BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039227
(654 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7LBC6|KDM3B_HUMAN Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=2
Length = 1761
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 192/378 (50%), Gaps = 53/378 (14%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PV+++ V W+P S+ D +V +C + +VK
Sbjct: 1405 FRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVD------LVNCRNCAIISDVK 1458
Query: 343 INTY-QFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPY 401
+ + F+ + + P++LKLKDWPP F + +P + M LP +YT
Sbjct: 1459 VRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-R 1517
Query: 402 SGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVD 461
G LN+A++LP F++PDLGPK Y AYG+ R T LH D+SDAVNV++
Sbjct: 1518 DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMV------ 1571
Query: 462 YSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSL- 520
Y + E + EE L+ I ++ ++
Sbjct: 1572 YVGIPIGE------------------------------GAHDEEVLKTIDEGDADEVTKQ 1601
Query: 521 ---NGKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMY 576
+GK+ GALW I+ +D K+ E LR +E +P + PIHDQ++YL+
Sbjct: 1602 RIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEE--QGQENPPDH--DPIHDQSWYLDQT 1657
Query: 577 HKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLT 636
+K+L EE+GV+ W+ VQ LG+AV IPAG PHQV NL SC K+A DFVSPE++ C RLT
Sbjct: 1658 LRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLT 1717
Query: 637 DEFRTLPRNHRAKKDKLQ 654
EFR L H +DKLQ
Sbjct: 1718 QEFRHLSNTHTNHEDKLQ 1735
>sp|Q6ZPY7|KDM3B_MOUSE Lysine-specific demethylase 3B OS=Mus musculus GN=Kdm3b PE=1 SV=2
Length = 1562
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 193/378 (51%), Gaps = 53/378 (14%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PV+++ V W+P S+ D +V +C + +VK
Sbjct: 1206 FRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQDVD------LVNCRNCAIISDVK 1259
Query: 343 I-NTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPY 401
+ + + F+ + + P++LKLKDWPP F + +P + M LP +YT
Sbjct: 1260 VRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-R 1318
Query: 402 SGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVD 461
G LN+A++LP F++PDLGPK Y AYG+ R T LH D+SDAVNV++
Sbjct: 1319 DGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMV------ 1372
Query: 462 YSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSL- 520
Y V E + EE L+ I ++ ++
Sbjct: 1373 YVGIPVGE------------------------------GAHDEEVLKTIDEGDADEVTKQ 1402
Query: 521 ---NGKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMY 576
+GK+ GALW I+ +D K+ E LR +E +P + PIHDQ++YL+
Sbjct: 1403 RIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEE--QGQENPPDH--DPIHDQSWYLDQI 1458
Query: 577 HKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLT 636
+K+L EE+GV+ W+ VQ LG+AV IPAG PHQV NL SC K+A DFVSPE++ C RLT
Sbjct: 1459 LRKRLFEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLT 1518
Query: 637 DEFRTLPRNHRAKKDKLQ 654
EFR L H +DKLQ
Sbjct: 1519 QEFRHLSNTHTNHEDKLQ 1536
>sp|Q5ZIX8|KDM3A_CHICK Lysine-specific demethylase 3A OS=Gallus gallus GN=KDM3A PE=2 SV=1
Length = 1325
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 195/397 (49%), Gaps = 54/397 (13%)
Query: 264 DNYLYCPSATDVQHES-LEHFKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYS 322
DN L C D +ES F+ W +G+PV+++ V + W P S+
Sbjct: 951 DNRLLC--LQDPNNESNWNVFRECWKQGQPVMVSGVHHKLNADLWRP---------ESFR 999
Query: 323 KGSQKLVVKTVDCLDLCEVKINTYQFFKAYMEG-----RTHSNSWPVILKLKDWPPSCLF 377
K + V V+C + T F E RT P++LKLKDWPP F
Sbjct: 1000 KEFGQQEVDLVNCRTNEIITGATVGDFWDGFEDISSRLRTEEGE-PMVLKLKDWPPGEDF 1058
Query: 378 EERLPCHGAEFMNILPYKDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRG 437
