Your job contains 1 sequence.
>039225
LNLSFFLIFLDSHNFSCDCSLTEMVMEIDSSNPNGEDGVNKINGHDHDSDRRHMAIIEPH
SELPKPEAPAGLFALPPSPSSSPPSGNYSFKFGKFIRERSNNFSAAIVKKLNSLDDARAE
AEPEPAASTVIKPDEVTQFNISGLKVVVKLKSHGEEGEEKIKGRISFFSRSNCRDCTAVR
RFFKQRGLKFVEINVDVFPPREKELIRRTGSSQVPQVFLNDKLFGGLVALNSLRNSGTFD
ERFREMLGRKCSGDAPAPPLYGFDDDDEEEESMDEMLLSVKLLRQRLPIQDRLIKLKIVK
NCFSGSEMVDVLTHHFKCDRMKVRFVL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039225
(327 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081516 - symbol:AT3G11920 species:3702 "Arabi... 559 2.6e-61 2
TAIR|locus:2133524 - symbol:AT4G08550 species:3702 "Arabi... 258 2.9e-21 1
UNIPROTKB|P0AC62 - symbol:grxC "reduced glutaredoxin 3" s... 108 1.1e-05 1
UNIPROTKB|P0AC65 - symbol:nrdH "glutaredoxin-like protein... 103 3.9e-05 1
WB|WBGene00022663 - symbol:glrx-21 species:6239 "Caenorha... 101 6.4e-05 1
UNIPROTKB|P73492 - symbol:ssr2061 "Probable glutaredoxin ... 99 0.00011 1
WB|WBGene00012869 - symbol:Y45F10A.7 species:6239 "Caenor... 119 0.00024 1
POMBASE|SPAC15E1.09 - symbol:grx2 "glutaredoxin Grx2" spe... 93 0.00048 1
>TAIR|locus:2081516 [details] [associations]
symbol:AT3G11920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009055 "electron carrier
activity" evidence=IEA] [GO:0015035 "protein disulfide
oxidoreductase activity" evidence=IEA] [GO:0035556 "intracellular
signal transduction" evidence=IEA] [GO:0045454 "cell redox
homeostasis" evidence=IEA] [GO:0048653 "anther development"
evidence=RCA] InterPro:IPR000591 InterPro:IPR002109 Pfam:PF00462
Pfam:PF00610 PROSITE:PS50186 PROSITE:PS51354 SMART:SM00049
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0035556 GO:GO:0009055
EMBL:AP002040 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0045454
GO:GO:0015035 EMBL:AC016795 HSSP:P37687 InterPro:IPR006869
Pfam:PF04784 eggNOG:NOG278779 IPI:IPI00528711 RefSeq:NP_566405.1
UniGene:At.53273 ProteinModelPortal:Q9SF07 SMR:Q9SF07 PaxDb:Q9SF07
PRIDE:Q9SF07 EnsemblPlants:AT3G11920.1 GeneID:820365
KEGG:ath:AT3G11920 TAIR:At3g11920 HOGENOM:HOG000084276
InParanoid:Q9SF07 OMA:VKNCFSG PhylomeDB:Q9SF07
ProtClustDB:CLSN2688279 Genevestigator:Q9SF07 Uniprot:Q9SF07
Length = 630
Score = 559 (201.8 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 111/192 (57%), Positives = 139/192 (72%)
Query: 134 DEVTQFNISGLKVVVKLKSHXXXXXXKIKGRISFFSRSNCRDCTAVRRFFKQRGLKFVEI 193
D+VT+F ISG+KV+VK+K+ +IKGRI+FFSRSNCRD TAVR F ++RG F EI
Sbjct: 133 DDVTEFKISGVKVLVKMKNEE-----EIKGRITFFSRSNCRDSTAVRLFLRERGFDFSEI 187
Query: 194 NVDVFPPREKELIRRTGSSQVPQVFLNDKLFGGLVALNSLRNSGTFDERFREMLGRKCSG 253
N+DV+ REKEL+ RTGSSQVPQ+F N+K FGGL+ALNSLRNSG FD R +E L KC G
Sbjct: 188 NIDVYSSREKELVERTGSSQVPQIFFNEKHFGGLMALNSLRNSGEFDRRVKEFLKEKCCG 247
Query: 254 DAPAPPLYGFXXXXXXXXXXXXXXXX---VKLLRQRLPIQDRLIKLKIVKNCFSGSEMVD 310
DAP P +YGF V++LRQ+LPI+DRL+K+KIVKNCFSG+EMV+
Sbjct: 248 DAPLPVMYGFDEESNNKDVVVVVDEMMRFVRVLRQKLPIKDRLMKMKIVKNCFSGAEMVE 307
