbjct: 69 KRENRKYITIVYTKEHQTADSYIEKFISTLSK--YDKIQVATSDYAEQQIILGKGATRIS 126
Query: 163 SKAL 166
++ L
Sbjct: 127 AREL 130
>gi|342218433|ref|ZP_08711047.1| hypothetical protein HMPREF1040_0714 [Megasphaera sp. UPII 135-E]
gi|341589845|gb|EGS33107.1| hypothetical protein HMPREF1040_0714 [Megasphaera sp. UPII 135-E]
Length = 177
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYNV WP+L+ + + ++ AR +LI+ + + + +KV++VFDA+ + +
Sbjct: 4 LLIVDGYNVIHAWPELKKTYSES-MEHARDQLIDIISNYGKFKGIKVIIVFDAMYT-VAD 61
Query: 104 HKEEFIGVD--IVF--PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+G D I+F GET AD +IE+ + +++D V+V TSD +Q GA+
Sbjct: 62 ANSYTMGDDCEIIFTAKGET-ADTYIER-LAYIQKDKRRIVYVATSDGFEQQQILSTGAY 119
Query: 160 VWSSKALVSEV 170
SS+ L E+
Sbjct: 120 RLSSRELHGEI 130
>gi|145345031|ref|XP_001417027.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577253|gb|ABO95320.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 374
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 26/177 (14%)
Query: 9 RRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYW-----PKLENHF 63
RR+ +K E +EL RF P+LLVDGYNVCG + F
Sbjct: 117 RRRAEKKREARLRSELERFSGG---------GEPPLLLVDGYNVCGLEGADGVEEANAAF 167
Query: 64 IKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKE-----EFIGVDIVFPGE 118
+G +D AR L +E+++F V +V+DA + E + G V+ +
Sbjct: 168 RRGDMDAARVALTKEVMDFKSFSGYAVALVWDADRNRDKDEDEIEGDLDVDGFMTVYSVK 227
Query: 119 TCADAWIEKEIVALREDGCPK-----VWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
AD+WIE + +E G K V+V TSD+ A G GA+V ++KA V E+
Sbjct: 228 NDADSWIEARVA--QEIGADKKSNRVVYVATSDNALSSIARGTGAYVVTAKAFVEEL 282
>gi|325681224|ref|ZP_08160754.1| putative translation elongation factor G [Ruminococcus albus 8]
gi|324107146|gb|EGC01432.1| putative translation elongation factor G [Ruminococcus albus 8]
Length = 836
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ W +L+ K LD+AR +LI L F R ++++VFDA P H
Sbjct: 715 LLVDGYNIIFAWDELKKSAAKS-LDLARSQLINRLSSFQGCRGCELIIVFDAYRVKEPEH 773
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
++ V +V+ E AD +IE+ L ++ +V V TSD L+Q G GA S+
Sbjct: 774 IDKAGSVSVVYTKEAETADTYIERTAHQLAKE--HRVTVATSDGLEQVIIMGGGARRMSA 831
Query: 164 KAL 166
L
Sbjct: 832 SDL 834
>gi|27467213|ref|NP_763850.1| hypothetical protein SE0295 [Staphylococcus epidermidis ATCC 12228]
gi|57866118|ref|YP_187769.1| hypothetical protein SERP0173 [Staphylococcus epidermidis RP62A]
gi|242241864|ref|ZP_04796309.1| protein of hypothetical function DUF901 [Staphylococcus epidermidis
W23144]
gi|251809949|ref|ZP_04824422.1| protein of hypothetical function DUF901 [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875017|ref|ZP_06283892.1| conserved hypothetical protein [Staphylococcus epidermidis SK135]
gi|293367908|ref|ZP_06614546.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417646099|ref|ZP_12295978.1| hypothetical protein SEVCU144_1378 [Staphylococcus epidermidis
VCU144]
gi|417657374|ref|ZP_12307039.1| hypothetical protein SEVCU028_0298 [Staphylococcus epidermidis
VCU028]
gi|417658259|ref|ZP_12307895.1| hypothetical protein SEVCU045_0894 [Staphylococcus epidermidis
VCU045]
gi|417910342|ref|ZP_12554064.1| hypothetical protein SEVCU037_0619 [Staphylococcus epidermidis
VCU037]
gi|417911482|ref|ZP_12555187.1| hypothetical protein SEVCU105_0265 [Staphylococcus epidermidis
VCU105]
gi|417914057|ref|ZP_12557712.1| hypothetical protein SEVCU107_0972 [Staphylococcus epidermidis
VCU109]
gi|418326357|ref|ZP_12937543.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU071]
gi|418328486|ref|ZP_12939597.1| YacP-like NYN domain protein [Staphylococcus epidermidis
14.1.R1.SE]
gi|418412973|ref|ZP_12986220.1| hypothetical protein HMPREF9281_01824 [Staphylococcus epidermidis
BVS058A4]
gi|418604300|ref|ZP_13167658.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU041]
gi|418606433|ref|ZP_13169710.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU057]
gi|418609531|ref|ZP_13172673.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU065]
gi|418611860|ref|ZP_13174923.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU117]
gi|418614187|ref|ZP_13177171.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU118]
gi|418617670|ref|ZP_13180561.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU120]
gi|418621528|ref|ZP_13184297.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU123]
gi|418624664|ref|ZP_13187334.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU125]
gi|418626336|ref|ZP_13188949.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU126]
gi|418629623|ref|ZP_13192120.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU127]
gi|418631374|ref|ZP_13193838.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU128]
gi|418634236|ref|ZP_13196632.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU129]
gi|418664632|ref|ZP_13226099.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU081]
gi|419770364|ref|ZP_14296444.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-250]
gi|419772768|ref|ZP_14298794.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-K]
gi|420164368|ref|ZP_14671098.1| hypothetical protein HMPREF9995_10541 [Staphylococcus epidermidis
NIHLM095]
gi|420166788|ref|ZP_14673468.1| hypothetical protein HMPREF9994_11253 [Staphylococcus epidermidis
NIHLM088]
gi|420169348|ref|ZP_14675949.1| hypothetical protein HMPREF9993_11552 [Staphylococcus epidermidis
NIHLM087]
gi|420171644|ref|ZP_14678182.1| hypothetical protein HMPREF9992_11899 [Staphylococcus epidermidis
NIHLM070]
gi|420172250|ref|ZP_14678760.1| hypothetical protein HMPREF9991_02369 [Staphylococcus epidermidis
NIHLM067]
gi|420175662|ref|ZP_14682096.1| hypothetical protein HMPREF9990_07986 [Staphylococcus epidermidis
NIHLM061]
gi|420178480|ref|ZP_14684811.1| hypothetical protein HMPREF9989_09490 [Staphylococcus epidermidis
NIHLM057]
gi|420179579|ref|ZP_14685867.1| hypothetical protein HMPREF9988_02323 [Staphylococcus epidermidis
NIHLM053]
gi|420182224|ref|ZP_14688362.1| hypothetical protein HMPREF9987_02492 [Staphylococcus epidermidis
NIHLM049]
gi|420186445|ref|ZP_14692513.1| hypothetical protein HMPREF9986_11906 [Staphylococcus epidermidis
NIHLM040]
gi|420188153|ref|ZP_14694167.1| hypothetical protein HMPREF9985_07867 [Staphylococcus epidermidis
NIHLM039]
gi|420191074|ref|ZP_14697010.1| hypothetical protein HMPREF9984_10302 [Staphylococcus epidermidis
NIHLM037]
gi|420193487|ref|ZP_14699339.1| hypothetical protein HMPREF9983_10386 [Staphylococcus epidermidis
NIHLM023]
gi|420195777|ref|ZP_14701564.1| hypothetical protein HMPREF9982_09491 [Staphylococcus epidermidis
NIHLM021]
gi|420196762|ref|ZP_14702501.1| hypothetical protein HMPREF9981_01870 [Staphylococcus epidermidis
NIHLM020]
gi|420200931|ref|ZP_14706569.1| hypothetical protein HMPREF9980_11886 [Staphylococcus epidermidis
NIHLM031]
gi|420202996|ref|ZP_14708582.1| hypothetical protein HMPREF9979_09692 [Staphylococcus epidermidis
NIHLM018]
gi|420203532|ref|ZP_14709094.1| hypothetical protein HMPREF9978_00080 [Staphylococcus epidermidis
NIHLM015]
gi|420207047|ref|ZP_14712550.1| hypothetical protein HMPREF9977_06075 [Staphylococcus epidermidis
NIHLM008]
gi|420208681|ref|ZP_14714139.1| hypothetical protein HMPREF9976_02425 [Staphylococcus epidermidis
NIHLM003]
gi|420213013|ref|ZP_14718354.1| hypothetical protein HMPREF9975_11419 [Staphylococcus epidermidis
NIHLM001]
gi|420213826|ref|ZP_14719108.1| hypothetical protein HMPREF9974_02161 [Staphylococcus epidermidis
NIH05005]
gi|420218200|ref|ZP_14723298.1| hypothetical protein HMPREF9973_11592 [Staphylococcus epidermidis
NIH05001]
gi|420218745|ref|ZP_14723799.1| hypothetical protein HMPREF9972_00770 [Staphylococcus epidermidis
NIH04008]
gi|420222645|ref|ZP_14727562.1| hypothetical protein HMPREF1390_06311 [Staphylococcus epidermidis
NIH08001]
gi|420225502|ref|ZP_14730332.1| hypothetical protein HMPREF1389_08265 [Staphylococcus epidermidis
NIH06004]
gi|420226421|ref|ZP_14731205.1| hypothetical protein HMPREF1388_00080 [Staphylococcus epidermidis
NIH05003]
gi|420228740|ref|ZP_14733457.1| hypothetical protein HMPREF1387_00089 [Staphylococcus epidermidis
NIH04003]
gi|420231108|ref|ZP_14735763.1| hypothetical protein HMPREF1386_00090 [Staphylococcus epidermidis
NIH051668]
gi|420233744|ref|ZP_14738323.1| hypothetical protein HMPREF1385_00080 [Staphylococcus epidermidis
NIH051475]
gi|421607880|ref|ZP_16049114.1| hypothetical protein B440_05961 [Staphylococcus epidermidis
AU12-03]
gi|27314755|gb|AAO03892.1|AE016744_295 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57636776|gb|AAW53564.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
gi|242234642|gb|EES36954.1| protein of hypothetical function DUF901 [Staphylococcus epidermidis
W23144]
gi|251806492|gb|EES59149.1| protein of hypothetical function DUF901 [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296345|gb|EFA88864.1| conserved hypothetical protein [Staphylococcus epidermidis SK135]
gi|291317937|gb|EFE58345.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329729445|gb|EGG65848.1| hypothetical protein SEVCU144_1378 [Staphylococcus epidermidis
VCU144]
gi|329734679|gb|EGG70986.1| hypothetical protein SEVCU028_0298 [Staphylococcus epidermidis
VCU028]
gi|329738053|gb|EGG74274.1| hypothetical protein SEVCU045_0894 [Staphylococcus epidermidis
VCU045]
gi|341650517|gb|EGS74337.1| hypothetical protein SEVCU037_0619 [Staphylococcus epidermidis
VCU037]
gi|341653059|gb|EGS76832.1| hypothetical protein SEVCU105_0265 [Staphylococcus epidermidis
VCU105]
gi|341653888|gb|EGS77653.1| hypothetical protein SEVCU107_0972 [Staphylococcus epidermidis
VCU109]
gi|365225768|gb|EHM67006.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU071]
gi|365231804|gb|EHM72821.1| YacP-like NYN domain protein [Staphylococcus epidermidis
14.1.R1.SE]
gi|374405317|gb|EHQ76259.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU041]
gi|374406858|gb|EHQ77733.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU065]
gi|374407840|gb|EHQ78685.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU057]
gi|374410288|gb|EHQ81047.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU081]
gi|374818097|gb|EHR82269.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU120]
gi|374821375|gb|EHR85438.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU117]
gi|374821468|gb|EHR85529.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU118]
gi|374826861|gb|EHR90737.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU125]
gi|374828759|gb|EHR92584.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU123]
gi|374832893|gb|EHR96596.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU126]
gi|374833386|gb|EHR97074.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU127]
gi|374835475|gb|EHR99085.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU128]
gi|374837538|gb|EHS01102.1| YacP-like NYN domain protein [Staphylococcus epidermidis VCU129]
gi|383357310|gb|EID34785.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-250]
gi|383358861|gb|EID36303.1| YacP-like NYN domain protein [Staphylococcus aureus subsp. aureus
IS-K]
gi|394231378|gb|EJD77008.1| hypothetical protein HMPREF9993_11552 [Staphylococcus epidermidis
NIHLM087]
gi|394231757|gb|EJD77380.1| hypothetical protein HMPREF9995_10541 [Staphylococcus epidermidis
NIHLM095]
gi|394232708|gb|EJD78321.1| hypothetical protein HMPREF9994_11253 [Staphylococcus epidermidis
NIHLM088]
gi|394237106|gb|EJD82601.1| hypothetical protein HMPREF9992_11899 [Staphylococcus epidermidis
NIHLM070]
gi|394242840|gb|EJD88218.1| hypothetical protein HMPREF9990_07986 [Staphylococcus epidermidis
NIHLM061]
gi|394242890|gb|EJD88267.1| hypothetical protein HMPREF9991_02369 [Staphylococcus epidermidis
NIHLM067]
gi|394246415|gb|EJD91673.1| hypothetical protein HMPREF9989_09490 [Staphylococcus epidermidis
NIHLM057]
gi|394250208|gb|EJD95402.1| hypothetical protein HMPREF9987_02492 [Staphylococcus epidermidis
NIHLM049]
gi|394252161|gb|EJD97202.1| hypothetical protein HMPREF9986_11906 [Staphylococcus epidermidis
NIHLM040]
gi|394253568|gb|EJD98573.1| hypothetical protein HMPREF9988_02323 [Staphylococcus epidermidis
NIHLM053]
gi|394255413|gb|EJE00364.1| hypothetical protein HMPREF9985_07867 [Staphylococcus epidermidis
NIHLM039]
gi|394258032|gb|EJE02927.1| hypothetical protein HMPREF9984_10302 [Staphylococcus epidermidis
NIHLM037]
gi|394259929|gb|EJE04757.1| hypothetical protein HMPREF9983_10386 [Staphylococcus epidermidis
NIHLM023]
gi|394262898|gb|EJE07650.1| hypothetical protein HMPREF9982_09491 [Staphylococcus epidermidis
NIHLM021]
gi|394267264|gb|EJE11865.1| hypothetical protein HMPREF9981_01870 [Staphylococcus epidermidis
NIHLM020]
gi|394267412|gb|EJE12005.1| hypothetical protein HMPREF9980_11886 [Staphylococcus epidermidis
NIHLM031]
gi|394268869|gb|EJE13420.1| hypothetical protein HMPREF9979_09692 [Staphylococcus epidermidis
NIHLM018]
gi|394274493|gb|EJE18909.1| hypothetical protein HMPREF9978_00080 [Staphylococcus epidermidis
NIHLM015]
gi|394276367|gb|EJE20708.1| hypothetical protein HMPREF9977_06075 [Staphylococcus epidermidis
NIHLM008]
gi|394277261|gb|EJE21587.1| hypothetical protein HMPREF9975_11419 [Staphylococcus epidermidis
NIHLM001]
gi|394281382|gb|EJE25631.1| hypothetical protein HMPREF9976_02425 [Staphylococcus epidermidis
NIHLM003]
gi|394284224|gb|EJE28378.1| hypothetical protein HMPREF9974_02161 [Staphylococcus epidermidis
NIH05005]
gi|394284680|gb|EJE28782.1| hypothetical protein HMPREF9973_11592 [Staphylococcus epidermidis
NIH05001]
gi|394288907|gb|EJE32805.1| hypothetical protein HMPREF1390_06311 [Staphylococcus epidermidis
NIH08001]
gi|394291819|gb|EJE35604.1| hypothetical protein HMPREF9972_00770 [Staphylococcus epidermidis
NIH04008]
gi|394293569|gb|EJE37283.1| hypothetical protein HMPREF1389_08265 [Staphylococcus epidermidis
NIH06004]
gi|394298797|gb|EJE42359.1| hypothetical protein HMPREF1388_00080 [Staphylococcus epidermidis
NIH05003]
gi|394300203|gb|EJE43719.1| hypothetical protein HMPREF1387_00089 [Staphylococcus epidermidis
NIH04003]
gi|394303183|gb|EJE46611.1| hypothetical protein HMPREF1386_00090 [Staphylococcus epidermidis
NIH051668]
gi|394304918|gb|EJE48309.1| hypothetical protein HMPREF1385_00080 [Staphylococcus epidermidis
NIH051475]
gi|406656494|gb|EKC82899.1| hypothetical protein B440_05961 [Staphylococcus epidermidis
AU12-03]
gi|410879566|gb|EKS27407.1| hypothetical protein HMPREF9281_01824 [Staphylococcus epidermidis
BVS058A4]
Length = 175
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L++DGYN+ G L K L+ AR++L++ + ++ + ++V VFDA SG+
Sbjct: 6 LIIDGYNMIGQSSTLST-VAKENLEEAREQLLDTIANYNALIADEIVCVFDAYEQSGIE- 63
Query: 104 HKEEFI-GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+E F GV +F E AD++IE+ + L + VVTSD +QHA +G+GA+
Sbjct: 64 -REYFYHGVKTIFTKEKETADSFIERYVYELYNKHTTHITVVTSDMSEQHAIFGSGAYRI 122
Query: 162 SSKAL 166
SS+ +
Sbjct: 123 SSREM 127
>gi|219668254|ref|YP_002458689.1| small GTP-binding protein [Desulfitobacterium hafniense DCB-2]
gi|219538514|gb|ACL20253.1| small GTP-binding protein [Desulfitobacterium hafniense DCB-2]
Length = 882
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ WP+L+ + +D AR +L++ L + IR+ +++VVFDA + G P
Sbjct: 715 LLVDGYNIIFDWPELKE-LAQDNMDGARIRLLDILSNYQGIRKCRIIVVFDAYRVQGHPE 773
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IE+ A K+ V TSD LQQ GAG + S
Sbjct: 774 EAIDYHNILMVYTKEAQTADQYIER--FAYDHQKKYKITVATSDGLQQIIIRGAGCALLS 831
Query: 163 SKALVSEV 170
++ L EV
Sbjct: 832 ARDLKEEV 839
>gi|312109243|ref|YP_003987559.1| hypothetical protein GY4MC1_0092 [Geobacillus sp. Y4.1MC1]
gi|336233637|ref|YP_004586253.1| hypothetical protein Geoth_0112 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423718359|ref|ZP_17692541.1| hypothetical protein GT20_0089 [Geobacillus thermoglucosidans
TNO-09.020]
gi|311214344|gb|ADP72948.1| protein of unknown function DUF901 [Geobacillus sp. Y4.1MC1]
gi|335360492|gb|AEH46172.1| protein of unknown function DUF901 [Geobacillus thermoglucosidasius
C56-YS93]
gi|383365169|gb|EID42470.1| hypothetical protein GT20_0089 [Geobacillus thermoglucosidans
TNO-09.020]
Length = 170
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYN+ G WP+L + L AR LI ++ E+ KV++VFDA +
Sbjct: 3 ILIVDGYNMIGAWPELRKLKEEDDLAAARDLLISKMAEYQGFTGDKVIIVFDAHLVQGNA 62
Query: 104 HKEEFIGVDIVFPGET-CADAWIE---KEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
K + V+++F E AD IE K ++ +R KV+V TSD+ +Q + GA
Sbjct: 63 KKYKNHQVEVIFTKENETADERIERLAKSLINVR----TKVYVATSDYTEQWTIFSQGAL 118
Query: 160 VWSSKALVSEVSLI 173
S++ L+ E+ I
Sbjct: 119 RKSARELLMEMESI 132
>gi|431793513|ref|YP_007220418.1| small GTP-binding protein domain-containing protein
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430783739|gb|AGA69022.1| small GTP-binding protein domain protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 881
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L+ ++ ++ AR KL++ L + IR+ +++VVFDA + + H
Sbjct: 716 LLVDGYNIIHAWPELKE-LVEDHMEGARIKLLDSLSNYQGIRKCQIIVVFDAHL--VQGH 772
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+EE I + +VF E AD +IE+ A ++ V TSD L+Q GAG +
Sbjct: 773 REEAIDYQNIHLVFTKEAQTADQYIER--FAHDNRKRYQITVATSDGLEQIIIRGAGCSL 830
Query: 161 WSSKALVSEV 170
S++ L E+
Sbjct: 831 LSARELKLEI 840
>gi|338813993|ref|ZP_08626052.1| hypothetical protein ALO_17341 [Acetonema longum DSM 6540]
gi|337274018|gb|EGO62596.1| hypothetical protein ALO_17341 [Acetonema longum DSM 6540]
Length = 183
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VL+VDGYNV WP+L LD AR L++ L E+ + +V+VVFDA + PT
Sbjct: 9 VLIVDGYNVIHAWPELAGMLEN--LDHARDCLVDILAEYGAFKGWRVLVVFDAHSAVSPT 66
Query: 104 ---HKEEFIGVDIVFPGET-CADAWIEKEIVA-LREDGCPKVWVVTSDHLQQHAAYGAGA 158
E GV++ + E AD++IEK + +R++ V+VVTSD ++Q G+G
Sbjct: 67 TSSKTETIAGVEVAYTAEGETADSYIEKLVYQWVRQE--KSVYVVTSDWIEQMVILGSGG 124
Query: 159 FVWSSKALVSEVSLI 173
+ S++ L +V +
Sbjct: 125 YRISARELAVDVKQV 139
>gi|390456398|ref|ZP_10241926.1| hypothetical protein PpeoK3_20466 [Paenibacillus peoriae KCTC 3763]
Length = 173
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP+L + ++ + AR +L+E L + +V+VVFDA +P
Sbjct: 7 VLLVDGYNMIGAWPEL-SALVESGMQEARDRLLERLADHQAYSGRRVIVVFDAYR--VPG 63
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ F V I F E AD IE+ + L ++V TSD ++QH A+G GA
Sbjct: 64 LGKTFAQSKVQIYFTREKETADECIERLVREL-SGKRRSIYVATSDQVEQHVAFGQGALR 122
Query: 161 WSSK 164
S++
Sbjct: 123 VSAR 126
>gi|253681460|ref|ZP_04862257.1| tetracycline resistance protein [Clostridium botulinum D str. 1873]
gi|253561172|gb|EES90624.1| tetracycline resistance protein [Clostridium botulinum D str. 1873]
Length = 169
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
+ VDGYNV WP+L+ + + AR KLIE + + K+ VVFDA L+ G
Sbjct: 4 IFVDGYNVINSWPELK-KIKEYSFEAARSKLIELMQNYGAYNGYKIFVVFDAHLLKGNLE 62
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
KE V +VF GET AD++IE+ + L +V VVTSD L+Q + GA
Sbjct: 63 KKERMNNVIVVFTKEGET-ADSFIERYVNNLGRK--IEVCVVTSDSLEQQVTFQRGATRM 119
Query: 162 SSKALVSEV 170
SS +EV
Sbjct: 120 SSIEFYNEV 128
>gi|251799663|ref|YP_003014394.1| hypothetical protein Pjdr2_5701 [Paenibacillus sp. JDR-2]
gi|247547289|gb|ACT04308.1| protein of unknown function DUF901 [Paenibacillus sp. JDR-2]
Length = 174
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 19/137 (13%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-----LM 98
+LLVDGYN+ G WP LE + L+ AR KL++ L ++ + V VVFDA L
Sbjct: 7 ILLVDGYNMIGAWPMLEK-LKEIDLEEARDKLLDMLADYQGFSGMTVYVVFDAHQVPGLG 65
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAY 154
+ HK + IV+ E AD IE+ E+ A R + V+V TSD ++QH A+
Sbjct: 66 ATYRHHK-----LTIVYTKEKETADECIERLVTELTARRRN----VFVATSDLVEQHVAF 116
Query: 155 GAGAFVWSSKALVSEVS 171
G GA S++ L+ +
Sbjct: 117 GKGALRLSARELLINIQ 133
>gi|78044732|ref|YP_361139.1| hypothetical protein CHY_2334 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996847|gb|ABB15746.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 168
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 13/134 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
+L+DGYN+ WP+L + L+ AR+ L E L+ + + +V++V+DA
Sbjct: 5 VLIDGYNLLFNWPELNKLKDETSLEHAREVLKERLINYRALTGREVIIVYDAHQQ--KES 62
Query: 105 KEEFI--GVDIVF--PGETCADAWIEKEIVALREDGCP--KVWVVTSDHLQQHAAYGAGA 158
+ EF G+ +VF GET AD +IEK++ L P +V+VVT D LQQ +G GA
Sbjct: 63 RREFFEAGITVVFTESGET-ADHFIEKKVQEL----LPGNRVYVVTQDELQQKLIFGYGA 117
Query: 159 FVWSSKALVSEVSL 172
S + L++++ +
Sbjct: 118 LRISLRELLNDLKI 131
>gi|397628656|gb|EJK69000.1| hypothetical protein THAOC_09787 [Thalassiosira oceanica]
Length = 462
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 3 RPSTSYRRK--KVEKEELPEDT-ELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKL 59
+ T+YR++ E++++ ED + R + + G A P++LVDGYNV WP+L
Sbjct: 173 KKKTAYRKRLDDEEQQQVIEDKRKRARDVDWDVVLSHGNGTATPLVLVDGYNVVYQWPRL 232
Query: 60 ENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFD-------------------ALMSG 100
+ +KG ++ AR LI +L + I+ ++ VFD +L+
Sbjct: 233 KKQMLKGHIERARDMLIRDLEDLHGIKGWRIECVFDGFGRSTVGPLGESPASGKVSLLER 292
Query: 101 LPTHKEEFIGVDIVFPG-ETCADAWIEKEIVALREDGCPKVW-------VVTSDHLQQHA 152
++ GV IV+ G AD++IEK + + K+ V ++D + +
Sbjct: 293 EFNRQDTGRGVRIVYSGVGASADSYIEKRCLDAKAVTQGKLSVSKGSLIVASNDAMIRTV 352
Query: 153 AYGAGAFVWSSKALVSEVSLIIYYTC 178
A G+GA SS+ LV E+ + T
Sbjct: 353 AVGSGALCMSSERLVDELKAVKKATA 378
>gi|421076443|ref|ZP_15537430.1| protein of unknown function DUF901 [Pelosinus fermentans JBW45]
gi|392525454|gb|EIW48593.1| protein of unknown function DUF901 [Pelosinus fermentans JBW45]
Length = 171
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 15/134 (11%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYNV WP+L K L+ AR KLI+ + + +++ V ++FDA +SG
Sbjct: 4 ILLVDGYNVIHAWPELSAR--KDNLEDARDKLIDMMASYGAFQDLAVTIIFDANAVSGAA 61
Query: 103 THKEEFIG-VDIVFP--GETCADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGA 156
E +G V +++ GET AD+ IE+ ++V R+ V+VVTSD ++Q GA
Sbjct: 62 VF-ENLVGQVSVIYTQEGET-ADSHIERMAYDMVRQRK----LVYVVTSDWVEQMVILGA 115
Query: 157 GAFVWSSKALVSEV 170
GA+ S++ L+ +V
Sbjct: 116 GAYRISARELLQDV 129
>gi|81429290|ref|YP_396291.1| hypothetical protein LSA1678 [Lactobacillus sakei subsp. sakei 23K]
gi|78610933|emb|CAI55985.1| Hypothetical protein LCA_1678 [Lactobacillus sakei subsp. sakei
23K]
Length = 177
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+ DGYN+ G WP+L L AR L++ L E+ RE+++++VFDA+ + G+
Sbjct: 5 ILIADGYNIIGNWPELNKLKQNDHLADARDSLLQTLSEYRKFREIEIILVFDAMYVPGIK 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
E++ +++VF E AD++IE + +V VV+SD +Q + GA
Sbjct: 65 QSYEQY-NLEVVFTEEDETADSYIEA-LAGKLMSPINQVTVVSSDQAEQWTIFSRGALRV 122
Query: 162 SSKALVSEV 170
SS E+
Sbjct: 123 SSHDFYREI 131
>gi|89893877|ref|YP_517364.1| hypothetical protein DSY1131 [Desulfitobacterium hafniense Y51]
gi|423075444|ref|ZP_17064161.1| putative translation elongation factor G [Desulfitobacterium
hafniense DP7]
gi|89333325|dbj|BAE82920.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361853533|gb|EHL05678.1| putative translation elongation factor G [Desulfitobacterium
hafniense DP7]
Length = 882
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ WP+L+ + +D AR +L++ L + IR +++VVFDA + G P
Sbjct: 715 LLVDGYNIIFDWPELKE-LAQDNMDGARIRLLDILSNYQGIRRCRIIVVFDAYRVQGHPE 773
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IE+ A K+ V TSD LQQ GAG + S
Sbjct: 774 EAIDYHNILMVYTKEAQTADQYIER--FAYDHQKKYKITVATSDGLQQIIIRGAGCALLS 831
Query: 163 SKALVSEV 170
++ L EV
Sbjct: 832 ARDLKEEV 839
>gi|281416746|ref|ZP_06247766.1| small GTP-binding protein [Clostridium thermocellum JW20]
gi|281408148|gb|EFB38406.1| small GTP-binding protein [Clostridium thermocellum JW20]
Length = 888
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LVDGYN+ WP+L+ LD AR KL++ L + IR V+VVFDA + H
Sbjct: 713 FLVDGYNIIYAWPELKK-LADENLDGARMKLLDMLSNYQWIRRCHVIVVFDAYR--VEGH 769
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
KEE I + +V+ E AD +IEK A + V TSD LQQ G G +
Sbjct: 770 KEEIIDYYNIHVVYTREAQTADQYIEK--FAYENSKNYDITVATSDGLQQIIVRGEGCAL 827
Query: 161 WSSKALVSEV 170
S++ L +E+
Sbjct: 828 LSARELKAEL 837
>gi|407475975|ref|YP_006789852.1| hypothetical protein Eab7_0080 [Exiguobacterium antarcticum B7]
gi|407060054|gb|AFS69244.1| hypothetical protein Eab7_0080 [Exiguobacterium antarcticum B7]
Length = 239
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L+VDGYN+ G WP+ + ++AR++L++ + E+ + + V +VFDA +
Sbjct: 6 LIVDGYNIIGAWPEFRT-LREQDFELARERLVDAMAEYQAVTGISVTIVFDAYLQPGRES 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + G+++++ E AD WIEK +D K+ V T+D +Q + GA S+
Sbjct: 65 RIKKSGIEVIYTRENETADEWIEKTAAEWLQDIRVKLTVATNDFTEQWVIFTLGALRISA 124
Query: 164 KAL 166
+ L
Sbjct: 125 QEL 127
>gi|134298075|ref|YP_001111571.1| hypothetical protein Dred_0197 [Desulfotomaculum reducens MI-1]
gi|134050775|gb|ABO48746.1| protein of unknown function DUF901 [Desulfotomaculum reducens MI-1]
Length = 170
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM--SGLPT 103
+VDGYN+ WP+ EN G LD R +LI+ L F+ + V VVFDA + SG+
Sbjct: 6 VVDGYNIIHAWPEYENMIGTG-LDHCRDRLIDILANFAGLDGSSVTVVFDAHLVKSGM-G 63
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
H E G+++ + GET AD+ IE+ + L + G V+VVTSD +Q +G GA+
Sbjct: 64 HHEIIHGIEVYYTQEGET-ADSLIERIVGDLGKQG--NVYVVTSDWDEQKVIFGRGAYRL 120
Query: 162 SSKALVSEV 170
+ K ++V
Sbjct: 121 TPKEFRTQV 129
>gi|126697622|ref|YP_001086519.1| ribonuclease [Clostridium difficile 630]
gi|254973713|ref|ZP_05270185.1| hypothetical protein CdifQC_00269 [Clostridium difficile QCD-66c26]
gi|255091103|ref|ZP_05320581.1| hypothetical protein CdifC_00289 [Clostridium difficile CIP 107932]
gi|255099215|ref|ZP_05328192.1| hypothetical protein CdifQCD-6_00263 [Clostridium difficile
QCD-63q42]
gi|255304998|ref|ZP_05349170.1| hypothetical protein CdifA_00283 [Clostridium difficile ATCC 43255]
gi|255312758|ref|ZP_05354341.1| hypothetical protein CdifQCD-7_00274 [Clostridium difficile
QCD-76w55]
gi|255515518|ref|ZP_05383194.1| hypothetical protein CdifQCD-_00282 [Clostridium difficile
QCD-97b34]
gi|255648611|ref|ZP_05395513.1| hypothetical protein CdifQCD_00279 [Clostridium difficile
QCD-37x79]
gi|255654144|ref|ZP_05399553.1| hypothetical protein CdifQCD-2_00267 [Clostridium difficile
QCD-23m63]
gi|260681828|ref|YP_003213113.1| hypothetical protein CD196_0061 [Clostridium difficile CD196]
gi|260685426|ref|YP_003216559.1| hypothetical protein CDR20291_0049 [Clostridium difficile R20291]
gi|296449817|ref|ZP_06891584.1| tetracycline resistance protein [Clostridium difficile NAP08]
gi|296877881|ref|ZP_06901901.1| tetracycline resistance protein [Clostridium difficile NAP07]
gi|306518734|ref|ZP_07405081.1| hypothetical protein CdifQ_00312 [Clostridium difficile QCD-32g58]
gi|384359381|ref|YP_006197233.1| hypothetical protein CDBI1_00320 [Clostridium difficile BI1]
gi|423089336|ref|ZP_17077696.1| hypothetical protein HMPREF9945_00879 [Clostridium difficile
70-100-2010]
gi|115249059|emb|CAJ66870.1| putative ribonuclease [Clostridium difficile 630]
gi|260207991|emb|CBA60153.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260211442|emb|CBE01548.1| conserved hypothetical protein [Clostridium difficile R20291]
gi|296261304|gb|EFH08132.1| tetracycline resistance protein [Clostridium difficile NAP08]
gi|296431078|gb|EFH16905.1| tetracycline resistance protein [Clostridium difficile NAP07]
gi|357558272|gb|EHJ39771.1| hypothetical protein HMPREF9945_00879 [Clostridium difficile
70-100-2010]
Length = 175
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ W L+ K L+ +R+KLI++++EFS K ++VFDA
Sbjct: 9 LIIDGYNIINAWDNLK-ELAKEDLEDSREKLIDDIIEFSEFMGYKTIIVFDAYNVKNSRE 67
Query: 105 K-EEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
K E+ + IV+ E AD++IEK I +L + V V T+D+ +Q G GA S
Sbjct: 68 KVEKRKHITIVYTREHQTADSYIEKFITSLSK--YDDVKVATNDYAEQQMILGKGATRMS 125
Query: 163 SKALVSEV 170
++ L E+
Sbjct: 126 ARELKLEL 133
>gi|389816098|ref|ZP_10207285.1| PIN domain/Zn-ribbon domain-containing protein [Planococcus
antarcticus DSM 14505]
gi|388465362|gb|EIM07680.1| PIN domain/Zn-ribbon domain-containing protein [Planococcus
antarcticus DSM 14505]
Length = 169
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 79/136 (58%), Gaps = 9/136 (6%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G W +L+ K +L AR +LIE + E+ + +V++VFDA L+ G
Sbjct: 1 MNILLVDGYNIIGDWVELQ-ELKKDKLANARDRLIERMAEYRSYKGWRVIIVFDAHLVPG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVAL--REDGCPKVWVVTSDHLQQHAAYGAG 157
+ K V++++ E+ AD IEK + +L R D +++V TSD +Q +G G
Sbjct: 60 IEA-KNLHHDVEVIYTKESETADERIEKLVASLYTRRD---QIYVATSDLTEQWVIFGKG 115
Query: 158 AFVWSSKALVSEVSLI 173
A S++ L E++ I
Sbjct: 116 ALRISARELEIEMAEI 131
>gi|354806648|ref|ZP_09040129.1| hypothetical protein CRL705_50 [Lactobacillus curvatus CRL 705]
gi|354514832|gb|EHE86798.1| hypothetical protein CRL705_50 [Lactobacillus curvatus CRL 705]
Length = 177
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 6/130 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+ DGYN+ G WP+L L AR +L++ L E+ RE++V++VFDA+ +P
Sbjct: 5 ILIADGYNIIGNWPELNKLKQNDHLADARDRLLQILSEYRKFREIEVILVFDAMY--VPG 62
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K+ ++ +++VF E AD++IE L +V VV+SD +Q + GA
Sbjct: 63 IKQSYVQYNLEVVFTDEDETADSYIEGLAGKLMS-PITQVTVVSSDQAEQWTIFSRGALR 121
Query: 161 WSSKALVSEV 170
SS E+
Sbjct: 122 VSSHDFYREI 131
>gi|352516201|ref|YP_004885518.1| hypothetical protein TEH_00270 [Tetragenococcus halophilus NBRC
12172]
gi|348600308|dbj|BAK93354.1| hypothetical protein TEH_00270 [Tetragenococcus halophilus NBRC
12172]
Length = 172
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
P+L+VDGYN+ G WP+L K ++ AR++L++ L ++ ++ V+VVFDA
Sbjct: 4 PLLIVDGYNMIGAWPELVQLKNKDLMEDAREQLLQSLSNYAKYEKLAVIVVFDAQFVPGV 63
Query: 103 THKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
T +++VF GET AD++IE+ I D +V V TSD +Q + GA
Sbjct: 64 TKNYARYQLEVVFTEEGET-ADSYIER-IAGKLNDIMTQVSVATSDLAEQWVIFSQGALR 121
Query: 161 WSSKALVSEV 170
S++ L V
Sbjct: 122 VSARELYKTV 131
>gi|172056122|ref|YP_001812582.1| hypothetical protein Exig_0078 [Exiguobacterium sibiricum 255-15]
gi|171988643|gb|ACB59565.1| protein of unknown function DUF901 [Exiguobacterium sibiricum
255-15]
Length = 176
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L+VDGYN+ G WP+ + ++AR++L++ + E+ + + V +VFDA +
Sbjct: 6 LIVDGYNIIGAWPEFRT-LREQDFELARERLVDAMAEYQAVTGISVTIVFDAYLQPGRES 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + G+++++ E AD WIEK +D K+ V T+D +Q + GA S+
Sbjct: 65 RIKKSGIEVIYTRENETADEWIEKTAAEWLQDIRVKLTVATNDFTEQWVIFTLGALRVSA 124
Query: 164 KAL 166
+ L
Sbjct: 125 QEL 127
>gi|373465962|ref|ZP_09557388.1| hypothetical protein HMPREF9104_03115 [Lactobacillus kisonensis
F0435]
gi|371758221|gb|EHO46995.1| hypothetical protein HMPREF9104_03115 [Lactobacillus kisonensis
F0435]
Length = 176
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP L RL AR +L+ EL E+ R+V ++VVFDA+ +P
Sbjct: 5 LLIVDAYNMIGNWPHLNKLKQLDRLADARDQLLAELSEYKKYRDVDMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ + F D+ + AD++IE + ++ +V V TSD +Q + GA
Sbjct: 63 NSKSFRQFDMEIVWTSKDQTADSYIE-ALTRRKQSRFTQVIVATSDQAEQWTVFAGGALR 121
Query: 161 WSSKALVSEV 170
++ L+++V
Sbjct: 122 IPARELLADV 131
>gi|20808678|ref|NP_623849.1| RNA-binding protein [Thermoanaerobacter tengcongensis MB4]
gi|20517314|gb|AAM25453.1| predicted RNA-binding protein containing a PIN domain
[Thermoanaerobacter tengcongensis MB4]
Length = 167
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
+LVDGYNV W L+ K L+ AR KLI+ L +F + +++VFDA+ + G
Sbjct: 5 MLVDGYNVINNWQMLK-EIAKRSLEDARDKLIDLLADFKGYTGINIILVFDAMYVKGSLE 63
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVAL--REDGCPKVWVVTSDHLQQHAAYGAGAFV 160
EE G+++V+ E AD +IE ++V L +ED V VV+SD + Q GA
Sbjct: 64 KHEEINGIEVVYTKEGESADHFIESKVVELVKKED----VVVVSSDWIVQQVVMAHGAIR 119
Query: 161 WSSKALVSEVSLII 174
S++ L E++ I
Sbjct: 120 MSARELYEEMNRYI 133
>gi|325567612|ref|ZP_08144279.1| tetracycline resistance protein [Enterococcus casseliflavus ATCC
12755]
gi|420261770|ref|ZP_14764414.1| tetracycline resistance protein [Enterococcus sp. C1]
gi|325159045|gb|EGC71191.1| tetracycline resistance protein [Enterococcus casseliflavus ATCC
12755]
gi|394771704|gb|EJF51465.1| tetracycline resistance protein [Enterococcus sp. C1]
Length = 172
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
P+L+VDGYN+ G WP+L + RL+ AR+ L+ L ++ ++++VVFDA +
Sbjct: 3 TPLLIVDGYNMIGAWPELVLLKNQDRLEDAREALLNRLSNYAKYEGLRIIVVFDAQLVPG 62
Query: 102 PTHKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
T ++++F GET AD++IE+ I + +V V TSD +Q + GA
Sbjct: 63 VTQSYTKYQLEVIFTEEGET-ADSYIER-IAGELNNRLTQVTVATSDLAEQWVIFSQGAL 120
Query: 160 VWSSKALVSEV 170
S++ L V
Sbjct: 121 RTSARELYKSV 131
>gi|331268395|ref|YP_004394887.1| hypothetical protein CbC4_0210 [Clostridium botulinum BKT015925]
gi|329124945|gb|AEB74890.1| conserved hypothetical protein [Clostridium botulinum BKT015925]
Length = 169
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
+ VDGYNV WP L+ + + AR KLIE + + K+ VVFDA L+ G
Sbjct: 4 VFVDGYNVINSWPDLK-KIKEYSFEAARNKLIELMQNYGAYNGYKIFVVFDAHLLKGSLE 62
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
KE V +VF GET AD++IE+ + L +V VVTSD L+Q + GA
Sbjct: 63 KKERMNNVIVVFTKEGET-ADSFIERYVSNLGRK--IEVCVVTSDSLEQQVTFQRGATRM 119
Query: 162 SSKALVSEV 170
SS +EV
Sbjct: 120 SSIEFYNEV 128
>gi|227518062|ref|ZP_03948111.1| protein of hypothetical function DUF901 [Enterococcus faecalis
TX0104]
gi|424678695|ref|ZP_18115533.1| hypothetical protein HMPREF1328_02685 [Enterococcus faecalis
ERV103]
gi|424679926|ref|ZP_18116740.1| hypothetical protein HMPREF1329_00736 [Enterococcus faecalis
ERV116]
gi|424685119|ref|ZP_18121821.1| hypothetical protein HMPREF1330_02728 [Enterococcus faecalis
ERV129]
gi|424687818|ref|ZP_18124444.1| hypothetical protein HMPREF1331_02082 [Enterococcus faecalis ERV25]
gi|424691342|ref|ZP_18127865.1| hypothetical protein HMPREF1332_02316 [Enterococcus faecalis ERV31]
gi|424692735|ref|ZP_18129214.1| hypothetical protein HMPREF1333_00505 [Enterococcus faecalis ERV37]
gi|424698920|ref|ZP_18135164.1| hypothetical protein HMPREF1334_03242 [Enterococcus faecalis ERV41]
gi|424700056|ref|ZP_18136262.1| hypothetical protein HMPREF1335_01010 [Enterococcus faecalis ERV62]
gi|424705098|ref|ZP_18141184.1| hypothetical protein HMPREF1336_02757 [Enterococcus faecalis ERV63]
gi|424706209|ref|ZP_18142216.1| hypothetical protein HMPREF1337_00408 [Enterococcus faecalis ERV65]
gi|424716050|ref|ZP_18145368.1| hypothetical protein HMPREF1338_00361 [Enterococcus faecalis ERV68]
gi|424719783|ref|ZP_18148917.1| hypothetical protein HMPREF1339_00632 [Enterococcus faecalis ERV72]
gi|424722892|ref|ZP_18151917.1| hypothetical protein HMPREF1340_00373 [Enterococcus faecalis ERV73]
gi|424727879|ref|ZP_18156506.1| hypothetical protein HMPREF1341_01719 [Enterococcus faecalis ERV81]
gi|424740153|ref|ZP_18168562.1| hypothetical protein HMPREF1342_01339 [Enterococcus faecalis ERV85]
gi|424754717|ref|ZP_18182626.1| hypothetical protein HMPREF1343_02657 [Enterococcus faecalis ERV93]
gi|227074498|gb|EEI12461.1| protein of hypothetical function DUF901 [Enterococcus faecalis
TX0104]
gi|402350998|gb|EJU85892.1| hypothetical protein HMPREF1328_02685 [Enterococcus faecalis
ERV103]
gi|402355395|gb|EJU90170.1| hypothetical protein HMPREF1329_00736 [Enterococcus faecalis
ERV116]
gi|402359445|gb|EJU94075.1| hypothetical protein HMPREF1330_02728 [Enterococcus faecalis
ERV129]
gi|402362251|gb|EJU96787.1| hypothetical protein HMPREF1332_02316 [Enterococcus faecalis ERV31]
gi|402362952|gb|EJU97463.1| hypothetical protein HMPREF1331_02082 [Enterococcus faecalis ERV25]
gi|402369953|gb|EJV04199.1| hypothetical protein HMPREF1334_03242 [Enterococcus faecalis ERV41]
gi|402374910|gb|EJV08912.1| hypothetical protein HMPREF1335_01010 [Enterococcus faecalis ERV62]
gi|402376938|gb|EJV10850.1| hypothetical protein HMPREF1333_00505 [Enterococcus faecalis ERV37]
gi|402380260|gb|EJV14021.1| hypothetical protein HMPREF1336_02757 [Enterococcus faecalis ERV63]
gi|402388303|gb|EJV21749.1| hypothetical protein HMPREF1337_00408 [Enterococcus faecalis ERV65]
gi|402388976|gb|EJV22397.1| hypothetical protein HMPREF1338_00361 [Enterococcus faecalis ERV68]
gi|402395263|gb|EJV28373.1| hypothetical protein HMPREF1339_00632 [Enterococcus faecalis ERV72]
gi|402395459|gb|EJV28564.1| hypothetical protein HMPREF1341_01719 [Enterococcus faecalis ERV81]
gi|402400663|gb|EJV33479.1| hypothetical protein HMPREF1340_00373 [Enterococcus faecalis ERV73]
gi|402402525|gb|EJV35234.1| hypothetical protein HMPREF1342_01339 [Enterococcus faecalis ERV85]
gi|402402826|gb|EJV35523.1| hypothetical protein HMPREF1343_02657 [Enterococcus faecalis ERV93]
Length = 176
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + RL+ AR+ L+ L ++ V+++VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGAWPELVQLKKQERLEDARELLLSRLSNYAKYEGVEIIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
++++ + +VF E AD++IE+ + + D +V V TSD +Q + GA
Sbjct: 65 QTYKKYL-LTVVFTKEDETADSYIER-LAGEKNDRLTQVTVATSDLAEQWVVFSQGALRT 122
Query: 162 SSKALVSEVS 171
S+ L V
Sbjct: 123 SANELYKAVQ 132
>gi|312865418|ref|ZP_07725645.1| conserved hypothetical protein [Streptococcus downei F0415]
gi|311098936|gb|EFQ57153.1| conserved hypothetical protein [Streptococcus downei F0415]
Length = 170
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F +LD AR L+ +L ++ +++++ VFDA
Sbjct: 5 ILLVDGYNMIAFWQETYQLFKTNQLDAARNILLRKLSHYASFEDLEIICVFDAQYVPGSR 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
K E + +VF E AD++IE+ L +V V TSD +Q + GA S
Sbjct: 65 QKYEDYALTVVFTQEDETADSYIERTAAELNS-PLNRVEVATSDLNEQWTVFSQGALRVS 123
Query: 163 SKALVSEVSLI 173
++ L V+++
Sbjct: 124 ARELEERVNVV 134
>gi|304315922|ref|YP_003851067.1| hypothetical protein Tthe_0414 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433654080|ref|YP_007297788.1| putative RNA-binding protein containing a PIN domain
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|302777424|gb|ADL67983.1| protein of unknown function DUF901 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433292269|gb|AGB18091.1| putative RNA-binding protein containing a PIN domain
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 164
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
+++DGYN+ W L+ K L+ ARQKLI+ L+ F +++VFDA+ + G
Sbjct: 3 MVIDGYNIINNWQDLKLE-AKSSLEDARQKLIDILLNFRGYTGFNIILVFDAMYVKGSQQ 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIE---KEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
E + G+++V+ E AD++IE K+I+ KV VVTSD + Q G GA
Sbjct: 62 KHEYYSGLEVVYTKEGESADSYIEGIIKDIIK-----NDKVVVVTSDWILQQVVLGQGAI 116
Query: 160 VWSSKALVSEVS 171
S++ L E++
Sbjct: 117 RMSARELYEELN 128
>gi|392958563|ref|ZP_10324072.1| YacP [Bacillus macauensis ZFHKF-1]
gi|391875464|gb|EIT84075.1| YacP [Bacillus macauensis ZFHKF-1]
Length = 169
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 43 PVLLVDGYNVCGYWPKL----ENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM 98
+LLVDGYNV G WP+L + F K AR LIE++ E+ +VVVVFDA M
Sbjct: 3 TLLLVDGYNVIGAWPELRELKDQDFAK-----ARDFLIEKMAEYQAYTGFQVVVVFDAHM 57
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
K + V+++F E AD IE+ + + +++V TSD +Q + G
Sbjct: 58 VAGTEKKTKNYKVEVIFTRENETADERIERLAIEYKSINT-RIYVATSDSTEQWVVFAKG 116
Query: 158 AFVWSSKALVSEVSLI 173
A S++ L E+ I
Sbjct: 117 ALRKSARELKIEMDDI 132
>gi|423080647|ref|ZP_17069266.1| hypothetical protein HMPREF1122_00246 [Clostridium difficile
002-P50-2011]
gi|423085094|ref|ZP_17073551.1| hypothetical protein HMPREF1123_00694 [Clostridium difficile
050-P50-2011]
gi|357550742|gb|EHJ32551.1| hypothetical protein HMPREF1123_00694 [Clostridium difficile
050-P50-2011]
gi|357552711|gb|EHJ34478.1| hypothetical protein HMPREF1122_00246 [Clostridium difficile
002-P50-2011]
Length = 175
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS 99
N L++DGYN+ W L+ K L+ +R+KLI++++EFS K ++VFDA
Sbjct: 4 NINHYLIIDGYNIINAWDNLK-ELAKEDLEDSREKLIDDIIEFSEFMGYKTIIVFDAYNV 62
Query: 100 GLPTHK-EEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
K E+ + IV+ E AD++IEK I +L V V T+D+ +Q G G
Sbjct: 63 KNSREKVEKRKHITIVYTREHQTADSYIEKFITSL--SKYDYVKVATNDYAEQQMILGKG 120
Query: 158 AFVWSSKALVSEV 170
A S++ L E+
Sbjct: 121 ATRMSARELKLEL 133
>gi|424780855|ref|ZP_18207722.1| Hypothetical protein DUF901 [Catellicoccus marimammalium M35/04/3]
gi|422842556|gb|EKU27007.1| Hypothetical protein DUF901 [Catellicoccus marimammalium M35/04/3]
Length = 170
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
++VDGYN+ G WP L K L+ AR+ L+++L E++ + ++V+VVFDA T
Sbjct: 1 MIVDGYNMIGAWPNLIPFKKKDELEEAREALLKDLSEYAKFKGIEVIVVFDAQFVPGITQ 60
Query: 105 KEEFIGVDIVFPG-ETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
E + +VF + AD +IE + R + +V V TSD +Q + GA S+
Sbjct: 61 TYEQYKLQVVFTAKDETADTYIEA-LAKERMNVLTQVTVATSDLAEQWQIFSVGALRKSA 119
Query: 164 KALVSEV 170
+ L +V
Sbjct: 120 RELYKDV 126
>gi|323490596|ref|ZP_08095801.1| PIN domain containing protein [Planococcus donghaensis MPA1U2]
gi|323395688|gb|EGA88529.1| PIN domain containing protein [Planococcus donghaensis MPA1U2]
Length = 169
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 9/129 (6%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ +LLVDGYN+ G W +L+ K +L AR +LIE + E+ + +V++VFDA L+ G
Sbjct: 1 MNILLVDGYNIIGDWVELQ-ELKKDKLANARDRLIERMAEYRSYKGWRVIIVFDAHLVPG 59
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVAL--REDGCPKVWVVTSDHLQQHAAYGAG 157
+ K V++++ E+ AD IEK + +L R D +++V TSD +Q +G G
Sbjct: 60 IEA-KNLHHDVEVIYTKESETADERIEKLVASLHTRRD---QIYVATSDLTEQWVIFGKG 115
Query: 158 AFVWSSKAL 166
A S++ L
Sbjct: 116 ALRISAREL 124
>gi|168187717|ref|ZP_02622352.1| tetracycline resistance protein [Clostridium botulinum C str.
Eklund]
gi|169294448|gb|EDS76581.1| tetracycline resistance protein [Clostridium botulinum C str.