+ +P + M +P +YT G LN+A++LP F++PDLGPK Y AYG+ R
Sbjct: 1059 RDMMPSRFDDLMKNIPLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRK 1117
Query: 438 DSVTKLHCDMSDAVNVLMHTAKVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFD 497
T LH D+SDA NV+++ + Q E+ K IQD DE
Sbjct: 1118 YGTTNLHLDVSDAANVMVYVGIPKGQADQEEEVLK-----TIQDGDS--------DELTI 1164
Query: 498 MNHSKSEEKLRPISSMQSNTLSLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCS 557
++S EK GALW I+ +D K+ E+L+ +E +
Sbjct: 1165 KRFTESREK------------------PGALWHIYAAKDTEKIREFLKKVAEE--QGQEN 1204
Query: 558 PVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCT 617
PV+ PIHDQ++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC
Sbjct: 1205 PVDH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCI 1262
Query: 618 KIALDFVSPENINECIRLTDEFRTLPRNHRAKKDKLQ 654
K+A DFVSPE++ C LT EFR L H +DKLQ
Sbjct: 1263 KVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQ 1299
>sp|Q9Y4C1|KDM3A_HUMAN Lysine-specific demethylase 3A OS=Homo sapiens GN=KDM3A PE=1 SV=4
Length = 1321
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 188/375 (50%), Gaps = 48/375 (12%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDC-LDLCEV 341
F+ W +G+PV+++ V + W+P S+ K + V V+C +
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNSELWKP---------ESFRKEFGEQEVDLVNCRTNEIIT 1016
Query: 342 KINTYQFFKAY--MEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTH 399
F+ + + R + P++LKLKDWPP F + +P + M +P +YT
Sbjct: 1017 GATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR 1076
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAK 459
G LN+A++LP F++PDLGPK Y AYG+ R T LH D+SDA NV+++
Sbjct: 1077 -RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGI 1135
Query: 460 VDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLS 519
+Q E+ K IQD DE + +EK
Sbjct: 1136 PKGQCEQEEEVLK-----TIQDGDS--------DELTIKRFIEGKEK------------- 1169
Query: 520 LNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKK 579
GALW I+ +D K+ E+L+ +E +P + PIHDQ++YL+ +K
Sbjct: 1170 -----PGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRK 1220
Query: 580 KLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEF 639
+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC K+A DFVSPE++ C LT EF
Sbjct: 1221 RLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEF 1280
Query: 640 RTLPRNHRAKKDKLQ 654
R L + H +DKLQ
Sbjct: 1281 RYLSQTHTNHEDKLQ 1295
Score = 37.0 bits (84), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESL 152
F+ + CPRC + +C+ C R R C QG S K+ +H E+L
Sbjct: 670 FNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWLKCVKSQIHEPENL 720
>sp|Q6IRB8|KD3AA_XENLA Lysine-specific demethylase 3A-A OS=Xenopus laevis GN=kdm3a-a PE=2
SV=1
Length = 1331
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 189/377 (50%), Gaps = 51/377 (13%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PVI++ + + + W P R D + + + +T D + V
Sbjct: 975 FRECWKQGQPVIVSGIHNNLNSELWRPESFRREFGD----QEADLVNCRTNDIITGATVG 1030
Query: 343 INTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYS 402
+ ++ F+ + ++LKLKDWPP F + + + MN +P +YT
Sbjct: 1031 -DFWEGFEDISARLKNDKGEAMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-RE 1088
Query: 403 GILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAKVDY 462
G LN+A +LP F++PDLGPK Y AYG+ R T LH D+SDA NV+++
Sbjct: 1089 GKLNLAARLPAYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDATNVMVYVG---- 1144
Query: 463 SSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSLN- 521
I K + H + +E +R I ++ L++
Sbjct: 1145 -------IPKGE-------------------------HDQEQEVIRTIQDGDADELTIKR 1172
Query: 522 ----GKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYH 577
