Your job contains 1 sequence.
>039227
MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLR
KFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCC
REIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPSGKKSGIRFSSKKRMRKISQWKARE
NGDIPCPVNKLGGCGHEYLELKCIFANGWLSELKVKAKKLVKVHNLVDRPHHSGQSCSCF
KLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITNVLD
YSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVKINTYQFFKAYMEGRTHSN
SWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDL
GPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQ
DRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSLNGKDGGALWDIFRREDVPKL
GEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAV
LIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039227
(654 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2008875 - symbol:AT1G11950 "AT1G11950" species... 1058 1.4e-163 2
TAIR|locus:2125221 - symbol:AT4G00990 "AT4G00990" species... 970 2.0e-147 2
TAIR|locus:2027109 - symbol:AT1G62310 "AT1G62310" species... 1302 7.9e-133 1
TAIR|locus:2036014 - symbol:AT1G09060 "AT1G09060" species... 742 5.4e-94 2
TAIR|locus:2141221 - symbol:B160 "AT4G21430" species:3702... 430 8.1e-78 3
UNIPROTKB|Q9Y4C1 - symbol:KDM3A "Lysine-specific demethyl... 322 6.1e-49 3
UNIPROTKB|E1BFC2 - symbol:KDM3A "Uncharacterized protein"... 322 2.0e-48 3
UNIPROTKB|F1SVC8 - symbol:KDM3A "Uncharacterized protein"... 322 2.0e-48 3
UNIPROTKB|E2QWU9 - symbol:KDM3A "Uncharacterized protein"... 322 2.6e-48 3
RGD|708351 - symbol:Kdm3a "lysine (K)-specific demethylas... 324 7.0e-48 3
MGI|MGI:98847 - symbol:Kdm3a "lysine (K)-specific demethy... 324 1.0e-47 3
MGI|MGI:1923356 - symbol:Kdm3b "KDM3B lysine (K)-specific... 322 1.4e-47 3
UNIPROTKB|E1BE97 - symbol:LOC100848816 "Uncharacterized p... 322 2.2e-47 3
UNIPROTKB|Q7LBC6 - symbol:KDM3B "Lysine-specific demethyl... 322 2.2e-47 3
UNIPROTKB|F1RH75 - symbol:KDM3B "Uncharacterized protein"... 322 2.3e-47 3
UNIPROTKB|F1NJZ2 - symbol:KDM3B "Uncharacterized protein"... 316 2.2e-46 3
UNIPROTKB|Q5ZIX8 - symbol:KDM3A "Lysine-specific demethyl... 317 1.7e-44 3
FB|FBgn0037703 - symbol:JHDM2 "JmjC domain-containing his... 283 7.1e-43 3
UNIPROTKB|E1C232 - symbol:KDM3A "Lysine-specific demethyl... 299 9.5e-43 3
UNIPROTKB|Q15652 - symbol:JMJD1C "Probable JmjC domain-co... 239 4.6e-31 3
MGI|MGI:1918614 - symbol:Jmjd1c "jumonji domain containin... 236 1.6e-30 3
UNIPROTKB|F1MBI2 - symbol:HR "Uncharacterized protein" sp... 176 9.2e-18 4
UNIPROTKB|O43593 - symbol:HR "Protein hairless" species:9... 174 3.9e-17 4
RGD|620634 - symbol:Hr "hair growth associated" species:1... 187 2.4e-16 3
UNIPROTKB|F1RMB8 - symbol:HR "Uncharacterized protein" sp... 174 4.8e-16 4
MGI|MGI:96223 - symbol:Hr "hairless" species:10090 "Mus m... 186 4.9e-16 3
UNIPROTKB|F1PFJ6 - symbol:HR "Uncharacterized protein" sp... 163 4.8e-15 4
RGD|708458 - symbol:Jmjd1c "jumonji domain containing 1C"... 189 7.9e-14 1
>TAIR|locus:2008875 [details] [associations]
symbol:AT1G11950 "AT1G11950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:NOG305537 KO:K15601 EMBL:AB493451 IPI:IPI00542320
RefSeq:NP_172659.3 UniGene:At.42102 ProteinModelPortal:C0SUU8
PRIDE:C0SUU8 EnsemblPlants:AT1G11950.1 GeneID:837747
KEGG:ath:AT1G11950 TAIR:At1g11950 HOGENOM:HOG000243122 OMA:NHCATSI
PhylomeDB:C0SUU8 ProtClustDB:CLSN2914506 Genevestigator:C0SUU8
Uniprot:C0SUU8
Length = 875
Score = 1058 (377.5 bits), Expect = 1.4e-163, Sum P(2) = 1.4e-163
Identities = 223/491 (45%), Positives = 292/491 (59%)
Query: 1 MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLR 60
+S + I + CPFC CNC CLH+S +++ ++ E H ++L+ + PFL+
Sbjct: 227 LSTDDILEKCPFCRGTCNCCTCLHSSGLIETSK---RKLDKYERFYHLRFLIVAMLPFLK 283
Query: 61 KFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNN-----FDYYRSCPRCSYDL 115
K Q +E + EAK++ S++++ + + + ER+FCN+ D +RSCP+CSY+L
Sbjct: 284 KLCKAQDQEIETEAKVQDSMASQVDISESLCSNEERVFCNHCATSIVDLHRSCPKCSYEL 343
Query: 116 CLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPSGKKSGIRFSSKKRMRKISQ 175
CL CC+EIR G L RG Y+HG + P S S + +
Sbjct: 344 CLNCCQEIRGGWLSDRPECQLQFEYRGTRYIHGEAAEPSSSS------VSEDETKTPSIK 397
Query: 176 WKARENGDIPCPVNKLGGCGHEYLELKCIFANGWXXXXXXXXXXXXXXXXXXDRPHHSGQ 235
W A ENG I C +LGGCG LELK I W +P S
Sbjct: 398 WNADENGSIRCAPKELGGCGDSVLELKRILPVTWMSDLEQKAETFLASYSI--KPPMS-- 453
Query: 236 SCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDV-QHESLEHFKSHWIKGEPVI 294
C C D S RKAASR+G SDNYLY P + DV + E L HF+ HW KGEPVI
Sbjct: 454 YCRCSS-----DMSSMK-RKAASRDGSSDNYLYSPDSLDVLKQEELLHFQEHWSKGEPVI 507
Query: 295 ITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLV-VKTVDCLDLCEVKINTYQFFKAYM 353
+ N L+ ++GLSWEPMVM RA+ + S S + VK +DCL CEVKINT FF+ Y
Sbjct: 508 VRNALNNTAGLSWEPMVMWRALCENVDSAISSNMSDVKAIDCLANCEVKINTLCFFEGYS 567
Query: 354 EGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPP 413
+GRT+ N WP +LKLKDWPPS FE LP H EF++ LP+++Y+ P SGILNIATKLP
Sbjct: 568 KGRTYENFWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYSDPRSGILNIATKLPE 627
Query: 414 DFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKL 473
LKPDLGPK Y+AYG ++ELGRGDSVTKLHCDMSDAVN+LMHTA+V S +Q + I L
Sbjct: 628 GLLKPDLGPKTYVAYGTSDELGRGDSVTKLHCDMSDAVNILMHTAEVTLSEEQRSAIADL 687
Query: 474 KRKHAIQDRRE 484
K+KH Q+ +E
Sbjct: 688 KQKHKQQNEKE 698
Score = 556 (200.8 bits), Expect = 1.4e-163, Sum P(2) = 1.4e-163
Identities = 97/140 (69%), Positives = 120/140 (85%)
Query: 515 SNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLN 574
S+ + + + GALWDIF+REDVPKL EYLR H EFRH YCS V +V HPIHDQ+++L
Sbjct: 712 SDEIVVYDETSGALWDIFKREDVPKLEEYLRKHCIEFRHTYCSRVTKVYHPIHDQSYFLT 771
Query: 575 MYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIR 634
+ HK+KLK EFG+EPW+FVQ+LGEAV IPAGCPHQVRNL SCTK+A+DFVSPENI+EC+R
Sbjct: 772 VEHKRKLKAEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIDECLR 831
Query: 635 LTDEFRTLPRNHRAKKDKLQ 654
LTDEFR LP+NH+A++DKL+
Sbjct: 832 LTDEFRQLPKNHKAREDKLE 851
Score = 41 (19.5 bits), Expect = 3.4e-109, Sum P(2) = 3.4e-109
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 462 YSSKQVAEIEKLKRKHAIQDRREF-------FNPLYARDETFDMNHS---KSEEKLRPIS 511
+ + V ++E+ RKH I+ R + ++P++ + + H K+E + P +
Sbjct: 729 FKREDVPKLEEYLRKHCIEFRHTYCSRVTKVYHPIHDQSYFLTVEHKRKLKAEFGIEPWT 788
Query: 512 SMQ 514
+Q
Sbjct: 789 FVQ 791
>TAIR|locus:2125221 [details] [associations]
symbol:AT4G00990 "AT4G00990" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00184 SMART:SM00558 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0008270 eggNOG:NOG305537 KO:K15601 HOGENOM:HOG000243122
EMBL:AY072204 EMBL:AY096708 IPI:IPI00545540 RefSeq:NP_192008.3
UniGene:At.3531 ProteinModelPortal:Q8VYB9 PaxDb:Q8VYB9 PRIDE:Q8VYB9
EnsemblPlants:AT4G00990.1 GeneID:827933 KEGG:ath:AT4G00990
TAIR:At4g00990 InParanoid:Q8VYB9 OMA:GYLEGRM PhylomeDB:Q8VYB9
ProtClustDB:CLSN2918567 Genevestigator:Q8VYB9 Uniprot:Q8VYB9
Length = 840
Score = 970 (346.5 bits), Expect = 2.0e-147, Sum P(2) = 2.0e-147
Identities = 223/558 (39%), Positives = 313/558 (56%)
Query: 2 SEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLRK 61
+ E + +CPFC C C ACL ++K + K + +YLL + P L+
Sbjct: 116 THEEVRAACPFCMMTCICRACLRLPLVIKPPSEKDTDVK----LKQLQYLLVKVLPVLKD 171
Query: 62 FHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNNF-----DYYRSCPR--CSYD 114
+ +Q +E +IE+ I+G ++E + + L +ER++C+ +++RSCP CS D
Sbjct: 172 IYTEQNRELEIESTIRGHPVTEANIKRCKLDPSERIYCDLCRTSIANFHRSCPNKNCSVD 231
Query: 115 LCLTCCREIRDGCLQGGVNMYTSHFDR-GKAYLHG-GESLPLPSGKKSGIRFSSKKRMRK 172
+CL+CC+E+ +G H +R GK G G +P+G+ G + S
Sbjct: 232 ICLSCCKELSEGF----------HQERDGKKNAEGKGYECRIPAGQ--G-KDSDAYVPLH 278
Query: 173 ISQWKARENGDIPCPVNKLGGCGHEYLELKCIFANGWXXXXXXXXXXXXXXXXXXDRPH- 231
S WK + IPCP + GGCG LEL+ ++ W D
Sbjct: 279 FSTWKLNSDSSIPCPPKECGGCGTSTLELRRLWKRDWVEKLITNAEKCTLNFRPTDVDIV 338
Query: 232 HSGQSCSCFKLNGQIDCCSKSLRK-AASREGVSDNYLYCPSATDVQHESLEHFKSHWIKG 290
H SCS N S S+R+ AA R+ DN+LY P+A D+ + + HF+ HW+K
Sbjct: 339 HECSSCST---N------SDSIRRQAAFRKNAHDNFLYSPNAVDLAEDDIAHFQFHWMKA 389
Query: 291 EPVIITNVLDYSSGLSWEPMVMSRAVRDTSYS-KGSQKLV--VKTVDCLDLCEVKINTYQ 347
EPVI+ NVL+ +SGLSWEPMVM RA R+ KG+++ VK +DCLD CEV+IN +Q
Sbjct: 390 EPVIVRNVLEKTSGLSWEPMVMWRACREMDPKRKGTEEETTKVKALDCLDWCEVEINLHQ 449
Query: 348 FFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNI 407
FF+ Y+EGR H N WP +LKLKDWPPS LFE+RLP H AEF+ LP+ DYT P SGILN+
Sbjct: 450 FFEGYLEGRMHKNGWPEMLKLKDWPPSDLFEKRLPRHNAEFIAALPFFDYTDPKSGILNL 509
Query: 408 ATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQV 467
AT+ P LKPDLGPK YIAYG EEL RGDSVTKLHCD+SDAVNVL HTAKV+ +
Sbjct: 510 ATRFPEGSLKPDLGPKTYIAYGFHEELNRGDSVTKLHCDISDAVNVLTHTAKVEIPPVKY 569
Query: 468 AEIEKLKRKHA--IQDRREFFNPLYARDETF-----DMNHSKSEEKLRPISSMQSNTLSL 520
I+ ++K+A + ++++ + E +++ SK + K + + QSN S
Sbjct: 570 QNIKVHQKKYAEAMLQKQQYSGQVKEASELENKSMKEVDESKKDLKDKAANEEQSNNSSR 629
Query: 521 NGKDGGALWDIFRREDVP 538
G A I +ED P
Sbjct: 630 PSGSGEAEKVIISKEDNP 647
Score = 491 (177.9 bits), Expect = 2.0e-147, Sum P(2) = 2.0e-147
Identities = 90/155 (58%), Positives = 113/155 (72%)
Query: 501 SKSEEKLRPISSMQSNTLSLN-GKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPV 559
S E+KL NT + GGA+WDIFRREDVPKL ++L+ H EFRH P+
Sbjct: 658 SIQEQKLDAPKETDGNTNERSKAVHGGAVWDIFRREDVPKLIQFLKRHEHEFRHFNNEPL 717
Query: 560 EQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKI 619
E V+HPIHDQT +L+ KK+LKEEF +EPW+F Q LGEAV IPAGCPHQVRN SC K+
Sbjct: 718 ESVIHPIHDQTMFLSDSQKKQLKEEFDIEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKV 777