Eklund]
Length = 169
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
+ VDGYNV WP+L N + + AR KLIE + + K+ +VFDA L+ G
Sbjct: 4 VFVDGYNVINSWPQL-NKIKEYSFEAARNKLIEIMQNYGAYNGYKIFLVFDAHLVKGSIE 62
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
KE + +VF GET AD++IE+ + + +V VVTSD L+Q + GA
Sbjct: 63 KKERMSNLMVVFTKEGET-ADSFIERYVNNIGRK--VEVCVVTSDSLEQQVTFQRGATRM 119
Query: 162 SSKALVSEV 170
SS +EV
Sbjct: 120 SSIEFYNEV 128
>gi|347534164|ref|YP_004840834.1| hypothetical protein LSA_04540 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504220|gb|AEN98902.1| Uncharacterized protein yacP [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 182
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YNV G W L + +L AR +LI ELVE+ +++VVFDA+ + GL
Sbjct: 12 LLIVDAYNVIGNWEHLNRLKLDNKLPEARDELISELVEYQKYSGKEIIVVFDAMYVPGLA 71
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGC-PKVWVVTSDHLQQHAAYGAGAF 159
K + + +V+ + AD +I E +A RE +V V TSDH +Q + AGA
Sbjct: 72 KSK-QVNNIKVVWTNKNETADTYI--EALAAREQSLFMQVEVATSDHAEQWTIFSAGAL 127
>gi|329925599|ref|ZP_08280440.1| hypothetical protein HMPREF9412_2939 [Paenibacillus sp. HGF5]
gi|328939728|gb|EGG36070.1| hypothetical protein HMPREF9412_2939 [Paenibacillus sp. HGF5]
Length = 173
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP L + AR L+E+L ++ ++VVV+FDA +P
Sbjct: 8 VLLVDGYNMIGGWPHLAK-LANSSMHEARDLLLEKLADYQAYSGLRVVVIFDAYR--VPG 64
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ + V + F E AD IE+ +V K++V TSD ++QH + GA
Sbjct: 65 LGKSYTQGKVQVFFTKEKETADECIER-LVGEFSHRRRKIYVATSDLIEQHVIFARGALR 123
Query: 161 WSSKALVSEV 170
S++ L+SEV
Sbjct: 124 LSARELLSEV 133
>gi|335429073|ref|ZP_08555979.1| small GTP-binding protein [Haloplasma contractile SSD-17B]
gi|335430041|ref|ZP_08556936.1| small GTP-binding protein [Haloplasma contractile SSD-17B]
gi|334888457|gb|EGM26754.1| small GTP-binding protein [Haloplasma contractile SSD-17B]
gi|334890777|gb|EGM29038.1| small GTP-binding protein [Haloplasma contractile SSD-17B]
Length = 882
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 36/202 (17%)
Query: 3 RPSTSYRRK-KVEKEELPEDTELYRFFSYIYNTNQGID----------------NAVPV- 44
+ SYR + K + D E+ + F + +NQG D N V
Sbjct: 647 KTQESYRHQSKSTGDHFISDEEVNKIFQKTFYSNQGKDTKWKKQNTVRNHYKSYNKVNTS 706
Query: 45 ---------LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFD 95
LLVDGYN+ WP+L+ ++ ++ AR KL++ L + +R+ K++VVFD
Sbjct: 707 SKHVAKKDYLLVDGYNIIYAWPELD-ELVEHNMEAARMKLLDILSNYQGMRKYKIIVVFD 765
Query: 96 ALMSGLPTHKEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQH 151
A + ++EE I + +V+ E AD +IEK A + + V TSD L+Q
Sbjct: 766 AYR--VQGNREEIITYNNIHLVYTKEAQTADQYIEK--FASDHNEKYNITVATSDGLEQL 821
Query: 152 AAYGAGAFVWSSKALVSEVSLI 173
G G + S++ L ++ +
Sbjct: 822 IVRGRGCRLLSARELKGDIERV 843
>gi|261409538|ref|YP_003245779.1| hypothetical protein GYMC10_5767 [Paenibacillus sp. Y412MC10]
gi|261286001|gb|ACX67972.1| protein of unknown function DUF901 [Paenibacillus sp. Y412MC10]
Length = 173
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP L + AR L+E+L ++ ++VVV+FDA +P
Sbjct: 8 VLLVDGYNMIGGWPHLAK-LANSSMHEARDLLLEKLADYQAYSGLRVVVIFDAYR--VPG 64
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ + V + F E AD IE+ +V K++V TSD ++QH + GA
Sbjct: 65 LGKSYTQGKVQVFFTKEKETADECIER-LVGEFSHRRRKIYVATSDLIEQHVIFARGALR 123
Query: 161 WSSKALVSEV 170
S++ L+SEV
Sbjct: 124 LSARELLSEV 133
>gi|451817042|ref|YP_007453243.1| putative RNA-binding protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783021|gb|AGF53989.1| putative RNA-binding protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 170
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMS 99
+ + VDGYNV WP L+ + ARQ LI++L + + + K+++VFDA ++
Sbjct: 1 MKTIFVDGYNVINSWPNLK-QTKDFSFEAARQILIDKLHNYGVFKACKIILVFDAHKVIG 59
Query: 100 GLPTHKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
L +E + +VF GET AD +IEK++ L ++ VVTSD L+Q + G
Sbjct: 60 SLEKKEEVNKNISVVFTKDGET-ADNYIEKKVNVLGRK--HEIVVVTSDSLEQQIVFQRG 116
Query: 158 AFVWSSKALVSEV 170
A SS +EV
Sbjct: 117 AVRMSSLEFYNEV 129
>gi|425738227|ref|ZP_18856493.1| hypothetical protein C273_07522 [Staphylococcus massiliensis S46]
gi|425480237|gb|EKU47405.1| hypothetical protein C273_07522 [Staphylococcus massiliensis S46]
Length = 174
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
+++DGYN+ G L + + L AR++LI E+ ++ + + +V+ VFDA
Sbjct: 6 VIIDGYNMMGQSNHL-SALAQEDLSEAREQLIVEISNYNALIKGEVICVFDAYDQEGNMS 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV I++ E AD++IE+ + K+ VVTSD +QHA +G GA+ SS
Sbjct: 65 ESYYHGVKIIYTKENETADSYIERWVYNHYNKHTTKIMVVTSDMSEQHAIFGTGAYRISS 124
Query: 164 KAL 166
+ +
Sbjct: 125 REM 127
>gi|422685646|ref|ZP_16743861.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
gi|315029623|gb|EFT41555.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
Length = 176
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + RL+ AR+ L+ L ++ ++++VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGAWPELVQLKKQERLEDARELLLSRLSNYAKYEGLEIIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
++++ + +VF E AD++IE+ + + D +V V TSD +Q + GA
Sbjct: 65 QTYKKYL-LTVVFTKEDETADSYIER-LAGEKNDRLTQVTVATSDLAEQWVVFSQGALRT 122
Query: 162 SSKALVSEVS 171
S+ L V
Sbjct: 123 SANELYKAVQ 132
>gi|365924275|ref|ZP_09447038.1| hypothetical protein LmalK35_00140 [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|420265687|ref|ZP_14768221.1| hypothetical protein LMA_04226 [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394427438|gb|EJF00137.1| hypothetical protein LMA_04226 [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 178
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YN+ G WP+L + G L+ AR L+ L + R ++VVFDA+ + GL
Sbjct: 5 ILIVDAYNMIGNWPQLNKLKLSGHLEEARDTLLHVLSNYKKQRNYHIIVVFDAMYVPGLS 64
Query: 103 THKEEFIGVDIVFPG-ETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+++ G++I++ E AD++IE L + +V V TSD +Q + GA
Sbjct: 65 KSYQQY-GLEIIWTAEEQTADSYIESLAKKL-QTRLTQVTVATSDQAEQWTIFSQGAL 120
>gi|373122310|ref|ZP_09536174.1| small GTP-binding protein domain protein [Erysipelotrichaceae
bacterium 21_3]
gi|371663758|gb|EHO28943.1| small GTP-binding protein domain protein [Erysipelotrichaceae
bacterium 21_3]
Length = 867
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMSGL- 101
LLVDGYNV W +L+ K LD AR +LI+ + + R ++++VFDA + +G+
Sbjct: 703 LLVDGYNVIHDWEELKA-MAKEHLDAARHRLIDIMCSYQGYRGCELILVFDAYKVKAGIG 761
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+HKE I V +T AD +IE+ L + +V V TSD ++Q A G GA
Sbjct: 762 SSHKEGTIHVVYTKQAQT-ADMYIEQATHQLASEF--RVTVATSDGMEQLIASGQGASRM 818
Query: 162 SSKALVSEV 170
SS+ L +EV
Sbjct: 819 SSRQLYAEV 827
>gi|29374706|ref|NP_813858.1| hypothetical protein EF0048 [Enterococcus faecalis V583]
gi|227555730|ref|ZP_03985777.1| protein of hypothetical function DUF901 [Enterococcus faecalis
HH22]
gi|229547083|ref|ZP_04435808.1| protein of hypothetical function DUF901 [Enterococcus faecalis
TX1322]
gi|229550655|ref|ZP_04439380.1| protein of hypothetical function DUF901 [Enterococcus faecalis ATCC
29200]
gi|255971594|ref|ZP_05422180.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255974566|ref|ZP_05425152.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256618481|ref|ZP_05475327.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256761898|ref|ZP_05502478.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|256855026|ref|ZP_05560387.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256960768|ref|ZP_05564939.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256964028|ref|ZP_05568199.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|257081391|ref|ZP_05575752.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|257084051|ref|ZP_05578412.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|257087880|ref|ZP_05582241.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|257088533|ref|ZP_05582894.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|257417471|ref|ZP_05594465.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257418799|ref|ZP_05595793.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|257421387|ref|ZP_05598377.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|293382263|ref|ZP_06628203.1| hypothetical cytosolic protein [Enterococcus faecalis R712]
gi|293386688|ref|ZP_06631261.1| hypothetical cytosolic protein [Enterococcus faecalis S613]
gi|300862266|ref|ZP_07108346.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|307274060|ref|ZP_07555270.1| hypothetical protein HMPREF9514_02802 [Enterococcus faecalis
TX0855]
gi|307276293|ref|ZP_07557420.1| hypothetical protein HMPREF9521_01919 [Enterococcus faecalis
TX2134]
gi|307284106|ref|ZP_07564276.1| hypothetical protein HMPREF9515_02259 [Enterococcus faecalis
TX0860]
gi|307296638|ref|ZP_07576458.1| hypothetical protein HMPREF9509_03296 [Enterococcus faecalis
TX0411]
gi|312901248|ref|ZP_07760531.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|312903157|ref|ZP_07762338.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|312908759|ref|ZP_07767698.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|312952482|ref|ZP_07771350.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|312979219|ref|ZP_07790923.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|384512011|ref|YP_005707104.1| hypothetical protein OG1RF_10047 [Enterococcus faecalis OG1RF]
gi|384517152|ref|YP_005704457.1| hypothetical protein EF62_0438 [Enterococcus faecalis 62]
gi|397698631|ref|YP_006536419.1| hypothetical protein EFD32_0048 [Enterococcus faecalis D32]
gi|421514005|ref|ZP_15960726.1| hypothetical protein A961_1865 [Enterococcus faecalis ATCC 29212]
gi|422688320|ref|ZP_16746476.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
gi|422691839|ref|ZP_16749868.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|422693539|ref|ZP_16751550.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|422697260|ref|ZP_16755205.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
gi|422700226|ref|ZP_16758080.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|422707470|ref|ZP_16765163.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
gi|422713140|ref|ZP_16769896.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|422717763|ref|ZP_16774437.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|422723272|ref|ZP_16779810.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|422726584|ref|ZP_16783031.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|422728230|ref|ZP_16784648.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
gi|422730612|ref|ZP_16787001.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
gi|422741654|ref|ZP_16795677.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
gi|424671636|ref|ZP_18108630.1| hypothetical protein HMPREF1327_00700 [Enterococcus faecalis 599]
gi|424757611|ref|ZP_18185347.1| hypothetical protein HMPREF1344_00989 [Enterococcus faecalis R508]
gi|428765730|ref|YP_007151841.1| DUF901 family protein [Enterococcus faecalis str. Symbioflor 1]
gi|430361553|ref|ZP_19426713.1| PIN domain containing protein [Enterococcus faecalis OG1X]
gi|430372118|ref|ZP_19429647.1| PIN domain containing protein [Enterococcus faecalis M7]
gi|29342164|gb|AAO79930.1| conserved hypothetical protein [Enterococcus faecalis V583]
gi|227175135|gb|EEI56107.1| protein of hypothetical function DUF901 [Enterococcus faecalis
HH22]
gi|229304221|gb|EEN70217.1| protein of hypothetical function DUF901 [Enterococcus faecalis ATCC
29200]
gi|229307812|gb|EEN73799.1| protein of hypothetical function DUF901 [Enterococcus faecalis
TX1322]
gi|255962612|gb|EET95088.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255967438|gb|EET98060.1| conserved hypothetical protein [Enterococcus faecalis T2]
gi|256598008|gb|EEU17184.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256683149|gb|EEU22844.1| conserved hypothetical protein [Enterococcus faecalis T3]
gi|256709539|gb|EEU24586.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256951264|gb|EEU67896.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
gi|256954524|gb|EEU71156.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
gi|256989421|gb|EEU76723.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
gi|256992081|gb|EEU79383.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
gi|256995910|gb|EEU83212.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|256997345|gb|EEU83865.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|257159299|gb|EEU89259.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
gi|257160627|gb|EEU90587.1| conserved hypothetical protein [Enterococcus faecalis T11]
gi|257163211|gb|EEU93171.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|291080377|gb|EFE17741.1| hypothetical cytosolic protein [Enterococcus faecalis R712]
gi|291083857|gb|EFE20820.1| hypothetical cytosolic protein [Enterococcus faecalis S613]
gi|300848791|gb|EFK76548.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
gi|306495974|gb|EFM65562.1| hypothetical protein HMPREF9509_03296 [Enterococcus faecalis
TX0411]
gi|306503477|gb|EFM72726.1| hypothetical protein HMPREF9515_02259 [Enterococcus faecalis
TX0860]
gi|306507036|gb|EFM76179.1| hypothetical protein HMPREF9521_01919 [Enterococcus faecalis
TX2134]
gi|306509368|gb|EFM78428.1| hypothetical protein HMPREF9514_02802 [Enterococcus faecalis
TX0855]
gi|310625197|gb|EFQ08480.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
gi|310629578|gb|EFQ12861.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
gi|310633548|gb|EFQ16831.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
gi|311287984|gb|EFQ66540.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
gi|311291625|gb|EFQ70181.1| conserved hypothetical protein [Enterococcus faecalis TX0470]
gi|315026625|gb|EFT38557.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
gi|315143636|gb|EFT87652.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
gi|315149009|gb|EFT93025.1| conserved hypothetical protein [Enterococcus faecalis TX4244]
gi|315151337|gb|EFT95353.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
gi|315153504|gb|EFT97520.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
gi|315155075|gb|EFT99091.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
gi|315158518|gb|EFU02535.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
gi|315163381|gb|EFU07398.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
gi|315171293|gb|EFU15310.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
gi|315174136|gb|EFU18153.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
gi|315573946|gb|EFU86137.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
gi|315578628|gb|EFU90819.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
gi|315581897|gb|EFU94088.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
gi|323479285|gb|ADX78724.1| conserved hypothetical protein [Enterococcus faecalis 62]
gi|327533900|gb|AEA92734.1| protein of hypothetical function DUF901 [Enterococcus faecalis
OG1RF]
gi|397335270|gb|AFO42942.1| hypothetical protein EFD32_0048 [Enterococcus faecalis D32]
gi|401672901|gb|EJS79338.1| hypothetical protein A961_1865 [Enterococcus faecalis ATCC 29212]
gi|402358251|gb|EJU92931.1| hypothetical protein HMPREF1327_00700 [Enterococcus faecalis 599]
gi|402406427|gb|EJV38978.1| hypothetical protein HMPREF1344_00989 [Enterococcus faecalis R508]
gi|427183903|emb|CCO71127.1| DUF901 family protein [Enterococcus faecalis str. Symbioflor 1]
gi|429512421|gb|ELA02028.1| PIN domain containing protein [Enterococcus faecalis OG1X]
gi|429514833|gb|ELA04367.1| PIN domain containing protein [Enterococcus faecalis M7]
Length = 176
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + RL+ AR+ L+ L ++ ++++VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGAWPELVQLKKQERLEDARELLLSRLSNYAKYEGLEIIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
++++ + +VF E AD++IE+ + + D +V V TSD +Q + GA
Sbjct: 65 QTYKKYL-LTVVFTKEDETADSYIER-LAGEKNDRLTQVTVATSDLAEQWVVFSQGALRT 122
Query: 162 SSKALVSEVS 171
S+ L V
Sbjct: 123 SANELYKAVQ 132
>gi|15896401|ref|NP_349750.1| hypothetical protein CA_C3153 [Clostridium acetobutylicum ATCC 824]
gi|337738359|ref|YP_004637806.1| hypothetical protein SMB_G3189 [Clostridium acetobutylicum DSM
1731]
gi|384459869|ref|YP_005672289.1| hypothetical protein CEA_G3157 [Clostridium acetobutylicum EA 2018]
gi|15026219|gb|AAK81090.1|AE007810_9 Uncharacterized conserved protein, YACP B.subtilis ortholog
[Clostridium acetobutylicum ATCC 824]
gi|325510558|gb|ADZ22194.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
gi|336292872|gb|AEI34006.1| hypothetical protein SMB_G3189 [Clostridium acetobutylicum DSM
1731]
Length = 172
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 15/140 (10%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +LVDGYNV W KL + L+ AR KLIE LVE+ K++VVFDA +
Sbjct: 1 MKTILVDGYNVINSWGKLNSIKDDVSLESARDKLIEVLVEYGEFTNCKIIVVFDA--HHI 58
Query: 102 PTHKEEFIGV----DIVF--PGETCADAWIEKEI--VALREDGCPKVWVVTSDHLQQHAA 153
P + E I + IV+ GET AD++IE+ + V + + C VVTSD+L+Q
Sbjct: 59 PGNTGEKIKMYDKFTIVYTKAGET-ADSFIERYVNKVGRKSEVC----VVTSDNLEQQVV 113
Query: 154 YGAGAFVWSSKALVSEVSLI 173
+ G+ SS ++V I
Sbjct: 114 FQRGSTRMSSIEFYNDVQKI 133
>gi|313898434|ref|ZP_07831971.1| putative translation elongation factor G [Clostridium sp. HGF2]
gi|312956816|gb|EFR38447.1| putative translation elongation factor G [Clostridium sp. HGF2]
Length = 867
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMSGL- 101
LLVDGYNV W +L+ K LD AR +LI+ + + R ++++VFDA + +G+
Sbjct: 703 LLVDGYNVIHDWEELKA-MAKEHLDAARHRLIDIMCSYQGYRGCELILVFDAYKVKAGIG 761
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+HKE I V +T AD +IE+ L + +V V TSD ++Q A G GA
Sbjct: 762 SSHKEGTIHVVYTKQAQT-ADMYIEQATHQLASEF--RVTVATSDGMEQLIASGQGASRM 818
Query: 162 SSKALVSEV 170
SS+ L +EV
Sbjct: 819 SSRQLYAEV 827
>gi|182419991|ref|ZP_02951225.1| tetracycline resistance protein [Clostridium butyricum 5521]
gi|237666527|ref|ZP_04526512.1| tetracycline resistance protein [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182376028|gb|EDT73615.1| tetracycline resistance protein [Clostridium butyricum 5521]
gi|237657726|gb|EEP55281.1| tetracycline resistance protein [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 170
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 16/134 (11%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDV----ARQKLIEELVEFSMIREVKVVVVFDALMSG 100
+ VDGYNV WP L K + DV ARQ LI++L + + + ++++VFDA
Sbjct: 4 IFVDGYNVINSWPDL-----KEKKDVSFEGARQSLIDKLHNYGVFKACRIILVFDAHKVQ 58
Query: 101 LPTHKEEFIGVDI--VFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGA 156
K+E I +I VF GET ADA+IE+ + + +V VVTSD+L+Q +
Sbjct: 59 GSIEKKEEINKNICVVFTKDGET-ADAYIERHVNEIGRK--HEVVVVTSDNLEQQTVFQR 115
Query: 157 GAFVWSSKALVSEV 170
GA SS +E+
Sbjct: 116 GAVRMSSIEFYNEI 129
>gi|346313429|ref|ZP_08854959.1| hypothetical protein HMPREF9022_00616 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345898342|gb|EGX68223.1| hypothetical protein HMPREF9022_00616 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 867
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMSGL- 101
LLVDGYNV W +L+ K LD AR +LI+ + + R ++++VFDA + +G+
Sbjct: 703 LLVDGYNVIHDWEELKA-MAKEHLDAARHRLIDIMCSYQGYRGCELILVFDAYKVKAGIG 761
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+HKE I V +T AD +IE+ L + +V V TSD ++Q A G GA
Sbjct: 762 SSHKEGTIHVVYTKQAQT-ADMYIEQATHQLASEF--RVTVATSDGMEQLIASGQGASRM 818
Query: 162 SSKALVSEV 170
SS+ L +EV
Sbjct: 819 SSRQLYAEV 827
>gi|422329736|ref|ZP_16410761.1| small GTP-binding protein domain protein [Erysipelotrichaceae
bacterium 6_1_45]
gi|371655959|gb|EHO21295.1| small GTP-binding protein domain protein [Erysipelotrichaceae
bacterium 6_1_45]
Length = 867
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMSGL- 101
LLVDGYNV W +L+ K LD AR +LI+ + + R ++++VFDA + +G+
Sbjct: 703 LLVDGYNVIHDWEELKA-MAKEHLDAARHRLIDIMCSYQGYRGCELILVFDAYKVKAGIG 761
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+HKE I V +T AD +IE+ L + +V V TSD ++Q A G GA
Sbjct: 762 SSHKEGTIHVVYTKQAQT-ADMYIEQATHQLASEF--RVTVATSDGMEQLIASGQGASRM 818
Query: 162 SSKALVSEV 170
SS+ L +EV
Sbjct: 819 SSRQLYAEV 827
>gi|403388296|ref|ZP_10930353.1| RNA-binding protein [Clostridium sp. JC122]
Length = 169
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM-SG 100
+ ++ VDGYNV WP+L+ + + AR+KL++ + +S K+ VVFDA M G
Sbjct: 1 MRIVFVDGYNVINSWPELK-EMKEYSYESAREKLLDIMRNYSAFCGYKIEVVFDAHMVKG 59
Query: 101 LPTHKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
KE+ V +VF GET AD +IEK++ + +V+VVTSD L+Q + GA
Sbjct: 60 AYEKKEKHDKVSVVFTKEGET-ADGYIEKKVNLIGRK--FEVYVVTSDSLEQQVTFQRGA 116
Query: 159 FVWSSKALVSEV 170
SS EV
Sbjct: 117 SRMSSLEFYHEV 128
>gi|205372086|ref|ZP_03224903.1| hypothetical protein Bcoam_01006 [Bacillus coahuilensis m4-4]
Length = 170
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G WP+L+ + L AR L+E L ++ KV+VVFDA
Sbjct: 4 ILLVDGYNMIGAWPELK-RYKNNDLSQARDILVEWLADYQGYTGFKVIVVFDAHFVQGIG 62
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
K VD+++ E AD IEK + L + +V V TSD +Q + GA S
Sbjct: 63 KKYRNYNVDVLYTREKETADERIEKLAIEL-TNIRTEVHVATSDFTEQWVIFAQGALRKS 121
Query: 163 SKALVSEVSLI 173
++ L +E+ LI
Sbjct: 122 ARELHTEIKLI 132
>gi|295112381|emb|CBL31018.1| Predicted RNA-binding protein containing a PIN domain [Enterococcus
sp. 7L76]
Length = 176
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + RL+ AR+ L+ L ++ ++++VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGAWPELVQLKKQERLEDARELLLSRLSNYAKYEGLEIIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
++++ + +VF E AD++IE+ + + D +V V TSD +Q + GA
Sbjct: 65 KTYKKYL-LTVVFTKEDETADSYIER-LAGEKNDRLTQVTVATSDLAEQWVVFSQGALRT 122
Query: 162 SSKALVSEVS 171
S+ L V
Sbjct: 123 SANELYKAVQ 132
>gi|118443709|ref|YP_877181.1| hypothetical protein NT01CX_1097 [Clostridium novyi NT]
gi|118134165|gb|ABK61209.1| conserved hypothetical protein [Clostridium novyi NT]
Length = 168
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
+ VDGYNV WP+L N + + AR KLIE + + K+ +VFDA L+ G
Sbjct: 4 VFVDGYNVINSWPEL-NRIKEYSFEAARDKLIEIMQNYGAYNGYKIFLVFDAHLVKGSIE 62
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
KE + +VF GET AD++IE+ + + +V VVTSD L+Q + GA
Sbjct: 63 KKERMSNLMVVFTKEGET-ADSFIERYVNNIGRK--VEVCVVTSDSLEQQVTFQRGATRM 119
Query: 162 SSKALVSEV 170
SS +EV
Sbjct: 120 SSIEFYNEV 128
>gi|326391115|ref|ZP_08212661.1| protein of unknown function DUF901 [Thermoanaerobacter ethanolicus
JW 200]
gi|392939595|ref|ZP_10305239.1| putative RNA-binding protein containing a PIN domain
[Thermoanaerobacter siderophilus SR4]
gi|325992814|gb|EGD51260.1| protein of unknown function DUF901 [Thermoanaerobacter ethanolicus
JW 200]
gi|392291345|gb|EIV99788.1| putative RNA-binding protein containing a PIN domain
[Thermoanaerobacter siderophilus SR4]
Length = 168
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
+LVDGYNV W L+ K L+ AR KLI+ L +F + +++VFDA+ + G
Sbjct: 5 MLVDGYNVINNWQILKEEAQKN-LEDARDKLIDMLADFKGYSGINIILVFDAMYVKGSLE 63
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EE G+++V+ E AD +IE ++V L + +V VV+SD Q GA S
Sbjct: 64 KHEEINGIEVVYTKEGESADHFIELKVVELAKK--EQVVVVSSDWTVQQVVLAHGAIRMS 121
Query: 163 SKALVSEVS 171
+K L E++
Sbjct: 122 AKELYEEMN 130
>gi|218247685|ref|YP_002373056.1| hypothetical protein PCC8801_2903 [Cyanothece sp. PCC 8801]
gi|257060978|ref|YP_003138866.1| hypothetical protein Cyan8802_3193 [Cyanothece sp. PCC 8802]
gi|218168163|gb|ACK66900.1| protein of unknown function DUF901 [Cyanothece sp. PCC 8801]
gi|256591144|gb|ACV02031.1| protein of unknown function DUF901 [Cyanothece sp. PCC 8802]
Length = 180
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
P+LLVDGYN+ G W L+ + L+ AR++LIE L+ ++ + VVFD+ P
Sbjct: 7 PLLLVDGYNIIGSWASLKKTRDRHGLEPARRELIESLINYTAHNGYETQVVFDSQYRQTP 66
Query: 103 THKEEFI-GVDIVFPG-ETCADAWIEKEIVA-LREDG--CPKVWVVTSDHLQQHAAYGAG 157
+ E++ + I F AD +IEK + R P++ V TSD Q+ G G
Sbjct: 67 SSLEQYSPNLSIYFTAWMQTADTYIEKVCASFFRRTAPPAPRLIVATSDRDQRLTVVGYG 126
Query: 158 AFVWSSKALVSEV 170
A S++ L E+
Sbjct: 127 AEWMSAQRLAHEI 139
>gi|224475681|ref|YP_002633287.1| hypothetical protein Sca_0189 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420288|emb|CAL27102.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 174
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G L H K L+ AR+KL+ + ++ +++ VFDA
Sbjct: 6 LIIDGYNMIGQSDYL-THLAKDSLEEAREKLLLSIGNYNAAVADEIICVFDAYEQEGNES 64
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ G+ VF E AD++IE+ + L + + VVTSD +QHA +G GA+ S
Sbjct: 65 VSYYHGIKTVFTKENETADSYIERLVYDLYDKHTTHIAVVTSDLSEQHAIFGTGAYRIPS 124
Query: 164 KALVSEVSL 172
+ + + L
Sbjct: 125 REMWQNIKL 133
>gi|222152118|ref|YP_002561278.1| hypothetical protein MCCL_1875 [Macrococcus caseolyticus JCSC5402]
gi|222121247|dbj|BAH18582.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 172
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
++DGYNV G L + L+ AR KL+ EL ++ E V+VVFDA + +H+
Sbjct: 7 IIDGYNVIGQSRYLSAIALDS-LEEARVKLLLELANYNARIEDDVIVVFDAY--DVKSHE 63
Query: 106 EE--FIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+E F G+ +++ E ADA IE+ L + + VVTSD +QHA +G+GA
Sbjct: 64 QEEIFHGIRVIYSKENETADAVIERLTFELYKKHITTIKVVTSDMSEQHAIFGSGALRIP 123
Query: 163 SKALVS 168
S+ ++
Sbjct: 124 SREFIA 129
>gi|187932446|ref|YP_001884457.1| tetracycline resistance protein [Clostridium botulinum B str.
Eklund 17B]
gi|187720599|gb|ACD21820.1| tetracycline resistance protein [Clostridium botulinum B str.
Eklund 17B]
Length = 170
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 16/137 (11%)
Query: 42 VPVLLVDGYNVCGYWPKLE----NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL 97
+ ++ VDGYNV WP L+ N+F D AR+ LI+ + + + + KV++VFDA
Sbjct: 1 MKIIFVDGYNVINSWPDLKIKKNNNF-----DGARRSLIDTMHNYGVYNDCKVIIVFDAH 55
Query: 98 MSGLPTHKEEFI--GVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAA 153
K E + + I+F GET AD++IEKE+ L +V VVTSD L+Q
Sbjct: 56 KVPGSIQKLEAVNKNLSIIFTKDGET-ADSYIEKEVNLLGRK--YEVIVVTSDWLEQQTI 112
Query: 154 YGAGAFVWSSKALVSEV 170
+ GA SS +EV
Sbjct: 113 FQRGAVRMSSLEFYNEV 129
>gi|291523550|emb|CBK81843.1| small GTP-binding protein domain [Coprococcus catus GD/7]
Length = 950
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L + + +D AR KL+E L + +V++VFDA + G P
Sbjct: 772 LLVDGYNIIFAWEDL-HELSEHSMDAARNKLMETLSNYQGYTSQRVILVFDAYKVEGFPG 830
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ +D+VF E AD +IEK A+ KV V TSD L+Q G + S
Sbjct: 831 EVTKWHNIDVVFTKEAETADQYIEKTAHAIGRK--YKVTVATSDGLEQVIIRSQGCLLMS 888
Query: 163 SKALVSEVSLI 173
++ L E+ I
Sbjct: 889 ARELRQEIERI 899
>gi|255527270|ref|ZP_05394151.1| protein of unknown function DUF901 [Clostridium carboxidivorans P7]
gi|296187249|ref|ZP_06855645.1| hypothetical protein CLCAR_2730 [Clostridium carboxidivorans P7]
gi|255509055|gb|EET85414.1| protein of unknown function DUF901 [Clostridium carboxidivorans P7]
gi|296048120|gb|EFG87558.1| hypothetical protein CLCAR_2730 [Clostridium carboxidivorans P7]
Length = 170
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 45 LLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+ VDGYNV W +L+ IK + AR +LIE+L ++ + KV +VFDA M
Sbjct: 4 IFVDGYNVINSWSELKK--IKEYSYEAARTELIEKLSNYATYKNYKVFIVFDAHMVIKSI 61
Query: 104 HKEEFIGVDIVF----PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
K+E I +IV GET ADA+IEK + + +V VVTSD L+Q + GA
Sbjct: 62 EKKEKISDNIVVVFTKEGET-ADAFIEKTVNKI--GRKIEVCVVTSDSLEQQVVFQRGAT 118
Query: 160 VWSSKALVSEV 170
SS EV
Sbjct: 119 RMSSVEFYHEV 129
>gi|428201003|ref|YP_007079592.1| putative RNA-binding protein containing a PIN domain [Pleurocapsa
sp. PCC 7327]
gi|427978435|gb|AFY76035.1| putative RNA-binding protein containing a PIN domain [Pleurocapsa
sp. PCC 7327]
Length = 181
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G W L+ + L+ AR++L+E LV ++ +VFD+ P
Sbjct: 8 LLLVDGYNIIGAWSYLKRTRERDGLEAARRELVEALVNYTAHEGWLTKIVFDSHYQKTPG 67
Query: 104 HKEEFI-GVDIVFPG-ETCADAWIEKEIVALRE---DGCPKVWVVTSDHLQQHAAYGAGA 158
+E++ + + + AD +IEK + + ++ V TSD Q+ A G GA
Sbjct: 68 SQEDYTPSLSVYYTAFAQTADTYIEKVCASFKHQDSSSISRLIVATSDRAQRLTAIGYGA 127
Query: 159 FVWSSKALVSEVSLI 173
S++ L SEV L+
Sbjct: 128 EWMSAQRLASEVELV 142
>gi|345018552|ref|YP_004820905.1| hypothetical protein Thewi_2273 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033895|gb|AEM79621.1| protein of unknown function DUF901 [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 168
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
+LVDGYNV W L+ K L+ AR KLI+ L +F + +++VFDA+ + G
Sbjct: 5 MLVDGYNVINNWQILKEKAQKN-LEDARDKLIDMLADFKGYSGINIILVFDAMYVKGSLE 63
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EE G+++V+ E AD +IE ++V L + +V VV+SD Q GA S
Sbjct: 64 KHEEINGIEVVYTKEGESADHFIELKVVELAKK--EQVVVVSSDWTVQQVVLAHGAIRMS 121
Query: 163 SKALVSEVS 171
+K L E++
Sbjct: 122 AKELYEEMN 130
>gi|289422585|ref|ZP_06424428.1| YacP [Peptostreptococcus anaerobius 653-L]
gi|289157157|gb|EFD05779.1| YacP [Peptostreptococcus anaerobius 653-L]
Length = 186
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 41 AVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MS 99
A +L+VDGYNV W L+ + L+ AR KL+ ++E+S I+ + VVFDA +
Sbjct: 15 ARKILIVDGYNVINAWSVLKK-LGEDDLESARNKLVAYVMEYSKIKGYEAHVVFDAYNVK 73
Query: 100 GLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
G+ E V +VF E AD +IEK I L + +V+V TSD+ +Q G G
Sbjct: 74 GVDEKIEHHHDVTVVFTKENQTADTYIEKFISGLSK--YDEVYVATSDYAEQQIILGKGC 131
Query: 159 FVWSSKALVSEVS 171
++ L+ ++S
Sbjct: 132 SRIPARELIGDLS 144
>gi|429766434|ref|ZP_19298700.1| hypothetical protein HMPREF0216_02434 [Clostridium celatum DSM
1785]
gi|429184603|gb|EKY25614.1| hypothetical protein HMPREF0216_02434 [Clostridium celatum DSM
1785]
Length = 170
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMS 99
+ + +DGYNV W L+ H + LD ARQKLI+ L + I K+++VFD +
Sbjct: 1 MKFIFIDGYNVINSWSNLK-HEKEVSLDSARQKLIDILHNYGAIHGCKIMLVFDGYKVAR 59
Query: 100 GLPTHKEEFIGVDIVF--PGETCADAWIEKEI--VALREDGCPKVWVVTSDHLQQHAAYG 155
L + E + +VF GET ADA+IEKEI + R +V VVTSD L+Q +
Sbjct: 60 NLESKYEYNKNLTVVFTKSGET-ADAYIEKEIHNIGRR----FEVSVVTSDSLEQQTIFQ 114
Query: 156 AGA 158
GA
Sbjct: 115 RGA 117
>gi|429727478|ref|ZP_19262246.1| hypothetical protein HMPREF9998_00189 [Peptostreptococcus
anaerobius VPI 4330]
gi|429152247|gb|EKX95078.1| hypothetical protein HMPREF9998_00189 [Peptostreptococcus
anaerobius VPI 4330]
Length = 179
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 41 AVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MS 99
A +L+VDGYNV W L+ + L+ AR KL+ ++E+S I+ + VVFDA +
Sbjct: 8 ARKILIVDGYNVINAWSVLKK-LGEDDLESARNKLVAYVMEYSKIKGYEAHVVFDAYNVK 66
Query: 100 GLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
G+ E V +VF E AD +IEK I L + +V+V TSD+ +Q G G
Sbjct: 67 GVDEKIEHHHDVTVVFTKENQTADTYIEKFISGLSK--YDEVYVATSDYAEQQIILGKGC 124
Query: 159 FVWSSKALVSEVS 171
++ L+ ++S
Sbjct: 125 SRIPARELIGDLS 137
>gi|417002467|ref|ZP_11941850.1| hypothetical protein HMPREF9290_1209 [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479135|gb|EGC82232.1| hypothetical protein HMPREF9290_1209 [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 174
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+ VDGYNV WP L++ K L AR LIEEL E+ + ++V+VFDA L
Sbjct: 8 ITFVDGYNVINKWPNLKD-LSKENLADARDLLIEELAEYKSLSGEELVIVFDAY--NLDR 64
Query: 104 HKEEFI---GVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
KE I G+ IVF AD +IE+++ + D + VVT D Q A G GA
Sbjct: 65 IKETIIEKYGMKIVFTKRFQTADTYIERQLA--KTDRHHNIKVVTDDGAVQTQASGKGAS 122
Query: 160 VWSSKALVSEVSLI 173
++ L S+++ +
Sbjct: 123 RVTALELRSDLNTM 136
>gi|188587970|ref|YP_001919655.1| tetracycline resistance protein [Clostridium botulinum E3 str.
Alaska E43]
gi|251777975|ref|ZP_04820895.1| tetracycline resistance protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|188498251|gb|ACD51387.1| tetracycline resistance protein [Clostridium botulinum E3 str.
Alaska E43]
gi|243082290|gb|EES48180.1| tetracycline resistance protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 170
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 16/137 (11%)
Query: 42 VPVLLVDGYNVCGYWPKLE----NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL 97
+ ++ VDGYNV WP L+ N+F D AR+ LI+ + + + + KV++VFDA
Sbjct: 1 MKIIFVDGYNVINSWPDLKIKKNNNF-----DGARRSLIDTMHNYGVYNDCKVIIVFDAH 55
Query: 98 MSGLPTHKEEFI--GVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAA 153
K E + + I+F GET AD++IEKE+ L +V VVTSD L+Q
Sbjct: 56 KVLGSIQKVEAVNKNLSIIFTKDGET-ADSYIEKEVNLLGRK--YEVIVVTSDWLEQQTI 112
Query: 154 YGAGAFVWSSKALVSEV 170
+ GA SS +EV
Sbjct: 113 FQRGAVRMSSLEFYNEV 129
>gi|315649721|ref|ZP_07902805.1| hypothetical protein PVOR_31244 [Paenibacillus vortex V453]
gi|315274909|gb|EFU38285.1| hypothetical protein PVOR_31244 [Paenibacillus vortex V453]
Length = 172
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP L + AR L+E+L E+ +++V +FDA +P
Sbjct: 7 VLLVDGYNMIGGWPFL-AELANSSMQEARDVLLEKLAEYQAYSGLRIVAIFDAYR--VPG 63
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ +I V + F E AD IE+ +V K++V TSD ++QH + GA
Sbjct: 64 LGKSYIQGKVQVFFTKEKETADECIER-LVGEFSHRRRKIYVATSDLIEQHVIFARGALR 122
Query: 161 WSSKALVSEV 170
S++ L++EV
Sbjct: 123 LSARELLNEV 132
>gi|428217241|ref|YP_007101706.1| hypothetical protein Pse7367_0979 [Pseudanabaena sp. PCC 7367]
gi|427989023|gb|AFY69278.1| protein of unknown function DUF901 [Pseudanabaena sp. PCC 7367]
Length = 182
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
P +LVD YNV G W L+ LD AR++LIE + F+ K +VFDA P
Sbjct: 8 PEMLVDAYNVIGAWLWLKELKNSASLDRARRELIEAMTNFAHFHGYKTTLVFDAYNQATP 67
Query: 103 THKEEFI-GVDIVFPG-ETCADAWIEKEIVALRED---GCPKVWVVTSDHLQQHAAYGAG 157
E+ + + + AD +IEK L +V VVTSD Q G G
Sbjct: 68 AAVEKITKNLKLHYTDYRQTADTFIEKTCARLHRHPLRHLKRVIVVTSDRAQHTVTTGYG 127
Query: 158 AFVWSSKALVSEVSL 172
A S++AL EVS+
Sbjct: 128 AEWMSAEALEQEVSI 142
>gi|256956968|ref|ZP_05561139.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|257078645|ref|ZP_05573006.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|294780006|ref|ZP_06745385.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|307268965|ref|ZP_07550329.1| hypothetical protein HMPREF9498_01095 [Enterococcus faecalis
TX4248]
gi|307287134|ref|ZP_07567205.1| hypothetical protein HMPREF9505_00643 [Enterococcus faecalis
TX0109]
gi|422702774|ref|ZP_16760603.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
gi|422709038|ref|ZP_16766552.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
gi|422719150|ref|ZP_16775798.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
gi|422868293|ref|ZP_16914840.1| hypothetical protein HMPREF9520_01625 [Enterococcus faecalis
TX1467]
gi|256947464|gb|EEU64096.1| conserved hypothetical protein [Enterococcus faecalis DS5]
gi|256986675|gb|EEU73977.1| conserved hypothetical protein [Enterococcus faecalis JH1]
gi|294452900|gb|EFG21323.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
gi|306501732|gb|EFM71023.1| hypothetical protein HMPREF9505_00643 [Enterococcus faecalis
TX0109]
gi|306514773|gb|EFM83324.1| hypothetical protein HMPREF9498_01095 [Enterococcus faecalis
TX4248]
gi|315033509|gb|EFT45441.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
gi|315036332|gb|EFT48264.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
gi|315165680|gb|EFU09697.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
gi|329576212|gb|EGG57730.1| hypothetical protein HMPREF9520_01625 [Enterococcus faecalis
TX1467]
Length = 176
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + RL+ AR+ L+ L + ++++VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGAWPELVQLKKQERLEDARELLLSRLSNYGKYEGLEIIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
++++ + +VF E AD++IE+ + + D +V V TSD +Q + GA
Sbjct: 65 QTYKKYL-LTVVFTKEDETADSYIER-LAGEKNDRLTQVTVATSDLAEQWVVFSQGALRT 122
Query: 162 SSKALVSEVS 171
S+ L V
Sbjct: 123 SANELYKAVQ 132
>gi|291536582|emb|CBL09694.1| small GTP-binding protein domain [Roseburia intestinalis M50/1]
Length = 902
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 36/201 (17%)
Query: 3 RPSTSYRRKKVEKEELPEDTELYRFFSYIYNTNQ---------------GIDNAVP---- 43
+P Y +++ +EE E+ R + YN N+ G VP
Sbjct: 665 QPKQVYMQQQSREEEWIGTDEIDRILNQTYNANKREKSAPGRNVWKRSGGSSANVPPVTR 724
Query: 44 ----------VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVV 93
LLVDGYNV W +L N + +D AR KL++ + ++ +R +++VV
Sbjct: 725 TYTPPLSEKEYLLVDGYNVIFAWDEL-NELARDNVDGARGKLLDIMCDYQGMRGCELIVV 783
Query: 94 FDAL-MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQ 150
FDA + G T ++ + +V+ E AD +IEK E+G +V V TSD L+Q
Sbjct: 784 FDAYRVQGHKTEMYDYHNIHVVYTREAETADQYIEK---FAHENGRKYRVTVATSDGLEQ 840
Query: 151 HAAYGAGAFVWSSKALVSEVS 171
GAG + S++ L E++
Sbjct: 841 IIIRGAGCGLISARELEKEIT 861
>gi|414161196|ref|ZP_11417457.1| hypothetical protein HMPREF9310_01831 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876458|gb|EKS24364.1| hypothetical protein HMPREF9310_01831 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 176
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G+ L + K L+ AR+KL+ + + V+ VFDA
Sbjct: 8 LIIDGYNMIGHSRAL-SELAKENLEEAREKLLLAIGNYKATVADDVICVFDAYEQEGNES 66
Query: 105 KEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ + GV +F E AD++IE+ + L + + VVTSD +QHA +G GA+ SS
Sbjct: 67 EFYYHGVRTIFTKEHETADSFIERFVYGLYDKHTTHIAVVTSDMSEQHAIFGTGAYRISS 126
Query: 164 KALVSEVSL 172
+ + + L
Sbjct: 127 REMWQNIKL 135
>gi|291541087|emb|CBL14198.1| small GTP-binding protein domain [Roseburia intestinalis XB6B4]
Length = 902
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 36/201 (17%)
Query: 3 RPSTSYRRKKVEKEELPEDTELYRFFSYIYNTNQ----------------GIDNAVPV-- 44
+P Y +++ +EE E+ R + YN N+ N PV
Sbjct: 665 QPKQVYMQQQSREEEWIGTDEIDRILNQTYNANKREKSAPGRNVWKRSGGSSTNISPVTR 724
Query: 45 -----------LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVV 93
LLVDGYNV W +L N + +D AR +L++ L ++ +R +++VV
Sbjct: 725 TYTPPLSDKEYLLVDGYNVIFAWDEL-NELARDNVDGARGRLLDILCDYQGMRGCELIVV 783
Query: 94 FDAL-MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQ 150
FDA + G T ++ + +V+ E AD +IEK E+G +V V TSD L+Q
Sbjct: 784 FDAYRVQGHKTEMYDYHNIHVVYTREAETADQYIEK---FAHENGRKYRVTVATSDGLEQ 840
Query: 151 HAAYGAGAFVWSSKALVSEVS 171
GAG + S++ L E++
Sbjct: 841 IIIRGAGCGLISARELEKEIT 861
>gi|379704609|ref|YP_005203068.1| putative RNA-binding protein containing a PIN domain protein
[Streptococcus infantarius subsp. infantarius CJ18]
gi|374681308|gb|AEZ61597.1| putative RNA-binding protein containing a PIN domain protein
[Streptococcus infantarius subsp. infantarius CJ18]
Length = 181
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F RLD AR L+ +L ++ + ++ VFDA + GL
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKTNRLDEARNILLRKLNNYAHFENLDIICVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
+++ + ++F E AD++IE+ L P+ V V TSD +Q + GA
Sbjct: 65 QRYDQY-KIQVIFTEEDETADSYIERTAAEL---NTPRHLVEVATSDLNEQWTVFSQGAL 120
Query: 160 VWSSKALVSEVSLI 173
S++ L V+ +
Sbjct: 121 RVSARELEQRVNTV 134
>gi|254425147|ref|ZP_05038865.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196192636|gb|EDX87600.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 181
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+LLVDGYN+ G W L LD AR++LI L +S ++ + VFDA P
Sbjct: 8 AILLVDGYNIIGSWMDLIQLKNSQGLDAARERLIASLANYSAYQDYETWAVFDAYEQQAP 67
Query: 103 THKE---EFIGVDIVFPGETCADAWIEKEIVALREDG---CPKVWVVTSDHLQQHAAYGA 156
+ + + + V G+T AD++IE+ R D ++ V TSD++ + G
Sbjct: 68 SSQNVVTKHLSVHYTDFGQT-ADSYIERACAKFRNDARKFTKRLIVATSDNVHRQTVVGY 126
Query: 157 GAFVWSSKALVSEVSLI 173
GA S+ L +EV+ +
Sbjct: 127 GAEGISALQLQNEVTRV 143
>gi|67925741|ref|ZP_00519048.1| Protein of unknown function DUF901 [Crocosphaera watsonii WH 8501]
gi|67852417|gb|EAM47869.1| Protein of unknown function DUF901 [Crocosphaera watsonii WH 8501]
Length = 178
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
P+LLVDGYN+ G W L+ + L+ AR +L+E L+ +++ + K VVFD+
Sbjct: 6 TPLLLVDGYNIIGSWSSLKATRDRHGLEQARHELVETLINYTVHKGYKTRVVFDSQYQKT 65
Query: 102 PT---HKEEFIGVDIVFPGETCADAWIEKEIVAL---REDGCPKVWVVTSDHLQQHAAYG 155
P+ H + + + +T AD +IEK A +E ++ V TSD Q A G
Sbjct: 66 PSTIEHHSQHLSICFTAWTQT-ADTYIEKVCAAFFSRQETDHDRIIVATSDRDQYLTAMG 124
Query: 156 AGA 158
GA
Sbjct: 125 YGA 127
>gi|227485586|ref|ZP_03915902.1| tetracycline resistance protein [Anaerococcus lactolyticus ATCC
51172]
gi|227236452|gb|EEI86467.1| tetracycline resistance protein [Anaerococcus lactolyticus ATCC
51172]
Length = 174
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 47 VDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPTHK 105
VDGYNV WPKL + L AR LIE+L E+S + K+V+VFDA + L
Sbjct: 11 VDGYNVINKWPKLR-EATRESLATARDNLIEDLAEYSFLTGEKLVIVFDAYNLDRLKETS 69
Query: 106 EEFIGVDIVFPGE-TCADAWIEKEI--VALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E G+ IVF AD +IE E+ +A R + V VVT D Q+ A GA +
Sbjct: 70 IEKYGMKIVFTKRFQTADTYIEAELSRIARRHN----VKVVTDDGQVQNMALVKGASRMT 125
Query: 163 SKALVSEVSLI 173
+ L +++ ++
Sbjct: 126 ALELKTDLDIL 136
>gi|421769979|ref|ZP_16206683.1| PIN domain containing protein [Lactobacillus rhamnosus LRHMDP2]
gi|411183339|gb|EKS50478.1| PIN domain containing protein [Lactobacillus rhamnosus LRHMDP2]
Length = 179
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+++VDGYNV G WP+L + DVAR +L++ L E+ K++VVFDA+ +P
Sbjct: 5 IMIVDGYNVIGNWPELAKLKAEDHFDVARDRLLDILAEYRSHENAKMIVVFDAMY--VPG 62
Query: 104 HKEEFIGVD--IVFPGET-CADAWIEKEIVALREDGCPKVW--VVTSDHLQQHAAYGAGA 158
+ + D +VF E AD++IE+ +E P V VVTSD +Q + A
Sbjct: 63 IGKSYAKWDLQVVFTKEDETADSYIER---LAQEMNSPLVQLVVVTSDQAEQWTVFSRCA 119
Query: 159 FVWSSKALVSEVS 171
SS+ + EV
Sbjct: 120 LRISSRDFLKEVQ 132
>gi|427414126|ref|ZP_18904316.1| hypothetical protein HMPREF9282_01723 [Veillonella ratti
ACS-216-V-Col6b]
gi|425714502|gb|EKU77505.1| hypothetical protein HMPREF9282_01723 [Veillonella ratti
ACS-216-V-Col6b]
Length = 178
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYNV WP+L+ K L+ AR ++ L + + +V++VFD + P
Sbjct: 5 ILIVDGYNVIFAWPELKK-ISKSSLEHARGRIKHMLQNYGKHKGYRVILVFDGKYAH-PG 62
Query: 104 HKEEFIGVDIV----FPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
EEF+ D + GET AD++IE+ + R + V+V TSD+ +Q G GA
Sbjct: 63 SAEEFMTDDFLEVYTADGET-ADSYIERTVFTFR-NSYANVYVCTSDYAEQSQVLGFGAL 120
Query: 160 VWSSKALVSEV 170
S++ L ++V
Sbjct: 121 RISARELKAQV 131
>gi|293564127|ref|ZP_06678533.1| PIN domain containing protein [Enterococcus faecium E1162]
gi|291604045|gb|EFF33573.1| PIN domain containing protein [Enterococcus faecium E1162]
Length = 141
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + ++ AR+ L+ L ++ ++V+VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGSWPELVQLKKQDKMADAREALLHRLSNYAKYEGMEVIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +++ +D+VF E AD++IE+ I D +V V TSD +Q + GA
Sbjct: 65 QNYKKY-QLDVVFTKEDETADSYIER-IAGQLNDRLTQVTVATSDLAEQWMIFSQGALRT 122
Query: 162 SS 163
S+
Sbjct: 123 SA 124
>gi|430847109|ref|ZP_19464956.1| hypothetical protein OGS_01419 [Enterococcus faecium E1133]
gi|430537782|gb|ELA78097.1| hypothetical protein OGS_01419 [Enterococcus faecium E1133]
Length = 176
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + ++ AR+ L+ L ++ ++V+VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGSWPELVQLKKQDKMADAREALLHRLSNYAKYEGMEVIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +++ +D+VF E AD++IE+ I D +V V TSD +Q + GA
Sbjct: 65 QNYKKY-QLDVVFTKEDETADSYIER-IAGQLNDRLTQVTVATSDLAEQWMIFSQGALRT 122
Query: 162 SS 163
S+
Sbjct: 123 SA 124
>gi|422734958|ref|ZP_16791238.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
gi|315168268|gb|EFU12285.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
Length = 176
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP L + RL+ AR+ L+ L ++ ++++VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGAWPGLVQLKKQERLEDARELLLSRLSNYAKYEGLEIIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
++++ + +VF E AD++IE+ + + D +V V TSD +Q + GA
Sbjct: 65 QTYKKYL-LTVVFTKEDETADSYIER-LAGEKNDRLTQVTVATSDLAEQWVVFSQGALRT 122
Query: 162 SSKALVSEVS 171
S+ L V
Sbjct: 123 SANELYKAVQ 132
>gi|416411355|ref|ZP_11688734.1| Hypothetical protein CWATWH0003_5476 [Crocosphaera watsonii WH
0003]
gi|357260315|gb|EHJ09751.1| Hypothetical protein CWATWH0003_5476 [Crocosphaera watsonii WH
0003]
Length = 178
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
P+LLVDGYN+ G W L+ + L+ AR +L+E L+ +++ + K VVFD+
Sbjct: 6 TPLLLVDGYNIIGSWSSLKATRDRHGLEQARHELVETLINYTVHKGYKTRVVFDSQYQKT 65
Query: 102 PT---HKEEFIGVDIVFPGETCADAWIEKEIVAL---REDGCPKVWVVTSDHLQQHAAYG 155
P+ H + + + +T AD +IEK A +E ++ V TSD Q A G
Sbjct: 66 PSTIEHHSQHLSICFTAWTQT-ADTYIEKVCAAFFSRQETDHDRIIVATSDRDQYLTAMG 124
Query: 156 AGA 158
GA
Sbjct: 125 YGA 127
>gi|334338883|ref|YP_004543863.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334090237|gb|AEG58577.1| protein of unknown function DUF901 [Desulfotomaculum ruminis DSM
2154]
Length = 172
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
+VDGYNV WP E G LD R +LI+ L F+ +V V+FDA +
Sbjct: 8 VVDGYNVIHAWPDFEG-IKAGGLDHCRDRLIDILANFAAFSGARVKVIFDAHLVKSGIEH 66
Query: 106 EEFI-GVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EFI GV++ + GET AD+ IE+ + L + G V+VVTSD +Q +G GAF +
Sbjct: 67 AEFIHGVEVFYTQEGET-ADSLIERLVGDLGKLGT--VYVVTSDWDEQRIIFGRGAFRVT 123
Query: 163 SKALVSEVSLI 173
K ++ I
Sbjct: 124 PKEFREQIVQI 134
>gi|256752505|ref|ZP_05493362.1| protein of unknown function DUF901 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300915247|ref|ZP_07132562.1| protein of unknown function DUF901 [Thermoanaerobacter sp. X561]
gi|307725171|ref|YP_003904922.1| hypothetical protein Thet_2067 [Thermoanaerobacter sp. X513]
gi|320115205|ref|YP_004185364.1| hypothetical protein Thebr_0366 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|256748640|gb|EEU61687.1| protein of unknown function DUF901 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300888971|gb|EFK84118.1| protein of unknown function DUF901 [Thermoanaerobacter sp. X561]
gi|307582232|gb|ADN55631.1| protein of unknown function DUF901 [Thermoanaerobacter sp. X513]
gi|319928296|gb|ADV78981.1| protein of unknown function DUF901 [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 168
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
+LVDGYNV W L+ K L+ AR KLI+ L +F + +++VFDA+ + G
Sbjct: 5 MLVDGYNVINNWQILKEEAQKN-LEDARDKLIDMLADFKGYSGINIILVFDAMYVKGSLE 63
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EE G+++V+ E AD +IE ++V L + +V VV+SD Q GA S
Sbjct: 64 KHEEISGIEVVYTREGESADHFIELKVVELAKK--EQVIVVSSDWTVQQVVLAHGAIRMS 121
Query: 163 SKALVSEVS 171
++ L E++
Sbjct: 122 ARELYEEMN 130
>gi|293553642|ref|ZP_06674266.1| PIN domain containing protein [Enterococcus faecium E1039]
gi|425059227|ref|ZP_18462577.1| hypothetical protein HMPREF1347_02484 [Enterococcus faecium 504]
gi|430821438|ref|ZP_19440047.1| hypothetical protein OG9_04943 [Enterococcus faecium E0045]
gi|430824282|ref|ZP_19442846.1| hypothetical protein OGA_05295 [Enterococcus faecium E0120]
gi|430827147|ref|ZP_19445311.1| hypothetical protein OGC_04851 [Enterococcus faecium E0164]
gi|430829961|ref|ZP_19448030.1| hypothetical protein OGE_05045 [Enterococcus faecium E0269]
gi|430835029|ref|ZP_19453028.1| hypothetical protein OGI_02210 [Enterococcus faecium E0679]
gi|430851287|ref|ZP_19469037.1| hypothetical protein OGU_05172 [Enterococcus faecium E1185]
gi|430867688|ref|ZP_19482586.1| hypothetical protein OI7_05089 [Enterococcus faecium E1574]
gi|430906546|ref|ZP_19484981.1| hypothetical protein OI9_04811 [Enterococcus faecium E1575]
gi|431215123|ref|ZP_19501170.1| hypothetical protein OIK_04623 [Enterococcus faecium E1620]
gi|431239372|ref|ZP_19503675.1| hypothetical protein OIM_04877 [Enterococcus faecium E1622]
gi|431449079|ref|ZP_19513920.1| hypothetical protein OIU_05126 [Enterococcus faecium E1630]
gi|431744787|ref|ZP_19533653.1| hypothetical protein OKC_04990 [Enterococcus faecium E2071]
gi|431747407|ref|ZP_19536201.1| hypothetical protein OKE_05001 [Enterococcus faecium E2134]
gi|431761071|ref|ZP_19549658.1| hypothetical protein OKQ_05211 [Enterococcus faecium E3346]
gi|431766126|ref|ZP_19554622.1| hypothetical protein OKY_04601 [Enterococcus faecium E4215]
gi|291602217|gb|EFF32445.1| PIN domain containing protein [Enterococcus faecium E1039]
gi|403036160|gb|EJY47523.1| hypothetical protein HMPREF1347_02484 [Enterococcus faecium 504]
gi|430438490|gb|ELA48916.1| hypothetical protein OG9_04943 [Enterococcus faecium E0045]
gi|430441297|gb|ELA51412.1| hypothetical protein OGA_05295 [Enterococcus faecium E0120]
gi|430444327|gb|ELA54182.1| hypothetical protein OGC_04851 [Enterococcus faecium E0164]
gi|430479279|gb|ELA56535.1| hypothetical protein OGE_05045 [Enterococcus faecium E0269]
gi|430484697|gb|ELA61659.1| hypothetical protein OGI_02210 [Enterococcus faecium E0679]
gi|430534249|gb|ELA74710.1| hypothetical protein OGU_05172 [Enterococcus faecium E1185]
gi|430550075|gb|ELA89884.1| hypothetical protein OI7_05089 [Enterococcus faecium E1574]
gi|430554504|gb|ELA94106.1| hypothetical protein OI9_04811 [Enterococcus faecium E1575]
gi|430570129|gb|ELB09103.1| hypothetical protein OIK_04623 [Enterococcus faecium E1620]
gi|430571979|gb|ELB10851.1| hypothetical protein OIM_04877 [Enterococcus faecium E1622]
gi|430585471|gb|ELB23756.1| hypothetical protein OIU_05126 [Enterococcus faecium E1630]
gi|430604947|gb|ELB42369.1| hypothetical protein OKC_04990 [Enterococcus faecium E2071]
gi|430606234|gb|ELB43592.1| hypothetical protein OKE_05001 [Enterococcus faecium E2134]
gi|430622445|gb|ELB59166.1| hypothetical protein OKQ_05211 [Enterococcus faecium E3346]
gi|430627196|gb|ELB63713.1| hypothetical protein OKY_04601 [Enterococcus faecium E4215]
Length = 176
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + ++ AR+ L+ L ++ ++V+VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGSWPELVQLKKQDKMADAREALLHRLSNYAKYEGLEVIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +++ +D+VF E AD++IE+ I D +V V TSD +Q + GA
Sbjct: 65 QNYKKY-QLDVVFTKEDETADSYIER-IAGQLNDRLTQVTVATSDLAEQWMIFSQGALRT 122
Query: 162 SS 163
S+
Sbjct: 123 SA 124
>gi|257894124|ref|ZP_05673777.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|289564992|ref|ZP_06445446.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
gi|294614951|ref|ZP_06694842.1| PIN domain containing protein [Enterococcus faecium E1636]
gi|257830503|gb|EEV57110.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
gi|289163199|gb|EFD11045.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
gi|291592237|gb|EFF23855.1| PIN domain containing protein [Enterococcus faecium E1636]
Length = 137
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + ++ AR+ L+ L ++ ++V+VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGSWPELVQLKKQDKMADAREALLHRLSNYAKYEGMEVIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +++ +D+VF E AD++IE+ I D +V V TSD +Q + GA
Sbjct: 65 QNYKKY-QLDVVFTKEDETADSYIER-IAGQLNDRLTQVTVATSDLAEQWMIFSQGALRT 122
Query: 162 SS 163
S+
Sbjct: 123 SA 124
>gi|69245490|ref|ZP_00603454.1| Protein of unknown function DUF901 [Enterococcus faecium DO]
gi|257879806|ref|ZP_05659459.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257882532|ref|ZP_05662185.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257891647|ref|ZP_05671300.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|260559480|ref|ZP_05831661.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|261206631|ref|ZP_05921329.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|294618281|ref|ZP_06697863.1| PIN domain containing protein [Enterococcus faecium E1679]
gi|294623063|ref|ZP_06701950.1| PIN domain containing protein [Enterococcus faecium U0317]
gi|314940060|ref|ZP_07847243.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
gi|314942533|ref|ZP_07849372.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
gi|314949361|ref|ZP_07852702.1| conserved hypothetical protein [Enterococcus faecium TX0082]
gi|314952821|ref|ZP_07855793.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
gi|314993746|ref|ZP_07859091.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
gi|314994811|ref|ZP_07859943.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
gi|383329966|ref|YP_005355850.1| putative RNA-binding protein containing a PIN domain [Enterococcus
faecium Aus0004]
gi|389869782|ref|YP_006377205.1| hypothetical protein HMPREF0351_12599 [Enterococcus faecium DO]
gi|406579441|ref|ZP_11054672.1| putative RNA-binding protein containing a PIN domain [Enterococcus
sp. GMD4E]
gi|406581850|ref|ZP_11056985.1| putative RNA-binding protein containing a PIN domain [Enterococcus
sp. GMD3E]
gi|406585279|ref|ZP_11060272.1| putative RNA-binding protein containing a PIN domain [Enterococcus
sp. GMD2E]
gi|406589839|ref|ZP_11064258.1| putative RNA-binding protein containing a PIN domain [Enterococcus
sp. GMD1E]
gi|410937678|ref|ZP_11369537.1| hypothetical protein GMD5E_A09128 [Enterococcus sp. GMD5E]
gi|415892478|ref|ZP_11549943.1| PIN domain containing protein [Enterococcus faecium E4453]
gi|416132952|ref|ZP_11597978.1| PIN domain containing protein [Enterococcus faecium E4452]
gi|424791468|ref|ZP_18217880.1| hypothetical protein HMPREF1383_01920 [Enterococcus faecium V689]
gi|424797321|ref|ZP_18222919.1| hypothetical protein HMPREF1382_01639 [Enterococcus faecium S447]
gi|424849967|ref|ZP_18274394.1| hypothetical protein HMPREF1381_03154 [Enterococcus faecium R501]
gi|424858130|ref|ZP_18282176.1| hypothetical protein HMPREF1380_02366 [Enterococcus faecium R499]
gi|424866109|ref|ZP_18289959.1| hypothetical protein HMPREF1379_00239 [Enterococcus faecium R497]
gi|424952065|ref|ZP_18367103.1| hypothetical protein HMPREF1378_03101 [Enterococcus faecium R496]
gi|424952355|ref|ZP_18367381.1| hypothetical protein HMPREF1377_00009 [Enterococcus faecium R494]
gi|424955593|ref|ZP_18370421.1| hypothetical protein HMPREF1376_00014 [Enterococcus faecium R446]
gi|424961719|ref|ZP_18376138.1| hypothetical protein HMPREF1375_02493 [Enterococcus faecium P1986]
gi|424964572|ref|ZP_18378650.1| hypothetical protein HMPREF1374_01750 [Enterococcus faecium P1190]
gi|424967539|ref|ZP_18381232.1| hypothetical protein HMPREF1373_01243 [Enterococcus faecium P1140]
gi|424972653|ref|ZP_18385977.1| hypothetical protein HMPREF1372_02931 [Enterococcus faecium P1139]
gi|424975559|ref|ZP_18388711.1| hypothetical protein HMPREF1371_02407 [Enterococcus faecium P1137]
gi|424979373|ref|ZP_18392230.1| hypothetical protein HMPREF1370_03014 [Enterococcus faecium P1123]
gi|424982261|ref|ZP_18394937.1| hypothetical protein HMPREF1369_02447 [Enterococcus faecium ERV99]
gi|424985927|ref|ZP_18398384.1| hypothetical protein HMPREF1368_03002 [Enterococcus faecium ERV69]
gi|424989178|ref|ZP_18401461.1| hypothetical protein HMPREF1367_02895 [Enterococcus faecium ERV38]
gi|424992493|ref|ZP_18404550.1| hypothetical protein HMPREF1366_02755 [Enterococcus faecium ERV26]
gi|424995204|ref|ZP_18407101.1| hypothetical protein HMPREF1365_01964 [Enterococcus faecium ERV168]
gi|424998068|ref|ZP_18409784.1| hypothetical protein HMPREF1364_01455 [Enterococcus faecium ERV165]
gi|425000477|ref|ZP_18412040.1| hypothetical protein HMPREF1363_00625 [Enterococcus faecium ERV161]
gi|425004935|ref|ZP_18416218.1| hypothetical protein HMPREF1362_01844 [Enterococcus faecium ERV102]
gi|425008233|ref|ZP_18419326.1| hypothetical protein HMPREF1361_01856 [Enterococcus faecium ERV1]
gi|425011254|ref|ZP_18422163.1| hypothetical protein HMPREF1360_01623 [Enterococcus faecium E422]
gi|425015204|ref|ZP_18425840.1| hypothetical protein HMPREF1359_02188 [Enterococcus faecium E417]
gi|425017727|ref|ZP_18428223.1| hypothetical protein HMPREF1358_01474 [Enterococcus faecium C621]
gi|425022074|ref|ZP_18432284.1| hypothetical protein HMPREF1357_02463 [Enterococcus faecium C497]
gi|425026405|ref|ZP_18434870.1| hypothetical protein HMPREF1356_02162 [Enterococcus faecium C1904]
gi|425033069|ref|ZP_18438072.1| hypothetical protein HMPREF1355_02340 [Enterococcus faecium 515]
gi|425035948|ref|ZP_18440751.1| hypothetical protein HMPREF1354_01952 [Enterococcus faecium 514]
gi|425039278|ref|ZP_18443832.1| hypothetical protein HMPREF1353_01902 [Enterococcus faecium 513]
gi|425042929|ref|ZP_18447205.1| hypothetical protein HMPREF1352_02253 [Enterococcus faecium 511]
gi|425046853|ref|ZP_18450841.1| hypothetical protein HMPREF1351_02703 [Enterococcus faecium 510]
gi|425049948|ref|ZP_18453728.1| hypothetical protein HMPREF1350_02512 [Enterococcus faecium 509]
gi|425053600|ref|ZP_18457134.1| hypothetical protein HMPREF1349_02730 [Enterococcus faecium 506]
gi|425061181|ref|ZP_18464441.1| hypothetical protein HMPREF1346_01555 [Enterococcus faecium 503]
gi|427397714|ref|ZP_18890196.1| hypothetical protein HMPREF9307_02372 [Enterococcus durans
FB129-CNAB-4]
gi|430832522|ref|ZP_19450565.1| hypothetical protein OGG_05102 [Enterococcus faecium E0333]
gi|430837207|ref|ZP_19455182.1| hypothetical protein OGK_04864 [Enterococcus faecium E0680]
gi|430839994|ref|ZP_19457929.1| hypothetical protein OGM_02429 [Enterococcus faecium E0688]