Query: 311 VLTHHFKCDRMK 322
+L + C R K
Sbjct: 308 ILIDYLDCGRKK 319
Score = 86 (35.3 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 30/96 (31%), Positives = 42/96 (43%)
Query: 57 IEPHSELPKPEAPAGLFALXXXXXXXXXXGNYSFKFGKFIRERSNNFSAAIVKKLNSLDD 116
+ PH +LPK E P G ++ KFIR+ N S I L + DD
Sbjct: 71 LPPHPQLPKLEPPRG--RRVSLEELLHPKEKFTGDLMKFIRQSGNAISKRISVLLENDDD 128
Query: 117 XXXXXXXXXXXSTVIKPDEVTQFNISGLKVVVKLKS 152
D+VT+F ISG+KV+VK+K+
Sbjct: 129 DDSI-------------DDVTEFKISGVKVLVKMKN 151
>TAIR|locus:2133524 [details] [associations]
symbol:AT4G08550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009055 "electron carrier
activity" evidence=IEA] [GO:0015035 "protein disulfide
oxidoreductase activity" evidence=IEA] [GO:0045454 "cell redox
homeostasis" evidence=IEA] InterPro:IPR002109 Pfam:PF00462
PROSITE:PS51354 EMBL:CP002687 GO:GO:0009055 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0045454 GO:GO:0015035 InterPro:IPR006869
Pfam:PF04784 IPI:IPI00522670 RefSeq:NP_192595.4 UniGene:At.54204
ProteinModelPortal:F4JIA7 SMR:F4JIA7 EnsemblPlants:AT4G08550.1
GeneID:826415 KEGG:ath:AT4G08550 OMA:EINIDIY Uniprot:F4JIA7
Length = 637
Score = 258 (95.9 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 76/304 (25%), Positives = 132/304 (43%)
Query: 27 EIDSSNPNGEDGVNKINGHDHDSDRRHMAIIEPHSELPKPEAPAGLFALXXXXXXXXXXG 86
E + N D + ++ D D D A I E + +G+ +
Sbjct: 81 EEEGDNNVSLDEIMSVDSSDDDDDSESSAEITKACEETVVDERSGI-SQESNSSTSSAWT 139
Query: 87 NYSFKFGKFIRERSNNFSAAIVKKLN---SLDDXXXXXXXXXXXSTVIKPDEVTQFN-IS 142
+ F+R +S ++++L+ S+D+ S K + + +N +S
Sbjct: 140 EKAAAIKNFVRAKSEVAVHTMIRRLSGKLSIDNAAHGTKDDEVESP--KTEGKSLWNPLS 197
Query: 143 GLKVV------VKLKSHXXXXXXKIKGRISFFSRSNCRDCTAVRRFFKQRGLKFVEINVD 196
LK++ V + +KGRI ++R C +C R F ++ L++VEIN+D
Sbjct: 198 YLKMMQNDEDLVYREEETVFEPVVMKGRIILYTRLGCEECRGCRLFLHEKRLRYVEINID 257
Query: 197 VFPPREKELIRRTGSSQVPQVFLNDKLFGGLVALNSLRNSGTFDERFREMLGRKCSGDAP 256
++P R+ EL + +G VP VF N+KL G L L SG +E+ + ++ +AP
Sbjct: 258 IYPTRKVELEKISGGDVVPMVFFNEKLVGSYKELKVLEESGELEEKIKHLIEETPPREAP 317
Query: 257 APPLYGFXXXXXXXXXXXXXXXXVKLLRQRLPIQDRLIKLKIVKNCFSGSEMVDVLTHHF 316
PP G +K+ + ++DR K++ KNCF GSE VD L+
Sbjct: 318 LPPFSGEDDASSKGPVDELALIVLKM--KPCVVKDRFYKMRRFKNCFLGSEAVDFLSADQ 375
Query: 317 KCDR 320
+ +R
Sbjct: 376 RLER 379
>UNIPROTKB|P0AC62 [details] [associations]
symbol:grxC "reduced glutaredoxin 3" species:83333
"Escherichia coli K-12" [GO:0045454 "cell redox homeostasis"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0043295 "glutathione binding" evidence=IDA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0015035 "protein
disulfide oxidoreductase activity" evidence=IEA;IDA] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IEA]
InterPro:IPR002109 InterPro:IPR011767 InterPro:IPR011900
Pfam:PF00462 PROSITE:PS00195 PROSITE:PS51354 GO:GO:0009055