Query: 620 ALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
ALDFV+PE++ EC+RLT EFR LP++H + +DKL+
Sbjct: 778 ALDFVAPESVEECLRLTQEFRRLPKDHSSSEDKLE 812
Score = 41 (19.5 bits), Expect = 5.4e-48, Sum P(2) = 5.4e-48
Identities = 19/81 (23%), Positives = 32/81 (39%)
Query: 10 CPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLRKFHHDQVKE 69
C C + C C C+ S + ++ A + LRL P + K E
Sbjct: 95 CSKCNKKCYCFDCIKRSYSERTHEEVRAACPFCMMTCICRACLRL--PLVIK----PPSE 148
Query: 70 KKIEAKIKGLELSEIEVPQVV 90
K + K+K L+ ++V V+
Sbjct: 149 KDTDVKLKQLQYLLVKVLPVL 169
>TAIR|locus:2027109 [details] [associations]
symbol:AT1G62310 "AT1G62310" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50089
PROSITE:PS51184 SMART:SM00184 SMART:SM00558 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
eggNOG:NOG305537 KO:K15601 HOGENOM:HOG000243122
ProtClustDB:CLSN2914506 EMBL:AB493515 IPI:IPI00545153
RefSeq:NP_176421.1 UniGene:At.36279 UniGene:At.68585
ProteinModelPortal:C0SV12 SMR:C0SV12 PRIDE:C0SV12
EnsemblPlants:AT1G62310.1 GeneID:842529 KEGG:ath:AT1G62310
TAIR:At1g62310 OMA:LANCEVE PhylomeDB:C0SV12 Genevestigator:C0SV12
Uniprot:C0SV12
Length = 883
Score = 1302 (463.4 bits), Expect = 7.9e-133, P = 7.9e-133
Identities = 248/435 (57%), Positives = 320/435 (73%)
Query: 228 DRPHHSGQSCSCFKLNGQ-IDCCSKSL-----RKAASREGVSDNYLYCPSATDV-QHESL 280
D H + S + ++ + ++C SL RK+ASR SDNYL+CP + V + E L
Sbjct: 452 DLEHKAETFLSSYNISPRMLNCRCSSLETELTRKSASRTTSSDNYLFCPESLGVLKEEEL 511
Query: 281 EHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLV-VKTVDCLDLC 339
HF+ HW KGEPVI+ N LD + GLSWEPMVM RA+ + S S ++ VK +DCL C
Sbjct: 512 LHFQEHWAKGEPVIVRNALDNTPGLSWEPMVMWRALCENVNSTSSSEMSQVKAIDCLANC 571
Query: 340 EVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTH 399
EV+INT QFF+ Y +GRT+ N WP +LKLKDWPPS FE+ LP H EF++ LP+++Y+
Sbjct: 572 EVEINTRQFFEGYSKGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSD 631
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAK 459
P +GILNIATKLP F+KPDLGPK YIAYG+ +ELGRGDSVTKLHCDMSDAVN+L HTA+
Sbjct: 632 PRTGILNIATKLPEGFIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHTAE 691
Query: 460 VDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLS 519
V S +Q++ ++ LK+KH +Q++ + + T D N + EE+ +M + +
Sbjct: 692 VTLSQEQISSVKALKQKHKLQNKVD-------KQSTEDCNEKEEEEEEE--LNMPEISSN 742
Query: 520 LNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKK 579
N + G ALWDIFRREDVPKL EYLR H KEFRH YCSPV +V HPIHDQ+ YL + HK+
Sbjct: 743 ENEETGSALWDIFRREDVPKLEEYLRKHCKEFRHTYCSPVTKVYHPIHDQSCYLTLEHKR 802
Query: 580 KLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEF 639
KLK E+G+EPW+FVQ+LGEAV IPAGCPHQVRNL SCTK+A+DFVSPENI+EC+RLT+EF
Sbjct: 803 KLKAEYGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTEEF 862
Query: 640 RTLPRNHRAKKDKLQ 654
R LP+NH+A++DKL+
Sbjct: 863 RQLPKNHKAREDKLE 877
Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
Identities = 222/490 (45%), Positives = 307/490 (62%)
Query: 1 MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVT-RDLGAPAKTVENIGHFKYLLRLLYPFL 59
+SE+ + + CP C +NCNC+ CLH + +++ + R+L AK+ E H +YL+ L+ PFL
Sbjct: 243 LSEDDVVEKCPLCRQNCNCSKCLHLNGLIETSKREL---AKS-ERRHHLQYLITLMLPFL 298
Query: 60 RKFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNN-----FDYYRSCPRCSYD 114
K Q E + EA ++G SE+E+ + ++ER++C++ D +RSCP+CSY+
Sbjct: 299 NKLSIFQKLEIEFEATVQGKLPSEVEITAAISYTDERVYCDHCATSIVDLHRSCPKCSYE 358
Query: 115 LCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPSGKKSGIRFSSKKRMRKIS 174
LCL CC+EIR+G L M + DRG Y+HG ++ PS + F ++ +
Sbjct: 359 LCLKCCQEIREGSLSERPEMKFHYVDRGHRYMHGLDAAE-PSLSST---FEDEEANPSDA 414
Query: 175 QWKARENGDIPCPVNKLGGCGHEYLELKCIFANGWXXXXXXXXXXXXXXXXXXDRPHHSG 234
+W ENG I C KLGGCG LEL+ I W R
Sbjct: 415 KWSLGENGSITCAPEKLGGCGERMLELRRILPLTWMSDLEHKAETFLSSYNISPRM---- 470
Query: 235 QSCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDV-QHESLEHFKSHWIKGEPV 293
+C C L ++ RK+ASR SDNYL+CP + V + E L HF+ HW KGEPV
Sbjct: 471 LNCRCSSLETELT------RKSASRTTSSDNYLFCPESLGVLKEEELLHFQEHWAKGEPV 524
Query: 294 IITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLV-VKTVDCLDLCEVKINTYQFFKAY 352
I+ N LD + GLSWEPMVM RA+ + S S ++ VK +DCL CEV+INT QFF+ Y
Sbjct: 525 IVRNALDNTPGLSWEPMVMWRALCENVNSTSSSEMSQVKAIDCLANCEVEINTRQFFEGY 584
Query: 353 MEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLP 412
+GRT+ N WP +LKLKDWPPS FE+ LP H EF++ LP+++Y+ P +GILNIATKLP
Sbjct: 585 SKGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSDPRTGILNIATKLP 644
Query: 413 PDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEK 472
F+KPDLGPK YIAYG+ +ELGRGDSVTKLHCDMSDAVN+L HTA+V S +Q++ ++
Sbjct: 645 EGFIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHTAEVTLSQEQISSVKA 704
Query: 473 LKRKHAIQDR 482
LK+KH +Q++
Sbjct: 705 LKQKHKLQNK 714
>TAIR|locus:2036014 [details] [associations]
symbol:AT1G09060 "AT1G09060" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001841 InterPro:IPR003347 InterPro:IPR014977
Pfam:PF02373 Pfam:PF08879 PROSITE:PS50089 PROSITE:PS51184
SMART:SM00184 SMART:SM00558 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018866 Pfam:PF10497 KO:K15601
IPI:IPI00656590 RefSeq:NP_001031007.1 UniGene:At.10382
ProteinModelPortal:F4HZD1 PRIDE:F4HZD1 EnsemblPlants:AT1G09060.3
GeneID:837427 KEGG:ath:AT1G09060 OMA:MNWVAKL PhylomeDB:F4HZD1
Uniprot:F4HZD1
Length = 944
Score = 742 (266.3 bits), Expect = 5.4e-94, Sum P(2) = 5.4e-94
Identities = 175/501 (34%), Positives = 264/501 (52%)
Query: 172 KISQWKARENGDIPCPVNKLGGCGHEYLELKCIFANGWXXXXXXXXXXXXXXXXXXDRPH 231
K +W+A +G IPCP + GGCG L L IF W
Sbjct: 406 KFPEWEANGDGSIPCPPKEYGGCGSHSLNLARIFKMNWVAKLVKNAEEIV---------- 455
Query: 232 HSGQSCSCFKLNGQIDCCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGE 291
SG S LN D C K A RE DNY+Y PS ++ + + F+ W +G
Sbjct: 456 -SGCKLSDL-LNP--DMCDSRFCKFAEREESGDNYVYSPSLETIKTDGVAKFEQQWAEGR 511
Query: 292 PVIITNVLDYSSGLSWEPMVMSRAVRDTSYSK-GSQKLVVKTVDCLDLCEVKINTYQFFK 350
V + VLD SS W+P + R + + S K +K ++CLD EV + +F +
Sbjct: 512 LVTVKMVLDDSSCSRWDPETIWRDIDELSDEKLREHDPFLKAINCLDGLEVDVRLGEFTR 571
Query: 351 AYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATK 410
AY +G+ P++ KLKDWP EE + EF+ P+ +Y HP G+LN+A K
Sbjct: 572 AYKDGKNQETGLPLLWKLKDWPSPSASEEFIFYQRPEFIRSFPFLEYIHPRLGLLNVAAK 631
Query: 411 LPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEI 470
LP L+ D GPK Y++ G +E+ GDS+T +H +M D V +L+HT++ + + ++V +
Sbjct: 632 LPHYSLQNDSGPKIYVSCGTYQEISAGDSLTGIHYNMRDMVYLLVHTSE-ETTFERVRKT 690
Query: 471 EKLKRK--HAIQDRREFFNPLYA-RD-ETFDMNHSK-SEEKLRPISSMQSN--TLSLNGK 523
+ + + + + +P RD E D++ + S EK P ++ N L+ NG
Sbjct: 691 KPVPEEPDQKMSENESLLSPEQKLRDGELHDLSLGEASMEKNEPELALTVNPENLTENGD 750
Query: 524 D----------GGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYL 573
+ GGA WD+FRR+DVPKL YL+ ++ ++ + V P+++ F L
Sbjct: 751 NMESSCTSSCAGGAQWDVFRRQDVPKLSGYLQRTFQKPDNIQ---TDFVSRPLYEGLF-L 806
Query: 574 NMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECI 633
N +HK++L++EFGVEPW+F Q GEA+ IPAGCP Q+ NL S ++ALDF+ PE++ E
Sbjct: 807 NEHHKRQLRDEFGVEPWTFEQHRGEAIFIPAGCPFQITNLQSNIQVALDFLCPESVGESA 866
Query: 634 RLTDEFRTLPRNHRAKKDKLQ 654
RL +E R LP +H AK L+
Sbjct: 867 RLAEEIRCLPNDHEAKLQILE 887
Score = 213 (80.0 bits), Expect = 5.4e-94, Sum P(2) = 5.4e-94
Identities = 43/131 (32%), Positives = 78/131 (59%)
Query: 1 MSEEAIAKSCPFCCRNCNCNACLHNSEIVKVT-RDLGAPAKTVENIGHFKYLLRLLYPFL 59
+S E + K CP C C+C +CL + +KV R++ P ++ + + LL + P +
Sbjct: 254 ISLEEVEKVCPACRGLCDCKSCLRSDNTIKVRIREI--PV--LDKLQYLYRLLSAVLPVI 309
Query: 60 RKFHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNN-----FDYYRSCPRCSYD 114
++ H +Q E ++E +++ +E I++ + L+++E++ CN DYYR CP CSYD
Sbjct: 310 KQIHLEQCMEVELEKRLREVE---IDLVRARLKADEQMCCNVCRIPVVDYYRHCPNCSYD 366
Query: 115 LCLTCCREIRD 125
LCL CC+++R+
Sbjct: 367 LCLRCCQDLRE 377
Score = 39 (18.8 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 91 LRSNERLFCNN 101
L+ N+R FC+N
Sbjct: 235 LKCNQRAFCHN 245
>TAIR|locus:2141221 [details] [associations]
symbol:B160 "AT4G21430" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001841 InterPro:IPR003347
InterPro:IPR014977 Pfam:PF02373 Pfam:PF08879 PROSITE:PS50089
PROSITE:PS51184 SMART:SM00184 SMART:SM00558 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 KO:K15601 EMBL:AY142484 EMBL:AB493691
IPI:IPI00524203 RefSeq:NP_193874.2 UniGene:At.32630
ProteinModelPortal:Q8H1S7 PRIDE:Q8H1S7 EnsemblPlants:AT4G21430.1
GeneID:827895 KEGG:ath:AT4G21430 TAIR:At4g21430 InParanoid:Q8H1S7
OMA:NILPISH PhylomeDB:Q8H1S7 ProtClustDB:CLSN2719050
ArrayExpress:Q8H1S7 Genevestigator:Q8H1S7 Uniprot:Q8H1S7
Length = 927
Score = 430 (156.4 bits), Expect = 8.1e-78, Sum P(3) = 8.1e-78
Identities = 103/300 (34%), Positives = 152/300 (50%)
Query: 239 CFKLNGQIDCCSKSLRKAA-SREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITN 297
C + Q L++A+ +RE + N+LY P+ D +LEHF++HW KG PVI+ +
Sbjct: 463 CIGMETQSSSSDSHLKEASKTREDGTGNFLYYPTVLDFHQNNLEHFQTHWSKGHPVIVRS 522
Query: 298 VLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVKINTYQFFKAYMEGRT 357
V+ S L+W+P+ + Y T DC+D EV+I QFF + G+
Sbjct: 523 VIKSGSSLNWDPVALF-----CHYLMNRNNKTGNTTDCMDWFEVEIGVKQFFLGSLRGKA 577
Query: 358 HSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLK 417
+N+ LKL+ W S LF+E+ P H AE +NILP Y P G+LNIA LP
Sbjct: 578 ETNTCQERLKLEGWLSSSLFKEQFPNHYAEILNILPISHYMDPKRGLLNIAANLPDTVQP 637
Query: 418 PDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKH 477
PD GP I+Y EE + DSV KL + D V++L++ + S+ Q+ I KL K+