gi|430845317|ref|ZP_19463211.1| hypothetical protein OGQ_02573 [Enterococcus faecium E1050]
gi|430856316|ref|ZP_19474013.1| hypothetical protein OI1_04877 [Enterococcus faecium E1392]
gi|430859160|ref|ZP_19476776.1| hypothetical protein OI3_04238 [Enterococcus faecium E1552]
gi|430861073|ref|ZP_19478665.1| hypothetical protein OI5_03864 [Enterococcus faecium E1573]
gi|430964206|ref|ZP_19487654.1| hypothetical protein OIA_04751 [Enterococcus faecium E1576]
gi|431014765|ref|ZP_19490307.1| hypothetical protein OIC_04918 [Enterococcus faecium E1578]
gi|431265393|ref|ZP_19506095.1| hypothetical protein OIO_05253 [Enterococcus faecium E1623]
gi|431312170|ref|ZP_19508820.1| hypothetical protein OIQ_05363 [Enterococcus faecium E1626]
gi|431387216|ref|ZP_19511579.1| hypothetical protein OIS_04964 [Enterococcus faecium E1627]
gi|431510867|ref|ZP_19515883.1| hypothetical protein OIW_03915 [Enterococcus faecium E1634]
gi|431561026|ref|ZP_19519658.1| hypothetical protein OK3_05566 [Enterococcus faecium E1731]
gi|431668749|ref|ZP_19524111.1| hypothetical protein OK7_04748 [Enterococcus faecium E1904]
gi|431749906|ref|ZP_19538636.1| hypothetical protein OKG_02082 [Enterococcus faecium E2297]
gi|431756155|ref|ZP_19544793.1| hypothetical protein OKK_05198 [Enterococcus faecium E2883]
gi|431768586|ref|ZP_19557021.1| hypothetical protein OM1_04633 [Enterococcus faecium E1321]
gi|431771776|ref|ZP_19560153.1| hypothetical protein OM3_05583 [Enterococcus faecium E1644]
gi|431774707|ref|ZP_19563012.1| hypothetical protein OM5_02472 [Enterococcus faecium E2369]
gi|431777707|ref|ZP_19565958.1| hypothetical protein OM7_05543 [Enterococcus faecium E2560]
gi|431780403|ref|ZP_19568582.1| hypothetical protein OM9_02218 [Enterococcus faecium E4389]
gi|431783195|ref|ZP_19571317.1| hypothetical protein OMA_05198 [Enterococcus faecium E6012]
gi|431784151|ref|ZP_19572196.1| hypothetical protein OMC_03043 [Enterococcus faecium E6045]
gi|447913855|ref|YP_007395267.1| hypothetical protein M7W_2612 [Enterococcus faecium NRRL B-2354]
gi|68195741|gb|EAN10178.1| Protein of unknown function DUF901 [Enterococcus faecium DO]
gi|257814034|gb|EEV42792.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
gi|257818190|gb|EEV45518.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
gi|257828007|gb|EEV54633.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
gi|260074579|gb|EEW62900.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|260079124|gb|EEW66817.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|291595497|gb|EFF26808.1| PIN domain containing protein [Enterococcus faecium E1679]
gi|291597536|gb|EFF28700.1| PIN domain containing protein [Enterococcus faecium U0317]
gi|313590995|gb|EFR69840.1| conserved hypothetical protein [Enterococcus faecium TX0133a01]
gi|313591846|gb|EFR70691.1| conserved hypothetical protein [Enterococcus faecium TX0133B]
gi|313595055|gb|EFR73900.1| conserved hypothetical protein [Enterococcus faecium TX0133A]
gi|313598754|gb|EFR77599.1| conserved hypothetical protein [Enterococcus faecium TX0133C]
gi|313640660|gb|EFS05240.1| conserved hypothetical protein [Enterococcus faecium TX0133a04]
gi|313644192|gb|EFS08772.1| conserved hypothetical protein [Enterococcus faecium TX0082]
gi|364093177|gb|EHM35476.1| PIN domain containing protein [Enterococcus faecium E4452]
gi|364093307|gb|EHM35589.1| PIN domain containing protein [Enterococcus faecium E4453]
gi|378939660|gb|AFC64732.1| putative RNA-binding protein containing a PIN domain [Enterococcus
faecium Aus0004]
gi|388535031|gb|AFK60223.1| protein of hypothetical function DUF901 [Enterococcus faecium DO]
gi|402916317|gb|EJX37199.1| hypothetical protein HMPREF1381_03154 [Enterococcus faecium R501]
gi|402919233|gb|EJX39851.1| hypothetical protein HMPREF1383_01920 [Enterococcus faecium V689]
gi|402921285|gb|EJX41741.1| hypothetical protein HMPREF1382_01639 [Enterococcus faecium S447]
gi|402927201|gb|EJX47181.1| hypothetical protein HMPREF1380_02366 [Enterococcus faecium R499]
gi|402927781|gb|EJX47711.1| hypothetical protein HMPREF1378_03101 [Enterococcus faecium R496]
gi|402939070|gb|EJX58024.1| hypothetical protein HMPREF1379_00239 [Enterococcus faecium R497]
gi|402941469|gb|EJX60195.1| hypothetical protein HMPREF1377_00009 [Enterococcus faecium R494]
gi|402942621|gb|EJX61190.1| hypothetical protein HMPREF1375_02493 [Enterococcus faecium P1986]
gi|402946286|gb|EJX64569.1| hypothetical protein HMPREF1374_01750 [Enterococcus faecium P1190]
gi|402948329|gb|EJX66477.1| hypothetical protein HMPREF1376_00014 [Enterococcus faecium R446]
gi|402953212|gb|EJX70946.1| hypothetical protein HMPREF1371_02407 [Enterococcus faecium P1137]
gi|402953283|gb|EJX71016.1| hypothetical protein HMPREF1372_02931 [Enterococcus faecium P1139]
gi|402954168|gb|EJX71812.1| hypothetical protein HMPREF1373_01243 [Enterococcus faecium P1140]
gi|402958395|gb|EJX75709.1| hypothetical protein HMPREF1370_03014 [Enterococcus faecium P1123]
gi|402961502|gb|EJX78529.1| hypothetical protein HMPREF1369_02447 [Enterococcus faecium ERV99]
gi|402964888|gb|EJX81639.1| hypothetical protein HMPREF1368_03002 [Enterococcus faecium ERV69]
gi|402969690|gb|EJX86083.1| hypothetical protein HMPREF1367_02895 [Enterococcus faecium ERV38]
gi|402973139|gb|EJX89285.1| hypothetical protein HMPREF1366_02755 [Enterococcus faecium ERV26]
gi|402977974|gb|EJX93742.1| hypothetical protein HMPREF1365_01964 [Enterococcus faecium ERV168]
gi|402984313|gb|EJX99631.1| hypothetical protein HMPREF1364_01455 [Enterococcus faecium ERV165]
gi|402988123|gb|EJY03145.1| hypothetical protein HMPREF1362_01844 [Enterococcus faecium ERV102]
gi|402989113|gb|EJY04066.1| hypothetical protein HMPREF1363_00625 [Enterococcus faecium ERV161]
gi|402993072|gb|EJY07718.1| hypothetical protein HMPREF1361_01856 [Enterococcus faecium ERV1]
gi|402996422|gb|EJY10805.1| hypothetical protein HMPREF1359_02188 [Enterococcus faecium E417]
gi|402997573|gb|EJY11890.1| hypothetical protein HMPREF1360_01623 [Enterococcus faecium E422]
gi|403003789|gb|EJY17645.1| hypothetical protein HMPREF1358_01474 [Enterococcus faecium C621]
gi|403004399|gb|EJY18213.1| hypothetical protein HMPREF1357_02463 [Enterococcus faecium C497]
gi|403005630|gb|EJY19321.1| hypothetical protein HMPREF1356_02162 [Enterococcus faecium C1904]
gi|403011397|gb|EJY24709.1| hypothetical protein HMPREF1355_02340 [Enterococcus faecium 515]
gi|403016379|gb|EJY29201.1| hypothetical protein HMPREF1354_01952 [Enterococcus faecium 514]
gi|403016687|gb|EJY29491.1| hypothetical protein HMPREF1353_01902 [Enterococcus faecium 513]
gi|403021729|gb|EJY34159.1| hypothetical protein HMPREF1352_02253 [Enterococcus faecium 511]
gi|403023078|gb|EJY35368.1| hypothetical protein HMPREF1351_02703 [Enterococcus faecium 510]
gi|403025020|gb|EJY37131.1| hypothetical protein HMPREF1350_02512 [Enterococcus faecium 509]
gi|403029553|gb|EJY41303.1| hypothetical protein HMPREF1349_02730 [Enterococcus faecium 506]
gi|403041882|gb|EJY52863.1| hypothetical protein HMPREF1346_01555 [Enterococcus faecium 503]
gi|404455477|gb|EKA02324.1| putative RNA-binding protein containing a PIN domain [Enterococcus
sp. GMD4E]
gi|404459038|gb|EKA05411.1| putative RNA-binding protein containing a PIN domain [Enterococcus
sp. GMD3E]
gi|404462922|gb|EKA08626.1| putative RNA-binding protein containing a PIN domain [Enterococcus
sp. GMD2E]
gi|404470240|gb|EKA14893.1| putative RNA-binding protein containing a PIN domain [Enterococcus
sp. GMD1E]
gi|410733811|gb|EKQ75733.1| hypothetical protein GMD5E_A09128 [Enterococcus sp. GMD5E]
gi|425722025|gb|EKU84925.1| hypothetical protein HMPREF9307_02372 [Enterococcus durans
FB129-CNAB-4]
gi|430479808|gb|ELA57018.1| hypothetical protein OGG_05102 [Enterococcus faecium E0333]
gi|430487637|gb|ELA64357.1| hypothetical protein OGK_04864 [Enterococcus faecium E0680]
gi|430490102|gb|ELA66647.1| hypothetical protein OGM_02429 [Enterococcus faecium E0688]
gi|430495722|gb|ELA71858.1| hypothetical protein OGQ_02573 [Enterococcus faecium E1050]
gi|430544248|gb|ELA84288.1| hypothetical protein OI3_04238 [Enterococcus faecium E1552]
gi|430545006|gb|ELA85008.1| hypothetical protein OI1_04877 [Enterococcus faecium E1392]
gi|430550662|gb|ELA90445.1| hypothetical protein OI5_03864 [Enterococcus faecium E1573]
gi|430555267|gb|ELA94811.1| hypothetical protein OIA_04751 [Enterococcus faecium E1576]
gi|430559589|gb|ELA98937.1| hypothetical protein OIC_04918 [Enterococcus faecium E1578]
gi|430576228|gb|ELB14897.1| hypothetical protein OIO_05253 [Enterococcus faecium E1623]
gi|430579119|gb|ELB17655.1| hypothetical protein OIQ_05363 [Enterococcus faecium E1626]
gi|430580773|gb|ELB19239.1| hypothetical protein OIS_04964 [Enterococcus faecium E1627]
gi|430586735|gb|ELB24986.1| hypothetical protein OIW_03915 [Enterococcus faecium E1634]
gi|430589867|gb|ELB27967.1| hypothetical protein OK3_05566 [Enterococcus faecium E1731]
gi|430599915|gb|ELB37597.1| hypothetical protein OK7_04748 [Enterococcus faecium E1904]
gi|430610857|gb|ELB47987.1| hypothetical protein OKG_02082 [Enterococcus faecium E2297]
gi|430615610|gb|ELB52554.1| hypothetical protein OKK_05198 [Enterococcus faecium E2883]
gi|430629005|gb|ELB65427.1| hypothetical protein OM1_04633 [Enterococcus faecium E1321]
gi|430632766|gb|ELB68967.1| hypothetical protein OM3_05583 [Enterococcus faecium E1644]
gi|430633592|gb|ELB69747.1| hypothetical protein OM5_02472 [Enterococcus faecium E2369]
gi|430639000|gb|ELB74891.1| hypothetical protein OM7_05543 [Enterococcus faecium E2560]
gi|430639815|gb|ELB75670.1| hypothetical protein OM9_02218 [Enterococcus faecium E4389]
gi|430645868|gb|ELB81370.1| hypothetical protein OMA_05198 [Enterococcus faecium E6012]
gi|430650192|gb|ELB85546.1| hypothetical protein OMC_03043 [Enterococcus faecium E6045]
gi|445189564|gb|AGE31206.1| hypothetical protein M7W_2612 [Enterococcus faecium NRRL B-2354]
Length = 176
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + ++ AR+ L+ L ++ ++V+VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGSWPELVQLKKQDKMADAREALLHRLSNYAKYEGMEVIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +++ +D+VF E AD++IE+ I D +V V TSD +Q + GA
Sbjct: 65 QNYKKY-QLDVVFTKEDETADSYIER-IAGQLNDRLTQVTVATSDLAEQWMIFSQGALRT 122
Query: 162 SS 163
S+
Sbjct: 123 SA 124
>gi|347531475|ref|YP_004838238.1| small GTP-binding protein [Roseburia hominis A2-183]
gi|345501623|gb|AEN96306.1| small GTP-binding protein [Roseburia hominis A2-183]
Length = 886
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 5/134 (3%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL- 97
D V LLVDGYNV W +L + +D AR +L++ L + IR +++VVFDA
Sbjct: 717 DAGVEYLLVDGYNVIFAWQELAE-LARVNMDSARGRLLDILCNYQGIRRCELIVVFDAYR 775
Query: 98 MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGA 156
+ G T ++ + +V+ E ADA+IE+ A +V V TSD L+Q GA
Sbjct: 776 VEGHQTEACDYHNIHVVYTKEAETADAYIER--FAHEHASRYRVTVATSDGLEQIIIRGA 833
Query: 157 GAFVWSSKALVSEV 170
G + S++ EV
Sbjct: 834 GCILLSAREFEQEV 847
>gi|293570063|ref|ZP_06681143.1| PIN domain containing protein [Enterococcus faecium E1071]
gi|291587435|gb|EFF19319.1| PIN domain containing protein [Enterococcus faecium E1071]
Length = 137
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + ++ AR+ L+ L ++ ++V+VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGSWPELVQLKKQDKMADAREALLHRLSNYAKYEGMEVIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +++ +D+VF E AD++IE+ I D +V V TSD +Q + GA
Sbjct: 65 QNYKKY-QLDVVFTKEDETADSYIER-IAGQLNDRLTQVTVATSDLAEQWMIFSQGALRT 122
Query: 162 SS 163
S+
Sbjct: 123 SA 124
>gi|289579163|ref|YP_003477790.1| hypothetical protein Thit_1993 [Thermoanaerobacter italicus Ab9]
gi|289528876|gb|ADD03228.1| protein of unknown function DUF901 [Thermoanaerobacter italicus
Ab9]
Length = 166
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
+LVDGYNV W L+ K L+ AR KLI+ L +F + +++VFDA+ + G
Sbjct: 3 MLVDGYNVINNWQILKREAQKS-LEDARDKLIDILADFKGYSGINIILVFDAMYVKGSLE 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EE G+++V+ E AD +IE ++V L + +V VV+SD Q GA S
Sbjct: 62 KHEEISGIEVVYTKEGESADHFIELKVVELAKK--ERVIVVSSDWTVQQVVLAHGAIRMS 119
Query: 163 SKALVSEVS 171
++ L E++
Sbjct: 120 ARELYEEMN 128
>gi|335356901|ref|ZP_08548771.1| hypothetical protein LaniK3_02723 [Lactobacillus animalis KCTC
3501]
Length = 173
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YN+ G+WP+LE RL+ AR KL+ L ++ +++VVFDA+ + GL
Sbjct: 5 ILIVDAYNMIGHWPELEKLKKADRLEEARDKLLYILSDYYKQSNAEIIVVFDAMYVPGLS 64
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
E++ G+ +V+ E AD++IE L + +V V TSD +Q + GA
Sbjct: 65 KSYEQY-GIQVVWTDEGQTADSYIEALAKKL-QTRLTQVEVATSDGAEQWTVFSQGAL 120
>gi|257886069|ref|ZP_05665722.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|257821925|gb|EEV49055.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
Length = 137
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + ++ AR+ L+ L ++ ++V+VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGSWPELVQLKKQDKMADAREALLHRLSNYAKYEGLEVIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +++ +D+VF E AD++IE+ I D +V V TSD +Q + GA
Sbjct: 65 QNYKKY-QLDVVFTKEDETADSYIER-IAGQLNDRLTQVTVATSDLAEQWMIFSQGALRT 122
Query: 162 SS 163
S+
Sbjct: 123 SA 124
>gi|167036783|ref|YP_001664361.1| hypothetical protein Teth39_0356 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039503|ref|YP_001662488.1| hypothetical protein Teth514_0849 [Thermoanaerobacter sp. X514]
gi|166853743|gb|ABY92152.1| protein of unknown function DUF901 [Thermoanaerobacter sp. X514]
gi|166855617|gb|ABY94025.1| protein of unknown function DUF901 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
Length = 164
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
+LVDGYNV W L+ K L+ AR KLI+ L +F + +++VFDA+ + G
Sbjct: 1 MLVDGYNVINNWQILKEEAQKN-LEDARDKLIDMLADFKGYSGINIILVFDAMYVKGSLE 59
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EE G+++V+ E AD +IE ++V L + +V VV+SD Q GA S
Sbjct: 60 KHEEISGIEVVYTREGESADHFIELKVVELAKK--EQVIVVSSDWTVQQVVLAHGAIRMS 117
Query: 163 SKALVSEVS 171
++ L E++
Sbjct: 118 ARELYEEMN 126
>gi|312898323|ref|ZP_07757713.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
gi|310620242|gb|EFQ03812.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
Length = 174
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
++DGYN+ W L+ L+ ARQ+LI+ + + I+ V+ V+VFDA+ + K
Sbjct: 6 IIDGYNIIFAWKDLQA-LADESLEHARQRLIDTIAGYGKIKGVEAVIVFDAMYTDEGA-K 63
Query: 106 EEFIGVD--IVFPG-ETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EE +G D IVF + AD+ IE+ + R + ++V TSD +Q G+GA+ S
Sbjct: 64 EESVGKDCRIVFTDKDETADSRIERLVYEHRRE-RRSLFVATSDGTEQQQILGSGAYRVS 122
Query: 163 SKALVSEVSLI 173
++ L +V+ +
Sbjct: 123 ARELAEDVARM 133
>gi|297545333|ref|YP_003677635.1| hypothetical protein Tmath_1937 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843108|gb|ADH61624.1| protein of unknown function DUF901 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 166
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
+LVDGYNV W L+ K L+ AR KLI+ L +F + +++VFDA+ + G
Sbjct: 3 MLVDGYNVINNWQILKKEAQKS-LEDARDKLIDILADFRGYSGINIILVFDAMYVKGSLE 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EE G+++V+ E AD +IE ++V L + +V VV+SD Q GA S
Sbjct: 62 KHEEISGIEVVYTKEGESADHFIELKVVELAKK--ERVIVVSSDWTVQQVVLAHGAIRMS 119
Query: 163 SKALVSEVS 171
++ L E++
Sbjct: 120 ARELYEEMN 128
>gi|427420184|ref|ZP_18910367.1| putative RNA-binding protein containing a PIN domain [Leptolyngbya
sp. PCC 7375]
gi|425762897|gb|EKV03750.1| putative RNA-binding protein containing a PIN domain [Leptolyngbya
sp. PCC 7375]
Length = 183
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 43 PVLLVDGYNVCGYWPKL-ENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L E +G L VAR L E L +S R + ++VFDA
Sbjct: 8 AILLVDGYNVIGAWPELTELRDFQG-LGVARTSLAETLANYSAYRGFETLLVFDAYGQRQ 66
Query: 102 PTHKEEF---IGVDIVFPGETCADAWIEKEIVALREDGC---PKVWVVTSDHLQQHAAYG 155
E+F + + G+T AD++IE R+D ++ V TSD QQ G
Sbjct: 67 SHRIEKFTQHLAIHYTSFGQT-ADSYIEISCAKFRDDIRKFEKRLIVATSDRAQQLTVVG 125
Query: 156 AGAFVWSSKALVSEVSLII 174
GA S+ L ++V L +
Sbjct: 126 YGAEWMSAAQLNADVDLSV 144
>gi|227552718|ref|ZP_03982767.1| protein of hypothetical function DUF901 [Enterococcus faecium
TX1330]
gi|257888686|ref|ZP_05668339.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257897356|ref|ZP_05677009.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257899918|ref|ZP_05679571.1| conserved hypothetical protein [Enterococcus faecium Com15]
gi|293378882|ref|ZP_06625037.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
gi|293572685|ref|ZP_06683653.1| PIN domain containing protein [Enterococcus faecium E980]
gi|424762692|ref|ZP_18190192.1| hypothetical protein HMPREF1345_00491 [Enterococcus faecalis
TX1337RF]
gi|425055093|ref|ZP_18458584.1| hypothetical protein HMPREF1348_01132 [Enterococcus faecium 505]
gi|430842655|ref|ZP_19460567.1| hypothetical protein OGO_02350 [Enterococcus faecium E1007]
gi|431043160|ref|ZP_19492959.1| hypothetical protein OIE_05649 [Enterococcus faecium E1590]
gi|431083386|ref|ZP_19495957.1| hypothetical protein OIG_05386 [Enterococcus faecium E1604]
gi|431116622|ref|ZP_19497888.1| hypothetical protein OII_04590 [Enterococcus faecium E1613]
gi|431600967|ref|ZP_19522452.1| hypothetical protein OK5_05321 [Enterococcus faecium E1861]
gi|431739232|ref|ZP_19528170.1| hypothetical protein OK9_05390 [Enterococcus faecium E1972]
gi|431742305|ref|ZP_19531199.1| hypothetical protein OKA_05624 [Enterococcus faecium E2039]
gi|431753326|ref|ZP_19542000.1| hypothetical protein OKI_05242 [Enterococcus faecium E2620]
gi|431758678|ref|ZP_19547303.1| hypothetical protein OKO_02479 [Enterococcus faecium E3083]
gi|431763442|ref|ZP_19551992.1| hypothetical protein OKS_04582 [Enterococcus faecium E3548]
gi|227178118|gb|EEI59090.1| protein of hypothetical function DUF901 [Enterococcus faecium
TX1330]
gi|257824740|gb|EEV51672.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257833921|gb|EEV60342.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257837830|gb|EEV62904.1| conserved hypothetical protein [Enterococcus faecium Com15]
gi|291607271|gb|EFF36625.1| PIN domain containing protein [Enterococcus faecium E980]
gi|292642423|gb|EFF60578.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
gi|402424263|gb|EJV56450.1| hypothetical protein HMPREF1345_00491 [Enterococcus faecium
TX1337RF]
gi|403034590|gb|EJY46027.1| hypothetical protein HMPREF1348_01132 [Enterococcus faecium 505]
gi|430492879|gb|ELA69220.1| hypothetical protein OGO_02350 [Enterococcus faecium E1007]
gi|430561604|gb|ELB00867.1| hypothetical protein OIE_05649 [Enterococcus faecium E1590]
gi|430565207|gb|ELB04376.1| hypothetical protein OIG_05386 [Enterococcus faecium E1604]
gi|430568402|gb|ELB07449.1| hypothetical protein OII_04590 [Enterococcus faecium E1613]
gi|430590124|gb|ELB28209.1| hypothetical protein OK5_05321 [Enterococcus faecium E1861]
gi|430596209|gb|ELB34052.1| hypothetical protein OK9_05390 [Enterococcus faecium E1972]
gi|430600307|gb|ELB37960.1| hypothetical protein OKA_05624 [Enterococcus faecium E2039]
gi|430612233|gb|ELB49284.1| hypothetical protein OKI_05242 [Enterococcus faecium E2620]
gi|430617046|gb|ELB53932.1| hypothetical protein OKO_02479 [Enterococcus faecium E3083]
gi|430622215|gb|ELB58952.1| hypothetical protein OKS_04582 [Enterococcus faecium E3548]
Length = 176
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + ++ AR+ L+ L ++ ++V+VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGSWPELVQLKKQDKMADAREALLHRLSNYAKYEGLEVIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ ++ +D+VF E AD++IE+ I D +V V TSD +Q + GA
Sbjct: 65 QNYRKY-QLDVVFTKEDETADSYIER-IAGQLNDRLTQVTVATSDLAEQWMIFSQGALRT 122
Query: 162 SS 163
S+
Sbjct: 123 SA 124
>gi|171778432|ref|ZP_02919590.1| hypothetical protein STRINF_00441 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282833|gb|EDT48257.1| hypothetical protein STRINF_00441 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 170
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F RLD AR L+ +L ++ + ++ VFDA + GL
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKTNRLDEARNILLRKLNNYAHFENLDIICVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
+++ + ++F E AD++IE+ L P+ V V TSD +Q + GA
Sbjct: 65 QRYDQY-KIQVIFTEEDETADSYIERTAAEL---NTPRHLVEVATSDLNEQWTVFSQGAL 120
Query: 160 VWSSKALVSEVSLI 173
S++ L V+ +
Sbjct: 121 RVSARELEQRVNTV 134
>gi|295694817|ref|YP_003588055.1| hypothetical protein [Kyrpidia tusciae DSM 2912]
gi|295410419|gb|ADG04911.1| protein of unknown function DUF901 [Kyrpidia tusciae DSM 2912]
Length = 169
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
V++VDGYNV G P+L ++ ++ AR +L++ L E+ V+ VFD +
Sbjct: 4 VVIVDGYNVIGTSPELAALKVES-MEEARARLLQWLGEYGAYTGRTVIAVFDGRCAPERR 62
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ GV++ F G+ AD WIE+ + + +++V TSD L+Q ++G G S
Sbjct: 63 GPDRVNGVEVYFTGDDQTADQWIERVVRERVGNRNARIFVATSDELEQSLSFGWGGLRIS 122
Query: 163 SKALVSEV 170
S+ + E+
Sbjct: 123 SREFLDEL 130
>gi|374709178|ref|ZP_09713612.1| YacP [Sporolactobacillus inulinus CASD]
Length = 168
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYNV G W +L+ K + AR LI++L E+ + +V+++FDA L+ G
Sbjct: 4 ILIVDGYNVIGAWTELK-QIQKDDFECARDMLIDKLSEYQSVTGWQVILIFDAYLLPGKE 62
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
T K + +DI++ ++ AD IE I L ++ ++ V TSD +Q A + GA
Sbjct: 63 T-KTKKSKIDIIYTKKSEKADQKIEGLIKKL-QNVKTRIHVATSDMAEQWAVFSQGALRK 120
Query: 162 SSKALVSEVSLI 173
S+ L+ E+ I
Sbjct: 121 PSRELIEEIRQI 132
>gi|442805429|ref|YP_007373578.1| tetracycline resistance protein TetP [Clostridium stercorarium
subsp. stercorarium DSM 8532]
gi|442741279|gb|AGC68968.1| tetracycline resistance protein TetP [Clostridium stercorarium
subsp. stercorarium DSM 8532]
Length = 884
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL- 97
+N LLVDGYN+ WP+L+ K +D A+ +L++ L ++ + + +V+VVFDA
Sbjct: 711 ENKEKYLLVDGYNIIFAWPELK-EMAKENMDAAKSRLLDWLSKYKSVEDCEVIVVFDAYR 769
Query: 98 MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAY 154
+ G P E+ + +V+ E AD +IEK D K + V TSD LQQ
Sbjct: 770 VQGHPEEFLEYGNIYVVYTKEAQTADQYIEK----FAHDNSEKFDITVATSDGLQQVIIR 825
Query: 155 GAGAFVWSSKALVSEVSL 172
G G + S+ L +V
Sbjct: 826 GEGCALMSASELREKVKF 843
>gi|357239245|ref|ZP_09126580.1| hypothetical protein STRIC_1915 [Streptococcus ictaluri 707-05]
gi|356751814|gb|EHI68944.1| hypothetical protein STRIC_1915 [Streptococcus ictaluri 707-05]
Length = 170
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F RLD AR+ L+ +L ++ +++ VFDA + GL
Sbjct: 5 LLLVDGYNMIAFWQETRQLFKTNRLDDAREVLLRKLNNYAHFENIEITCVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ + + ++F E ADA+IE+ L V V TSD +Q + GA
Sbjct: 65 QRYDHY-KISVIFTEEEETADAYIERSAAEL-NTALQMVEVATSDLNEQWTIFSQGALRV 122
Query: 162 SSKALVSEVSLI 173
S++ L V+ +
Sbjct: 123 SARELEQRVNTV 134
>gi|376004835|ref|ZP_09782450.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423062556|ref|ZP_17051346.1| hypothetical protein SPLC1_S040390 [Arthrospira platensis C1]
gi|375326783|emb|CCE18203.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406715891|gb|EKD11043.1| hypothetical protein SPLC1_S040390 [Arthrospira platensis C1]
Length = 182
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VL VDGYN+ G WP+L+ ++ AR+ LIE L+ +S + +VFDA P
Sbjct: 9 VLFVDGYNIIGIWPRLQQKRDGESMESARRHLIETLINYSAFEGLDARIVFDAHYQNTPG 68
Query: 104 HKEEF---IGVDIVFPGETCADAWIEKEIVALREDGCPK-------VWVVTSDHLQQHAA 153
E+ + + G+T AD +IEK +L C K + V TSD QQ
Sbjct: 69 VSEKISRNLLIHYTGYGQT-ADTYIEKMCASL----CHKLRLSRRRLLVATSDRAQQLTV 123
Query: 154 YGAGAFVWSSKALVSEV 170
G GA W S +SE
Sbjct: 124 MGYGA-EWMSAMQLSEA 139
>gi|22536394|ref|NP_687245.1| hypothetical protein SAG0210 [Streptococcus agalactiae 2603V/R]
gi|76788167|ref|YP_328941.1| hypothetical protein SAK_0273 [Streptococcus agalactiae A909]
gi|76799583|ref|ZP_00781708.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gi|77405362|ref|ZP_00782457.1| YacP [Streptococcus agalactiae H36B]
gi|77409665|ref|ZP_00786335.1| YacP [Streptococcus agalactiae COH1]
gi|77410952|ref|ZP_00787308.1| YacP [Streptococcus agalactiae CJB111]
gi|77413789|ref|ZP_00789969.1| YacP [Streptococcus agalactiae 515]
gi|406708739|ref|YP_006763465.1| hypothetical protein A964_0223 [Streptococcus agalactiae
GD201008-001]
gi|410593909|ref|YP_006950636.1| YacP-like NYN [Streptococcus agalactiae SA20-06]
gi|421146698|ref|ZP_15606403.1| hypothetical protein GB112_02368 [Streptococcus agalactiae GB00112]
gi|424050225|ref|ZP_17787773.1| hypothetical protein WY5_09286 [Streptococcus agalactiae ZQ0910]
gi|22533221|gb|AAM99117.1|AE014201_15 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|76563224|gb|ABA45808.1| conserved hypothetical protein [Streptococcus agalactiae A909]
gi|76585066|gb|EAO61699.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gi|77160151|gb|EAO71282.1| YacP [Streptococcus agalactiae 515]
gi|77163007|gb|EAO73962.1| YacP [Streptococcus agalactiae CJB111]
gi|77171734|gb|EAO74933.1| YacP [Streptococcus agalactiae COH1]
gi|77176040|gb|EAO78814.1| YacP [Streptococcus agalactiae H36B]
gi|389648300|gb|EIM69810.1| hypothetical protein WY5_09286 [Streptococcus agalactiae ZQ0910]
gi|401686616|gb|EJS82591.1| hypothetical protein GB112_02368 [Streptococcus agalactiae GB00112]
gi|406649624|gb|AFS45025.1| hypothetical protein A964_0223 [Streptococcus agalactiae
GD201008-001]
gi|410517548|gb|AFV71692.1| YacP-like NYN [Streptococcus agalactiae SA20-06]
Length = 172
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL 101
+LLVDGYN+ +W F RL+ AR+ L+ +L ++ + ++ VFDA + G+
Sbjct: 5 SILLVDGYNMIAFWKDTRQLFKSNRLEEAREVLLRKLNHYAHFEHIDIICVFDAQYVPGV 64
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+++ + ++F E AD++IE+ L + V V TSD +Q + GA
Sbjct: 65 RQRYDQY-KISVIFTEEDETADSYIERAAAELNQSVLNLVSVATSDLNEQWTIFSQGALR 123
Query: 161 WSSKALVSEVSLI 173
S++ L V+ +
Sbjct: 124 VSARELEQRVATV 136
>gi|224005416|ref|XP_002296359.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586391|gb|ACI65076.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 412
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 29/164 (17%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSG-- 100
P++LVDGYNV W +L+ H +KG AR L+ +L E + + ++ VFD
Sbjct: 113 PLMLVDGYNVIYQWSRLKKHMLKGNTQSARDLLVRDLEELHLYKGWRIECVFDGFGRNVK 172
Query: 101 ----------------LPTHKEEFI------GVDIVFPG-ETCADAWIEKEIVALREDGC 137
+P H+ +F GV IV+ G AD++IE + ++
Sbjct: 173 GALGDGPGSGGANGGKVPLHERQFKREDTGRGVRIVYSGVGASADSYIESRCIDAKDVTK 232
Query: 138 PKVW----VVTSDHLQQHAAYGAGAFVWSSKALVSEVSLIIYYT 177
K+ VV++D + + GAGA SS V E+ + T
Sbjct: 233 GKLTGSLIVVSNDSMIRLVGTGAGALCMSSDRFVEELKAVKKVT 276
>gi|374996205|ref|YP_004971704.1| small GTP-binding protein domain-containing protein
[Desulfosporosinus orientis DSM 765]
gi|357214571|gb|AET69189.1| small GTP-binding protein domain protein [Desulfosporosinus
orientis DSM 765]
Length = 882
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ WP+L+ +D AR +L++ L + IR+ +++ VFDA + H
Sbjct: 713 LLVDGYNIIHAWPELKE-LADENMDGARMRLLDILSNYQGIRKCQIIAVFDAYR--VQGH 769
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGA 158
EE + + +VF E AD +IEK D K + V TSD LQQ GAG
Sbjct: 770 AEEVMDYHNIHMVFTREAQTADQYIEK----FAHDHSKKYHITVATSDGLQQIIIRGAGC 825
Query: 159 FVWSSKALVSEVSL 172
+ S++ L E+ +
Sbjct: 826 ALLSARDLKVEIDV 839
>gi|332685574|ref|YP_004455348.1| hypothetical protein MPTP_0040 [Melissococcus plutonius ATCC 35311]
gi|379726653|ref|YP_005318838.1| hypothetical protein MPD5_0035 [Melissococcus plutonius DAT561]
gi|332369583|dbj|BAK20539.1| hypothetical protein MPTP_0040 [Melissococcus plutonius ATCC 35311]
gi|376317556|dbj|BAL61343.1| hypothetical protein MPD5_0035 [Melissococcus plutonius DAT561]
Length = 176
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL- 101
+L+VDGYN+ G WP+L + +L+ AR L+ L ++ ++V++VFDA L+ G+
Sbjct: 5 LLIVDGYNMIGAWPELVKLKKQDKLEDARDDLLNRLSNYAKYEGIEVIIVFDAQLVPGIQ 64
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
T+K+ + V ET AD++IE+ I + + +V V TSD +Q + GA
Sbjct: 65 QTYKKSRLTVIFTKEDET-ADSYIER-IAGEKNNHLTQVTVATSDLAEQWMVFSKGALRI 122
Query: 162 SSKAL 166
S++ L
Sbjct: 123 SAREL 127
>gi|239825675|ref|YP_002948299.1| hypothetical protein GWCH70_0093 [Geobacillus sp. WCH70]
gi|239805968|gb|ACS23033.1| protein of unknown function DUF901 [Geobacillus sp. WCH70]
Length = 170
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +L+VDGYN+ G WP+L + L AR LI ++ E+ +V++VFDA +
Sbjct: 1 MNILIVDGYNMIGAWPELRKLKEEDDLAAARDLLISKMAEYQGFTGDQVIIVFDAHLIQG 60
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K + V+++F E AD IE+ +L + KV+V TSD+ +Q + GA
Sbjct: 61 NEKKYKDHQVEVIFTKENETADERIERLAKSLI-NVQTKVYVATSDYTEQWTIFSQGALR 119
Query: 161 WSSKALVSEVSLI 173
S++ L+ E+ I
Sbjct: 120 KSARELLVEMESI 132
>gi|16331235|ref|NP_441963.1| hypothetical protein sll0297 [Synechocystis sp. PCC 6803]
gi|383322978|ref|YP_005383831.1| hypothetical protein SYNGTI_2069 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326147|ref|YP_005387000.1| hypothetical protein SYNPCCP_2068 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492031|ref|YP_005409707.1| hypothetical protein SYNPCCN_2068 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437299|ref|YP_005652023.1| hypothetical protein SYNGTS_2070 [Synechocystis sp. PCC 6803]
gi|451815391|ref|YP_007451843.1| hypothetical protein MYO_120900 [Synechocystis sp. PCC 6803]
gi|1001411|dbj|BAA10033.1| sll0297 [Synechocystis sp. PCC 6803]
gi|339274331|dbj|BAK50818.1| hypothetical protein SYNGTS_2070 [Synechocystis sp. PCC 6803]
gi|359272297|dbj|BAL29816.1| hypothetical protein SYNGTI_2069 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275467|dbj|BAL32985.1| hypothetical protein SYNPCCN_2068 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278637|dbj|BAL36154.1| hypothetical protein SYNPCCP_2068 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961388|dbj|BAM54628.1| hypothetical protein BEST7613_5697 [Synechocystis sp. PCC 6803]
gi|451781360|gb|AGF52329.1| hypothetical protein MYO_120900 [Synechocystis sp. PCC 6803]
Length = 195
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G W L+ + L++ARQ LI+EL+ +S + + VVFDA P
Sbjct: 9 LLLVDGYNIIGQWNHLKQTRERFGLEMARQTLIDELISYSSHQGYQTQVVFDAQYQQSPA 68
Query: 104 HKEE---FIGVDIVFPGETCADAWIEKEIVALREDGCP---KVWVVTSDHLQQHAAYGAG 157
+E + + +T AD +IEK R +V V TSD QQ G G
Sbjct: 69 SQEHPSPHLSIHYTAWLQT-ADTFIEKRCAHYRRHTYEYPGRVIVATSDRAQQLTVVGYG 127
Query: 158 AFVWSSKALVSEV 170
A S+ L EV
Sbjct: 128 AEWMSAHLLAQEV 140
>gi|339302398|ref|ZP_08651451.1| hypothetical protein containing DUF901 [Streptococcus agalactiae
ATCC 13813]
gi|417004324|ref|ZP_11943057.1| hypothetical protein FSLSAGS3026_01313 [Streptococcus agalactiae
FSL S3-026]
gi|319744131|gb|EFV96504.1| hypothetical protein containing DUF901 [Streptococcus agalactiae
ATCC 13813]
gi|341578123|gb|EGS28520.1| hypothetical protein FSLSAGS3026_01313 [Streptococcus agalactiae
FSL S3-026]
Length = 172
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL 101
+LLVDGYN+ +W F RL+ AR+ L+ +L ++ + ++ VFDA + G+
Sbjct: 5 SILLVDGYNMIAFWKDTRQLFKSNRLEEAREVLLSKLNHYAHFEHIDIICVFDAQYVPGV 64
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+++ + ++F E AD++IE+ L + V V TSD +Q + GA
Sbjct: 65 RQRYDQY-KISVIFTEEDETADSYIERAAAELNQSVLNLVSVATSDLNEQWTIFSQGALR 123
Query: 161 WSSKALVSEVSLI 173
S++ L V+ +
Sbjct: 124 VSARELEQRVATV 136
>gi|430853980|ref|ZP_19471702.1| hypothetical protein OGW_05320 [Enterococcus faecium E1258]
gi|430539657|gb|ELA79897.1| hypothetical protein OGW_05320 [Enterococcus faecium E1258]
Length = 176
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + ++ AR+ L+ L ++ ++V+VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGSWPELVQLKKQYKMADAREALLHRLSNYAKYEGLEVIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +++ +D+VF E AD++IE+ I D +V V TSD +Q + GA
Sbjct: 65 QNYKKY-QLDVVFTKEDETADSYIER-IAGQLNDRLTQVTVATSDLAEQWMIFSQGALRT 122
Query: 162 SS 163
S+
Sbjct: 123 SA 124
>gi|404482039|ref|ZP_11017268.1| small GTP-binding protein domain protein [Clostridiales bacterium
OBRC5-5]
gi|404345009|gb|EJZ71364.1| small GTP-binding protein domain protein [Clostridiales bacterium
OBRC5-5]
Length = 869
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ + K N + +D AR +L+E L+++ ++ +++VVFDA + PT
Sbjct: 701 LLVDGYNII-FASKSLNELAQINIDAARDRLVELLIDYKAYKDYEIIVVFDAYRLVNHPT 759
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVAL--REDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ F GV +V+ AD +IEK + R D V V TSD ++Q G GA +
Sbjct: 760 EVQNFSGVYVVYTKTAETADQYIEKTTHEMIKRYD----VTVATSDGIEQIIIRGKGAIL 815
Query: 161 WSSKALVSEV 170
S++ + ++
Sbjct: 816 ISAREFLKDL 825
>gi|375089948|ref|ZP_09736270.1| hypothetical protein HMPREF9708_00660 [Facklamia languida CCUG
37842]
gi|374566234|gb|EHR37481.1| hypothetical protein HMPREF9708_00660 [Facklamia languida CCUG
37842]
Length = 179
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L VDGYN+ G WP+L L AR +L+ EL + +++ ++VVFDA + G+
Sbjct: 8 ILFVDGYNMIGAWPELAKLQRADELAQARDQLLFELSTYRKRKDLMIIVVFDAQFVPGIT 67
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
++ V++VF E ADA+IE+E V+ +V V TSD +Q + GA
Sbjct: 68 KSYSQY-QVEVVFTQEKETADAYIERE-VSQWISPLNRVIVATSDQAEQWLIFQRGALRL 125
Query: 162 SSKALVSEVS 171
S+ L+ +++
Sbjct: 126 SANELLMQIN 135
>gi|293115642|ref|ZP_05792463.2| tetracycline resistance protein TetP [Butyrivibrio crossotus DSM
2876]
gi|292809241|gb|EFF68446.1| tetracycline resistance protein TetP [Butyrivibrio crossotus DSM
2876]
Length = 856
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV W +L + K LD AR KL++ L + I V ++ VFDA ++G T
Sbjct: 715 LLVDGYNVIFAWKEL-SELAKVNLDGARLKLLDILCNYQGITGVNLIAVFDAYKIAGHDT 773
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IE+ A + VVTSD L+Q GAG + S
Sbjct: 774 EYSDYHNIHVVYTKEAETADRYIER--FAHNNGTRYDIRVVTSDGLEQVIIRGAGCTLVS 831
Query: 163 SKALVSEVSL 172
S+ EV L
Sbjct: 832 SREFEKEVEL 841
>gi|402834790|ref|ZP_10883382.1| YacP-like NYN domain protein [Selenomonas sp. CM52]
gi|402276980|gb|EJU26074.1| YacP-like NYN domain protein [Selenomonas sp. CM52]
Length = 176
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
++DGYNV P+L + + G L AR +L+ L+E+ + + VVFDAL + H
Sbjct: 8 FIIDGYNVIHALPELAS--LAGDLAEARDRLLHLLMEYGAYEKYDMTVVFDALFASGEEH 65
Query: 105 KEEFI-GVDIVFPGE-TCADAWIEK----EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
KE+ ++++ GE AD+ IE+ + RE V VVTSD +Q A GAGA
Sbjct: 66 KEQVAPHFEVIYTGEGVTADSCIERLAYESVRTSRE-----VHVVTSDGAEQSAILGAGA 120
Query: 159 FVWSSKAL 166
+ SS L
Sbjct: 121 YRISSAEL 128
>gi|428779275|ref|YP_007171061.1| RNA-binding protein containing a PIN domain [Dactylococcopsis
salina PCC 8305]
gi|428693554|gb|AFZ49704.1| putative RNA-binding protein containing a PIN domain
[Dactylococcopsis salina PCC 8305]
Length = 179
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
P+LLVDGYN+ G W +L++ L+ AR +L++ ++ ++ + + VVFDA P
Sbjct: 7 PILLVDGYNIIGAWSELKS-LRDHDLESARYRLVDLMINYTASKGYQTQVVFDAHFQATP 65
Query: 103 THKE---EFIGVDIVFPGETCADAWIEKEIVALREDG---CPKVWVVTSDHLQQHAAYGA 156
+E +++ V GET AD +IEK G + V TSD QQ G
Sbjct: 66 KVRETPTDYLSVYYTAFGET-ADTYIEKFCAQNSRQGKMVQHHLIVATSDRAQQLTVSGY 124
Query: 157 GAFVWSSKALVSEVSL 172
GA S++ L +++L
Sbjct: 125 GAQWRSAEQLAHDLTL 140
>gi|224542215|ref|ZP_03682754.1| hypothetical protein CATMIT_01390 [Catenibacterium mitsuokai DSM
15897]
gi|224524850|gb|EEF93955.1| putative translation elongation factor G [Catenibacterium mitsuokai
DSM 15897]
Length = 838
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Query: 33 NTNQGIDNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVV 92
NT Q +D L+VDGYNV W +L+ K L AR KLI+ L+ + R +++
Sbjct: 676 NTVQVLDE---YLIVDGYNVIFAWDELKE-LAKENLGSARDKLIDILMSYKGYRGCHMIL 731
Query: 93 VFDALMSGLPTHK---EEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHL 148
VFDA +P +K + + ++IV+ E ADA+IE + + G ++ V TSD+L
Sbjct: 732 VFDAYK--VPQNKGKSQMYHDMEIVYTKEGQTADAYIES--ITKQMGGQYRLVVATSDNL 787
Query: 149 QQHAAYGAGAFVWSSKALVSEV 170
+Q G GA SS+ L+ +V
Sbjct: 788 EQKIVLGHGATRISSRELLQDV 809
>gi|443310266|ref|ZP_21039924.1| putative RNA-binding protein containing a PIN domain [Synechocystis
sp. PCC 7509]
gi|442779672|gb|ELR89907.1| putative RNA-binding protein containing a PIN domain [Synechocystis
sp. PCC 7509]
Length = 182
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G W L+ + L+ AR +L+ L+ +S ++ VVFDA +
Sbjct: 9 VLLVDGYNMIGAWSYLKKTRDRLGLEAARGELVSALINYSALQGYATQVVFDAQYQNTCS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALR----EDGCPKVWVVTSDHLQQHAAYGA 156
+E + + V G+T AD +IEK ALR + ++ V TSD +QQ G
Sbjct: 69 SQETINDNLLVHYTDFGQT-ADTYIEKSCAALRPYLKQSHLCRLIVATSDRVQQLVVVGY 127
Query: 157 GAFVWSSKALVSEV 170
GA S++ L EV
Sbjct: 128 GAEWMSAQQLNYEV 141
>gi|56961914|ref|YP_173636.1| hypothetical protein ABC0132 [Bacillus clausii KSM-K16]
gi|56908148|dbj|BAD62675.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 170
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G WP L+ + AR +L++ L E++ +V+ VFDA M
Sbjct: 4 ILLVDGYNMIGAWPSLQK-LKEKDFGAARDQLVDLLAEYAAFTGYRVIAVFDAHMVAGIG 62
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALRE-DGCPKVWVVTSDHLQQHAAYGAGAFVW 161
V+IV+ + AD IEK + L+ D + V TSD +Q A+G+GA
Sbjct: 63 KSYNHHRVEIVYTKKNETADERIEKLVQTLKRIDRV--IHVATSDLAEQSHAFGSGALRK 120
Query: 162 SSKALVSEVSL 172
S++ + E+ +
Sbjct: 121 SAREMAIEMGM 131
>gi|302876552|ref|YP_003845185.1| hypothetical protein Clocel_3751 [Clostridium cellulovorans 743B]
gi|307687224|ref|ZP_07629670.1| hypothetical protein Ccel74_03641 [Clostridium cellulovorans 743B]
gi|302579409|gb|ADL53421.1| protein of unknown function DUF901 [Clostridium cellulovorans 743B]
Length = 169
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 47 VDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKE 106
+DGYN+ WP L+ + ARQ LIE++ + + ++FDA + KE
Sbjct: 6 IDGYNILNSWPNLKPKN-DTEFEGARQSLIEKMQNYGGYNGDNIFIIFDAHLVQGSLEKE 64
Query: 107 EFIG-VDIVFP--GETCADAWIEKEIVALREDGCPK-VWVVTSDHLQQHAAYGAGAFVWS 162
E +G V +VF GET AD++IE+ + L G K V VVT+D L+Q + GA S
Sbjct: 65 EIVGNVTVVFTKEGET-ADSYIERTVNNL---GRRKNVLVVTNDSLEQQLIFQRGAIRMS 120
Query: 163 SKALVSEVSLI 173
S EV I
Sbjct: 121 SLEFYHEVKNI 131
>gi|427739031|ref|YP_007058575.1| putative RNA-binding protein containing a PIN domain [Rivularia sp.
PCC 7116]
gi|427374072|gb|AFY58028.1| putative RNA-binding protein containing a PIN domain [Rivularia sp.
PCC 7116]
Length = 183
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
VLLVDGYN+ G W L+ L+ AR +L+E LV +S + VVFDA
Sbjct: 8 AVLLVDGYNIIGAWSCLKKTCDNVGLEAARDELLEALVSYSAFTGYQTQVVFDAHFQKNG 67
Query: 103 THKEEFIGVDIVFP---GETCADAWIEKEIVAL----REDGCPKVWVVTSDHLQQHAAYG 155
+++E + + G+T AD +IEK +L RE +V V TSD QQ G
Sbjct: 68 SNEEVVTKLVTAYYTDFGQT-ADTYIEKLCASLRQKVRERLLSRVVVATSDRAQQLTVQG 126
Query: 156 AGAFVWSSKALVSEVSLIIYYT 177
GA S++ L E+ + T
Sbjct: 127 YGADWISAQQLCYEIEATVCRT 148
>gi|288904448|ref|YP_003429669.1| hypothetical protein GALLO_0229 [Streptococcus gallolyticus UCN34]
gi|288731173|emb|CBI12721.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
Length = 170
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K +LD AR L+ +L ++ + ++ VFDA + G+
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKKNQLDEARNILLRKLNNYAHFENLDIICVFDAQYVPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
+++ + ++F E AD++IE+ L P+ V V TSD +Q + GA
Sbjct: 65 QRYDQY-KIQVIFTEEDETADSYIERTAAEL---NTPRNLVEVATSDLNEQWTVFSQGAL 120
Query: 160 VWSSKALVSEVSLI 173
S++ L V+ +
Sbjct: 121 RVSARELEQRVNTV 134
>gi|256546105|ref|ZP_05473458.1| tetracycline resistance protein [Anaerococcus vaginalis ATCC 51170]
gi|256398222|gb|EEU11846.1| tetracycline resistance protein [Anaerococcus vaginalis ATCC 51170]
Length = 174
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 47 VDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS-GLPTHK 105
VDGYN+ WP+L + L++AR+KLI+E+ E++ + K+VVVFDA S G +
Sbjct: 11 VDGYNIINSWPELI-RIKENSLELAREKLIDEMAEYASLSNEKLVVVFDAYNSDGEKENI 69
Query: 106 EEFIGVDIVFPGE-TCADAWIEK--EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
E +G+ IV+ + AD +IEK A R + V VVT D Q A+ GA
Sbjct: 70 FEKLGIKIVYTKKFQTADTYIEKMTNKYARRHN----VKVVTDDGQIQSLAFERGA 121
>gi|306830481|ref|ZP_07463651.1| PIN domain containing protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|306832718|ref|ZP_07465855.1| PIN domain containing protein [Streptococcus bovis ATCC 700338]
gi|325977444|ref|YP_004287160.1| hypothetical protein SGGBAA2069_c02440 [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|336063576|ref|YP_004558435.1| hypothetical protein SGPB_0215 [Streptococcus pasteurianus ATCC
43144]
gi|386336958|ref|YP_006033127.1| hypothetical protein SGGB_0271 [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|304425174|gb|EFM28303.1| PIN domain containing protein [Streptococcus bovis ATCC 700338]
gi|304427506|gb|EFM30608.1| PIN domain containing protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325177372|emb|CBZ47416.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334279594|dbj|BAK27168.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|334281776|dbj|BAK29349.1| conserved hypothetical protein [Streptococcus pasteurianus ATCC
43144]
Length = 176
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K +LD AR L+ +L ++ + ++ VFDA + G+
Sbjct: 11 ILLVDGYNMIAFWQETRQLFKKNQLDEARNILLRKLNNYAHFENLDIICVFDAQYVPGVR 70
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
+++ + ++F E AD++IE+ L P+ V V TSD +Q + GA
Sbjct: 71 QRYDQY-KIQVIFTEEDETADSYIERTAAEL---NTPRNLVEVATSDLNEQWTVFSQGAL 126
Query: 160 VWSSKALVSEVSLI 173
S++ L V+ +
Sbjct: 127 RVSARELEQRVNTV 140
>gi|292670593|ref|ZP_06604019.1| tetracycline resistance protein [Selenomonas noxia ATCC 43541]
gi|292647759|gb|EFF65731.1| tetracycline resistance protein [Selenomonas noxia ATCC 43541]
Length = 177
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
LVDGYNV WP+L ++G L+ AR L+ L E+ ++ VVFDA + H+
Sbjct: 11 LVDGYNVINAWPELMR--LRGNLNEARDVLVHILTEYGTFENYEMTVVFDAFFTEEEEHE 68
Query: 106 ---EEFIGVDIVFPGETCADAWIEK-EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ + V GET AD+ IE+ A+R +V+VVTSD +Q GAGA+
Sbjct: 69 LQISDRMKVIYTGAGET-ADSCIERLAYTAVR--AGREVYVVTSDGAEQSVILGAGAYRI 125
Query: 162 SSKALVSEV 170
+S L V
Sbjct: 126 TSPELRRSV 134
>gi|172037042|ref|YP_001803543.1| hypothetical protein cce_2127 [Cyanothece sp. ATCC 51142]
gi|354555809|ref|ZP_08975108.1| protein of unknown function DUF901 [Cyanothece sp. ATCC 51472]
gi|171698496|gb|ACB51477.1| DUF901-containing protein [Cyanothece sp. ATCC 51142]
gi|353552133|gb|EHC21530.1| protein of unknown function DUF901 [Cyanothece sp. ATCC 51472]
Length = 177
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
P+LLVDGYN+ G W L++ + L+ AR +L+E L+ +++ + K VVFD+
Sbjct: 6 APLLLVDGYNIIGSWSPLKSTCDRHGLEQARYELVETLINYTVHKGYKTQVVFDSQYQKT 65
Query: 102 PTHKEEF-IGVDIVFPGET-CADAWIEKEIVAL---REDGCPKVWVVTSDHLQQHAAYGA 156
P+ E + I F T AD +IEK ++ ++ V TSD Q A G
Sbjct: 66 PSSIEHHSTHLSIYFTAWTQTADTYIEKVCAGFFRRQQTNYNRIIVATSDRDQYLTAMGY 125
Query: 157 GAFVWSSKALVSEV 170
GA S + L ++
Sbjct: 126 GAEWMSVEVLAKDI 139
>gi|403382849|ref|ZP_10924906.1| hypothetical protein PJC66_23817 [Paenibacillus sp. JC66]
Length = 173
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L+VDGYN+ G WP+L+ + L AR +LIE L E+ ++V++VFDA + GL
Sbjct: 5 LIVDGYNIIGAWPELQ-RLKEIELVEARDRLIEILAEYQAYSGIRVLLVFDAYRVPGLAV 63
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E+ + I + E AD IE+ + L +++V TSD ++Q+ +G GA S
Sbjct: 64 KLEQN-RLAIYYTKEKETADERIERLVNEL-SGRFTRIYVATSDMVEQNVIFGKGALRIS 121
Query: 163 SKALVSEVSL 172
+ L+ +V L
Sbjct: 122 AAELLVKVRL 131
>gi|374298141|ref|YP_005048332.1| small GTP-binding protein domain protein [Clostridium clariflavum
DSM 19732]
gi|359827635|gb|AEV70408.1| small GTP-binding protein domain protein [Clostridium clariflavum
DSM 19732]
Length = 882
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 6 TSYRRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLENHFIK 65
T+++R+K T+L ++ + + LLVDGYN+ W +L+
Sbjct: 684 TAWKRRK---------TDLESYYKTVRQAGVQREAKEEYLLVDGYNIIYAWQELK-ELAD 733
Query: 66 GRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFI---GVDIVFPGET-CA 121
+D A+ KL++ L + R+ +V+VVFDA + H+EE I + +V+ E A
Sbjct: 734 ENMDGAKMKLLDALCNYQWFRKCQVIVVFDAYR--VEGHREEVIDYYNIHVVYTREAQTA 791
Query: 122 DAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
D +IEK A + V TSD LQQ G G + S++ L +E+
Sbjct: 792 DQYIEK--FAHDNKKNYNITVATSDGLQQIIVRGEGCALLSARELKAEI 838
>gi|334136712|ref|ZP_08510169.1| hypothetical protein HMPREF9413_2906 [Paenibacillus sp. HGF7]
gi|333605733|gb|EGL17090.1| hypothetical protein HMPREF9413_2906 [Paenibacillus sp. HGF7]
Length = 170
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGL- 101
L+VDGYN+ G WP+L+ ++ R L+ AR +LI L E+ VKV +VFDA + GL
Sbjct: 5 LIVDGYNIIGAWPELKQ--LRDRSLEEARDRLITILAEYQSFSGVKVYLVFDAYQVPGLG 62
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
T+ + + V ET AD IE+ + L +++V TSD +QH +G GA
Sbjct: 63 KTYVQSRLSVLYTKEKET-ADELIERLVTQL-TGRRRQIYVATSDMTEQHVIFGKGAL 118
>gi|402311938|ref|ZP_10830868.1| YacP-like NYN domain protein [Lachnospiraceae bacterium ICM7]
gi|400370599|gb|EJP23581.1| YacP-like NYN domain protein [Lachnospiraceae bacterium ICM7]
Length = 869
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ + K N + +D AR +LIE L+++ ++ +++ VFDA + PT
Sbjct: 701 LLVDGYNII-FASKSLNELAQINIDAARDRLIELLIDYKAYKDYEIIAVFDAYRLVNHPT 759
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVAL--REDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ F GV +V+ AD +IEK + R D V V TSD ++Q G GA +
Sbjct: 760 EVQNFSGVYVVYTKTAETADQYIEKTTHEMIKRYD----VTVATSDGIEQIIIRGKGAIL 815
Query: 161 WSSKALVSEV 170
S++ + ++
Sbjct: 816 ISAREFLKDL 825
>gi|357057471|ref|ZP_09118331.1| hypothetical protein HMPREF9334_00047 [Selenomonas infelix ATCC
43532]
gi|355375375|gb|EHG22662.1| hypothetical protein HMPREF9334_00047 [Selenomonas infelix ATCC
43532]
Length = 177
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
LVDGYNV WP+L ++G LD AR L+ L E+ ++ VVFDA + H+
Sbjct: 11 LVDGYNVINAWPELMR--LRGNLDEARDVLVHILTEYGAFENYEMTVVFDAFFTEDEEHE 68
Query: 106 EEFIG-VDIVFPGE-TCADAWIEK-EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + +++ G AD+ IE+ +A+R +V+VVTSD +Q GAGA+ +
Sbjct: 69 LQITDRMRVIYTGAGETADSCIERLAYMAVR--VGREVYVVTSDGAEQSVILGAGAYRIT 126
Query: 163 SKALVSEV 170
S L V
Sbjct: 127 SPELRRSV 134
>gi|336435292|ref|ZP_08615009.1| hypothetical protein HMPREF0988_00594 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336001683|gb|EGN31819.1| hypothetical protein HMPREF0988_00594 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 760
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L K +D AR +L++ L + IR+ +++VFDA + G P
Sbjct: 577 LLVDGYNIIFAWEEL-RELAKINIDGARGRLMDILSNYQGIRKCTLILVFDAYKVEGFPG 635
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ + +V+ E AD +IEK VA +V V TSD +Q G G + S
Sbjct: 636 EIQQYHNIHVVYTKEAETADQYIEK--VAHEIGRKYEVTVATSDGTEQVIIRGQGCHLLS 693
Query: 163 SKALVSEVSL 172
+K L +E+ L
Sbjct: 694 AKELHTEIVL 703
>gi|339442797|ref|YP_004708802.1| hypothetical protein CXIVA_17340 [Clostridium sp. SY8519]
gi|338902198|dbj|BAK47700.1| hypothetical protein CXIVA_17340 [Clostridium sp. SY8519]
Length = 902
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L + LD AR++L++ + ++ R ++++VFDA + G
Sbjct: 732 LLVDGYNIIFSWEEL-KELARVNLDAAREQLMDIMSNYAGYRRDRLILVFDAYKVKGGTE 790
Query: 104 HKEEFIGVDIVFPGET-CADAWIEK--EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
H + +D+V+ E ADA+IE+ + R D V V TSD L+Q +G GA
Sbjct: 791 HVMRYHNIDVVYTREAETADAYIERVTRSIGARND----VTVATSDGLEQMIIWGHGAKR 846
Query: 161 WSSKALVSEV 170
S+ L + V
Sbjct: 847 MSAPELKTAV 856
>gi|422344112|ref|ZP_16425039.1| hypothetical protein HMPREF9432_01099 [Selenomonas noxia F0398]
gi|355377630|gb|EHG24844.1| hypothetical protein HMPREF9432_01099 [Selenomonas noxia F0398]
Length = 177
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
LVDGYNV WP+L ++G L+ AR L+ L E+ ++ VVFDA + H+
Sbjct: 11 LVDGYNVINAWPELMR--LRGNLNEARDVLVHILTEYGAFENYEMTVVFDAFFTEEEEHE 68
Query: 106 ---EEFIGVDIVFPGETCADAWIEK-EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ + V GET AD+ IE+ A+R +V+VVTSD +Q GAGA+
Sbjct: 69 LQISDRMKVIYTGAGET-ADSCIERLAYTAVR--AGREVYVVTSDGAEQSVILGAGAYRI 125
Query: 162 SSKALVSEV 170
+S L V
Sbjct: 126 TSPELRRSV 134
>gi|302390626|ref|YP_003826447.1| hypothetical protein Toce_2110 [Thermosediminibacter oceani DSM
16646]
gi|302201254|gb|ADL08824.1| protein of unknown function DUF901 [Thermosediminibacter oceani DSM
16646]
Length = 176
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 45 LLVDGYNVCGYWPKL-ENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
L VDGYNV WP+L E + L+ AR+KLI+ + +++ + V++VFDA + G
Sbjct: 9 LFVDGYNVINAWPELVEAKSLN--LEAAREKLIDIMADYAAQTGINVIIVFDAHQVEGGR 66
Query: 103 THKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
GV++VF GET AD +IEK + ++ +V V TSD ++Q G GA
Sbjct: 67 RIIYRVNGVEVVFTKEGET-ADNYIEKTVDSM--SMGQRVRVATSDWIEQQIVMGRGAIR 123
Query: 161 WSSKALVSEVSLII 174
S++ L E+ +I
Sbjct: 124 VSARELHQEIKDLI 137
>gi|428225924|ref|YP_007110021.1| hypothetical protein GEI7407_2494 [Geitlerinema sp. PCC 7407]
gi|427985825|gb|AFY66969.1| protein of unknown function DUF901 [Geitlerinema sp. PCC 7407]
Length = 189
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYNV G W +L+ L+ AR +L+E L +S + VVFDA +
Sbjct: 10 LLVDGYNVIGAWSELKQARDCEGLETARWQLVETLTNYSAFQGYATEVVFDAYYQDSSSR 69
Query: 105 KEEFIG-VDIVFPG-ETCADAWIEKEIVALRED---GCPKVWVVTSDHLQQHAAYGAGAF 159
+E + I + AD +IEK R+D ++ V TSD QQ G GA
Sbjct: 70 RESVTDHLSIYYTDFNQTADTYIEKVCALFRQDLRKYSQRLIVATSDRAQQLTVVGYGAE 129
Query: 160 VWSSKALVSEV 170
SS+ L EV
Sbjct: 130 WMSSQQLALEV 140
>gi|312862608|ref|ZP_07722849.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
gi|311101868|gb|EFQ60070.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
Length = 180
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F +LD AR+ LI +L ++ + ++ VFDA
Sbjct: 14 ILLVDGYNMIAFWQETRQLFKANQLDEARETLIRKLNHYANFEHIDIICVFDAQFVPGSR 73
Query: 104 HKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + V ++F + AD++IE+ + V V TSD +Q A + GA S
Sbjct: 74 QRYDQYRVSVIFTEADETADSYIERSAAEMNT-VQNLVEVATSDLNEQWAIFSQGALRVS 132
Query: 163 SKALVSEVSLI 173
++ L V+ +
Sbjct: 133 ARELEERVNTV 143
>gi|25010280|ref|NP_734675.1| hypothetical protein gbs0205 [Streptococcus agalactiae NEM316]
gi|23094632|emb|CAD45850.1| Unknown [Streptococcus agalactiae NEM316]
Length = 172
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL 101
+LLVDGYN+ +W F RL+ AR+ L+ +L ++ + ++ VFDA + G+
Sbjct: 5 SILLVDGYNMIAFWKDTRQLFKSNRLEEAREVLLRKLNHYAHFEHIDIICVFDAQYVPGV 64
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+++ + ++F E AD++IE+ L + V V TSD +Q + G
Sbjct: 65 RQRYDQY-KISVIFTEEDETADSYIERAAAELNQSVLNLVSVATSDLNEQWTIFSQGTLR 123
Query: 161 WSSKALVSEVSLI 173
S++ L V+ +
Sbjct: 124 VSARELEQRVATV 136
>gi|449017707|dbj|BAM81109.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 380
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 40/166 (24%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS---GL 101
+VDGYNV G P+L + G L+ AR+ LIE++ S IR +VFDA + G
Sbjct: 169 FIVDGYNVIGAAPELNAYVRDGDLETARRLLIEDVTNLSAIRGWHFSIVFDATTNPQDGY 228
Query: 102 PTHKE--EFI-----------------------------------GVDIVFPGETCADAW 124
P K+ E I V+I++P AD++
Sbjct: 229 PRTKDTTEKITTALIHPDVNAKAASGTQHQSRARKSAKGEEASTESVEIIYPACKSADSY 288
Query: 125 IEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
I + D +VW T D + Q +GAFV SS+ + EV
Sbjct: 289 IISRVRGAARDHNMEVWAATGDSIVQSLVRASGAFVISSELFLREV 334
>gi|414153552|ref|ZP_11409875.1| conserved hypothetical protein [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411454950|emb|CCO07779.1| conserved hypothetical protein [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 170
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPTH 104
+VDGYN+ WP+ I LD R KL+ L F+ +V VVFDA L+ H
Sbjct: 6 VVDGYNIIHAWPEFAG-MIDSGLDHCRDKLVHILANFAGFEGSRVKVVFDAHLVKRGIEH 64
Query: 105 KEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+E G+++ + GET AD+ IEK + L + G V+VVTSD +Q +G GA+ +
Sbjct: 65 RETVHGIEVYYTQEGET-ADSLIEKIVGDLGKQGT--VYVVTSDWDEQKIIFGRGAYRLT 121
Query: 163 SKALVSEV 170
K +V
Sbjct: 122 PKEFRVQV 129
>gi|399889680|ref|ZP_10775557.1| hypothetical protein CarbS_14243 [Clostridium arbusti SL206]
Length = 170
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
+ +DGYNV W +L G ++ +R KL E L+ + + E K+ +VFDA +
Sbjct: 4 IFIDGYNVVNSWKELRQENT-GSMENSRLKLKEILLNYGVYNEYKIFLVFDAHLQSGSME 62
Query: 105 KEEFIGVD--IVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
K E I + IVF GET AD++IE+ + + C V VVTSD L+Q + GA
Sbjct: 63 KREKINKNLTIVFTKEGET-ADSFIERYVNNIGR-KCE-VLVVTSDSLEQQLIFQRGAVR 119
Query: 161 WSSKALVSEVSLI 173
SS E+ I
Sbjct: 120 MSSIEFYHEIKSI 132
>gi|258513622|ref|YP_003189844.1| hypothetical protein Dtox_0268 [Desulfotomaculum acetoxidans DSM
771]
gi|257777327|gb|ACV61221.1| protein of unknown function DUF901 [Desulfotomaculum acetoxidans
DSM 771]
Length = 170
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 7/132 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L++DGYNV WPKL L+ AR KL++ + S + + VVFDA + +
Sbjct: 5 LVIDGYNVIYTWPKLA-RLSDTSLEHARVKLVDIMASHSALSGQLIKVVFDAHQVKNITQ 63
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+E+ G++I++ GET ADA IE+ L + G KV+VVTSD +Q +G GA+
Sbjct: 64 RQEQVNGIEILYTQQGET-ADALIERITGDLIKLG--KVYVVTSDWDEQRIIFGRGAYRM 120
Query: 162 SSKALVSEVSLI 173
+ + L +V I
Sbjct: 121 TPRELWEQVKKI 132
>gi|167747479|ref|ZP_02419606.1| hypothetical protein ANACAC_02200 [Anaerostipes caccae DSM 14662]
gi|317471211|ref|ZP_07930579.1| elongation factor Tu GTP binding domain-containing protein
[Anaerostipes sp. 3_2_56FAA]
gi|167652841|gb|EDR96970.1| putative translation elongation factor G [Anaerostipes caccae DSM
14662]
gi|316901317|gb|EFV23263.1| elongation factor Tu GTP binding domain-containing protein
[Anaerostipes sp. 3_2_56FAA]
Length = 888
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L + +D AR KL++ + + IR+ +++VVFDA + G T
Sbjct: 726 LLVDGYNIIFAWEDL-RELAEANIDAARGKLLDIMSNYQGIRKCQLIVVFDAYRVVGHDT 784
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IEK A V V TSD ++Q G G + S
Sbjct: 785 EILDYHNIHVVYTKEAETADQYIEK--FAHEHGRKYDVTVATSDGMEQIIIRGQGCSLLS 842
Query: 163 SKALVSEVSL 172
++ L+ EV+L
Sbjct: 843 ARELLEEVNL 852
>gi|357235932|ref|ZP_09123275.1| hypothetical protein STRCR_0180 [Streptococcus criceti HS-6]
gi|356883914|gb|EHI74114.1| hypothetical protein STRCR_0180 [Streptococcus criceti HS-6]
Length = 170
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F +LD AR L+ +L ++ ++++ VFDA
Sbjct: 5 ILLVDGYNMIAFWQETHRLFKTNQLDAARTILLRKLSHYASFEGLEIICVFDAQYVPGSR 64
Query: 104 HKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
K + + ++F + AD++IE+ L +V V TSD +Q + GA S
Sbjct: 65 QKYDDYALTVIFTEKDETADSYIERTAAELNS-PLNRVEVATSDLNEQWTVFSQGALRVS 123
Query: 163 SKALVSEVSLI 173
++ L V+++
Sbjct: 124 ARELEERVNVV 134
>gi|389575573|ref|ZP_10165601.1| small GTP-binding protein domain protein [Eubacterium
cellulosolvens 6]
gi|389311058|gb|EIM55991.1| small GTP-binding protein domain protein [Eubacterium
cellulosolvens 6]
Length = 904
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L + +D AR +LIE L + RE +++VFDA + G
Sbjct: 764 LLVDGYNMIFSWEELRS-LAAVNIDAARDRLIEILANYHGTREGSLILVFDAYKVHGGRG 822
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + +VF E ADA+IEK + L + + V TSD L+Q +G GA S
Sbjct: 823 QVYPYNNIFVVFTKEKETADAYIEKTVHKLAANA--DITVATSDGLEQMIIFGDGARRMS 880
Query: 163 SKALVSEVSL 172
+ L + V L
Sbjct: 881 ASELAAAVEL 890
>gi|228477814|ref|ZP_04062442.1| conserved hypothetical protein [Streptococcus salivarius SK126]
gi|228250506|gb|EEK09720.1| conserved hypothetical protein [Streptococcus salivarius SK126]
Length = 171
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F +LD AR+ L+ +L ++ + ++ VFDA
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKTNQLDQARETLLRKLNHYANFEHIDIICVFDAQFVPGSR 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + + ++F E AD++IE+ + A V V TSD +Q A + GA S
Sbjct: 65 QRYDQYRISVIFTEEDETADSYIER-VAAEMNTVQNLVEVATSDLNEQWAIFSQGALRVS 123
Query: 163 SKALVSEVSLI 173
++ L V+ +
Sbjct: 124 ARELEERVNTV 134
>gi|322517688|ref|ZP_08070551.1| protein of hypothetical function DUF901 [Streptococcus vestibularis
ATCC 49124]
gi|322123676|gb|EFX95268.1| protein of hypothetical function DUF901 [Streptococcus vestibularis
ATCC 49124]
Length = 171
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F +LD AR+ LI +L ++ + ++ VFDA
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKANQLDEARETLIRKLNHYANFEHIDIICVFDAQFVPGSR 64
Query: 104 HKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + V ++F + AD++IE+ + V V TSD +Q A + GA S
Sbjct: 65 QRYDQYRVSVIFTEADETADSYIERSAAEMNT-VQNLVEVATSDLNEQWAIFSQGALRVS 123
Query: 163 SKALVSEVSLI 173
++ L V+ +
Sbjct: 124 ARELEERVNTV 134
>gi|328958758|ref|YP_004376144.1| ribonuclease [Carnobacterium sp. 17-4]
gi|328675082|gb|AEB31128.1| putative ribonuclease with PIN and NYN domains [Carnobacterium sp.