+ GALW IF +D K+ ++L+ +E H +P + PIHDQ++YL+
Sbjct: 1173 YIEFKEKPGALWHIFAAKDTEKIRQFLKKVAEEQGHE--NPPDH--DPIHDQSWYLDNTL 1228
Query: 578 KKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTD 637
+K+L +E GV+ W+ VQ LG+AV IPAG PHQV NL SC K+A DFVSPE++ C LT
Sbjct: 1229 RKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQ 1288
Query: 638 EFRTLPRNHRAKKDKLQ 654
EFR L H +DKLQ
Sbjct: 1289 EFRYLSHTHTNHEDKLQ 1305
>sp|Q63679|KDM3A_RAT Lysine-specific demethylase 3A OS=Rattus norvegicus GN=Kdm3a PE=2
SV=1
Length = 1214
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 189/385 (49%), Gaps = 66/385 (17%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PV+++ V + W+P + G Q+ VD ++ +
Sbjct: 850 FRECWKQGQPVMVSGVHHKLNTELWKPESFRKEF-------GEQE-----VDLVNCRTNE 897
Query: 343 INTYQFFKAYMEG--------RTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPY 394
I T + +G + P++LKLKDWPP F + +P + M +P
Sbjct: 898 IITGATVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPL 957
Query: 395 KDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVL 454
+YT G LN+A++LP F++PDLGPK Y AYG+ R T LH D+SDA NV+
Sbjct: 958 PEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVM 1016
Query: 455 MHTAKVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQ 514
++ +Q EE LR I
Sbjct: 1017 VYVGIPKGQCEQ------------------------------------EEEVLRTIQDGD 1040
Query: 515 SNTLSL----NGKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQ 569
S+ L++ GK+ GALW I+ +D K+ E+L+ +E +P + PIHDQ
Sbjct: 1041 SDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQ 1096
Query: 570 TFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENI 629
++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC K+A DFVSPE++
Sbjct: 1097 SWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHV 1156
Query: 630 NECIRLTDEFRTLPRNHRAKKDKLQ 654
C LT EFR L + H +DKLQ
Sbjct: 1157 KHCFWLTQEFRHLSQTHTNHEDKLQ 1181
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESL 152
F+ + CPRC + +C+ C R R C QG S K+ +H E+L
Sbjct: 554 FNLHWVCPRCGFGVCVDCYRLKRKNCQQGAAYKTFSWIRCVKSQIHEPENL 604
>sp|Q6PCM1|KDM3A_MOUSE Lysine-specific demethylase 3A OS=Mus musculus GN=Kdm3a PE=1 SV=1
Length = 1323
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 189/385 (49%), Gaps = 66/385 (17%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PV+++ V + W+P + G Q+ VD ++ +
Sbjct: 966 FRECWKQGQPVMVSGVHHKLNTELWKPESFRKEF-------GEQE-----VDLVNCRTNE 1013
Query: 343 INTYQFFKAYMEG--------RTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPY 394
I T + +G + P++LKLKDWPP F + +P + M +P
Sbjct: 1014 IITGATVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPL 1073
Query: 395 KDYTHPYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVL 454
+YT G LN+A++LP F++PDLGPK Y AYG+ R T LH D+SDA NV+
Sbjct: 1074 PEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVM 1132
Query: 455 MHTAKVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQ 514
++ +Q EE LR I
Sbjct: 1133 VYVGIPKGQCEQ------------------------------------EEEVLRTIQDGD 1156
Query: 515 SNTLSL----NGKDG-GALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQ 569
S+ L++ GK+ GALW I+ +D K+ E+L+ +E +P + PIHDQ
Sbjct: 1157 SDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEE--QGQDNPADH--DPIHDQ 1212
Query: 570 TFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENI 629
++YL+ +K+L +E+GV+ W+ VQ LG+ V IPAG PHQV NL SC K+A DFVSPE++
Sbjct: 1213 SWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHV 1272
Query: 630 NECIRLTDEFRTLPRNHRAKKDKLQ 654
C LT EFR L + H +DKLQ
Sbjct: 1273 KHCFWLTQEFRYLSQTHTNHEDKLQ 1297
Score = 36.2 bits (82), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 102 FDYYRSCPRCSYDLCLTCCREIRDGCLQGGVNMYTSHFDRGKAYLHGGESL 152