Sbjct: 638 PDFGPCLNISYRSGEEYAQPDSVKKLGFETCDMVDILLYVTETPVSTNQICRIRKLM-KN 696
Query: 478 AIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLS--LNGKDGGALWDIFRRE 535
+ R + NP R+ FD K ++L SS S + L K G+ ++ RE
Sbjct: 697 IGRVRSK--NPAKGRESRFDKG--KKRDRLDDYSSSDSESSQHCLGAKCRGSEFEGEERE 752
Score = 344 (126.2 bits), Expect = 8.1e-78, Sum P(3) = 8.1e-78
Identities = 61/129 (47%), Positives = 93/129 (72%)
Query: 526 GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEF 585
GA WD+F+++DV KL EY++NH E + S ++V HP+ +Q++YL+ YHK +LKEEF
Sbjct: 768 GAQWDVFQKQDVSKLLEYIKNHSLELESMDSSK-KKVSHPLLEQSYYLDEYHKARLKEEF 826
Query: 586 GVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRN 645
VEPWSF Q +GEAV++PAGCP+Q+R SC L F+SPE+++E I+ E LP++
Sbjct: 827 DVEPWSFDQCVGEAVILPAGCPYQIRKNKSCVNAVLKFLSPEHVSESIKRVKELNQLPQS 886
Query: 646 HRAKKDKLQ 654
++K +K++
Sbjct: 887 VKSKANKIE 895
Score = 118 (46.6 bits), Expect = 8.1e-78, Sum P(3) = 8.1e-78
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 2 SEEAIAKSCPFCCRNCNCNACLHNSEIVKVTRDLGAPAKTVENIGHFKYLLRLLYPFLRK 61
S+E + K CP C +C C C + V +D + ++ + H Y + +L P L++
Sbjct: 261 SKEEVEKKCPVCRGSCRCKVCSVTNSGVTECKDSQSVRSDIDRVLHLHYAVCMLLPVLKE 320
Query: 62 FHHDQVKEKKIEAKIKGLELSEIEVPQVVLRSNERLFCNN---F---DYYRSCPRCS 112
+ + E + +A+ K +E ++ L S++R C+N F D R C R S
Sbjct: 321 INAEHKVEVENDAEKKEGNPAEPQIHSSELTSDDRQPCSNGRDFAVVDLQRMCTRSS 377
>UNIPROTKB|Q9Y4C1 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001047 "core promoter binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007290 "spermatid nucleus elongation"
evidence=IEA] [GO:0036123 "histone H3-K9 dimethylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051573
"negative regulation of histone H3-K9 methylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009755 "hormone-mediated signaling pathway" evidence=IDA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IDA]
[GO:0033169 "histone H3-K9 demethylation" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0046293 "formaldehyde biosynthetic process" evidence=IDA]
[GO:0050681 "androgen receptor binding" evidence=IDA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 EMBL:CH471053
GO:GO:0030154 GO:GO:0030521 GO:GO:0005506 GO:GO:0007283
GO:GO:0006351 GO:GO:0016702 GO:GO:0009755 GO:GO:0033169
Pathway_Interaction_DB:ar_pathway GO:GO:0050681 EMBL:AC068288
eggNOG:NOG305537 CTD:55818 KO:K15601 OrthoDB:EOG4FFD0Z
EMBL:AB018285 EMBL:AL832150 EMBL:BX640698 EMBL:CR749581
IPI:IPI00479545 RefSeq:NP_001140160.1 RefSeq:NP_060903.2
UniGene:Hs.557425 ProteinModelPortal:Q9Y4C1 IntAct:Q9Y4C1
STRING:Q9Y4C1 PhosphoSite:Q9Y4C1 DMDM:308153659 PaxDb:Q9Y4C1
PRIDE:Q9Y4C1 Ensembl:ENST00000312912 Ensembl:ENST00000409064
Ensembl:ENST00000409556 GeneID:55818 KEGG:hsa:55818 UCSC:uc002sri.4
GeneCards:GC02P086667 H-InvDB:HIX0002238 HGNC:HGNC:20815 MIM:611512
neXtProt:NX_Q9Y4C1 PharmGKB:PA164721293 InParanoid:Q9Y4C1
BindingDB:Q9Y4C1 ChEMBL:CHEMBL1938209 ChiTaRS:KDM3A
GenomeRNAi:55818 NextBio:61002 ArrayExpress:Q9Y4C1 Bgee:Q9Y4C1
CleanEx:HS_JMJD1A Genevestigator:Q9Y4C1 GermOnline:ENSG00000115548
GO:GO:0046293 Uniprot:Q9Y4C1
Length = 1321
Score = 322 (118.4 bits), Expect = 6.1e-49, Sum P(3) = 6.1e-49
Identities = 69/158 (43%), Positives = 98/158 (62%)
Query: 502 KSEEKLRPISSMQSNTLSLN----GKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYC 556
+ EE L+ I S+ L++ GK+ GALW I+ +D K+ E+L+ +E
Sbjct: 1142 QEEEVLKTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE-- 1199
Query: 557 SPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSC 616
+P + PIHDQ++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC
Sbjct: 1200 NPADH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSC 1257
Query: 617 TKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
K+A DFVSPE++ C LT EFR L + H +DKLQ
Sbjct: 1258 IKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQ 1295
Score = 238 (88.8 bits), Expect = 6.1e-49, Sum P(3) = 6.1e-49
Identities = 67/213 (31%), Positives = 105/213 (49%)
Query: 264 DNYLYCPSATDVQHESLEH-FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYS 322
DN L C D ++S + F+ W +G+PV+++ V + W+P S+
Sbjct: 948 DNRLLC--LQDPNNKSNWNVFRECWKQGQPVMVSGVHHKLNSELWKP---------ESFR 996
Query: 323 KGSQKLVVKTVDCLDLCEVKINTY-QFFKAYME--GRTHSNSWPVILKLKDWPPSCLFEE 379
K + V V+C + T F+ + + R + P++LKLKDWPP F +
Sbjct: 997 KEFGEQEVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRD 1056
Query: 380 RLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDS 439
+P + M +P +YT G LN+A++LP F++PDLGPK Y AYG+ R
Sbjct: 1057 MMPSRFDDLMANIPLPEYTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYG 1115
Query: 440 VTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEK 472
T LH D+SDA NV+++ +Q E+ K
Sbjct: 1116 TTNLHLDVSDAANVMVYVGIPKGQCEQEEEVLK 1148
Score = 84 (34.6 bits), Expect = 6.1e-49, Sum P(3) = 6.1e-49
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPS 156
F+ + CPRC + +C+ C R R C QG S K+ +H E+L +P+
Sbjct: 670 FNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWLKCVKSQIHEPENL-MPT 723
>UNIPROTKB|E1BFC2 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:DAAA02031122
IPI:IPI00709258 RefSeq:NP_001179801.1 UniGene:Bt.52403 PRIDE:E1BFC2
Ensembl:ENSBTAT00000018069 GeneID:536073 KEGG:bta:536073
NextBio:20876880 Uniprot:E1BFC2
Length = 1320
Score = 322 (118.4 bits), Expect = 2.0e-48, Sum P(3) = 2.0e-48
Identities = 69/158 (43%), Positives = 98/158 (62%)
Query: 502 KSEEKLRPISSMQSNTLSLN----GKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYC 556
+ EE L+ I S+ L++ GK+ GALW I+ +D K+ E+L+ +E
Sbjct: 1141 QEEEVLKTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE-- 1198
Query: 557 SPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSC 616
+P + PIHDQ++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC
Sbjct: 1199 NPADH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSC 1256
Query: 617 TKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
K+A DFVSPE++ C LT EFR L + H +DKLQ
Sbjct: 1257 IKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQ 1294
Score = 237 (88.5 bits), Expect = 2.0e-48, Sum P(3) = 2.0e-48
Identities = 68/213 (31%), Positives = 105/213 (49%)
Query: 264 DNYLYCPSATDVQHESLEH-FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYS 322
DN L C D ++S + F+ W +G+PV+++ V + W+P R
Sbjct: 947 DNRLLC--LQDPNNKSNWNVFRECWKQGQPVMVSGVHHKLNTELWKPESFRREF------ 998
Query: 323 KGSQKLVVKTVDCLDLCEVKINTY-QFFKAYME--GRTHSNSWPVILKLKDWPPSCLFEE 379
G+Q+ V V+C + T F+ + + R + P++LKLKDWPP F +
Sbjct: 999 -GNQE--VDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRD 1055
Query: 380 RLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDS 439
+P + M +P +YT G LN+A++LP F++PDLGPK Y AYG+ R
Sbjct: 1056 MMPSRFDDLMANIPLPEYTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYG 1114
Query: 440 VTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEK 472
T LH D+SDA NV+++ Q E+ K
Sbjct: 1115 TTNLHLDVSDAANVMVYVGIPKGQCDQEEEVLK 1147
Score = 80 (33.2 bits), Expect = 2.0e-48, Sum P(3) = 2.0e-48
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPS 156
F+ + CPRC + +C+ C R R C QG + K+ +H E+L +P+
Sbjct: 669 FNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFNWLRCVKSQIHEPENL-MPT 722
Score = 42 (19.8 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 394 YKDYTHPYSGILNIATKLPPDFL--KPDLGPKAYIAYGVAEELGRGDSVT 441
+K S LN TK P+ L KPD+ K + + ++G GD T
Sbjct: 335 HKQILPELSSCLN--TK--PEILRTKPDVACKVDLLSSKSSQIGTGDLKT 380
>UNIPROTKB|F1SVC8 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:CU467088 EMBL:CU928755
RefSeq:XP_003124983.3 Ensembl:ENSSSCT00000009003 GeneID:100517522
KEGG:ssc:100517522 Uniprot:F1SVC8
Length = 1323
Score = 322 (118.4 bits), Expect = 2.0e-48, Sum P(3) = 2.0e-48
Identities = 69/158 (43%), Positives = 98/158 (62%)
Query: 502 KSEEKLRPISSMQSNTLSLN----GKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYC 556
+ EE L+ I S+ L++ GK+ GALW I+ +D K+ E+L+ +E
Sbjct: 1144 QEEEVLKTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE-- 1201
Query: 557 SPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSC 616
+P + PIHDQ++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC
Sbjct: 1202 NPADH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSC 1259
Query: 617 TKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
K+A DFVSPE++ C LT EFR L + H +DKLQ
Sbjct: 1260 IKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQ 1297
Score = 234 (87.4 bits), Expect = 2.0e-48, Sum P(3) = 2.0e-48
Identities = 67/213 (31%), Positives = 105/213 (49%)
Query: 264 DNYLYCPSATDVQHESLEH-FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYS 322
DN L C D ++S + F+ W +G+PV+++ V + W+P +
Sbjct: 950 DNRLLC--LQDPNNKSNWNVFRECWKQGQPVMVSGVHHKLNTELWKPESFRKEF------ 1001
Query: 323 KGSQKLVVKTVDCLDLCEVKINTY-QFFKAYME--GRTHSNSWPVILKLKDWPPSCLFEE 379
G+Q+ V V+C + T F+ + + R + P++LKLKDWPP F +
Sbjct: 1002 -GNQE--VDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRD 1058
Query: 380 RLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDS 439
+P + M +P +YT G LN+A++LP F++PDLGPK Y AYG+ R
Sbjct: 1059 MMPSRFDDLMANIPLPEYTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYG 1117
Query: 440 VTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEK 472
T LH D+SDA NV+++ Q E+ K
Sbjct: 1118 TTNLHLDVSDAANVMVYVGIPKGQCDQEEEVLK 1150
Score = 83 (34.3 bits), Expect = 2.0e-48, Sum P(3) = 2.0e-48
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPS 156
F+ + CPRC + +C+ C R R C QG S K+ +H E+L +P+
Sbjct: 672 FNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWLRCVKSQIHEPENL-MPT 725