EMBL:U00039 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 GO:GO:0022900 GO:GO:0045454 GO:GO:0015035
eggNOG:COG0695 KO:K03676 InterPro:IPR014025 PRINTS:PR00160
HOGENOM:HOG000095203 GO:GO:0009263 OMA:IYTRQFC TIGRFAMs:TIGR02181
PIR:S47831 RefSeq:NP_418067.1 RefSeq:YP_491823.1 PDB:1FOV PDB:1ILB
PDB:1UQ8 PDB:1UQ9 PDB:1UQI PDB:1UQJ PDB:1UQK PDB:1UQL PDB:1UQM
PDB:1UQO PDB:1UQP PDB:1UQQ PDB:3GRX PDBsum:1FOV PDBsum:1ILB
PDBsum:1UQ8 PDBsum:1UQ9 PDBsum:1UQI PDBsum:1UQJ PDBsum:1UQK
PDBsum:1UQL PDBsum:1UQM PDBsum:1UQO PDBsum:1UQP PDBsum:1UQQ
PDBsum:3GRX ProteinModelPortal:P0AC62 SMR:P0AC62 IntAct:P0AC62
PRIDE:P0AC62 EnsemblBacteria:EBESCT00000003362
EnsemblBacteria:EBESCT00000015443 GeneID:12934301 GeneID:948132
KEGG:ecj:Y75_p3564 KEGG:eco:b3610 PATRIC:32122705 EchoBASE:EB2202
EcoGene:EG12294 ProtClustDB:PRK10638 BioCyc:EcoCyc:GRXC-MONOMER
BioCyc:ECOL316407:JW3585-MONOMER SABIO-RK:P0AC62
EvolutionaryTrace:P0AC62 Genevestigator:P0AC62 Uniprot:P0AC62
Length = 83
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 165 ISFFSRSNCRDCTAVRRFFKQRGLKFVEINVDVFPPREKELIRRTGSSQVPQVFLNDKLF 224
+ +++ C C + +G+ F E+ +D + +E+I+R+G + VPQ+F++ +
Sbjct: 4 VEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQHI 63
Query: 225 GGLVALNSLRNSGTFD 240
GG L +L G D
Sbjct: 64 GGCDDLYALDARGGLD 79
>UNIPROTKB|P0AC65 [details] [associations]
symbol:nrdH "glutaredoxin-like protein" species:83333
"Escherichia coli K-12" [GO:0015035 "protein disulfide
oxidoreductase activity" evidence=IEA] [GO:0051353 "positive
regulation of oxidoreductase activity" evidence=IMP] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0045454 "cell redox
homeostasis" evidence=IEA;IDA] [GO:0009055 "electron carrier
activity" evidence=IEA;IDA] InterPro:IPR002109 InterPro:IPR011909
Pfam:PF00462 PROSITE:PS51354 GO:GO:0009055 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0022900
GO:GO:0051353 GO:GO:0045454 GO:GO:0015035 eggNOG:COG0695
EMBL:X79787 PIR:S70891 RefSeq:NP_417159.1 RefSeq:YP_490888.1
PDB:1H75 PDBsum:1H75 ProteinModelPortal:P0AC65 SMR:P0AC65
DIP:DIP-48164N IntAct:P0AC65 EnsemblBacteria:EBESCT00000001520
EnsemblBacteria:EBESCT00000015734 GeneID:12931699 GeneID:947161
KEGG:ecj:Y75_p2616 KEGG:eco:b2673 PATRIC:32120736 EchoBASE:EB3071
EcoGene:EG13286 HOGENOM:HOG000095206 KO:K06191 OMA:GDDHWSG
ProtClustDB:PRK10329 BioCyc:EcoCyc:G7401-MONOMER
BioCyc:ECOL316407:JW2648-MONOMER EvolutionaryTrace:P0AC65
Genevestigator:P0AC65 TIGRFAMs:TIGR02194 Uniprot:P0AC65
Length = 81
Score = 103 (41.3 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 164 RISFFSRSNCRDCTAVRRFFKQRGLKFVEINVDVFPPREKELIRRTGSSQVPQVFLNDKL 223
RI+ ++R++C C A +R + RG F INVD P E +R G Q+P V D
Sbjct: 2 RITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVP-EAAEALRAQGFRQLPVVIAGDLS 60
Query: 224 FGG 226
+ G
Sbjct: 61 WSG 63
>WB|WBGene00022663 [details] [associations]
symbol:glrx-21 species:6239 "Caenorhabditis elegans"