F+ + CPRC + +C+ C R R C QG S K+ +H E+L
Sbjct: 670 FNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWIRCVKSQIHEPENL 720
>sp|Q5HZN1|KD3AB_XENLA Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-b PE=2
SV=1
Length = 1334
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 192/380 (50%), Gaps = 57/380 (15%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ W +G+PV+++ V + + W P R D + + + +T D + V
Sbjct: 978 FRECWKQGQPVMVSGVHNNLNSELWRPESFRREFGD----QEADLVNCRTNDIITGATVG 1033
Query: 343 INTYQFFKAY--MEGRTHSNSW-PVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTH 399
F+ + + GR +++ ++LKLKDWPP F + + + MN +P +YT
Sbjct: 1034 ----DFWDGFEDIPGRLKNDTGESMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR 1089
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAK 459
G LN+A +LP F++PDLGPK Y AYG+ R T LH D+SDA NV+++
Sbjct: 1090 -REGKLNLAARLPTYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG- 1147
Query: 460 VDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLS 519
I K + H + +E LR I ++ L+
Sbjct: 1148 ----------IPKGE-------------------------HDQDQEVLRTIQDGDADELT 1172
Query: 520 LN-----GKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLN 574
+ + GALW I+ +D K+ ++L+ +E H +P + PIHDQ++YL+
Sbjct: 1173 IKRFIEFKEKPGALWHIYAAKDTEKIRQFLKKVAEEEGHE--NPPDH--DPIHDQSWYLD 1228
Query: 575 MYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIR 634
+K+L +E GV+ W+ VQ LG+AV IPAG PHQV NL SC K+A DFVSPE++ C
Sbjct: 1229 NILRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFC 1288
Query: 635 LTDEFRTLPRNHRAKKDKLQ 654
LT EFR L H +DKLQ
Sbjct: 1289 LTQEFRYLSHTHTNHEDKLQ 1308
>sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C
OS=Homo sapiens GN=JMJD1C PE=1 SV=2
Length = 2540
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 179/375 (47%), Gaps = 48/375 (12%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
FK W +G+P +++ V + W+ +S D ++C D
Sbjct: 2182 FKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQ---------ADLLNCKDSIISN 2232
Query: 343 INTYQFFKAYME---GRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTH 399
N +F+ + E + + + V+LKLKDWP F+ +P + + LP +Y +
Sbjct: 2233 ANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCN 2292
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAK 459
P G N+A+ LP F++PDLGP+ AYGV T LH ++SD VN+L++
Sbjct: 2293 P-EGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVG- 2350
Query: 460 VDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLS 519
+A+ + K I + E EE L I + L
Sbjct: 2351 -------IAKGNGILSKAGILKKFE-------------------EEDLDDILRKR---LK 2381
Query: 520 LNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKK 579
+ + GALW I+ +DV K+ E+L+ KE + + P PI DQ++Y+N ++
Sbjct: 2382 DSSEIPGALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNKKLRQ 2437
Query: 580 KLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEF 639
+L EE+GV + +Q LG+A+++PAG HQV+N SC ++ DFVSPE++ E LT E
Sbjct: 2438 RLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQEL 2497
Query: 640 RTLPRNHRAKKDKLQ 654
R L + DKLQ
Sbjct: 2498 RLL-KEEINYDDKLQ 2511
>sp|Q69ZK6|JHD2C_MOUSE Probable JmjC domain-containing histone demethylation protein 2C
OS=Mus musculus GN=Jmjd1c PE=1 SV=3
Length = 2350
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 179/375 (47%), Gaps = 48/375 (12%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
FK W +G+P +++ V + W+ +S D ++C D
Sbjct: 1992 FKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQ---------ADLLNCKDSIVSN 2042
Query: 343 INTYQFFKAYME---GRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTH 399
N +F+ + E + + V+LKLKD P F+ +P +F+ LP +Y +
Sbjct: 2043 ANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEYCN 2102