>UNIPROTKB|E2QWU9 [details] [associations]
symbol:KDM3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046293 "formaldehyde biosynthetic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0033169 "histone H3-K9
demethylation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA] [GO:0009755 "hormone-mediated
signaling pathway" evidence=IEA] [GO:0007290 "spermatid nucleus
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039 CTD:55818
KO:K15601 GO:GO:0046293 OMA:RRLQFNK EMBL:AAEX03010929
RefSeq:XP_532973.3 Ensembl:ENSCAFT00000012063 GeneID:475763
KEGG:cfa:475763 NextBio:20851540 Uniprot:E2QWU9
Length = 1322
Score = 322 (118.4 bits), Expect = 2.6e-48, Sum P(3) = 2.6e-48
Identities = 69/158 (43%), Positives = 98/158 (62%)
Query: 502 KSEEKLRPISSMQSNTLSLN----GKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYC 556
+ EE L+ I S+ L++ GK+ GALW I+ +D K+ E+L+ +E
Sbjct: 1143 QEEEVLKTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE-- 1200
Query: 557 SPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSC 616
+P + PIHDQ++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC
Sbjct: 1201 NPADH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSC 1258
Query: 617 TKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
K+A DFVSPE++ C LT EFR L + H +DKLQ
Sbjct: 1259 IKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQ 1296
Score = 233 (87.1 bits), Expect = 2.6e-48, Sum P(3) = 2.6e-48
Identities = 67/213 (31%), Positives = 105/213 (49%)
Query: 264 DNYLYCPSATDVQHESLEH-FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYS 322
DN L C D ++S + F+ W +G+PV+++ V + W+P +
Sbjct: 949 DNRLLC--LQDPNNKSNWNVFRECWKQGQPVMVSGVHHKLNTDLWKPESFRKEF------ 1000
Query: 323 KGSQKLVVKTVDCLDLCEVKINTY-QFFKAYME--GRTHSNSWPVILKLKDWPPSCLFEE 379
G+Q+ V V+C + T F+ + + R + P++LKLKDWPP F +
Sbjct: 1001 -GNQE--VDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRD 1057
Query: 380 RLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDS 439
+P + M +P +YT G LN+A++LP F++PDLGPK Y AYG+ R
Sbjct: 1058 MMPSRFDDLMANIPLPEYTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYG 1116
Query: 440 VTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEK 472
T LH D+SDA NV+++ Q E+ K
Sbjct: 1117 TTNLHLDVSDAANVMVYVGIPKGQCDQEEEVLK 1149
Score = 83 (34.3 bits), Expect = 2.6e-48, Sum P(3) = 2.6e-48
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPS 156
F+ + CPRC + +C+ C R R C QG S K+ +H E+L +P+
Sbjct: 671 FNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWLRCVKSQIHEPENL-MPT 724
>RGD|708351 [details] [associations]
symbol:Kdm3a "lysine (K)-specific demethylase 3A" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005506 "iron ion
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0007290 "spermatid nucleus
elongation" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009755 "hormone-mediated signaling pathway"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030521 "androgen receptor signaling pathway"
evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0036123 "histone H3-K9 dimethylation"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046293 "formaldehyde biosynthetic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 RGD:708351 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0007283 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
eggNOG:NOG305537 CTD:55818 HOGENOM:HOG000007471 KO:K15601
EMBL:X59993 IPI:IPI00566177 PIR:S28499 RefSeq:NP_786940.1
UniGene:Rn.10541 ProteinModelPortal:Q63679 STRING:Q63679
PRIDE:Q63679 GeneID:312440 KEGG:rno:312440 UCSC:RGD:708351
NextBio:664882 ArrayExpress:Q63679 Genevestigator:Q63679
GermOnline:ENSRNOG00000007814 Uniprot:Q63679
Length = 1214
Score = 324 (119.1 bits), Expect = 7.0e-48, Sum P(3) = 7.0e-48
Identities = 70/158 (44%), Positives = 98/158 (62%)
Query: 502 KSEEKLRPISSMQSNTLSLN----GKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYC 556
+ EE LR I S+ L++ GK+ GALW I+ +D K+ E+L+ +E
Sbjct: 1028 QEEEVLRTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE-- 1085
Query: 557 SPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSC 616
+P + PIHDQ++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC
Sbjct: 1086 NPADH--DPIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSC 1143
Query: 617 TKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
K+A DFVSPE++ C LT EFR L + H +DKLQ
Sbjct: 1144 IKVAEDFVSPEHVKHCFWLTQEFRHLSQTHTNHEDKLQ 1181
Score = 226 (84.6 bits), Expect = 7.0e-48, Sum P(3) = 7.0e-48
Identities = 70/224 (31%), Positives = 109/224 (48%)
Query: 264 DNYLYCPSATDVQHESLEH-FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYS 322
DN L C D ++S + F+ W +G+PV+++ V + W+P S+
Sbjct: 832 DNRLLC--LQDPNNKSNWNVFRECWKQGQPVMVSGVHHKLNTELWKP---------ESFR 880
Query: 323 KGSQKLVVKTVDCLDLCEVKINTY-QFFKAYMEG----RTHSNSWPVILKLKDWPPSCLF 377
K + V V+C + T F+ + + + P++LKLKDWPP F
Sbjct: 881 KEFGEQEVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDF 940
Query: 378 EERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRG 437
+ +P + M +P +YT G LN+A++LP F++PDLGPK Y AYG+ R
Sbjct: 941 RDMMPSRFDDLMANIPLPEYTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRK 999
Query: 438 DSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQD 481
T LH D+SDA NV+++ V Q + E++ R IQD
Sbjct: 1000 YGTTNLHLDVSDAANVMVY---VGIPKGQCEQEEEVLR--TIQD 1038
Score = 82 (33.9 bits), Expect = 7.0e-48, Sum P(3) = 7.0e-48
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPS 156
F+ + CPRC + +C+ C R R C QG S K+ +H E+L +P+
Sbjct: 554 FNLHWVCPRCGFGVCVDCYRLKRKNCQQGAAYKTFSWIRCVKSQIHEPENL-MPT 607
>MGI|MGI:98847 [details] [associations]
symbol:Kdm3a "lysine (K)-specific demethylase 3A"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005506 "iron ion binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007290 "spermatid
nucleus elongation" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=ISO] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0036123 "histone H3-K9
dimethylation" evidence=IMP;IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046293 "formaldehyde biosynthetic
process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:98847 GO:GO:0005634 GO:GO:0005737
GO:GO:0030521 GO:GO:0005506 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0001047 GO:GO:0009755
GO:GO:0033169 GO:GO:0000976 GO:GO:0051573 GO:GO:0007290
GeneTree:ENSGT00530000063039 eggNOG:NOG305537 CTD:55818 KO:K15601
OrthoDB:EOG4FFD0Z GO:GO:0046293 EMBL:AK129204 EMBL:BC026605
EMBL:BC031158 EMBL:BC031200 EMBL:BC059264 EMBL:AK144825
EMBL:AK166797 EMBL:DQ323991 IPI:IPI00460716 IPI:IPI00755968
RefSeq:NP_001033784.2 RefSeq:NP_766589.1 UniGene:Mm.260479
ProteinModelPortal:Q6PCM1 IntAct:Q6PCM1 STRING:Q6PCM1
PhosphoSite:Q6PCM1 PaxDb:Q6PCM1 PRIDE:Q6PCM1
Ensembl:ENSMUST00000065509 Ensembl:ENSMUST00000167220 GeneID:104263
KEGG:mmu:104263 UCSC:uc009cgy.2 InParanoid:Q6PCM1 OMA:RRLQFNK
NextBio:356834 Bgee:Q6PCM1 CleanEx:MM_JMJD1A Genevestigator:Q6PCM1
GermOnline:ENSMUSG00000053470 GO:GO:0036123 Uniprot:Q6PCM1
Length = 1323
Score = 324 (119.1 bits), Expect = 1.0e-47, Sum P(3) = 1.0e-47
Identities = 70/158 (44%), Positives = 98/158 (62%)
Query: 502 KSEEKLRPISSMQSNTLSLN----GKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYC 556
+ EE LR I S+ L++ GK+ GALW I+ +D K+ E+L+ +E
Sbjct: 1144 QEEEVLRTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEE--QGQD 1201
Query: 557 SPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSC 616
+P + PIHDQ++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC
Sbjct: 1202 NPADH--DPIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSC 1259
Query: 617 TKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
K+A DFVSPE++ C LT EFR L + H +DKLQ
Sbjct: 1260 IKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQ 1297
Score = 225 (84.3 bits), Expect = 1.0e-47, Sum P(3) = 1.0e-47
Identities = 70/224 (31%), Positives = 109/224 (48%)
Query: 264 DNYLYCPSATDVQHESLEH-FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYS 322
DN L C D ++S + F+ W +G+PV+++ V + W+P S+
Sbjct: 948 DNRLLC--LQDPNNKSNWNVFRECWKQGQPVMVSGVHHKLNTELWKP---------ESFR 996
Query: 323 KGSQKLVVKTVDCLDLCEVKINTY-QFFKAYMEG----RTHSNSWPVILKLKDWPPSCLF 377
K + V V+C + T F+ + + + P++LKLKDWPP F
Sbjct: 997 KEFGEQEVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDF 1056
Query: 378 EERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRG 437
+ +P + M +P +YT G LN+A++LP F++PDLGPK Y AYG+ R
Sbjct: 1057 RDMMPSRFDDLMANIPLPEYTRR-DGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRK 1115
Query: 438 DSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQD 481
T LH D+SDA NV+++ V Q + E++ R IQD
Sbjct: 1116 YGTTNLHLDVSDAANVMVY---VGIPKGQCEQEEEVLR--TIQD 1154
Score = 83 (34.3 bits), Expect = 1.0e-47, Sum P(3) = 1.0e-47
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPS 156
F+ + CPRC + +C+ C R R C QG S K+ +H E+L +P+
Sbjct: 670 FNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWIRCVKSQIHEPENL-MPT 723
>MGI|MGI:1923356 [details] [associations]
symbol:Kdm3b "KDM3B lysine (K)-specific demethylase 3B"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 MGI:MGI:1923356 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 eggNOG:NOG305537 OrthoDB:EOG4W9J32 EMBL:AK129281
EMBL:BC031981 EMBL:BC038376 EMBL:BC060727 EMBL:BC108415
EMBL:AK018027 EMBL:AK033343 IPI:IPI00664808 IPI:IPI00757477
UniGene:Mm.277906 ProteinModelPortal:Q6ZPY7 STRING:Q6ZPY7