17-4]
Length = 174
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYN+ G WP L + +L+ AR L+ EL + +++ VVFDA +P
Sbjct: 5 LLIVDGYNIIGAWPHLVKLKNQDKLEDARDSLLHELSNYQKYTGIEIHVVFDAQF--VPG 62
Query: 104 HKEEF----IGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
++ F + V GET AD++IE+ IV +V V TSD +Q + GA
Sbjct: 63 IQQSFKKYQLSVIFTKEGET-ADSYIER-IVGKESTLLTQVTVATSDLAEQWIIFQKGAL 120
Query: 160 VWSSKALVSEVSLI 173
S+ L S+V I
Sbjct: 121 RKSANELFSDVKRI 134
>gi|291542372|emb|CBL15482.1| small GTP-binding protein domain [Ruminococcus bromii L2-63]
Length = 869
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV W L+ + LD AR LI L + + +++VFDA + G
Sbjct: 723 LLVDGYNVIFAWEHLK-ELSERSLDGARHALINILCNYQGYSKCNLILVFDAYKVKGEHR 781
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E + IV+ E AD +IEK L + KV VVTSD L+Q G GA S
Sbjct: 782 EVETVNNISIVYTKEAETADMFIEKTSHKLAK--TNKVRVVTSDALEQMIILGNGALRVS 839
Query: 163 SKALVSEV 170
S+A + EV
Sbjct: 840 SRAFLEEV 847
>gi|81300449|ref|YP_400657.1| hypothetical protein Synpcc7942_1640 [Synechococcus elongatus PCC
7942]
gi|81169330|gb|ABB57670.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 177
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+LLVDGYNV G W L+ + L+ AR +L+E L +S + VVFDA P
Sbjct: 3 ALLLVDGYNVIGAWQHLQQLRDRHGLEAARTELVELLSNYSAYQGYLTNVVFDAQYRATP 62
Query: 103 THKEEFIGVDIV--FPGETCADAWIEKEIVALRE---DGCPKVWVVTSDHLQQHAAYGAG 157
+E+ +V E AD +IE + R+ +V V TSD QQ G G
Sbjct: 63 GQQEQVTEQLVVSYTDSEQTADTYIEMTCASHRDALRTARQRVIVATSDRAQQLTVIGFG 122
Query: 158 AFVWSSKALVSEVSLII 174
A S+ L +V I
Sbjct: 123 AEWMSTHRLALDVEASI 139
>gi|397906388|ref|ZP_10507196.1| Hypothetical protein DUF901, similar to C-terminal domain of
ribosome protection-type Tc-resistance proteins
[Caloramator australicus RC3]
gi|397160557|emb|CCJ34533.1| Hypothetical protein DUF901, similar to C-terminal domain of
ribosome protection-type Tc-resistance proteins
[Caloramator australicus RC3]
Length = 172
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
+L+DGYNV W L+ L+ AR KL+E L E++ + + VVFDA +
Sbjct: 7 ILIDGYNVINQWDFLKK-LKDENLEDARDKLVEMLQEYAAFKGCSIYVVFDAHLVPGSVE 65
Query: 105 KEEFIG-VDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K E +G +++V+ GET AD +IE+ + L + G V VVTSD+L+Q G
Sbjct: 66 KHERVGKINVVYTKEGET-ADCFIERTVPQLVKMGA--VAVVTSDYLEQRITLQMGGIRI 122
Query: 162 SSKALVSEVSLI 173
+ K + E+ I
Sbjct: 123 TPKEFLLEIQNI 134
>gi|374337268|ref|YP_005093969.1| hypothetical protein SMA_0252 [Streptococcus macedonicus ACA-DC
198]
gi|372283369|emb|CCF01543.1| Hypothetical protein SMA_0252 [Streptococcus macedonicus ACA-DC
198]
Length = 170
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K +LD AR L+ +L ++ + ++ VFDA + G+
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKKNQLDEARNILLRKLNNYAHFENLDIICVFDAQYVPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+++ + ++F E AD++IE+ L V V TSD +Q + GA
Sbjct: 65 QRYDQY-KIQVIFTEEDETADSYIERTAAELNT-TLNLVEVATSDLNEQWTVFSQGALRV 122
Query: 162 SSKALVSEVSLI 173
S++ L V+ +
Sbjct: 123 SARELEQRVNTV 134
>gi|251781698|ref|YP_002996000.1| hypothetical protein SDEG_0269 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|386316208|ref|YP_006012372.1| hypothetical protein SDE12394_01220 [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
gi|408400956|ref|YP_006858919.1| hypothetical protein GGS_0249 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|410494004|ref|YP_006903850.1| hypothetical protein SDSE_0281 [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417753667|ref|ZP_12401769.1| hypothetical protein HMPREF9964_1967 [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|417927746|ref|ZP_12571134.1| hypothetical protein HMPREF9963_0568 [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|422758224|ref|ZP_16811986.1| hypothetical cytosolic protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|242390327|dbj|BAH80786.1| hypothetical protein SDEG_0269 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|322411059|gb|EFY01967.1| hypothetical cytosolic protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|323126495|gb|ADX23792.1| hypothetical cytosolic protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333769067|gb|EGL46216.1| hypothetical protein HMPREF9964_1967 [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|340765620|gb|EGR88146.1| hypothetical protein HMPREF9963_0568 [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|407967184|dbj|BAM60422.1| hypothetical protein GGS_0249 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|410439164|emb|CCI61792.1| Uncharacterized protein yacP [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 172
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W F +LD AR L+ +L ++ + ++ VFDA + GL
Sbjct: 5 ILLVDGYNMIAFWQSTRQLFKTNQLDQARNILLTKLNHYAHFENINIICVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+++ + +VF E ADA+IE+ + A V V TSD +Q + GA
Sbjct: 65 QRYDQY-KISVVFTEEEETADAYIER-MAAELNTAIHLVEVATSDLNEQWTIFSQGALRV 122
Query: 162 SSKALVSEVSLI 173
+++ L V+ +
Sbjct: 123 TARELEQRVNTV 134
>gi|320547736|ref|ZP_08042020.1| protein of hypothetical function DUF901 [Streptococcus equinus ATCC
9812]
gi|320447496|gb|EFW88255.1| protein of hypothetical function DUF901 [Streptococcus equinus ATCC
9812]
Length = 170
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F K +LD AR L+ +L ++ + ++ VFDA + G+
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKKNQLDEARNILLRKLNNYAHFENLDIICVFDAQYVPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+++ + ++F E AD++IE+ L V V TSD +Q + GA
Sbjct: 65 QRYDQY-KIQVIFTEEDETADSYIERTAAELNT-SFNLVEVATSDLNEQWTVFSQGALRV 122
Query: 162 SSKALVSEVSLI 173
S++ L V+ +
Sbjct: 123 SARELEQRVNTV 134
>gi|385840759|ref|YP_005864083.1| hypothetical protein HN6_01022 [Lactobacillus salivarius CECT 5713]
gi|300214880|gb|ADJ79296.1| Putative uncharacterized protein [Lactobacillus salivarius CECT
5713]
Length = 176
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP+L+ GRL+ AR L++ L + +++VVFDA+ T
Sbjct: 5 ILIVDAYNMIGNWPQLDKLKKSGRLEDARDLLLKILSNYRKQANTEIIVVFDAMYVPGMT 64
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ E + +V+ E AD +IE + + +V V TSD +Q + GA
Sbjct: 65 KQYEQYDLQVVWTAEDQTADTYIE-SLAGRLQTPLTQVRVATSDQAEQWTIFSQGAL 120
>gi|258512688|ref|YP_003186122.1| hypothetical protein Aaci_2729 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257479414|gb|ACV59733.1| protein of unknown function DUF901 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 169
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+++VDGYNV I+ L+ AR+++ + L ++ + V+VV+DA P
Sbjct: 4 LVIVDGYNVIARRAGRSLAQIED-LEEARREIEDLLSQYRAMYGEDVIVVYDAHRRPGPG 62
Query: 104 HKEEFIGVDIVF--PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
H EE GV IVF GET ADA IE+ + LR D ++ V TSD +Q A G GA
Sbjct: 63 HVEEQAGVRIVFTESGET-ADARIERLVYDLR-DEYREITVATSDAAEQQVALGGGALRI 120
Query: 162 SSKALV 167
S+ L+
Sbjct: 121 SANELL 126
>gi|56752454|ref|YP_173155.1| hypothetical protein syc2445_c [Synechococcus elongatus PCC 6301]
gi|56687413|dbj|BAD80635.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 183
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+LLVDGYNV G W L+ + L+ AR +L+E L +S + VVFDA P
Sbjct: 9 ALLLVDGYNVIGAWQHLQQLRDRHGLEAARTELVELLSNYSAYQGYLTNVVFDAQYRATP 68
Query: 103 THKEEFIGVDIV--FPGETCADAWIEKEIVALRE---DGCPKVWVVTSDHLQQHAAYGAG 157
+E+ +V E AD +IE + R+ +V V TSD QQ G G
Sbjct: 69 GQQEQVTEQLVVSYTDSEQTADTYIEMTCASHRDALRTARQRVIVATSDRAQQLTVIGFG 128
Query: 158 AFVWSSKALVSEVSLII 174
A S+ L +V I
Sbjct: 129 AEWMSTHRLALDVEASI 145
>gi|331001633|ref|ZP_08325156.1| hypothetical protein HMPREF0491_00018 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413354|gb|EGG92721.1| hypothetical protein HMPREF0491_00018 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 868
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ + K N + +D AR L+E L+++ ++ ++++VFDA + PT
Sbjct: 701 LLVDGYNII-FASKALNELAQINIDAARDTLVELLIDYKAYKDYEIILVFDAYRLVNHPT 759
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ F GV +V+ AD +IEK + + V V TSD ++Q G GA + S
Sbjct: 760 EVQNFAGVYVVYTKTAETADQYIEKTTHEMIKK--YDVTVATSDGIEQIIIRGKGAILIS 817
Query: 163 SKALVSEV 170
++ + ++
Sbjct: 818 AREFLKDL 825
>gi|333980489|ref|YP_004518434.1| hypothetical protein Desku_3139 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333823970|gb|AEG16633.1| protein of unknown function DUF901 [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 170
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L+VDGYN+ WP+LE + L+ AR +L++ LV ++ VVVVFDA
Sbjct: 5 LIVDGYNIIHAWPELEQ-LSESSLEHARTRLVDILVNYAAFTGEHVVVVFDAHQVKHGGD 63
Query: 105 KEEFI-GVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ E + GV +++ P ADA IEK + L G V+V T D +Q G GA+ +
Sbjct: 64 RSETVDGVQVIYTPEGETADAVIEKLVGELSRRGT--VYVATYDWAEQRMILGRGAYRIT 121
Query: 163 SKALVSEVS 171
+ L +V
Sbjct: 122 PRELWKKVQ 130
>gi|392988352|ref|YP_006486945.1| hypothetical protein EHR_05505 [Enterococcus hirae ATCC 9790]
gi|392335772|gb|AFM70054.1| hypothetical protein EHR_05505 [Enterococcus hirae ATCC 9790]
Length = 176
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L+VDGYN+ G WP+L + ++ AR+ L+ L ++ ++V+VVFDA L+ G+
Sbjct: 5 LLIVDGYNMIGSWPELVLLKKQEKMADAREALLHRLSNYAKYEGIEVIVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +++ +++VF E AD++IE+ I D +V V TSD +Q + GA
Sbjct: 65 QNYKKY-QLEVVFTKEDETADSYIER-IAGQLNDRLTQVTVATSDLAEQWMIFSQGALRT 122
Query: 162 SS 163
S+
Sbjct: 123 SA 124
>gi|317498025|ref|ZP_07956329.1| elongation factor G [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894701|gb|EFV16879.1| elongation factor G [Lachnospiraceae bacterium 5_1_63FAA]
Length = 677
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL- 97
D + LLVDGYN+ W L+ + +D AR KL++E+ + ++ ++++VVFDA
Sbjct: 510 DMSKKYLLVDGYNIIYAWDDLKE-LLDTNVDAARGKLLDEMSNYQGMKGMELIVVFDAYR 568
Query: 98 MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGA 156
+ G T +++ + +V+ E AD +IEK A V V TSD L+Q G
Sbjct: 569 VKGHETEITDYMNIHVVYTKEAETADQYIEK--FAHSHGRKYDVTVATSDGLEQIIIRGQ 626
Query: 157 GAFVWSSKAL 166
G + S++ L
Sbjct: 627 GCRLLSAREL 636
>gi|260887694|ref|ZP_05898957.1| putative tetracycline resistance protein [Selenomonas sputigena
ATCC 35185]
gi|330838633|ref|YP_004413213.1| hypothetical protein Selsp_0787 [Selenomonas sputigena ATCC 35185]
gi|260862574|gb|EEX77074.1| putative tetracycline resistance protein [Selenomonas sputigena
ATCC 35185]
gi|329746397|gb|AEB99753.1| protein of unknown function DUF901 [Selenomonas sputigena ATCC
35185]
Length = 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
++DGYNV P+L + G L AR +L+ L+E+ + + VVFDAL + H
Sbjct: 8 FIIDGYNVIHALPELAS--CAGDLAEARDRLLHLLMEYGAYEKYDMTVVFDALFASGEEH 65
Query: 105 KEEFI-GVDIVFPGE-TCADAWIEK----EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
+E+ ++++ GE AD+ IE+ + RE V VVTSD +Q A GAGA
Sbjct: 66 REQVAPHFEVIYTGEGVTADSCIERLAYESVRTSRE-----VHVVTSDGAEQSAILGAGA 120
Query: 159 FVWSSKAL 166
+ SS L
Sbjct: 121 YRISSTEL 128
>gi|429763876|ref|ZP_19296213.1| putative translation elongation factor G [Anaerostipes hadrus DSM
3319]
gi|429177535|gb|EKY18852.1| putative translation elongation factor G [Anaerostipes hadrus DSM
3319]
Length = 880
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL- 97
D + LLVDGYN+ W L+ + +D AR KL++E+ + ++ ++++VVFDA
Sbjct: 713 DMSKKYLLVDGYNIIYAWDDLK-ELLDTNVDAARGKLLDEMSNYQGMKGMELIVVFDAYR 771
Query: 98 MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGA 156
+ G T +++ + +V+ E AD +IEK A V V TSD L+Q G
Sbjct: 772 VKGHETEITDYMNIHVVYTKEAETADQYIEK--FAHTHGRKYDVTVATSDGLEQIIIRGQ 829
Query: 157 GAFVWSSKAL 166
G + S++ L
Sbjct: 830 GCRLLSAREL 839
>gi|167766088|ref|ZP_02438141.1| hypothetical protein CLOSS21_00581 [Clostridium sp. SS2/1]
gi|167712168|gb|EDS22747.1| putative translation elongation factor G [Clostridium sp. SS2/1]
gi|291560036|emb|CBL38836.1| small GTP-binding protein domain [butyrate-producing bacterium
SSC/2]
Length = 880
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL- 97
D + LLVDGYN+ W L+ + +D AR KL++E+ + ++ ++++VVFDA
Sbjct: 713 DMSKKYLLVDGYNIIYAWDDLKE-LLDTNVDAARGKLLDEMSNYQGMKGMELIVVFDAYR 771
Query: 98 MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGA 156
+ G T +++ + +V+ E AD +IEK A V V TSD L+Q G
Sbjct: 772 VKGHETEITDYMNIHVVYTKEAETADQYIEK--FAHTHGRKYDVTVATSDGLEQIIIRGQ 829
Query: 157 GAFVWSSKAL 166
G + S++ L
Sbjct: 830 GCRLLSAREL 839
>gi|392530512|ref|ZP_10277649.1| hypothetical protein CmalA3_07397 [Carnobacterium maltaromaticum
ATCC 35586]
gi|414085691|ref|YP_006994405.1| hypothetical protein BN424_3685 [Carnobacterium maltaromaticum
LMA28]
gi|412999281|emb|CCO13090.1| conserved hypothetical protein [Carnobacterium maltaromaticum
LMA28]
Length = 180
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+L++DGYN+ G WP+L + +++ AR L+ +L + +++ VVFDA L+ G+
Sbjct: 5 LLIIDGYNMIGAWPELVKLKDQDQMEDARDSLLHQLSNYQRYEGIEIWVVFDAQLVPGIQ 64
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ + V ++F E AD++IE+ IV+ + + +V V TSD +Q + GA
Sbjct: 65 KSYQRYT-VTVIFTKEGETADSFIER-IVSEKNNRLTQVTVATSDLAEQWLVFSRGALRK 122
Query: 162 SSKALVSEV 170
S+ L ++
Sbjct: 123 SANELYKDL 131
>gi|195978846|ref|YP_002124090.1| hypothetical protein Sez_1750 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225871258|ref|YP_002747205.1| hypothetical protein SEQ_1988 [Streptococcus equi subsp. equi 4047]
gi|195975551|gb|ACG63077.1| hypothetical protein Sez_1750 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225700662|emb|CAW95239.1| conserved hypothetical protein [Streptococcus equi subsp. equi
4047]
Length = 172
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W F +LD AR+ L+ +L ++ + ++ VFDA + GL
Sbjct: 5 LLLVDGYNMIAFWESTRQFFKTNQLDQARRILLNKLNNYAHFDDSDIICVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ I E AD++IE+ L V V TSD +Q + GA +
Sbjct: 65 QRYDQYRISVIFTEEEETADSYIERTAAELNT-ALTMVEVATSDLNEQWTIFSQGALRVT 123
Query: 163 SKALVSEVSLI 173
+K L V+ +
Sbjct: 124 AKELEQRVNAV 134
>gi|390934104|ref|YP_006391609.1| hypothetical protein Tsac_0994 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569605|gb|AFK86010.1| protein of unknown function DUF901 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 164
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS-GLPT 103
+++DGYNV W L+ + L+ ARQKLI+ L F +++VFDA+ + G
Sbjct: 3 MVIDGYNVINNWEDLKLE-ARNNLEDARQKLIDILQNFRGYTGFNIILVFDAMYAKGKQQ 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIE---KEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+KE GV++V+ E AD++IE KEIV KV VVTSD + Q G GA
Sbjct: 62 NKEYHNGVEVVYTKEGESADSYIEGLIKEIVK-----KDKVVVVTSDWILQQVVLGQGAI 116
Query: 160 VWSSKALVSEVS 171
SS+ L E++
Sbjct: 117 RMSSRELYEELN 128
>gi|225405491|ref|ZP_03760680.1| hypothetical protein CLOSTASPAR_04711, partial [Clostridium
asparagiforme DSM 15981]
gi|225042979|gb|EEG53225.1| hypothetical protein CLOSTASPAR_04711 [Clostridium asparagiforme
DSM 15981]
Length = 201
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ WP+L+ LD AR KL + L + ++ +V++VFD + G P
Sbjct: 14 LLVDGYNIIFAWPELK-ELADVNLDGARTKLQDILCNYQGYKKCQVILVFDGYKVKGNPG 72
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + ++F E AD +IEK V + +V V TSD L+Q G GA S
Sbjct: 73 EVIRYHNIHVIFTKEAETADQYIEK--VTQQIGRRYQVAVATSDKLEQVIILGKGALRLS 130
Query: 163 SKALVSEVS 171
++ L E+
Sbjct: 131 ARDLQKEIK 139
>gi|225867832|ref|YP_002743780.1| hypothetical protein SZO_02190 [Streptococcus equi subsp.
zooepidemicus]
gi|414564851|ref|YP_006043812.1| conserved hypothetical protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|225701108|emb|CAW97956.1| conserved hypothetical protein [Streptococcus equi subsp.
zooepidemicus]
gi|338847916|gb|AEJ26128.1| conserved hypothetical protein [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 172
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W F +LD AR+ L+ +L ++ + ++ VFDA + GL
Sbjct: 5 LLLVDGYNMIAFWESTRQFFKTNQLDQARRILLNKLNNYAHFDDSDIICVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ I E AD++IE+ L V V TSD +Q + GA +
Sbjct: 65 QRYDQYRISVIFTEEEETADSYIERTAAELNT-ALTMVEVATSDLNEQWTIFSQGALRVT 123
Query: 163 SKALVSEVSLI 173
+K L V+ +
Sbjct: 124 AKELEQRVNAV 134
>gi|126659517|ref|ZP_01730649.1| hypothetical protein CY0110_13893 [Cyanothece sp. CCY0110]
gi|126619156|gb|EAZ89893.1| hypothetical protein CY0110_13893 [Cyanothece sp. CCY0110]
Length = 177
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
P+LLVDGYN+ G W L++ + L+ AR +L+E L+ +++ + K VVFD+
Sbjct: 6 TPLLLVDGYNIIGSWSPLKSTRDRHGLEQARYELVETLINYTVHKGYKTQVVFDSQYQKT 65
Query: 102 PTHKEEF-IGVDIVFPGET-CADAWIEKEIVAL---REDGCPKVWVVTSDHLQQHAAYGA 156
P+ E + I F T AD +IE+ ++ ++ V TSD Q A G
Sbjct: 66 PSSVEHHSTHLSICFTAWTQTADTYIERVCATFFRRQQINHNRIIVATSDRDQYLTAMGY 125
Query: 157 GAFVWSSKALVSEV 170
GA S + L ++
Sbjct: 126 GAEWMSVEVLAKDI 139
>gi|347524906|ref|YP_004831654.1| hypothetical protein LRC_04030 [Lactobacillus ruminis ATCC 27782]
gi|345283865|gb|AEN77718.1| Conserved Hypothetical protein [Lactobacillus ruminis ATCC 27782]
Length = 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YN+ G WP+L RL+ AR +L+ L ++ + K++VVFDA+ + GL
Sbjct: 5 ILIVDAYNMIGNWPELARLKKSDRLEDARDQLLLILSDYHKQSDSKIIVVFDAMYVPGLS 64
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+++ +D+V+ E AD++IE + + +V V TSD +Q + GA
Sbjct: 65 KSYKQY-NLDVVWTDEGQTADSYIEA-LAGKLQSRLTQVTVATSDQAEQWTIFSQGAL 120
>gi|365840761|ref|ZP_09381938.1| hypothetical protein HMPREF0080_01892 [Anaeroglobus geminatus
F0357]
gi|364560504|gb|EHM38438.1| hypothetical protein HMPREF0080_01892 [Anaeroglobus geminatus
F0357]
Length = 175
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
VDGYN+ W L+ L+ ARQKLI+ L + I+ +++V+VFDA+ + K
Sbjct: 6 FVDGYNIIFAWDPLKK-LADESLEHARQKLIDILTGYGKIKGIELVLVFDAMYTD-EAAK 63
Query: 106 EEFIGVD---IVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EE IG D + E AD+ IE+ + R ++V TSD +Q G+GA S
Sbjct: 64 EEKIGGDCTVVYTDKEETADSRIERLVYEQRH-RRRSIYVATSDGTEQLQVLGSGANRVS 122
Query: 163 SKALVSEV 170
++ L +V
Sbjct: 123 ARELADDV 130
>gi|323339373|ref|ZP_08079658.1| PIN domain containing protein [Lactobacillus ruminis ATCC 25644]
gi|417972451|ref|ZP_12613352.1| hypothetical protein ANHS_30 [Lactobacillus ruminis ATCC 25644]
gi|323093196|gb|EFZ35783.1| PIN domain containing protein [Lactobacillus ruminis ATCC 25644]
gi|346331171|gb|EGX99389.1| hypothetical protein ANHS_30 [Lactobacillus ruminis ATCC 25644]
Length = 176
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YN+ G WP+L RL+ AR +L+ L ++ + K++VVFDA+ + GL
Sbjct: 5 ILIVDAYNMIGNWPELARLKKSDRLEDARDQLLLILSDYHKQSDSKIIVVFDAMYVPGLS 64
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+++ +D+V+ E AD++IE + + +V V TSD +Q + GA
Sbjct: 65 KSYKQY-SLDVVWTDEGQTADSYIE-ALAGKLQSRLTQVTVATSDQAEQWTIFSQGAL 120
>gi|303271065|ref|XP_003054894.1| hypothetical protein MICPUCDRAFT_50058 [Micromonas pusilla
CCMP1545]
gi|226462868|gb|EEH60146.1| hypothetical protein MICPUCDRAFT_50058 [Micromonas pusilla
CCMP1545]
Length = 466
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 6 TSYRRKKVE--KEELPEDTEL----YRFFSYIYNTNQGIDNAVPVLLVDGYNVCG----- 54
T +R+ K E +EEL R + + + G A PVLLVDGYNVCG
Sbjct: 146 TGFRKTKDEAYQEELARRRAAKQAEARHLASLKSHPLGARGAPPVLLVDGYNVCGCDEGE 205
Query: 55 -YWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK--EEFIGV 111
L+ F++G L+ AR++L+EEL + + +VVVVFDA T + GV
Sbjct: 206 ERGLPLKKLFLEGDLERARRELVEELENLAAHKGYRVVVVFDADRRDGATDAATKTKSGV 265
Query: 112 DIVFPGETCADAWIEK 127
V+ AD+WIE+
Sbjct: 266 WEVYSVSNDADSWIER 281
>gi|21911204|ref|NP_665472.1| hypothetical protein SpyM3_1668 [Streptococcus pyogenes MGAS315]
gi|28896581|ref|NP_802931.1| hypothetical protein SPs1669 [Streptococcus pyogenes SSI-1]
gi|50915005|ref|YP_060977.1| cytoplasmic protein [Streptococcus pyogenes MGAS10394]
gi|94995141|ref|YP_603239.1| hypothetical protein MGAS10750_Spy1745 [Streptococcus pyogenes
MGAS10750]
gi|21905416|gb|AAM80275.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28811835|dbj|BAC64764.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|50904079|gb|AAT87794.1| Hypothetical cytosolic protein [Streptococcus pyogenes MGAS10394]
gi|94548649|gb|ABF38695.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
Length = 172
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W F +LD AR L+ +L ++ + ++ VFDA + GL
Sbjct: 5 ILLVDGYNMIAFWQSTRQLFKTNQLDQARNTLLTKLNHYAHFENINIICVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+++ + +VF E AD++IE+ + A V V TSD +Q + GA
Sbjct: 65 QRYDQYY-ISVVFTEEDETADSYIER-MAAELNTAIHMVEVATSDLNEQWTIFSQGALRV 122
Query: 162 SSKALVSEVSLI 173
+++ L V +
Sbjct: 123 TARELEQRVHTV 134
>gi|266619762|ref|ZP_06112697.1| elongation factor G [Clostridium hathewayi DSM 13479]
gi|288868666|gb|EFD00965.1| elongation factor G [Clostridium hathewayi DSM 13479]
Length = 891
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 20/155 (12%)
Query: 35 NQGIDNAVPV-------------LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVE 81
N+ N+VPV LLVDGYN+ W +L+ + +D AR KL++ L
Sbjct: 702 NREKSNSVPVVRTYKKEAPREEYLLVDGYNIIFAWDELKE-LAEHTIDGARGKLLDILCN 760
Query: 82 FSMIREVKVVVVFDAL-MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP- 138
+ +++ +++ VFDA + G T ++ + +V+ E AD +IEK E+G
Sbjct: 761 YQGMKKCRLIAVFDAYRVQGHVTECLDYHNIRVVYTKEAETADQYIEK---FAHENGRKY 817
Query: 139 KVWVVTSDHLQQHAAYGAGAFVWSSKALVSEVSLI 173
V V TSDHL+Q +G G + S++ L E+S +
Sbjct: 818 DVTVATSDHLEQIIIHGQGCRLISARELKEEISRL 852
>gi|253579768|ref|ZP_04857036.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848767|gb|EES76729.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 900
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 29 SYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREV 88
SY N++ LLVDGYN+ W L+ L A+ KL++ L + ++
Sbjct: 719 SYYRNSSSAKKKEKEYLLVDGYNIIYAWEDLKE-LADANLHAAQTKLMDILSNYQGFKKC 777
Query: 89 KVVVVFDALMSGLPTHKEEFI---GVDIVFPGET-CADAWIEKEIVAL-REDGCPKVWVV 143
+++VFDA + H EE I + +V+ E AD +IEK + + RE+ +V V
Sbjct: 778 TLILVFDAYK--IEGHAEEVITYHNIHVVYTKEAETADQYIEKTVHKIGREN---QVTVA 832
Query: 144 TSDHLQQHAAYGAGAFVWSSKALVSEV 170
TSD L+Q G GA S++ L E+
Sbjct: 833 TSDGLEQIIIMGQGAHRMSARGLRDEI 859
>gi|403385686|ref|ZP_10927743.1| hypothetical protein KJC30_13360 [Kurthia sp. JC30]
Length = 176
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VDGYN+ G W +L+ +L AR +LIE L EF + ++VVFDA + G+
Sbjct: 4 ILIVDGYNMIGDWEELKQLKDNHQLIDARDRLIELLAEFQAYSQYTIIVVFDAYQVPGIA 63
Query: 103 THKEEFIGVDIVFPG-ETCADAWIEKEIVALREDGCPK------VWVVTSDHLQQHAAYG 155
T KE+ +DI++ + AD IE AL D K + V TSD +Q +G
Sbjct: 64 T-KEKQHAIDIIYTRVKETADECIE----ALTMDKIHKYGRLTRITVATSDMAEQSVIFG 118
Query: 156 AGAFVWSSKALVSEV 170
GA + L + V
Sbjct: 119 NGALRMPASELHTAV 133
>gi|392947835|ref|ZP_10313459.1| nuclease, NYN_YacP family [Lactobacillus pentosus KCA1]
gi|392436932|gb|EIW14832.1| nuclease, NYN_YacP family [Lactobacillus pentosus KCA1]
Length = 181
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP+L + RL AR +LI L E+ I + + +VFDA+ +P
Sbjct: 5 LLIVDAYNMIGNWPELNHLKQTDRLPQARDELISMLTEYKKITGLNISLVFDAMY--VPG 62
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + + D+ + AD++IEK A ++ +V V TSD +Q + GA
Sbjct: 63 NSKSYRQADLEIIWTSKDQTADSYIEK-YAAEKQSRVLQVTVATSDQAEQWVIFSEGAL 120
>gi|334881836|emb|CCB82746.1| putative uncharacterized protein lp_0613 [Lactobacillus pentosus
MP-10]
gi|339637563|emb|CCC16499.1| putative uncharacterized protein lp_0613 [Lactobacillus pentosus
IG1]
Length = 181
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP+L + RL AR +LI L E+ I + + +VFDA+ +P
Sbjct: 5 LLIVDAYNMIGNWPELNHLKQTDRLPQARDELISMLTEYKKITGLNISLVFDAMY--VPG 62
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + + D+ + AD++IEK A ++ +V V TSD +Q + GA
Sbjct: 63 NSKSYRQADLEIIWTSKDQTADSYIEK-YAAEKQSRVLQVTVATSDQAEQWVIFSEGAL 120
>gi|342215236|ref|ZP_08707890.1| hypothetical protein HMPREF9200_0208 [Veillonella sp. oral taxon
780 str. F0422]
gi|341588733|gb|EGS32109.1| hypothetical protein HMPREF9200_0208 [Veillonella sp. oral taxon
780 str. F0422]
Length = 178
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYNV W L++ K L+ AR +L L+ + + K+++VFD +
Sbjct: 4 DILIVDGYNVIFDWADLKS-LSKESLEHARLELRHRLLNYGTYKGYKIILVFDGKHAPF- 61
Query: 103 THKEEFIGVDI--VFPG-ETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
T E+ I D VF G ADA+IE+E+ + ++ ++VVTSD +Q G G
Sbjct: 62 TADEQRISADFIEVFTGTHETADAYIEREVFS-KKGQYKTIYVVTSDGEEQSQILGFGGL 120
Query: 160 VWSSKALVSEVSL 172
S++ L ++ L
Sbjct: 121 RISARELRHQIDL 133
>gi|340397954|ref|YP_004726979.1| hypothetical protein SALIVB_0121 [Streptococcus salivarius CCHSS3]
gi|387762182|ref|YP_006069159.1| hypothetical protein Ssal_02081 [Streptococcus salivarius 57.I]
gi|418016974|ref|ZP_12656533.1| hypothetical protein SSALIVM18_00400 [Streptococcus salivarius M18]
gi|338741947|emb|CCB92452.1| hypothetical protein SALIVB_0121 [Streptococcus salivarius CCHSS3]
gi|339292949|gb|AEJ54296.1| conserved hypothetical protein [Streptococcus salivarius 57.I]
gi|345527667|gb|EGX30975.1| hypothetical protein SSALIVM18_00400 [Streptococcus salivarius M18]
Length = 171
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F +LD AR+ L+ +L ++ + ++ VFDA
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKTNQLDQARETLLRKLNHYANFEHIDIICVFDAQFVPGSR 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + + ++F E AD++IE+ + V V TSD +Q A + GA S
Sbjct: 65 QRYDQYRISVIFTEEDETADSYIERAAAEMNT-VQNLVEVATSDLNEQWAIFSQGALRVS 123
Query: 163 SKALVSEVSLI 173
++ L V+ +
Sbjct: 124 ARELEERVNTV 134
>gi|15675740|ref|NP_269914.1| hypothetical protein SPy_1937 [Streptococcus pyogenes SF370]
gi|19746850|ref|NP_607986.1| hypothetical protein spyM18_2004 [Streptococcus pyogenes MGAS8232]
gi|56807804|ref|ZP_00365653.1| COG3688: Predicted RNA-binding protein containing a PIN domain
[Streptococcus pyogenes M49 591]
gi|71911464|ref|YP_283014.1| hypothetical protein M5005_Spy_1651 [Streptococcus pyogenes
MGAS5005]
gi|94989282|ref|YP_597383.1| cytoplasmic protein [Streptococcus pyogenes MGAS9429]
gi|94993171|ref|YP_601270.1| putative cytoplasmic protein [Streptococcus pyogenes MGAS2096]
gi|306826621|ref|ZP_07459926.1| protein of hypothetical function DUF901 [Streptococcus pyogenes
ATCC 10782]
gi|383480614|ref|YP_005389508.1| hypothetical protein MGAS15252_1498 [Streptococcus pyogenes
MGAS15252]
gi|383494596|ref|YP_005412272.1| hypothetical protein MGAS1882_1559 [Streptococcus pyogenes
MGAS1882]
gi|410681312|ref|YP_006933714.1| hypothetical protein A20_1700c [Streptococcus pyogenes A20]
gi|417856104|ref|ZP_12501163.1| hypothetical protein SPYOHK_01170 [Streptococcus pyogenes HKU
QMH11M0907901]
gi|421893019|ref|ZP_16323599.1| Hypothetical protein DUF901, similar to C-terminal domain of
ribosome protection-type Tc-resistance proteins
[Streptococcus pyogenes NS88.2]
gi|13622960|gb|AAK34635.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|19749090|gb|AAL98485.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|71854246|gb|AAZ52269.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS5005]
gi|94542790|gb|ABF32839.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS9429]
gi|94544736|gb|ABF34784.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10270]
gi|94546679|gb|ABF36726.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS2096]
gi|304431199|gb|EFM34203.1| protein of hypothetical function DUF901 [Streptococcus pyogenes
ATCC 10782]
gi|378928604|gb|AFC66810.1| hypothetical protein MGAS15252_1498 [Streptococcus pyogenes
MGAS15252]
gi|378930323|gb|AFC68740.1| hypothetical protein MGAS1882_1559 [Streptococcus pyogenes
MGAS1882]
gi|379981213|emb|CCG27321.1| Hypothetical protein DUF901, similar to C-terminal domain of
ribosome protection-type Tc-resistance proteins
[Streptococcus pyogenes NS88.2]
gi|387933059|gb|EIK41172.1| hypothetical protein SPYOHK_01170 [Streptococcus pyogenes HKU
QMH11M0907901]
gi|395453286|dbj|BAM29625.1| hypothetical protein M1GAS476_0285 [Streptococcus pyogenes M1 476]
gi|409693901|gb|AFV38761.1| hypothetical protein A20_1700c [Streptococcus pyogenes A20]
Length = 172
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W F +LD AR L+ +L ++ + ++ VFDA + GL
Sbjct: 5 ILLVDGYNMIAFWQSTRQLFKTNQLDQARNTLLTKLNHYAHFENINIICVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+++ + +VF E AD++IE+ + A V V TSD +Q + GA
Sbjct: 65 QRYDQYY-ISVVFTEEDETADSYIER-MAAELNTAIHMVEVATSDLNEQWTIFSQGALRV 122
Query: 162 SSKALVSEVSLI 173
+++ L V +
Sbjct: 123 TARELEQRVHTV 134
>gi|393198922|ref|YP_006460764.1| RNA-binding protein [Solibacillus silvestris StLB046]
gi|406666947|ref|ZP_11074710.1| putative RNA-binding protein containing a PIN domain protein
[Bacillus isronensis B3W22]
gi|327438253|dbj|BAK14618.1| predicted RNA-binding protein containing a PIN domain [Solibacillus
silvestris StLB046]
gi|405385230|gb|EKB44666.1| putative RNA-binding protein containing a PIN domain protein
[Bacillus isronensis B3W22]
Length = 170
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 44 VLLVDGYNVCGYWPKL----ENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS 99
+LLVDGYN+ G W +L E HF + AR +LIE + E+ +V+VVFDA +
Sbjct: 4 ILLVDGYNMIGAWSELRPLREPHF-----EDARDRLIERMAEYKAHTGWRVIVVFDAHL- 57
Query: 100 GLPTHKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGA 156
+P ++ +I V++++ + AD IEK L+ ++ V TSD +Q+ +G
Sbjct: 58 -VPGTEQLYIQHAVEVLYTRKNETADERIEKLSNELKGRKI-QIHVATSDMTEQNVVFGH 115
Query: 157 GAFVWSSKALVSEVSLI 173
GA S++ L E+ +I
Sbjct: 116 GALRKSARELEIEMQII 132
>gi|218290033|ref|ZP_03494200.1| protein of unknown function DUF901 [Alicyclobacillus acidocaldarius
LAA1]
gi|218239867|gb|EED07055.1| protein of unknown function DUF901 [Alicyclobacillus acidocaldarius
LAA1]
Length = 180
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+++VDGYNV I+ L+ AR+++ + L ++ + V+VV+DA P
Sbjct: 15 LVIVDGYNVIARRAGRSLAQIED-LEEARREMEDLLSQYRAMYGEDVIVVYDAHRRPGPG 73
Query: 104 HKEEFIGVDIVF--PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+EE GV IVF GET ADA IE+ + LR D ++ V TSD +Q A G GA
Sbjct: 74 REEEQAGVRIVFTESGET-ADARIERLVYDLR-DEYREITVATSDAAEQQVALGGGALRI 131
Query: 162 SSKALV 167
S+ L+
Sbjct: 132 SANELL 137
>gi|227501073|ref|ZP_03931122.1| DNA-directed RNA polymerase, alpha subunit [Anaerococcus tetradius
ATCC 35098]
gi|227216846|gb|EEI82244.1| DNA-directed RNA polymerase, alpha subunit [Anaerococcus tetradius
ATCC 35098]
Length = 176
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+ +DGYNV W +L+ K L AR KLIEEL E+ + ++V+VFDA L
Sbjct: 8 ISFIDGYNVINKWGELK-ELSKVNLADARDKLIEELAEYKSLSGEEIVIVFDAY--NLDR 64
Query: 104 HKEEFI---GVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
KE I + IVF AD++IE+++ + D + VVT D Q A GA
Sbjct: 65 IKETVIEKYAMKIVFTKRFQTADSFIERQLAKI--DTYNNIKVVTDDGAVQTQATSKGAI 122
Query: 160 VWSSKALVSEVSLI 173
++ L +E++ +
Sbjct: 123 RVTALELRAELNTL 136
>gi|404330432|ref|ZP_10970880.1| hypothetical protein SvinD2_10072 [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 171
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYNV G W L++ + + AR LI+++ E+ + +V+V+FDA +
Sbjct: 4 ILIVDGYNVIGAWSNLKS-LKQKEFENARDYLIDKMAEYQAVTGWRVIVIFDAYLIPGQE 62
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
K +++++ ++ AD IE I L+ + ++ V TSD +Q A + GA
Sbjct: 63 IKTRKSNIEVIYTKKSEKADQKIEGLIRKLK-NVKTRIHVATSDMAEQWAVFSQGALRKP 121
Query: 163 SKALVSEVSLI 173
S+ L+ E+ I
Sbjct: 122 SRELIDEIKRI 132
>gi|335998618|ref|ZP_08564527.1| protein of hypothetical function DUF901 [Lactobacillus ruminis
SPM0211]
gi|335348017|gb|EGM49526.1| protein of hypothetical function DUF901 [Lactobacillus ruminis
SPM0211]
Length = 176
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YN+ G WP+L RL+ AR +L+ L ++ + K++VVFDA+ + GL
Sbjct: 5 ILIVDAYNMIGNWPELARLKKADRLEDARDQLLLILSDYHKQSDSKIIVVFDAMYVPGLS 64
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+++ +D+V+ E AD++IE + + +V V TSD +Q + GA
Sbjct: 65 KSYKQY-SLDVVWTDEGQTADSYIE-ALAGKLQSRLTQVTVATSDQAEQWTIFSQGAL 120
>gi|387783226|ref|YP_006069309.1| hypothetical protein SALIVA_0110 [Streptococcus salivarius JIM8777]
gi|421451481|ref|ZP_15900842.1| putative cytosolic protein [Streptococcus salivarius K12]
gi|338744108|emb|CCB94474.1| uncharacterized protein [Streptococcus salivarius JIM8777]
gi|400181912|gb|EJO16174.1| putative cytosolic protein [Streptococcus salivarius K12]
Length = 171
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F +LD AR+ L+ +L ++ + ++ VFDA
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKTNQLDEARETLLRKLNHYANFEHIDIICVFDAQFVPGSR 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + + ++F E AD++IE+ + V V TSD +Q A + GA S
Sbjct: 65 QRYDQYRISVIFTEEDETADSYIERAAAEMNT-VQNLVEVATSDLNEQWAIFSQGALRVS 123
Query: 163 SKALVSEVSLI 173
++ L V+ +
Sbjct: 124 ARELEERVNTV 134
>gi|18311405|ref|NP_563339.1| hypothetical protein CPE2423 [Clostridium perfringens str. 13]
gi|110799360|ref|YP_697112.1| hypothetical protein CPF_2733 [Clostridium perfringens ATCC 13124]
gi|110803475|ref|YP_699681.1| hypothetical protein CPR_2419 [Clostridium perfringens SM101]
gi|168206817|ref|ZP_02632822.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
gi|168211255|ref|ZP_02636880.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|168214712|ref|ZP_02640337.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
gi|168217916|ref|ZP_02643541.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|182626983|ref|ZP_02954713.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|422347487|ref|ZP_16428399.1| hypothetical protein HMPREF9476_02472 [Clostridium perfringens
WAL-14572]
gi|422875368|ref|ZP_16921853.1| hypothetical protein HA1_14147 [Clostridium perfringens F262]
gi|18146089|dbj|BAB82129.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|110674007|gb|ABG82994.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
gi|110683976|gb|ABG87346.1| conserved hypothetical protein [Clostridium perfringens SM101]
gi|170661752|gb|EDT14435.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
gi|170710759|gb|EDT22941.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
3626]
gi|170713839|gb|EDT26021.1| conserved hypothetical protein [Clostridium perfringens CPE str.
F4969]
gi|177907653|gb|EDT70277.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|182380027|gb|EDT77506.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
gi|373223941|gb|EHP46282.1| hypothetical protein HMPREF9476_02472 [Clostridium perfringens
WAL-14572]
gi|380303637|gb|EIA15936.1| hypothetical protein HA1_14147 [Clostridium perfringens F262]
Length = 169
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ V+ +DGYNV WP L+ D+AR +L E L ++ K+ +VFDA ++G
Sbjct: 1 MRVIFIDGYNVINSWPNLKKS-KNYSYDIARTELTEMLENYAAFNSCKIYLVFDAHKVAG 59
Query: 101 LPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
KE + VF E ADA+IE+ + L ++ VVTSD L+Q + GA
Sbjct: 60 NIESKELSGNIITVFTKEGEIADAYIERMVDELGRK--VEIVVVTSDRLEQQTIFQRGAV 117
Query: 160 VWSSKALVSEV 170
SS +EV
Sbjct: 118 RMSSIEFYNEV 128
>gi|429735345|ref|ZP_19269313.1| hypothetical protein HMPREF9163_00153 [Selenomonas sp. oral taxon
138 str. F0429]
gi|429159156|gb|EKY01674.1| hypothetical protein HMPREF9163_00153 [Selenomonas sp. oral taxon
138 str. F0429]
Length = 177
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
L+DGYNV WP+L ++G LD AR L+ L E+ ++ +VFDA + H+
Sbjct: 11 LIDGYNVINAWPELIR--LRGNLDEARDVLVHILTEYGAFENYEMTIVFDAFFTEDEEHE 68
Query: 106 EEFIG-VDIVFPGE-TCADAWIEK-EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + +++ G AD+ IE+ A+R +V VVTSD +Q GAGA+ +
Sbjct: 69 LQVTDRMKVIYTGAGETADSCIERLAYTAVR--AGREVHVVTSDGAEQSVILGAGAYRIT 126
Query: 163 SKALVSEV 170
S L V
Sbjct: 127 SPELRRSV 134
>gi|401564275|ref|ZP_10805179.1| YacP-like NYN domain protein [Selenomonas sp. FOBRC6]
gi|400188992|gb|EJO23117.1| YacP-like NYN domain protein [Selenomonas sp. FOBRC6]
Length = 177
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
V L+DGYNV WP+L ++G LD AR L+ L E+ ++ +VFDA +
Sbjct: 7 VEYYLIDGYNVINAWPELIR--LRGNLDEARDVLVHILTEYGAFENYEMTIVFDAFFTED 64
Query: 102 PTHKEEFIG-VDIVFPGE-TCADAWIEK-EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
H+ + + +++ G AD+ IE+ A+R +V VVTSD +Q GAGA
Sbjct: 65 EEHELQVTDRMKVIYTGAGETADSCIERLAYTAVR--AGREVHVVTSDGAEQSVILGAGA 122
Query: 159 FVWSSKALVSEVS 171
+ +S L V
Sbjct: 123 YRITSPELRRSVK 135
>gi|375089266|ref|ZP_09735597.1| hypothetical protein HMPREF9703_01679 [Dolosigranulum pigrum ATCC
51524]
gi|374560432|gb|EHR31801.1| hypothetical protein HMPREF9703_01679 [Dolosigranulum pigrum ATCC
51524]
Length = 180
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L VDGYN+ G WP L+ + + AR +L+ EL + ++V+VVFDA + T
Sbjct: 5 ILYVDGYNMIGAWPNLKRLQQRDEIGTARDELLHELSNYGAFAGIEVIVVFDAQLVPGIT 64
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ E ++++F E AD +IE+ V V V TSD +Q + GA S
Sbjct: 65 QRYEQYDLEVIFTQEGETADEYIERS-VGEENFLVSNVKVATSDLAEQWMIFQRGATRKS 123
Query: 163 SKAL 166
+ L
Sbjct: 124 ANEL 127
>gi|322374193|ref|ZP_08048726.1| hypothetical cytosolic protein [Streptococcus sp. C150]
gi|321276898|gb|EFX53970.1| hypothetical cytosolic protein [Streptococcus sp. C150]
Length = 171
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F +LD AR+ L+ +L ++ + V+ VFDA
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKTNQLDEARETLLRKLNHYANFEHIDVICVFDAQFVPGTR 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + + ++F E AD++IE+ + V V TSD +Q A + GA S
Sbjct: 65 QRYDQYRISVIFTEEDETADSYIERAAAEMNT-VQHLVEVATSDLNEQWAIFSQGALRVS 123
Query: 163 SKALVSEVSLI 173
++ L V+ +
Sbjct: 124 ARELEERVNTV 134
>gi|291523847|emb|CBK89434.1| small GTP-binding protein domain [Eubacterium rectale DSM 17629]
Length = 930
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L+VDGYN+ W L+ + +D AR L + L ++ + +++VFDA + G
Sbjct: 792 LIVDGYNIIFAWEDLKE-LSRINIDSARDALKDVLSDYQGYKGCHLLLVFDAYKVKGNAG 850
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+E F +++V+ + ADA+IEK + +R+ KV V TSD L+Q GA S
Sbjct: 851 KRETFHNIEVVYTKQDETADAFIEKTVFGIRDR--YKVTVATSDGLEQQTVMSLGALRMS 908
Query: 163 SKALVSEVSL 172
++ L + +
Sbjct: 909 ARELKEHIDM 918
>gi|228956534|ref|ZP_04118330.1| hypothetical protein bthur0005_800 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229107779|ref|ZP_04237415.1| hypothetical protein bcere0018_800 [Bacillus cereus Rock1-15]
gi|423632002|ref|ZP_17607748.1| hypothetical protein IK5_04851 [Bacillus cereus VD154]
gi|423645088|ref|ZP_17620704.1| hypothetical protein IK9_05031 [Bacillus cereus VD166]
gi|423646228|ref|ZP_17621798.1| hypothetical protein IKA_00015 [Bacillus cereus VD169]
gi|228675628|gb|EEL30836.1| hypothetical protein bcere0018_800 [Bacillus cereus Rock1-15]
gi|228803099|gb|EEM49921.1| hypothetical protein bthur0005_800 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|401262721|gb|EJR68859.1| hypothetical protein IK5_04851 [Bacillus cereus VD154]
gi|401267783|gb|EJR73839.1| hypothetical protein IK9_05031 [Bacillus cereus VD166]
gi|401287857|gb|EJR93624.1| hypothetical protein IKA_00015 [Bacillus cereus VD169]
Length = 170
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ +KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGIKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q +G GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFGQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|295103354|emb|CBL00898.1| small GTP-binding protein domain [Faecalibacterium prausnitzii
SL3/3]
Length = 860
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 32/189 (16%)
Query: 9 RRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAV--PV-------------------LLV 47
RR + L ED EL + F Y + A PV LLV
Sbjct: 664 RRAMAYRATLEEDAELLKIFERTYGPIKRDPLAAFRPVQKTERPDFAAEQWEIAPEYLLV 723
Query: 48 DGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPTHKE 106
DGYN+ W +L N K LD AR+KL++ L + ++ +++VFDA + G P E
Sbjct: 724 DGYNIIFAWDEL-NALAKESLDAARRKLMDILCNYQGYQKCVLILVFDAYRVPGSPGAIE 782
Query: 107 EFIGVDIVFPGET-CADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IE+ EI R +V V TSD ++Q G GA S
Sbjct: 783 QYHNIHVVYTKEAETADMFIERVTHEIGKSR-----RVRVATSDGMEQVIILGHGALRVS 837
Query: 163 SKALVSEVS 171
++ EV
Sbjct: 838 ARMFHEEVQ 846
>gi|291528683|emb|CBK94269.1| small GTP-binding protein domain [Eubacterium rectale M104/1]
Length = 930
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L+VDGYN+ W L+ + +D AR L + L ++ + +++VFDA + G
Sbjct: 792 LIVDGYNIIFAWEDLKE-LSRINIDSARDALKDVLSDYQGYKGCHLLLVFDAYKVKGNAG 850
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+E F +++V+ + ADA+IEK + +R+ KV V TSD L+Q GA S
Sbjct: 851 KRETFHNIEVVYTKQDETADAFIEKTVFGIRDR--YKVTVATSDGLEQQTVMSLGALRMS 908
Query: 163 SKALVSEVSL 172
++ L + +
Sbjct: 909 ARELKEHIDM 918
>gi|222152462|ref|YP_002561637.1| hypothetical protein SUB0274 [Streptococcus uberis 0140J]
gi|222113273|emb|CAR40804.1| conserved hypothetical protein [Streptococcus uberis 0140J]
Length = 171
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
LLVDGYN+ +W + F +LD AR L+ +L ++ ++++ VFDA + G+
Sbjct: 6 LLVDGYNMIAFWEETRQLFKTNQLDQARTVLLNKLNNYAHFEKIEITCVFDAQFVPGVRQ 65
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++++ + ++F E ADA+IE+ + A V V TSD +Q A + GA
Sbjct: 66 RYDQYM-ISVIFTEEDETADAYIER-MAAELNTSLNLVEVATSDLNEQWAIFSQGALRVP 123
Query: 163 SKALVSEVSLI 173
++ L V+ +
Sbjct: 124 ARELERRVNTV 134
>gi|160944562|ref|ZP_02091790.1| hypothetical protein FAEPRAM212_02076 [Faecalibacterium prausnitzii
M21/2]
gi|158444344|gb|EDP21348.1| putative translation elongation factor G [Faecalibacterium
prausnitzii M21/2]
Length = 860
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 32/189 (16%)
Query: 9 RRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAV--PV-------------------LLV 47
RR + L ED EL + F Y + A PV LLV
Sbjct: 664 RRAMAYRATLEEDAELLKIFERTYGPIKRDPLAAFRPVQKTERPDFAAEQWEIAPEYLLV 723
Query: 48 DGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPTHKE 106
DGYN+ W +L N K LD AR+KL++ L + ++ +++VFDA + G P E
Sbjct: 724 DGYNIIFAWDEL-NALAKESLDAARRKLMDILCNYQGYQKCVLILVFDAYRVPGSPGAIE 782
Query: 107 EFIGVDIVFPGET-CADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IE+ EI R +V V TSD ++Q G GA S
Sbjct: 783 QYHNIHVVYTKEAETADMFIERVTHEIGKSR-----RVRVATSDGMEQVIILGHGALRVS 837
Query: 163 SKALVSEVS 171
++ EV
Sbjct: 838 ARMFHEEVQ 846
>gi|363889064|ref|ZP_09316430.1| hypothetical protein HMPREF9628_01066 [Eubacteriaceae bacterium
CM5]
gi|363891934|ref|ZP_09319108.1| hypothetical protein HMPREF9630_01459 [Eubacteriaceae bacterium
CM2]
gi|363894201|ref|ZP_09321290.1| hypothetical protein HMPREF9629_01616 [Eubacteriaceae bacterium
ACC19a]
gi|402838912|ref|ZP_10887412.1| YacP-like NYN domain protein [Eubacteriaceae bacterium OBRC8]
gi|361962795|gb|EHL15902.1| hypothetical protein HMPREF9629_01616 [Eubacteriaceae bacterium
ACC19a]
gi|361964758|gb|EHL17769.1| hypothetical protein HMPREF9630_01459 [Eubacteriaceae bacterium
CM2]
gi|361967027|gb|EHL19893.1| hypothetical protein HMPREF9628_01066 [Eubacteriaceae bacterium
CM5]
gi|402271835|gb|EJU21069.1| YacP-like NYN domain protein [Eubacteriaceae bacterium OBRC8]
Length = 176
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGL 101
+L+VDGYNV W L+ + L+ AR+KL + E++ + K ++V+DA +
Sbjct: 6 KILIVDGYNVINAWEDLK-KLSEENLEYAREKLNYVISEYAQFKGYKTIIVYDAYKVKDS 64
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
T E+ ++IVF E AD +IE+ I L + V T D +Q G G
Sbjct: 65 VTRYEKIKNLEIVFTKEKETADTYIERYITELGPKKFLDITVATDDIAEQQVVSGKGGNR 124
Query: 161 WSSKALVSEVS 171
S++ L EV+
Sbjct: 125 ISTRQLYIEVN 135
>gi|238922970|ref|YP_002936483.1| translation elongation factor G [Eubacterium rectale ATCC 33656]
gi|238874642|gb|ACR74349.1| translation elongation factor G [Eubacterium rectale ATCC 33656]
Length = 930
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L+VDGYN+ W L+ + +D AR L + L ++ + +++VFDA + G
Sbjct: 792 LIVDGYNIIFAWEDLKE-LSRINIDSARDALKDVLSDYQGYKGCHLLLVFDAYKVKGNAG 850
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+E F +++V+ + ADA+IEK + +R+ KV V TSD L+Q GA S
Sbjct: 851 KRETFHNIEVVYTKQDETADAFIEKTVFGIRDR--YKVTVATSDGLEQQTVMSLGALRMS 908
Query: 163 SKALVSEVSL 172
++ L + +
Sbjct: 909 ARELKEHIDM 918
>gi|384136749|ref|YP_005519463.1| hypothetical protein TC41_3059 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290834|gb|AEJ44944.1| protein of unknown function DUF901 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 180
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+++VDGYNV I+ L+ AR+++ + L ++ + V+VV+DA
Sbjct: 13 TRLVIVDGYNVIARRAGRSLAQIED-LEEARREIEDLLSQYRAMYGEDVIVVYDAHRRAG 71
Query: 102 PTHKEEFIGVDIVF--PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
H+EE GV +VF GET ADA IE+ + LR D ++ V TSD +Q A G GA
Sbjct: 72 LGHEEEQAGVRVVFTESGET-ADARIERLVYELR-DEYREITVATSDAAEQQVALGGGAL 129
Query: 160 VWSSKALV 167
S+ L+
Sbjct: 130 RISANELL 137
>gi|169830405|ref|YP_001716387.1| hypothetical protein Daud_0191 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637249|gb|ACA58755.1| protein of unknown function DUF901 [Candidatus Desulforudis
audaxviator MP104C]
Length = 168
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
L+VDGYNV P+L++ L+ AR +LI+ L+ F+ + +V VVFDA + G
Sbjct: 5 LVVDGYNVIFNSPELKD---LNDLEHARARLIDTLINFAALAGQQVTVVFDAHSVPGGVA 61
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
H E + V++++ E AD IE+ I L V+VVT+D+++Q G GA+
Sbjct: 62 HTERYGPVEVIYTSEGETADTVIERMIGRL-SGRSASVFVVTADYVEQRQVLGLGAY 117
>gi|429204786|ref|ZP_19196069.1| hypothetical protein D271_03765 [Lactobacillus saerimneri 30a]
gi|428147009|gb|EKW99242.1| hypothetical protein D271_03765 [Lactobacillus saerimneri 30a]
Length = 175
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YN+ G WP+L+ RL+ AR +L+ L + ++VVFDA+ + GL
Sbjct: 6 ILIVDAYNMIGNWPELDRLKKADRLEEARDQLLHILSNYKRQTTYDIIVVFDAMYVPGLS 65
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
E++ + E AD++IE + ++ +V V TSD +Q + GA
Sbjct: 66 RSYEQYDLRVVWTAEEQTADSYIES-LAGELQNALTQVTVATSDQAEQWTVFAQGAM 121
>gi|399924304|ref|ZP_10781662.1| hypothetical protein Prhi1_03651 [Peptoniphilus rhinitidis 1-13]
Length = 193
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 45 LLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFDALM---SG 100
L VDGYN+ W L + +K L+ AR +LI+ ++EFS +++VFDA + SG
Sbjct: 15 LFVDGYNIINSWQNLID--LKNISLEDARNELIDIMIEFSHSTREHIILVFDAYLVKKSG 72
Query: 101 LPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ ++ G+DIVF E AD +IE+++ + V V TSD+++Q G
Sbjct: 73 GKIYIKD--GIDIVFTKEFETADHYIERQLDEI--GKLTNVRVATSDNVEQQIILSRGGT 128
Query: 160 VWSSKALVSEV 170
S++ L +EV
Sbjct: 129 RISARELEAEV 139
>gi|402813946|ref|ZP_10863540.1| hypothetical protein PAV_2c00700 [Paenibacillus alvei DSM 29]
gi|402507793|gb|EJW18314.1| hypothetical protein PAV_2c00700 [Paenibacillus alvei DSM 29]
Length = 179
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL- 101
VLLVDGYN+ G WP+L K LD AR++L+ L ++ + +VVFDA + GL
Sbjct: 9 VLLVDGYNMIGAWPELREVKDKD-LDEARERLLNMLADYQAYSGRRAIVVFDAYRVPGLG 67
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
+ + + V ET AD IE+ RE G + ++V TSD +Q+ A+ GA
Sbjct: 68 AKYAQGKVTVQFTKEKET-ADECIER---LARELGHRRRQIYVATSDMTEQNVAFAQGAL 123
Query: 160 VWSSKALVSEVSLII 174
S++ E+ LII
Sbjct: 124 RISAR----ELRLII 134
>gi|406839031|ref|ZP_11098625.1| hypothetical protein LvinD2_10737 [Lactobacillus vini DSM 20605]
Length = 180
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREV-KVVVVFDALMSGLP 102
+L+VD YN+ G WP+L G L AR+ L+ LV + +R +++VVFDA+ +P
Sbjct: 5 ILIVDAYNMIGNWPELAKLKKSGHLAAAREHLLHTLVNYRRLRNYQRMIVVFDAMY--VP 62
Query: 103 THKEEF--IGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+E+ G++IV+ E AD++IE + + V V TSD +Q + GA
Sbjct: 63 GLAKEYRKSGLEIVWTAEDQTADSYIE-ALTGQLQTRLTLVTVATSDQAEQWTIFSKGAI 121
>gi|419706817|ref|ZP_14234326.1| Hypothetical protein PS4_77441 [Streptococcus salivarius PS4]
gi|383283452|gb|EIC81407.1| Hypothetical protein PS4_77441 [Streptococcus salivarius PS4]
Length = 171
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F LD AR+ L+ +L ++ + V+ VFDA
Sbjct: 5 ILLVDGYNMIAFWQETRQLFKTNHLDEARETLLRKLNHYANFEHIDVICVFDAQFVPGTR 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + + ++F E AD++IE+ + V V TSD +Q A + GA S
Sbjct: 65 QRYDQYRISVIFTEEDETADSYIERAAAEMNT-VQHLVEVATSDLNEQWAIFSQGALRVS 123
Query: 163 SKALVSEVSLI 173
++ L V+ +
Sbjct: 124 ARELEERVNTV 134
>gi|332652623|ref|ZP_08418368.1| putative tetracycline resistance protein TetP [Ruminococcaceae
bacterium D16]
gi|332517769|gb|EGJ47372.1| putative tetracycline resistance protein TetP [Ruminococcaceae
bacterium D16]
Length = 895
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ W +L+ + LD ARQ+L++ L + R+ +V++VFDA +P
Sbjct: 734 LLVDGYNIIFAWDELKA-IAQDNLDAARQRLMDILENYQGFRKCQVILVFDAYR--VPRG 790
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
E + + +V+ E ADA+IEK L +V V TSD+ +Q G GA
Sbjct: 791 VGEVVHYHNIHVVYTKEAETADAYIEKATYELSRKKY-RVRVATSDYAEQLIILGHGALR 849
Query: 161 WSSKALVSEV 170
S+ +EV
Sbjct: 850 LSATTFHAEV 859
>gi|366165401|ref|ZP_09465156.1| small GTP-binding protein [Acetivibrio cellulolyticus CD2]
Length = 896
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L N K L+ AR KL++ L + ++ +++VFDA + G
Sbjct: 736 LLVDGYNIIFSWDEL-NEIAKDNLEHARNKLMDILCNYQGFKQCILILVFDAYKVKGGTG 794
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E+ +++V+ E ADA+IEK + + V V TSD L+Q G GA S
Sbjct: 795 SVLEYHNINVVYTKEAETADAYIEKVTHEIARE--HHVTVATSDALEQLIILGQGAVRLS 852
Query: 163 SKALVSEV 170
+ L E+
Sbjct: 853 ANDLKEEI 860
>gi|188584817|ref|YP_001916362.1| hypothetical protein Nther_0175 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349504|gb|ACB83774.1| protein of unknown function DUF901 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 170
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT- 103
L+VDGYN+ W L+ + L+++R +LI+EL E+ I K+VVVFDA +
Sbjct: 5 LIVDGYNIINAWDHLKKSA-EENLEISRIELIDELSEYKGILWGKIVVVFDAHSAKQKNR 63
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
H E+ G+ +++ GET AD+ IE + L + G V V TSD +Q G GA
Sbjct: 64 HTEQINGILVIYTKEGET-ADSLIEALVYDLVDKGN--VDVATSDWQEQRVIMGKGAVRL 120
Query: 162 SSKAL 166
S++ L
Sbjct: 121 SARDL 125
>gi|304438769|ref|ZP_07398697.1| tetracycline resistance protein [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372771|gb|EFM26349.1| tetracycline resistance protein [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 176
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 41 AVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMS 99
V L VDGYN+ + L+N ++ L+ AR+K ++ + EF+ V++VFD L+
Sbjct: 9 GVHYLFVDGYNIMNQFSNLKN-LMELDLEQAREKTMDMMAEFASSTGEYVILVFDGYLVK 67
Query: 100 GLPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
P G+++VF E AD +IE+E+ + V V TSD+++Q G
Sbjct: 68 KSPGSNYMHKGIEVVFTKEFVTADHYIERELDKI--GRLRDVRVATSDNIEQQMILSRGG 125
Query: 159 FVWSSKALVSEV 170
S++ L +E+
Sbjct: 126 IRLSARELEAEI 137
>gi|55820191|ref|YP_138633.1| hypothetical protein stu0089 [Streptococcus thermophilus LMG 18311]
gi|55822079|ref|YP_140520.1| hypothetical protein str0089 [Streptococcus thermophilus CNRZ1066]
gi|418028435|ref|ZP_12667001.1| Putative cytosolic protein [Streptococcus thermophilus CNCM I-1630]
gi|445370713|ref|ZP_21425915.1| hypothetical protein IQ5_00494 [Streptococcus thermophilus MTCC
5460]
gi|445385637|ref|ZP_21427624.1| hypothetical protein IQ7_00499 [Streptococcus thermophilus MTCC
5461]
gi|55736176|gb|AAV59818.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gi|55738064|gb|AAV61705.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|354687265|gb|EHE87365.1| Putative cytosolic protein [Streptococcus thermophilus CNCM I-1630]
gi|444751601|gb|ELW76323.1| hypothetical protein IQ7_00499 [Streptococcus thermophilus MTCC
5461]
gi|444751629|gb|ELW76349.1| hypothetical protein IQ5_00494 [Streptococcus thermophilus MTCC
5460]
Length = 171
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F +LD AR+ L+ +L ++ + ++ VFDA +P
Sbjct: 5 ILLVDGYNMIAFWKETRQLFKTNQLDEARETLLRKLNHYANFEHIDIICVFDAQF--VPG 62
Query: 104 HKEEF--IGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+++ + V ++F E AD++IE+ + V V TSD +Q + GA
Sbjct: 63 NRQRYDQYRVSVIFTEEDETADSYIERSAAEMNTIQNL-VEVATSDLNEQWGIFSQGALR 121
Query: 161 WSSKALVSEVSLI 173
S++ L V+ +
Sbjct: 122 VSARELEERVNTV 134
>gi|334127792|ref|ZP_08501694.1| protein of hypothetical function DUF901 [Centipeda periodontii DSM
2778]
gi|333388513|gb|EGK59687.1| protein of hypothetical function DUF901 [Centipeda periodontii DSM
2778]
Length = 177
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
L+DGYNV WP+L ++ LD AR L+ L E+ ++ VVFDA + H+
Sbjct: 11 LIDGYNVINAWPELMR--LRSNLDEARDVLVHILTEYGAFENYEMTVVFDAFFTEDEEHE 68
Query: 106 EEFIG-VDIVFPGE-TCADAWIEK-EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + +++ G AD+ IE+ A+R +V VVTSD +Q GAGA+ +
Sbjct: 69 LQITDRMKVIYTGAGETADSCIERLAYTAVR--AGREVHVVTSDGAEQSVILGAGAYRIT 126
Query: 163 SKALVSEV 170
S L V
Sbjct: 127 SPELRRSV 134
>gi|71904301|ref|YP_281104.1| cytoplasmic protein [Streptococcus pyogenes MGAS6180]
gi|71803396|gb|AAX72749.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS6180]
Length = 172
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W F +LD AR L+ +L ++ + ++ VFDA + GL
Sbjct: 5 ILLVDGYNMIAFWQSTRQLFKINQLDQARNTLLTKLNHYAHFENINIICVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+++ + +VF E AD++IE+ + A V V TSD +Q + GA
Sbjct: 65 QRYDQYY-ISVVFTEEDETADSYIER-MAAELNTAIHMVEVATSDLNEQWTIFSQGALRV 122
Query: 162 SSKALVSEVSLI 173
+++ L V +
Sbjct: 123 TARELEQRVHTV 134
>gi|357039766|ref|ZP_09101558.1| protein of unknown function DUF901 [Desulfotomaculum gibsoniae DSM
7213]
gi|355357572|gb|EHG05345.1| protein of unknown function DUF901 [Desulfotomaculum gibsoniae DSM
7213]
Length = 170
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
++VDGYN+ WP+L L+ AR +L+E L ++ +VVVVFDA + G
Sbjct: 5 IVVDGYNIVHAWPELAK-LKDESLEHARDRLVEILANYAGFSGDRVVVVFDAHRVKGNLE 63
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
EE GV I + E AD+ IE+ + + +DG + V TSD +Q +G GA+ +
Sbjct: 64 RYEEINGVQIFYTREDETADSLIERLVGDMPKDG--NIRVATSDWDEQRVIFGRGAYRMT 121
Query: 163 SKALVS 168
L++
Sbjct: 122 PGELMA 127
>gi|139474427|ref|YP_001129143.1| hypothetical protein SpyM51624 [Streptococcus pyogenes str.