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0015035
"protein disulfide oxidoreductase activity" evidence=IEA]
[GO:0045454 "cell redox homeostasis" evidence=IEA]
InterPro:IPR002109 Pfam:PF00462 PROSITE:PS51354 GO:GO:0009055
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0045454
GO:GO:0015035 HOGENOM:HOG000095204 KO:K03676 InterPro:IPR014025
PRINTS:PR00160 HSSP:P37687 EMBL:FO081436 GeneID:191230
KEGG:cel:CELE_ZK121.1 UCSC:ZK121.1b.2 CTD:191230
GeneTree:ENSGT00650000094463 NextBio:948428 RefSeq:NP_001040891.1
ProteinModelPortal:Q9N4P2 SMR:Q9N4P2 IntAct:Q9N4P2 STRING:Q9N4P2
EnsemblMetazoa:ZK121.1a WormBase:ZK121.1a InParanoid:Q9N4P2
OMA:AQCTGEN ArrayExpress:Q9N4P2 Uniprot:Q9N4P2
Length = 119
Score = 101 (40.6 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 162 KGRISFFSRSNCRDCTAVRRFFKQRGLKFVEINVDVFPPREKE--------LIRRTGSSQ 213
K + +++++C C + F + + E+N+D + + L+ T +
Sbjct: 19 KDPVVMYTKTSCTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQTS 78
Query: 214 VPQVFLNDKLFGGLVALNSLRNSGTFDERFREMLG 248
VPQ+F+ + GG L++LRNSG E + G
Sbjct: 79 VPQIFVCGRFIGGYTELDALRNSGHLFEAIAQCTG 113
>UNIPROTKB|P73492 [details] [associations]
symbol:ssr2061 "Probable glutaredoxin ssr2061"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR002109
InterPro:IPR011767 InterPro:IPR011900 Pfam:PF00462 PROSITE:PS00195
PROSITE:PS51354 GO:GO:0009055 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 GO:GO:0022900 GO:GO:0045454 GO:GO:0015035
EMBL:BA000022 GenomeReviews:BA000022_GR eggNOG:COG0695 KO:K03676
InterPro:IPR014025 PRINTS:PR00160 HOGENOM:HOG000095203 PIR:S77429
RefSeq:NP_440852.1 RefSeq:YP_005650911.1 PDB:3QMX PDBsum:3QMX
ProteinModelPortal:P73492 SMR:P73492 STRING:P73492 GeneID:12254915
GeneID:954155 KEGG:syn:ssr2061 KEGG:syy:SYNGTS_0958 PATRIC:23838944
OMA:IYTRQFC TIGRFAMs:TIGR02181 Uniprot:P73492
Length = 88
Score = 99 (39.9 bits), Expect = 0.00011, P = 0.00011
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 161 IKGRISFFSRSNCRDCTAVRRFFKQRGLKFVEINVDVF-PPREKELIRRTGSSQVPQVFL 219
+ +I ++ S C C K++G++F E +D RE R G +PQ+F+
Sbjct: 3 VSAKIEIYTWSTCPFCMRALALLKRKGVEFQEYCIDGDNEAREAMAARANGKRSLPQIFI 62
Query: 220 NDKLFGGLVALNSLRNSGTFD 240
+D+ GG + +L +G D
Sbjct: 63 DDQHIGGCDDIYALDGAGKLD 83
>WB|WBGene00012869 [details] [associations]
symbol:Y45F10A.7 species:6239 "Caenorhabditis elegans"
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0015035
"protein disulfide oxidoreductase activity" evidence=IEA]
[GO:0045454 "cell redox homeostasis" evidence=IEA]
InterPro:IPR000591 InterPro:IPR002109 Pfam:PF00462 Pfam:PF00610
PROSITE:PS50186 PROSITE:PS51354 GO:GO:0035556 GO:GO:0009055
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0045454
GO:GO:0015035 EMBL:AL021488 GeneID:178318 KEGG:cel:CELE_Y45F10A.7
CTD:178318 GeneTree:ENSGT00390000016088 InterPro:IPR006869
Pfam:PF04784 PIR:T26906 RefSeq:NP_001076732.1