PhosphoSite:Q6ZPY7 PaxDb:Q6ZPY7 PRIDE:Q6ZPY7 CleanEx:MM_JMJD1B
Genevestigator:Q6ZPY7 GermOnline:ENSMUSG00000038773 Uniprot:Q6ZPY7
Length = 1562
Score = 322 (118.4 bits), Expect = 1.4e-47, Sum P(3) = 1.4e-47
Identities = 67/135 (49%), Positives = 88/135 (65%)
Query: 521 NGKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKK 579
+GK+ GALW I+ +D K+ E LR +E +P + PIHDQ++YL+ +K
Sbjct: 1406 DGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQE--NPPDH--DPIHDQSWYLDQILRK 1461
Query: 580 KLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEF 639
+L EE+GV+ W+ VQ LG+AV IPAG PHQV NL SC K+A DFVSPE++ C RLT EF
Sbjct: 1462 RLFEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEF 1521
Query: 640 RTLPRNHRAKKDKLQ 654
R L H +DKLQ
Sbjct: 1522 RHLSNTHTNHEDKLQ 1536
Score = 264 (98.0 bits), Expect = 1.4e-47, Sum P(3) = 1.4e-47
Identities = 59/175 (33%), Positives = 92/175 (52%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PV+++ V W+P S+ D +V +C + +VK
Sbjct: 1206 FRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVD------LVNCRNCAIISDVK 1259
Query: 343 INTY-QFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPY 401
+ + F+ + + P++LKLKDWPP F + +P + M LP +YT
Sbjct: 1260 VRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKR- 1318
Query: 402 SGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMH 456
G LN+A++LP F++PDLGPK Y AYG+ R T LH D+SDAVNV+++
Sbjct: 1319 DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVY 1373
Score = 48 (22.0 bits), Expect = 1.4e-47, Sum P(3) = 1.4e-47
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 102 FDYYRSCPRCSYDLCLTCCR 121
F+ + C +C + +CL C R
Sbjct: 840 FNIHWVCRKCGFGVCLDCYR 859
Score = 38 (18.4 bits), Expect = 1.5e-46, Sum P(3) = 1.5e-46
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 248 CCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVI 294
C S+++ VS++ S+ D +SLE S KG V+
Sbjct: 330 CMSQNVPSTNYLSRVSESVADDSSSRDSFTQSLESLTSGLCKGRSVL 376
>UNIPROTKB|E1BE97 [details] [associations]
symbol:LOC100848816 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 KO:K15601 OMA:IICKRLR
EMBL:DAAA02020398 IPI:IPI00825479 RefSeq:XP_003582470.1
RefSeq:XP_003586349.1 Ensembl:ENSBTAT00000013278 GeneID:100848816
KEGG:bta:100848816 Uniprot:E1BE97
Length = 1759
Score = 322 (118.4 bits), Expect = 2.2e-47, Sum P(3) = 2.2e-47
Identities = 67/135 (49%), Positives = 88/135 (65%)
Query: 521 NGKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKK 579
+GK+ GALW I+ +D K+ E LR +E +P + PIHDQ++YL+ +K
Sbjct: 1603 DGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQE--NPPDH--DPIHDQSWYLDQTLRK 1658
Query: 580 KLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEF 639
+L EE+GV+ W+ VQ LG+AV IPAG PHQV NL SC K+A DFVSPE++ C RLT EF
Sbjct: 1659 RLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEF 1718
Query: 640 RTLPRNHRAKKDKLQ 654
R L H +DKLQ
Sbjct: 1719 RHLSNTHTNHEDKLQ 1733
Score = 264 (98.0 bits), Expect = 2.2e-47, Sum P(3) = 2.2e-47
Identities = 59/175 (33%), Positives = 92/175 (52%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PV+++ V W+P S+ D +V +C + +VK
Sbjct: 1403 FRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVD------LVNCRNCAIISDVK 1456
Query: 343 INTY-QFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPY 401
+ + F+ + + P++LKLKDWPP F + +P + M LP +YT
Sbjct: 1457 VRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKR- 1515
Query: 402 SGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMH 456
G LN+A++LP F++PDLGPK Y AYG+ R T LH D+SDAVNV+++
Sbjct: 1516 DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVY 1570
Score = 48 (22.0 bits), Expect = 2.2e-47, Sum P(3) = 2.2e-47
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 102 FDYYRSCPRCSYDLCLTCCR 121
F+ + C +C + +CL C R
Sbjct: 1037 FNIHWVCRKCGFGVCLDCYR 1056
>UNIPROTKB|Q7LBC6 [details] [associations]
symbol:KDM3B "Lysine-specific demethylase 3B" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 EMBL:CH471062 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 eggNOG:NOG305537 KO:K15601
EMBL:AF251039 EMBL:AF338242 EMBL:AB029005 EMBL:AC104116
EMBL:AC113403 EMBL:BC000539 EMBL:BC001202 EMBL:BC146788
IPI:IPI00298935 IPI:IPI00748132 IPI:IPI00749486 RefSeq:NP_057688.2
UniGene:Hs.483486 ProteinModelPortal:Q7LBC6 IntAct:Q7LBC6
MINT:MINT-1195273 STRING:Q7LBC6 PhosphoSite:Q7LBC6 DMDM:308153456
PaxDb:Q7LBC6 PRIDE:Q7LBC6 Ensembl:ENST00000314358
Ensembl:ENST00000394866 GeneID:51780 KEGG:hsa:51780 UCSC:uc003lcy.1
UCSC:uc010jew.1 CTD:51780 GeneCards:GC05P137688 HGNC:HGNC:1337
HPA:HPA016610 MIM:609373 neXtProt:NX_Q7LBC6 PharmGKB:PA25918
InParanoid:Q7LBC6 OMA:IICKRLR OrthoDB:EOG4W9J32 GenomeRNAi:51780
NextBio:55912 ArrayExpress:Q7LBC6 Bgee:Q7LBC6 CleanEx:HS_JMJD1B
Genevestigator:Q7LBC6 GermOnline:ENSG00000120733 Uniprot:Q7LBC6
Length = 1761
Score = 322 (118.4 bits), Expect = 2.2e-47, Sum P(3) = 2.2e-47
Identities = 67/135 (49%), Positives = 88/135 (65%)
Query: 521 NGKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKK 579
+GK+ GALW I+ +D K+ E LR +E +P + PIHDQ++YL+ +K
Sbjct: 1605 DGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQE--NPPDH--DPIHDQSWYLDQTLRK 1660
Query: 580 KLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEF 639
+L EE+GV+ W+ VQ LG+AV IPAG PHQV NL SC K+A DFVSPE++ C RLT EF
Sbjct: 1661 RLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEF 1720
Query: 640 RTLPRNHRAKKDKLQ 654
R L H +DKLQ
Sbjct: 1721 RHLSNTHTNHEDKLQ 1735
Score = 264 (98.0 bits), Expect = 2.2e-47, Sum P(3) = 2.2e-47
Identities = 59/175 (33%), Positives = 92/175 (52%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PV+++ V W+P S+ D +V +C + +VK
Sbjct: 1405 FRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVD------LVNCRNCAIISDVK 1458
Query: 343 INTY-QFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPY 401
+ + F+ + + P++LKLKDWPP F + +P + M LP +YT
Sbjct: 1459 VRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKR- 1517
Query: 402 SGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMH 456
G LN+A++LP F++PDLGPK Y AYG+ R T LH D+SDAVNV+++
Sbjct: 1518 DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVY 1572
Score = 48 (22.0 bits), Expect = 2.2e-47, Sum P(3) = 2.2e-47
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 102 FDYYRSCPRCSYDLCLTCCR 121
F+ + C +C + +CL C R
Sbjct: 1039 FNIHWVCRKCGFGVCLDCYR 1058
Score = 43 (20.2 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 248 CCSKSLRKAASREGVSDNYLYCPSATDVQHESLEHFKSHWIKGEPVIITN 297
C S++L + VS++ S+ D +SLE S KG V+ T+
Sbjct: 529 CMSQTLPTSNYFTTVSESLADDSSSRDSFKQSLESLSSGLCKGRSVLGTD 578
>UNIPROTKB|F1RH75 [details] [associations]
symbol:KDM3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 OMA:IICKRLR EMBL:CU856219
EMBL:CU928408 Ensembl:ENSSSCT00000015658 Uniprot:F1RH75
Length = 1766
Score = 322 (118.4 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 67/135 (49%), Positives = 88/135 (65%)
Query: 521 NGKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKK 579
+GK+ GALW I+ +D K+ E LR +E +P + PIHDQ++YL+ +K
Sbjct: 1610 DGKEKPGALWHIYAAKDAEKIRELLRKVGEEQGQE--NPPDH--DPIHDQSWYLDQTLRK 1665
Query: 580 KLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEF 639
+L EE+GV+ W+ VQ LG+AV IPAG PHQV NL SC K+A DFVSPE++ C RLT EF
Sbjct: 1666 RLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEF 1725
Query: 640 RTLPRNHRAKKDKLQ 654
R L H +DKLQ
Sbjct: 1726 RHLSNTHTNHEDKLQ 1740
Score = 264 (98.0 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 59/175 (33%), Positives = 92/175 (52%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PV+++ V W+P S+ D +V +C + +VK
Sbjct: 1411 FRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVD------LVNCRNCAIISDVK 1464
Query: 343 INTY-QFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPY 401
+ + F+ + + P++LKLKDWPP F + +P + M LP +YT
Sbjct: 1465 VRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKR- 1523
Query: 402 SGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMH 456
G LN+A++LP F++PDLGPK Y AYG+ R T LH D+SDAVNV+++
Sbjct: 1524 DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVY 1578
Score = 48 (22.0 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 102 FDYYRSCPRCSYDLCLTCCR 121
F+ + C +C + +CL C R
Sbjct: 1045 FNIHWVCRKCGFGVCLDCYR 1064
>UNIPROTKB|F1NJZ2 [details] [associations]
symbol:KDM3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GeneTree:ENSGT00530000063039 OMA:IICKRLR EMBL:AADN02028186
EMBL:AADN02028187 EMBL:AADN02028188 IPI:IPI00589441
Ensembl:ENSGALT00000012413 Uniprot:F1NJZ2
Length = 1755
Score = 316 (116.3 bits), Expect = 2.2e-46, Sum P(3) = 2.2e-46
Identities = 64/129 (49%), Positives = 84/129 (65%)
Query: 526 GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEF 585
GALW I+ +D K+ E LR +E +P + PIHDQ++YL+ +K+L +E+
Sbjct: 1605 GALWHIYAAKDAEKIRELLRKVGEEQGQE--NPPDH--DPIHDQSWYLDQTLRKRLYDEY 1660
Query: 586 GVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRN 645
GV+ W+ VQ LG+AV IPAG PHQV NL SC K+A DFVSPE++ C RLT EFR L
Sbjct: 1661 GVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNT 1720
Query: 646 HRAKKDKLQ 654
H +DKLQ
Sbjct: 1721 HTNHEDKLQ 1729
Score = 261 (96.9 bits), Expect = 2.2e-46, Sum P(3) = 2.2e-46
Identities = 59/175 (33%), Positives = 91/175 (52%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PV+++ V W+P S D +V +C + +VK
Sbjct: 1399 FRECWKQGQPVLVSGVHKKLKSELWKPEAFSLEFGDQDVD------LVNCRNCAIISDVK 1452
Query: 343 INTY-QFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPY 401
+ + F+ + + P++LKLKDWPP F + +P + M LP +YT