Manfredo]
gi|134272674|emb|CAM30945.1| conserved hypothetical protein [Streptococcus pyogenes str.
Manfredo]
Length = 172
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W F +LD AR L+ +L ++ + ++ VFDA + GL
Sbjct: 5 ILLVDGYNMIAFWQSTRQLFKTNQLDQARNILLTKLNHYAHFENINIICVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+++ + +VF E AD++IE+ + A V V TSD +Q + GA
Sbjct: 65 QRYDQYY-ISVVFTEEDETADSYIER-MAAELNTAIHMVEVATSDLNEQWTIFSQGALRV 122
Query: 162 SSKALVSEVSLI 173
+++ L V +
Sbjct: 123 TARELEQRVHTV 134
>gi|336432894|ref|ZP_08612725.1| hypothetical protein HMPREF0991_01844 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336018176|gb|EGN47929.1| hypothetical protein HMPREF0991_01844 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 186
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L+ K L AR KL++ L + ++ +++VFDA + G P
Sbjct: 13 LLVDGYNIIFAWEELKE-LAKSDLKSARDKLMDVLCNYQGYKKCTLILVFDAYKVEGGPG 71
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IEK + + + V V TSD L+Q G GA S
Sbjct: 72 SVMKYHNIHVVYTKEAETADQYIEKTVRRIGRN--HHVTVATSDALEQVIILGHGAARMS 129
Query: 163 SKALVSEVSLII 174
+ L EV L +
Sbjct: 130 ALGLKEEVELAL 141
>gi|313115541|ref|ZP_07801001.1| putative translation elongation factor G [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310622140|gb|EFQ05635.1| putative translation elongation factor G [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 866
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 5 STSYRRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAV--PV------------------ 44
S RR + L ED EL + F Y + A PV
Sbjct: 666 SVPQRRTAAYRATLEEDAELLKIFERTYGPIKRDPLAAFRPVQKRERPDFDAQQWEILPE 725
Query: 45 -LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
LLVDGYN+ W +L N K L+ AR KL++ L + ++ +++VFDA + G P
Sbjct: 726 YLLVDGYNIIFAWDEL-NALAKDSLEAARHKLMDILCNYQGYQKCNLILVFDAYRVPGSP 784
Query: 103 THKEEFIGVDIVFPGET-CADAWIE---KEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
E++ + +V+ E AD +IE EI R +V V TSD ++Q G GA
Sbjct: 785 GSIEQYHNIHVVYTKEAETADMFIEHVTHEIGKGR-----RVRVATSDGMEQIIILGHGA 839
Query: 159 FVWSSKALVSEVS 171
S++ EV
Sbjct: 840 LRVSARMFHEEVQ 852
>gi|331091093|ref|ZP_08339935.1| hypothetical protein HMPREF9477_00578 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405315|gb|EGG84851.1| hypothetical protein HMPREF9477_00578 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 871
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L+ + ++ AR KL++ L + R+ +++VFDA + G
Sbjct: 706 LLVDGYNIIFAWEDLKE-LSEVNIEGARNKLMDILSNYQGYRQCTLILVFDAYKVPGNVG 764
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ + +V+ E AD +IEK + L + KV V TSD L+Q G GA S
Sbjct: 765 EVQKYHNIHVVYTKEAETADQYIEKTVHELGKH--YKVTVATSDGLEQMIIMGQGANRLS 822
Query: 163 SKALVSEV 170
+K L+ E+
Sbjct: 823 AKGLLEEI 830
>gi|295101496|emb|CBK99041.1| small GTP-binding protein domain [Faecalibacterium prausnitzii
L2-6]
Length = 872
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 32/189 (16%)
Query: 9 RRKKVEKEELPEDTELYRFFSYIYN---------------------TNQGIDNAVPVLLV 47
RR + L ED EL + F Y + + A LLV
Sbjct: 676 RRMAAYRATLEEDAELLKIFERTYGPIKRDPLAAFRPVQKRERPDFAAEQWEIAPEYLLV 735
Query: 48 DGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPTHKE 106
DGYN+ W +L N K LD AR +L++ L + ++ +++VFDA + G P E
Sbjct: 736 DGYNIIFGWDEL-NALSKESLDAARHRLMDILCNYQGFKKCVLILVFDAYRVPGSPGSIE 794
Query: 107 EFIGVDIVFPGET-CADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IE+ EI R +V V TSD ++Q G GA S
Sbjct: 795 QYHNIHVVYTKEAETADMFIERVTHEIGKNR-----RVRVATSDGMEQVIILGHGALRVS 849
Query: 163 SKALVSEVS 171
++ EV
Sbjct: 850 ARMFHEEVQ 858
>gi|303231475|ref|ZP_07318205.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513818|gb|EFL55830.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
Length = 178
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYNV W L+ L+ AR +L +L+ + + +V++VFD +
Sbjct: 5 ILIVDGYNVIFAWQSLKK-LANESLEHARMELRNQLLNYGKFKGYEVILVFDGKYTKSIA 63
Query: 104 HKEEFIG--VDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
EE ++I AD++IE+E+ LR+ V+VVTSD +Q+ G+G
Sbjct: 64 SIEEITKGFIEIYTDDGETADSFIEREVF-LRQGKYTNVYVVTSDGAEQNQILGSGGLRI 122
Query: 162 SSKALVSEVSL 172
++ L +++ L
Sbjct: 123 PARELQNDMRL 133
>gi|299541909|ref|ZP_07052232.1| hypothetical protein BFZC1_23204 [Lysinibacillus fusiformis ZC1]
gi|424739349|ref|ZP_18167768.1| hypothetical protein C518_3883 [Lysinibacillus fusiformis ZB2]
gi|298725647|gb|EFI66288.1| hypothetical protein BFZC1_23204 [Lysinibacillus fusiformis ZC1]
gi|422946746|gb|EKU41152.1| hypothetical protein C518_3883 [Lysinibacillus fusiformis ZB2]
Length = 170
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G W +L + AR++LIE + E+ +V++VFDA + +P
Sbjct: 4 ILLVDGYNMIGSWKELRP-LRDTNFEDARRRLIELMAEYKAAMGWRVIIVFDAHL--VPG 60
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
++ +I V++++ + AD IEK L+ ++ V TSD +Q +G GA
Sbjct: 61 VEQSYIENDVEVIYTRKNETADERIEKMTHELKARNI-QIHVATSDMAEQSVIFGNGALR 119
Query: 161 WSSKALVSEVSLI 173
S++ L + S+I
Sbjct: 120 KSARELEIDTSII 132
>gi|421858348|ref|ZP_16290619.1| predicted RNA-binding protein [Paenibacillus popilliae ATCC 14706]
gi|410832106|dbj|GAC41056.1| predicted RNA-binding protein [Paenibacillus popilliae ATCC 14706]
Length = 183
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL- 101
VLLVDGYN+ G W +L+ RL+ AR L++ L ++ + +V+ VFDA +SGL
Sbjct: 13 VLLVDGYNMIGAWHELK-QLADRRLEDARDCLLDNLADYQAYSDRRVIAVFDAYRVSGLG 71
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
T+ + I V ET AD IE+ + L +++V TSD +Q G GA
Sbjct: 72 ATYTQGKIEVCFTKEKET-ADECIERLVKEL-SHRRRRIYVATSDMTEQRVVLGFGALRI 129
Query: 162 SSKAL 166
S++ L
Sbjct: 130 SAREL 134
>gi|374603240|ref|ZP_09676222.1| hypothetical protein PDENDC454_09810 [Paenibacillus dendritiformis
C454]
gi|374391109|gb|EHQ62449.1| hypothetical protein PDENDC454_09810 [Paenibacillus dendritiformis
C454]
Length = 179
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL- 101
VLLVDGYN+ G W +L RL+ AR +L++ L E+ +V+ VFDA + GL
Sbjct: 9 VLLVDGYNMIGAWHEL-KQLADRRLEDARDRLLDNLAEYQAYSGRRVIAVFDAYRVPGLG 67
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
T+ + I V ET AD IE+ + L +++V TSD +Q G GA
Sbjct: 68 ATYTQGKIEVYFTKEKET-ADECIERLVKEL-SHRRRQIYVATSDMTEQRVVLGLGALRI 125
Query: 162 SSKAL 166
S++ L
Sbjct: 126 SAREL 130
>gi|315640327|ref|ZP_07895444.1| tetracycline resistance protein [Enterococcus italicus DSM 15952]
gi|315483989|gb|EFU74468.1| tetracycline resistance protein [Enterococcus italicus DSM 15952]
Length = 186
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYN+ G WP+L + R++ AR+ L+ L + ++++VVFDA T
Sbjct: 5 LLIVDGYNMIGAWPELAVLKNQDRMEEAREDLLTRLSNMAKYEGLEIIVVFDAQFVPGVT 64
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ ++++F GET AD++IE+ I +V V TSD +Q + GA
Sbjct: 65 KSYQKYQLEVIFTEEGET-ADSYIER-IAGEMNTILTQVTVATSDLAEQWVIFSQGALRT 122
Query: 162 SSKALVSEV 170
S++ L V
Sbjct: 123 SARELYKSV 131
>gi|337286339|ref|YP_004625812.1| hypothetical protein Thein_0976 [Thermodesulfatator indicus DSM
15286]
gi|335359167|gb|AEH44848.1| protein of unknown function DUF901 [Thermodesulfatator indicus DSM
15286]
Length = 163
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LL+DGYN+ P+L +K + ARQ L+++L E+ IR ++ VVFDA P
Sbjct: 5 LLIDGYNLLHQVPEL-AFLMKENPEEARQALLKQLQEYQRIRRHRITVVFDAWDRAEPRS 63
Query: 105 KEEFIGVDIVF--PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ G+ ++F GET AD +I++ V +E ++ VVTSD + GA +
Sbjct: 64 EVSIKGIKVIFTAQGET-ADDYIKRRAVKEKE----RIVVVTSDRAIRSYVETYGAISIT 118
Query: 163 SKALVSEVSLIIY 175
S+ + ++ Y
Sbjct: 119 SRDFLGKMEAAFY 131
>gi|402303282|ref|ZP_10822378.1| YacP-like NYN domain protein [Selenomonas sp. FOBRC9]
gi|400378912|gb|EJP31762.1| YacP-like NYN domain protein [Selenomonas sp. FOBRC9]
Length = 177
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
+VDGYNV WP+L ++G LD AR L+ L E+ ++ +VFDAL T
Sbjct: 11 IVDGYNVINAWPELIR--LRGNLDEARDVLVRILAEYGAFENYEMTIVFDALF----TED 64
Query: 106 EEFI-----GVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
EE + + +++ G AD+ IE+ DG +V VVTSD +Q GAGA+
Sbjct: 65 EERVIELGRRLRVIYTGAGETADSCIERLAYRAVRDG-REVHVVTSDGAEQSVILGAGAY 123
Query: 160 VWSSKAL 166
S L
Sbjct: 124 RIPSPEL 130
>gi|30018363|ref|NP_829994.1| cytoplasmic protein [Bacillus cereus ATCC 14579]
gi|206972247|ref|ZP_03233194.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|218232863|ref|YP_002364942.1| hypothetical protein BCB4264_A0113 [Bacillus cereus B4264]
gi|228919043|ref|ZP_04082422.1| hypothetical protein bthur0011_790 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228950641|ref|ZP_04112775.1| hypothetical protein bthur0006_810 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229040998|ref|ZP_04189761.1| hypothetical protein bcere0027_790 [Bacillus cereus AH676]
gi|229125610|ref|ZP_04254642.1| hypothetical protein bcere0015_800 [Bacillus cereus BDRD-Cer4]
gi|229142899|ref|ZP_04271340.1| hypothetical protein bcere0012_800 [Bacillus cereus BDRD-ST24]
gi|229176693|ref|ZP_04304097.1| hypothetical protein bcere0005_800 [Bacillus cereus 172560W]
gi|296500927|ref|YP_003662627.1| hypothetical protein BMB171_C0089 [Bacillus thuringiensis BMB171]
gi|423422326|ref|ZP_17399357.1| hypothetical protein IE5_00015 [Bacillus cereus BAG3X2-2]
gi|423507881|ref|ZP_17484448.1| hypothetical protein IG1_05422 [Bacillus cereus HD73]
gi|423578500|ref|ZP_17554611.1| hypothetical protein IIA_00015 [Bacillus cereus VD014]
gi|423590620|ref|ZP_17566682.1| hypothetical protein IIE_06007 [Bacillus cereus VD045]
gi|423638096|ref|ZP_17613748.1| hypothetical protein IK7_04504 [Bacillus cereus VD156]
gi|423653027|ref|ZP_17628326.1| hypothetical protein IKG_00015 [Bacillus cereus VD200]
gi|449086759|ref|YP_007419200.1| cytoplasmic protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|29893903|gb|AAP07195.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
gi|206732821|gb|EDZ49996.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|218160820|gb|ACK60812.1| conserved hypothetical protein [Bacillus cereus B4264]
gi|228606736|gb|EEK64153.1| hypothetical protein bcere0005_800 [Bacillus cereus 172560W]
gi|228640520|gb|EEK96909.1| hypothetical protein bcere0012_800 [Bacillus cereus BDRD-ST24]
gi|228657802|gb|EEL13608.1| hypothetical protein bcere0015_800 [Bacillus cereus BDRD-Cer4]
gi|228727295|gb|EEL78489.1| hypothetical protein bcere0027_790 [Bacillus cereus AH676]
gi|228808992|gb|EEM55477.1| hypothetical protein bthur0006_810 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228840568|gb|EEM85830.1| hypothetical protein bthur0011_790 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296321979|gb|ADH04907.1| putative cytoplasmic protein [Bacillus thuringiensis BMB171]
gi|401120043|gb|EJQ27844.1| hypothetical protein IE5_00015 [Bacillus cereus BAG3X2-2]
gi|401220257|gb|EJR26899.1| hypothetical protein IIE_06007 [Bacillus cereus VD045]
gi|401221225|gb|EJR27849.1| hypothetical protein IIA_00015 [Bacillus cereus VD014]
gi|401271820|gb|EJR77823.1| hypothetical protein IK7_04504 [Bacillus cereus VD156]
gi|401303135|gb|EJS08698.1| hypothetical protein IKG_00015 [Bacillus cereus VD200]
gi|402442668|gb|EJV74589.1| hypothetical protein IG1_05422 [Bacillus cereus HD73]
gi|449020516|gb|AGE75679.1| cytoplasmic protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 170
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q +G GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFGQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|365164067|ref|ZP_09360153.1| hypothetical protein HMPREF1014_05616 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363613368|gb|EHL64885.1| hypothetical protein HMPREF1014_05616 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 170
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDIDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q +G GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFGQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|401679899|ref|ZP_10811823.1| YacP-like NYN domain protein [Veillonella sp. ACP1]
gi|400219026|gb|EJO49897.1| YacP-like NYN domain protein [Veillonella sp. ACP1]
Length = 178
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYNV W L+ L+ AR +L +L+ + + +V++VFD +
Sbjct: 5 ILIVDGYNVIFAWQSLKK-LANESLEHARMELRNQLLNYGKFKGYEVILVFDGKYTKSIA 63
Query: 104 HKEE----FIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
EE FI V GET AD++IE+E+ LR+ V+VVTSD +Q+ G+G
Sbjct: 64 SIEEITKGFIEV-YTDDGET-ADSFIEREVF-LRQGKYTNVYVVTSDGAEQNQILGSGGL 120
Query: 160 VWSSKALVSEVSL 172
++ L +++ L
Sbjct: 121 RIPARELQNDMRL 133
>gi|268611182|ref|ZP_06144909.1| small GTP-binding protein [Ruminococcus flavefaciens FD-1]
Length = 885
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L+ + LD AR +LI+ + + ++++VFDA + G
Sbjct: 746 LLVDGYNIIFAWDDLKK-IAEENLDAARGELIKRMCNYQGYAGCELILVFDAYKVKGRHR 804
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E++ +++VF E+ AD++IE+ L +D +V V TSD L+Q G GA S
Sbjct: 805 DVEKYCNINLVFTKESETADSYIERVTHELSKD--HRVRVATSDGLEQMIILGNGAMRIS 862
Query: 163 S 163
+
Sbjct: 863 A 863
>gi|260584967|ref|ZP_05852711.1| hypothetical cytosolic protein [Granulicatella elegans ATCC 700633]
gi|260157397|gb|EEW92469.1| hypothetical cytosolic protein [Granulicatella elegans ATCC 700633]
Length = 174
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
++DGYN+ G WP+L + +G L+ AR LI F V+V +VFDA T
Sbjct: 7 IIDGYNMIGAWPELVSLKKQGDLESARDLLIHHCANFRKFEHVEVWIVFDAQFVPGITQS 66
Query: 106 EEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSK 164
E V ++F E AD +IE+ + + +V V TSD +Q + GA S++
Sbjct: 67 FESSQVKVIFTAEDETADEYIERTVSEMNTQ-VIQVSVATSDLAEQWVIFQKGALRKSAR 125
Query: 165 ALVSEVS 171
E+
Sbjct: 126 EFFKEIQ 132
>gi|354585444|ref|ZP_09004331.1| protein of unknown function DUF901 [Paenibacillus lactis 154]
gi|353188713|gb|EHB54233.1| protein of unknown function DUF901 [Paenibacillus lactis 154]
Length = 172
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G WP L ++ AR L+ +L ++ ++V+ +FDA +P
Sbjct: 7 VLLVDGYNMIGGWPFLAK-LASSSMEEARDVLLAKLADYQAYSGLRVIAIFDAYR--VPG 63
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ + V + F E AD IE+ +V K++V TSD ++QH + GA
Sbjct: 64 LGKSYTQGKVQVYFTKEKETADECIER-LVGEFSHRRRKIYVATSDLIEQHIIFARGALR 122
Query: 161 WSSKALVSEV 170
S++ L++EV
Sbjct: 123 LSARELLNEV 132
>gi|303228956|ref|ZP_07315766.1| conserved hypothetical protein [Veillonella atypica
ACS-134-V-Col7a]
gi|429759534|ref|ZP_19292032.1| hypothetical protein HMPREF0870_00463 [Veillonella atypica KON]
gi|302516370|gb|EFL58302.1| conserved hypothetical protein [Veillonella atypica
ACS-134-V-Col7a]
gi|429179495|gb|EKY20742.1| hypothetical protein HMPREF0870_00463 [Veillonella atypica KON]
Length = 178
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYNV W L+ L+ AR +L +L+ + + +V++VFD +
Sbjct: 5 ILIVDGYNVIFAWQSLKK-LANESLEHARMELRNQLLNYGKFKGYEVILVFDGKYTKSIA 63
Query: 104 HKEE----FIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
EE FI V GET AD++IE+E+ LR+ V+VVTSD +Q+ G+G
Sbjct: 64 SIEEITKGFIEV-YTDDGET-ADSFIEREVF-LRQGKYTNVYVVTSDGAEQNQILGSGGL 120
Query: 160 VWSSKALVSEVSL 172
++ L +++ L
Sbjct: 121 RIPARELQNDMRL 133
>gi|229188378|ref|ZP_04315426.1| hypothetical protein bcere0002_800 [Bacillus cereus ATCC 10876]
gi|228595052|gb|EEK52823.1| hypothetical protein bcere0002_800 [Bacillus cereus ATCC 10876]
Length = 170
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q +G GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFGQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|268608244|ref|ZP_06141971.1| small GTP-binding protein [Ruminococcus flavefaciens FD-1]
Length = 342
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L+ + LD AR +LI+ + + ++++VFDA + G
Sbjct: 203 LLVDGYNIIFAWDDLKK-IAEENLDAARGELIKRMCNYQGYAGCELILVFDAYKVKGRHR 261
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E++ +++VF E+ AD++IE+ L +D +V V TSD L+Q G GA S
Sbjct: 262 DVEKYCNINLVFTKESETADSYIERVTHELSKD--HRVRVATSDGLEQMIILGNGAMRIS 319
Query: 163 S 163
+
Sbjct: 320 A 320
>gi|154505130|ref|ZP_02041868.1| hypothetical protein RUMGNA_02643 [Ruminococcus gnavus ATCC 29149]
gi|153794609|gb|EDN77029.1| putative translation elongation factor G [Ruminococcus gnavus ATCC
29149]
Length = 900
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L+ K L AR KL++ L + ++ +++VFDA + G P
Sbjct: 727 LLVDGYNIIFAWEELKE-LAKSDLKSARDKLMDVLCNYQGYKKCTLILVFDAYKVEGGPG 785
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IEK + + + V V TSD L+Q G GA S
Sbjct: 786 SVMKYHNIHVVYTKEAETADQYIEKTVRRIGRN--HHVTVATSDALEQVIILGHGAARMS 843
Query: 163 SKALVSEVSLII 174
+ L EV L +
Sbjct: 844 ALGLKEEVELAL 855
>gi|152973940|ref|YP_001373457.1| hypothetical protein Bcer98_0087 [Bacillus cytotoxicus NVH 391-98]
gi|152022692|gb|ABS20462.1| protein of unknown function DUF901 [Bacillus cytotoxicus NVH
391-98]
Length = 170
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWKDLK-KLRDVDLQASRDALIDKMADYQGYTGTKVMIVFDAYTVQGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ LR + +++V TSD+ +Q +G GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLASELR-NINTQIYVATSDYTEQWVIFGQGALRK 120
Query: 162 SSKALVSEVSLI 173
S++ L EV +
Sbjct: 121 SARELELEVQAM 132
>gi|304436601|ref|ZP_07396570.1| protein of hypothetical function DUF901 [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|304370297|gb|EFM23953.1| protein of hypothetical function DUF901 [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 177
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
L+DGYNV WP+L ++ LD AR LI L E+ ++ VVFDA + H
Sbjct: 11 LIDGYNVINAWPELIR--LRSNLDEARDVLIRILTEYGAFENYEMTVVFDAFATDEEEHA 68
Query: 106 EEF---IGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E + V GET AD+ IE+ G +V VVTSD +Q GAGA+ +
Sbjct: 69 LEISSRMRVIYTATGET-ADSCIERLAYTAVRMG-REVHVVTSDGAEQSLILGAGAYRIT 126
Query: 163 SKALVSEV 170
S L V
Sbjct: 127 SPELRRSV 134
>gi|260424801|ref|ZP_05733342.2| putative tetracycline resistance protein [Dialister invisus DSM
15470]
gi|260403246|gb|EEW96793.1| putative tetracycline resistance protein [Dialister invisus DSM
15470]
Length = 178
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
L+DGYNV + P+ F + L+ +R+KL++ + ++ +V+V+VVFD L
Sbjct: 15 LIDGYNVIFWLPE---EFPRIDLESSRKKLVDLMQDYGAHNDVEVIVVFDGNSRSLKAKV 71
Query: 106 EE---FIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E F V + P + AD++IE E R D ++VVTSD +Q+ G GA+ +
Sbjct: 72 ETVSPFFHV-VYTPSKMTADSYIEMESYK-RRDEYRSIFVVTSDGAEQNQVLGNGAYRMA 129
Query: 163 SKALV 167
LV
Sbjct: 130 VSDLV 134
>gi|169344147|ref|ZP_02865130.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
gi|169297758|gb|EDS79857.1| conserved hypothetical protein [Clostridium perfringens C str.
JGS1495]
Length = 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSG 100
+ V+ +DGYNV WP L+ D+AR +L E L ++ K+ +VFDA + G
Sbjct: 1 MRVIFIDGYNVINSWPNLKKS-KNYSYDIARTELTEMLENYAAFNSCKIYLVFDAHKVVG 59
Query: 101 LPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
KE + VF E ADA+IE+ + L ++ VVTSD L+Q + GA
Sbjct: 60 NIESKELSGNIITVFTKEGEIADAYIERMVDELGRK--VEIVVVTSDRLEQQTIFQRGAV 117
Query: 160 VWSSKALVSEV 170
SS +EV
Sbjct: 118 RMSSIEFYNEV 128
>gi|448820270|ref|YP_007413432.1| Nuclease, NYN_YacP family [Lactobacillus plantarum ZJ316]
gi|448273767|gb|AGE38286.1| Nuclease, NYN_YacP family [Lactobacillus plantarum ZJ316]
Length = 182
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP+L + RL AR +LI L E+ I + + +VFDA+ +P
Sbjct: 5 LLIVDAYNMIGNWPELNHLKQTDRLPQARDELISMLTEYKKITGLNISLVFDAMY--VPG 62
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + + D+ + AD++IEK ++ +V V TSD +Q + GA
Sbjct: 63 NSKSYRQADLEIIWTSKDQTADSYIEK-YAGEKQSRVLQVTVATSDQAEQWVIFSEGAL 120
>gi|423393454|ref|ZP_17370680.1| hypothetical protein ICG_05302 [Bacillus cereus BAG1X1-3]
gi|401629561|gb|EJS47374.1| hypothetical protein ICG_05302 [Bacillus cereus BAG1X1-3]
Length = 170
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W +L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGELK-ELRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IEK + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEKLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|326802930|ref|YP_004320748.1| hypothetical protein HMPREF9243_0389 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650990|gb|AEA01173.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 178
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 10/133 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDV--ARQKLIEELVEFSMIREVKVVVVFDAL-MSG 100
VL+VDGYN+ G WP+L +KG+ D+ AR +L++ L ++ + VVFDA+ + G
Sbjct: 5 VLIVDGYNMIGAWPELVK--LKGQDDIEGARDQLLQRLSNYAAYHALACWVVFDAMFVPG 62
Query: 101 LPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGC-PKVWVVTSDHLQQHAAYGAGA 158
L +++ +++VF E AD++IE I R+ G V V TSD +Q + GA
Sbjct: 63 LSKSYKKY-RLNVVFTAEGQTADSYIEAMIQ--RQVGVLTNVTVATSDLAEQRLVFQQGA 119
Query: 159 FVWSSKALVSEVS 171
S+ L+ V
Sbjct: 120 IRQSALELLKNVQ 132
>gi|254555719|ref|YP_003062136.1| hypothetical protein JDM1_0550 [Lactobacillus plantarum JDM1]
gi|300769740|ref|ZP_07079622.1| protein of hypothetical function DUF901 [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308179700|ref|YP_003923828.1| hypothetical protein LPST_C0512 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380031616|ref|YP_004888607.1| nuclease, NYN_YacP family [Lactobacillus plantarum WCFS1]
gi|418274316|ref|ZP_12889814.1| nuclease, NYN_YacP family [Lactobacillus plantarum subsp. plantarum
NC8]
gi|254044646|gb|ACT61439.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
gi|300492648|gb|EFK27834.1| protein of hypothetical function DUF901 [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|308045191|gb|ADN97734.1| hypothetical protein LPST_C0512 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342240859|emb|CCC78093.1| nuclease, NYN_YacP family [Lactobacillus plantarum WCFS1]
gi|376009882|gb|EHS83208.1| nuclease, NYN_YacP family [Lactobacillus plantarum subsp. plantarum
NC8]
Length = 181
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VD YN+ G WP+L + RL AR +LI L E+ I + + +VFDA+ +P
Sbjct: 5 LLIVDAYNMIGNWPELNHLKQTDRLPQARDELISMLTEYKKITGLNISLVFDAMY--VPG 62
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + + D+ + AD++IEK ++ +V V TSD +Q + GA
Sbjct: 63 NSKSYRQADLEIIWTSKDQTADSYIEK-YAGEKQSRVLQVTVATSDQAEQWVIFSEGAL 120
>gi|309774686|ref|ZP_07669710.1| putative tetracycline resistance protein TetP [Erysipelotrichaceae
bacterium 3_1_53]
gi|308917586|gb|EFP63302.1| putative tetracycline resistance protein TetP [Erysipelotrichaceae
bacterium 3_1_53]
Length = 862
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT- 103
LLVDGYNV W +L ++ K LD AR +LI+ + + R +++VFDA T
Sbjct: 702 LLVDGYNVIHDWEEL-SYLAKDHLDAARHRLIDMMGSYQGYRGCVLILVFDAYKVKAGTG 760
Query: 104 --HKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+K+ I V +T AD +IE+ L + +V V TSD ++Q A G GA
Sbjct: 761 AAYKDGSIYVVYTKQAQT-ADMYIEQATHQLASE--FRVTVATSDGMEQLIASGQGASRM 817
Query: 162 SSKALVSEV 170
SS+ L EV
Sbjct: 818 SSRQLREEV 826
>gi|386085799|ref|YP_006001673.1| RNA-binding protein containing a PIN domain [Streptococcus
thermophilus ND03]
gi|386343697|ref|YP_006039861.1| hypothetical protein STH8232_0131 [Streptococcus thermophilus JIM
8232]
gi|312277512|gb|ADQ62169.1| Predicted RNA-binding protein containing a PIN domain
[Streptococcus thermophilus ND03]
gi|339277158|emb|CCC18906.1| hypothetical protein STH8232_0131 [Streptococcus thermophilus JIM
8232]
Length = 171
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ +W + F +LD AR+ L+ +L ++ + ++ VFDA +P
Sbjct: 5 ILLVDGYNMIAFWKETRQLFKINQLDEARETLLRKLNHYANFEHIDIICVFDAQF--VPG 62
Query: 104 HKEEF--IGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+++ + V ++F E AD++IE+ + V V TSD +Q + GA
Sbjct: 63 NRQRYDQYRVSVIFTEEDETADSYIERSAAEMNTIQNL-VEVATSDLNEQWGIFSQGALR 121
Query: 161 WSSKALVSEVSLI 173
S++ L V+ +
Sbjct: 122 VSARELEERVNTV 134
>gi|423399366|ref|ZP_17376564.1| hypothetical protein ICU_05057 [Bacillus cereus BAG2X1-1]
gi|423409858|ref|ZP_17387007.1| hypothetical protein ICY_04543 [Bacillus cereus BAG2X1-3]
gi|401644466|gb|EJS62156.1| hypothetical protein ICU_05057 [Bacillus cereus BAG2X1-1]
gi|401652398|gb|EJS69955.1| hypothetical protein ICY_04543 [Bacillus cereus BAG2X1-3]
Length = 170
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W +L+ L +R LI+++ ++ ++V++VFDA
Sbjct: 3 DILIVDGYNIIGAWGELK-KLRDVDLQSSRDALIDKMADYQGYTGIRVMIVFDAYTVQGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVSLII 174
S++ L EV ++
Sbjct: 121 SARELELEVQAMV 133
>gi|419720934|ref|ZP_14248138.1| miro-like / elongation factor G, domain IV / elongation factor G,
C-terminal domain / YacP-like NYN domain multi-domain
protein [Lachnoanaerobaculum saburreum F0468]
gi|383302893|gb|EIC94374.1| miro-like / elongation factor G, domain IV / elongation factor G,
C-terminal domain / YacP-like NYN domain multi-domain
protein [Lachnoanaerobaculum saburreum F0468]
Length = 869
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ + K + +D AR +L+E L+++ ++ ++++VFDA + PT
Sbjct: 701 LLVDGYNII-FASKSLSELADANIDAARDRLLELLIDYKAYKDYEIILVFDAYRLKNHPT 759
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
F GV +V+ AD +IEK + + V V TSD ++Q G GA + S
Sbjct: 760 EVLNFSGVYVVYTKTAETADQYIEKTTHEMMKK--YDVTVATSDGIEQIIIRGKGAILIS 817
Query: 163 SKALVSEV 170
++ + ++
Sbjct: 818 AREFLCDL 825
>gi|225026841|ref|ZP_03716033.1| hypothetical protein EUBHAL_01094 [Eubacterium hallii DSM 3353]
gi|224955848|gb|EEG37057.1| putative translation elongation factor G [Eubacterium hallii DSM
3353]
Length = 904
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L N K +D AR KL++ L + +++VFDA + G
Sbjct: 735 LLVDGYNIIFAWEEL-NELAKASIDAARNKLMDILSNYQGFIGCTLILVFDAYKVKGNQG 793
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFVW 161
+++ + +V+ E AD +IEK E G KV V TSD L+Q G GA+
Sbjct: 794 EVQKYHNIYVVYTKEAETADQYIEK---TTHEIGRKYKVTVATSDALEQVIVMGQGAYRI 850
Query: 162 SSKALVSEV 170
S++ EV
Sbjct: 851 SARDFYEEV 859
>gi|427405498|ref|ZP_18895703.1| hypothetical protein HMPREF9161_00063 [Selenomonas sp. F0473]
gi|425708339|gb|EKU71378.1| hypothetical protein HMPREF9161_00063 [Selenomonas sp. F0473]
Length = 177
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
LVDGYNV WP+L ++G LD AR L+ L E+ ++ VVFDAL T
Sbjct: 11 LVDGYNVINAWPELIR--LRGNLDEARDVLVRILAEYGAFENYEMTVVFDALF----TED 64
Query: 106 EEFI-----GVDIVFPGE-TCADAWIEKEIVALRE-DGCPKVWVVTSDHLQQHAAYGAGA 158
EE I + +++ G AD+ IE+ +A R +V VVTSD +Q GAGA
Sbjct: 65 EERILHLSNRLRVIYTGAGETADSCIER--LAYRAVRAGREVHVVTSDGAEQSLILGAGA 122
Query: 159 FVWSSKAL 166
+ S L
Sbjct: 123 YRIPSPEL 130
>gi|418961726|ref|ZP_13513611.1| hypothetical protein SMXD51_07297 [Lactobacillus salivarius SMXD51]
gi|380343821|gb|EIA32169.1| hypothetical protein SMXD51_07297 [Lactobacillus salivarius SMXD51]
Length = 176
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YN+ G WP+L+ RL+ AR L++ L + +++VVFDA+ + G+
Sbjct: 5 ILIVDAYNMIGNWPQLDKLKKSDRLEDARDLLLKILSNYRKQANTEIIVVFDAMYVPGMT 64
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
E++ + +V+ E AD +IE + + +V V TSD +Q + GA
Sbjct: 65 KQYEQY-DLQVVWTAEDQTADTYIE-SLAGRLQTPLTQVRVATSDQAEQWTIFSQGAL 120
>gi|373494879|ref|ZP_09585476.1| hypothetical protein HMPREF0380_01114 [Eubacterium infirmum F0142]
gi|371967241|gb|EHO84713.1| hypothetical protein HMPREF0380_01114 [Eubacterium infirmum F0142]
Length = 840
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS-GLP 102
VLLVD YN+ L++ K L AR+K++E + E+S ++ + ++VFDA +
Sbjct: 702 VLLVDAYNLIHANTYLKD-LAKLDLGAAREKMLEIVAEYSSMKGFEAILVFDAYKNKDRL 760
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+KE+ +GV VF AD++IE+ + + VVTSD L+Q + GA
Sbjct: 761 ANKEDALGVSFVFTASNETADSYIERYV--FEHIKSENITVVTSDRLEQMTIFQMGANRQ 818
Query: 162 SSKALVSEVSLI 173
S+ E L+
Sbjct: 819 SASDFFDEFDLL 830
>gi|90962218|ref|YP_536134.1| hypothetical protein LSL_1244 [Lactobacillus salivarius UCC118]
gi|227891224|ref|ZP_04009029.1| protein of hypothetical function DUF901 [Lactobacillus salivarius
ATCC 11741]
gi|301299864|ref|ZP_07206098.1| conserved hypothetical protein [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|417788563|ref|ZP_12436246.1| hypothetical protein DUF901 [Lactobacillus salivarius NIAS840]
gi|90821412|gb|ABE00051.1| Conserved hypothetical protein [Lactobacillus salivarius UCC118]
gi|227867098|gb|EEJ74519.1| protein of hypothetical function DUF901 [Lactobacillus salivarius
ATCC 11741]
gi|300852535|gb|EFK80185.1| conserved hypothetical protein [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|334308740|gb|EGL99726.1| hypothetical protein DUF901 [Lactobacillus salivarius NIAS840]
Length = 176
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YN+ G WP+L+ RL+ AR L++ L + +++VVFDA+ + G+
Sbjct: 5 ILIVDAYNMIGNWPQLDKLKKSDRLEDARDLLLKILSNYRKQANTEIIVVFDAMYVPGMT 64
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
E++ + +V+ E AD +IE + + +V V TSD +Q + GA
Sbjct: 65 KQYEQY-DLQVVWTAEDQTADTYIE-SLAGRLQTPLTQVRVATSDQAEQWTIFSQGAL 120
>gi|302387686|ref|YP_003823508.1| hypothetical protein Closa_3358 [Clostridium saccharolyticum WM1]
gi|302198314|gb|ADL05885.1| protein of unknown function DUF901 [Clostridium saccharolyticum
WM1]
Length = 173
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ WP+L+ + LD AR +L + L + ++ V++VFD + G P
Sbjct: 6 LLVDGYNIIFAWPELK-ELAETNLDSARTRLQDVLCNYQGYKKCNVLLVFDGYKVRGNPG 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + ++F E AD +IEK ++ + +V V TSD L+Q G G S
Sbjct: 65 TVMNYHNIHVIFTKEAETADQYIEK--ISQQIGRQYQVRVATSDKLEQVIILGKGCTRLS 122
Query: 163 SKALVSEV 170
++ L E+
Sbjct: 123 ARDLKKEI 130
>gi|313896250|ref|ZP_07829803.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975049|gb|EFR40511.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 177
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
+VDGYNV WP+L ++G LD AR L+ L E+ ++ +VFDAL T
Sbjct: 11 IVDGYNVINAWPELIR--LRGNLDEARDVLVRILAEYGAFENYEMTIVFDALF----TED 64
Query: 106 EEFI-----GVDIVFPGE-TCADAWIEK-EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
EE + + +++ G AD+ IE+ A+RE +V VVTSD +Q GAGA
Sbjct: 65 EERVIELGRRLRVIYTGAGETADSCIERIAYRAVREG--REVHVVTSDSAEQSVILGAGA 122
Query: 159 FVWSSKALVSEVS 171
+ S L V
Sbjct: 123 YRIPSPELRRSVK 135
>gi|409386144|ref|ZP_11238609.1| Hypothetical protein DUF901, similar to C-terminal domain of
ribosome protection-type Tc-resistance proteins
[Lactococcus raffinolactis 4877]
gi|399206554|emb|CCK19524.1| Hypothetical protein DUF901, similar to C-terminal domain of
ribosome protection-type Tc-resistance proteins
[Lactococcus raffinolactis 4877]
Length = 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYN+ G W + F L+ AR L+++L +++ ++++ VFDA T
Sbjct: 5 LLIVDGYNMIGAWQETHQLFQNNDLEQARDLLLKKLSDYAGFEGLEIICVFDAQFVPGVT 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
K V ++F E AD++IEK + + V+V TSD +Q + GA
Sbjct: 65 SKFHVHNVLVIFTKEDETADSYIEK-LAGKCNNALTTVYVATSDLAEQWVIFSQGAMRIP 123
Query: 163 SKALVSEVSL 172
++ L V+L
Sbjct: 124 ARELEERVNL 133
>gi|229015495|ref|ZP_04172493.1| hypothetical protein bcere0030_910 [Bacillus cereus AH1273]
gi|229021704|ref|ZP_04178286.1| hypothetical protein bcere0029_830 [Bacillus cereus AH1272]
gi|228739572|gb|EEL89986.1| hypothetical protein bcere0029_830 [Bacillus cereus AH1272]
gi|228745782|gb|EEL95786.1| hypothetical protein bcere0030_910 [Bacillus cereus AH1273]
Length = 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W +L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGELK-ELRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + ++++F + AD IEK + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRIEVIFTRKNQTADEKIEKLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|320530260|ref|ZP_08031329.1| hypothetical protein HMPREF9555_01415 [Selenomonas artemidis F0399]
gi|320137475|gb|EFW29388.1| hypothetical protein HMPREF9555_01415 [Selenomonas artemidis F0399]
Length = 177
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
+VDGYNV WP+L ++G LD AR L+ L E+ ++ +VFDAL T
Sbjct: 11 IVDGYNVINAWPELIR--LRGNLDEARDVLVRILAEYGAFENYEMTIVFDALF----TED 64
Query: 106 EEFI-----GVDIVFPGE-TCADAWIEK-EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
EE + + +++ G AD+ IE+ A+RE +V VVTSD +Q GAGA
Sbjct: 65 EERVIELGRHLRVIYTGAGETADSCIERIAYRAVREG--REVHVVTSDSAEQSVILGAGA 122
Query: 159 FVWSSKALVSEVS 171
+ S L V
Sbjct: 123 YRIPSPELRRSVK 135
>gi|335038725|ref|ZP_08531939.1| protein of unknown function DUF901 [Caldalkalibacillus thermarum
TA2.A1]
gi|334181389|gb|EGL83940.1| protein of unknown function DUF901 [Caldalkalibacillus thermarum
TA2.A1]
Length = 169
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 7/133 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL- 101
+L+VDGYNV G + F + RL+ AR L+++L ++ KV VVFDA L+ G+
Sbjct: 4 ILIVDGYNVIGAAEDM-LPFARNRLEDARDWLLDKLADYQGYTGTKVYVVFDAHLVPGIG 62
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
++E ++++F E AD IEK + LR +++V TSD+ +Q +G GA
Sbjct: 63 KVYRER--NIEVIFTKEKETADECIEKLVRRLRR-VQRQIYVATSDYTEQRIVFGEGALR 119
Query: 161 WSSKALVSEVSLI 173
S++ L++E++ +
Sbjct: 120 KSARELLTELNHV 132
>gi|169830055|ref|YP_001700213.1| hypothetical protein Bsph_4639 [Lysinibacillus sphaericus C3-41]
gi|168994543|gb|ACA42083.1| Hypothetical yacP protein [Lysinibacillus sphaericus C3-41]
Length = 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G W +L + AR++LIE + E+ +V++VFDA + +P
Sbjct: 4 ILLVDGYNMIGSWKELRP-LRDTNFEDARKRLIELMAEYKAAMGWRVIIVFDAHL--VPG 60
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
++ ++ V++++ + AD IEK L+ ++ V TSD +Q +G GA
Sbjct: 61 VEQSYLESDVEVIYTRKNETADERIEKMTHELKARNV-QIHVATSDMAEQSVIFGNGALR 119
Query: 161 WSSKALVSEVSLI 173
S++ L + S+I
Sbjct: 120 KSARELEIDTSII 132
>gi|423421741|ref|ZP_17398830.1| hypothetical protein IE3_05213 [Bacillus cereus BAG3X2-1]
gi|401096860|gb|EJQ04897.1| hypothetical protein IE3_05213 [Bacillus cereus BAG3X2-1]
Length = 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-ELRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IEK + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEKLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|126654405|ref|ZP_01726150.1| YacP [Bacillus sp. B14905]
gi|126589155|gb|EAZ83339.1| YacP [Bacillus sp. B14905]
Length = 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+LLVDGYN+ G W +L + AR++LIE + E+ +V++VFDA + +P
Sbjct: 4 ILLVDGYNMIGSWKELRP-LRDTNFEDARKRLIELMAEYKAAMGWRVIIVFDAHL--VPG 60
Query: 104 HKEEFI--GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
++ ++ V++++ + AD IEK L+ ++ V TSD +Q +G GA
Sbjct: 61 VEQSYLESDVEVIYTRKNETADERIEKMTHELKARNV-QIHVATSDMAEQSVIFGNGALR 119
Query: 161 WSSKALVSEVSLI 173
S++ L + S+I
Sbjct: 120 KSARELEIDTSII 132
>gi|332522372|ref|ZP_08398624.1| hypothetical protein STRPO_1727 [Streptococcus porcinus str.
Jelinkova 176]
gi|332313636|gb|EGJ26621.1| hypothetical protein STRPO_1727 [Streptococcus porcinus str.
Jelinkova 176]
Length = 177
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F +LD AR L+ +L ++ ++ ++ VFDA + G+
Sbjct: 5 ILLVDGYNMIAFWEETRQLFKTNQLDQARTVLLNKLNNYAHFEKIDIICVFDAQFVPGVR 64
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++++ I E AD++IE+ L V V TSD +Q + GA
Sbjct: 65 QRYDQYMISVIFTEEEETADSYIERTAAELNT-VLNLVEVATSDLNEQWTIFSKGALRVP 123
Query: 163 SKALVSEVSLI 173
++ L V+ +
Sbjct: 124 ARELERRVNTV 134
>gi|229083412|ref|ZP_04215760.1| hypothetical protein bcere0022_920 [Bacillus cereus Rock3-44]
gi|228699845|gb|EEL52482.1| hypothetical protein bcere0022_920 [Bacillus cereus Rock3-44]
Length = 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ +V++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQASRDALIDKMADYQGYTGTRVMIVFDAYTVQGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQLRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELEIEVQ 130
>gi|295396931|ref|ZP_06807054.1| tetracycline resistance protein [Aerococcus viridans ATCC 11563]
gi|294974824|gb|EFG50528.1| tetracycline resistance protein [Aerococcus viridans ATCC 11563]
Length = 179
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L+VDGYN+ G WP L + ++ AR L+ L + +++ V+FDA+ + G+
Sbjct: 8 LIVDGYNMIGSWPLLVKLKNRDEIEAARDLLLATLSNYVGYHDIETWVIFDAMFVPGISK 67
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++F + +VF E AD++IE+ IV L V V TSD +Q + GA S
Sbjct: 68 SYDQF-NLHVVFTSEGQTADSYIEEMIVDLVS-PLHNVTVATSDLAEQRIVFQKGALRQS 125
Query: 163 SKALVSEV 170
++ L +V
Sbjct: 126 AQELYRDV 133
>gi|417809917|ref|ZP_12456598.1| hypothetical protein LSGJ_00757 [Lactobacillus salivarius GJ-24]
gi|335350841|gb|EGM52337.1| hypothetical protein LSGJ_00757 [Lactobacillus salivarius GJ-24]
Length = 176
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YN+ G WP+L+ RL+ AR L++ L + +++VVFDA+ + G+
Sbjct: 5 ILIVDAYNMIGNWPQLDKLKKSDRLEDARDLLLKILSNYRKQANTEIIVVFDAIYVPGMT 64
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
E++ + +V+ E AD +IE + + +V V TSD +Q + GA
Sbjct: 65 KQYEQY-DLQVVWTAEDQTADTYIE-SLAGRLQTPLTQVRVATSDQAEQWTIFSQGAL 120
>gi|228995484|ref|ZP_04155152.1| hypothetical protein bmyco0003_870 [Bacillus mycoides Rock3-17]
gi|229003107|ref|ZP_04160956.1| hypothetical protein bmyco0002_960 [Bacillus mycoides Rock1-4]
gi|228758143|gb|EEM07339.1| hypothetical protein bmyco0002_960 [Bacillus mycoides Rock1-4]
gi|228764213|gb|EEM13092.1| hypothetical protein bmyco0003_870 [Bacillus mycoides Rock3-17]
Length = 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYNV G W L+ L +R LI+++ ++ +V++VFDA
Sbjct: 3 DILIVDGYNVIGAWRDLKK-LRDVDLQASRDALIDKMADYQGYTGTRVMIVFDAYTVQGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+I+F AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEIIFTRRNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVSLI 173
S++ L EV +
Sbjct: 121 SARELEIEVQAV 132
>gi|255070135|ref|XP_002507149.1| predicted protein [Micromonas sp. RCC299]
gi|226522424|gb|ACO68407.1| predicted protein [Micromonas sp. RCC299]
Length = 419
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 62/225 (27%)
Query: 6 TSYRRKKVE---KEELPEDTELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWP----- 57
+ YR+ K + +EEL + R ++ +D++ P +LVDGYN+CG
Sbjct: 123 SGYRKVKEDARYQEELAQRKAAKRAEAHTKT----LDSSRPTILVDGYNICGCAEGNDVA 178
Query: 58 -KLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEF----IGVD 112
+L+ F G L A++ LIEEL F++ +V VFDA + ++ G+
Sbjct: 179 VQLKQLFQAGDLQAAQKYLIEELENFAVHCGYTIVCVFDADRAQTKEKSDQIYRAGAGIW 238
Query: 113 IVFPGETCADAWIEKEIVA-----------LREDGCPK---------------------- 139
+VF AD+WIE+ +A L+ G P+
Sbjct: 239 VVFSVNNDADSWIEQASLAVLCGENSMEDFLQSFGQPRLGRSVKVKTIKNFKTKPPGPAG 298
Query: 140 ------------VWVVTSDHLQQHAAYGAGAFVWSSKALVSEVSL 172
+ V T+D+ + GA+V S+KAL+ E+S+
Sbjct: 299 SFPSRPNTLRQLILVATNDNALRSIVRSNGAYVISAKALIDEMSM 343
>gi|238926113|ref|ZP_04657873.1| protein of hypothetical function DUF901 [Selenomonas flueggei ATCC
43531]
gi|238886003|gb|EEQ49641.1| protein of hypothetical function DUF901 [Selenomonas flueggei ATCC
43531]
Length = 177
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
L+DGYNV WP+L ++ LD AR L+ L E+ ++ VVFDA + H
Sbjct: 11 LIDGYNVINAWPELIR--LRSNLDEARDVLVRILTEYGAFENYEMTVVFDAFATDEEEHA 68
Query: 106 EEF---IGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E + V GET AD+ IE+ G +V VVTSD +Q GAGA+ +
Sbjct: 69 VEISSRMRVIYTATGET-ADSCIERLAYTAVRMG-REVHVVTSDGAEQSLILGAGAYRIT 126
Query: 163 SKALVSEV 170
S L V
Sbjct: 127 SPELRRSV 134
>gi|229074154|ref|ZP_04207200.1| hypothetical protein bcere0024_800 [Bacillus cereus Rock4-18]
gi|229094815|ref|ZP_04225820.1| hypothetical protein bcere0020_810 [Bacillus cereus Rock3-29]
gi|229100892|ref|ZP_04231696.1| hypothetical protein bcere0019_970 [Bacillus cereus Rock3-28]
gi|229113769|ref|ZP_04243204.1| hypothetical protein bcere0017_820 [Bacillus cereus Rock1-3]
gi|407708041|ref|YP_006831626.1| GMP synthase large subunit [Bacillus thuringiensis MC28]
gi|423381860|ref|ZP_17359143.1| hypothetical protein IC9_05212 [Bacillus cereus BAG1O-2]
gi|423439729|ref|ZP_17416635.1| hypothetical protein IEA_00059 [Bacillus cereus BAG4X2-1]
gi|423450114|ref|ZP_17426992.1| hypothetical protein IEC_04721 [Bacillus cereus BAG5O-1]
gi|423467986|ref|ZP_17444754.1| hypothetical protein IEK_05173 [Bacillus cereus BAG6O-1]
gi|423537386|ref|ZP_17513804.1| hypothetical protein IGI_05218 [Bacillus cereus HuB2-9]
gi|423543114|ref|ZP_17519502.1| hypothetical protein IGK_05203 [Bacillus cereus HuB4-10]
gi|423543580|ref|ZP_17519938.1| hypothetical protein IGO_00015 [Bacillus cereus HuB5-5]
gi|423626965|ref|ZP_17602740.1| hypothetical protein IK3_05560 [Bacillus cereus VD148]
gi|228669640|gb|EEL25047.1| hypothetical protein bcere0017_820 [Bacillus cereus Rock1-3]
gi|228682471|gb|EEL36544.1| hypothetical protein bcere0019_970 [Bacillus cereus Rock3-28]
gi|228688558|gb|EEL42431.1| hypothetical protein bcere0020_810 [Bacillus cereus Rock3-29]
gi|228708924|gb|EEL61051.1| hypothetical protein bcere0024_800 [Bacillus cereus Rock4-18]
gi|401126737|gb|EJQ34471.1| hypothetical protein IEC_04721 [Bacillus cereus BAG5O-1]
gi|401166814|gb|EJQ74114.1| hypothetical protein IGK_05203 [Bacillus cereus HuB4-10]
gi|401187745|gb|EJQ94817.1| hypothetical protein IGO_00015 [Bacillus cereus HuB5-5]
gi|401250160|gb|EJR56464.1| hypothetical protein IK3_05560 [Bacillus cereus VD148]
gi|401628486|gb|EJS46327.1| hypothetical protein IC9_05212 [Bacillus cereus BAG1O-2]
gi|402411853|gb|EJV44216.1| hypothetical protein IEK_05173 [Bacillus cereus BAG6O-1]
gi|402421910|gb|EJV54154.1| hypothetical protein IEA_00059 [Bacillus cereus BAG4X2-1]
gi|402459092|gb|EJV90830.1| hypothetical protein IGI_05218 [Bacillus cereus HuB2-9]
gi|407385726|gb|AFU16227.1| hypothetical protein MC28_4805 [Bacillus thuringiensis MC28]
Length = 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IEK + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEKLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|420157212|ref|ZP_14664051.1| YacP-like NYN domain protein [Clostridium sp. MSTE9]
gi|394756650|gb|EJF39718.1| YacP-like NYN domain protein [Clostridium sp. MSTE9]
Length = 878
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ W +L+ + LD AR+ L++ L + R+ +V++VFDA T
Sbjct: 720 LLVDGYNIIFAWDELKA-VARESLDTARKLLMDLLSNYQGYRKCEVILVFDAYRVPRNTG 778
Query: 105 K-EEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + + + +V+ + ADA+IEK L + +V V TSD ++Q G GA S
Sbjct: 779 EVQRYHNISVVYTKQAETADAYIEKTTYELAKQ--YRVRVATSDGMEQMIILGHGALRVS 836
Query: 163 SKALVSEVSLI 173
++ E+ +I
Sbjct: 837 ARVFHQEMEMI 847
>gi|392330616|ref|ZP_10275231.1| putative cytosolic protein [Streptococcus canis FSL Z3-227]
gi|391418295|gb|EIQ81107.1| putative cytosolic protein [Streptococcus canis FSL Z3-227]
Length = 172
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W F +L+ AR L+ +L ++ ++ VFDA + GL
Sbjct: 5 ILLVDGYNMIAFWQSTRQLFKTNQLEQARNTLLTKLNHYAHFENSDIICVFDAQYVPGLR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ + V +VF E AD++IE+ L V V TSD +Q + GA
Sbjct: 65 QRYDHY-KVSVVFTEEEETADSYIERTAAELNT-AIHLVEVATSDLNEQWTIFSQGALRV 122
Query: 162 SSKALVSEVSLI 173
++K L V+ +
Sbjct: 123 TAKELEQRVNTV 134
>gi|313889602|ref|ZP_07823246.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
20026]
gi|416852434|ref|ZP_11909579.1| hypothetical protein STRPS_0634 [Streptococcus pseudoporcinus LQ
940-04]
gi|313122029|gb|EFR45124.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
20026]
gi|356739923|gb|EHI65155.1| hypothetical protein STRPS_0634 [Streptococcus pseudoporcinus LQ
940-04]
Length = 171
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
+LLVDGYN+ +W + F +LD AR L+ +L ++ ++ ++ VFDA + G+
Sbjct: 5 ILLVDGYNMIAFWEETRQLFKTNQLDQARTVLLSKLNNYAHFEKIDIICVFDAQFVPGVR 64
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
++++ + +VF E AD++IE+ L V V TSD +Q + GA
Sbjct: 65 QRYDQYM-ISVVFTEEEETADSYIERTAAEL-NTVLNLVEVATSDLNEQWTIFSKGALRV 122
Query: 162 SSKALVSEVSLI 173
++ L V+ +
Sbjct: 123 PARELERRVNTV 134
>gi|302670155|ref|YP_003830115.1| translation elongation factor EF-G-like protein [Butyrivibrio
proteoclasticus B316]
gi|302394628|gb|ADL33533.1| translation elongation factor EF-G-like protein [Butyrivibrio
proteoclasticus B316]
Length = 945
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ L++ L AR LI+++V F R +V++VFDA + G
Sbjct: 810 LLVDGYNIIYASDDLKS-LAATDLKAARDALIDKIVNFQGYRREQVILVFDAYRVRGGSE 868
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFVW 161
H E+ G+ +++ E AD +IEK A E G +V V TSD ++Q +GA
Sbjct: 869 HMEDHSGLTVIYTKEAETADQYIEK---AAHEIGKKYRVTVATSDAIEQVIVMSSGAIRL 925
Query: 162 SSKALVSEV 170
S++ EV
Sbjct: 926 SAREFWEEV 934
>gi|315651281|ref|ZP_07904309.1| tetracycline resistance protein TetP [Lachnoanaerobaculum saburreum
DSM 3986]
gi|315486433|gb|EFU76787.1| tetracycline resistance protein TetP [Lachnoanaerobaculum saburreum
DSM 3986]
Length = 869
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ + K + +D AR +L+E L+++ ++ ++++VFDA + PT
Sbjct: 701 LLVDGYNII-FASKSLSELADANIDAARDRLLELLIDYKAYKDYEIILVFDAYRLKNHPT 759
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
F GV +V+ AD +IEK + + V V TSD ++Q G GA + S
Sbjct: 760 EVLNFSGVYVVYTKTAETADQYIEKTTHEMIKK--YDVTVATSDGIEQIIIRGKGAILIS 817
Query: 163 SKALVSEV 170
++ + ++
Sbjct: 818 AREFLCDL 825
>gi|409989606|ref|ZP_11273145.1| hypothetical protein APPUASWS_02298 [Arthrospira platensis str.