ProteinModelPortal:O62456 SMR:O62456 EnsemblMetazoa:Y45F10A.7a
UCSC:Y45F10A.7a WormBase:Y45F10A.7a eggNOG:NOG278779
HOGENOM:HOG000016411 InParanoid:O62456 OMA:GNQRPPY NextBio:900630
ArrayExpress:O62456 Uniprot:O62456
Length = 531
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 37/164 (22%), Positives = 67/164 (40%)
Query: 163 GRISFFSRSNCRDCTAVRRFFKQRGLKFVEINVDVFPPREKELIRRTGSSQVPQVFLNDK 222
G++ ++ C R + G+ + ++++D FP +E+ RTG+ +PQ+F N+
Sbjct: 17 GQVVIYTEIGNSKCAKGRDLLHREGIPYTDVSLDSFPQHSQEIFDRTGTDVLPQIFFNNI 76
Query: 223 LFGGLVALNSLRNSGTFDERFREMLGR-KCSGDAPAPP----LYGFXXXXXXXXXX---- 273
G L + E E + R KC+ P P GF
Sbjct: 77 YIGHETDLERVIGETNKWESLVEHVRREKCTNGGPIVPHPMNAIGFEEYETENNNKCCDE 136
Query: 274 -----XXXXXXVKLLRQRLPIQDRLIKLKIVKNCFSGSEMVDVL 312
V+ ++ I++ +KLK+ +N F G E+V+ L
Sbjct: 137 VLWVPDEYSKLVRDMKNAQLIKNNRVKLKVYRNSFKGEELVEWL 180
>POMBASE|SPAC15E1.09 [details] [associations]
symbol:grx2 "glutaredoxin Grx2" species:4896
"Schizosaccharomyces pombe" [GO:0004364 "glutathione transferase
activity" evidence=ISS] [GO:0004602 "glutathione peroxidase
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0015035
"protein disulfide oxidoreductase activity" evidence=IEA]
[GO:0019430 "removal of superoxide radicals" evidence=IC]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0034599
"cellular response to oxidative stress" evidence=IGI] [GO:0045454
"cell redox homeostasis" evidence=ISS] InterPro:IPR002109
InterPro:IPR011767 InterPro:IPR011899 Pfam:PF00462 PROSITE:PS00195
PROSITE:PS51354 PomBase:SPAC15E1.09 GO:GO:0005739 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0009055 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0022900 GO:GO:0045454
GO:GO:0015035 GO:GO:0004602 GO:GO:0004364 GO:GO:0019430
eggNOG:COG0695 HOGENOM:HOG000095204 KO:K03676 InterPro:IPR014025
PRINTS:PR00160 TIGRFAMs:TIGR02180 OrthoDB:EOG4V1B9J EMBL:AF380128
PIR:T37724 RefSeq:NP_594310.1 ProteinModelPortal:Q9UTI2
STRING:Q9UTI2 EnsemblFungi:SPAC15E1.09.1 GeneID:2542807
KEGG:spo:SPAC15E1.09 OMA:VDAYESG NextBio:20803850 Uniprot:Q9UTI2
Length = 110
Score = 93 (37.8 bits), Expect = 0.00049, P = 0.00048
Identities = 25/91 (27%), Positives = 40/91 (43%)
Query: 165 ISFFSRSNCRDCTAVRRFFKQRGLKFVEINVDVFPPR---EKELIRRTGSSQVPQVFLND 221
++ FS+S C C A + + + +D + L +T S VP +F +
Sbjct: 18 VTVFSKSFCPFCKAAKNTLTKYSAPYKAYELDKIENGSDIQAYLHEKTKQSTVPSIFFRN 77
Query: 222 KLFGGLVALNSLRNSGTFDERFREMLGRKCS 252
+ GG LN LR+SGT + E+ K S
Sbjct: 78 QFIGGNSDLNKLRSSGTLTKMIAELKENKSS 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 327 284 0.00085 115 3 11 22 0.45 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 573 (61 KB)
Total size of DFA: 187 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.81u 0.08s 20.89t Elapsed: 00:00:05
Total cpu time: 20.81u 0.08s 20.89t Elapsed: 00:00:05
Start: Fri May 10 15:01:08 2013 End: Fri May 10 15:01:13 2013