Sbjct: 1453 VRDFWDGFEIISKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKR- 1511
Query: 402 SGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMH 456
G LN+A++LP F++PDLGPK Y AYG+ R T LH D+SDAVNV+++
Sbjct: 1512 DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVY 1566
Score = 48 (22.0 bits), Expect = 2.2e-46, Sum P(3) = 2.2e-46
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 102 FDYYRSCPRCSYDLCLTCCR 121
F+ + C +C + +CL C R
Sbjct: 1033 FNIHWVCRKCGFGVCLDCYR 1052
>UNIPROTKB|Q5ZIX8 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000433
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00291
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 eggNOG:NOG305537 EMBL:AJ720656 IPI:IPI00821166
RefSeq:NP_001012909.1 UniGene:Gga.17648 ProteinModelPortal:Q5ZIX8
GeneID:422917 KEGG:gga:422917 CTD:55818 HOGENOM:HOG000007471
KO:K15601 OrthoDB:EOG4FFD0Z NextBio:20825473 Uniprot:Q5ZIX8
Length = 1325
Score = 317 (116.6 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 68/158 (43%), Positives = 97/158 (61%)
Query: 502 KSEEKLRPISSMQSNTLSL-----NGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYC 556
+ EE L+ I S+ L++ + + GALW I+ +D K+ E+L+ +E
Sbjct: 1146 QEEEVLKTIQDGDSDELTIKRFTESREKPGALWHIYAAKDTEKIREFLKKVAEEQGQE-- 1203
Query: 557 SPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSC 616
+PV+ PIHDQ++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC
Sbjct: 1204 NPVDH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSC 1261
Query: 617 TKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
K+A DFVSPE++ C LT EFR L H +DKLQ
Sbjct: 1262 IKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQ 1299
Score = 236 (88.1 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 68/214 (31%), Positives = 104/214 (48%)
Query: 264 DNYLYCPSATDVQHESLEH-FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYS 322
DN L C D +ES + F+ W +G+PV+++ V + W P S+
Sbjct: 951 DNRLLC--LQDPNNESNWNVFRECWKQGQPVMVSGVHHKLNADLWRP---------ESFR 999
Query: 323 KGSQKLVVKTVDCLDLCEVKINTY-QFFKAY--MEGRTHSNSW-PVILKLKDWPPSCLFE 378
K + V V+C + T F+ + + R + P++LKLKDWPP F
Sbjct: 1000 KEFGQQEVDLVNCRTNEIITGATVGDFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDFR 1059
Query: 379 ERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGD 438
+ +P + M +P +YT G LN+A++LP F++PDLGPK Y AYG+ R
Sbjct: 1060 DMMPSRFDDLMKNIPLPEYTRR-GGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKY 1118
Query: 439 SVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEK 472
T LH D+SDA NV+++ + Q E+ K
Sbjct: 1119 GTTNLHLDVSDAANVMVYVGIPKGQADQEEEVLK 1152
Score = 49 (22.3 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 108 CPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPS 156
C +C + +C+ C R + G + + S F K H E+L +P+
Sbjct: 683 CSKCGFGVCVDCYRMRKKGIHEDDDSDTFSWFKCVKGQEHEPENL-MPT 730
>FB|FBgn0037703 [details] [associations]
symbol:JHDM2 "JmjC domain-containing histone demethylase 2"
species:7227 "Drosophila melanogaster" [GO:2001020 "regulation of
response to DNA damage stimulus" evidence=IGI] [GO:0005634
"nucleus" evidence=ISM] [GO:0032452 "histone demethylase activity"
evidence=ISM] [GO:0016577 "histone demethylation" evidence=ISM]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
EMBL:AE014297 GO:GO:0005634 GeneTree:ENSGT00530000063039
eggNOG:NOG305537 GO:GO:0032452 KO:K15601 EMBL:BT003787
RefSeq:NP_788611.1 UniGene:Dm.26190 MINT:MINT-1601605
EnsemblMetazoa:FBtr0082063 GeneID:41143 KEGG:dme:Dmel_CG8165
UCSC:CG8165-RA CTD:41143 FlyBase:FBgn0037703 InParanoid:Q9VHC5
OMA:SHTNHED OrthoDB:EOG4XPNWR GenomeRNAi:41143 NextBio:822388
Uniprot:Q9VHC5
Length = 854
Score = 283 (104.7 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 64/131 (48%), Positives = 79/131 (60%)
Query: 526 GALWDIFRREDVPKLGEYLRNH--HKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKE 583
GALW IF D K+ + L K FR +E PIHDQ +YL+ + +L +
Sbjct: 696 GALWHIFPARDADKIRDLLNRVTLEKGFR------LEPDHDPIHDQNWYLDDKLRARLFK 749
Query: 584 EFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLP 643
E+GVE VQ LG+AV IPAG PHQV+NL +C K+A DFVSPENI C LT EFR L
Sbjct: 750 EYGVEGHPIVQCLGDAVFIPAGAPHQVQNLHNCIKVAEDFVSPENITHCYHLTHEFRRLS 809
Query: 644 RNHRAKKDKLQ 654
+H +DKLQ
Sbjct: 810 HSHTNHEDKLQ 820
Score = 232 (86.7 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 66/186 (35%), Positives = 97/186 (52%)
Query: 273 TDVQH-ESLEHFKSHWIKGEPVIITNVLDYSSGLS-WEPMVMSRAVRDTSYSKGSQKLVV 330
TD H ++ F+ W G+PV+I+ V S L W P R D K + +
Sbjct: 479 TDAMHPDNRVLFQEVWKCGQPVMISEVAR-SLNLDLWHPQAFCRDFGD----KPNDLINC 533
Query: 331 KTVDCLDLCEVKINTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMN 390
+ + ++ + ++ F+ + + P++LKLKDWPP F E LP A+ M
Sbjct: 534 LNGNLVPNQPMR-HFWEGFQCMTKRLPDAYGKPMLLKLKDWPPGDDFAEILPTRFADLMK 592
Query: 391 ILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDA 450
LP +YT +G LNIA+ LP F+ PDLGPK Y AYG A +G T LH D+SDA
Sbjct: 593 GLPMPEYTLR-TGNLNIASCLPKMFVPPDLGPKMYNAYGSALHPDKG--TTNLHLDISDA 649
Query: 451 VNVLMH 456
VN++++
Sbjct: 650 VNIMVY 655
Score = 66 (28.3 bits), Expect = 7.1e-43, Sum P(3) = 7.1e-43
Identities = 8/25 (32%), Positives = 18/25 (72%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDG 126
F+Y+ +C +C + +CL C ++ ++G
Sbjct: 251 FNYHWTCRKCGFGVCLDCVKDRKEG 275
Score = 38 (18.4 bits), Expect = 9.2e-23, Sum P(3) = 9.2e-23
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 431 AEELGRGDSVTKLHCDMSDAV-NVLMH 456
A E+G D +T+ C D + L H
Sbjct: 674 AIEIGGCDYITRARCQSPDVLPGALWH 700
>UNIPROTKB|E1C232 [details] [associations]
symbol:KDM3A "Lysine-specific demethylase 3A" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007290
"spermatid nucleus elongation" evidence=IEA] [GO:0009755
"hormone-mediated signaling pathway" evidence=IEA] [GO:0030521
"androgen receptor signaling pathway" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IEA] [GO:0036123 "histone
H3-K9 dimethylation" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046293 "formaldehyde biosynthetic process" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0051573
"negative regulation of histone H3-K9 methylation" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0045893 GO:GO:0030521 GO:GO:0005506
GO:GO:0009755 GO:GO:0033169 GeneTree:ENSGT00530000063039
GO:GO:0046293 OMA:RRLQFNK EMBL:AADN02014773 IPI:IPI00586981
Ensembl:ENSGALT00000025482 ArrayExpress:E1C232 Uniprot:E1C232
Length = 1333
Score = 299 (110.3 bits), Expect = 9.5e-43, Sum P(3) = 9.5e-43
Identities = 68/164 (41%), Positives = 97/164 (59%)
Query: 502 KSEEKLRPISSMQSNTLSL-----NGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYC 556
+ EE L+ I S+ L++ + + GALW I+ +D K+ E+L+ +E
Sbjct: 1148 QEEEVLKTIQDGDSDELTIKRFTESREKPGALWHIYAAKDTEKIREFLKKVAEEQGQE-- 1205
Query: 557 SPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVR----- 611
+PV+ PIHDQ++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQ R
Sbjct: 1206 NPVDH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQARTTGTV 1263
Query: 612 -NLMSCTKIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
NL SC K+A DFVSPE++ C LT EFR L H +DKLQ
Sbjct: 1264 HNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQ 1307
Score = 236 (88.1 bits), Expect = 9.5e-43, Sum P(3) = 9.5e-43
Identities = 68/214 (31%), Positives = 104/214 (48%)
Query: 264 DNYLYCPSATDVQHESLEH-FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYS 322
DN L C D +ES + F+ W +G+PV+++ V + W P S+
Sbjct: 953 DNRLLC--LQDPNNESNWNVFRECWKQGQPVMVSGVHHKLNADLWRP---------ESFR 1001
Query: 323 KGSQKLVVKTVDCLDLCEVKINTY-QFFKAY--MEGRTHSNSW-PVILKLKDWPPSCLFE 378
K + V V+C + T F+ + + R + P++LKLKDWPP F
Sbjct: 1002 KEFGQQEVDLVNCRTNEIITGATVGDFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDFR 1061
Query: 379 ERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGD 438
+ +P + M +P +YT G LN+A++LP F++PDLGPK Y AYG+ R
Sbjct: 1062 DMMPSRFDDLMKNIPLPEYTRR-GGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKY 1120
Query: 439 SVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEK 472
T LH D+SDA NV+++ + Q E+ K
Sbjct: 1121 GTTNLHLDVSDAANVMVYVGIPKGQADQEEEVLK 1154
Score = 52 (23.4 bits), Expect = 9.5e-43, Sum P(3) = 9.5e-43
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESLPLPS 156
F+ + C +C + +C+ C R + G + + S F K H E+L +P+
Sbjct: 679 FNLHWVCSKCGFGVCVDCYRMRKKGIHEDDDSDTFSWFKCVKGQEHEPENL-MPT 732
>UNIPROTKB|Q15652 [details] [associations]
symbol:JMJD1C "Probable JmjC domain-containing histone
demethylation protein 2C" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0046966 "thyroid
hormone receptor binding" evidence=TAS] [GO:0005622 "intracellular"
evidence=NAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596
"blood coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005654 GO:GO:0006355
GO:GO:0046872 GO:GO:0007596 GO:GO:0006351 GO:GO:0016568
GO:GO:0016702 GO:GO:0046966 EMBL:EF068222 EMBL:BX537954
EMBL:AL713895 EMBL:AL590502 EMBL:AL607128 EMBL:AC022022
EMBL:AK027280 EMBL:AL831917 EMBL:AB037801 EMBL:L40411
IPI:IPI00384202 IPI:IPI00902772 IPI:IPI01012411 RefSeq:NP_004232.2
RefSeq:NP_116165.1 UniGene:Hs.413416 PDB:2YPD PDBsum:2YPD
ProteinModelPortal:Q15652 IntAct:Q15652 STRING:Q15652
PhosphoSite:Q15652 DMDM:85541650 PaxDb:Q15652 PRIDE:Q15652
Ensembl:ENST00000399251 Ensembl:ENST00000399262
Ensembl:ENST00000542921 GeneID:221037 KEGG:hsa:221037
UCSC:uc001jml.3 CTD:221037 GeneCards:GC10M064926 HGNC:HGNC:12313
MIM:604503 neXtProt:NX_Q15652 PharmGKB:PA128394767 eggNOG:NOG305537