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHCDMSDAVNVLMHTAK 459
P G N+A+ LP F++PDLGP+ AYGVA T LH + SD VNVL++
Sbjct: 2103 P-EGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVYVG- 2160
Query: 460 VDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLS 519
+A+ + K I + E EE+L + + L
Sbjct: 2161 -------IAKGNGVLSKAGILKKFE-------------------EEELDDVLRKR---LK 2191
Query: 520 LNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKK 579
+ + GALW I+ +DV K+ E+L+ KE + + P PI DQ++Y+N ++
Sbjct: 2192 DSSEIPGALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNRKLRQ 2247
Query: 580 KLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEF 639
+L EE+GV + +Q LG+A+++PAG HQV+N SC ++ DFVSPE++ + LT E
Sbjct: 2248 RLLEEYGVRACTLIQFLGDAIVLPAGTLHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQEL 2307
Query: 640 RTLPRNHRAKKDKLQ 654
R L + DKLQ
Sbjct: 2308 RLL-KEEINYDDKLQ 2321
>sp|P97609|HAIR_RAT Protein hairless OS=Rattus norvegicus GN=Hr PE=2 SV=2
Length = 1181
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 158/369 (42%), Gaps = 70/369 (18%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCE-V 341
F+ HW +G+PV+++ + + +S + + G Q V+T+ L +
Sbjct: 854 FQEHWRQGQPVLVSGIQKT--------LRLSLWGMEALGTLGGQ---VQTLTALGPPQPT 902
Query: 342 KINTYQFFKAYM--EGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTH 399
+++ F+K + E R + V+L + P E R+ + LP +Y
Sbjct: 903 SLDSTAFWKGFSHPEARPKLDEGSVLLLHR--PLGDKDESRV----ENLASSLPLPEYCA 956
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHC-DMSDAVNVLMHTA 458
+ G LN+A+ LP L P+ + AYGV RG TK C ++SD +++L+H
Sbjct: 957 -HQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCVEVSDLISILVH-- 1011
Query: 459 KVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTL 518
AE + P Y + F +S + L
Sbjct: 1012 ---------AEAQ--------------LPPWYRAQKDF-------------LSGLDGEGL 1035
Query: 519 SLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHK 578
G +W +FR +D ++ + F + C + P + YL+ +
Sbjct: 1036 WSPGSQTSTVWHVFRAQDAQRI--------RRFLQMVCPAGAGTLEPGAPGSCYLDSGLR 1087
Query: 579 KKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDE 638
++L+EE+GV W+ +Q GEAVL+PAG PHQV+ L+S + F+SPE +L +
Sbjct: 1088 RRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLCHQ 1147
Query: 639 FRTLPRNHR 647
+LP +HR
Sbjct: 1148 GASLPPDHR 1156
>sp|Q61645|HAIR_MOUSE Protein hairless OS=Mus musculus GN=Hr PE=2 SV=2
Length = 1182
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 151/369 (40%), Gaps = 70/369 (18%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ HW +G+PV+++ + + +R + + + + V L
Sbjct: 855 FQEHWRQGQPVLVSGI--------------QKTLRLSLWGMEALGTLGGQVQTLTALGPP 900
Query: 343 INTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNI---LPYKDYTH 399
T A+ EG +H + P KL + L + N+ LP +Y
Sbjct: 901 QPTNLDSTAFWEGFSHPETRP---KLDEGSVLLLHRTLGDKDASRVQNLASSLPLPEYCA 957
Query: 400 PYSGILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHC-DMSDAVNVLMHTA 458
+ G LN+A+ LP L P+ + AYGV RG TK C ++SD +++L+H
Sbjct: 958 -HQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCVEVSDLISILVH-- 1012
Query: 459 KVDYSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTL 518
AE + P Y + F +S + L
Sbjct: 1013 ---------AEAQ--------------LPPWYRAQKDF-------------LSGLDGEGL 1036
Query: 519 SLNGKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHK 578
G +W +FR +D ++ + F + C + P + YL+ +
Sbjct: 1037 WSPGSQTSTVWHVFRAQDAQRI--------RRFLQMVCPAGAGTLEPGAPGSCYLDAGLR 1088
Query: 579 KKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDE 638
++L+EE+GV W+ +Q GEAVL+PAG PHQV+ L+S + F+SPE +L +
Sbjct: 1089 RRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLYHQ 1148
Query: 639 FRTLPRNHR 647
+LP +HR
Sbjct: 1149 GASLPPDHR 1157
>sp|O43593|HAIR_HUMAN Protein hairless OS=Homo sapiens GN=HR PE=1 SV=5