Paraca]
gi|291567520|dbj|BAI89792.1| hypothetical protein [Arthrospira platensis NIES-39]
gi|409939529|gb|EKN80654.1| hypothetical protein APPUASWS_02298 [Arthrospira platensis str.
Paraca]
Length = 182
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VL VDGYN+ G WP L+ + AR+ LIE L+ +S + +VFDA P
Sbjct: 9 VLFVDGYNIIGIWPGLQQKRDGESTESARRHLIESLINYSAFEGLDARIVFDAHYQNTPG 68
Query: 104 HKEEF---IGVDIVFPGETCADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
E+ + + G+T AD +IEK + ++ V TSD QQ G G
Sbjct: 69 VSEKVSRNLLIHYTAYGQT-ADTYIEKMCASLRHKLRLSRRRLLVATSDRAQQLTVMGYG 127
Query: 158 AFVWSSKALVSEV 170
A W S +SE
Sbjct: 128 A-EWMSAMQLSEA 139
>gi|428222894|ref|YP_007107064.1| putative RNA-binding protein containing a PIN domain [Synechococcus
sp. PCC 7502]
gi|427996234|gb|AFY74929.1| putative RNA-binding protein containing a PIN domain [Synechococcus
sp. PCC 7502]
Length = 179
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
PV+LVD YN+ G W L+ G D AR +L E + +S + +VFDA P
Sbjct: 5 PVMLVDAYNIIGAWASLKRWRDLGDFDAARTELTEIMAGYSSYHGYQSTLVFDAYNVPTP 64
Query: 103 THKEEFI-GVDIVFPG-ETCADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
E+ + + F AD++IEK E+ +V VVTSD Q G G
Sbjct: 65 AVTEKVTKNLKLHFTNHRQTADSYIEKCCAEVHRHPLRHLKRVIVVTSDRAQHLTTTGFG 124
Query: 158 AFVWSSKALVSEVSL 172
A S+ AL EV L
Sbjct: 125 AEWMSALALEQEVEL 139
>gi|260587258|ref|ZP_05853171.1| tetracycline resistance protein TetP [Blautia hansenii DSM 20583]
gi|260542453|gb|EEX23022.1| tetracycline resistance protein TetP [Blautia hansenii DSM 20583]
Length = 897
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 22/189 (11%)
Query: 4 PSTSYRRKKVEKEELPED-TELYRFFSYIYNTNQGIDNAV--------PV--------LL 46
P TS+ + +++++EL E T Y N Q V PV LL
Sbjct: 670 PRTSFSQIRLDEQELEEIFTRTYGPIKRERNGFQKTSRTVTAKAGESRPVKKQPEKEYLL 729
Query: 47 VDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPTHK 105
VDGYN+ W L N K ++ AR KL++ L + ++ +++VFDA + G
Sbjct: 730 VDGYNIIFAWEDL-NELAKVNIEAARSKLMDILCNYQGYKKCTLILVFDAYKVEGNQGSI 788
Query: 106 EEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSK 164
+++ + +V+ E AD +IEK + + V V TSD ++Q G GA S+K
Sbjct: 789 QKYHNIHVVYTKEAETADQYIEKTVHEIGRK--YHVTVATSDAMEQVIILGQGASRMSAK 846
Query: 165 ALVSEVSLI 173
L+ E+ +
Sbjct: 847 NLLEEIGYM 855
>gi|457094295|gb|EMG24824.1| Hypothetical protein SPJ1_1695 [Streptococcus parauberis KRS-02083]
Length = 170
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
++LVDGYN+ +W + + F +LD AR L+ +L ++ ++++V VFDA + G+
Sbjct: 5 IMLVDGYNMIAFWQETKQLFKTNQLDQARTILLNKLNNYAHFEKIEIVCVFDAQFVPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
++++ + +VF E AD++IE+ E+ +R V V TSD +Q + GA
Sbjct: 65 QRYDQYM-ISVVFTEEDETADSYIERTAAELNTVRN----LVEVATSDLNEQWTIFSQGA 119
Query: 159 FVWSSKALVSEVSLI 173
++ L V+ +
Sbjct: 120 LRVPARELERRVNTV 134
>gi|423620299|ref|ZP_17596130.1| hypothetical protein IIO_05622 [Bacillus cereus VD115]
gi|401248859|gb|EJR55180.1| hypothetical protein IIO_05622 [Bacillus cereus VD115]
Length = 170
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ + KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMANYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IEK + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEKLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|384456443|ref|YP_005669041.1| tetracycline resistance protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|418015518|ref|ZP_12655083.1| DUF901 domain-containing protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|345505853|gb|EGX28147.1| DUF901 domain-containing protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984789|dbj|BAK80465.1| tetracycline resistance protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
Length = 183
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 37 GIDNAVPVLLVDGYNVCGYWPKLENHFIKGRLD--VARQKLIEELVEFSMIREVKVVVVF 94
GID V ++ VD YNV WP +N LD + R+KLI + +++ +V ++F
Sbjct: 9 GID-TVKIIFVDAYNVINSWPNFKNS---RDLDFSIVREKLISMVESYALFNGYRVFLIF 64
Query: 95 DALMSGLPTHKEEFI--GVDIVFPG-ETCADAWIEKEIVALREDGCPKVWVVTSDHLQQH 151
DA S ++ I + I++ + AD +IE+ +A + ++ VVTSD+++Q
Sbjct: 65 DAYNSDSTNERKIDISDNLSIIYTNKDEFADTYIER--IAHKMAKKVEIIVVTSDYMEQQ 122
Query: 152 AAYGAGAFVWS 162
+ GA+ S
Sbjct: 123 IIFQRGAYRMS 133
>gi|331083575|ref|ZP_08332686.1| hypothetical protein HMPREF0992_01610 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330403786|gb|EGG83338.1| hypothetical protein HMPREF0992_01610 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 884
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L N K ++ AR KL++ L + ++ +++VFDA + G
Sbjct: 715 LLVDGYNIIFAWEDL-NELAKVNIEAARSKLMDILCNYQGYKKCTLILVFDAYKVEGNQG 773
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ + +V+ E AD +IEK + + V V TSD ++Q G GA S
Sbjct: 774 SIQKYHNIHVVYTKEAETADQYIEKTVHEIGRK--YHVTVATSDAMEQVIILGQGASRMS 831
Query: 163 SKALVSEVSLI 173
+K L+ E+ +
Sbjct: 832 AKNLLEEIGYM 842
>gi|347543091|ref|YP_004857729.1| tetracycline resistance protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346986128|dbj|BAK81803.1| tetracycline resistance protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 183
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 37 GIDNAVPVLLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFD 95
GID V ++ VD YNV WP +N IK D+ R KLI + +++ K+ ++FD
Sbjct: 9 GID-IVKIIFVDAYNVINSWPNFKN--IKDLDFDIIRDKLINVIENYAVFNGYKIFLIFD 65
Query: 96 ALMSGLPTHKEEFI--GVDIVFPG-ETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHA 152
A S ++ I + +++ + AD +IEK + ++ VVTSD ++Q
Sbjct: 66 AYNSNSTGERKLEISDNLSVIYTNKDEFADTYIEK--IVHNTAKKVEIIVVTSDFMEQQI 123
Query: 153 AYGAGAFVWSSKALVSEV 170
+ GA+ SS +V
Sbjct: 124 IFQRGAYRMSSLEFYDDV 141
>gi|291562553|emb|CBL41369.1| small GTP-binding protein domain [butyrate-producing bacterium
SS3/4]
Length = 967
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L + +D AR KL++ L + R++ V+VVFDA + G
Sbjct: 797 LLVDGYNIIFAWEELSD-LAAVSIDAARYKLMDILSNYQGFRKICVIVVFDAYKVPGGVE 855
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ +++V+ E AD +IEK VA+R + V TSD + Q G +WS
Sbjct: 856 KVQKYHNINVVYTKEAETADQYIEK--VAIRIGRRYRTTVATSDGVIQLIIRSQGCILWS 913
Query: 163 SKALVSEVSLI 173
++ E+ +
Sbjct: 914 ARDFREEIERV 924
>gi|283795467|ref|ZP_06344620.1| tetracycline resistance protein [Clostridium sp. M62/1]
gi|291077129|gb|EFE14493.1| hypothetical protein CLOM621_05324 [Clostridium sp. M62/1]
Length = 177
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L+ + +D AR KL + L + ++ V++VFD + G P
Sbjct: 6 LLVDGYNIIFAWTDLKK-IAEQNIDSARTKLQDILCNYQGFKKCNVILVFDGYKVKGNPG 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFVW 161
++ + ++F E AD +IEK +E G V V TSD L+Q G GA
Sbjct: 65 SVIKYHNIHVIFTKEAETADQYIEK---VTQEIGRQYHVRVATSDRLEQVIILGKGAVRM 121
Query: 162 SSKALVSEV 170
S+K L E+
Sbjct: 122 SAKDLEKEI 130
>gi|169350591|ref|ZP_02867529.1| hypothetical protein CLOSPI_01360 [Clostridium spiroforme DSM 1552]
gi|169292911|gb|EDS75044.1| putative translation elongation factor G [Clostridium spiroforme
DSM 1552]
Length = 851
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 81/191 (42%), Gaps = 31/191 (16%)
Query: 3 RPSTSYRRKKVEKEELP-EDTELYRFFSYIYN----------TNQGIDNAV-----PVLL 46
+P KK+EK ED EL F Y T + I N LL
Sbjct: 637 KPKNENIEKKIEKTTYSNEDEELENIFIRTYGPIKQHQTNTLTKKIISNTTYKYMPECLL 696
Query: 47 VDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA------LMSG 100
VDGYN+ WP+L+ K LD AR +LI+ + + ++ +++VFDA L S
Sbjct: 697 VDGYNIIHSWPELK-ELAKDNLDAARTRLIDIMCNYQGYKKCILILVFDAYKVKNNLGSS 755
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
H + IV+ E AD +IE+ L + V TSD L+Q G G
Sbjct: 756 YKYHN-----IYIVYTKEAQTADMYIERTTHELASK--YNITVATSDALEQLIVLGQGGK 808
Query: 160 VWSSKALVSEV 170
SS+ L EV
Sbjct: 809 RISSRELRLEV 819
>gi|317501948|ref|ZP_07960132.1| tetracycline resistance protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088236|ref|ZP_08337155.1| hypothetical protein HMPREF1025_00738 [Lachnospiraceae bacterium
3_1_46FAA]
gi|316896628|gb|EFV18715.1| tetracycline resistance protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|330408480|gb|EGG87946.1| hypothetical protein HMPREF1025_00738 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 921
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L+ K L AR KL + L + ++ ++++VFDA + G P
Sbjct: 749 LLVDGYNIIFAWDSLKE-LAKIDLAAARGKLADILCNYQGYKQCELILVFDAYKVEGNPG 807
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IEK + + ++ V V TSD L+Q G GA S
Sbjct: 808 EIMKYHNIHVVYTREAETADHYIEKTVRRIAKE--HDVIVATSDALEQVIIMGQGAHRMS 865
Query: 163 SKALVSEVSLII 174
+ L E+ +I
Sbjct: 866 AAGLKEEIESVI 877
>gi|168334504|ref|ZP_02692670.1| small GTP-binding protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 851
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMSGLP 102
+LVD YNV + LD AR L++EL + ++ +++ VFDA + G+
Sbjct: 699 ILVDAYNVIFAHTDFR-ELMNKNLDSARIALLDELTNYQALKRCEIIAVFDAYKVKGGVE 757
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
T E++ + +VF E AD +IE+ + ++ ++ VVTSDHL+Q G GA V
Sbjct: 758 T-MEKYHNIYVVFTKEAQTADHYIERFVHQNVKEA--RITVVTSDHLEQLIIIGKGANVM 814
Query: 162 SSK 164
S+K
Sbjct: 815 SAK 817
>gi|160941205|ref|ZP_02088542.1| hypothetical protein CLOBOL_06098 [Clostridium bolteae ATCC
BAA-613]
gi|158435766|gb|EDP13533.1| hypothetical protein CLOBOL_06098 [Clostridium bolteae ATCC
BAA-613]
Length = 923
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L + +D AR +L++ L + IR+ ++VVFDA ++G T
Sbjct: 755 LLVDGYNIIFAWEEL-RELAQDNMDGARGRLMDLLCNYQAIRKCCLMVVFDAYRVTGHAT 813
Query: 104 HKEEFIGVDIVFPGET-CADAWIEK--EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
E+ + +V+ E AD +IEK A R D V V TSD ++Q G G +
Sbjct: 814 EVSEYHNIQVVYTKEAETADQYIEKFAHENARRFD----VSVATSDGVEQVIILGQGCRL 869
Query: 161 WSSKALVSEVSLI 173
S++ L E+ +
Sbjct: 870 ISARELKEELDRV 882
>gi|153813803|ref|ZP_01966471.1| hypothetical protein RUMTOR_00009 [Ruminococcus torques ATCC 27756]
gi|145848199|gb|EDK25117.1| putative translation elongation factor G [Ruminococcus torques ATCC
27756]
Length = 883
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L+ K L AR KL + L + ++ ++++VFDA + G P
Sbjct: 711 LLVDGYNIIFAWDSLKE-LAKIDLAAARGKLADILCNYQGYKQCELILVFDAYKVEGNPG 769
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IEK + + ++ V V TSD L+Q G GA S
Sbjct: 770 EIMKYHNIHVVYTREAETADHYIEKTVRRIAKE--HDVIVATSDALEQVIIMGQGAHRMS 827
Query: 163 SKALVSEVSLII 174
+ L E+ +I
Sbjct: 828 AAGLKEEIESVI 839
>gi|228989301|ref|ZP_04149292.1| hypothetical protein bpmyx0001_780 [Bacillus pseudomycoides DSM
12442]
gi|228770379|gb|EEM18952.1| hypothetical protein bpmyx0001_780 [Bacillus pseudomycoides DSM
12442]
Length = 170
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYNV G W L+ L +R LI+++ ++ +V++VFDA
Sbjct: 3 DILIVDGYNVIGAWRDLK-KLRDVDLQASRDALIDKMADYQGYTGTRVMIVFDAYTVQGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRRNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVSLI 173
S++ L EV +
Sbjct: 121 SARELEIEVQAV 132
>gi|423387421|ref|ZP_17364675.1| hypothetical protein ICE_05165 [Bacillus cereus BAG1X1-2]
gi|401629004|gb|EJS46832.1| hypothetical protein ICE_05165 [Bacillus cereus BAG1X1-2]
Length = 170
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVLIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTRIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|323703774|ref|ZP_08115412.1| protein of unknown function DUF901 [Desulfotomaculum nigrificans
DSM 574]
gi|333922428|ref|YP_004496008.1| hypothetical protein Desca_0192 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323531243|gb|EGB21144.1| protein of unknown function DUF901 [Desulfotomaculum nigrificans
DSM 574]
gi|333747989|gb|AEF93096.1| protein of unknown function DUF901 [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 170
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
+VDGYNV WP+ + G LD R KL++ L F+ +V VVFDA + +
Sbjct: 6 VVDGYNVIHAWPEFDELKDNG-LDHCRDKLVDILSNFAAFSGSQVKVVFDAHLVKKGIER 64
Query: 106 EEFI-GVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E I G+++ + GET AD+ IE+ + L + G V+VVT D +Q +G GA+ +
Sbjct: 65 WEIINGIEVFYSQEGET-ADSLIERIVGDLSKLGT--VYVVTFDWDEQRIIFGRGAYRIT 121
Query: 163 SKALVSEV 170
K +++V
Sbjct: 122 PKEFLAQV 129
>gi|299143772|ref|ZP_07036852.1| tetracycline resistance protein [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518257|gb|EFI41996.1| tetracycline resistance protein [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 177
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM-SGLPT 103
L VDGYN+ W +N+ + L+ R++LI+ L E+S + + K+++VFD M P
Sbjct: 13 LFVDGYNIINSWEVFKNY--REDLEEQRKRLIDILSEYSHVIQEKIILVFDGYMVKKSPG 70
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E + +VF E AD +IE+++ + K+ V TSD+++Q G S
Sbjct: 71 AIYEHDNILVVFTRELETADHFIERQLDEM--GRVRKIRVATSDNIEQQIILSRGGIRIS 128
Query: 163 SKALVSEV 170
++ EV
Sbjct: 129 AREFEVEV 136
>gi|443314316|ref|ZP_21043885.1| putative RNA-binding protein containing a PIN domain [Leptolyngbya
sp. PCC 6406]
gi|442786091|gb|ELR95862.1| putative RNA-binding protein containing a PIN domain [Leptolyngbya
sp. PCC 6406]
Length = 181
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
V +L VDGYN+ G P+L + L+ AR +L E LV ++ ++ +V ++FDA
Sbjct: 7 VALLFVDGYNIIGACPQLTQVRDQSGLESARHQLAESLVNYAAYKDFEVRLIFDAYAQPN 66
Query: 102 PTHKE---EFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
P E + + GET AD +IE LR ++ V TSD Q+ G GA
Sbjct: 67 PRAIEPITHHLSIHYTAFGET-ADTYIECWCARLRHHDQRRI-VATSDRAQRLTVIGYGA 124
Query: 159 FVWSSKALVSEVSLII 174
S+ L +++ ++
Sbjct: 125 EWMSAHQLAIDMTTLL 140
>gi|315301172|ref|ZP_07872438.1| YacP, partial [Listeria ivanovii FSL F6-596]
gi|313630459|gb|EFR98326.1| YacP [Listeria ivanovii FSL F6-596]
Length = 93
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+LLVDGYNV G WP+L ++K R L+ AR KLIE + E+ +VVVVFDA
Sbjct: 4 QILLVDGYNVIGAWPELS--YLKDRDLEAARDKLIEWMAEYQSYTGYRVVVVFDAQFVRG 61
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIV 130
K V++VF E AD +IE++ +
Sbjct: 62 VKRKSMKHQVEVVFTHEDETADEFIEQKAI 91
>gi|229027940|ref|ZP_04184093.1| hypothetical protein bcere0028_790 [Bacillus cereus AH1271]
gi|229170944|ref|ZP_04298545.1| hypothetical protein bcere0006_800 [Bacillus cereus MM3]
gi|423405183|ref|ZP_17382356.1| hypothetical protein ICW_05581 [Bacillus cereus BAG2X1-2]
gi|423462633|ref|ZP_17439427.1| hypothetical protein IEI_05770 [Bacillus cereus BAG5X2-1]
gi|423480026|ref|ZP_17456740.1| hypothetical protein IEO_05483 [Bacillus cereus BAG6X1-1]
gi|228612484|gb|EEK69705.1| hypothetical protein bcere0006_800 [Bacillus cereus MM3]
gi|228733328|gb|EEL84157.1| hypothetical protein bcere0028_790 [Bacillus cereus AH1271]
gi|401130812|gb|EJQ38468.1| hypothetical protein IEI_05770 [Bacillus cereus BAG5X2-1]
gi|401645553|gb|EJS63208.1| hypothetical protein ICW_05581 [Bacillus cereus BAG2X1-2]
gi|402424010|gb|EJV56206.1| hypothetical protein IEO_05483 [Bacillus cereus BAG6X1-1]
Length = 170
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVQGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|373470198|ref|ZP_09561342.1| elongation factor G [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371762964|gb|EHO51465.1| elongation factor G [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 462
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYNV + K + +D AR +L+E L+++ +E ++++VFDA L H
Sbjct: 294 LLVDGYNVI-FASKSLSELADTNIDAARDRLLELLIDYKAYKEYEIILVFDAYR--LKNH 350
Query: 105 KEE---FIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
E F GV +V+ AD +IEK + + V V TSD ++Q G GA +
Sbjct: 351 DTEILNFSGVYVVYTKTAETADQYIEKTTHEMMKK--YDVTVATSDGIEQIIIRGKGAIL 408
Query: 161 WSSKALVSEV 170
S++ + ++
Sbjct: 409 ISAREFLCDL 418
>gi|218895228|ref|YP_002443639.1| hypothetical protein BCG9842_B5213 [Bacillus cereus G9842]
gi|228898846|ref|ZP_04063128.1| hypothetical protein bthur0014_800 [Bacillus thuringiensis IBL
4222]
gi|228905890|ref|ZP_04069787.1| hypothetical protein bthur0013_810 [Bacillus thuringiensis IBL 200]
gi|228937395|ref|ZP_04100041.1| hypothetical protein bthur0008_800 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228963193|ref|ZP_04124362.1| hypothetical protein bthur0004_840 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228970281|ref|ZP_04130940.1| hypothetical protein bthur0003_790 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976851|ref|ZP_04137263.1| hypothetical protein bthur0002_790 [Bacillus thuringiensis Bt407]
gi|384184177|ref|YP_005570073.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402562816|ref|YP_006605540.1| cytoplasmic protein [Bacillus thuringiensis HD-771]
gi|410672464|ref|YP_006924835.1| uncharacterized protein YacP [Bacillus thuringiensis Bt407]
gi|423364483|ref|ZP_17341973.1| hypothetical protein IC1_06450 [Bacillus cereus VD022]
gi|423526609|ref|ZP_17503054.1| hypothetical protein IGE_00161 [Bacillus cereus HuB1-1]
gi|423565549|ref|ZP_17541825.1| hypothetical protein II5_04953 [Bacillus cereus MSX-A1]
gi|434378735|ref|YP_006613379.1| putative cytoplasmic protein [Bacillus thuringiensis HD-789]
gi|452196470|ref|YP_007476551.1| hypothetical protein H175_ch0089 [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|218545585|gb|ACK97979.1| conserved hypothetical protein [Bacillus cereus G9842]
gi|228782821|gb|EEM30987.1| hypothetical protein bthur0002_790 [Bacillus thuringiensis Bt407]
gi|228789390|gb|EEM37310.1| hypothetical protein bthur0003_790 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228796451|gb|EEM43890.1| hypothetical protein bthur0004_840 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228822228|gb|EEM68210.1| hypothetical protein bthur0008_800 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228853705|gb|EEM98465.1| hypothetical protein bthur0013_810 [Bacillus thuringiensis IBL 200]
gi|228860746|gb|EEN05124.1| hypothetical protein bthur0014_800 [Bacillus thuringiensis IBL
4222]
gi|326937886|gb|AEA13782.1| putative cytoplasmic protein [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401072902|gb|EJP81356.1| hypothetical protein IC1_06450 [Bacillus cereus VD022]
gi|401193751|gb|EJR00754.1| hypothetical protein II5_04953 [Bacillus cereus MSX-A1]
gi|401791468|gb|AFQ17507.1| putative cytoplasmic protein [Bacillus thuringiensis HD-771]
gi|401877292|gb|AFQ29459.1| putative cytoplasmic protein [Bacillus thuringiensis HD-789]
gi|402455649|gb|EJV87430.1| hypothetical protein IGE_00161 [Bacillus cereus HuB1-1]
gi|409171593|gb|AFV15898.1| uncharacterized protein YacP [Bacillus thuringiensis Bt407]
gi|452101863|gb|AGF98802.1| hypothetical protein H175_ch0089 [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 170
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTRIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|282882298|ref|ZP_06290929.1| RNA-binding protein [Peptoniphilus lacrimalis 315-B]
gi|300813893|ref|ZP_07094197.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|281297848|gb|EFA90313.1| RNA-binding protein [Peptoniphilus lacrimalis 315-B]
gi|300511956|gb|EFK39152.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 175
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM---SGL 101
L VD YN+ +WP L L+ +R I++++EFS + K+++VFDA + SG
Sbjct: 13 LFVDAYNMINFWPDLV-KLKDINLEDSRICFIDKMIEFSHFTKEKIILVFDAYLVKGSGG 71
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+K++ G+ IVF E AD +IE+E+ + V V TSD Q G
Sbjct: 72 KIYKKD--GIVIVFTKENERADHYIERELDMIGR--LRNVRVATSDATIQEIILSRGGTR 127
Query: 161 WSSKALVSEV 170
S++ L++EV
Sbjct: 128 ISARELLAEV 137
>gi|319936370|ref|ZP_08010786.1| tetracycline resistance protein TetP [Coprobacillus sp. 29_1]
gi|319808485|gb|EFW05037.1| tetracycline resistance protein TetP [Coprobacillus sp. 29_1]
Length = 592
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMSGLP 102
LLVDGYN+ WP+L+ + L+ AR +L++ + + ++ ++VVFDA + L
Sbjct: 436 LLVDGYNIIHAWPELKALAVDN-LEGARFRLLDMMCNYQGYKKCLLIVVFDAYKVKQNLG 494
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
T E++ + +V+ E+ AD +IE+ V + V TSD L+Q GAGA+
Sbjct: 495 T-SEQYHNIHVVYTKESQTADMYIER--VTHEMASQYHMTVATSDALEQLIITGAGAYRM 551
Query: 162 SSKALVSEV 170
S++ L ++
Sbjct: 552 SARELKQDL 560
>gi|257438834|ref|ZP_05614589.1| elongation factor G [Faecalibacterium prausnitzii A2-165]
gi|257198743|gb|EEU97027.1| putative translation elongation factor G [Faecalibacterium
prausnitzii A2-165]
Length = 865
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L N K L+ AR +L++ L + ++ +++VFDA + G P
Sbjct: 726 LLVDGYNIIFAWDEL-NALSKESLEAARHRLMDILCNYQGFKKCVLILVFDAYRVPGSPG 784
Query: 104 HKEEFIGVDIVFPGET-CADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
E++ + +V+ E AD +IE+ EI R +V V TSD ++Q G GA
Sbjct: 785 SIEQYHNIHVVYTREAETADMFIERVTHEIGKGR-----RVRVATSDGMEQVIILGHGAL 839
Query: 160 VWSSKALVSEVS 171
S++ EV
Sbjct: 840 RVSARMFHEEVQ 851
>gi|310659525|ref|YP_003937246.1| conserved protein of unknown function [[Clostridium] sticklandii]
gi|308826303|emb|CBH22341.1| conserved protein of unknown function [[Clostridium] sticklandii]
Length = 179
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L+VDGYNV W L N K L+ AR KL L E++ + +VV+DA T
Sbjct: 9 LIVDGYNVINAWSDL-NEIAKVDLEGARDKLNFILGEYAAFSGIFTIVVYDAYRVKAHTK 67
Query: 105 KEEFIG-VDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+EE +G + IV+ E AD++IEK I + V + D +Q G G +
Sbjct: 68 REEEVGNLKIVYTKEKQTADSYIEKLITEFGPKKHLSIRVASDDMAEQQMVLGKGGSRIT 127
Query: 163 SKALVSEVS 171
++ L EV
Sbjct: 128 TRELNIEVQ 136
>gi|423614617|ref|ZP_17590474.1| hypothetical protein IIM_05328 [Bacillus cereus VD107]
gi|401237461|gb|EJR43913.1| hypothetical protein IIM_05328 [Bacillus cereus VD107]
Length = 170
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELRSINT-QIYVATSDYTEQWVVFAQGALRK 120
Query: 162 SSKALVSEVSLI 173
S++ L EV +
Sbjct: 121 SARELELEVQAM 132
>gi|357055318|ref|ZP_09116390.1| hypothetical protein HMPREF9467_03362 [Clostridium clostridioforme
2_1_49FAA]
gi|355382957|gb|EHG30047.1| hypothetical protein HMPREF9467_03362 [Clostridium clostridioforme
2_1_49FAA]
Length = 938
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L + +D AR +L++ L + IR ++VVFDA ++G T
Sbjct: 755 LLVDGYNIIFAWEEL-RELARDNMDGARGRLMDLLCNYQAIRRCCLMVVFDAYRVAGHVT 813
Query: 104 HKEEFIGVDIVFPGET-CADAWIEK--EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
E+ + +V+ E AD +IEK A R D V V TSD ++Q G G +
Sbjct: 814 EVSEYHNIQVVYTKEAETADQYIEKFAHENARRFD----VSVATSDGVEQVIILGQGCRL 869
Query: 161 WSSKALVSEVSLI 173
S++ L E+ +
Sbjct: 870 ISARELKEELDRV 882
>gi|229159266|ref|ZP_04287290.1| hypothetical protein bcere0009_790 [Bacillus cereus R309803]
gi|228624158|gb|EEK80960.1| hypothetical protein bcere0009_790 [Bacillus cereus R309803]
Length = 170
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|225573135|ref|ZP_03781890.1| hypothetical protein RUMHYD_01326 [Blautia hydrogenotrophica DSM
10507]
gi|225039490|gb|EEG49736.1| putative translation elongation factor G [Blautia hydrogenotrophica
DSM 10507]
Length = 899
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L+ + +D AR KL++ L + ++ +++VFDA + G
Sbjct: 730 LLVDGYNIIFAWEDLKE-LAEVNIDGARTKLMDILCNYQGYKKCVLILVFDAYKVEGHEC 788
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFVW 161
++ + +V+ E AD +IEK + E G +V V TSD L+Q G GA +
Sbjct: 789 EVTDYHNIHVVYTKEAETADQYIEK---VVHEIGRKYQVTVATSDGLEQVIIRGQGASLL 845
Query: 162 SSKALVSEVSLI 173
S++ L E+SL+
Sbjct: 846 SARELREEISLV 857
>gi|402554321|ref|YP_006595592.1| Yacp-like protein [Bacillus cereus FRI-35]
gi|401795531|gb|AFQ09390.1| Yacp-like protein [Bacillus cereus FRI-35]
Length = 170
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVSLI 173
S++ L EV +
Sbjct: 121 SARELELEVQAM 132
>gi|229194483|ref|ZP_04321286.1| hypothetical protein bcere0001_790 [Bacillus cereus m1293]
gi|228588949|gb|EEK46964.1| hypothetical protein bcere0001_790 [Bacillus cereus m1293]
Length = 170
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVSLI 173
S++ L EV +
Sbjct: 121 SARELELEVQAM 132
>gi|30260283|ref|NP_842660.1| hypothetical protein BA_0092 [Bacillus anthracis str. Ames]
gi|42779173|ref|NP_976420.1| hypothetical protein BCE_0092 [Bacillus cereus ATCC 10987]
gi|47525347|ref|YP_016696.1| hypothetical protein GBAA_0092 [Bacillus anthracis str. 'Ames
Ancestor']
gi|47569827|ref|ZP_00240497.1| Yacp-like protein [Bacillus cereus G9241]
gi|49183126|ref|YP_026378.1| hypothetical protein BAS0092 [Bacillus anthracis str. Sterne]
gi|49479929|ref|YP_034445.1| hypothetical protein BT9727_0089 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145124|ref|YP_081704.1| hypothetical protein BCZK0088 [Bacillus cereus E33L]
gi|65317553|ref|ZP_00390512.1| COG3688: Predicted RNA-binding protein containing a PIN domain
[Bacillus anthracis str. A2012]
gi|165873143|ref|ZP_02217759.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167635070|ref|ZP_02393387.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167641954|ref|ZP_02400189.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170689568|ref|ZP_02880754.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170707545|ref|ZP_02897998.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177655598|ref|ZP_02936979.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190569005|ref|ZP_03021906.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|217957668|ref|YP_002336212.1| hypothetical protein BCAH187_A0123 [Bacillus cereus AH187]
gi|218901295|ref|YP_002449129.1| hypothetical protein BCAH820_0103 [Bacillus cereus AH820]
gi|222093863|ref|YP_002527913.1| yacp [Bacillus cereus Q1]
gi|227812766|ref|YP_002812775.1| hypothetical protein BAMEG_0108 [Bacillus anthracis str. CDC 684]
gi|228912832|ref|ZP_04076479.1| hypothetical protein bthur0012_810 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228925346|ref|ZP_04088442.1| hypothetical protein bthur0010_800 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931595|ref|ZP_04094501.1| hypothetical protein bthur0009_880 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943899|ref|ZP_04106284.1| hypothetical protein bthur0007_800 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228983348|ref|ZP_04143561.1| hypothetical protein bthur0001_790 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089224|ref|ZP_04220505.1| hypothetical protein bcere0021_790 [Bacillus cereus Rock3-42]
gi|229119755|ref|ZP_04249016.1| hypothetical protein bcere0016_800 [Bacillus cereus 95/8201]
gi|229136939|ref|ZP_04265566.1| hypothetical protein bcere0013_830 [Bacillus cereus BDRD-ST26]
gi|229153871|ref|ZP_04282001.1| hypothetical protein bcere0010_780 [Bacillus cereus ATCC 4342]
gi|229600050|ref|YP_002864744.1| hypothetical protein BAA_0108 [Bacillus anthracis str. A0248]
gi|254684404|ref|ZP_05148264.1| hypothetical protein BantC_11151 [Bacillus anthracis str.
CNEVA-9066]
gi|254724233|ref|ZP_05186018.1| hypothetical protein BantA1_17458 [Bacillus anthracis str. A1055]
gi|254733753|ref|ZP_05191468.1| hypothetical protein BantWNA_01102 [Bacillus anthracis str. Western
North America USA6153]
gi|254744605|ref|ZP_05202284.1| hypothetical protein BantKB_26991 [Bacillus anthracis str. Kruger
B]
gi|254756309|ref|ZP_05208338.1| hypothetical protein BantV_27922 [Bacillus anthracis str. Vollum]
gi|254758387|ref|ZP_05210414.1| hypothetical protein BantA9_08755 [Bacillus anthracis str.
Australia 94]
gi|300119597|ref|ZP_07057141.1| hypothetical protein BCSJ1_28257 [Bacillus cereus SJ1]
gi|301051830|ref|YP_003790041.1| hypothetical protein BACI_c01190 [Bacillus cereus biovar anthracis
str. CI]
gi|375282190|ref|YP_005102625.1| hypothetical protein BCN_0092 [Bacillus cereus NC7401]
gi|386733959|ref|YP_006207140.1| Yacp-like protein [Bacillus anthracis str. H9401]
gi|421510418|ref|ZP_15957311.1| Yacp-like protein [Bacillus anthracis str. UR-1]
gi|421640506|ref|ZP_16081088.1| Yacp-like protein [Bacillus anthracis str. BF1]
gi|423357616|ref|ZP_17335211.1| hypothetical protein IAU_05660 [Bacillus cereus IS075]
gi|423376315|ref|ZP_17353629.1| hypothetical protein IC5_05345 [Bacillus cereus AND1407]
gi|423553973|ref|ZP_17530300.1| hypothetical protein IGW_04604 [Bacillus cereus ISP3191]
gi|423572084|ref|ZP_17548298.1| hypothetical protein II7_05274 [Bacillus cereus MSX-A12]
gi|423578055|ref|ZP_17554174.1| hypothetical protein II9_05276 [Bacillus cereus MSX-D12]
gi|423608082|ref|ZP_17583975.1| hypothetical protein IIK_04663 [Bacillus cereus VD102]
gi|30253604|gb|AAP24146.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|42735088|gb|AAS39028.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|47500495|gb|AAT29171.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|47553520|gb|EAL11901.1| Yacp-like protein [Bacillus cereus G9241]
gi|49177053|gb|AAT52429.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49331485|gb|AAT62131.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51978593|gb|AAU20143.1| conserved hypothetical protein [Bacillus cereus E33L]
gi|164711123|gb|EDR16684.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167510085|gb|EDR85496.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167529544|gb|EDR92294.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170127541|gb|EDS96415.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170666481|gb|EDT17258.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172080062|gb|EDT65160.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190559929|gb|EDV13913.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|217066160|gb|ACJ80410.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|218539828|gb|ACK92226.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|221237911|gb|ACM10621.1| YacP [Bacillus cereus Q1]
gi|227007806|gb|ACP17549.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|228629552|gb|EEK86249.1| hypothetical protein bcere0010_780 [Bacillus cereus ATCC 4342]
gi|228646477|gb|EEL02684.1| hypothetical protein bcere0013_830 [Bacillus cereus BDRD-ST26]
gi|228663656|gb|EEL19235.1| hypothetical protein bcere0016_800 [Bacillus cereus 95/8201]
gi|228694063|gb|EEL47745.1| hypothetical protein bcere0021_790 [Bacillus cereus Rock3-42]
gi|228776338|gb|EEM24691.1| hypothetical protein bthur0001_790 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228815732|gb|EEM61968.1| hypothetical protein bthur0007_800 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228828023|gb|EEM73751.1| hypothetical protein bthur0009_880 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834268|gb|EEM79809.1| hypothetical protein bthur0010_800 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846768|gb|EEM91773.1| hypothetical protein bthur0012_810 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229264458|gb|ACQ46095.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|298723069|gb|EFI63967.1| hypothetical protein BCSJ1_28257 [Bacillus cereus SJ1]
gi|300373999|gb|ADK02903.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
gi|358350713|dbj|BAL15885.1| conserved hypothetical protein [Bacillus cereus NC7401]
gi|384383811|gb|AFH81472.1| Yacp-like protein [Bacillus anthracis str. H9401]
gi|401074482|gb|EJP82882.1| hypothetical protein IAU_05660 [Bacillus cereus IS075]
gi|401088772|gb|EJP96954.1| hypothetical protein IC5_05345 [Bacillus cereus AND1407]
gi|401182180|gb|EJQ89319.1| hypothetical protein IGW_04604 [Bacillus cereus ISP3191]
gi|401198806|gb|EJR05719.1| hypothetical protein II7_05274 [Bacillus cereus MSX-A12]
gi|401203635|gb|EJR10471.1| hypothetical protein II9_05276 [Bacillus cereus MSX-D12]
gi|401238765|gb|EJR45198.1| hypothetical protein IIK_04663 [Bacillus cereus VD102]
gi|401819500|gb|EJT18677.1| Yacp-like protein [Bacillus anthracis str. UR-1]
gi|403392322|gb|EJY89576.1| Yacp-like protein [Bacillus anthracis str. BF1]
Length = 170
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|407474732|ref|YP_006789132.1| hypothetical protein Curi_c22830 [Clostridium acidurici 9a]
gi|407051240|gb|AFS79285.1| protein of unknown function DUF901 [Clostridium acidurici 9a]
Length = 113
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L VDGYN+ W L K L+ AR +LI+ + E+ +VVVVFDA + H
Sbjct: 9 LFVDGYNIINCWNNLR-EISKVSLEEARNELIDVMAEYKGYTGTEVVVVFDAHLVKGSCH 67
Query: 105 KEEFI-GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQ 150
K+E I G+++V+ E AD +IEK++ + + V V TSD ++Q
Sbjct: 68 KKETIKGIEVVYTKENETADHYIEKKLDIMGK--TKSVKVATSDWIEQ 113
>gi|350269066|ref|YP_004880374.1| putative small GTP-binding protein [Oscillibacter valericigenes
Sjm18-20]
gi|348593908|dbj|BAK97868.1| putative small GTP-binding protein [Oscillibacter valericigenes
Sjm18-20]
Length = 876
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV W +L+ RLD AR+ L + + ++ R+ +V+VVFDA + G
Sbjct: 716 LLVDGYNVIFAWDELKT-VAAERLDAARRALCDLMSDYQGFRKCEVIVVFDAYKVKGGIE 774
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E++ + +V+ E ADA+IE+ + + +V VV+SD +Q G GA S
Sbjct: 775 KVEKYHNIHVVYTKEAETADAYIERTTYQIGRE--HRVRVVSSDGAEQVIILGHGALRVS 832
Query: 163 SKALVSEV 170
+ E+
Sbjct: 833 AAGFHDEM 840
>gi|402311023|ref|ZP_10829978.1| YacP-like NYN domain protein [Eubacterium sp. AS15]
gi|400366145|gb|EJP19181.1| YacP-like NYN domain protein [Eubacterium sp. AS15]
Length = 176
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGL 101
+L++DGYNV W L+ + +L++AR+ L + E++ ++V+DA +
Sbjct: 6 KILIIDGYNVINAWEDLK-RLAEEKLELARESLNAMISEYTQYSGFSTIIVYDAYRVRNS 64
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ +E+ ++I++ E AD +IE+ I L + V T D +QH G G
Sbjct: 65 ESRQEKIKNLEIIYTKENETADTYIERFITDLGPKKFLDITVATDDISEQHIVAGKGGNR 124
Query: 161 WSSKALVSEV 170
S++ L +V
Sbjct: 125 ISTRQLYIDV 134
>gi|329116198|ref|ZP_08244915.1| hypothetical protein SPB_1711 [Streptococcus parauberis NCFD 2020]
gi|326906603|gb|EGE53517.1| hypothetical protein SPB_1711 [Streptococcus parauberis NCFD 2020]
Length = 172
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 10/135 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
++LVDGYN+ +W + + F +LD AR + +L ++ ++++V VFDA + G+
Sbjct: 5 IMLVDGYNMIAFWQETKQLFKTNQLDQARTIFLNKLNNYAHFEKIEIVCVFDAQFVPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
++++ + +VF E AD++IE+ E+ +R V V TSD +Q + GA
Sbjct: 65 QRYDQYM-ISVVFTEEDETADSYIERTAAELNTVRN----LVEVATSDLNEQWTIFSQGA 119
Query: 159 FVWSSKALVSEVSLI 173
++ L V+ +
Sbjct: 120 LRVPARELERRVNTV 134
>gi|384177998|ref|YP_005563760.1| hypothetical protein YBT020_00445 [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324324082|gb|ADY19342.1| hypothetical protein YBT020_00445 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 170
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|295091152|emb|CBK77259.1| Predicted RNA-binding protein containing a PIN domain [Clostridium
cf. saccharolyticum K10]
Length = 177
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L+ + +D AR KL + L + ++ V++VFD + G P
Sbjct: 6 LLVDGYNIIFAWTDLKK-IAEQNIDSARTKLQDILCNYQGFKKCNVILVFDGYKVKGNPG 64
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFVW 161
++ + ++F E AD +IEK +E G V V TSD L+Q G GA
Sbjct: 65 SVIKYHNIHVIFTKEAETADQYIEK---VTQEIGRQYHVRVATSDRLEQVIILGKGAVRM 121
Query: 162 SSKALVSEV 170
S++ L E+
Sbjct: 122 SARDLEKEI 130
>gi|229067858|ref|ZP_04201175.1| hypothetical protein bcere0025_820 [Bacillus cereus F65185]
gi|229077388|ref|ZP_04210048.1| hypothetical protein bcere0023_1030 [Bacillus cereus Rock4-2]
gi|229148502|ref|ZP_04276758.1| hypothetical protein bcere0011_800 [Bacillus cereus m1550]
gi|423416007|ref|ZP_17393127.1| hypothetical protein IE1_05311 [Bacillus cereus BAG3O-2]
gi|423428199|ref|ZP_17405203.1| hypothetical protein IE7_00015 [Bacillus cereus BAG4O-1]
gi|423439452|ref|ZP_17416390.1| hypothetical protein IE9_05590 [Bacillus cereus BAG4X12-1]
gi|228634918|gb|EEK91491.1| hypothetical protein bcere0011_800 [Bacillus cereus m1550]
gi|228705922|gb|EEL58248.1| hypothetical protein bcere0023_1030 [Bacillus cereus Rock4-2]
gi|228715217|gb|EEL67076.1| hypothetical protein bcere0025_820 [Bacillus cereus F65185]
gi|401094454|gb|EJQ02535.1| hypothetical protein IE1_05311 [Bacillus cereus BAG3O-2]
gi|401112806|gb|EJQ20680.1| hypothetical protein IE9_05590 [Bacillus cereus BAG4X12-1]
gi|401127121|gb|EJQ34850.1| hypothetical protein IE7_00015 [Bacillus cereus BAG4O-1]
Length = 170
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|291549076|emb|CBL25338.1| small GTP-binding protein domain [Ruminococcus torques L2-14]
Length = 923
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L+ + + AR KL + L + R+ +++V+DA + G P
Sbjct: 755 LLVDGYNIIFSWEELKE-LSERDIGAARGKLADILSNYQGFRKCTLILVYDAYKVEGNPG 813
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + IV+ E AD +IEK + + ++ V V TSD L+Q G GA S
Sbjct: 814 EVMKYHNIYIVYTKEAETADQYIEKTVRRIAKNA--DVTVATSDGLEQVIIMGQGAHRMS 871
Query: 163 SKALVSEVSLII 174
+ L EV L +
Sbjct: 872 APGLKEEVELAL 883
>gi|118475863|ref|YP_893014.1| hypothetical protein BALH_0092 [Bacillus thuringiensis str. Al
Hakam]
gi|196047746|ref|ZP_03114945.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225862145|ref|YP_002747523.1| hypothetical protein BCA_0121 [Bacillus cereus 03BB102]
gi|229182487|ref|ZP_04309738.1| hypothetical protein bcere0004_800 [Bacillus cereus BGSC 6E1]
gi|376264120|ref|YP_005116832.1| hypothetical protein bcf_00585 [Bacillus cereus F837/76]
gi|118415088|gb|ABK83507.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|196021424|gb|EDX60132.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|225785715|gb|ACO25932.1| conserved hypothetical protein [Bacillus cereus 03BB102]
gi|228600942|gb|EEK58511.1| hypothetical protein bcere0004_800 [Bacillus cereus BGSC 6E1]
gi|364509920|gb|AEW53319.1| Hypothetical protein bcf_00585 [Bacillus cereus F837/76]
Length = 170
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLKK-LRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVHGI 61
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKKQTADEKIEQLAIELR-NINTQIYVATSDYTEQWVIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|238917338|ref|YP_002930855.1| elongation factor EF-G [Eubacterium eligens ATCC 27750]
gi|238872698|gb|ACR72408.1| elongation factor EF-G [Eubacterium eligens ATCC 27750]
Length = 875
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 11/134 (8%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ + +L + + LD AR +L++ L + ++ +++ VFDA +P H
Sbjct: 735 LLVDGYNIIHAFKEL-SELAQVNLDSARGRLLDILCNYQAMKGCELIAVFDAYR--VPGH 791
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAF 159
EEFI + +VF AD +IEK E+G V V TSD ++Q G G
Sbjct: 792 DEEFIDFHNIHVVFTKTAETADHYIEK---FAHENGKKYNVTVATSDGVEQVIIRGQGCL 848
Query: 160 VWSSKALVSEVSLI 173
+ S++ E++ +
Sbjct: 849 LISAREFEKEIAAM 862
>gi|313891915|ref|ZP_07825517.1| conserved hypothetical protein [Dialister microaerophilus UPII
345-E]
gi|313119690|gb|EFR42880.1| conserved hypothetical protein [Dialister microaerophilus UPII
345-E]
Length = 169
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 46 LVDGYNV--CGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
LVDGYNV C + + + L+ R+ LI+ L +F ++++++VFD + L
Sbjct: 6 LVDGYNVIFC-----MSDKYPTHDLETGRKMLIDALQDFGAHNDIEIIIVFDGQGTSLKI 60
Query: 104 HKEEFIG-VDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+E IVF P AD++IE+E R D ++VVTSD +Q+ G G++
Sbjct: 61 REETLSEYFHIVFTPARMTADSYIERESYK-RRDEYRSIFVVTSDGPEQNQVLGHGSY 117
>gi|416127886|ref|ZP_11597151.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
gi|319399719|gb|EFV87968.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
Length = 163
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 65 KGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPTHKEEFI-GVDIVFPGET-CA 121
K L+ AR++L++ + ++ + ++V VFDA SG+ +E F GV +F E A
Sbjct: 13 KENLEEAREQLLDTIANYNALIADEIVCVFDAYEQSGIE--REYFYHGVKTIFTKEKETA 70
Query: 122 DAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKAL 166
D++IE+ + L + VVTSD +QHA +G+GA+ SS+ +
Sbjct: 71 DSFIERYVYELYNKHTTHITVVTSDMSEQHAIFGSGAYRISSREM 115
>gi|329121965|ref|ZP_08250577.1| hypothetical protein HMPREF9083_1039 [Dialister micraerophilus DSM
19965]
gi|327467263|gb|EGF12766.1| hypothetical protein HMPREF9083_1039 [Dialister micraerophilus DSM
19965]
Length = 169
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 46 LVDGYNV--CGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
LVDGYNV C + + + L+ R+ LI+ L +F ++++++VFD + L
Sbjct: 6 LVDGYNVIFC-----MSDQYPTHDLETGRKMLIDALQDFGAHNDIEIIIVFDGQGTSLKI 60
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+E E+ + + P AD++IE+E R D ++VVTSD +Q+ G G++
Sbjct: 61 REETLSEYFHI-LFTPARMTADSYIERESYK-RRDEYRSIFVVTSDGPEQNQVLGHGSY 117
>gi|306821096|ref|ZP_07454712.1| conserved hypothetical protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550789|gb|EFM38764.1| conserved hypothetical protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 176
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGL 101
+L++DGYNV W L+ + +L++AR+ L + E++ ++V+DA +
Sbjct: 6 KILIIDGYNVINAWEDLK-KLAEEKLELARESLNAMISEYTQYSGFSTIIVYDAYRVRNS 64
Query: 102 PTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ +E+ ++I++ E AD +IE+ I L + V T D +QH G G
Sbjct: 65 ESRQEKIKNLEIIYTKENETADTYIERFITDLGPKKFLDITVATDDISEQHIVAGKGGNR 124
Query: 161 WSSKALVSEV 170
S++ L +V
Sbjct: 125 ISTRQLYIDV 134
>gi|229009602|ref|ZP_04166828.1| hypothetical protein bmyco0001_780 [Bacillus mycoides DSM 2048]
gi|423602378|ref|ZP_17578378.1| hypothetical protein III_05180 [Bacillus cereus VD078]
gi|423665394|ref|ZP_17640533.1| hypothetical protein IKM_05810 [Bacillus cereus VDM022]
gi|228751624|gb|EEM01424.1| hypothetical protein bmyco0001_780 [Bacillus mycoides DSM 2048]
gi|401225917|gb|EJR32461.1| hypothetical protein III_05180 [Bacillus cereus VD078]
gi|401290301|gb|EJR95996.1| hypothetical protein IKM_05810 [Bacillus cereus VDM022]
Length = 170
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVYGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NVNTQIYVATSDYTEQWIIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|440785443|ref|ZP_20962200.1| hypothetical protein F502_18798 [Clostridium pasteurianum DSM 525]
gi|440218339|gb|ELP57561.1| hypothetical protein F502_18798 [Clostridium pasteurianum DSM 525]
Length = 171
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
+ +DGYNV W +L G ++ +R KL + L+ + + ++ +VFDA +
Sbjct: 4 IFIDGYNVINSWKELRQENT-GSMENSRMKLKDILLNYGVYNGYRIFLVFDAHLQAGSIE 62
Query: 105 KEEFIGVDIVF----PGETCADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAF 159
K E + +++ GET AD++IE+ + + G +V VVTSD L+Q + GA
Sbjct: 63 KREKVNNNLIIVFTKEGET-ADSFIERYVNNI---GRKYEVLVVTSDSLEQQLIFQRGAV 118
Query: 160 VWSSKALVSEVSLI 173
SS E+ I
Sbjct: 119 RMSSLEFYHEIKSI 132
>gi|297587635|ref|ZP_06946279.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
gi|297574324|gb|EFH93044.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
Length = 177
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LM 98
N L VDGYN+ WP L LD AR++LI+ + E+ + +V VVFDA L+
Sbjct: 3 NKQIYLYVDGYNIINAWPNLYKLSNDVDLDSAREELIDIMKEYQNLSGEQVYVVFDAYLV 62
Query: 99 SGLPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
G + +E+ + +V+ E AD +IE+++ +++ K++V ++D + Q G
Sbjct: 63 KGGMSIEEKRDNLTVVYTKEHESADRYIERKVNDMKK--HDKMYVASNDGMIQRIILSRG 120
Query: 158 AFVWSSKAL 166
S+ L
Sbjct: 121 GIRISANEL 129
>gi|261366322|ref|ZP_05979205.1| elongation factor G [Subdoligranulum variabile DSM 15176]
gi|282571923|gb|EFB77458.1| GTP-binding domain protein [Subdoligranulum variabile DSM 15176]
Length = 869
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV W L + LD AR++L++ L ++ + ++VFDA + G
Sbjct: 732 LLVDGYNVIFAWDDLR-RIAESNLDAARRRLMDILCNYAGYKRCVPILVFDAYKVRGGVR 790
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
E+F + +V+ E AD +IE+ L ++ + VV+SD +Q G GA S
Sbjct: 791 EVEKFHNLYVVYTQEAETADMYIERATHELAKE--RRTRVVSSDGAEQVIVLGHGALRVS 848
Query: 163 SKALVSEVSLI 173
++A EV+ +
Sbjct: 849 ARAFAEEVAAV 859
>gi|302381114|ref|ZP_07269574.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
gi|303235309|ref|ZP_07321927.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
gi|302311161|gb|EFK93182.1| conserved hypothetical protein [Finegoldia magna ACS-171-V-Col3]
gi|302493623|gb|EFL53411.1| conserved hypothetical protein [Finegoldia magna BVS033A4]
Length = 177
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LM 98
N L VDGYN+ WP L LD AR++LI+ + E+ + +V VVFDA L+
Sbjct: 3 NKQIYLYVDGYNIINAWPNLYKLSNDVDLDSAREELIDIMKEYQNLSGEQVYVVFDAYLV 62
Query: 99 SGLPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
G + +E+ + +V+ E AD +IE+++ +++ K++V ++D + Q G
Sbjct: 63 KGGMSIEEKRDNLTVVYTKEHESADRYIERKVNDMKK--HDKMYVASNDGMIQRIILSRG 120
Query: 158 AFVWSSKAL 166
S+ L
Sbjct: 121 GIRISANEL 129
>gi|310829597|ref|YP_003961954.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308741331|gb|ADO38991.1| protein of unknown function DUF901 [Eubacterium limosum KIST612]
Length = 176
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L+VDGYNV + ++E L+ AR+ LIE+L +S + + V+VFDA
Sbjct: 8 LIVDGYNVIHHLAEMEG-LTDFNLEEAREDLIEQLNSYSGLMGYETVLVFDAYSQENAER 66
Query: 105 KEEFIG-VDIVFPGET-CADAWIEKEIVALREDGCPK---VWVVTSDHLQQHAAYGAGAF 159
+EE G + +VF + AD +IEK + +L P+ V VVTSD+ Q G
Sbjct: 67 REEIRGRIKVVFTEKNKTADTYIEKLVFSL-----PRPYTVKVVTSDYTLQRVVLANGGE 121
Query: 160 VWSSKALVSEVS 171
S+ L+ ++
Sbjct: 122 RVPSRELIQAMA 133
>gi|333905713|ref|YP_004479584.1| hypothetical protein STP_1464 [Streptococcus parauberis KCTC 11537]
gi|333120978|gb|AEF25912.1| hypothetical protein STP_1464 [Streptococcus parauberis KCTC 11537]
Length = 170
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 10/135 (7%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLP 102
++LVDGYN+ +W + + F +LD AR + +L ++ ++++V VFDA + G+
Sbjct: 5 IMLVDGYNMIAFWQETKQLFKTNQLDQARTIFLNKLNNYAHFEKIEIVCVFDAQFVPGVR 64
Query: 103 THKEEFIGVDIVFPGET-CADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
++++ + +VF E AD++IE+ E+ +R V V TSD +Q + GA
Sbjct: 65 QRYDQYM-ISVVFTEEDETADSYIERTAAELNTVRN----LVEVATSDLNEQWTIFSQGA 119
Query: 159 FVWSSKALVSEVSLI 173
++ L V+ +
Sbjct: 120 LRVPARELERRVNTV 134
>gi|336440071|ref|ZP_08619670.1| hypothetical protein HMPREF0990_02064 [Lachnospiraceae bacterium
1_1_57FAA]
gi|336014420|gb|EGN44269.1| hypothetical protein HMPREF0990_02064 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 173
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
+LVDGYN+ W L+ K L AR KL + L + ++ ++++VFDA + G P
Sbjct: 1 MLVDGYNIIFAWDSLKE-LAKIDLAAARGKLADILCNYQGYKQCELILVFDAYKVEGNPG 59
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IEK + + ++ V V TSD L+Q G GA S
Sbjct: 60 EIMKYHNIHVVYTREAETADHYIEKTVRRIAKE--HDVIVATSDALEQVIIMGQGAHRMS 117
Query: 163 SKALVSEVSLII 174
+ L E+ +I
Sbjct: 118 AAGLKEEIESVI 129
>gi|373451402|ref|ZP_09543326.1| small GTP-binding protein domain protein [Eubacterium sp. 3_1_31]
gi|371968537|gb|EHO85993.1| small GTP-binding protein domain protein [Eubacterium sp. 3_1_31]
Length = 864
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL---MSGL 101
LLVDGYN+ W +L K ++D AR +LI++L + R+ +V++VFDA S
Sbjct: 705 LLVDGYNIIYDWDELRA-LAKDQMDAARDRLIDKLNNYQGYRKCEVILVFDAYRVKQSAQ 763
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K I V +T AD +IE L ++ +V V TSD L+Q G GA
Sbjct: 764 TIRKHGNIHVVYTKTSQT-ADNYIEMATHKLAKE--YRVRVATSDGLEQLIVIGQGAQRI 820
Query: 162 SSKALVSEV 170
S++ EV
Sbjct: 821 SAREFQKEV 829
>gi|293402118|ref|ZP_06646257.1| putative tetracycline resistance protein TetP [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304510|gb|EFE45760.1| putative tetracycline resistance protein TetP [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 864
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL---MSGL 101
LLVDGYN+ W +L K ++D AR +LI++L + R+ +V++VFDA S
Sbjct: 705 LLVDGYNIIYDWDELRA-LAKDQMDAARDRLIDKLNNYQGYRKCEVILVFDAYRVKQSAQ 763
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K I V +T AD +IE L ++ +V V TSD L+Q G GA
Sbjct: 764 TIRKHGNIHVVYTKTSQT-ADNYIEMATHKLAKE--YRVRVATSDGLEQLIVIGQGAQRI 820
Query: 162 SSKALVSEV 170
S++ EV
Sbjct: 821 SAREFQKEV 829
>gi|366089459|ref|ZP_09455932.1| hypothetical protein LaciK1_05137 [Lactobacillus acidipiscis KCTC
13900]
Length = 173
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VD YN+ G WPKL +L+ AR +L+ L ++ +++VVFDA+ + GL
Sbjct: 5 ILIVDAYNMIGNWPKLNKLKKNDQLEEARDQLLRVLSDYHKQSGYQIIVVFDAMYVPGLS 64
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+++ + +++ E AD++IE + + +V V TSD +Q + GA
Sbjct: 65 KRYKQYT-LQVIWTDEGQTADSYIE-SLAGQLMNPLTQVTVATSDQAEQWTIFSQGAL 120
>gi|163938100|ref|YP_001642984.1| hypothetical protein BcerKBAB4_0087 [Bacillus weihenstephanensis
KBAB4]
gi|229053939|ref|ZP_04195373.1| hypothetical protein bcere0026_790 [Bacillus cereus AH603]
gi|229131100|ref|ZP_04260012.1| hypothetical protein bcere0014_780 [Bacillus cereus BDRD-ST196]
gi|229165081|ref|ZP_04292876.1| hypothetical protein bcere0007_780 [Bacillus cereus AH621]
gi|423370675|ref|ZP_17348080.1| hypothetical protein IC3_05749 [Bacillus cereus VD142]
gi|423485392|ref|ZP_17462074.1| hypothetical protein IEU_00015 [Bacillus cereus BtB2-4]
gi|423491117|ref|ZP_17467761.1| hypothetical protein IEW_00015 [Bacillus cereus CER057]