HOVERGEN:HBG079631 InParanoid:Q15652 KO:K11449 OMA:YKMKHSV
OrthoDB:EOG447FS9 ChiTaRS:JMJD1C GenomeRNAi:221037 NextBio:91161
ArrayExpress:Q15652 Bgee:Q15652 CleanEx:HS_JMJD1C
Genevestigator:Q15652 GermOnline:ENSG00000171988 Uniprot:Q15652
Length = 2540
Score = 239 (89.2 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 53/129 (41%), Positives = 79/129 (61%)
Query: 526 GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEF 585
GALW I+ +DV K+ E+L+ KE + + P PI DQ++Y+N +++L EE+
Sbjct: 2388 GALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNKKLRQRLLEEY 2443
Query: 586 GVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRN 645
GV + +Q LG+A+++PAG HQV+N SC ++ DFVSPE++ E LT E R L +
Sbjct: 2444 GVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLL-KE 2502
Query: 646 HRAKKDKLQ 654
DKLQ
Sbjct: 2503 EINYDDKLQ 2511
Score = 206 (77.6 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 52/177 (29%), Positives = 83/177 (46%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
FK W +G+P +++ V + W+ S G + ++C D
Sbjct: 2182 FKECWKQGQPAVVSGVHKKMNISLWK-------AESISLDFGDHQ--ADLLNCKDSIISN 2232
Query: 343 INTYQFFKAYME-GRTHSNSW--PVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTH 399
N +F+ + E + N V+LKLKDWP F+ +P + + LP +Y +
Sbjct: 2233 ANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCN 2292
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMH 456
P G N+A+ LP F++PDLGP+ AYGV T LH ++SD VN+L++
Sbjct: 2293 P-EGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVY 2348
Score = 44 (20.5 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 102 FDYYRSCPRCSYDLCLTC 119
F+ + C +C + +CL C
Sbjct: 1854 FNIHWVCQKCGFVVCLDC 1871
Score = 38 (18.4 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 272 ATDVQHESLEHFKSHWIKGEPVIITNVLDYSSGLSW 307
A V+ + LE K W+K T +++Y L W
Sbjct: 56 AVYVEFDDLEWDKREWVKVYEDFSTFLVEYH--LIW 89
Score = 37 (18.1 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 458 AKVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHS 501
+K Y + Q +L K + R F+P+ R T + S
Sbjct: 658 SKATYVNSQATGERRLANKIEHELSRCSFHPIPTRSSTLETTKS 701
>MGI|MGI:1918614 [details] [associations]
symbol:Jmjd1c "jumonji domain containing 1C" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 MGI:MGI:1918614
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 GeneTree:ENSGT00530000063039 CTD:221037
eggNOG:NOG305537 HOVERGEN:HBG079631 KO:K11449 OrthoDB:EOG447FS9
ChiTaRS:JMJD1C EMBL:AK173162 EMBL:AC155712 EMBL:AC156272
EMBL:AK077400 EMBL:AK082106 EMBL:AK085500 EMBL:BC068318
IPI:IPI00749954 RefSeq:NP_001229325.1 UniGene:Mm.23846
IntAct:Q69ZK6 STRING:Q69ZK6 PhosphoSite:Q69ZK6 PRIDE:Q69ZK6
Ensembl:ENSMUST00000173689 GeneID:108829 KEGG:mmu:108829
UCSC:uc007fls.2 UCSC:uc011xfo.1 HOGENOM:HOG000113130
InParanoid:Q69ZK6 NextBio:361361 Bgee:Q69ZK6 CleanEx:MM_JMJD1C
Genevestigator:Q69ZK6 GermOnline:ENSMUSG00000037876 Uniprot:Q69ZK6
Length = 2350
Score = 236 (88.1 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 52/129 (40%), Positives = 79/129 (61%)
Query: 526 GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEF 585
GALW I+ +DV K+ E+L+ KE + + P PI DQ++Y+N +++L EE+
Sbjct: 2198 GALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNRKLRQRLLEEY 2253
Query: 586 GVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRTLPRN 645
GV + +Q LG+A+++PAG HQV+N SC ++ DFVSPE++ + LT E R L +
Sbjct: 2254 GVRACTLIQFLGDAIVLPAGTLHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLL-KE 2312
Query: 646 HRAKKDKLQ 654
DKLQ
Sbjct: 2313 EINYDDKLQ 2321
Score = 204 (76.9 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 54/177 (30%), Positives = 83/177 (46%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
FK W +G+P +++ V + W+ S G + ++C D
Sbjct: 1992 FKECWKQGQPAVVSGVHKKMNISLWK-------AESISLDFGDHQ--ADLLNCKDSIVSN 2042
Query: 343 INTYQFFKAYME-GRTHSNSW--PVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTH 399
N +F+ + E + N V+LKLKD P F+ +P +F+ LP +Y +
Sbjct: 2043 ANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEYCN 2102
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMH 456
P G N+A+ LP F++PDLGP+ AYGVA T LH + SD VNVL++
Sbjct: 2103 P-EGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVY 2158
Score = 43 (20.2 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 4 EAIAKSCPFCCRNCNCNACL--HNSEIVKVTRD--LGAPAKTVENIGH-FKYLL 52
EA + + CR C ACL + ++ K +RD L A K V+ H K+L+
Sbjct: 1661 EATLFNVHWVCRKCGFVACLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLM 1714
Score = 41 (19.5 bits), Expect = 2.5e-30, Sum P(3) = 2.5e-30
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 102 FDYYRSCPRCSYDLCLTC 119
F+ + C +C + CL C
Sbjct: 1665 FNVHWVCRKCGFVACLDC 1682
Score = 39 (18.8 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 277 HESLEHFKSHWIKGEPVIITNVLDYSSG 304
H SLE +S + P +T V+ ++G
Sbjct: 1025 HHSLERKESSYSSLSPPTLTPVMPVNAG 1052
>UNIPROTKB|F1MBI2 [details] [associations]
symbol:HR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0016604 OMA:LERAPFW
GeneTree:ENSGT00530000063039 EMBL:DAAA02023404 IPI:IPI00687527
Ensembl:ENSBTAT00000015967 Uniprot:F1MBI2
Length = 1186
Score = 176 (67.0 bits), Expect = 9.2e-18, Sum P(4) = 9.2e-18
Identities = 42/138 (30%), Positives = 69/138 (50%)
Query: 510 ISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQ 569
+S + L G +W +FR +D ++ +L+ + C + P
Sbjct: 1032 LSGLDGEGLWSPGSQVSTVWHVFRAQDAQRIRRFLQ--------MVCPTGAGNLEPGTPG 1083
Query: 570 TFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENI 629
YL+ +++L+EE+GV W+ +Q GEAVL+PAG PHQV+ L+S + F+SPE
Sbjct: 1084 RCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQCLVSTVSVTQHFLSPETS 1143
Query: 630 NECIRLTDEFRTLPRNHR 647
+L + +LP HR
Sbjct: 1144 ALSAQLCHQGPSLPTAHR 1161
Score = 97 (39.2 bits), Expect = 9.2e-18, Sum P(4) = 9.2e-18
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 392 LPYKDYTHPYSGILNIATKLPPD-FLKPDLGPKAYIAYGVAEELGRGDSVTKLHC-DMSD 449
LP +Y + G LN+A+ LPP L+P L P+ + AYGV+ RG TK C +++D
Sbjct: 954 LPLPEYC-AHHGKLNLASYLPPGPVLRP-LEPQLWAAYGVSPH--RGHLGTKNLCVEVTD 1009
Query: 450 AVNVLMH 456
V+VL+H
Sbjct: 1010 LVSVLVH 1016
Score = 66 (28.3 bits), Expect = 9.2e-18, Sum P(4) = 9.2e-18
Identities = 23/87 (26%), Positives = 33/87 (37%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDR-GKAYLHGGESLPLPSGKKS 160
F+ + CPRCS+ LC+ C R G + ++ G+ H SL L S
Sbjct: 601 FNTHWRCPRCSHRLCVACGRMAGAGRTREKAGSQGQSTEKCGQEVGHSASSLMLTQFVSS 660
Query: 161 GIRFSSKKRMRKISQW-KARENGDIPC 186
M ++ W K G PC
Sbjct: 661 QALAELSAAMHQV--WVKFDIRGHCPC 685
Score = 56 (24.8 bits), Expect = 9.2e-18, Sum P(4) = 9.2e-18
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSW 307
F+ HW +G+PV+++ + G W
Sbjct: 859 FQEHWRQGQPVLVSGIQRTLQGHLW 883
>UNIPROTKB|O43593 [details] [associations]
symbol:HR "Protein hairless" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0051291 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0043433 GO:GO:0016604
GO:GO:0000118 EMBL:AF039196 EMBL:AJ277249 EMBL:AJ277250
EMBL:AJ277251 EMBL:AJ277252 EMBL:AJ277253 EMBL:AJ400825
EMBL:AJ400826 EMBL:AJ400827 EMBL:AJ400828 EMBL:AJ400829
EMBL:AJ400830 EMBL:AJ400831 EMBL:AJ400832 EMBL:AJ400833
EMBL:AJ400834 EMBL:AJ400835 EMBL:AJ400836 EMBL:AJ400837
EMBL:AJ277165 EMBL:BC067128 IPI:IPI00216544 IPI:IPI00292057
RefSeq:NP_005135.2 RefSeq:NP_060881.2 UniGene:Hs.272367
ProteinModelPortal:O43593 SMR:O43593 IntAct:O43593 MINT:MINT-269712
STRING:O43593 PhosphoSite:O43593 PaxDb:O43593 PRIDE:O43593
Ensembl:ENST00000312841 Ensembl:ENST00000381418 GeneID:55806
KEGG:hsa:55806 UCSC:uc003xas.3 UCSC:uc003xat.3 CTD:55806
GeneCards:GC08M022028 HGNC:HGNC:5172 MIM:146550 MIM:203655
MIM:209500 MIM:602302 neXtProt:NX_O43593 Orphanet:701
Orphanet:86819 Orphanet:444 PharmGKB:PA29443 eggNOG:NOG243648
HOGENOM:HOG000293150 HOVERGEN:HBG000171 InParanoid:O43593
OMA:LERAPFW OrthoDB:EOG4DBTCW PhylomeDB:O43593 GenomeRNAi:55806
NextBio:60959 ArrayExpress:O43593 Bgee:O43593 CleanEx:HS_HR
Genevestigator:O43593 GermOnline:ENSG00000168453 Uniprot:O43593
Length = 1189
Score = 174 (66.3 bits), Expect = 3.9e-17, Sum P(4) = 3.9e-17
Identities = 40/134 (29%), Positives = 68/134 (50%)
Query: 510 ISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQ 569
+S + L G +W +FR +D ++ +L+ + C + P
Sbjct: 1035 LSGLDGEGLWSPGSQVSTVWHVFRAQDAQRIRRFLQ--------MVCPAGAGALEPGAPG 1086
Query: 570 TFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENI 629
+ YL+ +++L+EE+GV W+ +Q GEAVL+PAG PHQV+ L+S + F+SPE
Sbjct: 1087 SCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETS 1146
Query: 630 NECIRLTDEFRTLP 643
+L + +LP
Sbjct: 1147 ALSAQLCHQGPSLP 1160
Score = 94 (38.1 bits), Expect = 3.9e-17, Sum P(4) = 3.9e-17
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 392 LPYKDYTHPYSGILNIATKLPPDF-LKPDLGPKAYIAYGVAEELGRGDSVTKLHC-DMSD 449
LP +Y + G LN+A+ LPP L+P L P+ + AYGV+ RG TK C +++D
Sbjct: 957 LPLPEYCALH-GKLNLASYLPPGLALRP-LEPQLWAAYGVSPH--RGHLGTKNLCVEVAD 1012
Query: 450 AVNVLMH 456
V++L+H
Sbjct: 1013 LVSILVH 1019
Score = 65 (27.9 bits), Expect = 3.9e-17, Sum P(4) = 3.9e-17
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 86 VPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCCR 121
+P+ R + LF N ++R CPRCS+ LC+ C R
Sbjct: 596 IPRCCSRCHHGLF-NT--HWR-CPRCSHRLCVACGR 627
Score = 56 (24.8 bits), Expect = 3.9e-17, Sum P(4) = 3.9e-17
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSW 307
F+ HW +G+PV+++ + G W
Sbjct: 862 FQEHWRQGQPVLVSGIQRTLQGNLW 886
>RGD|620634 [details] [associations]