Length = 1189
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 146/364 (40%), Gaps = 64/364 (17%)
Query: 283 FKSHWIKGEPVIITNVLDYSSGLSWEPMVMSRAVRDTSYSKGSQKLVVKTVDCLDLCEVK 342
F+ HW +G+PV+++ + G W + + G Q + + +
Sbjct: 862 FQEHWRQGQPVLVSGIQRTLQGNLWGTEALG--------ALGGQVQALSPLGPPQPSSLG 913
Query: 343 INTYQFFKAYMEGRTHSNSWPVILKLKDWPPSCLFEERLPCHGAEFMNILPYKDYTHPYS 402
T+ ++ E R S+ V+L + L +E LP +Y
Sbjct: 914 STTFWEGFSWPELRPKSDEGSVLLLHR-----ALGDEDT-SRVENLAASLPLPEYCA-LH 966
Query: 403 GILNIATKLPPDFLKPDLGPKAYIAYGVAEELGRGDSVTKLHC-DMSDAVNVLMHTAKVD 461
G LN+A+ LPP L P+ + AYGV+ RG TK C +++D V++L+H
Sbjct: 967 GKLNLASYLPPGLALRPLEPQLWAAYGVSPH--RGHLGTKNLCVEVADLVSILVHA---- 1020
Query: 462 YSSKQVAEIEKLKRKHAIQDRREFFNPLYARDETFDMNHSKSEEKLRPISSMQSNTLSLN 521
D H ++ L S + L
Sbjct: 1021 -------------------------------DTPLPAWHRAQKDFL---SGLDGEGLWSP 1046
Query: 522 GKDGGALWDIFRREDVPKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKL 581
G +W +FR +D ++ + F + C + P + YL+ +++L
Sbjct: 1047 GSQVSTVWHVFRAQDAQRI--------RRFLQMVCPAGAGALEPGAPGSCYLDAGLRRRL 1098
Query: 582 KEEFGVEPWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIRLTDEFRT 641
+EE+GV W+ +Q GEAVL+PAG PHQV+ L+S + F+SPE +L + +
Sbjct: 1099 REEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETSALSAQLCHQGPS 1158
Query: 642 LPRN 645
LP +
Sbjct: 1159 LPPD 1162
>sp|Q08BY5|JMJD4_DANRE JmjC domain-containing protein 4 OS=Danio rerio GN=jmjd4 PE=2 SV=1
Length = 422
Score = 36.6 bits (83), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 538 PKLGEYLRNHHKEFRHVYCSPVEQVVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLG 597
P ++LR+ H + +P+ Q D+ Y E +P +Q+ G
Sbjct: 210 PGQEDFLRDCHGNLAYDVTAPILQ------DKGLYAQF--------EEACQPLEIIQEAG 255
Query: 598 EAVLIPAGCPHQVRNLMSCTKIALDFVSPENINECIR-LTDEFRTLPRNHRAKKDKL 653
E + +P+G HQV NL I ++++ N++ + L DE ++ R +D +
Sbjct: 256 EIIFVPSGWHHQVYNLEDTISINHNWLNGCNLDIMWQFLQDELSSVQREIEEWRDTM 312
>sp|Q5ZHV5|JMJD4_CHICK JmjC domain-containing protein 4 OS=Gallus gallus GN=JMJD4 PE=2
SV=1
Length = 425
Score = 36.2 bits (82), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 589 PWSFVQQLGEAVLIPAGCPHQVRNLMSCTKIALDFVSPEN--INECIRLTDEFRTLPRNH 646
P VQ+ GE V IP+G HQV NL I ++V+ N I C L DE + R
Sbjct: 249 PVEIVQEAGEIVFIPSGWHHQVYNLEDTISINHNWVNGCNVAIMWCF-LQDELAAVQREI 307
Query: 647 RAKKDKL 653
KD +
Sbjct: 308 NEWKDPM 314
>sp|Q8KCJ0|HEM2_CHLTE Delta-aminolevulinic acid dehydratase OS=Chlorobium tepidum (strain
ATCC 49652 / DSM 12025 / TLS) GN=hemB PE=3 SV=1
Length = 328
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 176 WKARENGDIPCPVNKLGGCGHEYLELKCIFANGWLSELKVKAKKLV 221
W+ +E D+P + + G EY +K ANGW+ E +V + L+
Sbjct: 263 WRTKERFDVPVAIYHVSG---EYAMVKAAAANGWIDEERVMMESLL 305
>sp|Q8ZXT6|SYL_PYRAE Leucine--tRNA ligase OS=Pyrobaculum aerophilum (strain ATCC 51768 /
IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=leuS PE=3
SV=1
Length = 945
Score = 33.5 bits (75), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 562 VVHPIHDQTFYLNMYHKKKLKEEFGVEPWSFVQQLGEAVLIPAGCPHQV 610
V+ + D T Y+ Y K +FG++P +++ + V + G P +V
Sbjct: 520 VIESLSDSTIYMAFYTVIKRIRQFGIKPEQLIKEFWDYVFLGVGTPEEV 568
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 251,854,963
Number of Sequences: 539616
Number of extensions: 10961453
Number of successful extensions: 24073
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 23988
Number of HSP's gapped (non-prelim): 65
length of query: 654
length of database: 191,569,459
effective HSP length: 124
effective length of query: 530
effective length of database: 124,657,075
effective search space: 66068249750
effective search space used: 66068249750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)