gi|423502087|ref|ZP_17478704.1| hypothetical protein IEY_05314 [Bacillus cereus CER074]
gi|423514643|ref|ZP_17491150.1| hypothetical protein IG3_06116 [Bacillus cereus HuA2-1]
gi|423514945|ref|ZP_17491426.1| hypothetical protein IG7_00015 [Bacillus cereus HuA2-4]
gi|423556911|ref|ZP_17533214.1| hypothetical protein II3_02116 [Bacillus cereus MC67]
gi|423596982|ref|ZP_17572992.1| hypothetical protein IIG_05829 [Bacillus cereus VD048]
gi|423671542|ref|ZP_17646546.1| hypothetical protein IKO_04820 [Bacillus cereus VDM034]
gi|423672654|ref|ZP_17647593.1| hypothetical protein IKS_00197 [Bacillus cereus VDM062]
gi|163860297|gb|ABY41356.1| protein of unknown function DUF901 [Bacillus weihenstephanensis
KBAB4]
gi|228618344|gb|EEK75374.1| hypothetical protein bcere0007_780 [Bacillus cereus AH621]
gi|228652313|gb|EEL08238.1| hypothetical protein bcere0014_780 [Bacillus cereus BDRD-ST196]
gi|228721357|gb|EEL72878.1| hypothetical protein bcere0026_790 [Bacillus cereus AH603]
gi|401073411|gb|EJP81833.1| hypothetical protein IC3_05749 [Bacillus cereus VD142]
gi|401151481|gb|EJQ58932.1| hypothetical protein IEY_05314 [Bacillus cereus CER074]
gi|401162042|gb|EJQ69401.1| hypothetical protein IEW_00015 [Bacillus cereus CER057]
gi|401168446|gb|EJQ75709.1| hypothetical protein IG7_00015 [Bacillus cereus HuA2-4]
gi|401194226|gb|EJR01218.1| hypothetical protein II3_02116 [Bacillus cereus MC67]
gi|401218159|gb|EJR24843.1| hypothetical protein IIG_05829 [Bacillus cereus VD048]
gi|401291931|gb|EJR97596.1| hypothetical protein IKO_04820 [Bacillus cereus VDM034]
gi|401311514|gb|EJS16809.1| hypothetical protein IKS_00197 [Bacillus cereus VDM062]
gi|402441583|gb|EJV73533.1| hypothetical protein IEU_00015 [Bacillus cereus BtB2-4]
gi|402442043|gb|EJV73987.1| hypothetical protein IG3_06116 [Bacillus cereus HuA2-1]
Length = 170
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVYGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWIIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|225568838|ref|ZP_03777863.1| hypothetical protein CLOHYLEM_04917 [Clostridium hylemonae DSM
15053]
gi|225162337|gb|EEG74956.1| hypothetical protein CLOHYLEM_04917 [Clostridium hylemonae DSM
15053]
Length = 898
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL- 97
+ A LLVDGYN+ W +L+ K + AR KL++ + + R + +++VFDA
Sbjct: 723 EQAEEYLLVDGYNIIFAWDELKE-LAKVNIMSARDKLMDIMSNYQGFRRMTLILVFDAYK 781
Query: 98 MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGA 156
+ G P + + +V+ E AD +IEK + + V V TSD L+Q G
Sbjct: 782 VEGNPGSVSTYHNIYVVYTKEAETADQYIEKTVHEIGRK--HNVTVATSDALEQVIILGQ 839
Query: 157 GAFVWSSKALVSEVSLII 174
G S++ L EV L +
Sbjct: 840 GGRRLSAEGLREEVELAM 857
>gi|331086421|ref|ZP_08335501.1| hypothetical protein HMPREF0987_01804 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406187|gb|EGG85710.1| hypothetical protein HMPREF0987_01804 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 912
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL- 97
D LLVDGYNV W L+ K ++ AR KL++ L + R+ +++VFDA
Sbjct: 732 DQMEEYLLVDGYNVIFAWEDLKE-LAKVNIEGARNKLMDVLCNYQGFRKCNLILVFDAYK 790
Query: 98 MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYG 155
+ G +++ + +V+ E AD +IEK + E G V V TSD+++Q G
Sbjct: 791 VQGQELGVQKYHNIYVVYTKEAETADQYIEK---VVHEIGRKYHVTVATSDNVEQVVTLG 847
Query: 156 AGAFVWSSKALVSEV 170
G + S++ L +EV
Sbjct: 848 QGGKLLSARELRTEV 862
>gi|226322547|ref|ZP_03798065.1| hypothetical protein COPCOM_00319 [Coprococcus comes ATCC 27758]
gi|225209041|gb|EEG91395.1| putative translation elongation factor G [Coprococcus comes ATCC
27758]
Length = 927
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV W L+ K ++ AR KL++ L + + +++VFDA + G
Sbjct: 752 LLVDGYNVIFAWEDLKE-LAKENIEAARNKLMDVLCNYQGFKNYPLILVFDAYKVEGEAM 810
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFVW 161
++ + +V+ E AD +IEK + E G V VVTSD ++Q G G +
Sbjct: 811 EIFKYHNIHVVYTKEAETADMYIEK---VVHEVGRKYHVTVVTSDGVEQVITQGQGGTII 867
Query: 162 SSKALVSEVSLI 173
SS+ + EV ++
Sbjct: 868 SSREFLEEVKIV 879
>gi|223984741|ref|ZP_03634854.1| hypothetical protein HOLDEFILI_02150 [Holdemania filiformis DSM
12042]
gi|223963292|gb|EEF67691.1| hypothetical protein HOLDEFILI_02150 [Holdemania filiformis DSM
12042]
Length = 905
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 10 RKKVEKEELPEDTELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLENHFIKGRLD 69
R V++ E+PE E+ R LLVDGYN+ W +L + L
Sbjct: 722 RAPVKRTEIPEHIEIQR-----------QKPKTKCLLVDGYNMIHSWSELVP-LAQEDLS 769
Query: 70 VARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPTHKEEFIGVDIVFPGET-CADAWIEK 127
AR +LI+ L F R +++VFDA + P ++ + +V+ + AD++IEK
Sbjct: 770 AARDQLIQLLSSFQGTRTGILILVFDAYQVKDNPGSIQKLHNLYVVYTKTSQTADSYIEK 829
Query: 128 EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEVS 171
L ++ +V V TSD ++Q G GA SS+ L ++V
Sbjct: 830 ATHQLADEF--EVTVATSDGMEQLIIMGQGAMRLSSRELEAQVQ 871
>gi|423480237|ref|ZP_17456927.1| hypothetical protein IEQ_00015 [Bacillus cereus BAG6X1-2]
gi|401149242|gb|EJQ56717.1| hypothetical protein IEQ_00015 [Bacillus cereus BAG6X1-2]
Length = 170
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVYGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWIIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|257067129|ref|YP_003153385.1| hypothetical protein Apre_1643 [Anaerococcus prevotii DSM 20548]
gi|256799009|gb|ACV29664.1| protein of unknown function DUF901 [Anaerococcus prevotii DSM
20548]
Length = 177
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVA--RQKLIEELVEFSMIREVKVVVVFDALMSGL 101
+ +DGYNV W +L+ R+D+A R KLIEE+ E+ + ++V+VFDA L
Sbjct: 8 ITFIDGYNVINKWGELKEI---SRIDLADARDKLIEEMAEYKSLSGEELVIVFDAY--NL 62
Query: 102 PTHKEEFI---GVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
KE I G+ IVF AD +IE+E+ R + + VVT D Q G
Sbjct: 63 DRVKETVIEKYGMKIVFTKRFQTADTYIERELA--RANRHHNIKVVTDDGAIQTQVTSKG 120
Query: 158 A 158
A
Sbjct: 121 A 121
>gi|219120469|ref|XP_002180972.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407688|gb|EEC47624.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 354
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 6 TSYRRKKVEKEELPEDTELYR-----FFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLE 60
T+YRR E+E + + E R + I N + P+++VDGYNV W +L+
Sbjct: 76 TAYRRSWDEEEIVQKAEERRRKGQDPNWDVILNRT----STAPLVIVDGYNVIYKWSRLK 131
Query: 61 NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM-------------SGLPTHKEE 107
H +KG ARQ L ++L ++ ++ VFD S PT ++
Sbjct: 132 KHMVKGDPQKARQLLTDDLENLRSLKGWRIECVFDGTRRSTVGPLGHGPGNSNTPTGMDK 191
Query: 108 FI-------GVDIVFPGETC-ADAWIEKEIVALRE----DGCPKVWVVTSDHLQQHAAYG 155
GV +VF G AD++IE + + V T D + + A
Sbjct: 192 ITRASVSKHGVRVVFTGVGIEADSYIESRCARAKNLTHGELTGSFIVATDDAMIRLAGQN 251
Query: 156 AGAFVWSSKALVSEVSLI 173
AGA S+ VSE+ +
Sbjct: 252 AGALCMSTDRFVSELKAV 269
>gi|295093893|emb|CBK82984.1| small GTP-binding protein domain [Coprococcus sp. ART55/1]
Length = 897
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS 99
N ++VDGYNV W L + +D AR KL++ L + K++VVFD
Sbjct: 753 NGEDYVIVDGYNVIFAWDTLR-ELSEHNIDSARGKLMDILSNYQGYMNCKLIVVFDGYK- 810
Query: 100 GLPTHKEE---FIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAY 154
+ +K E + +++V+ GET ADA IEK L KV VVTSD L+Q
Sbjct: 811 -VKDNKGERFPYDDIEVVYTKEGET-ADAHIEKLTHELARK--HKVTVVTSDGLEQIVTM 866
Query: 155 GAGAFVWSSKALVSEVSLI 173
G GA SS+ +EV +
Sbjct: 867 GQGAIRMSSRDFKAEVERV 885
>gi|255505749|ref|ZP_05347954.3| tetracycline resistance protein [Bryantella formatexigens DSM
14469]
gi|255266047|gb|EET59252.1| putative translation elongation factor G [Marvinbryantia
formatexigens DSM 14469]
Length = 912
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L + ++ AR +L + L + R+ V++VFDA + G
Sbjct: 734 LLVDGYNIIFAWEEL-RELARINIESARGRLADILCNYQGFRKNTVILVFDAYRVEGGTG 792
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAFV 160
+++ + +V+ E AD +IEK + + P+ V V TSD L+Q +GAGA
Sbjct: 793 SVQKYHNIYVVYTREAETADQYIEKTVHKI----SPQHHVTVATSDALEQMIIWGAGASR 848
Query: 161 WSSKALVSEV 170
S+ L+ E+
Sbjct: 849 LSAAGLLEEI 858
>gi|169824089|ref|YP_001691700.1| hypothetical protein FMG_0392 [Finegoldia magna ATCC 29328]
gi|167830894|dbj|BAG07810.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
Length = 177
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LM 98
N L VDGYN+ WP L LD AR++LI+ + E+ + +V VVFDA L+
Sbjct: 3 NKQIYLYVDGYNIINAWPNLYKLSNDVDLDSAREELIDIMKEYQNLSGEQVYVVFDAYLV 62
Query: 99 SGLPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
G + +E+ + +++ E AD +IE+++ +++ K++V ++D + Q G
Sbjct: 63 KGGMSIEEKRDNLTVIYTKEHESADRYIERKVNDMKK--HDKMYVASNDGMIQRIILSRG 120
Query: 158 AFVWSSKAL 166
S+ L
Sbjct: 121 GIRISANEL 129
>gi|423456286|ref|ZP_17433139.1| hypothetical protein IEE_05030 [Bacillus cereus BAG5X1-1]
gi|423473118|ref|ZP_17449860.1| hypothetical protein IEM_04422 [Bacillus cereus BAG6O-2]
gi|401130885|gb|EJQ38540.1| hypothetical protein IEE_05030 [Bacillus cereus BAG5X1-1]
gi|402426616|gb|EJV58737.1| hypothetical protein IEM_04422 [Bacillus cereus BAG6O-2]
Length = 170
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ ++ KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMADYQGYTGTKVMIVFDAYTVYGI 61
Query: 103 THKEEFIGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKKQTADEKIEQLAIELR-NINTQIYVATSDYTEQWIIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|346307750|ref|ZP_08849880.1| hypothetical protein HMPREF9457_01589 [Dorea formicigenerans
4_6_53AFAA]
gi|345904708|gb|EGX74452.1| hypothetical protein HMPREF9457_01589 [Dorea formicigenerans
4_6_53AFAA]
Length = 925
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV W +L+ K ++ AR KL++ L + ++ V++VFDA + G
Sbjct: 757 LLVDGYNVIFAWDELKE-LAKVNIESARNKLMDILSNYQGFKKCTVILVFDAYKVDGDTL 815
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ + +V+ + AD +IEK + + V VVTSD ++Q G G+ + S
Sbjct: 816 EIQKYHNIHVVYTKQAETADQYIEKVVHHIGRK--RHVTVVTSDGVEQVVTQGQGSALIS 873
Query: 163 SKALVSEVSL 172
S+ EV +
Sbjct: 874 SREFYEEVEI 883
>gi|417925621|ref|ZP_12569040.1| hypothetical protein HMPREF9489_1248 [Finegoldia magna
SY403409CC001050417]
gi|341591247|gb|EGS34455.1| hypothetical protein HMPREF9489_1248 [Finegoldia magna
SY403409CC001050417]
Length = 186
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 38 IDNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA- 96
+ N L VDGYN+ WP L LD AR++LI+ + E+ + +V VVFDA
Sbjct: 1 MKNKQIYLYVDGYNIINAWPNLYKLSNDVDLDSAREELIDIMKEYQNLSGEQVYVVFDAY 60
Query: 97 LMSGLPTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYG 155
L+ G + +E+ + +++ E AD +IE+++ +++ K++V ++D + Q
Sbjct: 61 LVKGGMSIEEKRDNLTVIYTKEHESADRYIERKVNDMKK--HDKMYVASNDGMIQRIILS 118
Query: 156 AGAFVWSSKAL 166
G S+ L
Sbjct: 119 RGGIRISANEL 129
>gi|423526405|ref|ZP_17502854.1| hypothetical protein IGC_05764 [Bacillus cereus HuA4-10]
gi|401163455|gb|EJQ70801.1| hypothetical protein IGC_05764 [Bacillus cereus HuA4-10]
Length = 170
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYN+ G W L+ L +R LI+++ + KV++VFDA
Sbjct: 3 DILIVDGYNIIGAWGDLK-KLRDVDLQSSRDALIDKMANYQGYTGTKVMIVFDAYTVYGI 61
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
K + V+++F + AD IE+ + LR + +++V TSD+ +Q + GA
Sbjct: 62 EKKMKQSRVEVIFTRKNQTADEKIEQLAIELR-NINTQIYVATSDYTEQWIIFAQGALRK 120
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 121 SARELELEVQ 130
>gi|427392828|ref|ZP_18886731.1| hypothetical protein HMPREF9698_00537 [Alloiococcus otitis ATCC
51267]
gi|425731116|gb|EKU93941.1| hypothetical protein HMPREF9698_00537 [Alloiococcus otitis ATCC
51267]
Length = 180
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L VDGYN+ G WP L + R+ AR L++ L ++ +K+ +VFDA T
Sbjct: 5 ILYVDGYNMIGAWPNLVPLQRQNRIGDARDLLLDILSNYAKYTGMKIKLVFDAQFVPGIT 64
Query: 104 HKEEFIGVDIVFPGE-TCADAWIEKEIVALREDG--CPKVWVVTSDHLQQHAAYGAGAFV 160
+ + V++VF E AD++IEK A+ E+ V+V TSD +Q + GA
Sbjct: 65 KRYDQYEVEVVFTREDQTADSYIEK---AVGEENYLLSNVFVATSDLAEQWIVFQRGAVR 121
Query: 161 WSSKALVSEVS 171
S+ L ++
Sbjct: 122 KSANELWKDIK 132
>gi|406659005|ref|ZP_11067145.1| hypothetical protein A0G_1169 [Streptococcus iniae 9117]
gi|405579220|gb|EKB53334.1| hypothetical protein A0G_1169 [Streptococcus iniae 9117]
Length = 164
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPTH 104
+VDGYN+ +W + F +LD AR+ L+ +L ++ + ++ VFDA + G+
Sbjct: 1 MVDGYNMIAFWQETRQLFKSNQLDQAREVLLTKLNNYAHFAKTEITCVFDAQFVPGVRQR 60
Query: 105 KEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSK 164
+ ++ I E ADA+IE+ L V V TSD +Q + GA ++
Sbjct: 61 YDHYMVTVIFTEEEETADAYIERMATELNT-TLNLVEVATSDLNEQWTIFAQGALRVPAR 119
Query: 165 ALVSEVSLI 173
L V+ +
Sbjct: 120 ELERRVNTV 128
>gi|166031565|ref|ZP_02234394.1| hypothetical protein DORFOR_01265 [Dorea formicigenerans ATCC
27755]
gi|166028542|gb|EDR47299.1| putative translation elongation factor G [Dorea formicigenerans
ATCC 27755]
Length = 925
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV W +L+ K ++ AR KL++ L + ++ V++VFDA + G
Sbjct: 757 LLVDGYNVIFAWDELKE-LAKVNIESARNKLMDILSNYQGFKKCTVILVFDAYKVDGDTL 815
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ + +V+ + AD +IEK + + V VVTSD ++Q G G+ + S
Sbjct: 816 EIQKYHNIHVVYTKQAETADQYIEKVVHHIGRK--RHVTVVTSDGVEQVVTQGQGSALIS 873
Query: 163 SKALVSEVSL 172
S+ EV +
Sbjct: 874 SREFYEEVEI 883
>gi|210612667|ref|ZP_03289415.1| hypothetical protein CLONEX_01617 [Clostridium nexile DSM 1787]
gi|210151469|gb|EEA82477.1| hypothetical protein CLONEX_01617 [Clostridium nexile DSM 1787]
Length = 896
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L+ + ++ AR KL++ L + R+ +++VFDA + G
Sbjct: 713 LLVDGYNIIFAWEDLKE-LSEINIEAARMKLMDILSNYQGYRKQTLILVFDAYKVPGNVG 771
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ + +V+ E AD +IEK + + + V V TSD L+Q G GA S
Sbjct: 772 EVQKYHNIHVVYTKEAETADQYIEKTVQEIGKK--YHVTVATSDALEQMIILGQGAQRIS 829
Query: 163 SKALVSEV 170
+K L+ E+
Sbjct: 830 AKGLLEEI 837
>gi|365833392|ref|ZP_09374911.1| small GTP-binding protein domain [Coprobacillus sp. 3_3_56FAA]
gi|365258236|gb|EHM88248.1| small GTP-binding protein domain [Coprobacillus sp. 3_3_56FAA]
Length = 853
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV WP+L+ K LD AR +LI+ + + ++ +++VFDA +
Sbjct: 697 LLVDGYNVIHAWPELK-ELAKDNLDAARMRLIDIMCNYQGYKKCILILVFDAYKVKDNIG 755
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + I + E AD +IE+ L + V TSD L+Q G G S
Sbjct: 756 STTKYHNIYIAYTKEAQTADMYIERATHELASK--YNITVATSDALEQLIVLGQGGKRIS 813
Query: 163 SKALVSEVS 171
S+ L EV+
Sbjct: 814 SRELRLEVA 822
>gi|167756460|ref|ZP_02428587.1| hypothetical protein CLORAM_01993 [Clostridium ramosum DSM 1402]
gi|167703868|gb|EDS18447.1| putative translation elongation factor G [Clostridium ramosum DSM
1402]
Length = 853
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV WP+L+ K LD AR +LI+ + + ++ +++VFDA +
Sbjct: 697 LLVDGYNVIHAWPELK-ELAKDNLDAARMRLIDIMCNYQGYKKCILILVFDAYKVKDNIG 755
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + I + E AD +IE+ L + V TSD L+Q G G S
Sbjct: 756 STTKYHNIYIAYTKEAQTADMYIERATHELASK--YNITVATSDALEQLIVLGQGGKRIS 813
Query: 163 SKALVSEVS 171
S+ L EV+
Sbjct: 814 SRELRLEVA 822
>gi|456370031|gb|EMF48929.1| Hypothetical protein SPJ2_1248 [Streptococcus parauberis KRS-02109]
Length = 165
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 10/134 (7%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPT 103
+LVDGYN+ +W + + F +LD AR + +L ++ ++++V VFDA + G+
Sbjct: 1 MLVDGYNMIAFWQETKQLFKTNQLDQARTIFLNKLNNYAHFEKIEIVCVFDAQFVPGVRQ 60
Query: 104 HKEEFIGVDIVFPGET-CADAWIEK---EIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
++++ + +VF E AD++IE+ E+ +R V V TSD +Q + GA
Sbjct: 61 RYDQYM-ISVVFTEEDETADSYIERTAAELNTVRN----LVEVATSDLNEQWTIFSQGAL 115
Query: 160 VWSSKALVSEVSLI 173
++ L V+ +
Sbjct: 116 RVPARELERRVNTV 129
>gi|373454262|ref|ZP_09546134.1| hypothetical protein HMPREF9453_00303 [Dialister succinatiphilus
YIT 11850]
gi|371935995|gb|EHO63732.1| hypothetical protein HMPREF9453_00303 [Dialister succinatiphilus
YIT 11850]
Length = 169
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
LVDGYNV P + F + L+ R+KL++ + ++ +++V++ FD +
Sbjct: 6 LVDGYNVIFGRPDI---FDRSDLESCRKKLMDIMQDYGAHNDIEVIIAFDGKGNSTKVKV 62
Query: 106 EEFIG-VDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
EE IV+ P AD++IEKE LR + ++VVTSD +Q G GA+
Sbjct: 63 EELSAFFTIVYTPRRMTADSYIEKE-SYLRREEYRHIFVVTSDGPEQSQILGNGAY 117
>gi|237732949|ref|ZP_04563430.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229383939|gb|EEO34030.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 853
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV WP+L+ K LD AR +LI+ + + ++ +++VFDA +
Sbjct: 697 LLVDGYNVIHAWPELK-ELAKDNLDAARMRLIDIMCNYQGYKKCILILVFDAYKVKDNIG 755
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + I + E AD +IE+ L + V TSD L+Q G G S
Sbjct: 756 STTKYHNIYIAYTKEAQTADMYIERATHELASK--YNITVATSDALEQLIVLGQGGKRIS 813
Query: 163 SKALVSEVS 171
S+ L EV+
Sbjct: 814 SRELRLEVA 822
>gi|295110680|emb|CBL24633.1| small GTP-binding protein domain [Ruminococcus obeum A2-162]
Length = 927
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ W +L N K + A KL++ L + R+ +++V DA + H
Sbjct: 760 LLVDGYNIIFSWEEL-NELAKENIHAACDKLMDILSNYQGYRKCTLILVLDAYK--VEGH 816
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+EE I + +V+ E AD +IEK + + +V V TSD L+Q + G GA
Sbjct: 817 REEVIPYHNIYVVYTKEAETADQYIEKTVHKIGRQ--YQVTVATSDGLEQVSIMGQGAHR 874
Query: 161 WSSKALVSEV 170
S++ L E+
Sbjct: 875 ISAQGLKKEI 884
>gi|374625508|ref|ZP_09697924.1| small GTP-binding protein domain protein [Coprobacillus sp.
8_2_54BFAA]
gi|373915168|gb|EHQ46939.1| small GTP-binding protein domain protein [Coprobacillus sp.
8_2_54BFAA]
Length = 853
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV WP+L+ K LD AR +LI+ + + ++ +++VFDA +
Sbjct: 697 LLVDGYNVIHAWPELK-ELAKDNLDAARMRLIDIMCNYQGYKKCILILVFDAYKVKDNIG 755
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + I + E AD +IE+ L + V TSD L+Q G G S
Sbjct: 756 STTKYHNIYIAYTKEAQTADMYIERATHELASK--YNITVATSDALEQLIVLGQGGKRIS 813
Query: 163 SKALVSEVS 171
S+ L EV+
Sbjct: 814 SRELRLEVA 822
>gi|358064830|ref|ZP_09151389.1| hypothetical protein HMPREF9473_03452 [Clostridium hathewayi
WAL-18680]
gi|356696978|gb|EHI58578.1| hypothetical protein HMPREF9473_03452 [Clostridium hathewayi
WAL-18680]
Length = 978
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 32 YNTNQGIDNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVV 91
Y +Q + LLVDGYN+ W +L + +D AR +L++ L + IR ++
Sbjct: 798 YTPSQRETSKEEYLLVDGYNIIFAWEEL-RELAELNIDSARGRLLDILCNYQAIRRCHLI 856
Query: 92 VVFDAL-MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQ 149
VFDA + G T ++ + +V+ E AD +IEK A +V V TSD L+
Sbjct: 857 TVFDAYRVQGHVTECFDYHNIQVVYTKEAETADQYIEK--FAHEHGRNYRVTVATSDRLE 914
Query: 150 QHAAYGAGAFVWSSKAL 166
Q G G + S++ L
Sbjct: 915 QIIIRGQGCLLISAREL 931
>gi|333373151|ref|ZP_08465067.1| tetracycline resistance protein [Desmospora sp. 8437]
gi|332970730|gb|EGK09710.1| tetracycline resistance protein [Desmospora sp. 8437]
Length = 169
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 45 LLVDGYNVCGY---WPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGL 101
L+VDGYNV G W L L+ AR +L L E+ +V +VFDA +
Sbjct: 8 LIVDGYNVIGAHEEWALLP-------LEEARHQLATLLSEYQATSGRRVFLVFDAHRAPG 60
Query: 102 PTHKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ + I + E AD IE+ + R+ G +++V TSD+L+Q +G GA+
Sbjct: 61 AGSRYSEQQITIFYTKEHETADQMIERLVKQHRKPG-RRIYVATSDYLEQRIVFGQGAYR 119
Query: 161 WSSKALVSE 169
SS+ L+ E
Sbjct: 120 LSSRELLEE 128
>gi|403669823|ref|ZP_10934999.1| hypothetical protein KJC8E_13321 [Kurthia sp. JC8E]
Length = 175
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+L+VDGYN+ G W +L+ +L AR +LIE L E+ + + VVFDA + G+
Sbjct: 4 LLIVDGYNMIGDWEELK-QLKDYQLLEARNRLIELLAEYQAYSQYTITVVFDAYQVPGIA 62
Query: 103 THKEEFIGVDIVFPG-ETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGAF 159
T KE+ ++I++ + AD IE + L E + + V TSD +Q+ +G GA
Sbjct: 63 T-KEKQHDIEIIYTKIKETADDCIEALTMDLLEKYGRRTHITVATSDMAEQNIIFGNGAL 121
Query: 160 VWSSKALVSEV 170
++ L + V
Sbjct: 122 RMPARELETAV 132
>gi|197301617|ref|ZP_03166690.1| hypothetical protein RUMLAC_00344 [Ruminococcus lactaris ATCC
29176]
gi|197299347|gb|EDY33874.1| putative translation elongation factor G [Ruminococcus lactaris
ATCC 29176]
Length = 904
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L + + AR KL + L + R+ +++V+DA + G P
Sbjct: 730 LLVDGYNIIFSWEEL-RELSEKDIGAARGKLADILSNYQGYRKCTLILVYDAYKVEGNPG 788
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + IV+ E AD +IEK + + +D V V TSD L+Q G GA S
Sbjct: 789 EVMKYHNIYIVYTKEAETADQYIEKTVRRIAKDAA--VTVATSDGLEQVFILGQGANRMS 846
Query: 163 SKALVSEV 170
+ L E+
Sbjct: 847 APGLKEEI 854
>gi|342733075|ref|YP_004771914.1| hypothetical protein SFBM_1413 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417958884|ref|ZP_12601782.1| hypothetical protein SFB1_013G1 [Candidatus Arthromitus sp. SFB-1]
gi|417965445|ref|ZP_12606970.1| hypothetical protein SFB4_242G4 [Candidatus Arthromitus sp. SFB-4]
gi|417968891|ref|ZP_12609863.1| hypothetical protein SFB6_099G3 [Candidatus Arthromitus sp. SFB-co]
gi|418373334|ref|ZP_12965423.1| hypothetical protein SFBSU_009G2 [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342330530|dbj|BAK57172.1| hypothetical protein SFBM_1413 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|380334723|gb|EIA25074.1| hypothetical protein SFB1_013G1 [Candidatus Arthromitus sp. SFB-1]
gi|380337614|gb|EIA26643.1| hypothetical protein SFB4_242G4 [Candidatus Arthromitus sp. SFB-4]
gi|380338792|gb|EIA27647.1| hypothetical protein SFB6_099G3 [Candidatus Arthromitus sp. SFB-co]
gi|380341170|gb|EIA29663.1| hypothetical protein SFBSU_009G2 [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 171
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLD--VARQKLIEELVEFSMIREVKVVVVFDALMS 99
+ ++ VD YNV WP +N LD + R+KLI + +++ +V ++FDA S
Sbjct: 1 MKIIFVDAYNVINSWPNFKN---SRDLDFSIVREKLISMVESYALFNGYRVFLIFDAYNS 57
Query: 100 GLPTHKEEFI--GVDIVFPG-ETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGA 156
++ I + I++ + AD +IE+ +A + ++ VVTSD+++Q +
Sbjct: 58 DSTNERKIDISDNLSIIYTNKDEFADTYIER--IAHKMAKKVEIIVVTSDYMEQQIIFQR 115
Query: 157 GAFVWS 162
GA+ S
Sbjct: 116 GAYRMS 121
>gi|239626861|ref|ZP_04669892.1| small GTP-binding protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517007|gb|EEQ56873.1| small GTP-binding protein [Clostridiales bacterium 1_7_47FAA]
Length = 909
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L N K ++ AR +L++ L + +++ ++VVFDA + G T
Sbjct: 746 LLVDGYNIIYAWEEL-NVLAKDNMEGARGRLMDLLCNYQAVKKCNLIVVFDAYRVKGHET 804
Query: 104 HKEEFIGVDIVFPGET-CADAWIEK--EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
++ + +V+ E AD +IEK A R D V V TSD L+Q G G +
Sbjct: 805 EILDYHNIHVVYTKEAETADQYIEKFAHENARRHD----VSVATSDGLEQVIIRGQGCRL 860
Query: 161 WSSKAL 166
S++ L
Sbjct: 861 VSAREL 866
>gi|355628271|ref|ZP_09049668.1| hypothetical protein HMPREF1020_03747 [Clostridium sp. 7_3_54FAA]
gi|354819826|gb|EHF04262.1| hypothetical protein HMPREF1020_03747 [Clostridium sp. 7_3_54FAA]
Length = 898
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LL+DGYN+ W +L + +D AR KL++ L + ++ +V+ VFDA + H
Sbjct: 738 LLIDGYNIIFAWEEL-RELAERNIDSARGKLLDILCNYQGAKKCQVIAVFDAYR--VQGH 794
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGA 158
K EF+ + +V+ E AD +IEK D K V V TSD L+Q G G
Sbjct: 795 KTEFLDYHNIHVVYTKEAETADQYIEK----FAHDNASKYDVTVATSDRLEQIIIRGQGC 850
Query: 159 FVWSSK 164
+ S++
Sbjct: 851 RLISAR 856
>gi|325662678|ref|ZP_08151275.1| hypothetical protein HMPREF0490_02015 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471017|gb|EGC74244.1| hypothetical protein HMPREF0490_02015 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 912
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL- 97
D LLVDGYNV W L+ K ++ AR KL++ L + ++ +++VFDA
Sbjct: 732 DQMEEYLLVDGYNVIFAWEDLKE-LAKVNIEGARNKLMDVLCNYQGFKKCNLILVFDAYK 790
Query: 98 MSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYG 155
+ G +++ + +V+ E AD +IEK + E G V V TSD+++Q G
Sbjct: 791 VQGQELGVQKYHNIYVVYTKEAETADQYIEK---VVHEIGRKYHVTVATSDNVEQVVTLG 847
Query: 156 AGAFVWSSKALVSEV 170
G + S++ L +EV
Sbjct: 848 QGGKLLSARELRTEV 862
>gi|323485546|ref|ZP_08090892.1| hypothetical protein HMPREF9474_02643 [Clostridium symbiosum
WAL-14163]
gi|323401194|gb|EGA93546.1| hypothetical protein HMPREF9474_02643 [Clostridium symbiosum
WAL-14163]
Length = 898
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LL+DGYN+ W +L + +D AR KL++ L + ++ +V+ VFDA + H
Sbjct: 738 LLIDGYNIIFAWEEL-RELAERNIDSARGKLLDILCNYQGAKKCQVIAVFDAYR--VQGH 794
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGA 158
K EF+ + +V+ E AD +IEK D K V V TSD L+Q G G
Sbjct: 795 KTEFLDYHNIHVVYTKEAETADQYIEK----FAHDNASKYDVTVATSDRLEQIIIRGQGC 850
Query: 159 FVWSSK 164
+ S++
Sbjct: 851 RLISAR 856
>gi|323694530|ref|ZP_08108697.1| hypothetical protein HMPREF9475_03561 [Clostridium symbiosum
WAL-14673]
gi|323501404|gb|EGB17299.1| hypothetical protein HMPREF9475_03561 [Clostridium symbiosum
WAL-14673]
Length = 496
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LL+DGYN+ W +L + +D AR KL++ L + ++ +V+ VFDA + H
Sbjct: 336 LLIDGYNIIFAWEEL-RELAERNIDSARGKLLDILCNYQGAKKCQVIAVFDAYR--VQGH 392
Query: 105 KEEFI---GVDIVFPGET-CADAWIEKEIVALREDGCPK--VWVVTSDHLQQHAAYGAGA 158
K EF+ + +V+ E AD +IEK D K V V TSD L+Q G G
Sbjct: 393 KTEFLDYHNIHVVYTKEAETADQYIEK----FAHDNASKYDVTVATSDRLEQIIIRGQGC 448
Query: 159 FVWSSKALVSEV 170
+ S++ E
Sbjct: 449 RLISAREFWEET 460
>gi|384915927|ref|ZP_10016130.1| PIN domain containing protein [Methylacidiphilum fumariolicum SolV]
gi|384526625|emb|CCG92001.1| PIN domain containing protein [Methylacidiphilum fumariolicum SolV]
Length = 155
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS 99
N++P+L++DGYNV W L+ + L AR+ LIE L + +VV+VFD
Sbjct: 7 NSLPLLVIDGYNVIHAWNDLKVAQ-RQSLRKARELLIERLSILHDLEIYQVVLVFDGKSP 65
Query: 100 ---GLPTHKEEFIGVDIVF-PGETCADAWIEK---EIVALREDGCPKVWVVTSDHLQQHA 152
+P ++FI IVF P AD IEK E VA R+ V VVTSD ++
Sbjct: 66 EPVAIPPVSDDFI---IVFSPKGMSADGLIEKYVNESVARRQ-----VMVVTSDLEEKRQ 117
Query: 153 AYGAGAFVWSSKALVSEVS 171
GAF S + L E++
Sbjct: 118 VESMGAFCMSPEWLQQELA 136
>gi|160947202|ref|ZP_02094369.1| hypothetical protein PEPMIC_01135 [Parvimonas micra ATCC 33270]
gi|158446336|gb|EDP23331.1| hypothetical protein PEPMIC_01135 [Parvimonas micra ATCC 33270]
Length = 173
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
++++DGYN+ W K + F+ + AR +LI ++ EFS + + +++VFDA
Sbjct: 5 KLIIIDGYNILNAWEKYK-PFLNLSFENARHELIYDMGEFSKLIGIDLLLVFDAYKINFK 63
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFV 160
+ G+++V+ + AD +IEK+ L E G V V T D L Q G V
Sbjct: 64 GTSDVIKGIEVVYTKQNETADQFIEKK---LDEIGRKILVSVGTDDTLIQKLVTQRGGIV 120
Query: 161 WSSKALV 167
+SK L+
Sbjct: 121 LTSKELL 127
>gi|153813291|ref|ZP_01965959.1| hypothetical protein RUMOBE_03708 [Ruminococcus obeum ATCC 29174]
gi|149830581|gb|EDM85672.1| putative translation elongation factor G [Ruminococcus obeum ATCC
29174]
Length = 926
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 35/171 (20%)
Query: 4 PSTSYRRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYWPKLENHF 63
P+T YR +K +EE LLVDGYN+ W +L N
Sbjct: 744 PATRYRARKPRQEEY--------------------------LLVDGYNIIFSWEEL-NEL 776
Query: 64 IKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFI---GVDIVFPGET- 119
K + A KL++ L + R+ +++VFDA + H EE I + +V+ E
Sbjct: 777 AKENIHAACDKLMDILSNYQGYRKCTLILVFDAYK--VEGHVEEIIPYHNIYVVYTKEAE 834
Query: 120 CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
AD +IEK + + +V V TSD L+Q G GA S++ L E+
Sbjct: 835 TADQYIEKTVHRIGRQ--YQVTVATSDGLEQVIIMGQGAHRISAQGLKKEI 883
>gi|167769086|ref|ZP_02441139.1| hypothetical protein ANACOL_00409 [Anaerotruncus colihominis DSM
17241]
gi|167668726|gb|EDS12856.1| putative translation elongation factor G [Anaerotruncus colihominis
DSM 17241]
Length = 897
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ W + + LD ARQ L++ L + R+ V++VFDA T
Sbjct: 727 LLVDGYNMIFAWEDFK-RLARDHLDAARQALMDLLCNYQGFRKCAVILVFDAYKVPRGTG 785
Query: 105 K-EEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + +V+ E ADA+IEK V G +V V TSD +Q G GA
Sbjct: 786 AVSRYHNIHVVYTKEAETADAFIEK--VTYEIGGRRRVRVATSDSAEQLIILGHGAL 840
>gi|259047741|ref|ZP_05738142.1| tetracycline resistance protein [Granulicatella adiacens ATCC
49175]
gi|259035932|gb|EEW37187.1| tetracycline resistance protein [Granulicatella adiacens ATCC
49175]
Length = 178
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHK 105
+VDGYN+ G WP+L + L+ AR LI+ F ++V +VFDA T
Sbjct: 7 IVDGYNMIGAWPELVALKKQDDLESARDLLIQRCSNFQKFENIEVWIVFDAQFVPGITQS 66
Query: 106 EEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSK 164
+ V ++F E AD++IE+ + + +V V TSD +Q + GA S++
Sbjct: 67 FDQAQVKVIFTSEGETADSYIERTVSEM-NTRLVQVSVATSDLAEQWLIFQKGALRKSAR 125
Query: 165 ALVSEV 170
E+
Sbjct: 126 DFYKEL 131
>gi|294791944|ref|ZP_06757092.1| tetracycline resistance protein [Veillonella sp. 6_1_27]
gi|294457174|gb|EFG25536.1| tetracycline resistance protein [Veillonella sp. 6_1_27]
Length = 177
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 8/127 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMSG- 100
+L+VDGYNV W L+ L+ AR +L + L+ + + +V++VFD SG
Sbjct: 5 ILIVDGYNVIFAWTHLKK-LAHESLEHARMELRDRLLNYGKFKGYEVILVFDGKYTKSGG 63
Query: 101 -LPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + FI V GET AD++IE+E+ LR+ V+VVTSD +Q+ G+G
Sbjct: 64 SIESITSGFIEV-YTEDGET-ADSFIEREVF-LRKGKYTNVYVVTSDGAEQNQILGSGGL 120
Query: 160 VWSSKAL 166
++ L
Sbjct: 121 RIPAREL 127
>gi|282850300|ref|ZP_06259679.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
gi|294793808|ref|ZP_06758945.1| tetracycline resistance protein [Veillonella sp. 3_1_44]
gi|282579793|gb|EFB85197.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
gi|294455378|gb|EFG23750.1| tetracycline resistance protein [Veillonella sp. 3_1_44]
Length = 177
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMSG- 100
+L+VDGYNV W L+ L+ AR +L + L+ + + +V++VFD SG
Sbjct: 5 ILIVDGYNVIFAWTHLKK-LAHESLEHARMELRDRLLNYGKFKGYEVILVFDGKYTKSGG 63
Query: 101 -LPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + FI V GET AD++IE+E+ LR+ V+VVTSD +Q+ G+G
Sbjct: 64 SIESITSGFIEV-YTEDGET-ADSFIEREVF-LRKGKYTNVYVVTSDGAEQNQILGSGGL 120
Query: 160 VWSSKALVSEVSL 172
++ L + + +
Sbjct: 121 RIPARELQNMIRI 133
>gi|336422966|ref|ZP_08603105.1| hypothetical protein HMPREF0993_02482 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336006812|gb|EGN36844.1| hypothetical protein HMPREF0993_02482 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 888
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L+ + + AR +L++ L ++ R++ +++VFDA + G P
Sbjct: 720 LLVDGYNIIFAWEELKQ-LAEDNIMSARDRLMDILSDYQGFRKMTLILVFDAYKVEGNPG 778
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEI--VALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
++ + +V+ E AD +IEK + + R V V TSD L+Q G G
Sbjct: 779 TIFKYHNIYVVYTKEAETADQYIEKTVHKIGRRH----HVTVATSDALEQVIILGQGGHR 834
Query: 161 WSSKALVSEVSL 172
S++ L +E+ L
Sbjct: 835 ISAQGLQNEILL 846
>gi|154499834|ref|ZP_02037872.1| hypothetical protein BACCAP_03491 [Bacteroides capillosus ATCC
29799]
gi|150271432|gb|EDM98689.1| putative translation elongation factor G [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 895
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM 98
D+ LLVDGYN+ W +L+ + LD ARQ L++ L + R+ V++VFDA
Sbjct: 730 DSGPEYLLVDGYNIIFAWDELKA-VARTSLDAARQLLMDILSNYQGFRKCVVILVFDAYK 788
Query: 99 SGLPTHK-EEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGA 156
T ++ + +V+ E ADA+IE+ L + V V TSD +Q G
Sbjct: 789 VPRNTGDVSKYHNIYVVYTKEAETADAYIERATYELGKH--HHVRVATSDSAEQLIILGH 846
Query: 157 GAFVWSSKALVSEV 170
GA S++ +EV
Sbjct: 847 GALRVSARIFKAEV 860
>gi|336428048|ref|ZP_08608036.1| hypothetical protein HMPREF0994_04042 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336007543|gb|EGN37567.1| hypothetical protein HMPREF0994_04042 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 898
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV W L + +D A+ KL++ L + I +V+VVFDA + G T
Sbjct: 731 LLVDGYNVIFAWDDL-RELAETNIDGAKGKLLDILCNYQGIVRCQVIVVFDAYRVQGHVT 789
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFVW 161
++ + +V+ E AD +IEK E+G + V TSD L+Q G G +
Sbjct: 790 EVLDYHNIHVVYTREAETADQYIEK---FTHENGKKYDITVATSDGLEQVIIRGQGCRLL 846
Query: 162 SSKALVSEVS 171
S++ L EV
Sbjct: 847 SARELEEEVK 856
>gi|196233963|ref|ZP_03132800.1| protein of unknown function DUF901 [Chthoniobacter flavus Ellin428]
gi|196222012|gb|EDY16545.1| protein of unknown function DUF901 [Chthoniobacter flavus Ellin428]
Length = 143
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L+VDG++V WP+L + R ++AR +L++ L ++ V+VVVVFD G +
Sbjct: 4 LIVDGHSVIFAWPELRKLHGR-RTEIARNELVKLLTDYQDASGVRVVVVFDG--RGAKAN 60
Query: 105 KEEFIGVDIVFPGET--CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ G +F T AD+ +E+ + + ++ V T DHL+Q A GA V S
Sbjct: 61 EDTAPGGIQIFYSATGQTADSIVERLVA--KYASQHEITVATDDHLEQQTATTFGALVVS 118
Query: 163 SKAL 166
++ L
Sbjct: 119 AEGL 122
>gi|225374854|ref|ZP_03752075.1| hypothetical protein ROSEINA2194_00477 [Roseburia inulinivorans DSM
16841]
gi|225213315|gb|EEG95669.1| hypothetical protein ROSEINA2194_00477 [Roseburia inulinivorans DSM
16841]
Length = 900
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W L+ +D AR KL++ L + ++ ++VVFDA + G T
Sbjct: 739 LLVDGYNIIFAWESLKE-LAAVNIDGARGKLLDILCNYQGTKKCNLIVVFDAYRVKGHQT 797
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFVW 161
+ + +V+ E ADA+IEK E+G V V TSD L+Q G G +
Sbjct: 798 EMFDHHNIHVVYTKEAETADAYIEK---FAHENGRKYHVTVATSDGLEQIIITGQGCHLL 854
Query: 162 SSKALVSEV 170
S++ EV
Sbjct: 855 SAREFEREV 863
>gi|313893285|ref|ZP_07826860.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442181|gb|EFR60598.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
F0412]
Length = 177
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+L+VDGYNV W L+ L+ AR +L ++L+ + + +V++VFD +
Sbjct: 5 ILIVDGYNVIFAWTHLKK-LAHESLEHARMELRDKLLNYGKFKGYEVILVFDGKYTKSGG 63
Query: 104 HKEEFI-GVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
E G V+ GET AD++IE+E+ LR+ V+VVTSD +Q+ G+G
Sbjct: 64 SVEVITNGFMEVYTDDGET-ADSFIEREVF-LRKGKYTNVYVVTSDGAEQNQILGSGGLR 121
Query: 161 WSSKALVSEVSL 172
++ L + + L
Sbjct: 122 IPARELQNMIRL 133
>gi|148381439|ref|YP_001255980.1| hypothetical protein CBO3498 [Clostridium botulinum A str. ATCC
3502]
gi|153933412|ref|YP_001385814.1| hypothetical protein CLB_3557 [Clostridium botulinum A str. ATCC
19397]
gi|153937756|ref|YP_001389221.1| hypothetical protein CLC_3446 [Clostridium botulinum A str. Hall]
gi|153939361|ref|YP_001392852.1| hypothetical protein CLI_3684 [Clostridium botulinum F str.
Langeland]
gi|384463813|ref|YP_005676408.1| hypothetical protein CBF_3670 [Clostridium botulinum F str. 230613]
gi|387819780|ref|YP_005680127.1| hypothetical protein H04402_03601 [Clostridium botulinum H04402
065]
gi|421838075|ref|ZP_16272062.1| hypothetical protein CFSAN001627_20850 [Clostridium botulinum
CFSAN001627]
gi|148290923|emb|CAL85059.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
gi|152929456|gb|ABS34956.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152933670|gb|ABS39169.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
gi|152935257|gb|ABS40755.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
gi|295320830|gb|ADG01208.1| conserved hypothetical protein [Clostridium botulinum F str.
230613]
gi|322807824|emb|CBZ05399.1| hypothetical protein DUF901, similar to C-terminal domain of
ribosome protection-type Tc-resistance proteins
[Clostridium botulinum H04402 065]
gi|409739609|gb|EKN40243.1| hypothetical protein CFSAN001627_20850 [Clostridium botulinum
CFSAN001627]
Length = 169
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFDALMS-GLP 102
+ VD YNV W +L+ IK L+++R++L++ L ++ + ++ VVFDA + G+
Sbjct: 4 IFVDAYNVINSWKELKK--IKDYNLEMSREQLLDILNNYATYNQYRIYVVFDAHQTEGVE 61
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFV 160
++ + +VF E AD++IE+ I L G V VVTSD L+Q + GA
Sbjct: 62 NTEKINDNLIVVFTKEGETADSFIERSINDL---GRKIDVSVVTSDSLEQQLIFQRGATR 118
Query: 161 WSSKALVSEV 170
SS S+V
Sbjct: 119 ISSLEFYSQV 128
>gi|158336302|ref|YP_001517476.1| hypothetical protein AM1_3164 [Acaryochloris marina MBIC11017]
gi|158306543|gb|ABW28160.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 183
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKG-------RLDVARQKLIEELVEFSMIREVKVVVVFD 95
P+LLVDGYN+ G W + +N L+ AR L + L +S + + +VFD
Sbjct: 8 PILLVDGYNILGVWSQHQNGHAPAEIFENIQELETARLHLADALASYSAFQGYQAQLVFD 67
Query: 96 ALMSGLPTHKEEFI-GVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHA 152
A E F +D+ + G+T AD +IE R ++ V TSD QQ
Sbjct: 68 AQNRQEKGVCEPFTDSLDLYYTDYGQT-ADTYIEMYCAKARSRQA-RLIVATSDRAQQLT 125
Query: 153 AYGAGAFVWSSKALVSEVS 171
G GA S+ LV E++
Sbjct: 126 VMGYGAEWMSALQLVKEMA 144
>gi|167758987|ref|ZP_02431114.1| hypothetical protein CLOSCI_01334 [Clostridium scindens ATCC 35704]
gi|167663394|gb|EDS07524.1| putative translation elongation factor G [Clostridium scindens ATCC
35704]
Length = 888
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L+ + + AR +L++ L ++ R++ +++VFDA + G P
Sbjct: 720 LLVDGYNIIFAWEELKQ-LAEDNIMSARDRLMDILSDYQGFRKMTLILVFDAYKVEGNPG 778
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IEK A + V V TSD L+Q G G S
Sbjct: 779 TIFKYHNIYVVYTKEAETADQYIEK--TAHKIGRRHHVTVATSDALEQVIILGQGGHRIS 836
Query: 163 SKALVSEVSL 172
++ L +E+ L
Sbjct: 837 AQGLQNEILL 846
>gi|238019169|ref|ZP_04599595.1| hypothetical protein VEIDISOL_01032 [Veillonella dispar ATCC 17748]
gi|416999207|ref|ZP_11939876.1| hypothetical protein HMPREF9323_0677 [Veillonella parvula
ACS-068-V-Sch12]
gi|237863868|gb|EEP65158.1| hypothetical protein VEIDISOL_01032 [Veillonella dispar ATCC 17748]
gi|333977360|gb|EGL78219.1| hypothetical protein HMPREF9323_0677 [Veillonella parvula
ACS-068-V-Sch12]
Length = 177
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 24/141 (17%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFD-------- 95
+L+VDGYNV W L+ L+ AR +L + L+ + + +V++VFD
Sbjct: 5 ILIVDGYNVIFAWTHLKK-LAHESLEHARMELRDRLLNYGKFKGYEVILVFDGKYTKSGG 63
Query: 96 ---ALMSG-LPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQH 151
A+ SG L + E+ GET AD++IE+E+ LR+ V+VVTSD +Q+
Sbjct: 64 SVEAITSGFLEVYTED---------GET-ADSFIEREVF-LRKGKYTNVYVVTSDGAEQN 112
Query: 152 AAYGAGAFVWSSKALVSEVSL 172
G+G ++ L + + +
Sbjct: 113 QILGSGGLRIPARELQNMIRI 133
>gi|168178814|ref|ZP_02613478.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|170755536|ref|YP_001783139.1| hypothetical protein CLD_1004 [Clostridium botulinum B1 str. Okra]
gi|226950951|ref|YP_002806042.1| hypothetical protein CLM_3968 [Clostridium botulinum A2 str. Kyoto]
gi|429246813|ref|ZP_19210109.1| hypothetical protein CFSAN001628_017409 [Clostridium botulinum
CFSAN001628]
gi|169120748|gb|ACA44584.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
gi|182669976|gb|EDT81952.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|226840876|gb|ACO83542.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
gi|428756147|gb|EKX78723.1| hypothetical protein CFSAN001628_017409 [Clostridium botulinum
CFSAN001628]
Length = 169
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFDALMS-GLP 102
+ VD YNV W +L+ IK L+++R++L++ L ++ + ++ VVFDA + G+
Sbjct: 4 IFVDAYNVINSWKELKK--IKDYNLEMSREQLLDILNNYASYNQYRIYVVFDAHQTEGVE 61
Query: 103 THKEEFIGVDIVFPGE-TCADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFV 160
++ + +VF E AD++IE+ I L G V VVTSD L+Q + GA
Sbjct: 62 NTEKINDNLIVVFTKEGETADSFIERSINDL---GRKIDVSVVTSDSLEQQLIFQRGATR 118
Query: 161 WSSKALVSEV 170
SS S+V
Sbjct: 119 ISSLEFYSQV 128
>gi|269798073|ref|YP_003311973.1| hypothetical protein [Veillonella parvula DSM 2008]
gi|269094702|gb|ACZ24693.1| protein of unknown function DUF901 [Veillonella parvula DSM 2008]
Length = 177
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA--LMSG- 100
+L+VDGYNV W L+ L+ AR +L + L+ + + +V++VFD SG
Sbjct: 5 ILIVDGYNVIFAWTYLKK-LAHESLEHARMELRDRLLNYGKFKGYEVILVFDGKYTKSGG 63
Query: 101 -LPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+ + FI V GET AD++IE+E+ LR+ V+VVTSD +Q+ G+G
Sbjct: 64 SIESITSGFIEV-YTEDGET-ADSFIEREVF-LRKGKYTNVYVVTSDGAEQNQILGSGGL 120
Query: 160 VWSSKALVSEVSL 172
++ L + + +
Sbjct: 121 RIPARELQNMIRI 133
>gi|434390941|ref|YP_007125888.1| protein of unknown function DUF901 [Gloeocapsa sp. PCC 7428]
gi|428262782|gb|AFZ28728.1| protein of unknown function DUF901 [Gloeocapsa sp. PCC 7428]
Length = 201
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 63/150 (42%), Gaps = 24/150 (16%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
VLLVDGYN+ G W L+ L+ +R +LIE+L +S + VVFDA +
Sbjct: 9 VLLVDGYNIIGAWSCLKKIRDSNGLEASRWQLIEDLTNYSAYQGYITQVVFDAHYQNTCS 68
Query: 104 HKE---EFIGVDIVFPGETCADAWIEKEIVALRE--------------------DGCPKV 140
+ E E + V GET AD +IEK R ++
Sbjct: 69 NYEVITETLSVYYTNFGET-ADTYIEKVCAGFRPYLRGIEPNDTTNKNSKLPIYSRISRI 127
Query: 141 WVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
V TSD QQ G GA S+ L EV
Sbjct: 128 IVATSDRAQQLTVVGYGAEWLSAAQLKFEV 157
>gi|218282732|ref|ZP_03488929.1| hypothetical protein EUBIFOR_01515 [Eubacterium biforme DSM 3989]
gi|218216377|gb|EEC89915.1| hypothetical protein EUBIFOR_01515 [Eubacterium biforme DSM 3989]
Length = 832
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 9/139 (6%)
Query: 33 NTNQ-GIDNAVP-VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKV 90
N NQ I++ P L++DGYN+ W L++ K ++ AR +LI + + +++KV
Sbjct: 681 NLNQIHIEDKKPECLMIDGYNMIYDWQDLKD-IAKVNIESARDELINRISNYQGYKQIKV 739
Query: 91 VVVFDA--LMSGLPTHKEEFIGVDIVFPG-ETCADAWIEKEIVALREDGCPKVWVVTSDH 147
++VFD + + +H + +DI++ AD++IEK + L++ ++ V TSD
Sbjct: 740 ILVFDGYRVKNNAGSHFNQG-NLDIIYTKYNQTADSYIEKAVHDLKKK--YELSVATSDG 796
Query: 148 LQQHAAYGAGAFVWSSKAL 166
L Q+A GA S++ L
Sbjct: 797 LIQNAILANGAKRISAREL 815
>gi|359457714|ref|ZP_09246277.1| hypothetical protein ACCM5_03243 [Acaryochloris sp. CCMEE 5410]
Length = 183
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKG-------RLDVARQKLIEELVEFSMIREVKVVVVFD 95
P+LLVDGYN+ G W + +N L+ AR L + L +S + + +VFD
Sbjct: 8 PILLVDGYNILGVWSQHQNGHAPAEIFENIQELETARLHLADALASYSAFQGYQAQLVFD 67
Query: 96 ALMSGLPTHKEEFI-GVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHA 152
A E F +D+ + G+T AD +IE R ++ V TSD QQ
Sbjct: 68 AQNRQEKGVCEPFTDSLDLYYTDYGQT-ADTYIEMYCAKARARQS-RLIVATSDRAQQLT 125
Query: 153 AYGAGAFVWSSKALVSEVS 171
G GA S+ LV E++
Sbjct: 126 VMGYGAEWMSALQLVKEMA 144
>gi|350566008|ref|ZP_08934721.1| tetracycline resistance protein [Peptoniphilus indolicus ATCC
29427]
gi|348663215|gb|EGY79815.1| tetracycline resistance protein [Peptoniphilus indolicus ATCC
29427]
Length = 172
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L VDGYN+ W + L+ R +L + L E++ + KV+VVFDA M
Sbjct: 13 LFVDGYNIINAWGSFDKSI---PLEDQRLQLADVLSEYAHTVDEKVIVVFDAYMVKKSAG 69
Query: 105 K-EEFIGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ G+ +VF E AD +IE+++ ++ V V TSD+++Q G S
Sbjct: 70 AIYDYKGILVVFTKEFETADHYIERQLSEMKR--VKGVRVATSDNIEQQIILSRGGVRLS 127
Query: 163 SKALVSEVSL 172
++ EV L
Sbjct: 128 AREFQVEVEL 137
>gi|153852728|ref|ZP_01994165.1| hypothetical protein DORLON_00147 [Dorea longicatena DSM 13814]
gi|149754370|gb|EDM64301.1| putative translation elongation factor G [Dorea longicatena DSM
13814]
Length = 917
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV W +L+ K ++ AR KL++ L + ++ +++VFDA + G
Sbjct: 748 LLVDGYNVIFAWEELK-ELAKVSIEAARDKLMDILCNYQGYKKCVLILVFDAYKVEGYAL 806
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+++ + +V+ E AD +IEK + + V VVTSD ++Q G G S
Sbjct: 807 EIQKYHNIHVVYTKEAETADQYIEKVVHHIGRK--YHVTVVTSDGVEQVITMGQGGTRIS 864
Query: 163 SKALVSEV 170
S+ + E+
Sbjct: 865 SRDFLEEI 872
>gi|220908109|ref|YP_002483420.1| hypothetical protein Cyan7425_2712 [Cyanothece sp. PCC 7425]
gi|219864720|gb|ACL45059.1| protein of unknown function DUF901 [Cyanothece sp. PCC 7425]
Length = 188
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 39 DNAVPV-LLVDGYNVCGYWPKLENHFIKGR--------LDVARQKLIEELVEFSMIREVK 89
D PV LLVDGYN+ G W L+ +G+ L AR +LI L E++ + +
Sbjct: 3 DAPPPVTLLVDGYNMIGSWAVLKKAAGRGKHIFSDPVGLATARNQLIHLLTEYTAFQGYR 62
Query: 90 VVVVFDALMSGLPTHKEEFIG-VDIVFP--GETCADAWIEKEIVAL----REDGCPKVWV 142
+VFDA P E+ + + F G+T AD +IE+ + +L R ++ V
Sbjct: 63 TEIVFDAQHRDSPGAAEQITNHLKVYFTDFGQT-ADTYIER-VCSLAWQNRHVNLERIIV 120
Query: 143 VTSDHLQQHAAYGAGAFVWSSKALVSEVSLIIY 175
TSD + G GA S++ L +V +++
Sbjct: 121 ATSDRNHRLTVTGYGAEWMSAQRLSDDVQTVLH 153
>gi|170758401|ref|YP_001788839.1| hypothetical protein CLK_2944 [Clostridium botulinum A3 str. Loch
Maree]
gi|169405390|gb|ACA53801.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 169
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFDALMS- 99
+ + VD YNV W +L+ IK L+++R++L++ L ++ + ++ VVFDA +
Sbjct: 1 MKYIFVDAYNVINSWKELKK--IKDYNLEMSREQLLDILNNYATYNQYRIYVVFDAHQTE 58
Query: 100 -GLPTHK-EEFIGVDIVFPGETCADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGA 156
G T K + + V GET AD++IE+ I L G V VVTSD L+Q +
Sbjct: 59 GGENTEKINDNLIVVFTKEGET-ADSFIERSINDL---GRKIDVSVVTSDSLEQQLIFQR 114
Query: 157 GAFVWSSKALVSEV 170
GA SS S+V
Sbjct: 115 GATRISSLEFYSQV 128
>gi|160895031|ref|ZP_02075805.1| hypothetical protein CLOL250_02581 [Clostridium sp. L2-50]
gi|156863462|gb|EDO56893.1| putative translation elongation factor G [Clostridium sp. L2-50]
Length = 910
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSG 100
+ LLVDGYNV W L+ +D AR KLI+ + + ++++VFDA +
Sbjct: 770 IEYLLVDGYNVIFAWDDLKA-LAAVNIDSARDKLIDIMSNYQGYVGCELILVFDAYKVKQ 828
Query: 101 LPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
P + + +V+ E AD +IEK L KV V +SD L+Q G GA
Sbjct: 829 NPGSITKHGNIHVVYTKEAETADMYIEKTTHELGRK--YKVTVASSDGLEQLIIMGQGAL 886
Query: 160 VWSSKALVSEVSLI 173
SS+ L EV +
Sbjct: 887 RMSSRGLREEVERV 900
>gi|291458457|ref|ZP_06597847.1| elongation factor G [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418990|gb|EFE92709.1| elongation factor G [Oribacterium sp. oral taxon 078 str. F0262]
Length = 911
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L+VDGYN+ +P L + LD AR+KL+E L + V++VFDA + P
Sbjct: 752 LIVDGYNMIHAFPALR-EIAEENLDSAREKLLERLSNYRAYSGKNVILVFDAYRLERHPV 810
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAY-GAGAFVW 161
GV +VF E AD +IE+ L E+G +V V + D L Q A+ G G +
Sbjct: 811 ETALRSGVRVVFTKEAQTADQYIEELSRRLSEEG-GRVEVASGDRLVQLIAWSGRGVSIL 869
Query: 162 SSKAL 166
S+ L
Sbjct: 870 SAADL 874
>gi|325262706|ref|ZP_08129442.1| putative tetracycline resistance protein TetP [Clostridium sp. D5]
gi|324031800|gb|EGB93079.1| putative tetracycline resistance protein TetP [Clostridium sp. D5]
Length = 912
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-M 98
N LLVDGYN+ W L + + ++ AR KL++ L + ++ +++VFDA +
Sbjct: 741 NRETYLLVDGYNIIFAWEDL-SELAETNIESARDKLMDILCNYQGYKQCTLILVFDAYKV 799
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
G ++ + +V+ E AD +IEK + R V V TSD L+Q G G
Sbjct: 800 EGNLGEVLKYHNIYVVYTKEAETADQYIEKTV--RRMGRGYDVTVATSDALEQVIILGQG 857
Query: 158 AFVWSSKALVSEVSLI 173
A S+ L EV L+
Sbjct: 858 AQRMSADGLKEEVELM 873
>gi|302038270|ref|YP_003798592.1| hypothetical protein NIDE2971 [Candidatus Nitrospira defluvii]
gi|300606334|emb|CBK42667.1| conserved protein of unknown function DUF901 [Candidatus Nitrospira
defluvii]
Length = 177
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ G + GRL+ AR+ L++ L + + + VVFD G
Sbjct: 5 LLVDGYNLVGS-AGMALPAGSGRLEGARETLLKNLAGYRQRKGHAITVVFDGWQGGHGAE 63
Query: 105 KEEF-IGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ EF GV++V+ GE AD I++ + L C VV+SDH ++A AGAFV
Sbjct: 64 QREFQSGVEVVYSKRGER-ADQVIQR-LARLYGRDCA---VVSSDHEVVNSARAAGAFV 117
>gi|335047749|ref|ZP_08540770.1| hypothetical protein HMPREF9126_0646 [Parvimonas sp. oral taxon 110
str. F0139]
gi|333761557|gb|EGL39112.1| hypothetical protein HMPREF9126_0646 [Parvimonas sp. oral taxon 110
str. F0139]
Length = 118
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
++++DGYN+ W K + F+K + AR +LI ++ EFS + + +++VFDA
Sbjct: 5 KLIIIDGYNILNAWEKYK-PFLKLSFENARNELIYDMGEFSKLIGIDLLLVFDAYKINFK 63
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALRE 134
E G+++V+ + AD +IEK + L E
Sbjct: 64 GSSEVIKGIEVVYTKQNETADQFIEKNWMKLEE 96
>gi|339444325|ref|YP_004710329.1| hypothetical protein EGYY_07310 [Eggerthella sp. YY7918]
gi|338904077|dbj|BAK43928.1| hypothetical protein EGYY_07310 [Eggerthella sp. YY7918]
Length = 178
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 44 VLLVDGYNVCGYWPKLEN----HFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMS 99
+L+VDGYNV + + + AR+ L+ +++ ++ RE ++VFD +
Sbjct: 8 LLIVDGYNVLRSGSRYREITGPDYTDDTFNTARETLVNDVINYAG-REWSAIIVFDGAQN 66
Query: 100 GLPTHKEEFIG-VDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
T + E +G V I+F P AD IEK RE + VVTSD Q +G+G
Sbjct: 67 EFSTGEAETVGGVRIMFSPAGQSADKVIEKLAHDARERQV-ETLVVTSDATVQDTVFGSG 125
Query: 158 AFVWSSKALVSEVSL 172
S+ EV +
Sbjct: 126 VDRMSANGFSREVGM 140
>gi|187776559|ref|ZP_02993032.1| hypothetical protein CLOSPO_00071 [Clostridium sporogenes ATCC
15579]
gi|187775218|gb|EDU39020.1| hypothetical protein CLOSPO_00071 [Clostridium sporogenes ATCC
15579]
Length = 169
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+ VD YNV W +L+ IK L+++R++L++ L ++ + ++ VVFDA +