symbol:Hr "hair growth associated" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA;ISO] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IDA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046966 "thyroid hormone receptor binding" evidence=IPI]
[GO:0051291 "protein heterooligomerization" evidence=IDA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:620634 GO:GO:0003714 GO:GO:0045892 GO:GO:0051291 GO:GO:0046872
GO:GO:0003677 GO:GO:0006351 GO:GO:0043433 GO:GO:0042826
GO:GO:0016604 GO:GO:0000118 CTD:55806 eggNOG:NOG243648
HOGENOM:HOG000293150 HOVERGEN:HBG000171 OrthoDB:EOG4DBTCW
EMBL:U71293 IPI:IPI00230844 RefSeq:NP_077340.2 UniGene:Rn.41543
ProteinModelPortal:P97609 STRING:P97609 PRIDE:P97609 GeneID:60563
KEGG:rno:60563 UCSC:RGD:620634 InParanoid:P97609 NextBio:612242
Genevestigator:P97609 GermOnline:ENSRNOG00000011427 Uniprot:P97609
Length = 1181
Score = 187 (70.9 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 42/138 (30%), Positives = 71/138 (51%)
Query: 510 ISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQ 569
+S + L G +W +FR +D ++ +L+ + C + P
Sbjct: 1027 LSGLDGEGLWSPGSQTSTVWHVFRAQDAQRIRRFLQ--------MVCPAGAGTLEPGAPG 1078
Query: 570 TFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENI 629
+ YL+ +++L+EE+GV W+ +Q GEAVL+PAG PHQV+ L+S + F+SPE
Sbjct: 1079 SCYLDSGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETS 1138
Query: 630 NECIRLTDEFRTLPRNHR 647
+L + +LP +HR
Sbjct: 1139 ALSAQLCHQGASLPPDHR 1156
Score = 100 (40.3 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCE-V 341
F+ HW +G+PV++ SG+ + + +S + + G Q V+T+ L +
Sbjct: 854 FQEHWRQGQPVLV-------SGIQ-KTLRLSLWGMEALGTLGGQ---VQTLTALGPPQPT 902
Query: 342 KINTYQFFKAYM--EGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTH 399
+++ F+K + E R + V+L + P E R+ + LP +Y
Sbjct: 903 SLDSTAFWKGFSHPEARPKLDEGSVLLLHR--PLGDKDESRVE----NLASSLPLPEYC- 955
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHC-DMSDAVNVLMH 456
+ G LN+A+ LP L P+ + AYGV RG TK C ++SD +++L+H
Sbjct: 956 AHQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCVEVSDLISILVH 1011
Score = 51 (23.0 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 86 VPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCCR 121
+P R + LF N ++R C CS+ LC+ C R
Sbjct: 590 IPHCCSRCHHGLF-NT--HWR-CSHCSHRLCVACGR 621
>UNIPROTKB|F1RMB8 [details] [associations]
symbol:HR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0016604 OMA:LERAPFW
GeneTree:ENSGT00530000063039 EMBL:CT827951
Ensembl:ENSSSCT00000010539 ArrayExpress:F1RMB8 Uniprot:F1RMB8
Length = 1177
Score = 174 (66.3 bits), Expect = 4.8e-16, Sum P(4) = 4.8e-16
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 510 ISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQ 569
+S + L G +W +FR +D ++ +L+ + C + P
Sbjct: 1023 LSGLDGEGLWSPGSQVSTVWHVFRAQDTQRIRRFLQ--------MVCPAGAGNLEPGTPG 1074
Query: 570 TFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENI 629
+ YL+ +++L+EE+GV W+ +Q GEAVL+PAG PHQV+ L+S I F+SPE
Sbjct: 1075 SCYLDARLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSITQHFLSPETS 1134
Query: 630 NECIRLTDEFRTLPRNHR 647
+L + +LP + R
Sbjct: 1135 ALSTQLCHQGPSLPPDCR 1152
Score = 81 (33.6 bits), Expect = 4.8e-16, Sum P(4) = 4.8e-16
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 392 LPYKDYTHPYSGILNIATKLPPD-FLKPDLGPKAYIAYGVAEELGRGDSVTKLHC-DMSD 449
LP +Y + G LN+A+ LPP L+P L P+ + AYGV+ G TK C +++D
Sbjct: 945 LPLPEYC-AHHGKLNLASYLPPGPGLRP-LVPQLWAAYGVSPHCGHLG--TKNLCVEVTD 1000
Query: 450 AVNVLM 455
V+VL+
Sbjct: 1001 LVSVLV 1006
Score = 67 (28.6 bits), Expect = 4.8e-16, Sum P(4) = 4.8e-16
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 90 VLRSNERLFCNNFDYYRSCPRCSYDLCLTCCR 121
+LR R F+ + CPRCS+ LC+ C R
Sbjct: 592 ILRCCSRCHHGLFNTHWRCPRCSHRLCVACGR 623
Score = 56 (24.8 bits), Expect = 4.8e-16, Sum P(4) = 4.8e-16
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWE 308
F+ HW +G+PV+++ + WE
Sbjct: 850 FQEHWRQGQPVLVSGIQKTLQSHLWE 875
Score = 40 (19.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 372 PPSCLFEERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKA 424
P SCL EE P A + L + + A K PPD +G A
Sbjct: 394 PDSCLGEEESP---ATQLRALKRASSPGVQGAVDSPAAKRPPDPFPGSVGQGA 443
>MGI|MGI:96223 [details] [associations]
symbol:Hr "hairless" species:10090 "Mus musculus" [GO:0000118
"histone deacetylase complex" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IDA] [GO:0042809 "vitamin D
receptor binding" evidence=ISO] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:96223 GO:GO:0003714 GO:GO:0045892
GO:GO:0051291 GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
GO:GO:0043433 GO:GO:0016604 GO:GO:0000118 CTD:55806
eggNOG:NOG243648 HOGENOM:HOG000293150 HOVERGEN:HBG000171
OrthoDB:EOG4DBTCW EMBL:Z32675 EMBL:BC049182 IPI:IPI00123616
PIR:I48378 RefSeq:NP_068677.2 UniGene:Mm.7598
ProteinModelPortal:Q61645 SMR:Q61645 STRING:Q61645
PhosphoSite:Q61645 PRIDE:Q61645 Ensembl:ENSMUST00000022691
Ensembl:ENSMUST00000161069 GeneID:15460 KEGG:mmu:15460
UCSC:uc007uoj.1 GeneTree:ENSGT00530000063039 InParanoid:Q61645
ChiTaRS:HR NextBio:288274 Bgee:Q61645 CleanEx:MM_HR
Genevestigator:Q61645 GermOnline:ENSMUSG00000022096 Uniprot:Q61645
Length = 1182
Score = 186 (70.5 bits), Expect = 4.9e-16, Sum P(3) = 4.9e-16
Identities = 42/138 (30%), Positives = 71/138 (51%)
Query: 510 ISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQ 569
+S + L G +W +FR +D ++ +L+ + C + P
Sbjct: 1028 LSGLDGEGLWSPGSQTSTVWHVFRAQDAQRIRRFLQ--------MVCPAGAGTLEPGAPG 1079
Query: 570 TFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENI 629
+ YL+ +++L+EE+GV W+ +Q GEAVL+PAG PHQV+ L+S + F+SPE
Sbjct: 1080 SCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETS 1139
Query: 630 NECIRLTDEFRTLPRNHR 647
+L + +LP +HR
Sbjct: 1140 ALSAQLYHQGASLPPDHR 1157
Score = 98 (39.6 bits), Expect = 4.9e-16, Sum P(3) = 4.9e-16
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ HW +G+PV++ SG+ + + +S + + G Q V+T+ L +
Sbjct: 855 FQEHWRQGQPVLV-------SGIQ-KTLRLSLWGMEALGTLGGQ---VQTLTALGPPQP- 902
Query: 343 INTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNI---LPYKDYTH 399
T A+ EG +H + P KL + L + N+ LP +Y
Sbjct: 903 --TNLDSTAFWEGFSHPETRP---KLDEGSVLLLHRTLGDKDASRVQNLASSLPLPEYC- 956
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHC-DMSDAVNVLMH 456
+ G LN+A+ LP L P+ + AYGV RG TK C ++SD +++L+H
Sbjct: 957 AHQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCVEVSDLISILVH 1012
Score = 51 (23.0 bits), Expect = 4.9e-16, Sum P(3) = 4.9e-16
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 86 VPQVVLRSNERLFCNNFDYYRSCPRCSYDLCLTCCR 121
+P R + LF N ++R C CS+ LC+ C R
Sbjct: 591 IPHCCSRCHHGLF-NT--HWR-CSHCSHRLCVACGR 622
>UNIPROTKB|F1PFJ6 [details] [associations]
symbol:HR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 GO:GO:0003714 GO:GO:0045892
GO:GO:0016604 CTD:55806 OMA:LERAPFW GeneTree:ENSGT00530000063039
EMBL:AAEX03014381 RefSeq:XP_543256.3 Ensembl:ENSCAFT00000015345
GeneID:486130 KEGG:cfa:486130 NextBio:20859967 Uniprot:F1PFJ6
Length = 1184
Score = 163 (62.4 bits), Expect = 4.8e-15, Sum P(4) = 4.8e-15
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 510 ISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQ 569
+S + L G +W +FR +D ++ +L+ + C + P
Sbjct: 1030 LSGLDGEGLWSPGSQVSTVWHVFRAQDAQRIRRFLQ--------MVCPAGAGNLEPGTPG 1081
Query: 570 TFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPE 627
YL+ +++L+EE+GV W+ +Q GEAVL+PAG PHQV+ L++ + F+SPE
Sbjct: 1082 CCYLDAGLRRRLREEWGVNCWTLLQAPGEAVLVPAGAPHQVQGLVNTVSVTQHFLSPE 1139
Score = 85 (35.0 bits), Expect = 4.8e-15, Sum P(4) = 4.8e-15
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 392 LPYKDYTHPYSGILNIATKLPPD-FLKPDLGPKAYIAYGVAEELGRGDSVTKLHC-DMSD 449
LP +Y G LN+A+ LPP L+P L P+ + AYGV+ RG TK C +++D
Sbjct: 952 LPLPEYC-ALRGKLNLASYLPPGPALRP-LEPQLWAAYGVSPH--RGHLGTKNLCVEVTD 1007
Query: 450 AVNVLM 455
V+VL+
Sbjct: 1008 LVSVLV 1013
Score = 64 (27.6 bits), Expect = 4.8e-15, Sum P(4) = 4.8e-15
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 90 VLRSNERLFCNNFDYYRSCPRCSYDLCLTCCR 121
VLR R F+ + CP CS+ LC+ C R
Sbjct: 593 VLRCCSRCHRGLFNTHWKCPHCSHRLCVACGR 624
Score = 57 (25.1 bits), Expect = 4.8e-15, Sum P(4) = 4.8e-15
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSW 307
F+ HW +G+PV+++ + G W
Sbjct: 857 FQEHWRQGQPVLVSGIQRTLQGSLW 881
>RGD|708458 [details] [associations]
symbol:Jmjd1c "jumonji domain containing 1C" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 RGD:708458 eggNOG:NOG305537
OrthoDB:EOG447FS9 HOGENOM:HOG000113130 EMBL:AF202265
IPI:IPI01016516 UniGene:Rn.99017 ProteinModelPortal:Q9QXL6
STRING:Q9QXL6 UCSC:RGD:708458 Genevestigator:Q9QXL6 Uniprot:Q9QXL6
Length = 122
Score = 189 (71.6 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 39/90 (43%), Positives = 57/90 (63%)
Query: 565 PIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFV 624
P+ DQ +Y+N ++ L EE+GV + VQ LG+A+++PAG HQV+N SC ++ DFV
Sbjct: 5 PVRDQGWYVNRRPRQGLLEEYGVRACTLVQFLGDAIVLPAGTLHQVQNFHSCIQVTEDFV 64
Query: 625 SPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
SPE++ + LT E R L + DKLQ
Sbjct: 65 SPEHLVQSFHLTQELRLL-KEEINYDDKLQ 93
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 654 636 0.00092 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 627 (67 KB)
Total size of DFA: 400 KB (2193 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 52.90u 0.11s 53.01t Elapsed: 00:00:03
Total cpu time: 52.91u 0.11s 53.02t Elapsed: 00:00:03
Start: Fri May 10 15:05:35 2013 End: Fri May 10 15:05:38 2013