Sbjct: 4 IFVDAYNVINSWKELKK--IKDYNLEMSREQLLDILNNYASYNQYRIYVVFDAHQTEGAE 61
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ E+ IV GET AD++IE+ I L V VVTSD L+Q + GA
Sbjct: 62 NIEKINNNLIVVFTKEGET-ADSFIERSINDL--GRKIDVSVVTSDSLEQQLIFQRGATR 118
Query: 161 WSSKALVSEV 170
SS S+V
Sbjct: 119 ISSLEFYSQV 128
>gi|355670750|ref|ZP_09057497.1| hypothetical protein HMPREF9469_00534 [Clostridium citroniae
WAL-17108]
gi|354816187|gb|EHF00776.1| hypothetical protein HMPREF9469_00534 [Clostridium citroniae
WAL-17108]
Length = 911
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYN+ W +L N + ++ AR +L++ L + +R +++VFDA + G T
Sbjct: 744 LLVDGYNIIYAWDEL-NSLAEDNMEGARGRLMDLLCNYQAVRRCNLILVFDAYRVKGHAT 802
Query: 104 HKEEFIGVDIVFPGET-CADAWIEK--EIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
++ + +V+ E AD +IEK A R D + V TSD L+Q G G
Sbjct: 803 EILDYHNIHVVYTKEAETADQYIEKFAHENARRFD----ISVATSDGLEQVIILGQGCRR 858
Query: 161 WSSKAL 166
S++ L
Sbjct: 859 VSAREL 864
>gi|424827457|ref|ZP_18252261.1| hypothetical protein IYC_05263 [Clostridium sporogenes PA 3679]
gi|365980071|gb|EHN16108.1| hypothetical protein IYC_05263 [Clostridium sporogenes PA 3679]
Length = 169
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+ VD YNV W +L+ IK L+++R++L++ L ++ + ++ VVFDA +
Sbjct: 4 IFVDAYNVINSWKELKK--IKDYNLEMSREQLLDILNNYASYNQYRIYVVFDAHQTEGAE 61
Query: 104 HKEEFIGVDIVF---PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
+ E+ IV GET AD++IE+ + L +V VVTSD L+Q + GA
Sbjct: 62 NIEKINNNLIVVFTKEGET-ADSFIERSVNDL--GRKIEVSVVTSDSLEQQLIFQRGATR 118
Query: 161 WSSKALVSEV 170
SS S+V
Sbjct: 119 ISSLEFYSQV 128
>gi|163814273|ref|ZP_02205662.1| hypothetical protein COPEUT_00424 [Coprococcus eutactus ATCC 27759]
gi|158449908|gb|EDP26903.1| putative translation elongation factor G [Coprococcus eutactus ATCC
27759]
Length = 928
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
++VDGYNV W L + +D AR KL++ L + ++VVFD + +
Sbjct: 789 VIVDGYNVIFAWDTLR-ELSEHNIDSARGKLMDILSNYQGYMNCHLIVVFDGYK--VKDN 845
Query: 105 KEE---FIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
K E + +++V+ GET ADA IEK L KV VVTSD L+Q G GA
Sbjct: 846 KGERFPYDDIEVVYTKEGET-ADAHIEKLTHELARK--HKVTVVTSDGLEQIVTMGQGAI 902
Query: 160 VWSSKALVSEVSLI 173
SS+ EV +
Sbjct: 903 RMSSRDFKLEVERV 916
>gi|168181846|ref|ZP_02616510.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237796960|ref|YP_002864512.1| hypothetical protein CLJ_B3809 [Clostridium botulinum Ba4 str. 657]
gi|182674871|gb|EDT86832.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229263897|gb|ACQ54930.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 169
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKG-RLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
+ VD YNV W +L+ IK L+++R++L++ L ++ + ++ VVFDA +
Sbjct: 4 IFVDAYNVINSWKELKK--IKDYNLEMSREQLLDILNNYASYNQYRIYVVFDAHQTEGAE 61
Query: 104 HKEEFI-GVDIVFPGE-TCADAWIEKEIVALREDGCP-KVWVVTSDHLQQHAAYGAGAFV 160
+ E+ + +VF E AD++IE+ I L G V VVTSD L+Q + GA
Sbjct: 62 NIEKINDNLIVVFTKEGETADSFIERSINDL---GRKIDVSVVTSDSLEQQLIFQRGATR 118
Query: 161 WSSKALVSEV 170
SS S+V
Sbjct: 119 ISSLEFYSQV 128
>gi|373119720|ref|ZP_09533811.1| small GTP-binding protein domain protein [Lachnospiraceae bacterium
7_1_58FAA]
gi|371662013|gb|EHO27229.1| small GTP-binding protein domain protein [Lachnospiraceae bacterium
7_1_58FAA]
Length = 878
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LL DGYN+ W +L+ + LD ARQ L+E L + ++ V++VFDA +P
Sbjct: 716 LLADGYNLIFAWEELKA-VARDNLDAARQMLMEVLSNYQGFKQNIVILVFDAYR--VPRS 772
Query: 105 KEE---FIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
++ + + +V+ E AD +IE+ + +V V TSD +Q G GA
Sbjct: 773 VQDVTKYHNIYVVYTKEAETADTYIERATYEIGRHH--RVRVATSDGAEQLIILGHGALR 830
Query: 161 WSSKALVSEV 170
S+ A +EV
Sbjct: 831 LSASAFKAEV 840
>gi|365844436|ref|ZP_09385283.1| putative translation elongation factor G [Flavonifractor plautii
ATCC 29863]
gi|364564936|gb|EHM42677.1| putative translation elongation factor G [Flavonifractor plautii
ATCC 29863]
Length = 878
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LL DGYN+ W +L+ + LD ARQ L+E L + ++ V++VFDA +P
Sbjct: 716 LLADGYNLIFAWEELKA-VARDNLDAARQMLMEVLSNYQGFKQNIVILVFDAYR--VPRS 772
Query: 105 KEE---FIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
++ + + +V+ E AD +IE+ + +V V TSD +Q G GA
Sbjct: 773 VQDVTKYHNIYVVYTKEAETADTYIERATYEIGRHH--RVRVATSDGAEQLIILGHGALR 830
Query: 161 WSSKALVSEV 170
S+ A +EV
Sbjct: 831 LSASAFKAEV 840
>gi|154482976|ref|ZP_02025424.1| hypothetical protein EUBVEN_00674 [Eubacterium ventriosum ATCC
27560]
gi|149736260|gb|EDM52146.1| putative translation elongation factor G [Eubacterium ventriosum
ATCC 27560]
Length = 861
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
LLVDGYN+ W +L+ K +D AR +L++ + + + V+VVFDA + H
Sbjct: 714 LLVDGYNIVFAWDELK-EIAKTNIDGARDRLLDIMCNYQGYKGNTVIVVFDAY--NVKKH 770
Query: 105 KE---EFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFV 160
E ++ + +V+ E AD +I K L +V V TSD L+Q G GA
Sbjct: 771 AETVSKYHNIYVVYTKEAETADMYIAKTTHKLANK--FQVTVATSDALEQLIIMGHGALR 828
Query: 161 WSSKALVSEV 170
S+ EV
Sbjct: 829 MSASNFKEEV 838
>gi|283769407|ref|ZP_06342306.1| conserved hypothetical protein [Bulleidia extructa W1219]
gi|283104064|gb|EFC05448.1| conserved hypothetical protein [Bulleidia extructa W1219]
Length = 146
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALM---- 98
VL+VDGYN+ W + + + G L V R++L+E L + + +++VFD
Sbjct: 7 KVLIVDGYNMIFSWQRFQ---MDGSLMVKREELVEVLFNYQAYIKESILLVFDGYRVKES 63
Query: 99 SGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAG 157
G KE + I++ E+ ADA+IEK + + V +SD L Q+A + G
Sbjct: 64 QGNRYQKE---NMTIIYTAESQTADAYIEKYVYEHHHE--FDFEVASSDALIQNAVFANG 118
Query: 158 AFVWSSKALVSEVSL 172
A S++ L + + L
Sbjct: 119 AKRVSARELENRIEL 133
>gi|373106785|ref|ZP_09521085.1| small GTP-binding protein domain protein [Stomatobaculum longum]
gi|371651724|gb|EHO17150.1| small GTP-binding protein domain protein [Stomatobaculum longum]
Length = 881
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 6 TSYRRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAVP---VLLVDGYNVCGYWPKLENH 62
T YR ++ +K+ PE + + + AVP LLVDGYN+ +P+L
Sbjct: 679 TFYRNRREDKKR-PEVKRRAASEAAKERAYRALRTAVPRKQFLLVDGYNIIFAFPELRA- 736
Query: 63 FIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFPGET--- 119
+ +D AR L++ L ++ V ++VVFDA HKEE +F T
Sbjct: 737 LAEENIDSARLALLDLLSDYQGFTGVTLIVVFDAYRR--KDHKEERYSWHNLFVVYTKTA 794
Query: 120 -CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
AD++IE + R V V TSD L+Q GA + S+ L E+
Sbjct: 795 QTADSYIES--FSGRHAATDSVTVATSDGLEQIIVRSQGALLLSASELREEM 844
>gi|451342757|ref|ZP_21911840.1| small GTP-binding protein [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449338488|gb|EMD17633.1| small GTP-binding protein [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 837
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L+VDGYN+ W +L++ + L +AR KLI L + ++ +++VFD
Sbjct: 684 LIVDGYNMIFSWDELKD-LSQTSLALARDKLINILSNYQGYKKCLLLIVFDGYKVKDNIG 742
Query: 105 KE-EFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+E + + IV+ E ADA+IE + ++ +V V +SD+++Q G GA S
Sbjct: 743 EEINYHNIHIVYTKEAQTADAYIESITKTMTDE--YRVTVASSDYMEQSMILGHGALRIS 800
Query: 163 SKALVSEV 170
++ L+ E+
Sbjct: 801 ARELMLEI 808
>gi|210632462|ref|ZP_03297390.1| hypothetical protein COLSTE_01287 [Collinsella stercoris DSM 13279]
gi|210159557|gb|EEA90528.1| hypothetical protein COLSTE_01287 [Collinsella stercoris DSM 13279]
Length = 229
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLD---------VARQKLIEELVEFSMIREVKVVVVF 94
+L+VDGYNV PK E H + R D AR LI ++ F+ R+ + VVVF
Sbjct: 56 LLVVDGYNVIHATPKYE-HLMFDRGDHPYSSDVYERARMALIGDVAAFAG-RQYEAVVVF 113
Query: 95 DALMSGLPTHKE-EFIGVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHA 152
DA + P GV + F P AD I+ RE+G VVTSD + Q
Sbjct: 114 DAAGNVSPDRPNLPQGGVRVEFSPTGVTADTVIQDLCTKAREEGR-ACSVVTSDAMIQAT 172
Query: 153 AYGAGAFVWSSKALVSEVS 171
G G S++ LV E+
Sbjct: 173 VMGHGVTRISARMLVEEIG 191
>gi|374308771|ref|YP_005055202.1| tetracycline resistance protein [Filifactor alocis ATCC 35896]
gi|291167103|gb|EFE29149.1| tetracycline resistance protein [Filifactor alocis ATCC 35896]
Length = 176
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
+L+VDGYNV W L K L AR+ L + + E+ ++ +V+DA
Sbjct: 9 EILVVDGYNVINAWSNLSG-VSKQDLSSAREMLEDMIAEYIEYFGMEGYIVYDAYNVRAK 67
Query: 103 THKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+E+ + I+F E AD++IE+ I + + VVT D +Q G GA
Sbjct: 68 EREEQKGRLHIIFTKENETADSYIERFIAQYKNKRHFDLKVVTDDMAEQQLVLGKGATRI 127
Query: 162 SSKAL 166
S++ L
Sbjct: 128 STREL 132
>gi|320528278|ref|ZP_08029440.1| putative translation elongation factor G [Solobacterium moorei
F0204]
gi|320131192|gb|EFW23760.1| putative translation elongation factor G [Solobacterium moorei
F0204]
Length = 834
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 26/188 (13%)
Query: 5 STSYRRKKVEKEELPE----DTELYRFFSYIYN---------TNQGIDNAVPVLLVDGYN 51
ST +R ++E++EL T R F+ +N + I + L+VDGYN
Sbjct: 643 STQHRTYRIEEDELKRIFDRSTSNNRNFNKQHNPIKKKPKEEKPKVIKHLPACLIVDGYN 702
Query: 52 VCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-----MSGLPTHKE 106
+ W + + L +R+KL++ L + K++VVFD + + + K+
Sbjct: 703 MIFSWDIFQED-KEEELATSREKLLDILFNYQAFTGEKMIVVFDGYKVKDNLGTIYSRKD 761
Query: 107 EFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKA 165
+++V+ ADA+IE+ + R+D + V +SD L Q+A + GA S++
Sbjct: 762 ----MEVVYTSSNLTADAYIERFVADHRKD--YDLTVASSDGLIQNAIFAQGAKRMSARE 815
Query: 166 LVSEVSLI 173
L ++ I
Sbjct: 816 LFGRITFI 823
>gi|379012697|ref|YP_005270509.1| hypothetical protein Awo_c28710 [Acetobacterium woodii DSM 1030]
gi|375303486|gb|AFA49620.1| hypothetical protein Awo_c28710 [Acetobacterium woodii DSM 1030]
Length = 164
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 47 VDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKE 106
+DGYNV L+ + +L+ AR KLI++L +S + + ++VFDA +E
Sbjct: 1 MDGYNVIHGSDDLK-RLSEIQLEEARIKLIDDLNGYSGFKGWETILVFDAYQQQSFEQRE 59
Query: 107 EFIG-VDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
F+G + +VF + AD++IEK + R V VVTSD Q +GA
Sbjct: 60 TFVGRIKVVFTEKNKTADSYIEK--LVYRLSNSLNVRVVTSDFALQQMVMASGA 111
>gi|291548412|emb|CBL21520.1| small GTP-binding protein domain [Ruminococcus sp. SR1/5]
Length = 1004
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDG N+ W L + + A+ +L++ L ++ I+ +++VFDA + G P
Sbjct: 833 LLVDGCNIIFAWEDLRD-LAQADFHAAQSRLMDILSDYQGIKGCILILVFDAYRVEGHPE 891
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
++ + +V+ E AD +IE+ + + V V TSD L+Q G GA S
Sbjct: 892 ETFQYHNIHVVYTKEAETADQYIERTVHKIGRK--HNVTVATSDGLEQIIIMGQGAARIS 949
Query: 163 SKALVSEVS 171
++ E++
Sbjct: 950 ARGFKDEIA 958
>gi|225181306|ref|ZP_03734751.1| protein of unknown function DUF901 [Dethiobacter alkaliphilus AHT
1]
gi|225168086|gb|EEG76892.1| protein of unknown function DUF901 [Dethiobacter alkaliphilus AHT
1]
Length = 170
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGL 101
VLLVDGYNV G W L + L+ AR KL L+ + R +++VVFDA +SG
Sbjct: 3 SVLLVDGYNVIGNWEDL-SALKSVSLEEARAKLCGILIRYLKFRWDRIIVVFDAYRVSGG 61
Query: 102 PTHKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
++F GET AD IE+ L G V V TSD L+Q GA
Sbjct: 62 KEKDPGDAPFAVIFSDEGET-ADVVIERLTAQLVAAGNV-VEVATSDALEQSLVLRLGAT 119
Query: 160 VWSSKAL 166
SS+ L
Sbjct: 120 RISSREL 126
>gi|342216006|ref|ZP_08708653.1| hypothetical protein HMPREF9130_1128 [Peptoniphilus sp. oral taxon
375 str. F0436]
gi|341586896|gb|EGS30296.1| hypothetical protein HMPREF9130_1128 [Peptoniphilus sp. oral taxon
375 str. F0436]
Length = 185
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
L VDGYN+ W + + + AR+KL++ LV+++ V++VFD + P
Sbjct: 20 LFVDGYNILNSWS-IFEREREEDFENARKKLMDILVDYAHYTGQAVILVFDGYKVKKNPG 78
Query: 104 HKEEFIGVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + G+ +VF AD +IE+E+ + V V TSD ++Q G S
Sbjct: 79 EEFHYKGIQVVFTKAMQTADHYIEQELTLI--GRHRNVRVATSDSMEQQMILSRGGKRIS 136
Query: 163 SKALVSEVS 171
++ L EV+
Sbjct: 137 ARELEVEVA 145
>gi|424513593|emb|CCO66215.1| unknown protein [Bathycoccus prasinos]
Length = 506
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 45/169 (26%)
Query: 46 LVDGYNVCG-------------------YWPKLENHF-IKGRLDVARQKLIEELVEFSMI 85
VDGYNVCG P L F ++G LD AR+ L E++ F++
Sbjct: 197 FVDGYNVCGVPDEDDAMMRVSGKSGSGGGIPHLRRRFLVEGDLDGARKILEEKVKAFAIS 256
Query: 86 REVKVVVVFD------------------ALMSGLP-THKEEFI--GVDIVFPGE-TCADA 123
R ++ V+V+D +G+ + E I GV +VF G AD
Sbjct: 257 RNMECVIVWDNNNYHTNNSGSSNSNSSSNSSTGMSEKERAEDIGDGVTVVFTGNGQLADG 316
Query: 124 WIEKE--IVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEV 170
+IE+E ++A +DG V+VVTSD+ + A A A V S E+
Sbjct: 317 YIERETKLLAEEKDG-KNVYVVTSDNAVRMAVSSAYARVIDSGNFCREI 364
>gi|139438526|ref|ZP_01772042.1| Hypothetical protein COLAER_01035 [Collinsella aerofaciens ATCC
25986]
gi|133776065|gb|EBA39885.1| hypothetical protein COLAER_01035 [Collinsella aerofaciens ATCC
25986]
Length = 225
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 22/149 (14%)
Query: 40 NAVPVLLVDGYNVCGYWPKLE--------NHFIKGRLDVARQKLIEELVEFSMIREVKVV 91
N +L+VDGYNV P+ E + + D+AR LI ++ F+ R + V
Sbjct: 49 NKPELLVVDGYNVIHCTPRYEKLVYDHSDDPYSSDVHDMARTALINDVAAFAQGR-YEAV 107
Query: 92 VVFDALMS------GLPTHKEEFIGVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVT 144
+VFD + LP GV I F P AD ++K + RE+G VV+
Sbjct: 108 IVFDGAGNISSERPNLPAR-----GVRIEFSPTGVSADTVVQKLCIEAREEG-RACSVVS 161
Query: 145 SDHLQQHAAYGAGAFVWSSKALVSEVSLI 173
SD Q G G SS+ LV E+ I
Sbjct: 162 SDGTIQAVVMGKGVTRISSRMLVDEIKQI 190
>gi|229815835|ref|ZP_04446159.1| hypothetical protein COLINT_02888 [Collinsella intestinalis DSM
13280]
gi|229808530|gb|EEP44308.1| hypothetical protein COLINT_02888 [Collinsella intestinalis DSM
13280]
Length = 229
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 44 VLLVDGYNVCGYWPKLEN-HFIKG----RLDV---ARQKLIEELVEFSMIREVKVVVVFD 95
+L+VDGYNV PK E F +G DV AR L+ ++ F+ R+ + VVVFD
Sbjct: 56 LLVVDGYNVIHATPKYERLMFDRGDHPYSSDVYERARTALVGDVAAFAG-RQYEAVVVFD 114
Query: 96 ALMSGLPTHKE-EFIGVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAA 153
A + P GV I F P AD I+ RE+G VVTSD + Q
Sbjct: 115 AAGNVSPDRPNLPQGGVRIEFSPTGVTADTVIQDLCTRAREEGR-ACSVVTSDAMIQATV 173
Query: 154 YGAGAFVWSSKALVSEV 170
G G S++ LV E+
Sbjct: 174 MGHGVTRVSARMLVEEI 190
>gi|189219720|ref|YP_001940361.1| PIN domain containing protein [Methylacidiphilum infernorum V4]
gi|189186578|gb|ACD83763.1| PIN domain containing protein [Methylacidiphilum infernorum V4]
Length = 150
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 40 NAVPVLLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALM 98
++ P+L++DGY+V W +L K R L AR+ LIE+L + +VVV+FD
Sbjct: 2 SSTPLLVIDGYSVIYAWDEL--RLAKRRSLSKARELLIEKLFVLHDLDIYQVVVIFDGSN 59
Query: 99 S---GLPTHKEEFIGVDIVF-PGETCADAWIEKEIVALREDGCPK--VWVVTSDHLQQHA 152
+P E+F ++F P T AD IE+ + + P+ V V+T+D ++
Sbjct: 60 PEPVSIPKVPEDFT---VIFSPRGTTADGLIERYVSS----SVPQRTVTVITADLEEKRQ 112
Query: 153 AYGAGAFVWSSKALVSEV 170
GAF S + L+ E+
Sbjct: 113 VESLGAFCMSPEWLMREI 130
>gi|329769075|ref|ZP_08260497.1| hypothetical protein HMPREF0433_00261 [Gemella sanguinis M325]
gi|328839566|gb|EGF89142.1| hypothetical protein HMPREF0433_00261 [Gemella sanguinis M325]
Length = 174
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
L +DGYN+ + E IK R LI+ L E++ V +FDA ++
Sbjct: 6 LFIDGYNLLFRMKEYE--LIKSSTFPAERDVLIDILKEYAGGNNYIVYCIFDAYLTRSKE 63
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +E + IV+ GE AD WIE++ LR D + VV+ DH ++ A G GA +
Sbjct: 64 YIKEEDPITIVYTKTGEK-ADQWIERKTRELRIDHFVDIIVVSDDHDERDATLGYGAILR 122
Query: 162 SSKALVSEVS 171
+ E+
Sbjct: 123 DCHMFIKELK 132
>gi|291532989|emb|CBL06102.1| Predicted RNA-binding protein containing a PIN domain [Megamonas
hypermegale ART12/1]
Length = 114
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
++VDGYN+ W L+ FI LD AR+KLI L+E+ + + +VFDA + +
Sbjct: 17 MVVDGYNIINAWESLKK-FINDDLDFAREKLIHLLMEYGQYEKYDITIVFDAQYTNAEEN 75
Query: 105 KEE 107
EE
Sbjct: 76 VEE 78
>gi|403743602|ref|ZP_10953154.1| hypothetical protein URH17368_0444 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122632|gb|EJY56837.1| hypothetical protein URH17368_0444 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 136
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 79 LVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVDIVFP--GETCADAWIEKEIVALREDG 136
L ++ I + VV+V+DA EE G+ IV+ GET ADA IE+ + +R+D
Sbjct: 5 LSQYRAIYDEDVVLVYDAHQRDGLGALEERSGIRIVYTDTGET-ADARIERLVYDMRDD- 62
Query: 137 CPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEVSLIIYY 176
++ V TSD +Q ++G GA S+ L+ + + Y
Sbjct: 63 YREITVATSDAAEQQVSFGGGALRISANELLRRIDRMQDY 102
>gi|335046638|ref|ZP_08539661.1| hypothetical protein HMPREF9124_0582 [Oribacterium sp. oral taxon
108 str. F0425]
gi|333760424|gb|EGL37981.1| hypothetical protein HMPREF9124_0582 [Oribacterium sp. oral taxon
108 str. F0425]
Length = 141
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+LLVDGYN + K L R+K+I+ L E+++ + +V ++FDA + G P
Sbjct: 1 MLLVDGYNFM-FAKDALKELAKEDLMAGREKVIQYLSEYAVFYDTEVYLIFDAYHVKGNP 59
Query: 103 THKEEF-IGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAY-GAGAF 159
K+ F ++++F E AD + K E G V +VTSD Q A+ G G
Sbjct: 60 GTKQRFGKNLELIFTKEGESADFTLTKMAKEFSEKGRA-VSIVTSDQAVQVQAFSGKGVS 118
Query: 160 VWSSK 164
+SS+
Sbjct: 119 RYSSR 123
>gi|343520315|ref|ZP_08757284.1| hypothetical protein HMPREF9127_0517 [Parvimonas sp. oral taxon 393
str. F0440]
gi|343397273|gb|EGV09807.1| hypothetical protein HMPREF9127_0517 [Parvimonas sp. oral taxon 393
str. F0440]
Length = 93
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 43 PVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP 102
++++DGYN+ W K + F+ + AR +LI ++ E+S + + +++VFDA
Sbjct: 5 KLIIIDGYNILNAWEKYK-PFLNLSFENARHELIYDMGEYSKLIGIDLLLVFDAYKINFK 63
Query: 103 THKEEFIGVDIVFPGET-CADAWIEK 127
E G+++V+ + AD +IEK
Sbjct: 64 GTSEVIKGIEVVYTKQNETADQYIEK 89
>gi|260892312|ref|YP_003238409.1| hypothetical protein Adeg_0406 [Ammonifex degensii KC4]
gi|260864453|gb|ACX51559.1| protein of unknown function DUF901 [Ammonifex degensii KC4]
Length = 158
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 46 LVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPTH 104
++DGYN+ Y ++E K L AR LIE L E++ + ++VVVFDA + G
Sbjct: 1 MIDGYNLI-YALEMEKE--KTDLAHARDYLIELLEEYAALTGKELVVVFDAYRVKGGQGS 57
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
+E GV ++F E AD IE+ L + V VVT D ++Q GAGA
Sbjct: 58 QETRRGVKVIFTKEKETADTVIERLAGELANEFL--VTVVTGDWMEQRLVVGAGAL 111
>gi|329767866|ref|ZP_08259380.1| hypothetical protein HMPREF0428_01077 [Gemella haemolysans M341]
gi|328838654|gb|EGF88253.1| hypothetical protein HMPREF0428_01077 [Gemella haemolysans M341]
Length = 174
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
L +DGYN+ + E IK R LI+ L E++ V +FDA ++
Sbjct: 6 LFIDGYNLL--FRMKEYDLIKSSTFPTERDILIDMLREYAGGNNYIVYCIFDAYLTRSKE 63
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +E + IV+ GE AD WIE++ LR D + VV+ DH ++ G GA +
Sbjct: 64 YIKEEPPITIVYTKTGER-ADQWIERKTRELRIDHFIDIIVVSDDHDERDTTLGYGAILR 122
Query: 162 SSKALVSEVS 171
+ E+
Sbjct: 123 DCHMFIKELK 132
>gi|302336401|ref|YP_003801608.1| hypothetical protein Olsu_1630 [Olsenella uli DSM 7084]
gi|301320241|gb|ADK68728.1| protein of unknown function DUF901 [Olsenella uli DSM 7084]
Length = 180
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDV----------ARQKLIEELVEFSMIREVKVVVV 93
+L+VDGYNV G P+ + H + D AR++L+ ++ F+ R VVV
Sbjct: 7 LLVVDGYNVMGASPRYQ-HLVDEGGDSRDLGTDPFVRARERLVTDVAAFAQGR-YDAVVV 64
Query: 94 FDA---LMSGLPTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQ 150
FD L PT + V+ GE+ ADA IE+ + R G V +VTSD+ +
Sbjct: 65 FDGANNLSDERPTCMCAGVTVEFSRQGES-ADALIERIVTDARRAG-RSVALVTSDNTVR 122
Query: 151 HAAYGAGAFVWSSKALVSEVSL 172
A G G SS LV E+ +
Sbjct: 123 -ATVGMGVARMSSDLLVHEMEV 143
>gi|225165013|ref|ZP_03727219.1| PIN domain containing protein [Diplosphaera colitermitum TAV2]
gi|224800385|gb|EEG18775.1| PIN domain containing protein [Diplosphaera colitermitum TAV2]
Length = 157
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA----LMSG 100
L++DG N+ WP+L + R D AR +LI+ L + +++ +VFD L+
Sbjct: 7 LIIDGSNILHAWPELRALLKRDR-DAARARLIDRLAPIHDLEAIRLTLVFDGRGPELVVE 65
Query: 101 LPTHKEEFIGVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAF 159
P F I++ P T AD IE+ + P +V +D + + A
Sbjct: 66 HPVGPASF---SIIYTPAGTTADDVIEQLVA---RSATPATCLVATDDQAERSTIEAAGA 119
Query: 160 VWSS 163
W S
Sbjct: 120 AWCS 123
>gi|241888750|ref|ZP_04776056.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
gi|241864426|gb|EER68802.1| conserved hypothetical protein [Gemella haemolysans ATCC 10379]
Length = 174
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L +DGYN+ + K N R LI+ L E++ V VFDA ++ +
Sbjct: 6 LFIDGYNLL-FRMKEYNLIKSSTFPTERDILIDMLREYAGGNNYIVYCVFDAYLTRAKEY 64
Query: 105 KEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+E + IV+ GE AD WIE++ LR D + VV+ D+ ++ G GA +
Sbjct: 65 IKEEPPISIVYTKTGER-ADQWIERKTRELRIDHFVDIIVVSDDNDERDTTLGYGAILRD 123
Query: 163 SKALVSEVS 171
+ E+
Sbjct: 124 CHMFIKELK 132
>gi|163119185|ref|YP_077383.2| hypothetical protein BL03272 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|145902688|gb|AAU21745.2| conserved hypothetical protein YacP [Bacillus licheniformis DSM 13
= ATCC 14580]
Length = 138
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 75 LIEELVEFSMIREVKVVVVFDA-LMSGLPTHKEEFIGVDIVFPGET-CADAWIEKEIVAL 132
+I+++ E+ +V+VVFDA L+ G+ K V+++F E AD IEK +V+
Sbjct: 1 MIQKMAEYQSYTGFRVIVVFDAHLVKGIEKKKVNH-RVEVIFTRENETADERIEK-LVSD 58
Query: 133 REDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEVSLI 173
++ V TSD+ +Q A +G GA S++ L+ EV I
Sbjct: 59 LNSIQTQIHVATSDYTEQWAIFGQGALRKSARELLREVEAI 99
>gi|346312105|ref|ZP_08854099.1| hypothetical protein HMPREF9452_01968 [Collinsella tanakaei YIT
12063]
gi|345899199|gb|EGX69050.1| hypothetical protein HMPREF9452_01968 [Collinsella tanakaei YIT
12063]
Length = 239
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 44 VLLVDGYNVCGYWPKLEN--------HFIKGRLDVARQKLIEELVEFSMIREVKVVVVFD 95
+L+VDGYN+ PK E + D AR LI ++ F+ + V+VFD
Sbjct: 64 LLVVDGYNIIHATPKYERLIYDRSDEPYTSDVFDSARMALIADVAAFAQ-GSYEAVIVFD 122
Query: 96 ALMSGLPTHKE-EFIGVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAA 153
+ P G+ I F P AD +++ RE+G VVTSD Q
Sbjct: 123 GAGNVSPDRPNISQAGIRIEFSPTGVSADTVVQQLCNEAREEGR-ACSVVTSDGTIQATV 181
Query: 154 YGAGAFVWSSKALVSEVSLI 173
G G S++ LV E+ I
Sbjct: 182 MGKGVTRISARMLVEEIDTI 201
>gi|456013247|gb|EMF46906.1| hypothetical protein B481_1487 [Planococcus halocryophilus Or1]
Length = 144
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 71 ARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPTHKEEFIGVDIVFPGET-CADAWIEKE 128
AR +LIE + E+ + +V++VFDA L+ G+ K V++++ E+ AD IEK
Sbjct: 4 ARDRLIERMAEYRSYKGWRVIIVFDAHLVPGIEA-KNLHHDVEVIYTKESETADERIEKL 62
Query: 129 IVAL--REDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSEVSLI 173
+ +L R D +++V TSD +Q +G GA S++ L E+ I
Sbjct: 63 VASLHTRRD---QIYVATSDLTEQWVIFGKGALRISARELEIEMDEI 106
>gi|257414072|ref|ZP_05591890.1| elongation factor G [Roseburia intestinalis L1-82]
gi|257201278|gb|EEU99562.1| elongation factor G [Roseburia intestinalis L1-82]
Length = 827
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
LLVDGYNV W +L N + +D AR +L++ L ++ +R +++VVFDA + G T
Sbjct: 747 LLVDGYNVIFAWDEL-NELARDNVDGARGRLLDILCDYQGMRGCELIVVFDAYRVQGHKT 805
Query: 104 HKEEFIGVDIVFPGE 118
++ + +V+ E
Sbjct: 806 EMYDYHNIHVVYTRE 820
>gi|209560081|ref|YP_002286553.1| hypothetical protein Spy49_1600c [Streptococcus pyogenes NZ131]
gi|386363431|ref|YP_006072762.1| hypothetical protein SPYALAB49_001639 [Streptococcus pyogenes
Alab49]
gi|209541282|gb|ACI61858.1| hypothetical protein Spy49_1600c [Streptococcus pyogenes NZ131]
gi|350277840|gb|AEQ25208.1| hypothetical protein SPYALAB49_001639 [Streptococcus pyogenes
Alab49]
Length = 160
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 52 VCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-LMSGLPTHKEEFIG 110
+ +W F +LD AR L+ +L ++ + ++ VFDA + GL +++
Sbjct: 1 MIAFWQSTRQLFKTNQLDQARNTLLTKLNHYAHFENINIICVFDAQYVPGLRQRYDQYY- 59
Query: 111 VDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVSE 169
+ +VF E AD++IE+ + A V V TSD +Q + GA +++ L
Sbjct: 60 ISVVFTEEDETADSYIER-MAAELNTAIHMVEVATSDLNEQWTIFSQGALRVTARELEQR 118
Query: 170 VSLI 173
V +
Sbjct: 119 VHTV 122
>gi|424868731|ref|ZP_18292466.1| uncharacterized protein [Leptospirillum sp. Group II 'C75']
gi|124515025|gb|EAY56536.1| conserved hypothetical protein [Leptospirillum rubarum]
gi|387221067|gb|EIJ75662.1| uncharacterized protein [Leptospirillum sp. Group II 'C75']
Length = 178
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 26/129 (20%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQK--LIEELVEFS--MIREVKVVVVFDALMS 99
++L+DGYNV G E F K R +AR++ LI L E+ + + ++ ++FD
Sbjct: 4 IVLIDGYNVIGS----EGRFRKDRDILARERENLIRRLSEYRSLLAPDTEIQLIFD---- 55
Query: 100 GLPTHKEEF----IGVDIVFP-GETCADAWIEKEIVALREDGCPKVWVVTSD-----HLQ 149
G P+ +E F GV +VF E ADA IV L E + VVTSD ++
Sbjct: 56 GFPSDREPFGHRGGGVTVVFSEEEGSADAV----IVRLSERWGNRAIVVTSDREVILRVR 111
Query: 150 QHAAYGAGA 158
Q A GA
Sbjct: 112 QSGAQAVGA 120
>gi|284030731|ref|YP_003380662.1| hypothetical protein Kfla_2798 [Kribbella flavida DSM 17836]
gi|283810024|gb|ADB31863.1| protein of unknown function DUF901 [Kribbella flavida DSM 17836]
Length = 435
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 45 LLVDGYNVCGY-WPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFD-ALMSGLP 102
L+VDGYNV WP H RQ+L+ L R V++ VVFD A +SG P
Sbjct: 314 LVVDGYNVTKTAWPNSPLHS-------QRQRLVTALGALVAQRRVEITVVFDGAELSG-P 365
Query: 103 THKEEFIGVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
GV + F P AD I +++V G P + VV+SD + GA
Sbjct: 366 VQLTPPRGVRVRFSPAGVIADEVI-RQLVRAEPPGRP-IVVVSSDREVADSIIQLGARAL 423
Query: 162 SSKALVSEVS 171
S+ +L++ ++
Sbjct: 424 SAVSLIARIA 433
>gi|171911964|ref|ZP_02927434.1| hypothetical protein VspiD_12330 [Verrucomicrobium spinosum DSM
4136]
Length = 146
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLEN-HFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL 97
D ++ ++VDG++V W +L H R +AR+ L++ L + + +VVVVFD +
Sbjct: 3 DTSLQFVIVDGHSVIHAWDELRRMHAAGARRYLAREALLKRLRLYQDMTGTRVVVVFDGV 62
Query: 98 MSGLPTHKEEFIGVDIVF--PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYG 155
+ + T + E G+ + + G T AD+ IE+ + + + V T+D +++
Sbjct: 63 GTKV-TDEREAAGLQVFYADAGRT-ADSVIERLVA--KYAATFAIRVATADQMERDTVES 118
Query: 156 AGAFVWSSKALVSEV 170
GA S + L EV
Sbjct: 119 FGAVCMSPEELRYEV 133
>gi|108804990|ref|YP_644927.1| hypothetical protein Rxyl_2171 [Rubrobacter xylanophilus DSM 9941]
gi|108766233|gb|ABG05115.1| protein of unknown function DUF901 [Rubrobacter xylanophilus DSM
9941]
Length = 169
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L++DGYN+ G + G LD +R++L+ + ++ + +V+VVFDA S P
Sbjct: 5 LILDGYNLIGALERYGTGKTGG-LDESRERLVNDALKAAGWTGRRVIVVFDAHGSPEPER 63
Query: 105 KEEFIG--VDIVF--PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
+E G V +VF PG++ AD IE+ + L E+G V+ T D Q GA
Sbjct: 64 EEVRAGGAVRLVFSGPGQS-ADDVIERLLSRL-EEGSATVY--TGDFALQRTVLARGA 117
>gi|410479616|ref|YP_006767253.1| hypothetical protein LFML04_2097 [Leptospirillum ferriphilum ML-04]
gi|206603840|gb|EDZ40320.1| Conserved protein of unknown function [Leptospirillum sp. Group II
'5-way CG']
gi|406774868|gb|AFS54293.1| hypothetical protein LFML04_2097 [Leptospirillum ferriphilum ML-04]
Length = 176
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 26/129 (20%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQK--LIEELVEFS--MIREVKVVVVFDALMS 99
++L+DGYNV G E F K R +AR++ LI L E+ + + ++ ++FD
Sbjct: 4 IVLIDGYNVIGS----EGRFRKDRDILARERENLIRRLSEYRSLLAPDTEIQLIFD---- 55
Query: 100 GLPTHKEEFI----GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSD-----HLQ 149
G P+ ++ F GV ++F E ADA IV L E + VVTSD ++
Sbjct: 56 GFPSDRDPFRHRGGGVTVLFSEEEGSADAV----IVRLSERFGNRAIVVTSDREVILRVR 111
Query: 150 QHAAYGAGA 158
Q A GA
Sbjct: 112 QSGAQAVGA 120
>gi|363896431|ref|ZP_09322982.1| hypothetical protein HMPREF9624_01726 [Oribacterium sp. ACB7]
gi|361960717|gb|EHL13950.1| hypothetical protein HMPREF9624_01726 [Oribacterium sp. ACB7]
Length = 888
Score = 43.1 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+LLVDGYN L+ K L R+K+I+ L E+++ + +V ++FDA + G P
Sbjct: 748 LLLVDGYNFMFAKDALK-ELAKEDLMAGREKVIQYLSEYAVFYDTEVYLIFDAYHVKGNP 806
Query: 103 THKEEF-IGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAY-GAGAF 159
K+ F ++++F E AD + K E G V +VTSD Q A+ G G
Sbjct: 807 GTKQRFGKNLELIFTKEGESADFTLTKMAKEFSEKG-RAVSIVTSDQAVQVQAFSGKGVS 865
Query: 160 VWSSK 164
+SS+
Sbjct: 866 RYSSR 870
>gi|358067314|ref|ZP_09153795.1| hypothetical protein HMPREF9333_00676 [Johnsonella ignava ATCC
51276]
gi|356694486|gb|EHI56146.1| hypothetical protein HMPREF9333_00676 [Johnsonella ignava ATCC
51276]
Length = 883
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLPT 103
+++DGYN+ + K L AR+KL + LV + +++VFDA + G T
Sbjct: 716 IIIDGYNLI-FASKELGALADYNLGAAREKLKDMLVNYRGYVRADIILVFDAYKVEGNYT 774
Query: 104 HKEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWS 162
+ + +V+ E AD +IE+ + + + V VVTSD+ +Q G + S
Sbjct: 775 QINNYSNIYVVYTQEAETADHYIERTVHEMSDK--YNVCVVTSDYTEQIIIRSKGCRLMS 832
Query: 163 SKALVSEV 170
S+ + ++
Sbjct: 833 SREFIEDM 840
>gi|317495870|ref|ZP_07954233.1| hypothetical protein HMPREF0432_00836 [Gemella morbillorum M424]
gi|316914047|gb|EFV35530.1| hypothetical protein HMPREF0432_00836 [Gemella morbillorum M424]
Length = 174
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGR-LDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
L +DGYN+ + E IK R LI+ L E++ V +FDA ++
Sbjct: 6 LFIDGYNLL--FRMKEYGLIKSSTFPAERDMLIDILREYAGGNNYIVYCIFDAYLTRSKE 63
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ +E + IV+ GE AD WIEK+ LR + + VV+ D+ ++ A G GA +
Sbjct: 64 YIKEEPPITIVYTKTGEK-ADQWIEKKTKELRIEHFIDIIVVSDDNDERDMALGYGAILR 122
Query: 162 SSKALVSEVS 171
+ E+
Sbjct: 123 DCHRFIKELK 132
>gi|116328285|ref|YP_798005.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331011|ref|YP_800729.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|116121029|gb|ABJ79072.1| RNA-binding protein containing a PIN domain [Leptospira
borgpetersenii serovar Hardjo-bovis str. L550]
gi|116124700|gb|ABJ75971.1| RNA-binding protein containing a PIN domain [Leptospira
borgpetersenii serovar Hardjo-bovis str. JB197]
Length = 165
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVV-VVFDALMS-GLP 102
+++DG+N+ +P LE + ++ RL ARQ L+E + +S ++ ++ V FD G
Sbjct: 5 VVIDGFNLIYKFPDLEEYMVRNRLLEARQGLLERIESYSQKKKEQIFHVFFDGKKEVGSA 64
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCP-KVWVVTSD 146
+E F +++ F AD I KE V R + P ++ VV+SD
Sbjct: 65 IFQETFGKLNVYFSHGRKADDVI-KEFV--RTNARPSEIEVVSSD 106
>gi|116627049|ref|YP_819668.1| RNA-binding protein [Streptococcus thermophilus LMD-9]
gi|387908891|ref|YP_006339197.1| RNA-binding protein containing a PIN domain [Streptococcus
thermophilus MN-ZLW-002]
gi|116100326|gb|ABJ65472.1| Predicted RNA-binding protein containing a PIN domain
[Streptococcus thermophilus LMD-9]
gi|387573826|gb|AFJ82532.1| putative RNA-binding protein containing a PIN domain [Streptococcus
thermophilus MN-ZLW-002]
Length = 159
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 52 VCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEF--I 109
+ +W + F +LD AR+ L+ +L ++ + ++ VFDA +P +++ +
Sbjct: 1 MIAFWKETRQLFKINQLDEARETLLRKLNHYANFEHIDIICVFDAQF--VPGNRQRYDQY 58
Query: 110 GVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSKALVS 168
V ++F E AD++IE+ + V V TSD +Q + GA S++ L
Sbjct: 59 RVSVIFTEEDETADSYIERSAAEMNTIQNL-VEVATSDLNEQWGIFSQGALRVSARELEE 117
Query: 169 EVSLI 173
V+ +
Sbjct: 118 RVNTV 122
>gi|163845753|ref|YP_001633797.1| hypothetical protein Caur_0154 [Chloroflexus aurantiacus J-10-fl]
gi|222523461|ref|YP_002567931.1| hypothetical protein Chy400_0166 [Chloroflexus sp. Y-400-fl]
gi|163667042|gb|ABY33408.1| conserved hypothetical protein [Chloroflexus aurantiacus J-10-fl]
gi|222447340|gb|ACM51606.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
Length = 164
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEF-SMIREVKVVVVFDALMSGLPT 103
+L+DG+N+ G P +E + D A KL+ +L + + R K+VVVFD + G P
Sbjct: 3 ILIDGHNLIGQMPDIE---LSDPDDEA--KLVAKLRRYVAKKRGRKIVVVFDGGVYGHPQ 57
Query: 104 HKEEFIGVDIVF--PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
+ F GV+ F P + AD + ++I A+R C + VV+SD A G V
Sbjct: 58 NLNGF-GVETRFVKPPQN-ADHELIRQIRAIRR--CDEWLVVSSDRAVVGEAQARGIRVM 113
Query: 162 SSKALVSEVSLI 173
S++ + ++
Sbjct: 114 SAQEFARRLQML 125
>gi|328955959|ref|YP_004373292.1| hypothetical protein Corgl_1376 [Coriobacterium glomerans PW2]
gi|328456283|gb|AEB07477.1| protein of unknown function DUF901 [Coriobacterium glomerans PW2]
Length = 181
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 44 VLLVDGYNVCGYWPK--------LENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFD 95
+L+VDGYNV P+ ++ + D +R LI ++ F+ R ++VFD
Sbjct: 7 LLVVDGYNVIHATPRYRRLVFDHADDPYSSDVHDGSRMALIADVAAFAQGR-YDAIIVFD 65
Query: 96 ALMSGLPTHKEEFI--GVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHA 152
+ + + I GV I F P AD +++ + R+ G VVTSD Q
Sbjct: 66 G-AGNVSAARPDLIEAGVRIEFSPTGVSADTVVQRLCIEARDAG-RACSVVTSDAAIQTT 123
Query: 153 AYGAGAFVWSSKALVSEVSLI 173
G G S++ LV E+ I
Sbjct: 124 VMGKGVTRISARMLVDEIREI 144
>gi|417962118|ref|ZP_12604394.1| hypothetical protein SFB2_265G0, partial [Candidatus Arthromitus
sp. SFB-2]
gi|380331103|gb|EIA22206.1| hypothetical protein SFB2_265G0, partial [Candidatus Arthromitus
sp. SFB-2]
Length = 97
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 42 VPVLLVDGYNVCGYWPKLENHFIKGRLD--VARQKLIEELVEFSMIREVKVVVVFDALMS 99
+ ++ VD YNV WP +N LD + R+KLI + +++ +V ++FDA S
Sbjct: 1 MKIIFVDAYNVINSWPNFKN---SRDLDFSIVREKLISMVESYALFNGYRVFLIFDAYNS 57
Query: 100 GLPTHKEEFI--GVDIVFPG-ETCADAWIEK 127
++ I + I++ + AD +IE+
Sbjct: 58 DSTNERKIDISDNLSIIYTNKDEFADTYIER 88
>gi|256826827|ref|YP_003150786.1| RNA-binding protein containing a PIN domain protein
[Cryptobacterium curtum DSM 15641]
gi|256582970|gb|ACU94104.1| predicted RNA-binding protein containing a PIN domain protein
[Cryptobacterium curtum DSM 15641]
Length = 179
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 44 VLLVDGYNVCGYWPKLEN-----HFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDA-- 96
+L+VDGYNV + + + + R+ LI +++ + +VFD
Sbjct: 7 LLIVDGYNVLRSGSRYRHMRAMADYTDEVYNKCREALINDVIAHMGRDYCEAYLVFDGRD 66
Query: 97 --LMSGLPTHKEEFIGVDIVF-PGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAA 153
+G+P E GV +VF P AD IEK R G +V VVTSD Q
Sbjct: 67 NEFSTGVP---ERIGGVQVVFSPAGLSADTVIEKLAFDARSRGV-EVMVVTSDATIQDTV 122
Query: 154 YGAGAFVWSSKALVSEVSLI 173
+G G S+ E L+
Sbjct: 123 FGLGVDRMSADGFSREAELL 142
>gi|119492071|ref|ZP_01623524.1| hypothetical protein L8106_03197 [Lyngbya sp. PCC 8106]
gi|119453281|gb|EAW34446.1| hypothetical protein L8106_03197 [Lyngbya sp. PCC 8106]
Length = 167
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Query: 52 VCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEF--- 108
+ G WP L ++ AR+ L+E LV +S + VVFDA P+ E
Sbjct: 1 MIGVWPLLRTKQEGEGMEEARRTLVETLVNYSAFEGLDARVVFDAHYQNTPSVVETVTRN 60
Query: 109 IGVDIVFPGETCADAWIEKEIVALRED---GCPKVWVVTSDHLQQHAAYGAGAFVWSSKA 165
+ V G+T AD +IEK L ++ V TSD Q G GA S+
Sbjct: 61 VSVHYTDYGQT-ADTYIEKICATLAHQLRLSRRRLIVATSDRAHQLTVIGYGAEWMSALQ 119
Query: 166 LVSEV 170
L +V
Sbjct: 120 LAHDV 124
>gi|300784118|ref|YP_003764409.1| hypothetical protein AMED_2207 [Amycolatopsis mediterranei U32]
gi|384147379|ref|YP_005530195.1| hypothetical protein RAM_11240 [Amycolatopsis mediterranei S699]
gi|399536003|ref|YP_006548665.1| hypothetical protein AMES_2184 [Amycolatopsis mediterranei S699]
gi|299793632|gb|ADJ44007.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340525533|gb|AEK40738.1| hypothetical protein RAM_11240 [Amycolatopsis mediterranei S699]
gi|398316773|gb|AFO75720.1| hypothetical protein AMES_2184 [Amycolatopsis mediterranei S699]
Length = 465
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Query: 45 LLVDGYNVC--GYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFD-ALMSGL 101
L+VDGYNV GY P+L L R +LI +L + +V VVFD A + +
Sbjct: 345 LIVDGYNVTKTGY-PELA-------LADQRDRLIHQLSALAARTSAEVTVVFDGAGVLSV 396
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
P GV ++F + + +VA G P V V TSD + G GA
Sbjct: 397 PASVPR--GVRVLFSDRGVLADDVIRNLVAAEPAGRPMV-VATSDRAVADSVRGRGAHPT 453
Query: 162 SSKALVSEVSLI 173
S LVS +S +
Sbjct: 454 PSSVLVSRLSRV 465
>gi|257784981|ref|YP_003180198.1| hypothetical protein Apar_1179 [Atopobium parvulum DSM 20469]
gi|257473488|gb|ACV51607.1| protein of unknown function DUF901 [Atopobium parvulum DSM 20469]
Length = 192
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 26/151 (17%)
Query: 44 VLLVDGYNVCGYWPKLEN------------------HFIKGRLDVARQKLIEELVEFSMI 85
+L+VDGYNV P+ E H AR LI ++ F+
Sbjct: 7 LLVVDGYNVMLATPRYEALLNERGSFAQETAAERAYHLNSDPFYRARLALISDVATFAQ- 65
Query: 86 REVKVVVVFDALMSGLPTHKEE-FIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWV 142
+ V+VFD + E GV +VF GE+ AD+ IE+ + RE G KV++
Sbjct: 66 GAYEAVIVFDGKGNVNDERPERSHAGVQLVFSETGES-ADSVIERLVTEAREAG-RKVFL 123
Query: 143 VTSDH-LQQHAAYGAGAFVW-SSKALVSEVS 171
VTSD ++ A +G G +S +LV E+S
Sbjct: 124 VTSDRDIRATAGFGPGEVTRIASASLVHEIS 154
>gi|91201690|emb|CAJ74750.1| hypothetical protein kuste3987 [Candidatus Kuenenia
stuttgartiensis]
Length = 226
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 57/132 (43%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
++++DGYN+ P+LE H + ++ R +I L ++ + ++VVFD S
Sbjct: 2 LIIIDGYNLIFSVPELEKHVERNFIEAVRDYVISFLSQYRQEKHYDIIVVFDGTYSETSL 61
Query: 104 HKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSS 163
+ G + +T A E +A V +VT D+ + G +
Sbjct: 62 PRRLVSGGIKIIYSKTGVKADTEIMNIASHVKNPKDVCIVTYDNEIKRHVKKCGCRILDP 121
Query: 164 KALVSEVSLIIY 175
K+L E+ +++
Sbjct: 122 KSLYREIYDVLF 133
>gi|418738569|ref|ZP_13294963.1| YacP-like NYN domain protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410745790|gb|EKQ98699.1| YacP-like NYN domain protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 165
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVV-VVFDALMS-GLP 102
+++DG+N+ +P LE + ++ RL ARQ L+E + +S ++ + V FD G
Sbjct: 5 VVIDGFNLIYKFPDLEEYMVRNRLLEARQGLLERIESYSQKKKEQTFHVFFDGKKEIGNA 64
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCP-KVWVVTSD 146
+E F +++ F AD I KE V R + P ++ VV+SD
Sbjct: 65 IFQETFGKLNVYFSHGRKADDVI-KEFV--RTNVRPSEIEVVSSD 106
>gi|359689686|ref|ZP_09259687.1| hypothetical protein LlicsVM_14912 [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749805|ref|ZP_13306093.1| YacP-like NYN domain protein [Leptospira licerasiae str. MMD4847]
gi|418759057|ref|ZP_13315237.1| YacP-like NYN domain protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384113548|gb|EID99812.1| YacP-like NYN domain protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404274690|gb|EJZ42008.1| YacP-like NYN domain protein [Leptospira licerasiae str. MMD4847]
Length = 180
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSM-IREVKVVVVFDALM-SGLP 102
L+VDG+N+ P+LE + RL AR L+ L +S ++ KV V FD G
Sbjct: 20 LVVDGFNLIYKIPELEEYMYSNRLRDARVGLLRILESYSAKLKSSKVHVFFDGKKEKGNE 79
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPK---VWVVTSDH 147
T ++ + + + F + AD I KE + P+ ++VVTSD
Sbjct: 80 TKEDSYGKIRVYFSQDRKADDLI-KEYIKF----APRPADLFVVTSDQ 122
>gi|85860498|ref|YP_462700.1| cytoplasmic protein [Syntrophus aciditrophicus SB]
gi|85723589|gb|ABC78532.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
Length = 179
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLP-T 103
+++DGYN+ L HF + L+ RQ L+ ++ + + ++ VVFD +G P
Sbjct: 3 IIIDGYNLIRQSDFL-RHFERRSLEAGRQALLSQVSSYRKSKGHRITVVFDGWENGSPFE 61
Query: 104 HKEEFIGVDIVFP--GETCADAWIEKEIVALREDGCPKVWVVTSDH 147
++ G+ +V+ GE AD I++ ++ E+ + VVTSD
Sbjct: 62 ERDRQGGITVVYSRRGEK-ADEVIKRMVLQKGEE----IVVVTSDR 102
>gi|421095777|ref|ZP_15556486.1| YacP-like NYN domain protein [Leptospira borgpetersenii str.
200801926]
gi|410361388|gb|EKP12432.1| YacP-like NYN domain protein [Leptospira borgpetersenii str.
200801926]
Length = 165
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVV-VVFDALMS-GLP 102
+++DG+N+ +P LE + ++ RL ARQ L+E + +S ++ + V FD G
Sbjct: 5 VVIDGFNLIYKFPDLEEYMVRNRLLEARQGLLERIESYSQKKKEQTFHVFFDGKKEIGNE 64
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCP-KVWVVTSD 146
+E F +++ F AD I KE V R + P ++ VV+SD
Sbjct: 65 IFQETFGKLNVYFSHGRKADDVI-KEFV--RTNVRPSEIEVVSSD 106
>gi|221194471|ref|ZP_03567528.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
gi|221185375|gb|EEE17765.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
Length = 195
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 27/151 (17%)
Query: 44 VLLVDGYNVCGYWPKLEN-------------------HFIKGRLDVARQKLIEELVEFSM 84
+L+VDGYNV + E H AR+ LI ++ F+
Sbjct: 9 LLIVDGYNVMHATARYEGLIDGANQADGLVSSADAAYHMDGDPFIRAREALISDVATFAH 68
Query: 85 IREVKVVVVFDALMSGLPTHKEEF-IGVDIVF--PGETCADAWIEKEIVALREDGCPKVW 141
R K V+VFD + P + GV ++F P ++ AD IEK + RE G V
Sbjct: 69 HR-YKAVIVFDGAGNVNPERPDRSRAGVKLIFSKPNQS-ADTVIEKLVTEAREAG-RSVS 125
Query: 142 VVTSDH-LQQHAAYGAGAFVW-SSKALVSEV 170
+VTSD ++ +G G SS ALV +V
Sbjct: 126 LVTSDKDVRSTVGFGPGEVTRISSAALVRDV 156
>gi|336320548|ref|YP_004600516.1| hypothetical protein Celgi_1429 [[Cellvibrio] gilvus ATCC 13127]
gi|336104129|gb|AEI11948.1| protein of unknown function DUF901 [[Cellvibrio] gilvus ATCC 13127]
Length = 455
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
L+VDGYNV ++ F L++ R+ L++ L + +V FD S +PT
Sbjct: 336 LVVDGYNVT------KSAFGGLTLELQRRHLVDGLASLAARTGAEVTCCFDGRPSPMPTA 389
Query: 105 KEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVWSSK 164
GV + F AD I + + A E V VVTSD H GA+V S
Sbjct: 390 SLAR-GVRVRFSVGEIADDLIRRLVRA--EPAGRVVVVVTSDQEVTHDVEADGAYVVPSA 446
Query: 165 ALV 167
LV
Sbjct: 447 TLV 449
>gi|418718330|ref|ZP_13277866.1| YacP-like NYN domain protein [Leptospira borgpetersenii str. UI
09149]
gi|410744939|gb|EKQ93672.1| YacP-like NYN domain protein [Leptospira borgpetersenii str. UI
09149]
Length = 165
Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVV-VVFDALMS-GLP 102
+++DG+N+ +P LE + ++ RL ARQ L+E + +S ++ + + FD G
Sbjct: 5 VVIDGFNLIYKFPDLEEYMVRNRLLEARQGLLERIESYSQKKKEQTFHIFFDGKKEIGNA 64
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCP-KVWVVTSD 146
+E F +++ F AD I KE V R + P ++ VV+SD
Sbjct: 65 IFQETFGKLNVYFSHGRKADDVI-KEFV--RTNVRPSEIEVVSSD 106
>gi|77551262|gb|ABA94059.1| SWIM zinc finger family protein [Oryza sativa Japonica Group]
Length = 844
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 19/118 (16%)
Query: 4 PSTSYRRKKVEKEELPEDTELYRFFSYIYNTNQGIDNAVPVLLVDGYNVCGYW------- 56
P +SY KK E P + L R F ++ + N PVL +DG + G +
Sbjct: 296 PGSSYTVKKFPSIEHPSKSVLQRAFLALHACKMALVNCRPVLCIDGTFLTGKYFRDRFQA 355
Query: 57 --PKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTHKEEFIGVD 112
P + N+ I R + QK +EEL + +M AL+ G HK E + D
Sbjct: 356 VLPSMPNNSILFRTFM--QKKLEELRKKAMKHR--------ALVQGTQQHKFEILCQD 403
>gi|194337869|ref|YP_002019663.1| hypothetical protein Ppha_2903 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310346|gb|ACF45046.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 176
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPTH 104
+L+DGYN+ KL LDV R++ +L+ F E + VV+D G P
Sbjct: 8 ILIDGYNLIH---KLHPSLTSASLDVLRKETETQLLCFQQKTECPITVVYDG--KGSPRE 62
Query: 105 KEEFIGVDIVFPGET-CADAWIEKEIVALREDGCPKVWVVTS-DHLQQHA-AYGA 156
+ IVF + AD WI + +L KV +V+S D ++++A A+GA
Sbjct: 63 SACGAPLHIVFTSASKSADHWIIDYVKSL-NTRVKKVTIVSSDDEIRRYATAFGA 116
>gi|386811542|ref|ZP_10098767.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403812|dbj|GAB61648.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 225
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSG--L 101
++++DGYN P+LE + ++ R +I L ++ + ++++VFD + L
Sbjct: 2 LIIIDGYNFIFTVPELEKYVEGNHIEPVRNYVISLLSKYKEKKHYEIIIVFDGNCTEVIL 61
Query: 102 PTHKEEFIGVDIVFPGETC-ADAWIEKEIVALREDGCPK-VWVVTSDHLQQHAAYGAGAF 159
P K+ + G+ +V+ AD I K I +L ++ PK V +VT D+ + G
Sbjct: 62 PK-KQTYSGITVVYSKSGINADTEI-KNITSLCQN--PKDVRIVTYDNDIKRHVKKCGCQ 117
Query: 160 VWSSKALVSEVSLIIYYT 177
+ K E+ II T
Sbjct: 118 IIEPKIFYKEILEIINKT 135
>gi|398347168|ref|ZP_10531871.1| hypothetical protein Lbro5_08084 [Leptospira broomii str. 5399]
Length = 180
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEF-SMIREVKVVVVFDALM-SGLP 102
L+VDG+N+ +P+LE RL AR L+ L + S I+ + V FD G
Sbjct: 20 LVVDGFNLIYKFPELEAFMYSDRLREARVGLLRILEAYSSKIKNPNIHVFFDGKKEKGSE 79
Query: 103 THKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPK---VWVVTSDH 147
K+ + + + F E AD I+ I P+ +++VTSD
Sbjct: 80 VRKDAYGNIQVYFSQELKADDLIKDYIKY-----SPRPSELFIVTSDQ 122
>gi|363899880|ref|ZP_09326387.1| hypothetical protein HMPREF9625_01047 [Oribacterium sp. ACB1]
gi|395210156|ref|ZP_10399076.1| YacP-like NYN domain protein [Oribacterium sp. ACB8]
gi|361957543|gb|EHL10851.1| hypothetical protein HMPREF9625_01047 [Oribacterium sp. ACB1]
gi|394704446|gb|EJF11984.1| YacP-like NYN domain protein [Oribacterium sp. ACB8]
Length = 928
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDAL-MSGLP 102
+LLVDGYN L+ L R+K+++ L E+++ + +V ++FDA + G
Sbjct: 787 ILLVDGYNFMFAKNDLK-ELATEDLMAGREKVVQLLSEYAVFYDKEVYLIFDAYHVKGNQ 845
Query: 103 THKEEF-IGVDIVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAY-GAGAF 159
+++F ++++F E AD + K E G +V VVTSD Q A+ G G
Sbjct: 846 GSRKQFGKNLELIFTKEGESADFTLTKLAKDFSEKG-RRVSVVTSDQAVQVQAFSGKGVS 904
Query: 160 VWSSK 164
+SS+
Sbjct: 905 RYSSR 909
>gi|255019113|ref|ZP_05291239.1| hypothetical protein LmonF_17681 [Listeria monocytogenes FSL
F2-515]
Length = 34
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
Query: 44 VLLVDGYNVCGYWPKLENHFIKGR-LDVARQKL 75
+LLVDGYNV G WP+L ++K R L+ AR KL
Sbjct: 4 ILLVDGYNVIGAWPELS--YLKDRDLEAARDKL 34
>gi|257055124|ref|YP_003132956.1| putative RNA-binding protein containing a PIN domain-containing
protein [Saccharomonospora viridis DSM 43017]
gi|256584996|gb|ACU96129.1| predicted RNA-binding protein containing a PIN domain protein
[Saccharomonospora viridis DSM 43017]
Length = 470
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 45 LLVDGYNVC--GYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFD-ALMSGL 101
L+VDGYNV GY P+L L RQ+L+ EL + ++ VVFD A ++ +
Sbjct: 350 LIVDGYNVTKTGY-PELS-------LVEQRQRLVRELGALASRTGAEITVVFDGADVTSI 401
Query: 102 PTHKEEFIGVDIVFPGETCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGAFVW 161
P + V PG AD I + +V G P V V TSD ++ AG++
Sbjct: 402 PAAGARNVRVLFSDPG-VLADDVI-RSLVLAEPQGRPLV-VATSDQAVVNSVCAAGSYAI 458
Query: 162 SSKALVSEVSLI 173
+ L++ + +
Sbjct: 459 PAAVLLARLGRV 470
>gi|114562607|ref|YP_750120.1| phosphotransferase domain-containing protein [Shewanella
frigidimarina NCIMB 400]
gi|114333900|gb|ABI71282.1| PHP C-terminal domain protein [Shewanella frigidimarina NCIMB 400]
Length = 286
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 39 DNAVPVLLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKV 90
++A P+LL++G + W + H + LD+A L+E L +REV+
Sbjct: 58 NHATPLLLINGCEISTRWNSFDIHIVGLNLDIAHTGLLEFLTHQRELREVRA 109
>gi|456890038|gb|EMG00896.1| YacP-like NYN domain protein [Leptospira borgpetersenii str.
200701203]
Length = 72
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 45 LLVDGYNVCGYWPKLENHFIKGRLDVARQKLIEELVEFSMIREVKVVVVF 94
+++DG+N+ +P LE + ++ RL ARQ L+E + +S ++ + VF
Sbjct: 5 VVIDGFNLIYKFPDLEEYMVRNRLLEARQGLLERIESYSQKKKEQTFHVF 54
>gi|227872867|ref|ZP_03991175.1| conserved hypothetical protein, partial [Oribacterium sinus F0268]
gi|227841287|gb|EEJ51609.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 462
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 45 LLVDGYNVCGYWPKLE-NHFIKGRLDVARQKLIEELVEFSMIREVKVVVVFDALMSGLPT 103
LVDGYN + K E + L R++++ L E++ +V + ++FDA + +
Sbjct: 324 FLVDGYNFL--FAKDEWKALAQTDLMAGREQILPLLSEYAAYHDVDLYLIFDAYR--VKS 379
Query: 104 HKEEFIGVD----IVFPGE-TCADAWIEKEIVALREDGCPKVWVVTSDHLQQHAAYGAGA 158
+ + + +D ++F E AD + K + G P V V + +Q G GA
Sbjct: 380 NPGKTLQLDSRMQVIFTKEGESADFALSKMANDFSQSGYPVVVVSSDQAVQIQGFSGKGA 439
Query: 159 FVWSSKALVSEV 170
V+SSK +V
Sbjct: 440 IVYSSKEFALQV 451
>gi|41469628|gb|AAS07351.1| expressed protein (with alternative splicing) [Oryza sativa
Japonica Group]
Length = 99
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 2 PRPSTSYRRKKVEKEELPEDTELY 25
P+P+T YR+KKV KE LP+DT+ Y
Sbjct: 68 PQPATRYRKKKVIKEVLPDDTDFY 91
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,989,263,148
Number of Sequences: 23463169
Number of extensions: 122339267
Number of successful extensions: 236826
Number of sequences better than 100.0: 797
Number of HSP's better than 100.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 481
Number of HSP's that attempted gapping in prelim test: 235774
Number of HSP's gapped (non-prelim): 806
length of query: 179
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 46
effective length of database: 9,238,593,890
effective search space: 424975318940
effective search space used: 424975318940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)